LOCUS       DATAZA010000001         2659 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1044506, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000001 DATAZA010000000
VERSION     DATAZA010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2659
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1044506"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..330
                     /locus_tag="VHZ56_00005"
     CDS             <1..330
                     /locus_tag="VHZ56_00005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296380.1"
                     /translation="TYGDIVHKVRDGLAEVPWGQRETMDRRSMKPLTLVEALADIYEV
                     VVISTGRVGLNSSLPLFAGTGARLVIVRQPATPATVVAMATTDAAALGFDVIDSVAAS
                     ERQYEVA"
     gene            330..1364
                     /locus_tag="VHZ56_00010"
     CDS             330..1364
                     /locus_tag="VHZ56_00010"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX4296381.1"
                     /translation="MAGLRYAAIRGAFELLWASRLTSLVRRLSRARGVIFTLHRVLPE
                     EPADFSPNAILQVQPDFLEFTIRRIRQLGFDIVDLGEGLRRLETDFPQKRFAVFTFDD
                     AYRDNLKYALPILRRQQCPFTLYVPTAFVDGTGEIWWQALEDIVAAQSALAVTENEET
                     DYLATASLAEKRLAYDTLYARMRAMPEPARVALIRDLAAKYDFDLAAQCRALIMDWSE
                     LRSFAADQLCTLGAHTVHHYELAKLPPEQARAEIAQSLKVMEAQFGRRPVDLSYPIGG
                     PASAGQREYDMASSLGLRSAVTTIPGALYRRNREMLTALPRVSLNGLFQSRRYVDVFA
                     APAVFTLLGR"
     gene            complement(1361..1564)
                     /locus_tag="VHZ56_00015"
     CDS             complement(1361..1564)
                     /locus_tag="VHZ56_00015"
                     /inference="COORDINATES: protein motif:HMM:NF022456.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2842 domain-containing protein"
                     /protein_id="HEX4296382.1"
                     /translation="MTRSTRNLLGLLAILGLLVIYPLAVMEIYASYMMALPWWGAIGV
                     LCVAGLLWFYPASWVVRWMAKPD"
     gene            1641..>2659
                     /locus_tag="VHZ56_00020"
     CDS             1641..>2659
                     /locus_tag="VHZ56_00020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019962516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0016653 - oxidoreductase activity, acting
                     on NAD(P)H, heme protein as acceptor [Evidence IEA];
                     GO_process: GO:0006784 - heme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HEX4296383.1"
                     /translation="MVSLTSAESLPNSVPLDRLRPVRVWLYVVALMVLAMLVVGGITR
                     LTHSGLSITEWEPISGTIPPLNAQDWQLEFDHYKQIPQYQLLNQGMTLDDFKFIFWWE
                     WAHRFLARVIGFVFAVPFLVFLFQRRFSWNLALPLAGLFVLGGLQGLLGWWMVSSGLE
                     TLTAVSQYRLAAHLSAALVLFLALVWVARRLGPARPVPVDAQRGPVILLLCLVFVQII
                     AGAFVAGLDAGQGYNTWPLMDGALLPPGLDALDPWWRNIFENALTVQFIHRTIAYIIV
                     LYAGALFFWKRGAGGFAGANGWLPRIALLILLQACLGITTLLLDVPLPFALGHQALAF
                     MLAGAT"
BASE COUNT          378 a          974 c          824 g          483 t
ORIGIN      
        1 acctacggcg acatcgtcca caaggttcgc gatggactgg ccgaagtgcc gtggggccag
       61 cgcgagacca tggatcgccg gtccatgaag ccgctgaccc tggtcgaggc gctggccgat
      121 atctacgagg tcgtggtcat ctcgaccggg cgcgtcggcc tcaattcgag cctgccgctg
      181 tttgccggaa ccggcgcaag gctggtgatc gtgcgccagc ccgcgacgcc tgcaacggtc
      241 gtggccatgg cgacgaccga tgctgcggcg ctgggcttcg acgtcatcga cagcgtcgcg
      301 gcgtccgagc ggcagtacga agtggcctga tggccggttt gcgttatgcg gccatccgtg
      361 gcgccttcga gctgctgtgg gcgagccggc tcaccagcct cgtccgccgc ctgtcgcggg
      421 cccgcggggt gatcttcacg ctgcatcgcg tgctgcctga agaaccggcc gacttctcgc
      481 ccaatgccat cctgcaggtg cagcccgact tcctcgagtt caccatccgt cgcatccgcc
      541 agctcggctt cgacatcgtc gacctggggg aggggctgcg ccggctcgaa accgacttcc
      601 cgcagaagcg cttcgccgtc ttcaccttcg acgacgccta ccgcgacaac ctcaaatacg
      661 ccctgccgat cctgcggcgc cagcaatgcc cgttcacgct gtacgtgccc accgccttcg
      721 tcgacggcac cggcgagatc tggtggcagg cgctcgagga tatcgtcgcc gcgcagtcgg
      781 cgctcgccgt gaccgagaac gaggaaaccg attacctcgc gaccgccagc ctcgccgaaa
      841 agcggctcgc ctacgacacg ctctacgccc gcatgcgggc catgccggaa ccggcgcgcg
      901 tcgcgctcat ccgcgacctc gcggccaagt acgatttcga cctcgccgcc cagtgccgcg
      961 ccctgatcat ggactggagc gagttgcgca gctttgccgc ggaccagctg tgcacgctgg
     1021 gtgcgcacac cgtccatcac tacgagctcg ccaagctgcc accggagcag gcgcgggccg
     1081 agatcgcgca gtcgctcaag gtcatggaag cgcagttcgg tcgccgcccg gtggacctga
     1141 gctacccgat cggtggacca gcgtccgccg gccagcgcga gtacgacatg gccagctcgc
     1201 tcggcctccg ctcggccgtg accaccatcc ccggcgcgct ctatcgccgc aaccgcgaga
     1261 tgctgacggc gctgcctcgc gtctcgctca acggcctgtt ccagtcgcgc cgctacgtcg
     1321 acgtcttcgc cgctcccgcg gtgttcacgc tgctcggccg ctagtcgggc ttcgccatcc
     1381 agcgcaccac ccagcttgcc gggtagaacc acagcaggcc ggcgacgcac agcaccccga
     1441 tcgcgcccca ccacggcagc gccatcatgt agctggcgta aatctccatc accgccagcg
     1501 ggtagattac cagcagaccg agaatggcca gcaatcccag caaattgcgc gtcgatcggg
     1561 tcatgcctgc ggcactccgg caattgcgcc ggcggcggcg cggggctatc cctcgccgca
     1621 aattttcatc cggtcaacaa gtggtctcgc tcacctccgc cgaatcgctg cccaattccg
     1681 tgccgctgga tcgcctgcgt ccggtgcgcg tctggctgta cgtcgtggcg ctgatggtgc
     1741 tcgccatgct cgtcgtcggc ggcatcaccc ggctcaccca ttcggggctg tcgatcaccg
     1801 aatgggaacc gatctccggc actatcccgc cgctcaacgc gcaggactgg cagctcgagt
     1861 tcgaccacta caagcagatc ccgcaatacc agctgctcaa ccagggcatg acgctggacg
     1921 acttcaagtt catcttctgg tgggagtggg cgcatcgctt cctggcccgc gtcatcggct
     1981 tcgtcttcgc cgtgccgttc ctggtgttcc ttttccagcg ccgcttctcg tggaatctcg
     2041 ctctcccgct cgccggcctg ttcgtgctgg gcggcctgca gggcctgctc ggctggtgga
     2101 tggtctcgtc cgggctcgag acgctgaccg cggtttcgca gtaccggctg gccgcccatc
     2161 tcagcgccgc gctggtgctg ttccttgccc tggtctgggt cgcccgtcgc ctcgggccgg
     2221 cgcgtccggt ccccgtcgat gcccagcgcg gaccggtgat cctgctgctc tgcctggtct
     2281 tcgtgcagat catcgccggc gccttcgtcg ccggcctcga tgccgggcag ggctacaaca
     2341 cctggccgct gatggatggc gcgctgctgc cgcctggcct cgacgcgctc gacccctggt
     2401 ggaggaacat cttcgagaac gcgctgacgg tgcagttcat ccaccgcacc atcgcctaca
     2461 tcatcgtgct ctacgccggc gcgctgttct tctggaagcg cggggcaggg ggctttgccg
     2521 gtgccaatgg ctggctgccg cgcatcgcgc tgctgatctt gctgcaggcc tgcctcggca
     2581 tcaccacgct attgctcgac gtgccgctgc ccttcgcgct cggccatcag gccctggcct
     2641 tcatgctcgc cggtgccac
//
LOCUS       DATAZA010000002         2750 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3945810, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000002 DATAZA010000000
VERSION     DATAZA010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3945810"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..1528)
                     /gene="murC"
                     /locus_tag="VHZ56_00025"
     CDS             complement(104..1528)
                     /gene="murC"
                     /locus_tag="VHZ56_00025"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003602503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEX4296384.1"
                     /translation="MKMPRNIGPVHFVGIGGIGMSGIAEILHNQGYKVHGSDSAESAN
                     VQRLRAMGIDVRVGQSADNLGDAAVVVISSAIKKSNPELMAARSRGLPVVRRAEMLAE
                     IMRFKNAVAIAGTHGKTTTTTLVATLLDAANYDPTVINGGIINAYGTNARLGDGEWMV
                     VEADESDGTFVKLPADVAIVTNIDPEHLDHYHDFEHVKQAFLTFIENVPFYGFAVMCT
                     DHPVVQEMVGLVRDRRVITYGRNPQADVRLTDLEIVDGQSHFAVEIRDRIRMTHLRIE
                     GLTLPMPGEHNALNATAAIAVADQLKVPAEAIRKGLAAFSGVKRRFTKTGVVGGVTVI
                     DDYGHHPVEITAVLKAARQSTRRDVIAVVQPHRYSRLHDLFNDFATAFNDADTVIVAP
                     VYAAGEAPIEGVTHEELVTRIKARGHRDARVVDRPEALAPLLASRVEAGDYVVMLGAG
                     NITQWAAALPAELGKLMGKEPELP"
     gene            complement(1525..2625)
                     /gene="murG"
                     /locus_tag="VHZ56_00030"
     CDS             complement(1525..2625)
                     /gene="murG"
                     /locus_tag="VHZ56_00030"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEX4296385.1"
                     /translation="MSRFVLMAGGTGGHLFPAMALAQELRRRGHDIDLMTDHRVSSYG
                     DSFPARAIHVVPSATPSVRNPLVFVGASFTILWGTLVAWGKLRRIRPDAVIGFGGYPV
                     FPPFLGARLGGIPGVLHEQNAIMGRANRALARYATRIALSFQRTQHADAFAAKSALTG
                     NPVRDRVRAVAATPYPELTVDGPLRLVVFGGSQGARVFADLVPPAIALLPEAIRHRLR
                     IVQQCRPEDLDRVAEAYRQAHVNVELQPFFADLPERIAGAHLVIARSGASTVAELTVL
                     GRPAIMVPLPGSIDGDQKSNALVLDAAGGGWIAEQATLSPPSLANRLSSLFGDPATLV
                     AAAVAARSLGQPRAVEQLADLVEGLAGRGNTQ"
BASE COUNT          424 a          956 c          935 g          435 t
ORIGIN      
        1 gtcgtcatct ccgccagcaa ctggttgggg atgagctgcc ccctcacctc gccagcccag
       61 ggctgcaggc gctccagcag gtccggccag ggctcggctc cactcacggc agctcgggct
      121 ccttgcccat cagcttgccc agctccgccg gcagcgccgc ggcccattgc gtgatgttgc
      181 cggcgccgag catcaccaca tagtcgcccg cctcgacccg gctcgccagc agcggcgcca
      241 gcgcctcggg ccgatcgacg acgcgcgcgt cgcgatgccc gcgggccttg atgcgggtca
      301 ccagctcttc gtgcgtcacg ccctcgatcg gcgcctcgcc ggctgcatag accggcgcga
      361 cgatgacggt gtcggcatcg ttgaaggcgg tggcgaaatc gttgaacaga tcgtgcagtc
      421 gcgaatagcg gtgcggctgc accaccgcga tcacgtcgcg ccgcgtcgac tgccgcgccg
      481 ccttgaggac ggcggtgatc tccaccgggt ggtggccgta atcgtcgatc accgtcaccc
      541 cgccgaccac gccggtcttg gtgaaacgcc gcttcacacc ggagaaggca gcgagcccct
      601 tgcggatcgc ctcggccggc accttcagct ggtcggcgac ggcaatcgcc gccgtggcat
      661 tgagggcgtt gtgctcgccc ggcatcggca gcgtcagccc ctcgatccgc agatgcgtca
      721 tgcggatgcg gtcgcggatc tcgacggcaa aatggctctg gccgtcgacg atctcgagat
      781 cggtcagccg cacgtcggcc tgcgggttgc ggccataggt gatgacccgc cggtcgcgca
      841 ccagcccgac catctcctgc acgaccgggt ggtcggtgca catcaccgca aagccgtaga
      901 acggcacgtt ctcgatgaag gtgaggaacg cctgcttgac gtgctcgaag tcgtggtagt
      961 gatcgagatg ttcgggatcg atgttggtga cgatggcgac atcggccggc agcttgacga
     1021 aagtgccgtc gctttcgtcg gcctcgacca ccatccattc gccgtcgccg agccgcgcgt
     1081 tggtgccgta ggcgttgatg atgccgccat tgatcacggt cggatcgtag ttggccgcat
     1141 cgagcagggt cgccaccagc gttgtcgtcg tcgtcttgcc gtgcgtgccg gcgatcgcaa
     1201 cggcgttctt gaaccgcatg atctcggcca gcatctcggc ccgccgcacc accggcaggc
     1261 cgcgcgagcg cgccgccatc agctccggat tgcttttctt gatcgctgag gaaatcacca
     1321 ccacagccgc atcgccgaga ttgtcggcgg actgcccgac ccggacgtcg atgcccatcg
     1381 cccgcagccg ctgcacgtta gcgctctcgg cactgtccga gccgtgcacc ttgtagccct
     1441 ggttgtgcag gatttcggcg atgccgctca tgccgatgcc gccgatcccg acgaaatgca
     1501 ccgggccgat gttgcgcggc atcttcattg cgtgttcccc ctgcccgcca ggccttcgac
     1561 gaggtcggcg agctgttcga ctgcccgcgg ctgccccagc gatcttgccg caaccgcggc
     1621 ggcaacgagc gtcgccggat caccgaaaag tgagctcaag cgattggcga gggaaggtgg
     1681 cgaaagcgtg gcctgctcgg cgatccagcc gccgccggcg gcgtcgagca ccagcgcgtt
     1741 gctcttctgg tcgccatcga tcgagcccgg cagcggcacc atgatcgccg gccggcccag
     1801 caccgtcagc tcggcgacgg tcgacgcgcc ggacctcgcg atgaccagat gggcgccggc
     1861 gatgcgctcc ggcaggtcgg cgaagaatgg ctgcagctcg acgttcacat gcgcctgcct
     1921 ataggcctcg gccacccggt cgaggtcctc cggccggcac tgctggacga tccgcaggcg
     1981 gtggcggatc gcttccggca gcagcgcgat cgccggcggc acgagatcgg caaacacccg
     2041 cgccccctgg ctgccgccga acaccacgag gcgcagcggt ccatcgacgg tgagctcggg
     2101 gtatggtgtc gccgcgacgg cgcggacacg atcgcgcacc ggattgccgg tcagcgcgga
     2161 tttggccgca aatgcgtcgg cgtgctgcgt tcgctggaag ctgagcgcga tccgcgtggc
     2221 gtagcgcgcc agggcgcgat tggcccggcc catgatggcg ttctgctcgt gcagcacgcc
     2281 ggggatgccg ccgaggcgcg ccccgaggaa gggcgggaac accggatagc cgccgaagcc
     2341 gatcaccgcg tcggggcgga tgcggcgcaa cttgccccag gcgaccagcg tgccccagag
     2401 gatggtgaaa gacgcgccga cgaacaccag cggattgcgc accgacggcg tcgccgaggg
     2461 cacgacgtgg atggcgcggg cgggaaagct gtcgccatag ctgctgaccc ggtgatcggt
     2521 catcaggtcg atgtcgtggc cgcgccgccg cagctcctgc gccagcgcca tggccggaaa
     2581 gaggtgtcct cccgtccctc cagccatcag cacgaagcgg ctcattcggc gggcgccacc
     2641 atggccggac tgcggtatgg cggcaggccg gtgaccatgc gctcttccgg ccgcttgcgg
     2701 gtcagcgcca gcatcaggcc catgccgaag gcgatggcaa aggtcgaggt
//
LOCUS       DATAZA010000003         1887 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3829787, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000003 DATAZA010000000
VERSION     DATAZA010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1887
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3829787"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1056
                     /gene="glgA"
                     /locus_tag="VHZ56_00035"
     CDS             <1..1056
                     /gene="glgA"
                     /locus_tag="VHZ56_00035"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: protein motif:HMM:TIGR02149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004373 - glycogen (starch) synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase"
                     /protein_id="HEX4296386.1"
                     /translation="RGQEPWDQITHGTTGKFKGALEALSLNLTQVKALEAIDICHTHT
                     WYVSMAGFLAKKLYGTPFVLTTHSLEPLRAWKSEQLGSGYAMSSWMERTAILEADAVI
                     AVSNGTKADVLRAYDVPADRVHVIYNGIDLNEYQQTPDTTALRQYGVDPAIPYVLFVG
                     RITRQKGVTHLVDAIRYLPTETQIVLCAGAPDTPEIAAEMRAKVDEARHHNPHIVWIE
                     KMVTRAETIQLYSHARVFCCPSVYEPFGIINLEAMACRAPVVASATGGILEVVVDGET
                     GYLVPFEQDPVTSFPVDPDQFARDLSARLTVLLKDPAACKRMGDAGRKRVEQHFAWSS
                     IADQTIALYQALIEHKK"
     gene            1181..>1887
                     /locus_tag="VHZ56_00040"
     CDS             1181..>1887
                     /locus_tag="VHZ56_00040"
                     /inference="COORDINATES: protein motif:HMM:NF019500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HEX4296387.1"
                     /translation="MHPLGLIFGLLAIGTVLLDAFETIILPRRASGKIRLTRLFYVLT
                     WRPWAAVVSRYSNRRLRETGFSFYGPLSLLLLMALWAVGLVFGFGLMFYGLGAPLHDP
                     LGLHPLHAAIYISGTTLFTLGIGDIIPLNHWARDLVIIEAGTGLGFVAVVIGYLPVLY
                     QAFSRREGSIALLDGRAGSPPTASELLRRHASDGGNDALVDLLAEWERWSAEMLESHI
                     SYPLLCYFRSQHDNQSWL"
BASE COUNT          331 a          696 c          522 g          338 t
ORIGIN      
        1 cgcggccagg agccctggga ccagatcacc cacggcacca ccggcaagtt caagggcgcc
       61 ctcgaagccc tcagcctcaa cctgactcag gtcaaggcgc tcgaagcgat cgacatctgc
      121 cacacccata cctggtacgt ctcgatggcc ggcttcctcg ccaagaaact ctacggcacc
      181 ccattcgtcc tcaccacgca ctcgctcgag ccgctccgcg cctggaagtc cgagcagctt
      241 ggctccggct acgcgatgag ctcctggatg gagcgcaccg ccatcctcga agccgacgcc
      301 gtcatcgccg tctcgaacgg caccaaggcc gacgtcctcc gcgcctacga cgtgcccgca
      361 gaccgcgtcc atgtcatcta caacggcatc gacctgaacg agtaccagca gacccccgac
      421 accaccgcac tgcgccagta cggcgtcgat ccggcgattc catacgtcct cttcgtcggc
      481 cgcatcaccc gccagaaggg cgtcacccat ctggtcgacg ccatccgcta cctgccgacg
      541 gagacgcaga tcgtcctctg tgccggcgcc cccgacacgc ccgagatcgc cgccgagatg
      601 cgcgccaagg tcgacgaggc ccggcaccac aacccccaca tcgtctggat cgagaagatg
      661 gtcacgcgtg ccgagaccat ccagctctac tcccatgccc gggtcttctg ctgcccctcc
      721 gtctacgaac ccttcggcat catcaacctc gaagccatgg cctgccgtgc cccagtggtc
      781 gccagcgcta ccgggggcat cctcgaagtc gtggtcgatg gcgaaaccgg ctaccttgtc
      841 ccgttcgagc aggaccccgt caccagcttc cccgtcgacc ctgatcagtt cgcccgcgat
      901 ctcagcgcga gactgaccgt gctgctcaaa gatcccgccg cctgcaagcg aatgggcgat
      961 gccggccgta aacgcgtgga gcagcatttc gcctggtcca gcatcgccga ccagacgatc
     1021 gccctctatc aggcactgat cgagcacaag aagtagcatt cagcctgtat ctgaaactcc
     1081 agccgtcgcg caacatcacc agcaaccagc gcggcaccat cttcgaagct taaccagcaa
     1141 tgactggcgc gggcgatcgg gcaggccgca caatacaacc gtgcacccac tcggcctcat
     1201 cttcggactg ctcgccatcg gcactgtgtt gctcgatgcc ttcgagacca tcattctgcc
     1261 gcgtcgcgcc agtggaaaga tccggctcac ccggctcttt tatgtgctta cctggcgtcc
     1321 ctgggcggcg gtggtaagcc gctacagcaa ccgtcgcctg cgcgagaccg gtttcagctt
     1381 ctatggcccg ctctcgctgc tcctcctcat ggccctgtgg gcggtgggcc tggtcttcgg
     1441 cttcggcctc atgttctacg gactcggcgc gccgttgcac gatccgctcg ggctgcaccc
     1501 gctccatgcc gcgatctata tcagcggcac cacgctgttc acgctcggca tcggcgacat
     1561 cattccgctg aatcactggg cgcgcgattt ggtcatcatc gaggccggca ccggacttgg
     1621 cttcgtcgcc gtggtcatcg gctaccttcc agtgctctat caggcctttt cgcggcgcga
     1681 aggctcgatc gcgctgctcg atggccgcgc cggctcgccg cccaccgcga gcgagttgct
     1741 gcgccgccac gccagcgatg gcggcaacga tgcgctggtg gatctgctgg cggagtggga
     1801 gcgctggtcc gcggagatgc tggagagcca catttcgtat ccattgctgt gctatttccg
     1861 ctcacagcat gacaaccaga gctggct
//
LOCUS       DATAZA010000004         2259 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3945863, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000004 DATAZA010000000
VERSION     DATAZA010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2259
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3945863"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..146)
                     /locus_tag="VHZ56_00045"
     CDS             complement(<1..146)
                     /locus_tag="VHZ56_00045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020812261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEX4296388.1"
                     /translation="MQDQGLDALVLAQPESILYAAGAFPGVATNWRRAGAAFLLVPAD
                     PGAPL"
     gene            complement(196..1785)
                     /locus_tag="VHZ56_00050"
     CDS             complement(196..1785)
                     /locus_tag="VHZ56_00050"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4296389.1"
                     /translation="MWKAFKYALAVAALGAMTPVVAMAATPADTLVIAKQIDDIISLD
                     PAQAYELSGIEVDANVYDRIMRFEPTDVTKLVPGVADSVSVSDDGKTFTFKIRQGMKF
                     SSGNPVTAADAAWSLQRVIKLQKTPVFLLSQLGWTADNVEKMVTAPDDSTLKVTIGVN
                     YAPTLVYALLGSIVGSVVDEKTAMAHDSNGDLGNAWLTNNSAGSGAYVLKAWTPNQTV
                     VLQANPNYRGGVAKLKTVVIQHIPDASAQRLALEKGDVDIAENLTPDQVAAISGNKDI
                     KVTTIPQALLYYIGLNQKDKDLQDPKVRQALRYLVDYDGMANSFLKGADQVHQSFWAS
                     GFWASYDENPYKLDVAKAKDLLTQAGYPNGFSLDLDAPNFSPFVNMAQSVQSTFAQAG
                     IKVNIISSEMAPMLTKYRARQHQALMVYWGPDYMDPHTNADGFITNNDNSDGATGHPL
                     AWRNTWQDTDLNAAVAAAASERDEGKRMQDYIDLQKKLLDVGPYIIMFQQISQRADRA
                     TVQGFVQGPSSDVTYYNLTTK"
     gene            complement(1894..>2259)
                     /locus_tag="VHZ56_00055"
     CDS             complement(1894..>2259)
                     /locus_tag="VHZ56_00055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012708956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4296390.1"
                     /translation="HRFRYPHQLSGGQRQRIAIARALILNPPVLLLDEPTSSLDVSAQ
                     AEILNLIGRLRQSYSLTSILVSHDLAVVAHLCNRIAIMQLGRLVEIIAAADLRTGRVA
                     ADYTRSLIAASRGFTRAPA"
BASE COUNT          353 a          660 c          823 g          423 t
ORIGIN      
        1 agcggcgccc cggggtcggc gggaacgagg aggaaagcgg caccggcacg ccgccagttg
       61 gtcgcgacac cgggaaaggc gccggcggca tagaggatcg attccggctg ggcgaggacc
      121 agggcatcga ggccctggtc ctgcatcaga cgagcggcgc ggtgccggtc gataaatccc
      181 ggcaccgcgt cgaccttact tcgtggtcag gttgtagtag gtcacgtccg aggacgggcc
      241 ctggacaaaa ccctgcaccg tggcccgatc ggcacgctgc gagatctgct ggaacatgat
      301 gatgtacggg ccgacgtcga ggagcttctt ctgcaggtcg atgtagtcct gcatgcgctt
      361 gccctcgtcg cgctcgctgg ccgccgcggc gaccgcggcg ttcaagtcgg tatcctgcca
      421 ggtattgcgc caggccagcg gatggccggt ggccccgtcg gagttgtcgt tgttggtaat
      481 gaagccgtcg gcgttggtgt gcgggtccat gtagtccggt ccccagtaga ccatcagcgc
      541 ctggtgctgg cgggcacggt acttggtgag catcggcgcc atttcggacg agatgatgtt
      601 caccttgatg ccggcctgcg cgaaggtcga ctgcaccgac tgcgccatgt tcacgaacgg
      661 cgagaagttc ggcgcgtcga gatcgagcga gaagccgttc ggatagccgg cctgggtcaa
      721 gaggtccttg gccttggcga cgtcgagctt gtacggattc tcgtcgtacg aggcccagaa
      781 gcccgaggcc cagaacgact ggtgcacctg gtcggcgccc ttgaggaagg agttggccat
      841 cccgtcatag tcgacgaggt agcgcagcgc ctgccggact ttcgggtcct gcaggtcctt
      901 atccttctgg ttgaggccga tgtagtacag cagggcctgc gggatcgtcg tgaccttgat
      961 gtccttgttg ccgctgatgg cggcgacctg gtcgggcgtc aggttctcgg cgatgtcgac
     1021 atcacccttc tcgagggcaa ggcgctgggc cgacgcatcc gggatgtgct ggatgacgac
     1081 ggtcttcagc ttggcgacgc caccccgata gttcgggttg gcctgcagca cgacggtctg
     1141 gttcggagtc cacgccttga ggacgtaggc gcccgagccg gccgaattgt tggtcagcca
     1201 ggcattgccc aggtcgccat tgctgtcgtg cgccatcgcg gtcttctcgt cgacgacgga
     1261 gccgacgatc gagccgagca gagcatagac gagggtcggc gcgtagttga cgccgatggt
     1321 gaccttgagc gtcgagtcgt cgggcgcggt gaccatcttt tcgacgttgt cggcggtcca
     1381 gccgagctgg ctcaggagga acaccggcgt cttctgcaac ttgatgacgc gctgcagcga
     1441 ccaggcggcg tccgcggcgg tgaccgggtt gccggacgag aacttcatgc cctggcggat
     1501 cttgaaggtg aaggtcttgc cgtcgtcgct gacggagacg ctgtcggcaa cgcccggcac
     1561 cagcttggtg acgtcggtcg gttcgaaccg catgatgcgg tcgtagacgt tggcgtcgac
     1621 ctcgatgccc gacagctcgt aagcctgggc ggggtcgagc gagatgatgt cgtcgatctg
     1681 tttggcgatc accagcgtat cggccggcgt cgcggccatc gccactaccg gcgtcatggc
     1741 gccgagcgcg gccaccgcca gggcgtattt aaaggctttc cacatgcagt tctcccttgc
     1801 aacctggcgc tttgttttgc ccggaggggg gccgtcgcgg caggccgttc atctgagacc
     1861 ttttggtccg caatggcaag ggatgcgggg atttcaggcc ggagcgcggg tgaagccgcg
     1921 gctcgcggcg atcaggctgc gggtgtagtc ggccgccacc cggccggtgc gcaggtcggc
     1981 ggcggcaatg atctcgacca gccgcccgag ctgcatgatg gcgatgcggt tgcagaggtg
     2041 ggcgacgacg gcgaggtcat ggctcacgag gatgctggtc aggctgtagc tctgccgcag
     2101 cctgccgatg aggttgagga tttccgcctg cgccgagacg tcgaggctgg aggtgggttc
     2161 gtcgagcagc agcaccggcg ggttgaggat cagcgcccgg gcgatggcga tgcgctggcg
     2221 ctggccgccg gacagctggt gcggatagcg gaaccggtg
//
LOCUS       DATAZA010000005         6264 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3713867, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000005 DATAZA010000000
VERSION     DATAZA010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6264
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3713867"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(113..592)
                     /locus_tag="VHZ56_00060"
     CDS             complement(113..592)
                     /locus_tag="VHZ56_00060"
                     /inference="COORDINATES: protein motif:HMM:NF039465.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6468 domain-containing protein"
                     /protein_id="HEX4296391.1"
                     /translation="MMFGMSLGMIVESAVAILLAVTIGYCVILNSRLKRLHGDREMLQ
                     KMVGDLVQATALANAAVKELKTAAVEADSGLDKKIDEAVRVSNELTSQVSSGSQLVEK
                     IARITAAAKMQALPEAAPEPAKPAKPAKAPPPVEPQGRLHSALQALAMRPGIGGRAA"
     gene            complement(589..1731)
                     /gene="fliM"
                     /locus_tag="VHZ56_00065"
     CDS             complement(589..1731)
                     /gene="fliM"
                     /locus_tag="VHZ56_00065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HEX4296392.1"
                     /translation="MAEPGEQDKLAENWNPAGSGTDETISPDWATMLEADPAKAGAEG
                     GPDRVLNQDEIDSLLGFDANTSSAVELTGVQALINSALVSYERLPMLEIVFDRLVRLA
                     TTSLRNFTSDNVEVSMESISSVRFGDYLNSIPLPAILSVIKAEEWDNFGLLTVDSNLI
                     YSMIDVLLGGRRIGGQIRVEGRPYTTIEMALARRMIEVILEDTHKAFAPVTEVSFRLE
                     RLETNPRFAAISRPANAAILIELRIEMDDRGGKIEILLPYATIEPIREQLLQMYMGEK
                     FGRDPIWEGHLATEIYAADVQLEAVLHEFDLPLSRALNLKPGETIMFERSPQEPITLR
                     CGDVELTQGVMGHIGNHVSVRVSRRPNPPRVTMAAFEALDNAAEGR"
     gene            complement(1731..2246)
                     /locus_tag="VHZ56_00070"
     CDS             complement(1731..2246)
                     /locus_tag="VHZ56_00070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated FliL family
                     protein"
                     /protein_id="HEX4296393.1"
                     /translation="MAVEAEAETEEGEAQPAKKGIPRRLLIIGAAGLIVLLAAGAGLY
                     FFVFAGHGASADAAKQAAAAAAAVPDTFIFNLPTMTVNLNDDGAPGDQFLKLTVALEV
                     ANQGVMTAIQPRMAKVIDAFQVYLRELRKSDLEGSAGIYRLKEELRRRVNVAIFPAQI
                     DGILFKEILVQ"
     gene            2527..3264
                     /gene="flgF"
                     /locus_tag="VHZ56_00075"
     CDS             2527..3264
                     /gene="flgF"
                     /locus_tag="VHZ56_00075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgF"
                     /protein_id="HEX4296394.1"
                     /translation="MENAQLISLSRQIALQRQMDVVANNLANINTTGFKSENMLFEDY
                     MMPVAKDNDFAGSDANLHFTEDWSTLPDMSSGSIEQTGDPLDVAVQGPGLLSVQTSGG
                     ERYTRDGALAIDSTGTLVDLNGNPVLTDSGPVHFDPTDTDITISSNGAISTAAGAKGT
                     LKLTEFADPQTLTRIGNNYFSGTGGATATATSLVQGSVEHSNVSGVTEMTQMIRVQRA
                     YETLANLMQQQDQLRNTAVQRLGDMNA"
     gene            3278..4063
                     /gene="flgG"
                     /locus_tag="VHZ56_00080"
     CDS             3278..4063
                     /gene="flgG"
                     /locus_tag="VHZ56_00080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009426 - bacterial-type flagellum basal
                     body, distal rod [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HEX4296395.1"
                     /translation="MKALYIASTGMAAQEQNVEIISNNIANMRTTGYKKQRAEFQDLL
                     YQVFQRAGSATSDQGTQVPSGIEIGSGVMTSATPRVMTQGTVTPTEKDLDLAVQGTGY
                     FAVQLPDGRTGYTRDGSFERNSSGLLVNSDGYQVEPGITIPDNANNLSISADGIVQAY
                     VGTDTAPTQLGQLQLYRFVNEQGLESIGNNNYVATAASGEAQAGTPNTDGMGNVMQGY
                     LEEANVNPVTEVADLIAAQRAYEMNARVITGADEMLQTVSQMH"
     gene            4074..5012
                     /gene="flgA"
                     /locus_tag="VHZ56_00085"
     CDS             4074..5012
                     /gene="flgA"
                     /locus_tag="VHZ56_00085"
                     /inference="COORDINATES: protein motif:HMM:TIGR03170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation chaperone
                     FlgA"
                     /protein_id="HEX4296396.1"
                     /translation="MTRLTIALLSSLLLTGAAFAAPTLRGDVTVDTPVVTVGDMFDDP
                     GDMAATAIFRAPAPGTTGIVPLADVQHAAEAIGLSAFDAAGYTRVVVVRTSTVVDASV
                     LDRLIDAELASRGVLTASITADIRYDVPNPSFDAEKSDSPATLATLRYNAGSDSFAAR
                     FTIAGIDQPVDLTGTIDLMTTAPRLVATHPAGDVLAAADLEMAAVPLAQATAGGYADL
                     DQLVGKQLVRQSRAGLMLKPDDVTSPTVVTRNTLVTVVLKAGAMTLTVKGQSLTTAAA
                     GEPVDVLNTATKKVLHGVAEPDGTVQIVTAVTAAGL"
     gene            5014..5763
                     /gene="flgH"
                     /locus_tag="VHZ56_00090"
     CDS             5014..5763
                     /gene="flgH"
                     /locus_tag="VHZ56_00090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009427 - bacterial-type flagellum basal
                     body, distal rod, L ring [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HEX4296397.1"
                     /translation="MNSMTTLKLLSTLSLVSLLGGCATLDQLSQVGEAPKLTAIADPT
                     ADPGYAPVNMPMPEVVPASYQPNSLFSTDARGFFKDQRARKVGDILTVVVTIDDSASI
                     SNATTRKQTSANSANVGSTLGSLFGTKLPGADVSATGDISTGGTMSDGGAGTVDRNEK
                     LTTNVAAVVTQTLPNGNLVIEGRQEVRVNFEIRELIVEGIVRPEDIQSDNTIPSEKIA
                     EARISYGGRGQITDVQQPRYGQQIADAILPF"
     gene            5996..>6264
                     /locus_tag="VHZ56_00095"
     CDS             5996..>6264
                     /locus_tag="VHZ56_00095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015315242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase M32"
                     /protein_id="HEX4296398.1"
                     /translation="MPATNSAFVRLAELGRKLEALEHAQSMLSVDEAVMMPGGGGEKR
                     AESMAMLAGMYHEMATAPEIADWLDAAAGEPLDDMQQAALREQRRV"
BASE COUNT         1077 a         2348 c         1848 g          991 t
ORIGIN      
        1 gccgcgaccg gcccggtcag cacatagccg ccattggtgg cgatcccgat gcccttgaac
       61 accaggagcg ccagcgccgc gaagatgacg accgggagga ggcggatcga tctcaagcgg
      121 ccctgcctcc gatgcccggc cgcatcgcca gcgcctgcag ggccgagtgc agccggccct
      181 gtggttcgac cggcggcggc gcctttgccg gcttcgccgg cttggcgggt tccggcgccg
      241 cctcgggcag cgcctgcatc tttgccgccg cggtgatccg cgcgatcttt tcgaccagct
      301 gcgagcccga cgacacctgc gaggtcagct cattgctcac ccgcaccgct tcgtcgatct
      361 tcttgtcgag cccgctgtcg gcctcgaccg ccgcggtctt cagttccttg actgcggcat
      421 tggccagcgc cgtcgcctgc accaggtcgc cgaccatctt ctgcagcatc tcgcgatcgc
      481 cgtgcagccg cttcagccgc gaattgagga tcacgcaata gccgatggtc acggccagca
      541 agatcgccac ggcactctcg acgatcatcc ccaggctcat gccgaacatc atcgcccctc
      601 cgctgcgtta tccaatgctt cgaatgccgc catcgtcacc ctcggcgggt tgggccgccg
      661 cgacacccgc accgacacgt ggttgccgat gtggcccatc accccctgcg tcagctcgac
      721 gtcgccgcag cgcagcgtga tcggctcctg cggcgagcgc tcgaacatga tcgtttcccc
      781 cggcttcagg ttgagcgccc ggctgagcgg caggtcgaac tcgtgcagca ccgcctcgag
      841 ctgcacgtcc gccgcgtaga tctcggtcgc gagatggcct tcccagatcg ggtcgcggcc
      901 gaacttctcg cccatgtaca tctgcagcag ctgctcgcgg atcggctcga tcgtcgcgta
      961 gggcagcagg atctcgatct tgccgccgcg atcgtccatc tcgatccgga gctcgatcag
     1021 gatcgccgca ttggccggcc gcgagatcgc cgcgaagcgc gggttggtct ccagccgctc
     1081 gagccggaag ctgacctcgg tcaccggcgc gaaagccttg tgcgtatcct cgaggatcac
     1141 ctcgatcatc cgccgcgcca gcgccatctc gatggtggtg tagggccgcc cctcgacccg
     1201 gatctgcccg ccgatgcggc gccccccgag cagcacgtcg atcatcgagt agatgagatt
     1261 gctgtcgacc gtcagcaggc cgaaattatc ccattcctcg gccttgatga cgctgaggat
     1321 cgccggcagt ggaatcgagt tcagatagtc gccgaagcgc accgaggaga tcgactccat
     1381 cgacacttcg acattgtccg aagtgaaatt gcgcagcgac gtcgtcgcca gccggaccag
     1441 ccggtcgaac acgatctcca gcatcggcag ccgctcgtag ctgaccagcg ccgaattgat
     1501 cagcgcctgc acgccggtca gctcgaccgc gctcgaggta tttgcatcga acccgagcag
     1561 gctgtcgatc tcgtcctggt tgagcacgcg gtccgggccg ccttcggccc ccgcctttgc
     1621 aggatcggcc tcgagcatcg tcgcccagtc gggcgaaatc gtctcgtccg ttccgctccc
     1681 tgccggattc cagttctcgg caagcttgtc ctgttccccc ggttcggcca tcactgcacc
     1741 aggatttcct tgaacaggat gccgtcgatc tgcgccggga agatcgccac gttgacgcgg
     1801 cggcgcagct cctctttcag ccggtagatc cccgccgacc cttcgaggtc gctcttgcgc
     1861 agctcgcgca ggtacacctg gaaggcatcg atcaccttgg ccatgcgcgg ctggatcgcc
     1921 gtcatcacgc cctggtttgc cacctccagc gccacagtga gcttgaggaa ctggtcgccg
     1981 ggcgcgccgt cgtcattgag gttcaccgtc atcgtcggca gattgaagat gaaggtgtcg
     2041 ggcaccgcgg ccgccgctgc ggccgcctgc ttggcggcgt cggcgctcgc gccgtgcccg
     2101 gcaaagacga agaagtagag cccggctcca gccgccagca gcacgatcag cccggcggcc
     2161 ccgatgatca gcagccggcg tggaatcccc ttcttcgcgg gttgggcctc gccctcttcc
     2221 gtctcggctt cggcttccac ggccatgcgc gaagaacccc tgaaatccgg acgattccgg
     2281 cacgggtcca gctaatcgtc ggatggttaa cgatccctta ccggcgagcc tcgatcggca
     2341 gaaattgccg ggtcgttctt gccggaaggg cgcggcaacc tatgcccatc cgatcctggc
     2401 aaatcttcga caacactgaa atcgttgatg attttgctct ggcacggttt ctgcaatgtt
     2461 aacggcggag cggcacgctt ggggaagtgg cgctggtccg gggactagat acggggaacc
     2521 tgcgccatgg aaaatgcgca actcatttcg ctctcgcgac agatcgcgct gcagcgccag
     2581 atggatgtcg tggcgaacaa tctcgccaac atcaacacca ccggcttcaa gtccgagaac
     2641 atgctgttcg aggactacat gatgccggtc gccaaggaca acgacttcgc tggcagcgac
     2701 gccaacctcc acttcaccga ggattggtcg accctgcccg acatgtcgag cggttcgatc
     2761 gagcagaccg gcgatccact cgatgtggcg gtccagggtc caggcctgct cagcgtccag
     2821 accagcggcg gcgagcgcta cacccgcgac ggcgccctcg cgatcgacag caccggcacg
     2881 ctggtcgacc tcaacggcaa ccccgtgctc accgactcgg gtccggtgca cttcgatccc
     2941 accgacaccg acatcaccat ctcgagcaac ggcgcgatct ccaccgccgc cggtgccaag
     3001 gggacgctca agctcaccga gttcgccgac ccccagaccc tcacccgcat cggcaacaac
     3061 tacttctccg gcaccggcgg cgccaccgcc accgccacca gcctcgtgca gggctcggtc
     3121 gagcactcga acgtctccgg cgtcaccgag atgacgcaga tgatccgcgt gcagcgcgcc
     3181 tacgagacgc tcgccaatct gatgcagcag caggaccagc tccgcaacac cgcggtgcag
     3241 cgtcttggcg acatgaacgc ctgaacggga ggcccggatg aaagcccttt acatcgcctc
     3301 caccggcatg gccgctcagg agcagaacgt cgagatcatc tcgaacaaca tcgcgaacat
     3361 gcgcacgacc ggctacaaga agcagcgtgc ggaattccag gacctgctct accaggtctt
     3421 ccagcgcgcc ggctccgcca cctccgacca gggcacgcag gtgccgagcg gcatcgagat
     3481 cggctccggc gtcatgacct cggccacgcc tcgcgtgatg acccagggca cggtgacgcc
     3541 gaccgaaaag gatctcgatc tcgccgtgca gggcaccggc tacttcgccg tgcagctgcc
     3601 cgacggtcgc accggctaca cccgcgacgg ctcgttcgaa cgcaattctt ccggcctcct
     3661 ggtcaacagc gacggctacc aggtcgagcc ggggatcacc atccccgaca acgccaacaa
     3721 cctgtcgatc agcgccgacg gcatcgtcca ggcctatgtc ggcaccgaca ccgcgcccac
     3781 ccagctcggc cagctccagc tctatcgctt cgtcaacgag cagggcctcg aatcgatcgg
     3841 caacaacaac tacgtcgcca ccgctgcgag tggtgaagcc caggccggca ctcccaacac
     3901 cgacggcatg ggcaacgtca tgcagggcta cctcgaggag gccaacgtca acccggtgac
     3961 cgaggtcgcc gacctgatcg ctgcgcagcg cgcctacgaa atgaatgccc gcgtcatcac
     4021 tggagccgac gagatgctcc agaccgtcag ccagatgcat tgaggaccgg accatgacca
     4081 gactgaccat cgcgctcctc tcctcgctgc tgctgaccgg cgccgccttt gccgccccca
     4141 ccctgcgcgg cgacgtcacc gtcgacaccc cggtggtcac cgtcggcgac atgttcgacg
     4201 atcccggcga catggccgcg accgcgatct tccgtgcgcc ggcgcccggc accaccggca
     4261 tcgtgccgct ggcggacgtc cagcatgcgg ccgaggcgat cggcctcagc gccttcgacg
     4321 cggccggcta cacccgcgtc gtcgtcgtcc gcacctcgac cgtggtcgac gccagcgtgc
     4381 tcgacaggct gatcgacgcc gagctggcca gccgtggcgt cctcaccgcc agtatcaccg
     4441 ccgacatccg ctacgacgtg ccgaacccca gcttcgatgc cgagaagtcg gacagtcccg
     4501 cgaccctcgc cacgctccgc tacaacgccg gcagcgacag cttcgcggct cgcttcacca
     4561 tcgccggcat cgaccagccg gtcgatctca ccggcaccat cgacctgatg accaccgcgc
     4621 cccggctggt cgccacgcac ccggccggcg atgtcctcgc cgccgccgac ctcgagatgg
     4681 ctgctgtccc cctggcccag gccaccgccg gcggctacgc cgacctcgac cagctggtcg
     4741 gcaagcagct ggtgcggcag agccgggccg gcctcatgct caagcccgac gacgtcacca
     4801 gtcccactgt cgtcacccgc aacaccctgg tgaccgtcgt cctcaaggcc ggtgccatga
     4861 ccctcaccgt caagggccag tcgctcacca ccgccgctgc cggcgagccg gtcgacgtgc
     4921 tcaacaccgc taccaagaaa gtcctccacg gcgtcgccga gcccgacggc accgtgcaga
     4981 tcgtcaccgc tgtcaccgcc gctggcctct aggatgaact ccatgaccac gctgaaactg
     5041 ctttccaccc tgagcctcgt cagcctgctc ggcggctgcg ccacgctcga ccagctttcc
     5101 caggtcggcg aggcgcccaa gctcaccgcc atcgccgatc ccaccgccga ccccggctac
     5161 gcgccggtca acatgccgat gcccgaggtg gtgccggcga gctaccagcc caactcgctg
     5221 ttctcgaccg acgcccgcgg cttcttcaag gaccagcgcg cccgcaaggt cggcgacatc
     5281 ctgaccgtgg tcgtcaccat cgacgacagc gcctcgatct ccaacgccac cacccgcaag
     5341 cagacctccg ccaactccgc caacgtcggc agcactctcg gctcgctgtt cggcaccaag
     5401 ctgccgggag ccgacgtcag cgccaccggc gacatctcga ccggcggcac catgagcgac
     5461 ggcggcgccg gcaccgtcga ccgcaacgag aagctcacca ccaatgtcgc cgcggtcgtc
     5521 acccagaccc tgcccaacgg caacctcgtc atcgagggcc gccaggaggt gcgggtcaac
     5581 ttcgagatcc gcgagctgat cgtcgagggc atcgtgcgtc ccgaggacat ccagtccgac
     5641 aacaccatcc cgtccgaaaa gatcgccgag gcgcgcatct cctacggcgg gcgtggccag
     5701 atcaccgacg tgcagcagcc gcgctacggc cagcagatcg ccgacgccat cctgccgttc
     5761 tgaattcggg cggccgcacc ggctgcccca cctctcccgg atcgcgcgat ccccccattg
     5821 gcgcatccgg tcccggcggt tccagaaggg cccgcctttc tgcggggcgc agtctccccg
     5881 gctgcgcccc ctcccctttt cgtcgattgg ccggcgcgcc gcctcgatcg aggttcccgc
     5941 tttcgcggcg atcactccgt ggtaagaggc agcttccacc gcagggaact tgcgcatgcc
     6001 cgccaccaat tccgccttcg tccgcctcgc cgaactcggc cgcaagctcg aggcgctcga
     6061 gcacgcccaa tcgatgctga gcgtcgacga agcggtgatg atgcccggtg gcggcggcga
     6121 gaagcgcgcc gagtcgatgg ccatgctggc cggcatgtat cacgagatgg cgaccgcacc
     6181 cgagatcgcc gactggctcg atgccgccgc cggcgagccg ctcgacgaca tgcagcaggc
     6241 ggcgctccgc gagcagcgtc gcgt
//
LOCUS       DATAZA010000006         2088 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3945947, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000006 DATAZA010000000
VERSION     DATAZA010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3945947"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..281)
                     /locus_tag="VHZ56_00100"
     CDS             complement(<1..281)
                     /locus_tag="VHZ56_00100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CHC2 zinc finger domain-containing protein"
                     /protein_id="HEX4296399.1"
                     /translation="MRFTPQFLEELRARLPVSEVVGRRVKLKKAGREYKGLSPFQQEK
                     TPSFTVNDQKQFYHDFSTGKHGNIFDFVMETEGVSFPEAVERLASMAGLP"
     gene            complement(530..931)
                     /locus_tag="VHZ56_00105"
     CDS             complement(530..931)
                     /locus_tag="VHZ56_00105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016839680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase family protein"
                     /protein_id="HEX4296400.1"
                     /translation="MTCDRLFVYGTLMRDFDHPMARMLSRNADFLGAARCRGRLYLVK
                     HYPGLVLSDDEADAVYGEVYRLHQPEALIAEFDMYEACGEGFPEPTQYVRQMLPVALE
                     QGGETVEVWTYIYNWPVAGLKRIESGRFMEK"
     gene            complement(962..1774)
                     /locus_tag="VHZ56_00110"
     CDS             complement(962..1774)
                     /locus_tag="VHZ56_00110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016839681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEX4296401.1"
                     /translation="MEIKVGFEISHAAAQPTPMVTLLNIHPSRFADIVGTERIIAEPD
                     VPIRFYRDSFGNVCGRLVAPAGGITLRGQALVRDCGLPDVVMPAAQQVAVERLPDDVL
                     LYLMPSRYCETDKLTDIAWSLFGQTRPGWERAQAIVDFVHHHVKFGYEFAHNMKSAHD
                     VYEQRAGVCRDFAHLAVTLCRCMNIPARYCTGYLGDIGVPPEPSPMDFSGWFQVYLSG
                     EWYTFDARHNTPRIGRILMATGRDAADVALTTSFGRMDLVKFVVVTDEVVPA"
     gene            complement(1777..>2088)
                     /locus_tag="VHZ56_00115"
     CDS             complement(1777..>2088)
                     /locus_tag="VHZ56_00115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011504358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEX4296402.1"
                     /translation="GIAARFVSGYLFVPNDDEAPGHVGGGSTHAWVQVYLPSAGWIEF
                     DPTNGIVGSRDLIRVAVARDPRQAIPLHGTYLGTADAFIGMDVCIDVTPASEASEDAR
                     A"
BASE COUNT          370 a          684 c          694 g          340 t
ORIGIN      
        1 ggcagcccgg ccatcgaggc gagccgctcg acggcctcgg ggaacgagac gccctcggtc
       61 tccatcacga agtcgaagat gttgccgtgc ttgccggtcg agaagtcgtg gtagaactgc
      121 ttctggtcgt tgacggtgaa cgagggcgtc ttttcctgct ggaacggcga cagccccttg
      181 tactcgcggc ccgccttctt cagcttgacg cgccggccga cgacttccga aaccggaagc
      241 cgggcgcgca gttcttcgag gaattggggc gtaaagcgca tgggaatcgc ggcgggtcct
      301 gtgcaaccga tcatggatat aggcacgaac ccccgaagta tcagagtccg acgtcttcct
      361 gggtcttctc gccgctattc acaggggcgg aacatcagaa aagccggttg tgccccggat
      421 gcggcgcagc gcgcagcggt gcgcgctgat ccggggccca tccaagcaaa taggtcccgg
      481 ctctgcgaag cggcactgcg cgccgcatcg cgtccgggac gcgagtccct cacttctcca
      541 tgaagcgccc cgactcgatc cgcttcagcc cggcaaccgg ccagttgtag atgtaggtcc
      601 agacctcgac cgtctcgccg ccctgctcca gcgcgactgg cagcatctgc cggacatatt
      661 gcgtcggctc gggaaagccc tcgccgcagg cctcgtacat gtcgaactcg gcgatcagcg
      721 cctcgggctg gtgcagccgg tagacctcgc cataaaccgc atccgcctcg tcatcggaca
      781 gcaccaggcc ggggtaatgc ttgaccagat agagcctgcc gcggcagcgc gcggcgccga
      841 ggaaatcggc gttgcgcgac agcatccgcg ccatcggatg atcgaagtcg cgcatcaggg
      901 tgccgtagac gaagagccgg tcgcaggtca tgccgcactt atcccgtact aaccggcggg
      961 atcaagccgg caccacctcg tcggtcacca ccacgaattt cacgaggtcc atccgcccga
     1021 agctcgtggt cagcgcgacg tcggcggcgt cgcggccggt ggccatcagg atgcggccga
     1081 tccgcggcgt gttgtggcgc gcatcgaagg tgtaccactc gcccgacaga tagacctgga
     1141 accagccgga gaaatccatc ggcgatggct cgggcggcac gccgatgtcg ccgagatagc
     1201 cggtgcagta gcgcgccggg atattcatgc agcggcacag cgtcaccgcc agatgcgcga
     1261 agtcgcggca gacgccggcg cgctgctcgt agacgtcgtg cgccgacttc atgttgtggg
     1321 cgaattcgta gccgaacttg acgtggtgat ggacgaaatc gacgatcgcc tgcgcccgct
     1381 cccagccggg tctggtttgg ccgaacagcg accaggcgat gtctgtcagc ttgtcggtct
     1441 cgcaatagcg gctcggcatc agatagagca gcacgtcgtc cggcagtcgc tcgaccgcga
     1501 cctgctgcgc ggccggcatc acgacgtcgg gcagaccgca atcgcgcacc agcgcctggc
     1561 cgcgcagggt gatgccgccg gcgggcgcca ccagccggcc gcagacattg ccgaaactgt
     1621 cgcggtagaa cctgatcggc acgtccggtt cggcgatgat gcgctcggtg ccgacgatgt
     1681 cggcaaagcg cgacgggtgg atgttgagca gcgtcaccat cggcgtcggc tgcgcagccg
     1741 catggctgat ttcgaagccc accttgattt ccatgatcag gccctcgcgt cctcgctcgc
     1801 ttcgctggcc ggcgtaacgt cgatgcagac gtccatgccg ataaaggcgt cggcggtgcc
     1861 gagataggtg ccgtgcagcg ggatcgcctg gcgcggatcg cgcgccaccg cgacgcggat
     1921 caggtcgcgg ctgccgacga tgccgttggt cggatcgaac tcgatccagc cggcgctggg
     1981 cagatagacc tgcacccagg cgtgggtcga accgccgccg acatgaccgg gagcttcgtc
     2041 gtcgttcgga acgaacagat agccggagac gaagcgcgcg gcgatgcc
//
LOCUS       DATAZA010000007        10724 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3133681, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000007 DATAZA010000000
VERSION     DATAZA010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 10724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10724
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3133681"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..1601)
                     /locus_tag="VHZ56_00120"
     CDS             complement(81..1601)
                     /locus_tag="VHZ56_00120"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4296403.1"
                     /translation="MRSTEASGVGSDGFRLEFGRGLIEALTSLIGAVSPVSCAIALTA
                     ILAATLFVGFDAVRSVADSNQRAALVAQLRADQPLLGRQFAADPVRAPAMARNDAWTQ
                     IGERGAIAYGLALLAAALAFRRRAPVVPDRQLAIADLLATIPFGVACWTDEGRLVVCN
                     PQYGARLAADATELRAGASYSASIKRLVEGGYMQLISEDEGNRVLELHREDGSCMMFD
                     ERPLNGGGFVTLVSDVTESRRTDNLLSSIREEQRVLARRYHEEKLRAEAASRSKTSFL
                     AHLSHDIRTPLNHIIGFAELMRHQTYGPLGDARYAGYVETIKSSGERLLGFFASILDL
                     AELEGGRRVLEEDELGADELLRAVSQRFSAQAQRAHITLSLGTPCGALLVGDRFSLER
                     MLGNLVDNAIRFTPAGGRVSLAAHAGSDGVVLEVGDTGIGMGPERLAALSQPFAFGDA
                     ALTRDREGAGLGLAIARTIVELSGGRLAIDSRPGLGTTVAVSLPLLSLDRRIDAAA"
     gene            complement(1779..4415)
                     /gene="pepN"
                     /locus_tag="VHZ56_00125"
     CDS             complement(1779..4415)
                     /gene="pepN"
                     /locus_tag="VHZ56_00125"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018701224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HEX4296404.1"
                     /translation="MRTETEHTIYLKDYAPSPYRVDRIELDVRIAPGVSQVRALLSIS
                     PREGTVPGTPLVLDGDELRLNSVAIDGLPLALTAYEVAPTGLTIVEPPARSFVLETEV
                     TLEPEKNLRLMGFYRSGGTWCTQCEPEGFRRITYALDRPDVLAPFKVRMTADKVLAPV
                     LLSNGNLVDHGELEGGQHFAVWEDPFPKPSYLFAMVAGDLGSIHDSFVTASGRKVALG
                     VYCTHGKEDECLWAMDSLKRSMAWDERRFGREYDLDIFNIVAVSDFNFGAMENKGLNI
                     FNDKLVFARPETATDDDYYSVERVIAHEYFHNWTGDRITCRDWFQLCLKEGLTVYRDQ
                     EFTSDERSRAVKRIDDVRTLRAAQFPEDASPLAHPPRPDRYREINNFYTTTVYEKGAE
                     IVRMLATLLGEAGFRKGMDLYFERHDGEATTIEAFVKVFEDANGVDLQQFQTWYLQAG
                     TPEVTVSDSYDAASQTYRLTLSQNTAPTPGQAEKQPLVVPVKFGLIGPNGSPMGWSSA
                     SGDVRGDLLVLERQQATFEFKGVANRPVPSLFREFSAPVKIVSGATQADRLFLARHDS
                     DPFNRWQALQDVAMALMLGAIGGTPWADADIAALAAALEETVTSPALDPAFKALALSL
                     PSEQLVARTLGSNVDPDRIRAVRRELLRGLVARLEDTLIAAYGAAASTLPYAPDTAQA
                     GQRSLKNQVLGLLVVGGSAQGPRLAQAQYGAATNMTDRFLGLAHAVSAWTADAEAMLG
                     HFRTMYTADPLVFDKWLALSATIVRDDVIDRVRAILADPVFPANNPNRLRALLGSFAN
                     GNPTQFARADGAGFRYIGEIVSDLDKRNPQVAARLLTAFRSWRSFEPVRMAQAESTLK
                     TLRDAGGLSRNTADILERTLGG"
     gene            4625..6484
                     /locus_tag="VHZ56_00130"
     CDS             4625..6484
                     /locus_tag="VHZ56_00130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011581507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4296405.1"
                     /translation="MLRWFEARIDPYPSAEPVQPPTTMLGFFLFYLGGAKRWLLLMAT
                     LTAVIALSEVVMFGFVGDIVDWLSKADRATFLATQGWPLLLMGLFVLVLLPLVQTLQS
                     MVVNQTMMPNVPQRIRWTLHRWVLRQSMSYFQDEFAGRISSNLMQTALAIRDASMKVF
                     DVLNYVTFYFLGALVLAASNDWRLAIPFVGWLVIYLVLLRFFVPRMTEVSNRQAAARA
                     LMTGRVVDAYTNISTVKLFSHSQREEGYAREAMEEFLPTAYRQMRLASYLNVAVYTLN
                     LALLASIFGIGIYLWLGSLVTPGAIAAAATLCLRLIGMSQWLMWEISALFENVGMVRT
                     GINAFALPSTVTDRPGAPALHVTQGDIRFEQVTFHYGKSDGVIAGLDLHIRPGEKIGL
                     VGRSGAGKSTIVNLLLRFYDTEQGAIRIDGTDIASVTQESLRANIGVVTQDTSLLHRS
                     VRENIAYGRPDASPAEIVAAAKLAAAHDFIVGLADGKDRTGYDAHVGERGVKLSGGQR
                     QRIAIARVLLKNAPILVLDEATSALDSEVEAAIQEQLAALMHGKTVIAIAHRLSTIAA
                     LDRLVVIDQGRIVEEGTHAELLDLGGEYAKLWQRQSGGFLEADADRPAEEAAE"
     gene            6575..8449
                     /locus_tag="VHZ56_00135"
     CDS             6575..8449
                     /locus_tag="VHZ56_00135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007198542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4296406.1"
                     /translation="MSVFSPLHKFFELRIDPFGRTGELRPPAVTWQFFWFYIRQAKGA
                     FLALLGLGGAVALIEAALFYYVGRLVDILDGSKAADGWGGLVAQHGAELVMMLVVVLG
                     VRFVVTWLSAAVEEQTVTIGFYNRVRWQAYSHVIRQNLTFFQNDFAGSIASKVWQSGN
                     AVGDFMVSLLQVVWFIGIYTLTTLVLVGQLDWRLAAAVVAWIVAFGFMARYYVPRMRK
                     YSAAAAEQASALSGRLVDSYANIQTLKLFGTIDGDDRFVRGGFDTFLAATTRLARTLV
                     GVRSAMGMLSGLAIVGIAALSVHLWTEGLITVGGVAFTSGLVLRLYNLLGRLMNQLNG
                     LMRNWGTAQNSAELIARPLGLVDAPDAVPLVVTAGGIRFDKVSFNYENALPVIDSLDL
                     ELKPGERVGLIGRSGAGKSTIVNLLLRFYDVQGGAISIDGQNIARVTQESLRANIGVV
                     TQDTSLLHRSIRANLTYGRPDATDDEMFAAAALAEADEFIEQLIDQKGRTAYETFVGE
                     RGVKLSGGQRQRIAIARVLLKNAPILVLDEATSALDSEVEAAIQEQLASLMHGKTVIA
                     IAHRLSTIAAMDRLVVLDAGRIVEQGTHAQLLARGGPYARLWQRQSGGFLDVDAKAAE
                     "
     gene            complement(8498..8815)
                     /locus_tag="VHZ56_00140"
     CDS             complement(8498..8815)
                     /locus_tag="VHZ56_00140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018430181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEX4296407.1"
                     /translation="MTKFLFSYHGGNPPSNPQEGEKTMKAWGDWMGGLGKALVEPGNP
                     TGASKTVGSDGKISAGGGANAVTGYSIVEAKDLDAAVAMAKTCPQLAAKGTIEVAEIT
                     PVM"
     gene            complement(8846..9595)
                     /locus_tag="VHZ56_00145"
     CDS             complement(8846..9595)
                     /locus_tag="VHZ56_00145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX4296408.1"
                     /translation="MDAVFKALSDPTRRQLLDALRDRGGLTLTELEQGLGMTRFGVMK
                     HLRVLEEANLVLSRRSGRFKHHYLNALPIQEVADRWMAPYGKPLARFALDLKNRLEGP
                     PAMTDKPDLVLATYIRTTPGALWDAIVNPEKTRHYYYGGRVQPGDLRVGSRFFYLDPM
                     GEMNLDGEILEVDPPRKLVTTFKAMWAPDGELTRVMYEIEPMGEVCKLTLTHYDVARS
                     KSGATEGWAIILSGLKTYLETGRDLDIPVEG"
     gene            9771..>10724
                     /locus_tag="VHZ56_00150"
     CDS             9771..>10724
                     /locus_tag="VHZ56_00150"
                     /inference="COORDINATES: protein motif:HMM:NF012906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 2 protein"
                     /protein_id="HEX4296409.1"
                     /translation="MARSPAVAPQPAGYSEIDLRGPYALTSPARKVKARTIALPGDVH
                     TALLAAGDIPDPYFGANEQAVMWVHATPWTVERRFTAAASDIDGYLTLTLENVDCIAT
                     VLLNGEAIARTQNQFVRYDIDVTGKLRAGTNTLRVEFAVTQDVARARADAHPFPLPFT
                     RNYLSNGLPGVPLNFVRKTACHAGWDWGICLMPTGIYGRMAIRRSRLARQESVTVEQA
                     HGRNTVELSITTRVFAFAEGSVELTHEIAGQKLADKVVVRPGDNVFVHNLTIKNPKLW
                     WPNGQGEQPLYELWTTLDGEVTTRRIGLRKLEWIVEKDAIDH"
BASE COUNT         1647 a         3727 c         3547 g         1803 t
ORIGIN      
        1 cgcctcaagg acgatctggt cgagatgcag ggcgaggtga gccgcgccgc cgcggcctgg
       61 tacgcgcggg cccggccgct ttaggccgcc gcgtcaatcc ggcgatcgag gctcagcagc
      121 ggcagcgaca cggcgaccgt ggtgccgagg cccggccggc tgtcgatggc cagtcggccg
      181 cccgacagct cgacgatggt gcgcgcgatg gcgaggccga gtccggcgcc ttcgcggtcg
      241 cgcgtcagcg ccgcgtcgcc gaaggcgaaa ggctgcgaca gcgccgccag ccgctccggc
      301 cccatgccga tgccggtgtc gccgacctcg agcaccaccc cgtcgctccc ggcatgtgcc
      361 gcgaggctga cgcggccgcc ggccggggtg aagcggatgg cgttgtcgac gagattgccc
      421 agcatccgct cgagcgagaa gcggtcgccg accagcagcg ccccgcacgg ggtgccgagc
      481 gacagcgtga tgtgcgcccg ctgcgcctgc gccgagaacc gctgcgatac cgcgcgcagc
      541 agctcgtcgg cgccgagctc gtcttcctcc agcacccggc ggccgccctc gagctcggcg
      601 agatcgagga tcgaggcgaa gaacccgagc agccgctcgc ccgagctctt gatggtctcg
      661 acatagccgg catagcgcgc gtcgcccagc ggcccgtagg tctggtgccg catcagttcg
      721 gcaaagccga tgatgtggtt gagcggcgtg cggatgtcgt ggctgagatg ggcgaggaac
      781 gaggtcttcg accggctcgc cgcctcggcc cgcagcttct cttcgtgata ccggcgggcg
      841 aggacgcgct gctcctcgcg gatcgagctc agcaggttgt cggtgcgccg gctctcggtc
      901 acgtcgctga ccagcgtgac gaagccgccg ccgttcagcg gccgctcgtc gaacatcatg
      961 cacgagccgt cctcgcggtg cagttcgagc acgcggttgc cctcgtcctc gctgatcagt
     1021 tgcatgtagc cgccctcgac cagtcgcttg atcgaggccg aataggaggc cccggcccgg
     1081 agctcggtgg cgtcggccgc gagccgcgca ccgtactgcg ggttgcagac gaccagccgg
     1141 ccctcgtcgg tccagcaggc gacgccgaat ggaatggtgg cgaggaggtc ggcgatcgcc
     1201 agctggcggt cggggaccac cggcgcgcgc cgccggaagg cgagggcggc cgccagcagc
     1261 gccagcccgt aggcgatcgc cccgcgctcg ccgatctgcg tccaggcgtc gttgcgcgcc
     1321 atcgccggcg cccgcaccgg gtcggctgcg aattgccggc cgagcagcgg ctggtccgcc
     1381 cgcaactgcg ccaccagcgc ggcgcgctgg ttgctgtccg ccaccgagcg gacggcgtcg
     1441 aagccgacga acagcgtggc ggcgagaatc gccgtgaggg cgatggcgca actgaccggc
     1501 gagacggcgc cgatgaggga ggtgagggcc tcgatcaggc cccgcccgaa ttccagccgg
     1561 aatccgtccg acccgacgcc ggatgcctcc gtcgaccgca tgaaatgctc cgccaattgt
     1621 gggaaatcaa cgcaacacca cgccctgatt tgcaatctga atcagagcgt tgcgactgtc
     1681 catagggact tgcggcagac cccgtcgcat ggcgcggatt cgcgagtcgg ctgagtcact
     1741 tagcggctgg agaaaaattc ttctccatta gcatttcgtt aaccgcccag cgtccgctcg
     1801 aggatgtcgg cggtattgcg gctgaggccg ccggcgtcgc gcaacgtctt cagcgtcgat
     1861 tcagcctgcg ccatgcgcac cggctcgaag ctccgccagc tgcggaaggc cgtgagcagc
     1921 cgcgccgcga cctgcgggtt gcgcttgtcg aggtcgctga cgatctcgcc gatgtagcgg
     1981 aagccggcgc catcggcgcg cgcgaactgc gtcggattgc cgttggcgaa gctgccgagc
     2041 agcgcccgca gccggttcgg attattggct ggaaacaccg ggtcggcgag gatggcgcgg
     2101 acgcggtcga tgacgtcgtc gcgcacgatc gtcgcgctca gtgccagcca tttatcgaac
     2161 accagcggat cggcggtgta catggtgcgg aaatgcccca gcatcgcctc ggcatcggcg
     2221 gtccacgccg acaccgcatg ggcgagcccc aggaagcggt cggtcatgtt ggtggccgcg
     2281 ccatactgcg cctgcgccag ccgcggcccc tgcgcgctgc cgccgaccac caggaggccc
     2341 agaacctggt tcttcagcga ccgctgtccc gcctgcgccg tgtcgggagc gtagggcagg
     2401 gtgctggccg ccgcgccata ggccgcaata agggtgtcct cgagccgcgc caccagcccg
     2461 cgcagcagct cgcggcgcac cgcgcggatg cggtcgggat cgacgttgct gccgagcgtg
     2521 cgggccacca gctgttccga cggcaggctc agggccagcg ccttgaacgc cgggtcgagc
     2581 gccggcgagg tcaccgtttc ctccagcgcc gcggcgagcg ccgcgatgtc ggcgtcggcc
     2641 cacggcgtgc cgccgatggc gcccagcatc agcgccatcg ccacgtcctg cagcgcctgc
     2701 cagcggttga acgggtcgct gtcgtggcgg gcgaggaaca gccggtcggc ctgcgttgcg
     2761 ccggacacga tcttcaccgg cgccgagaac tcgcggaaca gcgacggcac cggccggttg
     2821 gcgacgccct tgaactcgaa tgtcgcctgc tgccgctcga gcaccagcag gtcgccgcgc
     2881 acgtcgccgc tggcactgct ccagcccatc ggcgagccgt tcggcccgat cagcccgaac
     2941 ttcaccggca ccaccagcgg ctgcttctcc gcctggcctg gcgtcggagc ggtgttctgg
     3001 ctgagcgtca gcctgtaggt ctggctggcg gcgtcgtagc tgtcgctgac cgtgacctcg
     3061 ggcgtgccgg cctgcagata ccacgtctgg aactgctgca ggtcgacgcc gttggcgtcc
     3121 tcgaacacct tgacgaaggc ctcgatggtg gtggcctcgc cgtcgtggcg ctcgaagtag
     3181 aggtccatgc ccttgcggaa gccggcctcg ccgagcagcg tcgccagcat gcggacgatc
     3241 tcggcgccct tttcgtagac cgtggtcgtg tagaaattgt tgatctcgcg gtagcggtcg
     3301 ggccgcggcg gatgcgccag cgggctggca tcctcgggga actgcgccgc ccgcagcgtc
     3361 cgcacgtcgt cgatgcgctt gaccgcccgc gaccgctcgt cggaggtgaa ttcctggtcg
     3421 cgatagaccg tcagcccttc cttgaggcag agctggaacc agtcgcggca ggtgatgcga
     3481 tcgcctgtcc agttgtggaa atactcgtgc gcgatgaccc gctcgacact gtagtagtcg
     3541 tcgtcggtgg cggtctcggg ccgcgcgaac accagcttgt cgttgaagat gttgaggccc
     3601 ttgttctcca tcgcgccgaa attgaaatcc gacacggcga cgatgttgaa gatgtcgagg
     3661 tcgtactcgc gcccgaagcg ccgctcatcc cacgccatcg agcgtttcag cgagtccatc
     3721 gcccacaggc actcgtcctc cttgccatgc gtgcaataga ccccgagggc cactttgcgg
     3781 ccggaggcgg tgacgaagct gtcgtggatc gagccgaggt cgccggcgac catcgcgaac
     3841 aggtaggacg gcttcgggaa cgggtcttcc cagaccgcga aatgctggcc gccttcgagc
     3901 tcgccgtgat cgaccaggtt gccgttcgac agcagtaccg gcgccagcac cttgtcggcg
     3961 gtcatccgca ccttgaacgg cgccagcacg tcgggccggt cgagcgcgta ggtgatgcgg
     4021 cgaaaaccct cgggctcgca ctgcgtgcac caggtgccgc cggagcggta aaagcccatc
     4081 agccggaggt tcttttcggg ctccagcgtc acctcggtct cgagcacgaa gctgcgcgcc
     4141 ggcggctcga cgatggtgag gccggtcggt gccacctcgt aggcggtgag cgccagcggc
     4201 aggccgtcga tggccaccga attgagcctg agctcgtcgc cgtcgagcac cagcggcgtc
     4261 cccggtacgg tcccctcgcg cggcgaaatg ctgagcagcg cgcggacctg cgagacgccg
     4321 ggcgcgatcc ggacgtcgag ttcgatccgg tcgacccggt acggactggg ggcatagtcc
     4381 ttgaggtaga tcgtgtgctc ggtctcggtg cgcatgcgct tccctggtct ttgccgggtg
     4441 gggctcgccg gggattggca agccgccgat tcgtccggta ttctagccgg ctggatcgac
     4501 cggcctctcc cttttagcgc caaacgcggc agcattggga ggggccggcg aagccggcgc
     4561 gcaccaagcc cctggcgcct ttccgcgtca agcttttgcg ttcaattcaa ttgcaggtgt
     4621 ccccatgctg cgctggttcg aagcccgcat cgatccgtat ccgtccgccg aaccggtgca
     4681 gccgccgacg acgatgctgg gattcttcct gttctacctc ggcggcgcca agcgctggct
     4741 gctgctgatg gcgaccctca cggcggtcat cgcgctgagc gaagtggtga tgttcggctt
     4801 tgtcggcgac atcgtcgact ggctcagcaa ggccgatcgc gccaccttcc ttgccaccca
     4861 gggctggccc ctgctgctga tggggctgtt cgtgctggtg ctgctgccgc tggtgcagac
     4921 gctgcagtcg atggtcgtca accagacgat gatgcccaac gtgccgcagc gcatccgctg
     4981 gaccctgcac cgctgggtct tgcggcagtc gatgagctat ttccaggacg agttcgccgg
     5041 ccgcatctcc agcaacctca tgcagaccgc gctggccatc cgcgacgcgt cgatgaaggt
     5101 gttcgacgtc ctcaactacg tgaccttcta tttcctcggc gcgctggtgc tggccgcctc
     5161 gaacgactgg cggctggcca tcccgttcgt cggctggctg gtcatctacc tcgtgctgct
     5221 gcgcttcttc gtgccgcgca tgaccgaagt ctcgaaccgc caggccgccg cccgcgcgct
     5281 gatgaccggc cgcgtcgtcg acgcctacac caacatctcg acggtcaagc tgttctcgca
     5341 ctcgcagcgc gaggagggct atgcccgcga ggcgatggag gagttcctgc cgaccgccta
     5401 ccggcagatg cggctcgcct cctacctcaa cgtcgccgtc tataccctca atctggcgct
     5461 gctcgcctcg atcttcggca tcggcatcta cctctggctc ggcagcctcg tcacgccggg
     5521 ggccatcgcc gccgccgcga cgctctgcct ccgcctcatc ggcatgagcc agtggctgat
     5581 gtgggagatc tcggcgctgt tcgaaaatgt cggcatggtc cgcaccggca tcaacgcctt
     5641 cgccctgccg agcaccgtca ccgaccggcc gggggcgccg gcgctgcatg tgacccaggg
     5701 cgacatccgc ttcgagcagg tgacgttcca ctacggcaag tcggacggcg tcatcgccgg
     5761 cctcgacctc cacatccggc ccggcgaaaa gatcggcctc gtcgggcgct ccggcgctgg
     5821 caagtcgacc atcgtcaacc tgctgctgcg cttctacgac accgagcagg gcgccatccg
     5881 gatcgatggc accgacatcg cgagcgtcac ccaggaatcg ctgcgcgcca atatcggcgt
     5941 cgttacgcag gatacctcgc tgctgcaccg ctcggtgcgc gagaacatcg cctacggccg
     6001 gccggatgcg agcccggccg agatcgttgc ggccgcgaaa ctggccgcag cacatgactt
     6061 catcgtcggc ctcgccgacg gcaaggaccg caccggctac gacgcgcatg tgggcgagcg
     6121 cggcgtcaag ctcagcggcg gccagcgcca gcgcatcgcc atcgcccgcg tgctgctgaa
     6181 gaacgccccg atcctcgtcc tcgacgaagc cacctcggcg ctcgacagcg aggtcgaagc
     6241 cgcgatccag gagcagttgg ccgccctgat gcacggcaag accgtgatcg ccatcgccca
     6301 ccggctgtcg accatcgccg cgctcgaccg gctggtcgtc atcgaccagg gccgcatcgt
     6361 cgaggagggc acgcacgccg aactgctgga cctgggcggc gaatacgcaa agctctggca
     6421 gcgccaatcc ggcggcttcc tcgaggccga tgccgaccgg ccggcggaag aggccgccga
     6481 atagccggcg gtggtgcgga tcgccgccga acccgcggtg ggcgttgaac tatcggtgac
     6541 ttgtccgcct gcgcttttgg cttaaatagc cgccatgtcc gttttctccc cgctgcacaa
     6601 attcttcgag ctgcggatcg atccgttcgg ccgcaccggc gagctgcggc cgcccgccgt
     6661 gacctggcag ttcttctggt tctacatccg gcaggcgaag ggcgcgttcc tggcgctgct
     6721 ggggctcggc ggcgccgtgg cgttgatcga ggcggcgctg ttctactatg tgggccggct
     6781 ggtcgacatc ctcgatggct cgaaggccgc cgacggctgg ggcggcctcg tcgcgcagca
     6841 cggcgccgag ctggtgatga tgctcgtcgt cgtgctcggc gtccgcttcg tcgtcacctg
     6901 gctctcggcc gcggtcgagg agcagaccgt caccatcggc ttttacaacc gcgtgcgctg
     6961 gcaggcctat tcccacgtca tccgccagaa cctcaccttc ttccagaacg acttcgccgg
     7021 ctcgatcgcc tcgaaggtct ggcagtcggg caacgccgtc ggcgacttca tggtcagcct
     7081 gctgcaggtc gtctggttca tcggcatcta cacgctgacc accctcgtgc tcgtcggcca
     7141 gctcgactgg cgcctcgcgg cggccgtcgt cgcctggatc gtcgccttcg gcttcatggc
     7201 ccgctactac gtgccgcgca tgcgcaaata ctccgccgcc gcggcggagc aggcctcggc
     7261 cctcagcggc cggctggtcg acagttacgc caacatccag accctcaagc tgttcgggac
     7321 catcgatggc gatgaccgct tcgtgcgcgg cggcttcgac accttcctcg ccgccaccac
     7381 ccggctggcc cggacgctgg tcggcgtgcg cagcgccatg ggcatgctct ccggactcgc
     7441 catcgtcggc atcgcggcgc tctcggtgca tctgtggacc gaagggctga tcacggtagg
     7501 cggcgtcgcc ttcaccagcg gcctggtgct gcggctctac aatctgctcg gccggctgat
     7561 gaaccagctc aacggcctga tgcgcaactg gggcaccgcg cagaattcgg ccgagctgat
     7621 cgccaggccg ctcggcctcg tcgacgcccc ggacgccgtg ccgctcgtgg tgacggccgg
     7681 tggcatccgt ttcgacaagg tcagtttcaa ctacgagaac gccctgccgg tgatcgacag
     7741 cctcgatctc gagctcaagc cgggtgagcg cgtcgggctc atcggccgct ccggcgccgg
     7801 caagtcgacc atcgtcaacc tgctgctgcg cttctacgac gtgcagggcg gcgctatctc
     7861 gatcgacggc cagaacatcg cccgcgtcac ccaggaatcg ctgcgcgcca atatcggcgt
     7921 cgtcacgcag gacacctcgc tgctccatcg ctcgatccgc gccaatctca cctatggccg
     7981 ccccgatgcc accgacgacg agatgttcgc cgccgcggcg ctggccgaag ccgacgagtt
     8041 catcgagcag ctgatcgacc agaagggccg caccgcgtac gaaaccttcg tcggcgagcg
     8101 cggcgtcaag ctcagtggcg ggcagcgcca gcgcatcgcc atcgcccgcg tgctgctgaa
     8161 gaacgcgccg atcctcgtcc tcgacgaagc cacgtcggcg ctcgacagcg aggtcgaggc
     8221 ggcgatccag gaacagctcg cgtcgctgat gcacggcaag accgtgatcg ccatcgccca
     8281 ccggctgtcg accattgccg cgatggaccg gctggtggtg ctcgatgccg gccgcatcgt
     8341 cgagcaggga acgcatgccc agctgctggc gcgcggcggg ccctacgccc ggctctggca
     8401 gcggcagtcg ggcggcttcc tcgacgtcga cgccaaggcg gccgaatagc cggaagggcg
     8461 gtcagctcgg cccgcccttc cgttcagctg cgatgcgtca catcacgggc gtgatttccg
     8521 ccacttcgat ggtgcctttt gccgccagtt gcgggcaggt tttcgccata gccaccgccg
     8581 cgtcgaggtc cttggcctcg acgatgctgt agcccgtcac cgcattcgcg ccgccgccgg
     8641 cactgatctt gccgtccgac ccgacggtct tcgatgcgcc ggttggattg cccggctcga
     8701 ccagcgcctt gccgaggccg cccatccagt cgccccaggc cttcatcgtc ttttcgcctt
     8761 cttgcgggtt cgagggcgga ttgccgccat gataggaaaa gaggaatttc gtcatcgtcg
     8821 tttctccctg ttgcagaacg ccggttcagc cttcgaccgg aatgtcgagg tctcggccgg
     8881 tttcaagata ggtcttgagg ccggacagaa tgatggccca gccctcggtt gcgccggatt
     8941 tcgatctggc gacatcgtag tgggtcaggg tgagcttgca cacctcgccc atcggttcga
     9001 tttcgtacat cacccgggtg agctcgccgt cgggcgccca catcgccttg aaggtggtga
     9061 cgagcttgcg cggcgggtcg acttccagga tttccccgtc gagattcatc tcgcccatcg
     9121 ggtcgaggta gaagaagcgg ctgcccaccc gcagatcgcc aggctggacg cgtccgccgt
     9181 agtagtagtg cctggttttc tcgggattga cgatcgcgtc ccagagcgcg ccgggggtcg
     9241 tccggatata ggtggcgagc acgaggtcgg gcttgtcggt catcgcgggc ggtccttcca
     9301 gccggttctt cagatcgagt gcaaaccgcg cgagcggctt gccgtagggc gccatccacc
     9361 ggtcggctac ctcctggatc ggcagcgcgt tgaggtagtg gtgcttgaac cgcccgctgc
     9421 ggcggctcag gacgaggttt gcttcctcca gcacccgcag atgcttcatc accccgaacc
     9481 gggtcatgcc gagaccctgt tcgagctcag tcaatgtcag tccaccccgg tcgcgcaggg
     9541 catcgagcaa ctggcgccgc gtcggatcgc tgagcgcctt gaataccgcg tccacaggct
     9601 ggacgttagg tgaccaaata gtcacatgtc aagccacccc ggatttacat ggtgaccgtg
     9661 cgagtcccat tggcagggca ggggtgcctc gttaagacaa cgacgcggcg cccatcggac
     9721 cattgcttgc ccctccacga ggcatcccga gcgcccgttg gaggacccac atggcgcgat
     9781 cgcccgccgt tgccccgcag cccgccggct attcagaaat cgacctgcga gggccctacg
     9841 ccctgacctc gccggcccgg aaggtgaagg cgaggaccat cgcgttgccc ggcgacgtcc
     9901 ataccgcgct gcttgcggcc ggcgacatcc ccgacccgta tttcggcgcc aacgagcagg
     9961 cggtgatgtg ggtgcatgcg acgccgtgga cggtggaacg ccggttcacg gcagccgctt
    10021 ccgatatcga tggttacctg accctgacgc tcgagaacgt cgactgcatt gcgacggtcc
    10081 tcctcaacgg cgaggcgatc gcccgcaccc agaaccagtt cgtccgctac gacatcgacg
    10141 tcaccggcaa gctgcgcgcc gggaccaaca ccctgcgcgt cgaattcgcg gtgacccagg
    10201 atgtggccag ggcgcgcgcc gatgcgcacc cgttcccgct gcccttcacc aggaattatc
    10261 tgagcaacgg cctgcccggc gtgcccctga acttcgtgcg caagaccgcc tgccacgccg
    10321 gctgggactg gggcatctgc ctgatgccca ccggcatcta cggccgcatg gcgatccgca
    10381 ggtcgcgcct ggcgcggcag gaaagcgtca ccgtcgagca ggcgcacggc cgcaacacgg
    10441 tcgagttgtc gatcaccacg cgggtcttcg ctttcgccga aggctcggta gagctgaccc
    10501 acgagatcgc cggccagaag cttgccgaca aggttgtcgt ccggcccggc gacaatgtct
    10561 tcgtccacaa cctcaccatc aagaacccga aactctggtg gccgaacggg cagggcgaac
    10621 agccgctcta cgagctgtgg acgacgctcg acggcgaagt caccacgcgc aggatcggcc
    10681 tccgcaagct ggagtggatc gtcgagaagg acgccatcga ccac
//
LOCUS       DATAZA010000008         1564 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2553517, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000008 DATAZA010000000
VERSION     DATAZA010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2553517"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..800)
                     /gene="uxuA"
                     /locus_tag="VHZ56_00155"
     CDS             complement(<1..800)
                     /gene="uxuA"
                     /locus_tag="VHZ56_00155"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008927 - mannonate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006064 - glucuronate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HEX4296410.1"
                     /translation="MLQTWRWFGPIDKVSVEDARQAGAEAIVSALHHLPAGQVWTAEE
                     IARRQREVRAGGLEWKVVESLPVSEEIKLGGPRAEAHYEAWRISLGNLAAAGITTICY
                     NFMPVLDWTRTALHWQTPQTTRTMRFDLVDFAVFDLHIFGRDGADDYPPAIVETAAGR
                     HATMSDADRQVLMSSVGAGLPGEGAAPSIDALRRRVGAYAGLDGAALRANLVAFLKHV
                     VPTAEKLGMCIGCHPDDPPWPLLGLPRVMSTADDFAAVFDAVPSLANG"
     gene            complement(803..>1564)
                     /locus_tag="VHZ56_00160"
     CDS             complement(803..>1564)
                     /locus_tag="VHZ56_00160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020011950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4296411.1"
                     /translation="IEAMQHGKDVMADKPGCTTLDDLAAIERTVSETGRIWSVNFSER
                     FLVPSVGKAHELMAAGAIGKVVQTIGLGPHRLNAKLRDPWFFDRRQYGGILTDIASHQ
                     IDQFLLFTGSTDAEIVAATARNLGHPQYPGLQDFGELLLRSEHGHGYIRVDWFTPDGL
                     PTWGDGRLLILGTEGYIELRKYVDVAGRPGTNHLFVVNGTRNDYIACEGLPLTYFADF
                     SNDVLNRTATVMPQAHAFKVMELAIKAQMLAEGGA"
BASE COUNT          270 a          518 c          511 g          265 t
ORIGIN      
        1 atgccattgg cgaggctcgg gaccgcgtcg aacacggcag cgaaatcgtc cgcggtcgac
       61 atcacgcgcg gcaggccgag cagaggccag ggcggatcgt ccggatgaca accgatgcac
      121 atgccgagct tctcggccgt gggcacgacg tgcttgagga aggcgacgag gttcgcgcgc
      181 aaggctgccc catcaaggcc tgcataggca ccgacgcgcc tgcgcagggc atcgatgctc
      241 ggcgccgcgc cctcgccggg caggcccgcg ccgacgctgc tcatcagcac ttgccgatcg
      301 gcatcgctca tcgtcgcatg gcggccggcc gcggtctcga cgatcgccgg cggatagtcg
      361 tcggcgccgt cgcgaccgaa gatgtggagg tcgaacacgg caaagtcgac aaggtcgaag
      421 cgcatggtac gcgttgtttg cggcgtctgc caatggagcg cggtgcgggt ccagtcgagc
      481 accggcatga aattgtagca gatggtggtg atcccggccg cggcgagatt gccgaggctg
      541 atccgccacg cctcgtagtg cgcctcggcc cggggaccgc ccagcttgat ctcctcggac
      601 accggcaggc tctcgacgac tttccattcg agcccgccgg cgcggacctc gcgttggcgc
      661 ctggcaattt cctcggcggt ccacacctgg cctgcgggca gatggtgcag cgcgctgacg
      721 atggcctcgg cacccgcctg tcgcgcatct tccacgctca ccttgtcgat cgggccgaac
      781 cagcgccagg tctgcaacat gctcaggcgc ccccctcggc cagcatctgc gccttgatcg
      841 cgagctccat caccttgaag gcatgggcct gcggcatcac cgtcgccgtc cggttcagaa
      901 cgtcgttcga gaaatcggcg aaataggtca gcggcaaccc ctcgcaggcg atgtagtcgt
      961 tgcgggtgcc gttgacgacg aacagatgat tggtaccggg ccgccccgcg acgtcgacat
     1021 atttcctgag ctcgatatag ccctcggtgc cgagaatcag cagccgcccg tcgccccagg
     1081 tcggcagtcc gtcgggggtg aaccagtcga cgcggatata gccgtggcca tgctcgctgc
     1141 gcagcagcaa ctcgccaaaa tcctgcagcc ccggatactg cggatgcccc agattgcggg
     1201 ccgttgcggc gacaatctcg gcatcggtcg aaccggtgaa gagcaggaac tggtcgatct
     1261 ggtgcgaggc gatatcggtg aggataccgc catattgtcg gcggtcgaag aaccacggat
     1321 cgcgcaactt cgcattgagc cggtgcggcc cgaggccgat ggtctgcact accttgccga
     1381 tggcaccggc ggccatcagt tcgtgcgcct tgccgaccga cggcaccagg aaccgttcgg
     1441 aaaaattcac cgaccagatg cggccggttt cgctcaccgt acgttcgatc gctgcaaggt
     1501 cgtcgagcgt ggtgcagccc ggcttgtcgg ccatcacgtc cttgccatgc tgcatcgctt
     1561 cgat
//
LOCUS       DATAZA010000009         5875 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_464760, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000009 DATAZA010000000
VERSION     DATAZA010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5875
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_464760"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(195..593)
                     /locus_tag="VHZ56_00165"
     CDS             complement(195..593)
                     /locus_tag="VHZ56_00165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018066143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX4296412.1"
                     /translation="MLQNFEHVGMTVSDIDQSLHFYRDLIGMNFKLRRATPDGRGEVA
                     FVEAAGAQLELIKPSNDVKTPARRAPDTEAGVRHLTFNFDDMDAVFDKLVAAGVPVVE
                     KPRDAYNRDILSRVAFVLDPDGIVIELAQR"
     gene            complement(601..1623)
                     /locus_tag="VHZ56_00170"
     CDS             complement(601..1623)
                     /locus_tag="VHZ56_00170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011578922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4296413.1"
                     /translation="MPSNEPIGFGVIGVGFGKGRAEIIKTTPGARLVQVSSRDGDKAK
                     AAGEELGAEWTADYHDMLKRDDIQVITLYTPSAQHRDIGIEAANAGKHLIVTKPLEIT
                     LQRIDDMIAACDANRVKMATEYVVRYEPANYALYRAAHDGSLGKLILGEFAEKLYRPQ
                     WYYELDGGWRSRWKTGGGGTVINQGIHTLDQMVWLFGPVDSITAQAGAFASKIESEDT
                     AVVLVKFKSGAVGTFIATTTFHNPKPGGRYGGGTVRRIEINGDKGSGRIDDETLSMLY
                     VKDGPELPRTLAPPAASVFDDMVRWVRDDGYASPTLVKPADSRASMALVLAIYESARE
                     GKTVHL"
     gene            complement(1639..2424)
                     /locus_tag="VHZ56_00175"
     CDS             complement(1639..2424)
                     /locus_tag="VHZ56_00175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006725139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEX4296414.1"
                     /translation="MSAFDAAAMKGRKAEGRTPVIAYEQVVKSFGSVTVLHGIDAHVN
                     KGEVVCLIGPSGSGKSTLLRCTNALETLSGGRVLFEGEPLPQGKDARLVRRKMGMVFQ
                     SFELFPHMTALGNVMSGPTTVLGTSKADARARATDLLGKVGLADKAESYPSQLSGGQQ
                     QRVAIARSLAMDPQVMLFDEPTSALDPETIGEVLNVMKALAEEGMTMLVVTHEMSFAR
                     RVADWVLVFDKGNVVEEGPPTQIFDTPLTDRTRDFLSHLGWGG"
     gene            complement(2421..3080)
                     /locus_tag="VHZ56_00180"
     CDS             complement(2421..3080)
                     /locus_tag="VHZ56_00180"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX4296415.1"
                     /translation="MSFDWGAIWPYRDQLLAGIGVTIALAVVTMLIAIPLGIIVMLMR
                     ISGIKPLAWIATVFVEIFRNTPLLLLVYWAYYAVPQITHLSVSALVTGVVALVLNTAA
                     YNSENFRAGVNSIRKGQMEAGLSLGMSWGEAMRKIVLPQAIRRIVPVLASSWVSLFKA
                     TSLVSAIGVYELAHVALEIRAENYRVLETLTTLALIYWVLAYPQAKLVDWLNRKYGAM
                     E"
     gene            complement(3077..3739)
                     /locus_tag="VHZ56_00185"
     CDS             complement(3077..3739)
                     /locus_tag="VHZ56_00185"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX4296416.1"
                     /translation="MGFDFSVLKYWPFILSGFELNILLAAATAVTASIVGLALGLMRL
                     YGPRWLSIIVTFYIDTMRSIPELVVLIWIFFSIPILAHISLPPFWAALFALTVQVAAY
                     VAEVVRAGLTSIRAGQTAAGRALGMSHAQILRRVLLPQAVVRMLPAYGSLLTMIIKDT
                     AIASMVAVPELMQHSETLAQRTYRGIEVYTIAMVLFFIILFPTTRIVEFIYRRVQHLG
                     RS"
     gene            complement(3803..4627)
                     /locus_tag="VHZ56_00190"
     CDS             complement(3803..4627)
                     /locus_tag="VHZ56_00190"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX4296417.1"
                     /translation="MLSIKSAALATALALSGLVATNALAQDLPAPPAPGVSARVDAIK
                     ASGFLRVGVLNNEPWLVQNTTGDGPPWSGPAWLLAQTYAKLLGVQVQEVPVSAETKVT
                     LLAANQADISITALGESPDRMKVVDFVTYSNNSTCMIGKADDPKLANVKTIDDLNDPG
                     MDLVFGIGAPDDTYLKARFPKAQVRGVTTAIDEVLAGHADATPYNRIQAVRLMKKVPG
                     LVSFPTDCIRSTEQASDVGMAIDKNQPEFLAWLQAVATAMKPQVEAEEERAINALD"
     gene            complement(4689..5723)
                     /locus_tag="VHZ56_00195"
     CDS             complement(4689..5723)
                     /locus_tag="VHZ56_00195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018688243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4296418.1"
                     /translation="MPVSPITVAALGLDTLHAPGMLAGMLAAGAVAKGFWTDGTPGPL
                     ENYLKRFPDVPRYDDAAALIEAPDVDLVLISAIPDQRAKLAVAAMEAGKDVMVDKPGC
                     VTLDELDEIRRAVARTGRIWSVNYGEHFEQPSVLRAAELIAEGAIGRVIQTIGLGPHR
                     LNRPLRRPWFFERKRHGGILADIGSHHISQFLLFTGVKTAEVVSASVANYAHPGDPEL
                     EDFAEMLLRSDGVSGYIRLDWLGPDSLPHPGDGRVTILGTEGYIELRKYLDLNNRPGA
                     HHIYLTNGTRSEHIDAAPTPITYFRQLAADVRERTETAMTQSHCFEVMRLALNAEAMA
                     TRLGGLAMAS"
BASE COUNT         1001 a         1794 c         2037 g         1043 t
ORIGIN      
        1 acaattcact ttcgcccgga acgcaggatg gggtcctcgg tgaaaggtcc cggcatttcg
       61 ggtagtgtgg aaggttgctc ccggacgatt tgggattcga cgtctctctc gcttgctcga
      121 cgccggcacg gaccagcccc ccaccaagat cgacggctct ctggtcagtg cgacaggagc
      181 cgatgtcgcg gtcgctagcg ctgagctagc tcgatgacga tgccgtcggg gtccagcacg
      241 aaggccacgc gcgagaggat gtcgcggttg taggcatcgc gtggcttttc gaccacgggc
      301 acaccggcgg ctacgagttt gtcgaacacc gcgtccatgt cgtcgaaatt gaaggtcagg
      361 tgccgcacgc cggcttcggt gtcgggtgcc cgacgggcgg gcgtcttgac gtcattggac
      421 ggcttgatga gctcgagctg ggcgccggcc gcctcgacga atgcgacctc gccgcggccg
      481 tcgggggtgg cccggcggag cttgaaattc ataccgatca ggtcgcgata gaaatgcagg
      541 ctctggtcga tatcgctgac ggtcatgccg acatgttcga agttctggag catttggtcc
      601 tcagaggtga acggttttgc cctcgcgggc ggattcgtag atcgccagca ccagcgccat
      661 cgaggcacgg gagtcggcag gcttgaccag tgttggcgac gcgtagccgt cgtcgcgtac
      721 ccagcgcacc atgtcgtcga agacgctggc ggccggtggc gcaagggtgc gcggcaactc
      781 cgggccgtcc ttgacgtaga gcatgctgag cgtctcgtcg tcgatccggc cggagccctt
      841 gtcgccattg atctcgatgc ggcgcacggt gccgccgcca tagcggccgc cgggcttggg
      901 gttgtggaag gtggtcgtcg caatgaatgt gccgaccgcg ccggacttga acttcaccag
      961 caccacggcg gtgtcttccg actcgatctt gctggcaaag gcgcccgcct gcgcggtgat
     1021 gctgtcgacc ggcccgaaca gccagaccat ctggtcgagt gtgtggatgc cctggttgat
     1081 cacggtgccg ccgccgcccg tcttccagcg cgagcgccag ccgccgtcga gctcatagta
     1141 ccattgcggg cggtagagct tttccgcgaa ctcgcccagg atcagcttgc ccagcgagcc
     1201 gtcatgcgcg gcccggtaga gcgcgtagtt tgccggctcg tagcgcacca catattcggt
     1261 cgccatcttc actctgttgg cgtcgcaggc ggcgatcatg tcgtcgatgc gctgcagcgt
     1321 gatctcgagc ggcttggtga cgatcaggtg tttgccggcg ttggcggcct cgatgccgat
     1381 gtcgcgatgc tgggccgacg gcgtatagag cgtgatcacc tggatgtcgt cgcgcttcag
     1441 catgtcgtga tagtcggcgg tccactcggc gccgagttct tcgccggcgg ccttggcctt
     1501 gtcgccatca cggctcgaga cctgcaccag cctggcgccg ggcgtggtct tgatgatttc
     1561 ggcgcggccc ttgccgaagc cgacgccgat gacgccgaag ccgattggtt cattactggg
     1621 catgattggt ccttgagatc agccgcccca gccgagatgg ctgaggaagt cgcgggtgcg
     1681 gtcggtaagc ggggtgtcga agatctgcgt gggcgggcct tcctcgacga cattgccctt
     1741 gtcgaagaca agcacccagt cggcgacacg gcgggcaaag ctcatctcgt gggtcacgac
     1801 cagcatggtc atgccctctt cggccagcgc cttcatgacg ttgagcacct cgccgatggt
     1861 ttccgggtcg agcgccgagg tcggctcgtc gaacagcatc acctgcgggt ccatggcgag
     1921 cgagcgggcg atggcgacgc gctgctgctg gccgcccgag agctggctgg gatagctctc
     1981 ggccttgtcg gcaagcccga ccttgccgag caggtcagtc gcgcgggctc tggcatcggc
     2041 cttggaggtg ccgagtactg tggtcggtcc ggacatcaca ttgcccagcg ccgtcatgtg
     2101 cgggaacagc tcgaagctct ggaacaccat tcccatcttg cggcggacaa ggcgtgcgtc
     2161 cttgccctgc gggaggggct cgccctcgaa cagcacccgg ccgccgctca gcgtctcgag
     2221 cgcgttggtg cagcgcagca gcgtcgactt gcccgagccc gaggggccga tgaggcacac
     2281 cacctcgccc ttgttcacat gcgcatcgat gccgtgcagc accgtgaccg agccgaagct
     2341 cttgaccacc tgctcatagg cgatgaccgg ggtcctgcct tcggccttcc ggcccttcat
     2401 ggcggcggcg tcgaacgcgc tcattccatc gctccgtatt tgcggttgag ccaatcgacc
     2461 agcttggcct gcggataggc gaggacccag tagatcagcg ccagggtggt cagcgtttcg
     2521 agcacgcgat agttctcggc gcggatttcg agcgccacgt gcgcgagctc gtagacgccg
     2581 atggccgaga ccagcgaggt cgccttgaac agcgacaccc agctcgacgc cagcaccggc
     2641 acgatgcggc ggatcgcctg cggcagcacg atcttgcgca tcgcctcgcc ccagctcatg
     2701 cccagcgaca gcccggcctc catctgtccc ttgcggatcg agttgacccc ggcgcggaag
     2761 ttttccgaat tgtaggcggc ggtgttgagc accagcgcca ccacgccggt caccagggcc
     2821 gacaccgata gatgcgtaat ctgcggcacc gcatagtagg cccagtagac gagcagcagc
     2881 agcggcgtgt tgcggaagat ttcgacgaag acggtcgcaa tccacgcgag cggtttgatg
     2941 cccgagatgc gcatcagcat gacgatgatg ccgagcggga tggcgatcag catggtgacc
     3001 acggcgagcg cgatggtgac accgatgccg gcgagcagtt ggtcgcgata cggccagatg
     3061 gcgccccagt cgaagctcat gaccggccca gatgctggac gcgccggtag atgaattcga
     3121 cgatgcgcgt ggtggggaac aggatgatga agaacagcac catggcgatg gtgtagactt
     3181 cgatgccgcg ataggtacgc tgcgccagcg tctcggaatg ctgcatcagc tcgggcaccg
     3241 cgaccatcga ggcgatggcg gtatccttga tgatcatggt cagcagcgac ccataagcgg
     3301 gcagcatgcg caccaccgcc tgcggcagca gcacccgacg cagaatctgc gcatgcgaca
     3361 tgccgagcgc ccggccggcg gcggtctgcc cggcccggat cgacgtgagg ccggcgcgca
     3421 ccacctcggc gacataagcc gcgacctgta cggtaagagc gaacagcgcg gcccagaaag
     3481 gcggcagcga gatatgggcg aggatgggga tcgaaaagaa gatccagatc agcaccacga
     3541 gctcggggat cgagcgcatg gtgtcgatgt agaaggtcac gatgatgctg agccagcgcg
     3601 ggccatagag ccgcatcagg cccagcgcga gcccgacaat cgatgcggtg acggccgtcg
     3661 ccgcggcgag caggatattg agctcgaagc cggagaggat gaatggccag tatttgagga
     3721 ccgagaagtc gaatcccatg cgcggttccg ggatggcgag aagcccgcgg gcgacagagc
     3781 ggccgcgggc ctgggagaag acctagtcga gggcgttgat ggcgcgctct tcctcggctt
     3841 cgacctgcgg cttcatcgcg gtggccacgg cctgcagcca ggcgaggaac tcaggctggt
     3901 tcttgtcgat ggccatgccg acgtcggagg cctgctcggt ggagcggatg cagtcggtgg
     3961 gaaacgacac gaggcccggc accttcttca tcagacgcac cgcctggatg cggttgtaag
     4021 gagtggcatc ggcgtggccg gccagcacct cgtcgatggc agtggtgacg ccgcgcacct
     4081 gggccttggg aaagcgggcc ttgagatagg tgtcatcggg cgcgccgatg ccgaagacca
     4141 ggtccatgcc ggggtcgttg agatcgtcga tggtcttgac gttggcgagc ttggggtcgt
     4201 cggccttgcc gatcatgcag gtcgagttgt tggagtaagt cacgaagtcg accaccttca
     4261 tgcggtcggg gctttcgcca agggcggtga tcgagatgtc agcctggttg gcggccagca
     4321 gggtcacctt ggtctcggcc gagactggca cttcctgcac ctgtacgccc aggagcttgg
     4381 cataggtctg ggccagcagc catgccggac cgctccacgg cgggccgtcg ccggtggtgt
     4441 tctgcaccag ccaaggctcg ttgttgagca cgccgacgcg caggaagccg gatgccttga
     4501 tggcgtcgac gcgggcgctg acgccgggag ccggcggagc cggcaagtcc tgggccagcg
     4561 cattggtggc gacgagcccg ctgagggcga gggctgtggc cagggccgca gatttgatcg
     4621 agagcatgtt gaggtctcct ccctgtaatg tgttttggca acttggccgg cgacgggacc
     4681 gccggaaatc agctggccat ggcgaggccg ccaaggcggg tcgccattgc ttctgcgttg
     4741 agcgccagcc gcatcacctc gaaacagtgc gattgcgtca tggcggtttc ggtccgctcg
     4801 cgcacgtcgg cagcgagctg gcggaaatag gtgatgggcg tcggcgcggc gtcgatatgc
     4861 tcggatcggg tgccgttggt caggtagatg tgatgggcac cgggccgatt gttgagatcg
     4921 agatatttgc gcagctcgat gtagccctcg gtgccgagga tggtgacgcg cccgtcaccc
     4981 ggatgcggca gcgagtccgg tccaagccag tcgagccgga tgtagccgct gaccccgtcc
     5041 gaacgcagca gcatctcggc gaagtcctcg agctcgggat cgccgggatg ggcgtaattg
     5101 gcgacgctgg cgctcacgac ttcggcggtc ttgacgccgg tgaagaggag aaactggctg
     5161 atgtggtgcg agccgatatc ggcgaggatg ccgccatgcc gcttgcgctc gaagaaccag
     5221 ggccggcgca gcggccggtt gagccggtgc ggcccgagcc cgattgtctg gatgacgcgg
     5281 ccgatggcgc cctcggcgat cagttcagcg gccctgagca ccgaaggctg ctcgaaatgc
     5341 tcgccataat tcaccgacca gatgcggccg gtgcgggcga cggcgcgcct gatctcgtcc
     5401 agctcgtcga gcgtgacgca gccgggcttg tcgaccatca cgtccttgcc cgcttccata
     5461 gccgcgacgg cgagcttcgc ccgctggtcg ggaatggccg agatcagcac gaggtcgacg
     5521 tcaggcgctt cgatcagcgc cgccgcatcg tcgtaccgcg gcacatcggg gaagcgcttc
     5581 agatagttct cgagcggccc cggggtgccg tcggtccaga aacctttggc cacggccccc
     5641 gccgccagca ttcctgccag catgccggga gcgtgcaggg tatcgaggcc taacgcagct
     5701 acggtgatgg gcgagacggg catggttcca atccggcggc agcttggcgc gccatccagg
     5761 ttgcgatctt agtatggtag tatgacactt aagtcaagaa aggggcactg cgaccttagc
     5821 tgcatcggcg ttagacctgc ccgaattccg ggtgtgacaa cgtcttcatc acgcc
//
LOCUS       DATAZA010000010         1666 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1277119, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000010 DATAZA010000000
VERSION     DATAZA010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1666
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1277119"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VHZ56_00200"
     CDS             complement(<1..219)
                     /locus_tag="VHZ56_00200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296419.1"
                     /translation="MAKWLRKIAPSAARASMCGVFSSAWPAAPRHSPRHWSAVMKRKF
                     SSVSEHQDVAAGQRHLHPLVVRRRRRVLV"
     gene            131..1591
                     /locus_tag="VHZ56_00205"
     CDS             131..1591
                     /locus_tag="VHZ56_00205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007528609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEX4296420.1"
                     /translation="MGAAGHALLKTPHIDALAADGAIFLSHFANAAPCSPARACLYTG
                     LYQMTNRVVRNGSPLSDRFDNVARAARRAGYAPTLFGYTDQSADPTVLPPNDPWLRTY
                     EGVLPGFEVRVRLPEDEKPWLSWLRAQGLELGDHRRAHLPVRDAGKISSAPPAYGSEQ
                     TQTAFLAGEFTRWLGEQDRSWFAHLSFLRPHPPFIVPAPYNTMYDPDEVGPFRRAATP
                     ELEAAVHPLVAYALARTPVSSFVPGGTGLVADLDEAEFRQIKATYLGMISEVDAQLGR
                     VFDALRDSGQWNDTFIVFTSDHAEMLGDHFALGKGGFHDQSQHVPLVIRDPRAPLRGQ
                     RVEAVTEAVDIYPTLLEAMQVEPAHAPDGVSLQAWVDGRPPAGWRSAAHWDFAFRDVA
                     GQTTERAFGRRSNELNLAVARTPKWKYVHFSNLPPLLFDLEADPDNLHNLAGDVGHAM
                     VRAEMAEELLAWRARHLDQTLALQELTPAGVVAAPR"
BASE COUNT          249 a          604 c          549 g          264 t
ORIGIN      
        1 gaccagcaca cgccgccgcc ggcgcacaac gagcgggtgc aggtgacgct ggccggcagc
       61 gacatcctgg tgctcggaga ctgagctgaa ttttctcttc atcaccgccg accaatggcg
      121 cggcgagtgc ctgggggcgg caggccatgc gctgctgaag acgccgcaca tcgacgccct
      181 cgccgctgac ggcgcgatct tcctcagcca tttcgccaac gccgcgccgt gctcgccggc
      241 ccgcgcctgc ctctataccg gcctctacca gatgaccaac cgggtggtgc gcaacggctc
      301 gccgctgagc gaccgcttcg acaatgtcgc ccgcgccgcc cgtcgcgccg gctatgcccc
      361 gacgctgttc ggctacaccg accagtcggc cgacccgacc gtgctgccgc caaacgatcc
      421 gtggctgagg acctacgagg gcgtactgcc cggcttcgag gtgcgcgttc gcctgcccga
      481 ggatgagaag ccctggctga gctggctgcg cgcccagggg ctggagttgg gcgaccatcg
      541 acgcgcgcat ttgccggtgc gcgacgccgg caagatttcg agcgccccgc cggcctatgg
      601 ttcggagcag acgcagacgg cgttcctcgc cggtgagttc actcgctggc ttggcgaaca
      661 ggaccggagc tggtttgcgc atctgagctt cctgcggccg catccgccgt tcatcgtgcc
      721 ggcgccgtac aacacgatgt acgatccgga tgaggtcggg ccgtttcgac gggcggcgac
      781 gccggagctc gaggccgccg tccatccgct cgtcgcctat gcgctcgccc gcaccccggt
      841 gtcgagcttc gtgccgggcg ggacaggcct cgtcgccgac ctcgacgagg ccgagttccg
      901 ccagatcaag gcgacgtatc tcggcatgat cagcgaagtc gatgcccagc tcggtcgcgt
      961 cttcgacgcg ctgcgcgaca gcggccagtg gaacgatact ttcattgtct tcacctcgga
     1021 tcacgccgag atgctgggcg atcatttcgc gctgggcaag ggcggcttcc acgaccagag
     1081 ccagcacgtt ccgctggtga tccgcgaccc gcgcgcaccg ctgcgcgggc agcgcgtcga
     1141 ggcggtcacc gaggccgtcg acatctaccc gacgctgctc gaggcgatgc aggtcgaacc
     1201 ggcgcacgcg cccgacgggg tctcgctgca ggcctgggtg gatggcaggc caccggccgg
     1261 gtggcgcagc gccgcgcact gggacttcgc cttccgcgac gtcgcggggc agaccaccga
     1321 gcgcgccttc ggccgccgtt ctaacgagct caaccttgcc gtcgcgcgca cgccgaagtg
     1381 gaaatacgtc cacttttcca acttgccgcc gctgctgttc gacctcgaag ccgatccgga
     1441 caatctgcac aacctcgccg gcgatgtggg tcacgccatg gtccgggcgg agatggccga
     1501 ggagctgctg gcctggcgcg cccgccacct cgaccagaca ctggcactgc aggaactgac
     1561 gccggccggc gtcgtcgccg caccccgatg accgccgctt gacgcggccc tcgccttgcg
     1621 ggagtgcttg ccgatggaca accctttcgt caccaccgac tggctc
//
LOCUS       DATAZA010000011         7609 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2437623, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000011 DATAZA010000000
VERSION     DATAZA010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 7609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7609
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2437623"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(213..1523)
                     /locus_tag="VHZ56_00210"
     CDS             complement(213..1523)
                     /locus_tag="VHZ56_00210"
                     /inference="COORDINATES: protein motif:HMM:NF017077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE3 domain-containing protein"
                     /protein_id="HEX4296421.1"
                     /translation="MPQRPTAFVVGAVAIILALLVVSAIAQLQASDTASRMARSLATS
                     DTAERLLGVVRDAETGQRGYLLTGQDSYLGPFTAAQGSAGSIYDRLTQLVAGRSDQAD
                     RVAALKVPIDSKMAELAQTVQMATNGDRDGALKIVADGAGKTSMDDFRARIAEIETVE
                     VSTRGRLSDAEALRRSIDITAFVLAVIGLILLGWWLLRSGQIRALQLEDLNATLEQRV
                     AERTAALQKEQSRVELLLHDMNHRVGNNLSVVAAILALQRRKSSNPEVQLALERAQER
                     IAAIGASQRRLRLNLDTDDVEAPQFFGAVVEDLRRGVDGRPVTIETAIDEVRLPGRDA
                     VTYGVLVNELVTNSIKHAFPDGTSGTITLAVRSGGDGTIVVEVADDGVGMAAEEGQGL
                     GTTIFSNLARSLGAEVKAGPAAPGTARPGLRTTFVATPVSRGAE"
     gene            complement(1633..2709)
                     /gene="flhB"
                     /locus_tag="VHZ56_00215"
     CDS             complement(1633..2709)
                     /gene="flhB"
                     /locus_tag="VHZ56_00215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008547674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhB"
                     /protein_id="HEX4296422.1"
                     /translation="MSDDAEQSSKTETPSQKRLDDAHKRGDVVKSQEVNNWFMIAGSA
                     LLFSLMAGPTANNLGLSLKTLLANADQFEIGGPALTIFFTQLAQTILLVATIPLLVLA
                     ACGVAANLLQHRPLLSFGPLTPKFSKISPLEGAKRMFSRDALVNFVKGLIKLALVGGA
                     TFAVLWPQRDRLETMVTLDPAMLLPTFQDLGLKVFGAVLAVVTIIALVDYVYQRNRWW
                     NRLKMTVQEVRDEYKQMEGDPTIKGRIRSIRNERSRRRMMANVKKATVVITNPTHFAV
                     ALRYEKTMAAPVCVAKGSDDVALRIREEAKRHDVAIVENPPLARALFAAVDIDETIPT
                     EHFKAVAQVIGFVMRIKDKRAWRA"
     gene            complement(2706..3476)
                     /gene="fliR"
                     /locus_tag="VHZ56_00220"
     CDS             complement(2706..3476)
                     /gene="fliR"
                     /locus_tag="VHZ56_00220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliR"
                     /protein_id="HEX4296423.1"
                     /translation="MISLNWLPATAYFYILIFARVGSILMLIPALGEVTIPARMRLGF
                     ALVFSLVLYPLVQPELPDPPDDVLQVLVYLLHELAIGLILGAITRFITTEASVAGSVI
                     AFQTGLSGAQGPDPINGGPQGALIGAFLSMLGVTLIFATDLHHVALMAIRDSYMVFSP
                     KQPLMFGDAAQMAVQSAASAFVIGIQMSAPFIVLGLVFYLGMGLLARMMPQLQVFFVI
                     MPATIWVGLILVALLLSMMMGWYLTHFEAELAQLRGVR"
     gene            complement(3473..3739)
                     /gene="fliQ"
                     /locus_tag="VHZ56_00225"
     CDS             complement(3473..3739)
                     /gene="fliQ"
                     /locus_tag="VHZ56_00225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HEX4296424.1"
                     /translation="MDGTQVLDIARDGIWVMILVASPMMVVGLVVGIVIALVQALTQI
                     QEQTLVFVPKIIAIFVVMLIALPFMGATMSGYMTRLADLIVTGG"
     gene            complement(3749..4072)
                     /gene="fliE"
                     /locus_tag="VHZ56_00230"
     CDS             complement(3749..4072)
                     /gene="fliE"
                     /locus_tag="VHZ56_00230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HEX4296425.1"
                     /translation="MSTPFNAVAAAYNNASRLIQDAGKASSGTSATGGQGSDFGKLLA
                     DQVQGVMNAGKQSDQMSLDLLNGKANVVDVATAVSQTELAMESMVAVRDKVISAYEEI
                     MRMPI"
     gene            complement(4090..4503)
                     /gene="flgC"
                     /locus_tag="VHZ56_00235"
     CDS             complement(4090..4503)
                     /gene="flgC"
                     /locus_tag="VHZ56_00235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HEX4296426.1"
                     /translation="MSDFLSSLKIAATGLHAQDARMRVIAENLANADSTGKTPGADPY
                     RRRIPTFQAVMDDDAGGEVVQVGPVAEDMSDFETKYDPGNPGADKSGYVKYPNVDPLI
                     EATDMREAQRTYEANLNVVTVTRQMLGQTIDLLKS"
     gene            complement(4516..4914)
                     /gene="flgB"
                     /locus_tag="VHZ56_00240"
     CDS             complement(4516..4914)
                     /gene="flgB"
                     /locus_tag="VHZ56_00240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006932654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HEX4296427.1"
                     /translation="MAGLGTSLLQAMTEKMKWHQERQQVLAQNIANADTPGYQARDLA
                     DFSFGDEMKSLATVTVATTSPMHIEAASDDGGFASSDSPAFEVTPSGNGVTLEDQMMK
                     VTSNDMDYQTVTALYTRSLRLIRTALGEPS"
     gene            5092..5772
                     /locus_tag="VHZ56_00245"
     CDS             5092..5772
                     /locus_tag="VHZ56_00245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296428.1"
                     /translation="MQFMAALLGGTDNTLLNSAFALGIVLVLIVLGLWGLKVLTRAGG
                     NVARGRNRRLSVVDTANVDGKRQVVIIRRDNVEHVIMTGGPQDLVIETGIAVVEPAPA
                     PQRRAARPRQPAPAASPPPPPQRPTEIAVPIVPEGAVPREAVDRLRDLARPAPLRPRD
                     PLRDSALLRPVPRGGSDIIPMGPELRVDNSAGHADDSAKTAPNGNGQARLGERGRFFR
                     SVIRREPL"
     gene            5792..6517
                     /gene="fliP"
                     /locus_tag="VHZ56_00250"
     CDS             5792..6517
                     /gene="fliP"
                     /locus_tag="VHZ56_00250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715166.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HEX4296429.1"
                     /translation="MLLFGLVAAAVLIPTAVLAQDISVNFGDNTTLTQRAVQLVGLIT
                     VLALAPSILVMVTSFTRIVVVLSLLRTAIGLQTAPPNSVMISLALFLTFFIMQPTLQA
                     SYDQGVAPLLAGQIQIQEAFDKGSAPLHDFMAANVRQQDVQLFYDMSSEPPPADAKAI
                     PLKILVPAFMISELRRAFEIGFLLFLPFVIIDMVVASVLMSMGMMMLPPVVISLPFKL
                     IFFVLVDGWHLVAGSLIRSFVSG"
     gene            complement(6524..>7609)
                     /locus_tag="VHZ56_00255"
     CDS             complement(6524..>7609)
                     /locus_tag="VHZ56_00255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296430.1"
                     /translation="RAEAVYRTLLILRQTGKIDLTKATETLAAEAMLWRGNPLEVNMD
                     KLLAELYFAHKDYRLGFETAKDAAEHSPESKPIADLMDEAEQQFTDLYLNGAADQLPD
                     LDALSLYYDFRQLTPAGSKGDEMIRNLARRLVKVDLLSQAADLLQYQIDNRLTGVARA
                     EVATDLALIRIADRDPEAALRALNLTQMANLSPTLDRQRRILEARALIDADREDLALD
                     LLQDVQGRDADLLKVDGYWKAKNYEAASGIVENIYSADPAAVLSDGDRMNIVKAAVGL
                     VLSNDDLGLNRLRSKFADRLAQSAEWPMFDYITSPSVSPVGMEFKAAAKAVSGLDSVT
                     AFIQAYRTLYAADDGLAPAQADAKSAV"
BASE COUNT         1196 a         2698 c         2387 g         1328 t
ORIGIN      
        1 acgatgaacg ccgccgccag cgccacgacg cgccagagtc ccccgacgga acggggacgc
       61 gacaccagcg ggctcggata actgtcctcg tcagccggca tgctggacat ccaattcgcc
      121 ccttcgcgct cgaatcacgc gcccctccaa gctctagcaa aagctcgact cggccggtag
      181 cgcacaaccg caacggcgat cgcccgtcgg gactattccg cgcccctcga aaccggcgtc
      241 gcgacgaacg tcgtgcgcaa tcccggcctc gccgtgccgg gcgcggccgg ccctgccttg
      301 acctccgcgc cgagcgatcg ggcgaggttg gagaaaatcg tggtcccgag cccctgcccc
      361 tcctcggccg ccatgccgac gccatcgtcc gcgacctcca ccacgatcgt cccgtcgccg
      421 ccggagcgga cggcgagcgt gatcgtgccg ctcgtcccgt cggggaacgc gtgcttgatg
      481 gaattggtca ccagttcgtt gaccagcacg ccgtaggtga ccgcatcgcg tcccggcagg
      541 cgcacctcgt cgatcgccgt ctcgatcgtc accggcctgc cgtccacgcc gcgacgcaga
      601 tcctcgacca cggcgccgaa gaactgcggg gcctcgacgt catcggtatc gaggttgagc
      661 cggaggcgcc gctggctggc gccgatcgca gcaatccgct cctgcgcgcg ttccagcgcc
      721 agctgcacct cgggattgga gctcttgcgc cgctgcagcg ccaggatcgc cgccaccacg
      781 ctcagattgt tgcccacccg gtggttcatg tcgtgcagca gcagctcgac ccggctctgc
      841 tccttctgca gcgccgccgt gcgctcggcc acccgctgct cgagcgtcgc attgaggtcc
      901 tcgagctgca gcgcgcggat ctggccggat cgcagcagcc accagccgag caggatcagt
      961 ccgataaccg caagcacgaa ggccgtgatg tcgatgctgc gtcgcagcgc ctcggcatcc
     1021 gacagccggc cccgggtcga cacctcgacg gtctcgatct cggcgatacg tgcccggaaa
     1081 tcgtccatcg aggttttgcc ggccccgtcc gccacgatct tgagcgcccc gtcgcggtcg
     1141 ccgttcgtgg ccatctgtac ggtctgcgcc agctcggcca tcttgctgtc gatcggaacc
     1201 ttgagtgccg cgacccgatc tgcctgatcg ctccggcccg cgactagctg cgtcagccgg
     1261 tcgtagatcg agccagccga cccttgcgct gccgtgaacg ggccgaggta gctgtcctgg
     1321 ccggtgagca gatagccgcg ctgccctgtc tcggcatcgc gcacgacgcc cagcagccgc
     1381 tcggccgtat cgctggtcgc cagcgaccgc gccatccggc tggcggtgtc gctcgcctgc
     1441 agctgcgcaa tcgccgaaac caccagcagg gccaggatga tggcgacggc gcccacgaca
     1501 aacgccgtcg gacgttgggg catccagcga cttcgcgata gatcgcgctt catgacgtac
     1561 tcttcggccc ctgccgtacc ccgcccgagc gcgccgatgt tgtcgactaa ttatgacatg
     1621 cgcgcggcaa tcttacgcgc gccaggccct cttgtcttta atccgcatga cgaagccgat
     1681 gacctgcgcg acggccttga aatgctcggt cggaatcgtc tcgtcgatgt cgaccgccgc
     1741 aaacagcgcg cgggccagcg gtgggttctc gacgatcgcc acgtcgtgcc gcttggcctc
     1801 ctcgcggatg cggagcgcca cgtcgtcgga ccccttggcc acgcagaccg gcgctgccat
     1861 cgtcttttcg tagcgcagcg ccacggcaaa gtgcgtcgga ttggtgatca ccaccgtcgc
     1921 cttcttgacg ttcgccatca tccggcggcg gctgcgctcg ttgcggatgg agcggatgcg
     1981 ccccttgatc gtcggatcgc cctccatctg cttgtactcg tcgcgaacct cctgcaccgt
     2041 cattttcagc cggttccacc agcggttgcg ctggtacaca tagtccacca gcgcgatgat
     2101 ggtgacgacc gccagcaccg ccccgaacac cttgagcccg agatcctgga acgtcggcag
     2161 cagcatcgcc gggtcgagcg tcaccatcgt ttccagccgg tcgcgctgcg gccacaggac
     2221 ggcgaaggtg gcgcccccga ccagcgcgag cttgatcagc cccttgacga agttgaccag
     2281 cgcgtcgcgc gagaacatgc gcttcgcccc ttcgagcggc gagatcttgc tgaatttcgg
     2341 cgtcagcggg ccgaacgata gcagcggccg gtgttgcagc aggttggccg cgacgccgca
     2401 cgccgcgagc accaacaggg ggatcgtcgc caccagcagg atcgtctgcg ccagctgcgt
     2461 aaagaaaatc gtcagcgccg gaccgccgat ctcgaactga tcggcgttgg ccagcagcgt
     2521 cttgaggctg agccccaggt tgttcgccgt cggccccgcc atcagcgaga acagcagcgc
     2581 cgagccggcg atcatgaacc agttgttgac ctcctggctc ttgaccacgt cgccgcgctt
     2641 gtgcgcgtcg tcgagccgct tctgcgacgg agtttcggtt ttcgacgact gttcggcgtc
     2701 gtcgctcaac ggacgccccg caactgcgcc agctcggcct cgaaatgcgt gaggtaccag
     2761 cccatcatca tgctgagcag cagcgccacc aggatcagcc caacccagat cgtcgccggc
     2821 atgatgacga agaacacctg cagttgcggc atcatccggg ccagcaggcc catgccgaga
     2881 tagaacacca ggccgaggac gatgaacggc gccgacatct ggatgccgat cacgaacgcc
     2941 gacgccgccg actgcaccgc catctgcgcc gcatcaccga acatcagcgg ctgcttcggc
     3001 gaaaacacca tgtagctgtc gcggatcgcc atcagcgcca cgtgatggag gtcggtcgca
     3061 aagatcagtg tcaccccgag catcgagagg aacgcgccga tcagcgcgcc ctgcggacca
     3121 ccattgatcg ggtccggccc ctgcgcgccg gagaggcccg tctggaacgc gatcaccgac
     3181 ccggcaaccg aagcctccgt ggtgatgaac cgggtgatcg ccccgaggat cagcccgatc
     3241 gccagctcgt gcagcagata gaccagcacc tgcagcacat cgtccggcgg atcgggaagc
     3301 tcgggctgca ccagcggata gagcaccagg ctgaacacca gcgcgaagcc gagccgcatc
     3361 cgcgccggga tcgtgacttc gcccagcgcc gggatcagca tcaggatgct gccgacccgc
     3421 gcgaagatga ggatgtagaa ataggctgtc gccggcagcc agttcagcga gatcatccgc
     3481 cggtcacgat caggtcggcg agccgggtca tgtagcccga catcgtcgca cccatgaacg
     3541 gcagggcgat cagcatcacc acgaagatcg cgatgatctt gggcacgaac accagggtct
     3601 gttcctggat ctgcgtcagc gcctggacca gcgcgatgac gataccgacg accagtccga
     3661 ccaccatcat cggcgacgcc acgaggatca tcacccagat gccgtcgcgg gcaatatcga
     3721 gaacctgtgt gccgtccatg gcgcgctcct agatcggcat ccgcatgatt tcctcgtacg
     3781 cggaaatcac cttgtcgcgc accgccacca tgctctccat cgccagctcg gtctgcgaca
     3841 ccgccgtcgc cacgtcgacg acgttggcct ttccattgag gagatcaagc gacatctggt
     3901 cgctctgctt gccggcgttc atcaccccct gcacctggtc ggcgagaagc ttgccgaaat
     3961 cagagccttg gccaccggtg gctgatgttc cgctcgaagc cttgccggcg tcctggatca
     4021 gccgcgacgc gttgttgtac gcggcggcaa ccgcgttgaa gggagtgctc atgctgtgat
     4081 tctagccctt cagctcttga ggaggtcgat ggtctggccc agcatctggc gcgtcacggt
     4141 gacgacgttg aggttggcct cgtaggtccg ctgcgcctcg cgcatgtctg tcgcttcgat
     4201 cagcgggtcg acgttcgggt atttgacgta gccgctcttg tcggcccccg gattgcccgg
     4261 atcgtacttg gtctcgaagt ccgacatgtc ctcggccacc ggaccgacct gcacgacctc
     4321 gccgccggcg tcgtcgtcca tcaccgcctg gaaggtcggg atgcgacggc ggtacggatc
     4381 ggcgcccggc gtcttgccgg tcgaatcggc gttggcgagg ttctcggcga tcacccgcat
     4441 ccgcgcgtcc tgcgcgtgga ggccagtggc cgcgatcttc agggacgaca ggaagtcgct
     4501 cattcagggg ctccgttagc tgggttcgcc gagcgccgtg cggatcagcc gcagcgagcg
     4561 ggtgtagagg gcggtcacgg tctggtagtc catgtcgttg gacgtcacct tcatcatctg
     4621 gtcctcgagc gtcacgccgt tgccgctcgg cgtcacctcg aacgccggcg aatcggaaga
     4681 cgcgaagccc ccgtcgtcgc tcgccgcctc gatgtgcatc gggctggtgg tggccaccgt
     4741 cacggtcgcc agcgacttca tctcgtcgcc gaacgagaag tcggcgaggt cgcgcgcctg
     4801 gtagccgggc gtatcggcat tggcgatgtt ctgggcgagc acctgctggc gctcctggtg
     4861 ccacttcatc ttttccgtca tcgcctgcag cagcgacgtt cccagcccgg ccatcttcag
     4921 actctgttca ccacggtagg caaatcttgc cgcccgatgg ttaagaggcg gttaatcgcg
     4981 acggaaccac gggacattgc ctcgcatttt gcataatctg tcggtacgac ccggcaaatt
     5041 ctgcacaggt cgcgccgtta tggggggcgg cagaccatgg agcgcggcgg catgcagttc
     5101 atggcggccc tgttgggcgg caccgacaat accctgctca attcggcctt cgcgctcggc
     5161 atcgtcctgg tgctgatcgt gctcgggctg tggggcctca aggttctcac cagggccggc
     5221 ggcaacgtcg ctcgcggccg caaccggcgg ctgagcgtgg tcgacaccgc caacgtcgac
     5281 ggcaagcgcc aggtcgtcat catccgccgg gacaatgtcg agcacgtcat catgaccggc
     5341 ggcccgcagg acctcgtcat cgaaaccggc attgccgtgg tcgaaccggc ccccgcgccg
     5401 cagcgccgcg ccgctcggcc gcgccagccg gctcccgccg ccagcccgcc gcctccgccg
     5461 cagcgcccaa ccgagatcgc cgtaccgatc gtgcccgagg gcgccgtccc gcgcgaggcc
     5521 gtcgatcggc tgcgcgatct cgcccggccg gcaccgctgc gcccgcgcga tccgctgcgt
     5581 gactcggcgc tgctgcgccc ggtgccgcgc ggcggctccg acattatccc catgggaccg
     5641 gagctgcgcg tcgataattc cgccgggcac gcggacgact cagctaaaac cgcgccgaac
     5701 ggcaacgggc aggcacggct tggcgagcgc ggcagattct tcaggagcgt catccggcgc
     5761 gagccgctct gaccgtccgc gcgttccgcg cctgctgctg ttcgggctgg tcgccgccgc
     5821 ggtcctgatc ccgaccgccg tcctcgccca ggacatctcc gtcaatttcg gcgacaacac
     5881 cacgctgacc cagcgcgcgg tccagctcgt cgggctgatc accgtcctcg cgctcgcccc
     5941 ctcgatcctc gtcatggtga cgagcttcac ccgcatcgtc gtggtgctgt cgctgctgcg
     6001 caccgccatc ggcctgcaga ccgcgccgcc caattcggtg atgatctcgc tggcgctgtt
     6061 cctcaccttc ttcatcatgc agccgacgct gcaggcgtcc tacgaccagg gtgtcgcgcc
     6121 gttgctcgcc ggccagatcc agatccagga agcgttcgac aagggctccg cgccgctcca
     6181 cgatttcatg gccgccaacg tccgccagca ggacgtgcag ctgttctacg acatgagcag
     6241 cgagccgccg ccggccgacg ccaaggcgat cccgctcaag atcctcgtgc cggccttcat
     6301 gatctccgag cttcgccgcg ccttcgagat cggcttcctg ctgttcctgc cgttcgtcat
     6361 catcgacatg gtcgtcgcct cggtgctcat gtcgatgggc atgatgatgc tgccgccggt
     6421 ggtgatctcg ctgccgttca agctgatctt cttcgtgctg gtcgacggct ggcacctcgt
     6481 cgccggctcg ctgatccgca gcttcgtcag cggctagccg gcgtcacacc gcgcttttcg
     6541 catccgcctg cgccggcgcc agcccgtcgt cggccgcata gagcgtgcgg taggcctgga
     6601 tgaacgccgt caccgaatcg aggccggaca ccgccttggc cgcggccttg aattccatcc
     6661 ccaccggcga cacgctcggg ctggtgatgt agtcgaacat cggccattcc gccgactgcg
     6721 ccagccggtc ggcgaacttg ctgcgcaacc ggttgagacc caggtcgtcg ttgctgagca
     6781 ccagcccgac tgcggccttg acgatgttca tgcggtcgcc gtccgacagc accgcggcag
     6841 gatcggccga atagatgttc tcgacgatgc ccgacgccgc ctcgtagttc ttggctttcc
     6901 agtagccgtc gaccttgagc aggtccgcgt cgcggccctg cacgtcctgc agcaaatcca
     6961 gcgccaggtc ctcgcggtcg gcatcgatca gggcccgcgc ctcgaggatg cggcgctgcc
     7021 ggtcgagcgt cggcgacaaa ttggccatct gcgtcaggtt gagggcgcgc aacgccgcct
     7081 ccgggtcgcg atcggcgatc cggatcagcg ccaggtcggt cgccacttcc gcccgcgcta
     7141 ccccggtcag ccggttgtcg atctggtact gcagcaggtc cgccgcctgg ctgaggaggt
     7201 cgaccttcac cagccgccgc gccaggttgc ggatcatctc gtcacccttc gacccggccg
     7261 gggtgagctg gcggaaatcg tagtagaggc tcagcgcgtc gaggtccggc agctggtcgg
     7321 ccgcgccgtt gaggtagagg tcggtgaact gctgctcggc ctcgtccatc aggtcggcga
     7381 tcggcttgct ctcgggactg tgctcggccg cgtccttggc ggtctcgaag ccgagccggt
     7441 agtccttgtg cgcgaagtag agctcggcca gcagcttgtc catgttgacc tcgagcgggt
     7501 tgccgcgcca gagcatggct tccgccgcga gcgtctcggt cgccttcgtc aggtcgatct
     7561 ttcccgtctg cctgaggatc agcagcgtgc ggtacaccgc ctcggcccg
//
LOCUS       DATAZA010000012         4645 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1045090, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000012 DATAZA010000000
VERSION     DATAZA010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4645
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1045090"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..247
                     /locus_tag="VHZ56_00260"
     CDS             <1..247
                     /locus_tag="VHZ56_00260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296431.1"
                     /translation="DDALFANAGNDGDLFATVDGIAGQILMKNSNNVTVTVDNNPVTT
                     PAYVDASGSLTGTNVPIEVVRSFATIIGLLPSTFFGA"
     gene            373..606
                     /locus_tag="VHZ56_00265"
     CDS             373..606
                     /locus_tag="VHZ56_00265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296432.1"
                     /translation="MRLVRALASAALLTLAAPAAAMAGTHPVVVQFLTMTGTMTNGGN
                     SHVCKNATSGNIWYCQDGWACDIKLEECVKKKS"
     gene            874..2022
                     /locus_tag="VHZ56_00270"
     CDS             874..2022
                     /locus_tag="VHZ56_00270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020810614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX4296433.1"
                     /translation="MKRRSFMISAGAVAGMAMLPKSAFADPNRIDWITSSDQNIIDFW
                     TNVVKPKFEAANPGITINLVDGGDNAGLVSLASRALAALQTKTDPQVDFFEGFDSRLP
                     NGGIAAGLWVDLSKAGLSNYSKINPLALDIPTNFPYRGSQVLLAYDSTKLSKDKAPKT
                     WPDLVAWIKANPGQFIYNRPDKGGSGLNFVIRAVYEANGKDPSLFKVDNFDAAKAEPM
                     FAKGWDILKDLAPSLMDQGAYTSGNTQSIQLLSQGAVTAIPAWSDQSLSALTQGVLPD
                     TTGLVQLSDLGFPGGFTWCTVPSNGANHDATLKMCDFLLTEDIQSAILTQLGGFPGVS
                     WDYVSADLREKFKDLVPKSIPVFPGGDWQKALQDSWYRNVAPNINRSA"
     gene            2100..2900
                     /locus_tag="VHZ56_00275"
     CDS             2100..2900
                     /locus_tag="VHZ56_00275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018115320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX4296434.1"
                     /translation="MPVLLVVWLVIWPILSAIVSTFWVPTDAGYQLSVASYAFFFSDP
                     YSVNNLLLTLWTTAVVAVLLLVLCMPIALYLRFAGGRLSAYVQGLAIFPMFVPSIILS
                     YAFIRVLGPNGMLDILLNATHLPKIRTPYLTPWGPVIGLVWDNIPLTVLILLSGLGNV
                     PNPSIEAARDVGAGRLAVMWYIILPRITTTLLVALSFTVLSIFSSFTLPYVLGPAAPE
                     MLGPFMQRTFRDMNDPLDAITQAVIAFAICLLFGLFYVRSVARNRPGR"
     gene            2903..3730
                     /locus_tag="VHZ56_00280"
     CDS             2903..3730
                     /locus_tag="VHZ56_00280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006726468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX4296435.1"
                     /translation="MAGAVARLRSRPDIVGLVFAVVLTIVIIFPLVVVCTWAFADVWR
                     FPNIIPQQFGLRYWHDTLARTDVWDALSVSVRLAITVTFVSTLICVPAAYAFARLEFP
                     FRNILFFSFLAGQAFPKFGLLVAIAAIFLRLNLIGTFWGVALIQLVGTLLFMIWIPVA
                     AFQSVDRRMEEAARDVGASPLRVFWSITLPQAGPTIAAAVLLSFVSTFYETEGAWLIG
                     APRISTTPVLMISFINNQPVIQYGAVLSMILWIPSFVALIFARRVIGSGAFARGFGG"
     gene            3733..>4645
                     /locus_tag="VHZ56_00285"
     CDS             3733..>4645
                     /locus_tag="VHZ56_00285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020810611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4296436.1"
                     /translation="MAVLDIKGVSKQFGGAVRAVDHFNLEVGDGELVCLLGPSGSGKS
                     TLLRMIGGFERPTAGSITIDGEEVIHLPPERRPTGMVFQSHALWTHMNVYKNLAFGLK
                     LRHRPADEIKRRVEAVLELVGLAGYGARMTNQLSGGQQQRVALARSLVLEPKILLLDE
                     PFASLDQHLRERLREEVRDIQQRLKITTLFVTHGQDEALSMADRIVVMRDGKVEQVAA
                     PDMLYREPATPFVAGFIGTMNLIEGTASGGRFARGGFSNPLPVADGPATLAVRPEALG
                     IAPAATGMAKIHRVTDYGAHAIIDVELP"
BASE COUNT          720 a         1563 c         1522 g          840 t
ORIGIN      
        1 cgacgacgcg ctgttcgcca atgccggcaa tgacggcgac ctgttcgcca cagtcgacgg
       61 cattgccggc cagatcctga tgaagaactc caacaacgtc accgtcacgg tcgacaacaa
      121 tccggtcacc acgccggcct atgtcgatgc ctcgggctcg ctcaccggga ccaacgtgcc
      181 gatcgaggtc gtgcgctcgt tcgcgaccat catcgggctg ctgccgtcga ccttcttcgg
      241 cgcctgatcc atcgcaggga ctggcgggga acgcgcgcgg cgctccccgc ttcggccggc
      301 cgattgcccg gcgcggcagc tccgtgccat cgtcgggcgt tggcgattcc agcgggggac
      361 gacgagatga gcatgcgact ggttcgggcg ctggcgagtg cggcgctgct gacgctggcg
      421 gcgccggccg cggcgatggc cggcacgcat ccggtggtgg tgcagttcct gacgatgacc
      481 ggcacgatga cgaacggcgg caacagccat gtctgcaaga acgccacgag cggcaacatc
      541 tggtactgcc aggacggctg ggcctgcgac atcaagctcg aggaatgcgt gaagaagaag
      601 tcctaggcgg gggtgacgtc ctgtccgcgc gcgcctgtcg gcgttcgcgg ccagcttcgg
      661 aagtccggcg tcctgaccgc tcggtttcac accgctgtca tgtcggtggc gtctaagcag
      721 aggcgtcggc ggaacgtgcc gacagccgaa cgtcacaatg gaattttccg tccaattttt
      781 tgcttgccga tggccaagcg agggatagtc ttggccgaag gtcgggcgag gatcgatcgc
      841 atccggagcc atccggcaga cagggagtaa acaatgaaac gccgcagctt tatgatctcg
      901 gccggtgccg tcgccggcat ggccatgttg ccgaaatctg ccttcgccga tcccaaccgg
      961 atcgactgga tcaccagctc cgaccagaac atcatcgact tctggaccaa tgtggtgaag
     1021 ccgaaattcg aggcggcgaa ccctggcatc accatcaacc tcgtcgatgg cggcgacaat
     1081 gccggcctcg tctcgctcgc cagccgcgcg ctggcggcgc tgcagaccaa gaccgacccg
     1141 caggtcgatt tcttcgaggg cttcgactcc cgcctgccca atggcggcat cgccgccggg
     1201 ctctgggtcg acctgtccaa ggccgggctg tccaactact ccaagatcaa cccgctggcg
     1261 ctcgatatcc cgaccaattt tccgtatcgc ggcagccagg tgctgctcgc ctatgacagc
     1321 accaagctca gcaaggacaa ggcgcccaag acctggccgg acctcgtcgc ctggatcaag
     1381 gccaaccccg gccagttcat ctacaaccgg ccggacaagg gcggctcggg cctcaacttc
     1441 gtcatccgcg ccgtctacga agcgaacggc aaggatccga gcctgttcaa ggtcgacaat
     1501 ttcgacgccg ccaaggccga gccgatgttc gccaagggct gggacatcct caaggacctg
     1561 gcgccgtcgc tgatggacca gggcgcctac acctcgggca acacgcagtc gatccagctg
     1621 ctgagccagg gcgcggtcac ggcgatcccg gcctggtcgg accagtcgct gtcggcgctc
     1681 acccagggcg tgctccccga tacgaccggg ctcgtgcagc tgagcgacct cggcttcccc
     1741 ggcggcttca cctggtgcac cgtgcccagc aacggcgcca accacgacgc gacgctcaag
     1801 atgtgcgatt tcctcctcac cgaggacatc cagtcggcga tcctcaccca gctcggcggc
     1861 ttcccgggcg tgtcgtggga ttacgtctcg gccgacctgc gcgagaagtt caaggacctg
     1921 gtgcccaagt cgatcccggt gttcccgggc ggtgactggc agaaggcgct gcaggacagc
     1981 tggtaccgga acgtcgcgcc caacatcaac cgcagcgcgt gaccactgac gccgcggcgc
     2041 cggcgctacc tgccacgagc gaaaagagcg ggaggcttct gggcctcctg ctcgtcgcca
     2101 tgccggtgct gctggtggtg tggctggtca tctggccgat cctgtcggcc atcgtcagca
     2161 cgttctgggt gccgacggat gcgggctacc agctgtcggt cgccagctac gccttctttt
     2221 tttccgatcc ctacagcgtc aacaacctgc tgctgacgct gtggaccacg gcggtggtgg
     2281 cggtgctgct gctggtgctg tgcatgccga tcgccctcta tctgcgcttt gccggcgggc
     2341 ggctgtcggc ctacgtgcag gggctcgcga tctttccgat gttcgtgccc tcgatcatcc
     2401 tgagctacgc cttcatccgc gtgctgggcc ccaacggcat gctcgacatc ctgctcaatg
     2461 ccacgcacct gccgaagatc aggacacctt atctcactcc ctggggaccg gtgatcgggc
     2521 tggtgtggga caatattcca ctcaccgtgc tgatcctgct gtcgggcctc ggcaacgtgc
     2581 ccaatccctc gatcgaggcg gcgcgcgacg tcggggccgg acggctggcc gtcatgtggt
     2641 acatcatcct gccgcgcatc accacgacgc tgctggtggc gctgagcttc accgtgctgt
     2701 cgatcttttc gtcgttcacg ctgccctacg tgctggggcc ggcggcgccc gagatgctgg
     2761 ggccgttcat gcagcgcacg ttccgcgaca tgaacgatcc gctcgatgcc atcacccagg
     2821 cggtgatcgc cttcgccatc tgcctgctgt tcggactgtt ctacgtccgc tcggtggcgc
     2881 gcaaccggcc ggggcgctga gcatggccgg cgccgtcgcc cgccttcggt cgcggcccga
     2941 catcgtcggg ctggtgttcg cggtggtcct caccatcgtc atcatcttcc cgctggtggt
     3001 ggtgtgcacc tgggcgttcg ccgacgtatg gcggttcccc aacatcatcc cgcagcagtt
     3061 cgggctgcgc tactggcacg acacgctggc gcgcaccgac gtatgggacg cgctgtcggt
     3121 gagcgtccgg ctggcgatca ccgtcacctt cgtatcgacg ctgatctgcg tgccggccgc
     3181 ctatgcgttt gcgcggctcg agttcccgtt ccgcaatatc ctgttcttct cgttcctcgc
     3241 cggccaggcg tttcccaagt tcggcctgct ggtcgccatc gcggcgatct tcctcaggct
     3301 gaacctgatc ggcacgttct ggggcgtggc cctgatccag ttggtgggta cgctgctgtt
     3361 catgatctgg attccggtgg cggcgttcca gtccgtcgac cggcgcatgg aggaggcggc
     3421 gcgcgacgtc ggcgcttcgc cgctcagggt gttctggtcg atcacgctgc cgcaggccgg
     3481 cccgacgatc gccgcggcgg tgctgctcag cttcgtgtcc accttctacg agaccgaggg
     3541 cgcctggctg atcggggcgc cgcggatcag caccacgccg gtgctgatga tttccttcat
     3601 caacaaccag ccggtgatcc agtatggggc ggtgctctcg atgatcctgt ggattccttc
     3661 cttcgtggcg ctgatctttg ccaggcgggt catcggttcg ggcgcctttg cgcgcggctt
     3721 cggcggctag cgatggcggt tctcgacatc aagggcgtca gcaagcagtt cggcggggcg
     3781 gtgcgcgccg tcgaccattt caacctcgag gtgggcgacg gcgaactggt ctgcctgctc
     3841 ggcccgtcgg gctcgggcaa gtcgacgctg ctgcggatga tcggcggctt cgagcggccg
     3901 accgccggca gcatcaccat cgacggcgag gaggtcatcc acctgccgcc ggagcgccgg
     3961 cccaccggaa tggtgttcca gagtcatgcg ctgtggaccc acatgaacgt ctacaagaac
     4021 ctggcattcg ggctgaagct ccggcaccgg ccggcggacg agatcaagcg ccgggtcgag
     4081 gcggtgctcg agctggtggg actcgccggc tatggcgcgc ggatgaccaa ccagctctcg
     4141 ggcggccagc agcagcgcgt ggcgctggcc cgctcgctgg tgctcgagcc caagatcctg
     4201 ctgctcgacg agccgttcgc ctcgctcgac cagcatttgc gcgagcggct gcgcgaagaa
     4261 gttcgcgaca tccagcagcg gctgaagatc accacgctgt tcgtgacgca cgggcaggac
     4321 gaggcgctga gcatggccga ccgcatcgtc gtcatgcgcg acggcaaggt cgagcaggtc
     4381 gcggcgcccg acatgctgta tcgcgagccg gcgacgccgt tcgtcgcagg gttcatcggc
     4441 accatgaacc tgatcgaggg gacagccagc ggcggccgct tcgcgcgcgg cggcttcagc
     4501 aatccgctgc cggtcgccga cgggccggcg acgctggcgg tgcggccgga ggcgctcggc
     4561 atcgcaccgg cggcgacggg catggccaag atccaccggg tgaccgacta tggcgcgcac
     4621 gccatcatcg atgtggagct gcccg
//
LOCUS       DATAZA010000013         8080 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_464839, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000013 DATAZA010000000
VERSION     DATAZA010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 8080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8080
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_464839"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..678)
                     /locus_tag="VHZ56_00290"
     CDS             complement(<1..678)
                     /locus_tag="VHZ56_00290"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX4296437.1"
                     /translation="MDEFEVAIAGGGPVGLALALELAQGGARVVGLEARPDRTDPALQ
                     GMLAPRSINRASGLSLGRLGVIEAIKARALWWFDPKLLAAKPVTGRPVIEGFIGHFSG
                     IGLKGRNLDPARLGDLGEGGGAVAMADIIAVLEEAAIAAGAVVRMGAGVSGYSEDADG
                     VTVDTVAGPVRAKWLVACDGGRSGLRKLAGIGFPGTDAEFVGRIGFVAFAEGAAPPVG
                     DWIDTPHG"
     gene            757..1476
                     /locus_tag="VHZ56_00295"
     CDS             757..1476
                     /locus_tag="VHZ56_00295"
                     /inference="COORDINATES: protein motif:HMM:NF014906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX4296438.1"
                     /translation="MAEKPVPSVIWMRPTRGSRGPEPSRDRDAIARTAIAIADHEGLA
                     AVSMRRVAAEIGTGTSSLYRYFSRKDDLLNLMVDGALAGDVLTASGHWRRDLEAMGHG
                     LRRLFKAHPWLATALAGRPTLGPNRLRALEGVLDLLKDTGLSLGERLVLVDTLGSYVR
                     GFVASEIADTTAIAESGLSSSQWQADQAAYAEAIAKSGHYPLATQLFEEFRATGTGGQ
                     DKSFAAGLEIVLDGLARRLGG"
     gene            complement(1473..1772)
                     /locus_tag="VHZ56_00300"
     CDS             complement(1473..1772)
                     /locus_tag="VHZ56_00300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="HEX4296439.1"
                     /translation="MPARVLPPVHPGEYLSEEYLAPLGLTPYALAVHLGVPRTRIERL
                     CRQQTGITPDTALRLARYFGTTPDFWMTLQALHDLTVAEQQSAKTIAAIKPMRAA"
     gene            complement(1777..2058)
                     /locus_tag="VHZ56_00305"
     CDS             complement(1777..2058)
                     /locus_tag="VHZ56_00305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEX4296440.1"
                     /translation="MIGSFKGRFAEAIAAGRAPKGFPADLVRPAQRRLAAMIAATELQ
                     SLASPPGNRLEALKGSRTGQHSIRINDQWRICFRWEAGRAEDVEIVDYH"
     gene            complement(2090..2464)
                     /locus_tag="VHZ56_00310"
     CDS             complement(2090..2464)
                     /locus_tag="VHZ56_00310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019861408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase superfamily protein"
                     /protein_id="HEX4296441.1"
                     /translation="MPLTHLGTVPILRSFDEAKAREFYIDWLGFTLDWQHRFEPWAPL
                     YMQVSRAGIVFHLSEHHGDGSPGAHVRVRITGVHEFHAELSARQYKNNRPGLERPEWG
                     GTEFTVIDPVNNRITFAEADEA"
     gene            2755..4569
                     /locus_tag="VHZ56_00315"
     CDS             2755..4569
                     /locus_tag="VHZ56_00315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011982463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4296442.1"
                     /translation="MARLKLDLRGDAYRKVLSFLFGHWAAQPGRAAGMFGLFMLATVA
                     DVLTPLFAGNLVTAVSTAPGPDSLDGALVAFAALIGLGLGSVILRQLGFIVLIRFTLA
                     MMGEIARNAFHRVQRFSTDWHANTFAGSTVRKATRGMWGVDMLNDTLIIMLFPSLVML
                     VGTSILLGIIWPVMGLVIAIGSLLYVATTVTLSVSYVSPAASLANAWDTRMGGALADA
                     ISCNSVVKGFGAEDREEERLGHVVDKWKTRTERTWKRGTLNGGVQGATLIALRTAIVA
                     VAILLWWQGRATAGNVALVLTSFFVLQGYLRDIGQHVRNLQRSVNDMEELVDVQLHPL
                     GIEDRPDAAGHLIEEGAIGFDHVTFQYGRHATPLYRDFSVTIPAGQRVGLVGQSGSGK
                     TTFVKLIQRLYDVTDGAIRIDGHDIRDFTQAALRSQIAIVAQEPILFHRSLAENIAYA
                     RPGATRQEIIGAARLASAHDFIDTLPKGYETMVGERGVKLSGGERQRVAIARAFLADS
                     PILILDEATSSLDSESEVLIQQAMERLMVGRTTIVIAHRLSTVRALDRLLVFDKGSIV
                     EEGTHEQLVRRDGGIYRRLFERQALELTRGLRPVPTDA"
     gene            complement(4566..6074)
                     /locus_tag="VHZ56_00320"
     CDS             complement(4566..6074)
                     /locus_tag="VHZ56_00320"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF012946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX4296443.1"
                     /translation="MRILVIGAGISGIAAAKTLMGFGHEVIVCEKETVIGGVWATAYP
                     GVTLQNIAEHYRLTDFPWPFKPQSHPTAEEVRRYLDAAVRHFKLDLRLAHDVSSLEEA
                     PEGWVATIRGPAGTTEERFDYVLVATGQYSGDKTQVDLPGHDSFTGTVLRDRQVTDLE
                     IFRNARVAVVGFGKTAVDLATFAVARGATVTHVFRNARWLLPYTMAGRDIAEIVTART
                     STFFLPSWVHPTAREAKFHARWSRHIGTYWKNTSAMLHMATGLRRPGRSAAARERLKL
                     VTPEGPVTIQLRGTMAPKPYYPAVAAGKITPVRGTLAGLAPEGVRLADGRVVPADIVV
                     LAIGNDKPSFSYLPSPYREMMTAEEDGVQLYRHILHPRIPRLAFIGYNHGVFHLPASE
                     LSAVWVEAVASGDLELPPVAEMEQRSARVAAWKRANTNFEPQRGFTTSNHFHQYFGAL
                     LGDIGVNPRRKKNAIAEIFAAYDAADYAGVAGEYLAGRAKRGAPLRALPLDT"
     gene            6165..7163
                     /locus_tag="VHZ56_00325"
     CDS             6165..7163
                     /locus_tag="VHZ56_00325"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX4296444.1"
                     /translation="MSLPLSILDLAPVPEGTSTETALQNIVSLARLGDELGFTRVWYA
                     EHHGMPSIASSSPEVLIATAAASTSRIHVGSGGVMLPNHVPLRVVETYRTLNGLHPGR
                     IDLGIGRAGGSDGRTLSALRSVDGNYFPQELAELLAFEEGTFPAGHPFGAIHVAPGNV
                     ALPPIFLLGSSGASAQAAGELGIGYSFAGHFSATPPAPAFEAYRAAFRPSPQFPRPHA
                     ILAVAALLAPTDEEARFLSGSQELSWALFHSGELRKLVSPEEAAAHHYSPQQQAVIDK
                     QAKLWIVGSPDSVRAEISRQAEAAGADEVMVTTTVWSHQLRLRSYRLLAEAFGLGR"
     gene            7218..>8080
                     /locus_tag="VHZ56_00330"
     CDS             7218..>8080
                     /locus_tag="VHZ56_00330"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEX4296445.1"
                     /translation="MPDDRAPSSSRYAALDGLRGLCALLVALFHLPIASHVYTSPLLR
                     DAYVFVDFFFVLSGFVIAHAYGARLGTNGAVGSFLVRRVGRLWPLHLAVLAVLVALEL
                     GKLAFVGHMTDDMRPPFSGDTGISSLLANIFLVHAWGFSNSGSWNVPSWSISAELFAY
                     LAFAAVCRFLPRRATLVATLIVVGGLLLLVFATNADTASHLLAIRAAVGFFLGTLVYR
                     VFSATGTPRWRPALATTLEALVAIAVLAYLALVELPDLSVVATPLFAVAIYVFAAGRG
                     ALSRLLGTRPM"
BASE COUNT         1159 a         2977 c         2629 g         1315 t
ORIGIN      
        1 cccgtgcggc gtgtcgatcc agtcgccgac cggcggtgcg gcgccctcgg cgaaggcgac
       61 gaagccgatg cgcccgacga attcggcgtc ggtgccggga aagccgatcc ccgccagctt
      121 gcgcagcccg ctgcggccgc cgtcgcaggc gaccagccat ttcgcgcgca ccggtccggc
      181 caccgtgtcg accgtcacgc cgtcggcatc ctcgctgtag ccgctgacgc ccgcgcccat
      241 gcggacgacg gcgccggccg cgatcgcggc ctcttccagc acggcaatga tgtcggccat
      301 cgccacggcg ccaccaccct cgccgagatc gccgagcctc gccggatcga gattcctgcc
      361 cttgaggccg atgccggaga aatggccgat gaagccttcg atcaccggcc tgccggtgac
      421 cggcttcgcc gccaacagtt ttggatcgaa ccaccacagc gcgcgcgcct tgatcgcctc
      481 gatcaccccg aggcgcccga gcgacagccc gctcgcccgg ttgatcgagc gcggcgccag
      541 catgccctgc agcgccggat cggttcggtc gggccgcgct tcgagcccca ccaccctggc
      601 gccgccctgc gccagctcca gcgccagggc cagcccgacc ggcccgccgc cggcaatcgc
      661 cacctcgaat tcgtccatcg caatacctcg atacagtgtt cgcagtagcg ggatatatag
      721 aactgtgtac actgttcgca ataggggaaa ttcaaattgg ccgaaaagcc ggtgccgtcg
      781 gtcatctgga tgcggccgac gcggggatcg cgcgggcccg agccgtcgcg cgaccgcgac
      841 gccatcgccc ggaccgccat cgccatcgcc gaccatgaag ggctggccgc ggtgtcgatg
      901 cgccgcgtcg ccgccgagat cggcaccggc acgagctcgc tctaccgcta tttttcccgc
      961 aaggacgacc tgctgaacct gatggtcgat ggcgccctgg ccggcgacgt gctgaccgcc
     1021 agcggccact ggcggcgcga cctcgaggcc atgggacacg gcctgcggcg gctgttcaag
     1081 gcgcacccct ggctggcgac ggcattggcg ggccgcccga ccctcgggcc caaccggctg
     1141 cgggcgctgg agggcgtgct cgacctgctg aaggacaccg gcctctcgct cggcgagcgg
     1201 ctggtgctgg tcgacaccct cggctcctac gtgcgcggct tcgtcgcctc cgagatcgcc
     1261 gacaccaccg ccatcgccga atccggcctg tcgtcgtccc agtggcaagc cgaccaggcg
     1321 gcctatgccg aggccattgc caaatccggg cactatccgc tggcgacgca actgttcgag
     1381 gagttccgcg ccaccggcac cggcggccag gacaagagct ttgccgccgg cctcgagatc
     1441 gtcctcgacg gcctcgcgcg ccggctgggc ggctaggccg cccgcatcgg tttgatggcg
     1501 gcgatcgtct tggccgactg ctgctcggcg acggtcaggt cgtgcagggc ctgcagagtc
     1561 atccagaagt ccggcgtggt cccaaaatac cgggcgagcc gcagcgccgt gtcgggagtg
     1621 atcccggtct gctgccggca gagcctttcg atccgcgtcc gcggcacccc cagatgcacc
     1681 gccagcgcat acggcgtcag cccgagcggc gcgaggtact cctcgctcag atactcgccc
     1741 ggatgcaccg gaggcagcac gcgcgccggc atcggcctag tgatagtcga caatttccac
     1801 atcctccgcg cgaccggctt cccacctgaa gcagatgcgc cattgatcgt tgatccggat
     1861 cgaatgctgt cccgtccggc tgcccttcag cgcctcgagt cgattccctg gcggcgacgc
     1921 aagcgactgc aattcggtcg ccgcaatcat cgccgccagc cgacgctgtg cgggccgaac
     1981 cagatcggcc ggaaagccct tcggtgcccg tccggcggca atcgcctcgg cgaacctgcc
     2041 cttgaacgat ccgatcacgc cgcgaggata cgtatcatat cgtgatacgt caagcctcgt
     2101 ccgcctcggc aaaggtgatg cggttgttga ccgggtcgat gacggtgaat tcggtgccgc
     2161 cccattcggg gcgttcgagg ccggggcggt tgttcttgta ctgcctggcg ctcagttcgg
     2221 cgtggaactc gtggacgccg gtgatgcgga cgcgcacatg cgccccgggc gagccgtcgc
     2281 cgtgatgctc ggacagatgg aacacgatgc cggcacggct gacctgcatg tagagcggcg
     2341 cccagggctc gaagcggtgc tgccagtcga gggtgaagcc gagccagtcg atgtagaact
     2401 cgcgcgcctt ggcctcgtcg aagctgcgca ggatcggcac ggtgccgaga tgggtgagcg
     2461 gcatgcagcg actatcgggc ggggcggcgg cgggcgcaac ccttgccgcc gggcccgggc
     2521 ttcgctatag ggcgatatcg gtattgcgag ccacaggagg cgcccagtga ctgttgatcc
     2581 gtcccgcctc gtgaggcgac ccccggcgcc ctgagccgcc cgccggcctg tgtgccggcc
     2641 tgatttcccg ccgccggctt cgattcccac ggacgctctt ctgtccggcg gcgctaccca
     2701 ccgaccatca tttttacctg ggaccggcac ggccattggc cgccggatga caccatggcc
     2761 cgtttgaaac tcgacctgcg cggcgacgcc tatcgcaagg tgctgtcctt cctgttcggc
     2821 cattgggcgg cacagcccgg ccgggccgca ggcatgttcg gcctgttcat gctggcgacc
     2881 gtcgccgacg tgctgacgcc gctgtttgcc ggcaacctcg tcaccgcggt gtcgaccgcg
     2941 cccggccccg acagcctcga cggcgccctc gtcgccttcg cggcgctgat cgggctcggg
     3001 ctcggctccg tcatcctgcg ccagctcggc ttcatcgtgc tgatccgctt caccctggcg
     3061 atgatgggcg agatcgcccg caacgccttc caccgggtgc agcgcttttc gaccgactgg
     3121 catgccaaca ccttcgccgg ttcgaccgtg cgcaaggcga cgcgcggcat gtggggcgtc
     3181 gacatgctca acgacaccct gatcatcatg ctgttcccct cgctggtgat gctggtcggc
     3241 acctcgatcc tgctcggcat catctggccg gtgatgggtc tcgtcatcgc cattggatcg
     3301 ctgctctacg tcgccaccac cgtcaccctg tcggtgagct acgtgtcgcc ggcggcgagc
     3361 ctcgccaacg cctgggacac ccgtatgggc ggcgcgctcg ccgacgccat ctcctgcaac
     3421 tcggtggtca agggctttgg cgccgaggac cgcgaggagg agcggctggg ccatgtcgtc
     3481 gacaagtgga agacccgcac cgagcgcacc tggaaacgcg gcaccctcaa cggcggggtg
     3541 cagggcgcga cgctgattgc gctgcgcacc gccatcgtcg ccgtcgccat cctgctgtgg
     3601 tggcagggcc gcgccacggc cggcaacgtg gcgctggtgc tcacctcgtt cttcgtgctg
     3661 cagggctatc tgcgcgacat cggccagcac gtgcgcaatc tgcagcgctc ggtcaacgac
     3721 atggaggagc tggtcgacgt gcagttgcat ccgctcggca tcgaggatcg ccccgacgcg
     3781 gcgggccacc tcatcgagga aggcgcgatc ggcttcgacc acgtgacctt ccagtacggc
     3841 cgccatgcga cgccgctcta ccgcgatttt tcggtgacca tcccggccgg ccagcgcgtc
     3901 gggctggtcg gccagtcggg ctcgggcaag accaccttcg tcaagctgat ccagcgcctc
     3961 tacgacgtca ccgacggcgc catccgcatc gacggccacg acatccgcga cttcacccag
     4021 gcggccttgc gcagccagat cgccatcgtc gcgcaggagc cgatcctgtt ccaccgttcg
     4081 ctcgccgaga acatcgccta tgcgcggccc ggcgcgacgc ggcaggagat catcggggcc
     4141 gccaggctcg ccagcgccca cgacttcatc gacaccctac ccaagggcta cgagacgatg
     4201 gtgggggagc gcggcgtcaa gctctcgggc ggcgagcgcc agcgcgtcgc catcgcccgg
     4261 gcgttcctcg ccgacagtcc gatcctcatc ctcgacgagg cgacgagctc gctcgactcc
     4321 gaatccgagg tgctgatcca gcaggcgatg gagcggctga tggtcgggcg caccaccatc
     4381 gtcatcgccc accggctgtc gaccgtccgc gccctcgacc ggctgctggt gttcgacaag
     4441 ggcagcatcg tcgaggaggg cacgcacgag caactggtgc ggcgcgacgg cggcatctac
     4501 cgccgcctgt tcgagcgcca ggcgctggag ctgacccgcg gcctgcggcc cgtgccgacc
     4561 gacgcctagg tgtcgagcgg cagcgcccgc agcggcgcgc cccgcttcgc tcgcccggcc
     4621 aggtactccc cggcgacgcc ggcatagtcg gcagcgtcat aggccgcaaa aatttctgcg
     4681 atggcgttct tcttgcgtcg cgggttgacg ccgatgtcgc ccagcagggc gccgaaatac
     4741 tggtggaaat ggttggaggt ggtgaagccg cgctgcggct cgaaattggt gttggcgcgc
     4801 ttccacgccg cgacccgcgc cgaccgctgc tccatctccg ccaccggcgg cagctcgagg
     4861 tcgccgctcg ccaccgcctc gacccacacc gcgctcagct ccgacgccgg caggtggaag
     4921 acgccgtgat tgtagccgat gaaggccagc cgcgggatcc gcgggtggag gatgtggcgg
     4981 tagagctgca ccccgtcttc ctcggccgtc atcatctcgc ggtacggcga cggcaggtag
     5041 gaaaagctcg gcttgtcgtt gccgatggcg agcacgacga tatcggccgg cacgacgcgc
     5101 ccgtcggcga gccgcacgcc ttccggcgcc agcccggcga gcgtgccgcg caccggcgtg
     5161 atcttgccgg ccgcgaccgc cggataatac ggcttcggcg ccatcgtgcc gcgcagctgg
     5221 atcgtcaccg gcccctcggg ggtgacgagc ttcagccgct cgcgcgccgc ggcgctgcgg
     5281 cccggccgac ggagcccggt cgccatatgc agcatggcgg atgtgttctt ccagtacgtg
     5341 ccgatgtgcc tggaccaccg ggcgtggaac ttcgcctcgc gcgccgtcgg atgcacccag
     5401 gacggcagga agaacgtgct ggtgcgcgcc gtcacgatct cggcgatgtc gcggccggcc
     5461 atggtgtagg gcagcagcca gcgcgcattg cggaagacgt gggtgaccgt ggcgccgcgc
     5521 gccaccgcga aggtcgccag gtccaccgcc gtcttgccga agccgaccac cgccacccgg
     5581 gcgttgcgga agatttcgag atcggtgacc tgccggtcgc gcagcaccgt gcccgtgaag
     5641 ctgtcatggc cgggcaggtc gacctgcgtc ttgtcgcccg aatactgccc ggttgccacc
     5701 agcacgtaat cgaaccgctc ctcggtcgtg ccggcggggc cgcggatcgt cgccacccag
     5761 ccctccgggg cctcctcgag gctcgacacg tcatgggcga gccgcaaatc gagcttgaag
     5821 tgccgcaccg ccgcatcgag atagcgccgc acctcctccg ccgtgggatg gctctgcggc
     5881 ttgaacggcc agggaaaatc ggtgagccgg taatgctcgg cgatgttctg cagcgtgacg
     5941 cccggatagg ccgtcgccca gaccccgccg atgaccgtct ccttctcgca gacgatcact
     6001 tcatggccga accccatcag ggtcttggcc gccgcaatgc cggaaatgcc ggcgccgatg
     6061 acgagaatcc gcatatgtct gtcttagacg agggcgcggc tgctccgcta tgaccggaac
     6121 gcctcatccc tcgcattgtg agtggaaagc gctaggatcg gccgatgagc ctgccgctgt
     6181 cgattctcga tctcgccccg gtgcccgagg gcacctccac cgaaaccgcc ctgcagaaca
     6241 tcgtcagcct tgcccggctc ggcgacgagc tgggatttac ccgcgtctgg tatgccgaac
     6301 accacggcat gccctcgatc gcctcgtcct cgcccgaggt gctgatcgcc accgccgccg
     6361 ccagcacctc ccgcatccat gtcggctcgg gcggcgtcat gctgcccaac catgtgccgc
     6421 tgcgggtggt cgagacctac cgcaccctca acggcctcca tcccggccgc atcgacctcg
     6481 gcatcggccg cgccggcggc agcgacggcc gcacgctgag cgccctgcgc tcggtcgacg
     6541 gcaattactt cccgcaggaa ctggccgagc tgctggcgtt cgaggaaggc accttccccg
     6601 ccggccaccc gttcggcgcc atccacgtcg cgcccggaaa cgtcgcgctg ccgccgatct
     6661 tcctgctcgg ctcctccggg gcgagcgccc aggcggccgg cgagctcggc atcggctatt
     6721 ccttcgccgg ccatttcagc gccaccccgc cggcgccggc cttcgaggcc tatcgcgccg
     6781 cgttccgtcc gagcccgcag tttccccggc cgcatgccat cctggcggtg gcggcgctgc
     6841 tcgccccgac cgacgaggaa gcccgcttcc tctccggctc gcaggagctg agctgggcgc
     6901 tgttccattc cggcgaattg cgcaagctgg tgtcgccgga agaggcagcg gcgcatcact
     6961 acagcccgca gcagcaggcg gtcatcgaca agcaggcaaa actctggatc gtcggctcgc
     7021 ccgacagcgt cagggccgag atttcccggc aggccgaggc cgccggggcc gacgaagtga
     7081 tggtgaccac caccgtatgg agccaccaat tgcgcctccg ctcctaccgg ctgctggcgg
     7141 aagccttcgg gctcggccgg taaccattcg ccgaggcccc gccgcggccg gcgcagcggc
     7201 cgtgctagtc ggggagaatg cccgacgatc gcgccccctc gtccagccgc tatgccgccc
     7261 tcgacggcct gcgtggactt tgtgccctgc tggtggcgct gttccacctg cccatcgcct
     7321 cgcacgtcta caccagcccg ctgctgcgcg acgcctacgt cttcgtcgat ttcttcttcg
     7381 tgctctcggg cttcgtcatc gcccacgcct atggcgcgcg gctcggcacc aatggcgcgg
     7441 tcggcagctt cctcgtccgc cgcgtcggcc ggctgtggcc gctgcatctg gcggtgctcg
     7501 ccgtgctcgt cgcgctggaa ctgggcaagc tcgccttcgt cggccacatg accgacgaca
     7561 tgcggccgcc gttttcgggc gacaccggca tctcgtcgct gctcgccaac atcttcctcg
     7621 tccacgcctg ggggttttcc aactccggca gctggaacgt gccgagctgg agcatcagcg
     7681 ccgagctgtt cgcctatctc gccttcgccg cggtctgccg cttcctgccg cgccgggcga
     7741 cgctggtcgc gacactcatc gtcgtcggcg gcctgctgct gctcgtgttc gccaccaatg
     7801 cggacaccgc cagccacctg ctcgccatcc gcgccgccgt cggcttcttt cttggaacgc
     7861 tggtctatcg ggtgttctcc gccaccggca ctccacgctg gcgcccggcg ctcgccacca
     7921 ccctcgaggc gctcgtcgcg atcgccgtgc tggcctacct ggcgctggtc gagctgcccg
     7981 acctgagcgt cgtcgcaacc ccgctctttg ccgtcgccat ctatgtcttc gccgccggcc
     8041 gcggcgcgct gtcgcgcctg ctcggcacgc ggccgatgca
//
LOCUS       DATAZA010000014         3838 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1509333, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000014 DATAZA010000000
VERSION     DATAZA010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3838
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1509333"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..852
                     /gene="proB"
                     /locus_tag="VHZ56_00335"
     CDS             <1..852
                     /gene="proB"
                     /locus_tag="VHZ56_00335"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013636975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEX4296446.1"
                     /translation="GRHGIVTGQILITPNITEERRYFLNARTTITTLLNLGAVPIINE
                     NDSVATAEIRYGDNDRLSARVATMVEADCLVLLSDIDGLYTAPPARDPAANHIPYVPQ
                     ITAEIEAMAGGAASHLSRGGMTTKIEAGKIATQAGTAMIIARGTDLHPLRALENGGTH
                     TLFAAAESRAQARKRWIMGTLAPAGEVHVDAGAARALLDGKSLLPIGVTGVTGEFVRG
                     DAVAILDPTGREIARGLVALGRDEAELVKGKNSRRVAEILGLGGRSELVHRDNMVVLA
                     GLETRTA"
     gene            849..2123
                     /locus_tag="VHZ56_00340"
     CDS             849..2123
                     /locus_tag="VHZ56_00340"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEX4296447.1"
                     /translation="MNAIDPDIPALMSAIGRRARAAAGILAFASTEAKNLALTAAADA
                     ILAERAAILAANAEDAGRAKEHGISTAFLDRLTVTEARLDGVARGLREIAALPDPVGT
                     VTAEWRRPNGLDISRVRTPLGVIGVIFESRPNVTADAGALTLKSGNAVILRGGSEATR
                     TSRAIHACLLAGLEAAGLPVDAIQLVPTSDRVAVGEMLAGLGGNIDVIVPRGGKTLVA
                     RVEAEARVPVFAHLEGLCHTFIDASADLQMAVDVTVNAKMRRTGVCGATETLLMHKGV
                     LATHLRPILDALVARGCEIRGDATVQRLYPAARPATEADWHTEYEDAIISVKAVDDVG
                     EAIAHITQYGSHHTEAIISEDPVSVGRFFTEIDSAILLHNASTQFADGGEFGFGGEIG
                     IATGKFHARGPVGLEQLCSFKYLVRGNGQLRP"
     gene            2123..2731
                     /locus_tag="VHZ56_00345"
     CDS             2123..2731
                     /locus_tag="VHZ56_00345"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HEX4296448.1"
                     /translation="MPASGLPPAAPGERIGLFGGSFNPAHEGHRLVALECLKRLALDR
                     VWILVSPGNPLKDHAELAPLPDRMAQTVKLMDDPRLAVTGFEAAEGFTYTWQTLDFLH
                     RALPDVRLVWIMGTDSLQTFDHWERWEDVARTMPMAIYARPGSAFTATSGRAATALAA
                     YRLPEAEASSLADRTPPAWVYLHGVMSPLSSTAIREAQKSPQ"
     gene            2960..3286
                     /gene="rsfS"
                     /locus_tag="VHZ56_00350"
     CDS             2960..3286
                     /gene="rsfS"
                     /locus_tag="VHZ56_00350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEX4296449.1"
                     /translation="MIDVVLQSLDDAKAEEVVAIDISGKSSLADFMVVGSGRSNRHVS
                     AVADQVMKALREHGFDKPRVEGLPHADWVLVDGGDVIVHIFRPEVREFYSLEKMWQAD
                     FAADAS"
     gene            3293..3775
                     /gene="rlmH"
                     /locus_tag="VHZ56_00355"
     CDS             3293..3775
                     /gene="rlmH"
                     /locus_tag="VHZ56_00355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014489502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEX4296450.1"
                     /translation="MRVGILAVGRMKQGAERELVSRYLDRAAASGRSLGLSGFAVTEL
                     AESRAGSAPARKTDEAKSIREHLSGAVTLVALDEHGSLMGSEDLARRIGRWRDDGKAA
                     VSFLIGGADGLDPALVRNADLALSFSPLTWPHQLVRVMLAEQLYRTTTILSGHPYHRE
                     "
BASE COUNT          621 a         1396 c         1234 g          587 t
ORIGIN      
        1 ggccgccacg gcatcgtcac cggccagatc ctcataacac ccaatatcac cgaggagcgg
       61 cgctatttcc tcaacgcccg cacgacgata accacgctgc tgaacctcgg ggcggtcccc
      121 atcatcaacg agaacgactc cgtcgccacc gccgagatcc gctacggcga caacgaccgc
      181 ctgagcgccc gggtggcgac gatggtcgag gccgactgcc tggtcctgct ctccgacatc
      241 gatggcctct acaccgctcc gccggcgcgc gatccggcgg ccaaccacat tccctatgtg
      301 cctcagatca cagcggaaat cgaagcgatg gcgggcggcg cggcctcgca tctgagccgc
      361 ggcggcatga ccaccaagat cgaggccggc aagatcgcga cccaggccgg caccgccatg
      421 atcatcgccc gcggcaccga cctccacccc ctccgcgcgc tcgaaaatgg tggcacacat
      481 acgctctttg cggccgcgga atcgcgcgcc caggcccgca agcgctggat catggggacg
      541 ctcgccccgg ccggcgaggt ccacgtcgac gccggcgccg cccgcgccct cctcgacggc
      601 aagagcctgc tgccgatcgg cgtcaccggc gtcaccggcg agttcgtccg tggcgacgcc
      661 gtcgcgatcc tcgatcccac cggccgcgag atcgcccgcg ggctggtggc gctcggccgt
      721 gacgaggccg aacttgtgaa gggcaagaac tcccgccgcg tcgccgagat tctcgggctc
      781 ggggggcgtt cggagctcgt ccatcgtgat aatatggtgg tgctcgccgg gctggagacc
      841 cgaaccgcat gaacgccatc gatcccgaca ttccagccct gatgtcggcc atcggccgcc
      901 gtgcccgcgc cgccgccggc atcctggcct tcgcctccac ggaggccaag aacctcgccc
      961 tgactgccgc ggccgacgcc atcctcgcgg agcgcgcggc catcctcgcc gccaatgcag
     1021 aagacgccgg gcgcgcaaaa gaacatggta tctccaccgc gttcctggac cgcttgacgg
     1081 tcaccgaagc ccggctcgac ggcgtcgccc gcggcctccg cgagatcgcg gcgctccccg
     1141 acccggtggg cacggtcacg gccgagtggc gccggcccaa cggcctcgac atctcccgcg
     1201 tccgcacgcc gctcggggtg atcggggtta tcttcgagag ccggccgaac gtgaccgccg
     1261 acgccggcgc gctgaccctc aaatcgggca acgccgtgat cctgcgcggc ggctcggaag
     1321 cgacgcgcac ctcgcgcgcc atccacgcct gcctgctcgc cgggctggag gccgccggcc
     1381 tgccggtcga cgccatccag ctggtgccca ccagcgaccg tgttgccgtt ggcgaaatgc
     1441 tggccggcct cggcggcaac atcgacgtca tcgtgccgcg cggtggcaag accctggtgg
     1501 cccgggtcga ggccgaggcg cgggtgccgg tctttgccca tctcgagggc ctctgccaca
     1561 ccttcatcga cgcgtctgcg gacctgcaga tggctgtgga cgtgacggtc aacgccaaga
     1621 tgcggcgcac cggtgtctgc ggcgcgaccg agactctcct gatgcacaag ggcgttctcg
     1681 ccacgcatct gcggccgatc ctcgacgcgc tggtggcgcg cggctgcgag atccggggcg
     1741 acgcgacggt gcagcggctc tatccggccg cccggcctgc caccgaggcg gactggcata
     1801 ccgagtatga agacgcgatc atttccgtca aggcggtgga cgatgttggc gaggcaatcg
     1861 cccacatcac gcaatatggc tcgcaccaca ccgaggcgat catttccgag gacccggttt
     1921 cggtcggccg cttctttacc gagatcgaca gcgccatcct cctccataac gcctcgacgc
     1981 agttcgccga cggcggcgag ttcggcttcg gtggtgagat cggcatcgcc accggcaagt
     2041 ttcacgcccg tgggccggtc ggtctcgaac agctctgctc gttcaagtac ctggtgcgcg
     2101 gcaacgggca gctcaggccc tgatgccggc gtccggcctc cctccggcgg cgcccggcga
     2161 acggatcggg ctgttcggcg gcagcttcaa tccggcccat gaggggcatc gcctcgtcgc
     2221 gctggaatgc ctcaagcggc tggccctcga ccgggtctgg atcctcgtct cgccgggcaa
     2281 tccgctcaag gaccatgccg agctggcgcc gctacccgac cgcatggcac aaaccgtcaa
     2341 gctgatggac gacccccggc tcgcagtgac cggcttcgag gcggcggagg gcttcaccta
     2401 cacctggcag acgctcgact ttctccatcg cgccctgccg gacgtgcggc tggtctggat
     2461 catgggcacc gacagcctcc agactttcga ccattgggaa cggtgggaag acgtggcccg
     2521 gacgatgccg atggcgatct acgcccgccc cggctcggcc tttacggcca ccagcggccg
     2581 cgcggcgacg gcccttgcgg cctatcggct gcccgaagcc gaggcctcca gcctcgccga
     2641 tcgaaccccg cccgcatggg tctatctcca cggcgtcatg tcgccgctgt cctcgaccgc
     2701 catccgcgag gcgcagaagt cacctcaatg aaaccttcgc cttgcacaat aaggcgcgaa
     2761 gcaccattgt tgtgcggtgg gccgcaggcc cgcaacacgg gaaaacggcc atcgcacctc
     2821 gactgcgacc tttttcgatc ccaacaccaa ggaatgctga taaccgcatg acccatgcac
     2881 gcgcatgggc ggaggcccgc tgatggtggc ttcgcccagg aaaaagcccg ccgcggctgc
     2941 tccctctgcc ccgccccgaa tgatcgatgt ggtgctgcaa agcctcgacg acgccaaggc
     3001 cgaggaagtg gtagccattg atatctcagg caaatcctcg ctcgccgact tcatggtggt
     3061 gggctccgga cgctccaacc ggcatgtcag cgcggtggcc gaccaggtca tgaaggcctt
     3121 gcgcgagcac ggcttcgaca agccccgggt cgagggactg ccgcacgccg actgggtgct
     3181 ggtcgatggt ggcgacgtga tcgtccacat cttccggccg gaagtgcgcg agttctacag
     3241 cctcgagaag atgtggcagg ccgacttcgc cgccgacgcc agctaactcg ctgtgcgcgt
     3301 tggcattctt gccgtcggcc ggatgaagca gggagccgag cgcgagctgg tttcgcgcta
     3361 tctcgaccgc gccgcggcga gcggccggtc gctgggattg tccggtttcg cggtgaccga
     3421 actggccgag tcgcgggccg gcagcgcccc cgcccgcaag accgacgaag ccaagtccat
     3481 ccgtgaacat ctgtcaggcg ccgtcacgct ggtagcgctc gacgagcatg gcagcctcat
     3541 gggctcggag gacctggcgc ggcgcatcgg tcgctggcgc gacgacggca aggcggcggt
     3601 cagtttcctc atcggcggcg ccgacggact cgacccggcg ctcgtgcgca atgccgacct
     3661 ggcgctgagc ttttcgccgc tcacctggcc gcaccagctg gtgcgcgtca tgctggccga
     3721 gcagctctac cggacgacga cgatcctctc cggccatccc taccatcgcg agtagcggcg
     3781 gccatccaaa agccaaagag atcgggctgc ttacgaccgc ggctgctagc attccggc
//
LOCUS       DATAZA010000015         1570 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3134010, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000015 DATAZA010000000
VERSION     DATAZA010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3134010"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1333)
                     /locus_tag="VHZ56_00360"
     CDS             complement(<1..1333)
                     /locus_tag="VHZ56_00360"
                     /inference="COORDINATES: protein motif:HMM:TIGR00196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEX4296451.1"
                     /translation="MSERDDHILLTPAEMARADRLAAASGIASLALMENAGRAVTTEI
                     LRRFGKRPVLVLCGPGNNGGDGFAVARQLREAGWPVHVHLAGERSRLKGDAAVNADRW
                     GETGPADFAAAGLIVDALLGAGLDRDVGGAMAALIGSVSRSGVPVVSIDVPSGVDGGS
                     GAVRGSAITARLTVTFFRRKPGHLLVPGRDLCGEVVLADIGIPASVLAPIEASTHANG
                     PWLWSVPQVAREAHKYSRGHCVVVSGGPLQTGASRLTASAALRIGAGAVSLAGAPDAL
                     AVQAAHVTAIMLRPFEDAAGLRGIIGSRVDAVVIGPAAGVTPETRQHVLDILELAPAA
                     VLDADALSVFKDEPGTLFQAIAARPERPVILTPHEGEFVRLFGEIDGSKLERARTASA
                     RSGAVVIYKGSDTVIAAPDGRAAINSNAPAGLGTAGSGDVLAGIAGGLLAQR"
     gene            complement(1330..>1570)
                     /locus_tag="VHZ56_00365"
     CDS             complement(1330..>1570)
                     /locus_tag="VHZ56_00365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="glyoxalase"
                     /protein_id="HEX4296452.1"
                     /translation="GGLWLRSGEDELHLGVEDDFRPARKAHPAFVVADLDAVARRLTA
                     AGAEPAFDDAIAGVRRFYVADAVGNRLEFMEEGGQ"
BASE COUNT          218 a          628 c          518 g          206 t
ORIGIN      
        1 tccgctgcgc cagcagcccg ccggcgatgc ccgccagcac gtcgcccgaa ccggccgtcc
       61 cgagcccggc gggcgcgttc gagttgatcg cggcgcgtcc atccggcgcg gcgatcaccg
      121 tgtcgctgcc cttgtagatc accaccgcgc ccgagcgcgc cgacgccgtc cgcgcccgct
      181 cgagcttgct gccgtcgatc tcgccgaaca gccggacgaa ttcgccctcg tgcggggtga
      241 ggatcaccgg ccgctccggc cgtgccgcaa tcgcctggaa cagggttccg ggttcatcct
      301 tgaacaccga cagggcgtcg gcatcgagca ccgccgccgg cgccagctcg agaatgtcga
      361 gcacgtgctg gcgcgtctcg ggcgtcaccc ccgccgccgg cccgatcacc accgcatcga
      421 cgcgcgagcc gataatccca cgcaagcctg cggcgtcctc gaacggccgg agcatgatgg
      481 ccgtgacgtg cgccgcctgc accgccagcg cgtcgggcgc cccggcgagg ctgaccgccc
      541 ccgcgccgat ccgcagcgcc gcacttgccg tcagccggct ggcgccggtc tgcagcggcc
      601 cgcccgatac caccacgcag tggccgcgcg aatatttgtg ggcctcgcgc gccacctgcg
      661 gcaccgacca cagccacggc ccgttggcat gcgtgctagc ctcgatcggg gccagcaccg
      721 acgccggaat gccgatgtcg gccagcacca cttcgccgca gaggtcgcgc cccggcacca
      781 gcagatgccc cggcttccgc ctgaagaatg tgacggtgag tctggcggtg atggcgcttc
      841 cccgcaccgc cccgctgccg ccgtcgacgc cgctcggcac gtcgatcgag acgaccggaa
      901 cgccgctccg gctgacgctg ccgatcagcg ccgccatcgc gccgccgacg tcgcggtcga
      961 gcccggcgcc gagcagcgcg tcgacgatca agccggcagc ggcgaaatcg gctggtcccg
     1021 tctcgcccca gcgatcggcg ttcacggccg cgtcgccctt gagccgcgat cgctcgccgg
     1081 cgaggtgcac gtgcaccggc catcccgctt cgcgcaattg ccgggccacc gcgaaaccgt
     1141 cgccgccatt gttgccgggc ccgcagagca ccagcaccgg ccgcttgccg aaccggcgca
     1201 ggatctcggt ggtcactgcc cgcccggcgt tctccatcag cgccagcgag gcgatgccgg
     1261 acgctgccgc cagccggtcg gcacgcgcca tctcggcggg ggtaaggagg atgtggtcgt
     1321 cgcgctcgct cactggccgc cctcttccat gaactcgagc cggttgccga ctgcgtccgc
     1381 cacgtagaaa cggcgcactc ccgcaatcgc gtcgtcgaac gcgggttccg cgccggccgc
     1441 cgtcagccga cgggcgacgg catcgagatc ggccaccacg aatgccgggt gcgccttgcg
     1501 ggcgggccgg aagtcgtcct ccaccccgag atgaagttca tcctcgccgc tgcgcagcca
     1561 caggccgccg
//
LOCUS       DATAZA010000016         1872 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1277645, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000016 DATAZA010000000
VERSION     DATAZA010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1872
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1277645"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..710)
                     /locus_tag="VHZ56_00370"
     CDS             complement(<1..710)
                     /locus_tag="VHZ56_00370"
                     /inference="COORDINATES: protein motif:HMM:NF024120.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HEX4296453.1"
                     /translation="MSGIVINRRRLLGGLALGLLLPGLATAARAAPPIDAAAEFGLDP
                     NDGGDQSEKLQAAFDAAARDGRLLLLPAGSFTVGNLEIADGVQVLGIRGRTILTTPGS
                     TRLGHIAKATGIAIEGVTFAASAPDSAAGVNGLLEIENSTGVTFRQCTFRNSGANGIA
                     ANGSAVTVEDCDFAAMAAAAIHSQNGQGLTIRGNRISDCGNAGIRIWRDDAGPDGSIV
                     SGNRIGKIDFTDGGNGQNG"
     gene            complement(771..1097)
                     /locus_tag="VHZ56_00375"
     CDS             complement(771..1097)
                     /locus_tag="VHZ56_00375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008549564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjQ family protein"
                     /protein_id="HEX4296454.1"
                     /translation="MLLSTTEELQGFEITDYLGLVHGEVVSGANILRDVMATVTDFVG
                     GRSAAYEDELVHSREAVLRDLSDRAQRLGADAVLALELDFEVIGSRGAMLMVTAVGTA
                     VRLRKV"
     gene            1223..>1872
                     /locus_tag="VHZ56_00380"
     CDS             1223..>1872
                     /locus_tag="VHZ56_00380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006939450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HEX4296455.1"
                     /translation="MLVDDRVFIGVSTRPEYLALKYANRHGLITGATGTGKTVTLQGL
                     AEGFSRAGVPVFLADVKGDLAGIAATGEARDFLVKRAQDIGFDDWKTDKFPAIFWDLF
                     GKSGHPVRATISEMGPLLIARILDLNDTQEGVLNVAFKFADDNGLLLLDLKDLRALLV
                     EVERRSSELSATYGNVATATVGAVQRALLVLEQQGGANFFGEKALEIADLMRVAPDG"
BASE COUNT          287 a          717 c          563 g          305 t
ORIGIN      
        1 ccgttctgcc cgttgccgcc gtcggtgaag tcgatcttgc cgatgcggtt gccggaaacg
       61 atcgagccgt ccggccccgc atcgtcccgc cagatccgga tgccggcgtt gccgcaatcg
      121 ctgatgcggt tcccccggat cgtcagcccc tggccgttct gcgaatggat cgccgcggcc
      181 gccatcgccg cgaagtcgca gtcctcgacc gtcaccgccg agccgttggc cgcgatgccg
      241 ttcgcccccg agttgcggaa cgtgcactgc cggaacgtca cgccggtgct gttctcgatc
      301 tcgagcaggc cgttgacgcc ggccgcgctg tccggcgcgc tggcggcaaa agtcacgccc
      361 tcgatcgcga tcccggtcgc cttggcgatg tggccgagcc gcgtcgaacc cggcgtggtg
      421 aggatcgtcc gtccccggat gccgaggacc tgcaccccgt ccgcgatttc gaggttgccg
      481 acggtgaaac ttccggccgg cagcagcagc agccgtccgt ccctggctgc cgcatcgaac
      541 gccgcctgca gcttctcgct ctggtcgccg ccgtcattcg gatcgagtcc gaactcggcc
      601 gctgcgtcga tcggcggcgc ggcccgcgct gccgtcgcca gccccggcag cagcagcccc
      661 agggccagcc cgcccagcag tcgccgccga ttgatgacaa tcccgctcat tccgcgattg
      721 tcgcggaatc gccaccccgc cgccaacgct ttggtcccga ttggtgaacg ctacactttc
      781 ctcagccgca ccgccgtgcc caccgccgtc accatcaaca tcgcgccacg cgagccgatc
      841 acctcgaaat cgagctccag ggccagcacc gcatcggccc ccagccgctg cgcccgatcg
      901 ctcaaatcgc gcagcaccgc ctcgcgcgaa tgcaccagct cgtcctcgta cgccgccgag
      961 cgcccgccga cgaagtcggt gaccgtcgcc atcacgtcgc ggaggatatt ggcccccgac
     1021 acgacttcgc catgcaccag cccgagatag tcggtgatct cgaatccctg cagttcctct
     1081 gtcgtcgaca gcagcatgtg cccctcctgc gttccggccc tcagatggga tgcgctgcgg
     1141 ccaccgacaa gccggggtgg cggggcaggg gcgctcggct atagtgcgca cccgaatccc
     1201 ggaggaggtc gccttgccca acatgctcgt cgacgaccgc gtcttcatcg gcgtcagcac
     1261 ccgccccgaa tacctggcgc tgaaatacgc caatcgccac ggcctcatca ccggcgccac
     1321 cggtaccggc aagaccgtaa cgctgcaggg cctcgccgag ggcttttccc gtgccggggt
     1381 cccggtcttc cttgccgacg tcaagggtga cctcgccggc atcgccgcta cgggggaggc
     1441 cagggacttt ctcgtcaagc gcgcccagga catcggcttc gacgactgga agaccgacaa
     1501 attccccgcg atcttctggg acctcttcgg caagtccggc catccggtgc gcgccacgat
     1561 ctccgaaatg ggaccgctgc tcatcgcccg catcctcgat ctcaacgaca cccaggaggg
     1621 cgtgctcaac gtcgccttca agttcgccga cgacaatggc ctgctgttgc tcgacctcaa
     1681 ggacctccgc gcgctgctgg tcgaggtcga gcgccgctcg tccgaactca gcgcgactta
     1741 cggcaatgtc gccaccgcca cggtcggcgc cgtgcagcgc gccctgctcg tcctcgagca
     1801 acagggcggc gccaatttct tcggcgaaaa ggccctcgag atcgccgacc tgatgcgcgt
     1861 cgcgcccgac gg
//
LOCUS       DATAZA010000017         6072 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1045490, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000017 DATAZA010000000
VERSION     DATAZA010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6072
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1045490"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..419
                     /locus_tag="VHZ56_00385"
     CDS             <1..419
                     /locus_tag="VHZ56_00385"
                     /inference="COORDINATES: protein motif:HMM:NF026165.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX4296456.1"
                     /translation="CPLAEGCTGRRLDPLAFPVKAEKPLRPTRYGHAFVMRERDGDVY
                     LRSRADTGLLARMTEPPVSDLTGTPAPPQFPVAADWRHHGQVIHVFTHFRLELDIWSA
                     TVPDPSLLTDGWWSDDLGNEALPTVFRKALAMAGLE"
     gene            complement(528..1658)
                     /locus_tag="VHZ56_00390"
     CDS             complement(528..1658)
                     /locus_tag="VHZ56_00390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEX4296457.1"
                     /translation="MLRTARTARSADAERASLPVDTILVGDSIAHMNALPAGSVDLIF
                     ADPPYNLQLADGLTRPDQSRVDAVDDDWDKFESFAHYDRFSRDWLAAARRLLKPNGAI
                     WVIGSYHNIFRVGTTLQDLGFWMLNDVIWRKANPMPNFRGTRFTNAHETLIWAARDKS
                     SRVTFNYESLKQANDDTQMRSDWLFPICTGAERLTDANGDKVHPTQKPEALLFRIMNA
                     TTKPGDVVLDPFFGTGTTGAVAKKLGRRFIGIERDESYIAAALKRIAAVRPLPAAAIE
                     TAVPKRQATRVAFGALVESGAIAPGTELTDGRGRWSALVRADGSLASGPHQGSIHRVG
                     ALVSGAEACNGWTFWHTSANGRLHPIDLLRADMRAQMERLSA"
     gene            complement(1744..2970)
                     /locus_tag="VHZ56_00395"
     CDS             complement(1744..2970)
                     /locus_tag="VHZ56_00395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004110659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4296458.1"
                     /translation="MTATVTDPPSALQQVIASPLYRGATIAMLLSGIGTSAAAPQIVL
                     FLVNDLGASLPTAGLYYLTSLAAPVAGYLVGAYSDRTGGRLGLFRLCALAGFIGWAAI
                     SASTQIWMPFVISALVLAFSGAATSQLFAAVHDDLVRRPAPTNEGVVAVIRMALTAGW
                     VIGPVLGTWLAAETSLRTMLWVTALCSLAQIVPLGALRAGRAAAAEAGSAAVVKPPGL
                     RVMAQLLAFTGLYVLVYAGESIKYGFLPLYMDDQLHLAPAVRGAVIGIQPLIELIIMP
                     FSVLAGRRIGILWLMCIGAAFGVAANVCFATTGSAAGMFAGQIFMGGVWGIFAALGII
                     VAQRLLPTAVATASAIFLSSTALSSALGGVTGGIGVAVLGLPQVFFVPAAFGVLAVIG
                     LAAMARSKALDAPPSR"
     gene            complement(2981..3730)
                     /locus_tag="VHZ56_00400"
     CDS             complement(2981..3730)
                     /locus_tag="VHZ56_00400"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016552937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEX4296459.1"
                     /translation="MGADSRDATSVEKLWPDLRLEKRAVRRGATLVAGVDEAGRGPLA
                     GAVVVAAVILNRRRIPEGIHDSKQLTADERERLHDEIVATATVSVAAAPMSVIAELNI
                     LHATLWAMRRAVMGLSLAPDHVLIDGNVVPRGLPCQGEAVVGGDGLSLSIAAASIVAK
                     VTRDRMCAIMHCEEPQFGFDSHKGYSAAAHFRALETHGPGRYHRMDFAPCVEADTRLR
                     TGVRIGPLTPAGWSAVPRPQLELAFERADAA"
     gene            3901..5538
                     /locus_tag="VHZ56_00405"
     CDS             3901..5538
                     /locus_tag="VHZ56_00405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007773624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005436 - sodium:phosphate symporter
                     activity [Evidence IEA];
                     GO_process: GO:0044341 - sodium-dependent phosphate
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HEX4296460.1"
                     /translation="MAVLGLLGAIALFLWGTHMAQTGVQRALGPRLRRILGTTLSNRV
                     KAFFAGIGLTLLLQSSTATGLMAASFTANGIVDLLPAMAVVLGANVGTALIVQVLSFD
                     ISIVSPVLVLAGYLMFRRSENSMLHDLGRALVGLGLMLLALHQMLAILGGVENAVEFR
                     AAIGIVAAVPALGFVLAALAAWGVHSSVAIVLLVMSLATHGALPLDVAFVSVLGANFG
                     TAINPLLELSTPTREARRLPLGNLLNRVLGIVVALFVVGPAARWLGQLLAPGQAVATF
                     HLLFNLVLALCFLPFLRPAGNLLKRLMPAQPAANPAAPLYLDRSARETPLVALGGAAR
                     EALRLADVLEEMLHGARDALARGDRRKIEETRDRDDVLDGLNTAIKTYLTSIEPESLA
                     DVDQRRLNQILVFSMNIEQAGDVIDRNLLPHVSKRLKRGLVGTNGADAELAGLMDRLV
                     TNLRTAASLFMTDDARVARQLAEEKVTFRRAEREAVASHFDIMRSDRQASGMSSAIHL
                     DLLRDMKLINSLIVAAAAYPVLDKTGELLPTRLVAQS"
     gene            complement(5543..>6072)
                     /locus_tag="VHZ56_00410"
     CDS             complement(5543..>6072)
                     /locus_tag="VHZ56_00410"
                     /inference="COORDINATES: protein motif:HMM:NF025341.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="retropepsin-like aspartic protease"
                     /protein_id="HEX4296461.1"
                     /translation="DRGVGDRGSIIATFMASLSGPLGSATPVPSDQTSSPPVSDAGSD
                     QPMQTAEVPVRSSGGTFVVPVLINGIITLDFLIDSGASDVSIPADVVLTLMRAGTISK
                     DDFLGTQTYTLADGTTVPSQTFTLHSLKLGDVVINDVVASMGSPEGTLLLGQSFLSHF
                     QKWSIDNKRQLLVLN"
BASE COUNT          973 a         2185 c         1959 g          955 t
ORIGIN      
        1 tctgcccgct ggccgagggc tgcaccggcc gccggctcga cccgctggcg tttccggtca
       61 aggccgaaaa gccgctccgg cccacccgct atggccacgc cttcgtcatg cgcgagcgcg
      121 acggcgatgt ttacctgcgc agccgcgccg acaccgggct gctcgccagg atgaccgagc
      181 cgccggtctc cgacttgacc ggaaccccgg cgccgccgca attccccgtc gccgccgact
      241 ggcgtcacca cgggcaggtg atccacgtct ttacccattt ccggctcgag ctcgacatct
      301 ggtccgccac cgtccccgac ccgtcgctcc tcaccgacgg ctggtggtcg gacgatctcg
      361 gcaacgaggc cctgcccacg gtcttccgca aggcattggc gatggcgggt ctggagtagc
      421 acccgcagca gatcgccact gaggcgcccg gccagctcac gaagaaaatg ccgccggtgc
      481 cgttctggca ccggcggcag gtctgcccga agactggagg tcatagctca ggcggaaagt
      541 cgctccatct gcgcccgcat gtcggcgcgg aggaggtcga tagggtgcag ccggccgttg
      601 gcgctggtgt gccagaaggt ccagccgttg caggcctcgg cccccgagac cagcgcgccg
      661 acgcggtgga tcgagccctg gtgcggtccc gacgccagcg agccgtccgc ccgcaccagc
      721 gccgaccagc gcccgcgacc gtcggtcagc tcggtgccgg gcgcaatcgc gccgctctcg
      781 accagtgccc cgaaggccac ccgcgtcgcc tgccgcttcg gcacggccgt ctcgatggcc
      841 gccgccggca gcggccggac cgccgcgatc cgcttgagcg cagccgcgat gtagctctcg
      901 tcgcgctcga tgccgatgaa ccgccggccg agcttcttgg ccaccgcgcc ggtcgtgccg
      961 gtgccgaaga acgggtcgag cacgacgtcg ccgggcttcg tcgtcgcatt catgatgcgg
     1021 aacagcagcg cttccggctt ctgcgtcggg tgcaccttgt cgccgttcgc gtcggtcagc
     1081 cgttcggccc cggtgcagat cggaaacagc cagtcgctgc gcatctgcgt gtcgtcgttg
     1141 gcctgcttca gcgactcgta gttgaaggtc acccgcgagc tcttgtcgcg cgccgcccag
     1201 atcagcgtct cgtgcgcgtt ggtgaagcgc gtgccgcgga aattcggcat cgggttggcc
     1261 ttgcgccaga tcacgtcgtt gagcatccag aacccgaggt cctggagcgt cgttccaacc
     1321 cggaagatgt tgtggtagct gccgatcacc cagatcgcgc cgttcggctt cagcagccgc
     1381 cgcgccgccg ccagccagtc gcggctgaag cggtcgtaat gggcaaagct ctcgaacttg
     1441 tcccagtcgt cgtcgaccgc atcgacgcgc gactggtcgg gtcgcgtcag cccgtccgcg
     1501 agctgcaggt tgtagggcgg gtccgcaaaa atcaggtcaa ccgagccggc cggcaaggca
     1561 ttcatgtgag cgatgctgtc gccgacgaga atcgtgtcga ccggcaggct cgctcgttcc
     1621 gcatcggccg aacgggccgt acgcgcggta cgcaacatcc tcgtaaccct aacgcagcac
     1681 taacgaggct ggttgtaagg gcttagggtt aaaggcgatt taagcgcgtg ggtgaatgaa
     1741 aggttaccgg gacggcggtg cgtccagcgc cttggatcgt gccattgccg ccaatccgat
     1801 caccgcgaga acgccgaatg ccgcgggcac gaagaacacc tgtggcaatc ccagcacggc
     1861 aacgccgatg ccgccggtga cgccgccaag cgcgctgctg agcgccgtcg agctcaggaa
     1921 gatcgccgac gccgtcgcca ccgctgtcgg cagcaggcgc tgcgccacga tgatgccgag
     1981 tgcagcgaag atgccccaga cgccgcccat gaagatctgg ccggcgaaca tgccggcggc
     2041 actgccggtg gtcgcaaagc agacattggc cgcgaccccg aacgccgctc caatgcacat
     2101 cagccagagg atgccgatcc gccgcccggc cagcacgctg aacggcatga tgatgagctc
     2161 gatcagcggc tggatgccga tcaccgcgcc gcgcacggcc ggggcgagat gcagctggtc
     2221 gtccatgtag agcggcagga agccgtattt gatggactcg ccggcgtaga ccagcacgta
     2281 gagcccggtg aacgccagca gctgcgccat cacccggagc cccggcggct tcacgacggc
     2341 cgcgctgccg gcctccgccg cggccgcgcg tccggcgcgc agcgcgccca gcggcacgat
     2401 ctgcgccagc gagcagaggg cggtgaccca gagcatggtc ctgaggctcg tctccgccgc
     2461 cagccacgtc cccagcaccg ggccgatcac ccagccggcc gtcagcgcca tccggatgac
     2521 tgcgacgacg ccctcgttgg tgggtgccgg ccgtcgtacc aggtcgtcgt gcaccgccgc
     2581 gaacagctgc gacgtcgccg cgcccgaaaa cgccagcacc agcgcgctga tgacgaacgg
     2641 catccagatt tgcgtcgagg cggagatcgc ggcccagccg atgaacccgg ccagcgcgca
     2701 gaggcggaac agcccgagcc gtccgccggt gcggtccgaa taggcgccga cgaggtagcc
     2761 ggcgaccggc gcggcgaggc tcgtgagata gtagagcccg gcggtcggca gcgaggcgcc
     2821 gaggtcgttg acgaggaaca gcacgatctg cggcgccgcg gcggaagtac cgatgcccga
     2881 cagcagcatg gcgatcgtcg cgccgcgata gagcggggag gcgatgacct gttgcagcgc
     2941 cgagggcggg tcggtgacgg tggcggtcat ggtgcggctg tcaagcggcg tccgcccgtt
     3001 cgaacgccag ctccagctgc ggcctcggta ccgcgctcca gcccgccggc gttagcggtc
     3061 cgatcctgac gccggtgcgc agccgggtgt cggcctcgac gcagggcgcg aaatccatcc
     3121 ggtgataccg gcccggcccg tgcgtctcga gcgcgcggaa atgcgccgcc gcggaatagc
     3181 ccttgtggct gtcgaagccg aattgcggct cttcgcaatg catgatcgcg cacatccggt
     3241 cgcgcgtcac cttggcgacg atcgacgccg ccgcgatcga caggctgagc ccgtcgccac
     3301 ccaccaccgc ctcgccctgg cacggcagcc cgcgtggaac gacgttccca tctatcagca
     3361 catggtcggg ggcgaggctg agacccatca ccgcgcgccg catcgcccac agcgtcgcgt
     3421 ggaggatgtt gagctcggcg atcaccgaca tcggcgcggc cgccaccgaa accgtcgccg
     3481 tcgcgacgat ttcgtcgtgc agccgctcgc gctcgtccgc cgtcagctgc ttggaatcgt
     3541 ggatgccctc ggggatgcgc cgccggttga ggatcaccgc cgccaccacg accgccccgg
     3601 cgagcggccc gcgcccggcc tcgtcgacgc cggcaacgag cgtcgcgccg cggcgcaccg
     3661 cgcgcttctc gagcctcaaa tccggccaga gcttttcgac agaggtcgcg tcgcgcgaat
     3721 cggcacccat ggtcccgaga atgccgcttt tgcagcgcct cacaagtcgc gctggaaagt
     3781 cccaagaaaa agcttttaga ctctggacct tcgggcgcat tatgacagtt tgatgacacc
     3841 agccggcggc gcacgcctcc ggcgacggcg gtgaaaggca gggcaggggt ggacttcaca
     3901 ttggccgttc tcggccttct gggcgcgatc gcgctgttct tgtggggcac ccacatggcg
     3961 cagaccggcg tgcaacgcgc cctcggtccg cgcctccgcc gcatcctcgg caccactctc
     4021 tccaaccggg tcaaggcctt cttcgccggc atcggcctca ccttgctgct gcagtcgagc
     4081 accgccaccg ggctgatggc cgccagcttc accgccaacg gcatcgtcga cctgctgccc
     4141 gccatggccg tggtgctcgg cgccaatgtc ggcaccgcgc tcatcgtcca ggtgctgtcc
     4201 ttcgacatct ccatcgtctc gccggtgctg gtcctcgccg gctatctgat gttccggcgc
     4261 agcgaaaact ccatgctgca cgacctgggc cgcgccctgg tcggcctcgg cctgatgctg
     4321 ctcgccctgc accagatgct ggcgatcctc ggcggcgtcg agaacgccgt cgagttccgc
     4381 gccgccatcg gcatcgtcgc cgccgtgccg gccctcggct tcgtgctcgc cgcgctggct
     4441 gcctggggcg tccactccag cgtcgccatc gtgctgctgg tgatgtccct cgccacccac
     4501 ggcgccctgc cgctcgacgt cgccttcgtt tccgtactcg gggccaattt cggcaccgcc
     4561 atcaatccgc tgctcgagct cagtaccccg acgcgcgagg cccgccgcct accgctcggc
     4621 aatctcctga accgcgttct agggatcgtc gtggcgctgt tcgtggtcgg ccccgcggcg
     4681 cgctggctcg gccagctgct cgcccccggg caggcggtcg caaccttcca cctgctgttc
     4741 aacctggtgc tggcactgtg cttcctgccg ttcctgcgcc cggccggaaa cctcctgaag
     4801 cggctgatgc cggcccagcc ggcagccaac ccggcggctc cgctctatct cgaccgcagc
     4861 gcccgcgaga ccccgctcgt cgccctcggc ggcgccgccc gcgaagccct gcgcctcgcc
     4921 gacgtgctcg aggaaatgtt gcatggggcc cgcgacgccc tggccagggg cgaccgccgc
     4981 aagatcgagg agacgcgcga ccgcgacgac gtgctcgacg gtctcaacac cgccatcaag
     5041 acctacctca cctcgatcga gcccgaatcc ctcgccgatg tcgaccagcg ccggctcaac
     5101 cagatcctcg tcttctcgat gaacatcgag caggccggag acgtcatcga ccgcaacctc
     5161 ctgccgcatg tcagcaagcg cctgaagcgc ggcctcgtcg gcaccaatgg cgccgatgcc
     5221 gagctcgccg gcctgatgga ccggctggtc accaacctgc gcaccgccgc ctcgctgttc
     5281 atgaccgacg acgcccgcgt cgcccgccag ctcgccgagg agaaggtcac cttccgccgt
     5341 gccgagcgcg aagcggtggc gtcgcacttc gacatcatgc gctccgaccg ccaggccagc
     5401 ggcatgtcga gcgccatcca tctcgacctg ctgcgcgaca tgaagctgat caactccctg
     5461 atcgtcgccg ccgccgccta tccggtcctc gacaagaccg gcgagctgct gcccacccgg
     5521 cttgtggctc agagctagaa aatcagttta ggacgagcag ctgacgcttg ttgtcgattg
     5581 accacttctg aaagtggcta aggaagctct ggcccaggag caaagtcccc tcgggggatc
     5641 ccatgctggc gactacatcg ttgatgacga catctcccag cttcaaggag tgcaatgtga
     5701 aggtttgcga tggcaccgtc gtgccatctg ccagggtgta ggtttgtgtt ccaaggaaat
     5761 cgtccttgct gattgttccc gctcgcataa gggtcagcac cacgtccgcc ggaatgctta
     5821 cgtccgaagc accgctgtcg atcaggaaat cgagcgtaat gatgccattt ataaggacgg
     5881 gaacgacaaa ggttccgccg ctcgatcgca ccggcacttc ggccgtctgc atcggctgat
     5941 cgctgccagc gtcgctgacc ggaggcgatg atgtctgatc ggaggggaca ggagtagcgg
     6001 aaccaagtgg gccggacagc gatgccatga acgtcgcgat tatcgagccg cgatcgccaa
     6061 cgccacgatc cc
//
LOCUS       DATAZA010000018        14049 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2902638, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000018 DATAZA010000000
VERSION     DATAZA010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 14049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14049
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2902638"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..638)
                     /locus_tag="VHZ56_00415"
     CDS             complement(<1..638)
                     /locus_tag="VHZ56_00415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HEX4296462.1"
                     /translation="MRRKIIIDTDPGQDDAVAILLALGSPAEIEVLGIVAVAGNVGLT
                     QNAQNALKVVELSGRTDTPVYAGCERPMRRKLVTAEYVHGKTGIDGPTLPDPRITLRE
                     QHGVDFIIDTLRREPAGTVTLCALGPLTNLGMAFVKAPDIMPRVQEIVLMGGGLFEGG
                     NITPAAEFNIYVDPEAADVVFHSGIPITVVPLDVTHFMLSTKTRVARFRALG"
     gene            757..1989
                     /locus_tag="VHZ56_00420"
     CDS             757..1989
                     /locus_tag="VHZ56_00420"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX4296463.1"
                     /translation="MRQPHTIRRSARLDRDLANTRFERILGNASQLAIVFVGCVLGLV
                     TIQSAQFILAPIFLAIIIGLMSGPIADAMERRGVPTPLSAAVVVLVLVAVIAAAVFAF
                     SGPLSVWVQRAPAIWDKLKNEVASWKGAIDAVGAIQTQLQSIFGGGSAVEVKVQDGGP
                     ITDIAFLAPVALGQVLIFLGGLYFFLAARDAIRIGVLSLCFTRKVRWRTAHVFRDVET
                     RVSRYLLTITLVNICLSSLVALAMWIVGMPSPLLFGALAFVLNYIPFIGQATMLALIF
                     LIGLGTRDGLTSALLPVACYWGLSFLESQVVTPNLLGRTMTINPFLIFLSLTFWLWAW
                     GPVGGLVAVPSVLVLHSVITHIIPTRSVVPARVRRKIDRKATADTREAEPDRVPPAPT
                     ATELKPQRTAKAAVAPSP"
     gene            2038..3894
                     /locus_tag="VHZ56_00425"
     CDS             2038..3894
                     /locus_tag="VHZ56_00425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation:proton antiporter-2 (CPA2)
                     family protein"
                     /protein_id="HEX4296464.1"
                     /translation="MAGEAVNQAATVVSNIDLMQVLALLAAGVIAVPIFKRAGLGSVL
                     GYLAAGLVIGPFGLRLIADPESVLRVSELGVVLFLFIVGLEMEPSRLWSLRKQIFGLG
                     VIQVAICGALLTGVGVVLGLPPVVAFVAGMGFVLTSTAIVMQLLTERGDLATPPGQKI
                     VSILLLEDLAIVPLLAVVALLAPSIKDAADATPVWLSILVALGCVAALQFIGRWVLNP
                     LFRILANAQAREVMTAAALLVVLGAAMLFQFGGLSMAMGAFLAGVLLSTSTFRHQLEA
                     DIEPFRGILLGLFFLAVGMSLDLNIVARDWQIIAISVVCYMAVKGGAIFVLARLLKSS
                     VADALERALLMAQGGEFAFVLYTTAAAAGLISADQQAIFSATVIISMVLTPLTIQALR
                     LVPAPGQSMEGVEEPDGLSGDVLVIGFGRFGQIASQALLAKGHKLSLIDTDTEMIRVA
                     AQFGAKVYYGDGTRLDILRAAGIEQVDVVIIAVDRRDDAVKIAELLHAEYPLIKVMAR
                     AFDRGHAIALVKAGVEFQIREVFESALSLSGETLKVLGSTDEEIAELIQGVRDRDRQR
                     FAAQIVGGIGAARDLLLSNAEEQARESGAVSGPSEPVMLEKPPDKPSEPAAS"
     gene            3983..6460
                     /locus_tag="VHZ56_00430"
     CDS             3983..6460
                     /locus_tag="VHZ56_00430"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan phosphorylase"
                     /protein_id="HEX4296465.1"
                     /translation="MPQKPIVLDAPIPEKRARTAEALQDEILEKLTYAVGKDAIVARP
                     HDWLNATILAIRDRVIDRWFESSRVTWRTSEKRVYYLSLEFLIGRLMRDAMSNIGIME
                     PVRQALRNLNVDLGDLINLEPDAALGNGGLGRLAACFMDSMATLGIPAYGYGIRYANG
                     MFRQEMSEGWQVELPEDWLAHGNPWEFERRESSYEIGFGGQVVPVQEPDGSTRLEWRP
                     AEHFLAVAFDTPIVGWRGARVNTLRLWSAQPVDPIFLDKFNSGDHIGALEESSRAEVI
                     TRVLYPADSTPSGQELRLRQEYFFSSASLQDIVRRHMQQYGEIGSLPDKVAIQLNDTH
                     PAISIAELMRILIDVHGIKWAQAWPLVKGTFGYTNHTLLPEALETWPVALLERLLPRQ
                     MQIIYAINAEVLAEARTRLQFNDQQIANVSLIDEGGNRRVRMGQLAFVGSHSINGVSA
                     LHTELMKKTIFADLNKLYPDRINNKTNGVTPRRWLLECNPGLTRLISERIGPEFQDNV
                     DLLVQLDKHADDPNFQEQFAAVKLANKVRLAEVIKDRLNFVVAPDALFDVQVKRIHEY
                     KRQLLNVIEAVSQYQAIKSHPEVDWVPRVKVFAGKAAPSYWNAKLVIKLINDVAKVIN
                     NDPSVRELLKVVFLPNYNVSLAEIIMPAADLSEQISTAGLEASGTGNMKFALNGAVTI
                     GTLDGANIEMLDAVGKDNMVIFGLTAEEVTQKRARTEVPRSAIDASPALREVLEMISS
                     GVFSPDDPNRYRDLIGGLYDHDWFMVARDFDAYAAAQRQVDSLWQAPRKWHAMAIRNT
                     AHMSWFSSDRTIRQYAGEIWNVTAAQG"
     gene            6472..8661
                     /gene="glgB"
                     /locus_tag="VHZ56_00435"
     CDS             6472..8661
                     /gene="glgB"
                     /locus_tag="VHZ56_00435"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003844 - 1,4-alpha-glucan branching
                     enzyme activity [Evidence IEA];
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HEX4296466.1"
                     /translation="MADWQADPADVEAIVTGQHADPFAVLGLQQAGGSWVARAFVPHA
                     EKVSAFTRDGRPLGDLVRRHDDGFFEGRIDVDRRQPIRYRAANAGGEWDVFDPYSFGP
                     VLGPMDDYYIGEGTHLRLFDKLGAHAIEFEGVNGVHFAVWAPNARRVSVVGAFNDWDG
                     RRHPMRNRFETGVWEVFIPAIGPGTIYKYEIVGPDGALLPLKADPFARQSELRPKTAS
                     IVADPTPFNWTDGKYIEARGKKDWRRAPISIYEVHLGSWRKRADGSFMSYQQLAEQLI
                     PYAKDMGFTHIELLPISEHPFDPSWGYQPTGLYSPTARFGDPAGFKLFVDQAHKAGLG
                     VILDWVPAHFPTDEHGLARFDGTALYEHADPRQGYHPDWNTAIYNFGRKEVSAFLTNN
                     ALYWFEMFHIDGLRVDAVASMLYLDYSRQPGEWVPNKFGGNHNLEAVAFLQRVNAEVY
                     RQHPGALMIAEESTAWSGVSAPAYTGGLGFGFKWNMGFMNDTLRYMERSPIHRRYHHN
                     DMTFAALYAFSENYVLPLSHDEVVHGKLSLINKMSGDDWQQFAALRAYYAYMWGWPGK
                     KLLFMGQEFAQREEWSEAKGLDWWLLDAGMHEGVRRLIIDLNSAYRELPALHGRDCEP
                     DGFEWLIGNDQANSVFAWMRKSNGSSPAVVISNMTPVPRDNYRVPMPKEGQWSERVNT
                     DAGWYGGSNTGNQGKVVAHPLEGQWMPAYAELYLPPLATLILKYDPD"
     gene            8683..9954
                     /gene="glgC"
                     /locus_tag="VHZ56_00440"
     CDS             8683..9954
                     /gene="glgC"
                     /locus_tag="VHZ56_00440"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008878 - glucose-1-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HEX4296467.1"
                     /translation="MADYRTPSPLAREAMAYVLAGGRGTRLYDLTDRRAKPAVYFGGK
                     SRIIDFALSNALNSGIRRISVATQYQAHSLIRHLQRGWNFLRTERNESFDVLPASQRV
                     SETQWYEGTADAVYQNMDIIEDYGPRYIVLLAGDHIYKMDYEIMLRQHVDTGADVTIG
                     CLEVPRMEATGFGVMHVDTRDRVVEFVEKPKDPPGIPDNPDYALASMGIYVFETRFLM
                     EQLRRDAATEGSNRDFGKDIIPYIVKNGSAWAHRFPRSCVRSPNEEVAYWRDVGTIDA
                     YWKANIDLTDVNPQLDLYDRDWPIWTFAEITPPAKFVHDFEGRRGSAVNSLVSGDCII
                     SGGSLERTLLSTGSRVHSYSQLHEAVVLPYCTINRGARLRKVVVDRGVVIPEGLVVGE
                     DPEFDNRWFRRTDDGVTLITQPMLDKFQAGK"
     gene            9954..11417
                     /gene="glgA"
                     /locus_tag="VHZ56_00445"
     CDS             9954..11417
                     /gene="glgA"
                     /locus_tag="VHZ56_00445"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004373 - glycogen (starch) synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HEX4296468.1"
                     /translation="MDVISVASEAYPLIKTGGLADVTGALPGALAGHDVSVRTLLPGY
                     PAVLGAIENVQTLAAYPDFFGGPAELLSGRAKGLEIIAIKADHLFERAGNPYLGPDRK
                     DWPDNWRRFAALSFAAYELGRGAIDGIAPDILHCHDWQAGLTPAYVRFNGAAKVKTIQ
                     TVHNIAFQGLFGWEIFNELNLDYRAARESAIEYYGLINYLKAGLQVADALTTVSPTYA
                     LEIKSHEYGMGLEGILQARADVLVGITNGIDDHEWDPQLDTALHTRFGHNSTELRHGN
                     RRALELRFDLDDSAGPMFSVVSRLTRQKGLDMLVGLVDDLVAAGGKLVVLGSGDGDLE
                     DGFAGAAMRHPGKVGFVRAYDEALSHLMQGGADVMVVPSRFEPCGLTQLYGLRYGCVP
                     LVSRVGGLADTVIDANEAAVEAGVATGIVFAPATVEALREAIHRAIRLYGRDKVWRKM
                     QRRGMKSDVSWELSAAKYAKLYRQLLGVRNDDDNADS"
     gene            11395..13029
                     /locus_tag="VHZ56_00450"
     CDS             11395..13029
                     /locus_tag="VHZ56_00450"
                     /EC_number="5.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016650859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016868 - intramolecular
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-glucose phosphate-specific
                     phosphoglucomutase"
                     /protein_id="HEX4296469.1"
                     /translation="MTTTRTVSTTPFADQKPGTSGLRKRTRAFMVPNYVENFVQSVID
                     CLEGFKGKTLVIGGDGRYHNDVAIQAIIRIASGNGFGKVLVGQGGLLSTPGTSHVIRH
                     YKAFGGFILSASHNPGGIEGDFGIKYNIGNGGPAPESVTDAVFARSKGLERYLSVDAP
                     DIDLGSIGTQQCGDMVVEVIDPVTDYAALMQTLFDFPLIANMFAAGFTMRFDALHAIT
                     GPYAHRIFEDMLGAPSGTVLNGTPLPDFGGGHPDPNLVYCKDLYDLMMGPDAPDFAAA
                     SDGDGDRNLIIGRKRYVTPSDSLALLAANAPLAPAYANGLAGVARSMPTSAAADRVAE
                     KLGIGMYETPTGWKFFGNLLDAGKVTICGEESSGTGSNHVREKDGIWAVLLWLNILAA
                     RKQGVDEIVRDHWALYGRNYYTRHDYEEVDAAVANKLMDDLRGQLPAIADATYDSLKV
                     SFADDFTYQDPVDGSVSGRQGIRIGFADGSRIVFRLSGTGTVGATLRLYLERYEPAHG
                     QHDLDTQSALSFLISLADRIGGIRERTGRDAPSVIT"
     gene            13046..>14049
                     /locus_tag="VHZ56_00455"
     CDS             13046..>14049
                     /locus_tag="VHZ56_00455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HEX4296470.1"
                     /translation="MTKPQLVPRGGSAEKLGATVGADGINFAVYSETASALYVSLYDE
                     ADREIERIELDGHDDNIHHGLIAGIGPGARYGLRADGPYDPDQGLHFDPNKLLVDPYA
                     RRLDRTFVRSPRLRLPRSEAEDTAPLVPKAIVVSPQLNKHAVPRRKAPSLMYELNVRG
                     YTMRHPSVQGPLRGTIAGLTTRRIIDHLKYLGVDCVELMPIAAFIDDGHLPALGLTNA
                     WGYNPVTYFAIDPRLAPRGPQSLRFLTDLYRKNGISVILDVVYNHTGEGDNMGPVLSL
                     KGLDARAYYRHVEVDGKQVLVNDAGTGNTLRCDHPATQRLVIDSLRYWVAEMGVSGFR
                     "
BASE COUNT         2330 a         4544 c         4813 g         2362 t
ORIGIN      
        1 ttgccaagcg cgcggaagcg ggcaacccgg gtcttggtcg agagcatgaa gtgggtgacg
       61 tcgagcggca ccacggtgat cgggatgccg gagtggaaga cgacatcggc ggcctccggg
      121 tcgacataga tgttgaactc ggccgccggg gtgatgttgc cgccctcgaa caggccgccg
      181 cccatcagca cgatctcctg gacccgcggc atgatgtcgg gcgccttgac gaaggccatg
      241 ccgaggttgg tcagcgggcc gagcgcgcag agcgtcaccg tgccggctgg ctcgcgacgg
      301 agggtatcga tgatgaagtc gacgccatgc tgctcgcgca gcgtgatccg ggggtcgggc
      361 agggtagggc cgtcgatccc ggtcttgccg tggacgtact cggcggtcac gagcttccgc
      421 cgcattggcc gctcgcatcc ggcatagacc ggggtgtcgg tccgccccga cagctccacc
      481 accttcaacg cattctgggc gttctgggtg agcccgacat tgccggcgac ggcgacgatg
      541 ccgaggacct cgatctcggc cggcgagccc agcgcgagga ggatggcgac ggcgtcgtcc
      601 tggcccgggt cggtgtcgat aatgatcttg cggcgcatgg gggttggcct tcttggttcg
      661 cgcgttgagt caggcgcgga gcataatgcg gcggcgccgg ctgcgacagc ggaacagttg
      721 gggccgccgg cgcgttcaag cgcggaggga atccgcttgc gtcagccaca caccatccgc
      781 cgttccgcca ggctcgaccg ggatctggca aacacccgct tcgagcgcat tctcggcaac
      841 gcgtcgcagt tggcgatcgt ctttgtcggc tgcgtgctgg gcctggtgac gatccagtcg
      901 gcgcagttca tcctcgcccc catctttctc gcaatcatca ttgggctgat gagcggtccg
      961 attgccgacg ccatggagcg gcgcggggtg ccgacgccgc tttcggcggc ggtggtggtg
     1021 ctcgtcctcg tggcggtgat cgccgccgcg gtgtttgcgt tctcgggccc cctttcggtc
     1081 tgggtgcagc gggcccccgc gatctgggac aagctcaaga acgaggtcgc cagctggaaa
     1141 ggcgcgatcg acgccgtcgg cgccatccag acgcagctgc agtcgatctt cggcggcggc
     1201 tcggcggtcg aggtcaaggt gcaggacggc ggcccgatca ccgacatcgc gttcctcgcg
     1261 ccggtggcac tcgggcaggt gctgatcttc ctcggcgggc tgtatttctt cctcgcggcg
     1321 cgcgacgcca tccgcatcgg cgtgctgtcg ctctgcttca cccgcaaggt gcgctggcgg
     1381 accgcccacg tgttccgcga cgtcgagacg cgcgtgtcgc gctacttgct gaccatcacc
     1441 ttggtcaaca tctgcctgag ctcgctggtg gcgctggcga tgtggatcgt cggcatgccg
     1501 tcgccgctgc tgttcggagc gctggccttc gtcctcaact acattccgtt catcggccag
     1561 gcgacgatgc tggcgctgat cttcctcatc gggctgggca ctcgcgacgg gctgacctcg
     1621 gcgctgctgc cggtcgcctg ctactgggga ctgagcttcc tcgagagcca ggtggtgacg
     1681 ccgaacctgc tgggacggac gatgacgatc aatccgttcc tgatcttcct gtcgctgacc
     1741 ttctggctgt gggcctgggg gccggtcggc ggactggtgg cggtgccgtc ggtgctggtc
     1801 ctccactcgg tgatcacgca catcatcccg acccgctcgg tcgtcccggc ccgggtgcgg
     1861 cgcaagatcg atcgcaaggc gacggccgat acccgggagg ccgagcccga ccgggtgccg
     1921 ccggcgccca ccgcaaccga gctcaaaccg cagcgtacag ccaaggccgc cgtcgcgccg
     1981 tcgccttgac gccgcgcggc gggacccgca tgtctagccc ctgatcccgg gggacaaatg
     2041 gcaggcgagg cggtcaacca ggcggcgaca gtcgtcagca atatcgacct gatgcaggtg
     2101 ctggcgctgc tggccgctgg cgtcattgcc gtccccatct tcaagcgcgc cgggctcggc
     2161 tcggtcctcg gatacctcgc ggcggggctg gtcatcggcc ccttcggact gcggctgatc
     2221 gccgatcccg agtcggtgct gcgcgtctcc gaactgggtg tcgtgctgtt cctgttcatc
     2281 gtcgggctcg agatggaacc gagccggctg tggagcctgc gcaagcagat tttcgggctc
     2341 ggcgtcatcc aggtggcgat ctgcggcgcg ctgctcaccg gcgtaggagt ggtgctcggc
     2401 ctgccgccgg tggtggcgtt cgttgccggc atggggttcg tgctgacctc caccgccatc
     2461 gtcatgcagc tgctcaccga gcgcggcgat ctggcgacgc cgcccggcca gaagatcgtc
     2521 tcgatcctcc tgctcgagga cctcgcgatc gtgccgttgc tggcggtggt ggcgctgctg
     2581 gcgccgtcga tcaaggacgc ggcggacgca acgccggtgt ggctgtcgat cctcgttgcc
     2641 ctcggctgcg tggcggcact gcagttcatc ggccgctggg tgctcaatcc gctgttccgg
     2701 atcctcgcca acgcccaggc ccgcgaggtg atgacggcgg cggcgctgct ggtcgtgctg
     2761 ggcgcggcga tgctgttcca gttcggcggc ctgagcatgg cgatgggggc gttcctcgcc
     2821 ggggtgctgc tctcgacgtc gacgttccgg catcagctcg aggccgatat cgagccgttc
     2881 cgcggcatcc tcctggggct gttcttcctc gccgtcggca tgtcgctcga cctcaacatc
     2941 gtggcgcgcg actggcagat catcgccatc agcgtggtct gctacatggc ggtcaagggc
     3001 ggggcgatct tcgtcctggc gcggctgctc aagtcgagcg tcgccgatgc gctggagcgg
     3061 gcgttgctga tggcgcaggg cggcgagttt gccttcgtgc tctacaccac cgccgccgcg
     3121 gccgggctga tcagcgccga ccagcaggcg atcttttcgg cgacggtgat catctcgatg
     3181 gtgctgacgc cgctgaccat ccaggcgctg cggctggtgc cggcgccggg gcagtcgatg
     3241 gagggcgtcg aggagccgga cgggctcagc ggcgacgtcc tggtgatcgg cttcggccgc
     3301 ttcgggcaga tcgccagcca ggcgctgctc gccaaggggc acaagctgtc gctgatcgac
     3361 accgataccg agatgatccg cgtcgccgcg cagttcggtg ccaaggtcta ttacggcgac
     3421 ggcacccgcc tcgacatcct gcgtgcggcg ggcatcgagc aggtggacgt ggtgatcatc
     3481 gccgtcgaca ggcgcgacga tgccgtcaag atcgccgagc ttctgcatgc cgagtacccg
     3541 ttgatcaagg tgatggcccg ggccttcgac cgcggccacg ccatcgcgct ggtcaaggcc
     3601 ggagtcgagt tccagattcg cgaggtcttc gaatccgcgc tgtcgctttc gggtgagacc
     3661 ctgaaagtgc tcgggtcgac cgacgaggag atcgccgagc tgatccaggg ggtgcgcgac
     3721 cgcgaccggc agcgcttcgc agcgcagatc gtgggcggca tcggtgccgc gcgcgacctg
     3781 ttgctctcca atgccgagga gcaggcgcgc gagagcggcg cggtcagcgg cccgtcggag
     3841 cccgttatgc tggaaaagcc gcccgacaag ccgtcggagc cggcagccag ctagccgctc
     3901 gcggggcttc caagcgccct aaatagatgc aatgcttggg cttctagagg ggactacatc
     3961 gtcatgctga caggattgcg agatgccgca aaagcctatc gtattggacg ccccgatccc
     4021 ggagaagcgc gcccgcacgg ctgaggcact gcaggacgaa atcctcgaaa aactgactta
     4081 tgcggtgggc aaggacgcca tcgtcgcgcg cccgcacgac tggctgaatg cgacgatcct
     4141 cgccatccgc gaccgggtga tcgaccgctg gttcgaatcg agccgggtaa cctggcggac
     4201 ctcggaaaag cgggtctatt acctcagtct cgaatttctc atcggccgcc tgatgcggga
     4261 cgcgatgtcg aatatcggca tcatggagcc ggtccggcag gcgctgagga acctcaatgt
     4321 cgacctcggc gacctgatca acctcgagcc tgacgcagct ttgggcaatg gcggtctcgg
     4381 gcggctggcg gcctgcttca tggattcgat ggcgacgctg ggcatcccgg cctacggcta
     4441 cggcatccgc tacgccaacg gcatgttccg gcaggaaatg agcgagggct ggcaggtcga
     4501 gctgccggag gactggctgg cgcacggcaa tccgtgggaa ttcgagcgcc gggagtcgag
     4561 ctacgagatc ggcttcggcg gccaggtggt accggtgcag gagccggatg gctcgacgcg
     4621 gctggaatgg cggccggcgg agcattttct cgccgtggcg ttcgacacgc cgatcgtcgg
     4681 ctggcgcggg gctcgggtga acacgctgag gctgtggagc gcccagccgg tcgatccgat
     4741 ctttctcgac aagttcaatt cgggcgatca catcggggcg ctcgaggaga gctcgcgggc
     4801 cgaggtgatc acccgggtgc tctatccggc ggactccacg ccatcggggc aggaactgcg
     4861 gctgcggcag gagtatttct tctcgtcggc ctcgctgcag gacatcgtgc gccggcacat
     4921 gcagcaatat ggcgagatcg gctcgctgcc cgacaaggtc gcgatccagc tcaacgacac
     4981 gcacccggcc atctcgatcg ccgagctgat gcgcatcctc atcgatgtgc acggcatcaa
     5041 gtgggcgcag gcgtggccgc tggtgaaggg caccttcggc tacaccaacc acacgctgct
     5101 gccggaggcc ctggaaacct ggccggtggc gctgctcgag cggctgctgc cgcggcagat
     5161 gcagatcatc tacgccatca atgccgaggt gctggcggaa gcccgcacgc ggctgcagtt
     5221 caacgaccag cagatcgcca acgtgtcgct gatcgacgag ggcggcaacc gccgggtgcg
     5281 gatgggccag ctggcgtttg tcggcagcca ctcgatcaat ggcgtgtcgg cgctgcacac
     5341 cgagctgatg aagaagacga tcttcgccga cctcaacaag ctctaccccg accgcatcaa
     5401 caacaagacc aacggggtca cgccgcggcg ctggctgctc gaatgcaatc cagggttgac
     5461 gcggctgatc agcgagcgga tcggaccgga gttccaggac aatgtcgacc tgctggtgca
     5521 gctcgacaag catgccgacg atccgaactt ccaggagcag ttcgcggcgg tgaagctggc
     5581 caacaaggta cggctggcgg aagtcatcaa ggaccggctc aatttcgtgg tcgcgccgga
     5641 cgcgctgttc gacgtgcagg tgaagcgcat ccacgagtac aagcggcagc tgctcaacgt
     5701 catcgaggcg gtgtcccagt accaggcgat caagtcgcac ccggaggtcg actgggtgcc
     5761 gcgggtcaag gtgttcgccg gcaaggcggc tccgagctac tggaacgcca agctcgtcat
     5821 caagctcatc aacgacgtcg ccaaggtgat caacaacgat ccgtcggtgc gcgagctgct
     5881 gaaggtggtg ttcctgccca actacaacgt gtcgctggcc gagatcatca tgccggcggc
     5941 agacctgtcg gaacaaatct ccaccgccgg gcttgaggct tccggcaccg gcaacatgaa
     6001 gttcgccctc aacggggcgg tcacgatcgg cacgctggac ggcgccaaca tcgagatgct
     6061 ggacgcggtc ggcaaggaca acatggtgat tttcggtctc accgccgagg aggtgacgca
     6121 gaagcgcgcc cgcaccgagg tgccgcgcag cgccatcgat gcatcgccgg cgctgcgcga
     6181 ggtgctggag atgatctcgt cgggcgtgtt ctcgccggac gatccgaacc gttatcgcga
     6241 tctcatcggc gggctttacg accacgactg gttcatggtg gcgcgcgact tcgacgccta
     6301 tgcggcggcg cagcgacagg tcgacagcct gtggcaggcg ccgcgcaaat ggcatgcgat
     6361 ggcgatccgg aacaccgcgc atatgagctg gttctcgtcg gatcgcacca tccggcaata
     6421 tgccggggag atctggaacg taacggcggc gcagggctag gggcggcgga gttggcagac
     6481 tggcaggcag atccggcaga cgtagaggcc atcgttacgg gccagcacgc ggacccgttc
     6541 gccgtgctcg gcctgcagca ggcgggtggc agctgggtgg cccgtgcctt cgttccccac
     6601 gccgagaagg tttccgcctt cacccgcgac ggccggccgc tgggcgatct ggtgcgccgc
     6661 catgacgacg ggttcttcga ggggcggatc gatgtcgacc gccgccagcc gatccgctac
     6721 cgcgctgcca atgccggcgg cgagtgggat gtgttcgatc cctacagctt cggaccggta
     6781 ttgggcccga tggacgacta ctacatcggc gagggcacgc acctcaggct gttcgacaag
     6841 ctgggcgcgc atgccatcga gttcgagggc gtcaatggcg tccacttcgc cgtctgggcg
     6901 ccgaacgccc gccgggtctc ggtggtgggc gcattcaacg actgggacgg ccgtcggcac
     6961 ccgatgcgca accgcttcga gaccggcgtg tgggaggtgt tcatcccggc gatcgggccg
     7021 ggcaccatct acaagtacga gatcgtcggg cccgacggag ccctgctgcc gctgaaggcc
     7081 gacccgttcg cgcggcagtc ggagctgagg ccgaagacgg cgtcgatcgt cgccgatccg
     7141 acgccgttca actggaccga cggcaagtac atcgaggcgc gcggcaagaa ggactggcgg
     7201 cgcgcgccga tctccatcta cgaggtgcac ctggggtcgt ggcgcaagcg cgccgacggc
     7261 agcttcatga gctaccagca gctggccgag cagctcatcc cctatgccaa ggacatggga
     7321 ttcacccata tcgagctgct gccgatctcc gaacatccgt tcgatccgag ctggggctac
     7381 cagccgacgg gcctctattc gccgaccgcc cggttcggcg atccggccgg gttcaagctg
     7441 ttcgtcgacc aggcgcacaa ggccgggctc ggggtgatcc tcgactgggt gccggcgcat
     7501 ttcccgaccg acgagcacgg gctcgcccgc ttcgacggaa cggcgctcta cgagcatgcc
     7561 gatccgcggc aggggtatca tccggactgg aacacggcga tctacaattt cggccgcaag
     7621 gaagtgtcgg cgttcctcac caacaacgcc ctctactggt tcgagatgtt ccacatcgac
     7681 gggctgcggg tggatgccgt ggcctcgatg ctctatctcg actattcgcg gcagccgggc
     7741 gagtgggtac ccaacaagtt cggcggcaac cacaacctcg aggccgtggc gttcctgcag
     7801 cgggtcaatg ccgaggtcta tcggcagcat ccgggggcgc tgatgatcgc cgaggagtcg
     7861 acggcgtgga gcggggtgtc ggcgcccgcc tacaccggcg ggctcgggtt cggcttcaag
     7921 tggaacatgg ggttcatgaa cgacacgctg cgctacatgg agcgcagccc catccaccgg
     7981 cgctatcacc acaacgacat gacgttcgcg gcgctctacg cgttcagcga gaactacgtg
     8041 ctgccgctca gccacgacga ggtggtgcat ggcaagctgt cgctgatcaa caagatgagc
     8101 ggcgacgact ggcagcagtt cgcggcgttg cgggcctact acgcctacat gtggggctgg
     8161 ccgggcaaga agctgctgtt catgggccag gagttcgcgc agcgcgagga atggagcgag
     8221 gccaagggac tcgactggtg gctgctcgat gccggcatgc atgagggcgt ccgccggctg
     8281 atcatcgacc tcaactcggc ctaccgcgag ttgccggcgc tgcacgggcg cgattgcgag
     8341 ccggacggct tcgaatggct catcggcaac gaccaggcca attcggtgtt tgcctggatg
     8401 cgcaagtcga acggctccag cccggcagtc gtcatttcca acatgacgcc ggtgccgcgt
     8461 gacaattacc gggtgccgat gcccaaggaa ggccagtgga gcgagcgggt gaacaccgat
     8521 gccggctggt acggcggcag caacaccggc aaccagggca aggtcgtcgc gcatccgctc
     8581 gaggggcaat ggatgccggc ctatgcggag ctctatttgc cgccgctggc gactttgatt
     8641 ttgaaatacg acccggattg attcgggcgc gaggagggag acatggcaga ctatcggaca
     8701 ccatcgccgc tggcacgcga ggcgatggcc tacgtgctcg cggggggacg cggcacgcgg
     8761 ctttatgacc tgaccgatcg gcgcgccaag ccggcggtct atttcggcgg caagtcccgc
     8821 atcatcgact tcgcgctgag caatgcgctc aactccggca tccgccgcat ctcggtggcg
     8881 acgcagtacc aggcgcactc gctgatccgg cacctgcagc gcggctggaa cttcctgcgc
     8941 accgagcgca acgagagctt cgacgtgctg ccggcgagcc agcgcgtcag cgagacacag
     9001 tggtacgagg gcaccgccga cgccgtgtac cagaacatgg acatcatcga ggattacggg
     9061 ccgcgctaca tcgtgctgct ggcgggcgac cacatctaca agatggacta cgagatcatg
     9121 ctgcgccagc atgtcgacac cggtgccgat gtcaccatcg gctgcctcga ggtgccgcgc
     9181 atggaggcga cgggcttcgg cgtgatgcat gtcgacaccc gcgaccgggt cgtcgagttc
     9241 gtcgagaagc cgaaggatcc gccgggcatt cccgacaatc cggattatgc gctcgcctcg
     9301 atgggcatct acgtcttcga gacgcggttc ctgatggagc agttgcgccg cgacgcggcg
     9361 accgagggct cgaaccgcga cttcggcaag gacatcatcc cctacatcgt caagaacggc
     9421 tcggcctggg cgcatcgctt cccgcgctcc tgcgtccgtt cgccgaacga ggaggtggcg
     9481 tactggcgcg acgtcggcac catcgatgct tactggaaag ccaacatcga cctcaccgac
     9541 gtcaacccgc agctcgacct ctacgaccgc gactggccga tctggacctt tgccgagatc
     9601 acgccgccgg ccaagttcgt gcacgatttc gagggccggc gcggctcggc ggtcaactcg
     9661 ctggtgtcgg gggactgcat catctcgggc ggctcgctgg agcgcacgct gctgtcgacg
     9721 ggctcgcgcg tccattccta ctcgcagctg cacgaggcgg tggtgctgcc ctattgcacg
     9781 atcaaccgcg gggcgcggct gcggaaagtc gtcgtcgacc gcggcgtggt gatccccgag
     9841 gggctggtcg tcggcgagga tccggagttc gacaaccgct ggttccggcg gacggacgat
     9901 ggggtgacgc tgatcaccca gccgatgctc gacaagttcc aggccgggaa atgatcgatg
     9961 tcatttcggt cgcctcggaa gcctacccgc tgatcaagac gggcgggctt gccgacgtga
    10021 ccggtgcgct gcccggcgcg ctcgccggcc acgacgtgag cgtgcgcacc ctgctgccgg
    10081 gctatccggc ggtactcggg gcgatcgaga atgtgcagac cctcgcggcg tacccggact
    10141 ttttcggcgg cccggccgag ctgctgagcg gacgcgccaa ggggctcgag atcatcgcga
    10201 tcaaggccga ccacctgttc gagcgggcgg gcaatccgta cctcgggccc gaccgcaagg
    10261 actggccgga caactggcgg cggttcgcgg cgctgagctt tgccgcctac gagctggggc
    10321 gcggcgcgat cgacgggatc gcccccgaca tcctccactg ccacgactgg caggccggac
    10381 tgacaccggc ctatgtgcgg ttcaacggcg cggcgaaggt caagaccatc cagaccgtgc
    10441 acaacatcgc cttccagggg ttgttcgggt gggaaatctt caatgagctg aacctcgact
    10501 accgggcggc gcgcgaaagc gcgatcgagt attacggcct catcaattac ctgaaggccg
    10561 gcctgcaggt cgccgacgcg ctgaccacgg tgagccccac ctatgccctc gagatcaagt
    10621 cgcacgagta cggcatgggg ctcgagggca tcctgcaggc gcgcgccgac gtactggtcg
    10681 gcatcaccaa cggcatcgac gatcacgagt gggatccgca gctcgatacg gcgctgcaca
    10741 cgcgcttcgg gcacaacagc accgagctcc ggcatggcaa ccggcgggcg ctggagctgc
    10801 ggttcgacct cgacgattcg gccggaccga tgttctcggt ggtcagccgg ctgacgcggc
    10861 agaagggcct cgacatgctg gtcgggctgg tcgacgatct ggtcgcggcc ggcggcaagc
    10921 tggtcgtgct cggctccggc gacggcgatc tcgaggacgg cttcgccggg gcggcgatgc
    10981 ggcatccggg caaggtcggc ttcgtgcgtg cctatgacga ggcgctgagc catctgatgc
    11041 agggcggtgc cgacgtgatg gtggtgccgt cgcgcttcga gccctgcggc ctgacgcaac
    11101 tgtacggact gcgctatggc tgcgtgccgc tggtcagccg cgtcggcggg ctggcggaca
    11161 cggtgatcga cgccaacgag gcggcggtgg aggccggggt cgcgactgga atcgtgttcg
    11221 cgccggcgac ggtcgaggcg ctgcgcgagg cgatccatcg ggccatccgg ctctatgggc
    11281 gcgacaaggt gtggcgcaag atgcagcgcc gggggatgaa gtcggatgtc agctgggagc
    11341 tcagtgcggc aaaatacgcc aagctctatc ggcagctgct gggggtgagg aacgatgacg
    11401 acaacgcgga cagttagcac cacgccgttt gccgaccaga agccgggcac gtcgggactg
    11461 cgcaagcgca cccgtgcctt catggtgccg aactacgtcg agaatttcgt gcagtcggtg
    11521 atcgactgcc tcgaggggtt caagggcaag acgctggtga tcggcggcga tggccgttac
    11581 cacaatgacg tcgccatcca ggcgatcatc cgcatcgcct cgggcaatgg cttcggcaag
    11641 gtgctggtgg ggcagggggg actgctgtcg acgcccggca cctcgcatgt catccgccac
    11701 tacaaggcgt tcggcggctt catcctctcg gccagccaca acccgggcgg catcgaggga
    11761 gatttcggca tcaagtataa tatcggcaat ggcggcccgg cgccggagtc ggtgaccgac
    11821 gcggtgttcg cgcgctcgaa ggggctcgag cgctacctta gcgtcgatgc acccgacatc
    11881 gatctcggat cgatcggcac gcagcaatgc ggcgacatgg tcgtggaggt gatcgacccg
    11941 gtcaccgact acgcggcgct gatgcagacg ctgttcgatt ttccgctgat cgccaacatg
    12001 ttcgccgccg gcttcacgat gcggttcgat gcgctgcacg cgatcaccgg tccctacgcg
    12061 caccgcatct tcgaggacat gctgggagcg ccctcgggga cggtgctcaa cggcacgccg
    12121 ctgcccgatt tcggcggcgg ccatcccgat ccgaacctcg tctactgcaa ggacctctac
    12181 gacctgatga tggggccgga cgcgccggat ttcgccgccg cgtcggatgg cgacggcgac
    12241 cgcaatctga tcatcgggcg gaagcgctac gtgacgccgt cggactcgct ggcgctgctc
    12301 gcggccaacg cgccgctggc gccggcctac gccaacggcc tcgccggcgt ggcgcgctcg
    12361 atgccgacca gtgccgcggc cgaccgggtt gccgagaagc tcggcatcgg catgtacgaa
    12421 acgccgaccg gctggaagtt cttcggcaat ctgctcgatg ccggcaaggt cacgatctgc
    12481 ggcgaggaga gttcgggcac cggctcgaac cacgttcgcg agaaggacgg catctgggcc
    12541 gtgctgctgt ggctcaatat ccttgcggcc cgcaagcagg gggtcgacga gatcgtgcgc
    12601 gatcactggg ccctctatgg gcgcaactac tacacccggc acgactacga ggaggtcgac
    12661 gcggccgtcg ccaacaagct gatggacgac ctccgcggcc aattgcccgc catcgccgat
    12721 gcaacctatg acagcctcaa ggtttcattt gccgacgact tcacctacca ggacccggtc
    12781 gacgggtcgg tgagcggccg ccagggcatc cgcatcggct ttgcggatgg cagccgcata
    12841 gtgttccggc tcagtggaac ggggaccgtc ggggcgacgt taaggctcta cctcgaaagg
    12901 tatgaaccgg cccatggaca gcacgacctc gacactcaat ccgcactctc cttcctcatc
    12961 tccctcgccg accggatcgg cggtattcga gagcgcaccg gccgagacgc ccccagcgtc
    13021 atcacctgag ccgggaatcg gcggggtgac caaaccacag ctcgtgccgc gcggcggaag
    13081 cgcagagaag ctgggcgcaa cggttggcgc cgacgggatc aattttgccg tctattccga
    13141 aactgcgtcg gcgctgtacg tgtcgctcta cgacgaagcc gatcgcgaga tcgagcggat
    13201 cgagctcgac gggcacgacg acaacatcca tcacgggctg atcgccggta tcgggcccgg
    13261 cgcgcgctac gggctgcgcg ccgacgggcc atacgatccg gaccagggac tccacttcga
    13321 ccccaacaag ctgttggtcg atccctatgc gcggcggctg gaccgcacct tcgtgcgctc
    13381 gcctcgcctg cggctgccgc gttcggaagc cgaggacacc gcgccgctgg tgcccaaggc
    13441 gatcgtcgtg tcgccgcagc tcaacaagca tgccgtgccg cgccgcaagg cgccgagcct
    13501 gatgtacgag ctcaatgtgc gtggctacac catgcgccat ccgagcgtgc aggggccgtt
    13561 gcgcggcacc atcgccggcc tcaccacgag gcgcatcatc gaccacctga agtacctcgg
    13621 tgtcgactgc gtggagctga tgccgatcgc ggcgttcatc gacgacggcc acttgccggc
    13681 gctcggcctc accaacgcct gggggtacaa ccccgtgacc tatttcgcca tcgatccgcg
    13741 gctggcgccg cgcggccccc agtcgctgcg cttcctgacc gacctgtatc gcaagaacgg
    13801 catttcagtc atcctcgacg tggtctacaa ccacaccggc gagggcgaca acatggggcc
    13861 ggtgctgagc ctcaaggggc tcgacgcccg cgcctactac cggcacgtcg aagtcgacgg
    13921 caagcaggtg ctggtcaacg acgccggcac cggcaacacg ctgcgctgcg accatccggc
    13981 aacgcagcgc ctggtcatcg acagcctgcg ctactgggtc gcggagatgg gcgtctccgg
    14041 cttccgttt
//
LOCUS       DATAZA010000019         2271 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_349355, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000019 DATAZA010000000
VERSION     DATAZA010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2271
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349355"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..291)
                     /locus_tag="VHZ56_00460"
     CDS             complement(<1..291)
                     /locus_tag="VHZ56_00460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015887094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine kinase"
                     /protein_id="HEX4296471.1"
                     /translation="MADTQFDVLTIGNAIVDVIAPIDPAFLVREGLTEGIMHLVDAER
                     SASLYERMPADKRQISGGSAANTAAGVAGFGGRTAFVGKVAADPLGDVFADDL"
     gene            complement(435..1112)
                     /gene="nth"
                     /locus_tag="VHZ56_00465"
     CDS             complement(435..1112)
                     /gene="nth"
                     /locus_tag="VHZ56_00465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEX4296472.1"
                     /translation="MAKASASRSTKRLTREEVEAVFAAFQKANPEPKGELVAPNAFTL
                     LVAVVLSAQATDAGVNRATPALFGLADTPAKMVGLGVERITELVKTIGLYRNKAKNVF
                     ALSQILVEKFGGEVPADREALESLPGVGRKTANVVLNMAFGEATMAVDTHVFRVSNRT
                     GLAPGKDPLEVELKLLKVVPKQYLLHAHHWLILHGRYVCIARKPECYRCIIAEWCRFE
                     PKTPPPA"
     gene            1149..1628
                     /locus_tag="VHZ56_00470"
     CDS             1149..1628
                     /locus_tag="VHZ56_00470"
                     /inference="COORDINATES: protein motif:HMM:NF021517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2244 domain-containing protein"
                     /protein_id="HEX4296473.1"
                     /translation="MSTKTQARPLFAATLTPHRSLTPGGKRIVIGLVVALALAPALVF
                     YAAGAWPVVGFMALDVAAIWAAMTLTMRGGKSYEVLTLWPSALELRKIDPKGKEELVS
                     FVPTGVRFLVDRDYNERVTALWLKVEDKRVPLGAFLSAEEKLSLSKVFGTALRKARH"
     gene            1706..>2271
                     /locus_tag="VHZ56_00475"
     CDS             1706..>2271
                     /locus_tag="VHZ56_00475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX4296474.1"
                     /translation="MAMTQHQALTPQDDYETVRAAIAYLSETGAEDVDLARFARSLGM
                     TERQLTELFRRWCGLSPKSFAQAVALDHARQLLADRASVLSTTYAVGLSSTSRLHDLF
                     VAHEAMPPGAFRQKGEGLEMIWGTAPSPFGTAVLVTTEYGLAGLGFADGETSIEAAFE
                     DLRGRWPNARFSRDDARIAPLAVRIFDRG"
BASE COUNT          334 a          797 c          768 g          372 t
ORIGIN      
        1 gaggtcgtcg gcgaacacgt cgccgagcgg gtcggccgcc accttgccca cgaacgccgt
       61 ccggccgccg aagccggcga cgcccgccgc cgtattggcc gccgagccgc cggaaatctg
      121 ccgcttgtcg gccggcatgc gctcgtagag cgacgccgag cgctcggcgt cgaccaggtg
      181 catgatgccc tcggtcagcc cctcgcgcac gaggaacgcc ggatcgatgg gggcgatcac
      241 gtcgacgatc gcattgccga tggtgagcac gtcgaactgt gtgtcagcca tcggccgccc
      301 gctgttgttg tccgggcgcg gagatagcgg gtaaccacgc ccagtgcaac gacgggctcc
      361 tgcgccggcg cgccgtcccg gtcgtgttct tcgctctcgc caatcgatcc cggacgggcc
      421 tgcctggcca accgctaggc gggcggcggc gtcttcggct cgaaccggca ccactcggcg
      481 atgatgcagc ggtagcattc cggcttgcgc gcgatgcaga cgtagcggcc gtggaggatc
      541 agccagtggt gggcgtgcag caggtattgc ttcggcacca ccttgaggag cttcagctcg
      601 acctcgagcg gatccttgcc cggcgcgagg ccggtccggt tggaaacgcg aaagacgtgc
      661 gtgtcgaccg ccatggtggc ctcgccgaac gccatgttga ggacgacatt ggcggtcttg
      721 cgcccgacgc cgggcagcga ttcgagggcc tcgcggtcgg ccggcacctc gccgccaaac
      781 ttttcgacca ggatctggct gagcgcgaag acgtttttcg ccttgttgcg gtagagcccg
      841 atggtcttga ccagctcggt gatccgctcg acccccagcc cgaccatctt tgccggcgtg
      901 tcggcgagcc cgaacagcgc cggcgtcgcc ctgttgacgc cggcatccgt cgcctgcgcc
      961 gacagcacca ccgccaccag cagcgtgaag gcgttgggcg ccaccagctc gcccttcggc
     1021 tccggattgg ctttttggaa cgcggcgaag acggcctcga cctcttcccg cgtcagacgt
     1081 tttgttgatc gactggcgga cgctttcgcc attctcactc ctccgattcg cggtctatag
     1141 tcagcgtgat gtcgaccaaa actcaagcca ggccgctttt cgccgcgacg ctgacgccgc
     1201 atcgctcgct gacgcccggc ggcaagcgca tcgtcatcgg cctggtggtg gcgctggcgc
     1261 tcgcgccggc gctggtgttc tacgccgccg gcgcctggcc ggtcgtcggc ttcatggccc
     1321 tcgacgtggc cgccatctgg gccgccatga cgctgacgat gcgcggcggc aagtcgtacg
     1381 aggtgctgac cctgtggccc tcggcgctgg agctgcgcaa gatcgacccg aagggcaagg
     1441 aggagctggt gagcttcgtg cccaccggcg tgcgcttcct cgtcgaccgc gactacaacg
     1501 agcgggttac ggcgctgtgg ctgaaggtcg aggacaagcg ggtgccgctc ggcgccttcc
     1561 tcagtgccga ggaaaagctg agcctcagca aggtgttcgg cacggcgctg cgcaaggcgc
     1621 ggcactaggc gggtcgcggt ccaccgccgg agcgcgcgaa cccggtcaaa accgggtcgc
     1681 atgacgcggc aaccgggctt atctgatggc catgacacag catcaggctc tcacccccca
     1741 ggacgactac gagaccgtcc gcgccgccat cgcctatctg agcgagaccg gcgccgaaga
     1801 cgtcgatctc gcccgctttg cgcggtcgct cggcatgacc gagcggcagc tcaccgaact
     1861 cttccgccgc tggtgcggac tgagccccaa gagcttcgcc caggcggtgg cgctcgacca
     1921 cgcaaggcag ttgctggccg accgggcgag cgtgctgtcg acgacctatg ccgtggggct
     1981 gagctcgacc tcgcgcctcc acgatctgtt cgtcgcccac gaggcgatgc cgcccggcgc
     2041 cttccgccag aagggcgaag gcctcgagat gatctggggc acggccccct cgccgttcgg
     2101 caccgccgtg ctggtcacca ccgaatacgg cctcgccggg ctcggcttcg ccgacggcga
     2161 gacctcgatc gaggcggcgt tcgaggatct gcgcggccgc tggccgaacg cccgcttcag
     2221 ccgcgacgat gcccgtatcg cgccgctggc ggtgcgcatc tttgaccgcg g
//
LOCUS       DATAZA010000020         5327 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3482694, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000020 DATAZA010000000
VERSION     DATAZA010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5327
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3482694"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..369)
                     /locus_tag="VHZ56_00480"
     CDS             complement(<1..369)
                     /locus_tag="VHZ56_00480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthetase"
                     /protein_id="HEX4296475.1"
                     /translation="MARFVFITGGVVSSLGKGLASAALGAVLQARGYKVRLRKLDPYL
                     NVDPGTMSPTQHGEVFVTDDGAETDLDLGHYERFTGRHANKRDNITTGRIYSDIITKE
                     RRGDYLGATVQVIPHVTDAIK"
     gene            complement(498..1106)
                     /gene="secG"
                     /locus_tag="VHZ56_00485"
     CDS             complement(498..1106)
                     /gene="secG"
                     /locus_tag="VHZ56_00485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015339948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEX4296476.1"
                     /translation="MQNVLLVAYLLIVLALIAVILLQRSEGGGLGMGGNAGGLMTVRG
                     SANLLTRTTAILAALFFATAIGLTILSSLNRGTDSILDQAAAPNGAAPSNVLDALTQM
                     QAGASSAAASTASSATTDPGLALPATPVSPGALAVPATNAADASSAAPVSSAAADASS
                     AAPVSSAAMASSAEPASSVAPPSSSSPAPSSAAPAPSSAPAQ"
     gene            complement(1224..1979)
                     /gene="tpiA"
                     /locus_tag="VHZ56_00490"
     CDS             complement(1224..1979)
                     /gene="tpiA"
                     /locus_tag="VHZ56_00490"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEX4296477.1"
                     /translation="MADTITPLIAGNWKMNGLRATLVEAEKLASRLTAGPPPRCTVAL
                     CPPATLIAALNRIAAPAGIVVGAQDCHPAASGAHTGDLSAPMLADAGAQLVIVGHSER
                     RADHGETDELVRQKAVAVLAAGLTPIICVGESRAERQAGQADTIVSRQLAGSVPAEAA
                     DDEVVVAYEPVWAIGTGLTPTASDIAQMHKSLRDQLVKRFGRRGKSIRLLYGGSLKPA
                     NAAEILAIPEVNGGLVGGASLLADDFAAIIWAV"
     gene            2067..3938
                     /locus_tag="VHZ56_00495"
     CDS             2067..3938
                     /locus_tag="VHZ56_00495"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HEX4296478.1"
                     /translation="MMNLMRRFASTLVGKLLGGLLLVGLAGFGISNVISDLGTNDLAH
                     VGSDTISIQDFQRAYQDQLNQAAQQLGQMPTNDQAIQLGIPATVLGNLAARSAINQFA
                     VSQGIGVSDAKLAELVRNDPSFAGVLGTFERANFEQALQQEGYTEAQYFELQSRTART
                     QQLALGLLDGSATSRTAEDLLNRYRNDTRTVEYFTLNQTSLADVPTPTDADLAGYLKD
                     HQADFRTKETRTVDIVYLDPDALAAQYQPTEDEIKAEYDRTKDQLTKVEKRHIVQVVL
                     SDPAKEQFFKPGTSFDDDVKAAGLTTSDLGVFAKADVQDQALADAAFGLAKVGDFAVI
                     AGIGGKRVVSVSEIQAGGTPTYDDVKAQIAKTLAVAKAKAAYADLQDEIEELRAAFKP
                     LKDIASRYKLPVETVALTADGAQLSAVPGLPDEDKVKVANAVFAAKQGKLAPTVAFTA
                     TQNAWFDLSKVEPARDQTLAEVHDAVATAWTNAKVDAALQAEVKAMMADLDGGKSFQD
                     VAAAHSQFATVSQPITRDGDKTNVLTQQVATNIFSGGPDSHGWVVDGDGEYLVYHVLD
                     VTPPTGDPAQAITDYMTNSTRDSLYSEFGQGITDEIWPPAARGPAYQRMLAQLQTPQ"
     gene            3943..>5327
                     /gene="trpE"
                     /locus_tag="VHZ56_00500"
     CDS             3943..>5327
                     /gene="trpE"
                     /locus_tag="VHZ56_00500"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HEX4296479.1"
                     /translation="MAGQSYEQFATAYDAGRAQIVFRRVVADLETPIGAYLKLAEGRH
                     NTFLLESVQDGAIVGRYSMIGYDPDIILKVERGKAAINRDARLRPDAFVPLAEPPLAA
                     LRALVAESRVDVPEGLPATAAGIYGYLGYDMVRLMEELPDANPDDLGLPEAILSRPSV
                     LAIFDTLKDELYLTAPVYVRAGTTARQAWEAAQGRIDDATARLARTLPYGSALPDLTG
                     IAVTSNTSTAEYAAMVDAAKEYIRAGDIFQVVLSQRFEARFDLPPTALYRALRRTNPS
                     PYMYMLDFGDFAVAGSSPEILVKVEKGRITIRPIAGTRKRGATPTRDKELADELLSDP
                     KELAEHLMLLDLGRNDVGRVAKIGTVKVTDKFFLEYYSHVMHIVSNVIGELDPANDFV
                     DALAAGFPAGTVSGAPKVRAMEIIDELEKSRRGIYGGCVGYFGADGTMDTCIVLRTAI
                     IKDNTLYVQAGA"
BASE COUNT          894 a         1967 c         1651 g          815 t
ORIGIN      
        1 cttgatcgcg tcggtgacgt gcgggatcac ctgcaccgtg gcgccgaggt agtcgccgcg
       61 ccgctccttg gtgatgatgt cggaatagat gcggccggtg gtgatgttgt cgcgcttgtt
      121 ggcgtgccgg ccggtgaagc gttcgtaatg accgagatcg aggtcggtct cggccccgtc
      181 gtcggtgacg aacacctcgc cgtgctgggt cggcgacatc gtccccggat cgacgttgag
      241 gtaggggtcg agcttgcgca gccgcacctt gtagccgcgc gcctgcagca cggcacccag
      301 cgccgccgac gccagacctt tgcccaatga ggataccacg ccgccggtga tgaaaacgaa
      361 gcgagccatg ggccttcacc ttatgggggc gtcccaatga ttcggaagcc ccggcggcac
      421 ccatcgccgc ggccccacaa aaagaagaag gggatgtcgc catcccctcc cggttcgtct
      481 tgcggaagct ctccgctcta ttgggccggc gcgctgctcg gcgctggcgc ggcgctgctg
      541 ggcgccggcg aactgctgct cggtggcgcg acgctgcttg ccggttccgc gctgctcgcc
      601 atggcagcgc tgctgacggg agccgcactg ctggcatccg ccgcggcgct gctgacggga
      661 gccgcactgc tggcatccgc ggcgttggtc gccggcaccg ccagcgcgcc cggcgacacc
      721 ggggtcgccg gcagggccag ccccgggtcg gtggtcgccg acgatgccgt cgatgctgcc
      781 gccgacgagg cgcccgcctg catctgcgtt agcgcgtcca gcacgttgct gggtgcggcg
      841 ccgttgggcg ctgccgcctg gtcgaggatg gaatcggtac cgcggttaag cgagctcagg
      901 atcgtcagcc cgatggcggt ggcaaagaac agcgccgcaa ggatcgccgt ggtgcgggtg
      961 agcaaattgg ccgacccgcg taccgtcatc aggccgccgg cgttgccccc cattccgagc
     1021 ccgccgcctt cggagcgctg cagcaggatc accgcgatca gcgccagcac gatcagcagg
     1081 taggcaacga gcagcacatt ttgcattgca ggcggttctt tcaatggctc gccgcgcgca
     1141 gcgcggcaaa tcggggcggg tcatacacgg caggctgctc aattgccagc cgcttgcgcc
     1201 gatattgcgg cccgaccgtg aagttacacg gcccagataa tggccgcgaa gtcatccgcc
     1261 aagaggctgg cgcccccgac caggccgcca ttgacctcgg gaatggcgag gatttcggcc
     1321 gcattcgccg gcttgagcga gccaccatac agcagccgga tgcttttccc gcgcctcccg
     1381 aaccgcttaa ccagctggtc gcgcaggctt ttgtgcatct gggcaatatc ggacgccgtt
     1441 ggcgtcaggc ccgtgccgat ggcccacacc ggctcgtagg ccacaaccac ctcgtcgtcg
     1501 gccgcctcgg ccggcaccga accggcgagc tgccgcgaca cgatcgtatc cgcctgcccc
     1561 gcttggcgct cggcgcggct ttcgccgacg cagatgatcg gcgtcagccc cgccgccagc
     1621 acggcaaccg ccttctgccg gaccagctca tcggtctcgc cgtggtcggc gcgccgctcg
     1681 gaatggccga cgatcaccag ttgcgcgcct gcatccgcca gcatcggggc gctgagatcg
     1741 cccgtatgcg cgcccgaagc ggccggatgg cagtcctgcg cgccgaccac gatcccggcc
     1801 ggcgccgcga tccggttcag cgccgcgatc agcgttgccg gcgggcacag cgccaccgtg
     1861 cagcgcggcg gcggaccggc cgtcagccgg ctcgccagtt tctcggcctc gaccagcgtc
     1921 gcgcgcagcc cgttcatctt ccagtttccg gcgatcagcg gggtgatggt gtcggccaat
     1981 tggcgcgtct ccttgctctt gcacgggccc ggcgtttgcc ataacccctc tttgccgcaa
     2041 cgtcacccgt cccggatcgc ctgcccatga tgaacctgat gcgccgtttt gcctccaccc
     2101 tggtgggcaa gcttctcggc ggcctgctgc tggtcggtct tgccggtttc ggcatctcca
     2161 acgtcatttc cgatctcggc acgaacgatc tggcgcacgt cggcagcgac accatcagca
     2221 tccaggattt ccagcgcgcc taccaggacc agctgaacca ggcggcgcag cagctgggcc
     2281 agatgccaac caacgaccag gccatccagc tcggcatccc ggccaccgtg ctcggcaacc
     2341 tcgccgcccg ttcggcgatc aatcaattcg ccgtctcgca gggcatcggc gtgtccgacg
     2401 ccaagctcgc cgaactggtg cgcaacgatc cgagctttgc cggcgtgctc ggcaccttcg
     2461 agcgcgccaa tttcgagcag gcgctgcagc aggagggcta caccgaagcc cagtatttcg
     2521 agctgcagtc gcgcaccgcc cgcacccagc aattggccct cgggctgctc gatggcagcg
     2581 ccacctcgcg caccgccgag gacctgctca accgctaccg caacgacacc cgcacggtgg
     2641 agtatttcac cctcaaccag accagcctcg ccgacgtccc gacgcccacc gacgccgacc
     2701 tcgcgggcta cctcaaggat caccaggccg atttccgcac caaggaaacc cgcaccgtcg
     2761 acatcgtcta tctcgatccc gacgccctcg ccgcccagta ccaaccgacc gaagacgaga
     2821 tcaaagccga gtacgaccgg accaaggacc agctgaccaa ggtcgaaaag cgccacatcg
     2881 tgcaggtcgt actgtccgat ccggccaagg agcagttctt caagccgggc accagcttcg
     2941 acgacgacgt caaggcggcc gggctgacca cgtccgacct gggcgtcttc gccaaggccg
     3001 acgtgcagga ccaggccctc gccgacgccg ccttcggcct cgccaaggtc ggcgacttcg
     3061 ccgtcatcgc cggcatcggc ggcaagcgcg tggtatcggt cagcgagatc caggccggcg
     3121 gcacgccgac ctacgacgac gtcaaggcgc agatcgccaa gacgctggcg gtcgccaagg
     3181 ccaaggccgc ctacgccgac ctgcaggacg agatcgagga gctgcgcgcc gccttcaagc
     3241 cgctcaagga catcgccagc cgctacaagc taccggtcga gaccgtcgcg ctgaccgccg
     3301 acggcgccca gttgtcggcc gtccccggcc tgcccgacga ggacaaggtc aaggtcgcca
     3361 acgccgtctt tgccgccaag cagggcaagc tcgcccccac cgtcgccttc accgcgacgc
     3421 agaatgcgtg gttcgatctc agcaaggtcg agcccgcccg cgaccagacg ctggccgaag
     3481 tccacgacgc agtcgccacc gcctggacca acgccaaggt cgacgcggcc ctgcaggccg
     3541 aggtgaaggc catgatggcc gacctcgacg gcggcaagag ttttcaggac gtcgccgccg
     3601 cccacagcca gttcgccacc gtcagccagc cgatcacccg cgacggcgac aagaccaacg
     3661 tgctgaccca gcaggtcgcc accaatatct tttcgggcgg ccccgacagc catggatggg
     3721 tggtcgatgg cgacggcgaa tacctcgtct atcacgtact cgacgtgacg cccccgaccg
     3781 gcgatccggc gcaggccatc accgattaca tgaccaactc cacccgcgac tccctctatt
     3841 cggagttcgg ccagggcatc accgacgaaa tctggccgcc cgccgcgcgc ggtcctgcct
     3901 accagcgcat gctcgcccaa ctccagacgc cgcagtgatg cgatggcggg ccagagctac
     3961 gagcagttcg cgacagccta cgatgcgggg cgagcccaga tcgtcttccg ccgcgtcgtc
     4021 gccgatctcg aaacgcccat cggcgcgtac ctgaagctcg ccgaaggccg ccacaacacc
     4081 ttcctcctcg agagcgtgca ggacggcgcc atcgtcggcc gctactcgat gatcggctat
     4141 gatcccgaca tcatcctcaa ggtcgagcgc ggcaaggccg cgatcaaccg cgatgcccgc
     4201 ttgcggcccg atgccttcgt gccgctcgcc gagccgccgc tcgcggcgct gcgggcgctg
     4261 gtggccgaaa gccgcgtcga cgtccccgag ggcctgccgg ccaccgccgc cggcatctac
     4321 gggtacctcg gctacgacat ggtgcggctg atggaggaat tgcccgacgc caatcccgac
     4381 gacctcggcc tgcccgaggc catcctgtcg cgcccgtcgg tactggcgat cttcgacacc
     4441 ctcaaggacg agctctacct taccgcgccg gtctacgtgc gggccggcac cacggcccgg
     4501 caggcatggg aagccgcgca gggccgcatc gatgacgcca ccgcccgcct cgcccgcact
     4561 ttgccttacg gctccgccct gcccgacctc accggcatcg ccgtcacctc caacaccagc
     4621 acggccgaat atgccgccat ggtcgatgcg gccaaggaat acatccgcgc cggcgacatc
     4681 ttccaggtcg tcctcagcca gcgcttcgag gcgcgcttcg acctgccgcc gaccgccctc
     4741 tatcgcgccc tgcgccgcac caatccgtcg ccctacatgt acatgctgga tttcggcgat
     4801 ttcgccgtcg ccggctcgag cccggagatc ctcgtcaagg tcgagaaggg gcggatcacc
     4861 atccggccca tcgccggcac ccgcaagcgc ggtgcgacac ccacccgcga caaagagctg
     4921 gcggacgaat tgctgagcga tcccaaggag ctggccgaac acctgatgct gctcgatctc
     4981 ggccgcaacg acgtcggcag ggtggcgaag atcggcaccg tcaaggtgac cgacaagttc
     5041 ttcctcgagt actattccca cgtcatgcac atcgtctcca acgtcatcgg cgagctcgat
     5101 cccgccaatg acttcgtcga cgccctcgcc gccgggtttc cggccggcac cgtctcgggc
     5161 gccccgaaag tgcgggccat ggagatcatc gacgagctcg agaagtcgcg ccgcggcatc
     5221 tatggcggct gcgtcggcta tttcggcgcc gacggcacca tggacacctg catcgtgctg
     5281 cgcaccgcca tcatcaagga caacacgctt tacgtgcagg ccggcgc
//
LOCUS       DATAZA010000021         5411 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2322361, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000021 DATAZA010000000
VERSION     DATAZA010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5411
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2322361"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..891)
                     /gene="dnaG"
                     /locus_tag="VHZ56_00505"
     CDS             complement(<1..891)
                     /gene="dnaG"
                     /locus_tag="VHZ56_00505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002964587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEX4296480.1"
                     /translation="MRFSDGFLDEIRQRLPIHEVVGEQVIWDKRKSQPGRGDYWACCP
                     FHGEKTPSFHADDRKGIYHCFGCGVSGDHFRFLVEKAGMSFPEAVEKLAGMAGVAMPA
                     RDEREEARDEARRSLYDVMDVAAAYFEAALAHNIGARARGYLFERGVSAAAQTRFRIG
                     FSPDSRNGLKEHLAANGVSGQEMIDTGLVIAGDDIAVPYDRFRNRVMFPITDFRGRII
                     AFGGRALSADVPAKYLNSPETPLFSKRLVLYNGMDARKAARDGKPVIVVEGYLDVISA
                     VMAGFEGTVAPLGTALTEDHV"
     gene            1003..1404
                     /locus_tag="VHZ56_00510"
     CDS             1003..1404
                     /locus_tag="VHZ56_00510"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX4296481.1"
                     /translation="MTPADFDRFLEDRKDAAKAYVQGDFAPVDHLADSGFVATFFGPD
                     GKIVKGGGAVRKSFKEGAAQFLPESTSELEILDSGADGDLGFWTGIQHATVRIKGKDA
                     PLPYELRITEIFRREHGSWKLVHRHADPLKS"
     gene            1469..2377
                     /locus_tag="VHZ56_00515"
     CDS             1469..2377
                     /locus_tag="VHZ56_00515"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEX4296482.1"
                     /translation="MALTATRHPGDRLGQLKRVVLDTLKVFLDPDTSPRCAATAFFGF
                     LSFFPAIATVALIYGIVASGPLVAKTVDSLGGVMPAIALGILDEQLKMLAAAPQASLG
                     IGLVISIPLALWSGSRGVEALLFAMSRVRGAPERRGFVKEVLVAVGLTIAGSIFVAIA
                     LVTVAGLPALIPFPTGAGWLLLVLRWPVLLVLSAVVMGVLYRFGPDRHPHRLRFIWPG
                     AVLASVLWILAGAVFSIYVQNWGNYSATFGSVSAAVVLLLWMYNSAQILVLGAAFNAA
                     IEKAAGVAPTSGVVTAPAQAGTALPR"
     gene            complement(2350..2913)
                     /locus_tag="VHZ56_00520"
     CDS             complement(2350..2913)
                     /locus_tag="VHZ56_00520"
                     /inference="COORDINATES: protein motif:HMM:NF015674.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF308 domain-containing protein"
                     /protein_id="HEX4296483.1"
                     /translation="MAAMNLQKRWGVIMGLRGLLMLLAGLYAVIWPGPALAVLVVAGG
                     IILLVDGVLGLWSLTFGGGKTGNFWFDVVRNVLAIICGVVILLFPLLSTLITVWFVVY
                     LIAIQAIVVGVMEIVMAVRERAMMGKVWPILLSGILYVLFGIALVFAPLMSALFLVVF
                     AGVMMILFSIGLFTLAWRLYRGNAVPA"
     gene            3061..4236
                     /locus_tag="VHZ56_00525"
     CDS             3061..4236
                     /locus_tag="VHZ56_00525"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4296484.1"
                     /translation="MPIAVFALALAAFSIGTTEFIVSGILLSVSRDLAVSVPTAGLLV
                     TGYAAGVAVGGPLLGLLLTRLPLKPAILGVMVIFAIGQLLCALAPSYELLLGARLVSA
                     CGHGVFFGVASVAVAQLVPVERRGAALSLFVGGITVANILGLPGGTAIGNIFGWRVAF
                     VCIAVFALASVVAVFFALPAQIKGEAQADAPLAVQARQLLHQDVLLSYVVIAIIMVGQ
                     LAFGTFQVAILTNVTGVDPVSAVPFFLLIGGAGAVTGIWLGGKAADRNVAATILTVIA
                     GQIVCFALLFVTARSPVGFAIMLFLSSAFGFGFSTPIQMRILNGARAAPRLASTMVST
                     AYNVGIAAGAALGAMLLDAGVDYSLLPLVGIVSSTLSGLVALVSVYLDRLPRLAAAA"
     gene            4236..5393
                     /locus_tag="VHZ56_00530"
     CDS             4236..5393
                     /locus_tag="VHZ56_00530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015342725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4296485.1"
                     /translation="MSLALFALFAAAFAIGTSEFVIAGILPAVSSDLSISIPTAGLLV
                     SLYALGVAVGGPLLATFTGRFPRKPLLLVYVTIFTIGYVLCALAPGFEVLLVYRVLIA
                     LIHGAYFGTAMVVATTIVPEQKRGFAVALILAGLTVANIVGVPIGTAIGTAFGWRATF
                     WTVAATGIIAFAAIAALVPSDHAHEAEQGSFLAEIRALGREPVYSSLAIIMLQTVGQF
                     ALFTYISPLLTTVSGIGLDTVPWLLLLIGIGSTIGVLLGGRLADWKLMASLAGILALQ
                     VVVFALMIPLAHNPWTMGVLVLLYGALAFAFGSPVQTRILGNTRDAPLLASSLIPSAF
                     NIAIAAGAWFGGTLIDRGFSYGVLPWVGVVGSAAALAVSLLSWRAERRRAG"
BASE COUNT          764 a         2034 c         1645 g          968 t
ORIGIN      
        1 cacgtggtcc tcggtgagcg ccgttccgag cggcgccacg gtcccctcga accccgccat
       61 caccgccgaa atcacgtcga gatagccctc gaccacgatc accggcttgc cgtcgcgggc
      121 cgccttgcgc gcgtccatgc cattgtagag caccagccgc ttcgaaaaga gcggcgtctc
      181 cggcgaattg agatacttgg ccggaacatc ggcgctgagc gcccggccgc cgaacgcgat
      241 gatgcgaccg cggaaatcgg tgatcggaaa catcacccgg ttgcggaagc ggtcgtaggg
      301 cacggcgatg tcgtcgccgg caatcaccag cccggtatcg atcatctcct gcccggagac
      361 gccgtttgcc gccagatgct ccttcagccc gttgcggctg tcgggcgaaa agccaatccg
      421 gaaccgcgtc tgtgccgctg cgctgacccc ccgctcgaac agatagccgc gggcccgcgc
      481 cccgatattg tgggccagcg ccgcctcgaa atacgccgcc gccacgtcca tcacgtcgta
      541 gagcgagcgg cgggcctcgt cgcgcgcctc ttcgcgctcg tcgcgcgccg gcatcgccac
      601 gcccgccatg ccggcgagct tctccacggc ctcgggaaag ctcatgccgg ccttctcgac
      661 gaggaagcgg aaatgatcgc cgctcacccc gcagccgaag caatggtaga tgcccttgcg
      721 gtcgtcggca tgaaagctcg gcgtcttctc gccgtggaac gggcagcagg cccagtaatc
      781 gccacggccg ggctggctct tgcgcttgtc ccagatcacc tgctcgccca cgacctcatg
      841 gatcggcagg cgctgccgga tctcgtcgag gaagccatcg gaaaagcgca tgtccgtaag
      901 taagcgctgg ccgacccgaa gtcaccgccc ttccccgcta ttcacatcgg aaccgctgtc
      961 cgggcgacgc gttcgatcca ttcgcacgcc gaggaggacc cgatgacccc agccgatttc
     1021 gaccgcttcc tcgaggaccg gaaggacgct gcaaaggcct atgtgcaggg cgacttcgcg
     1081 ccggtcgacc atcttgccga cagcggcttc gtcgccacct tcttcgggcc cgatggaaag
     1141 atcgtcaaag gcggcggcgc cgtccgcaag tccttcaagg agggcgcggc acagtttctg
     1201 cccgagagca ccagcgaact cgaaatcctc gactccggcg ccgacggtga cctcggcttc
     1261 tggaccggca tccagcacgc cacggtccgc atcaagggca aggacgcccc gcttccctac
     1321 gagctcagga tcaccgaaat cttccggcgc gagcacgggt cgtggaagct ggtccaccgc
     1381 cacgccgacc cgctgaaatc ctaggcagca cgggctgcaa ccaccccgcc gaacccctcg
     1441 ttgagctttg aacatggagg ctcggcccgt ggcccttacc gcgacccgtc acccaggcga
     1501 ccgcctgggt cagctcaagc gcgtggttct cgacaccctg aaggtcttcc tcgaccccga
     1561 tacctcgccc cgctgcgccg ccacggcgtt cttcggcttc ctgtcgttct ttccggccat
     1621 cgccacggtc gccctcatct acggcattgt cgcgagcggc ccgctggtcg ccaagacagt
     1681 cgacagcctg gggggcgtca tgccggccat cgccctcggt attctcgacg aacagctcaa
     1741 gatgctcgcc gcggcgccgc aggccagcct cggcatcggc ctcgtcatct ccattccgct
     1801 cgctctctgg tcgggctcgc gcggggtcga ggcactgctc tttgccatgt cccgcgtgcg
     1861 cggcgcgccc gagcgccgcg gcttcgtcaa ggaagtgctc gtcgcggtcg gcctgaccat
     1921 cgccggctcg atcttcgtgg cgatcgcgct cgtcaccgtc gccgggctgc cggcgctgat
     1981 tccattcccc accggcgcgg gatggctgct gctggtgctg cgctggccgg tgctgctggt
     2041 gctctcggcg gtggtgatgg gcgtgctcta ccgcttcggg cccgatcgcc acccccaccg
     2101 gctgcgcttc atctggcccg gcgccgtcct cgcctcggtg ctgtggatac tggccggcgc
     2161 ggtgttctcc atctacgtgc agaactgggg caactacagc gccaccttcg gctccgtctc
     2221 ggccgcggtc gtgctgctgc tgtggatgta caactctgcc cagattctcg ttctcggggc
     2281 ggccttcaat gccgccatcg agaaagcggc cggcgtcgcg ccgacctccg gcgtcgtgac
     2341 cgcgccggct caggccggca cggcattgcc gcgatagagc cgccacgcca gcgtgaacag
     2401 gccgatcgag aacaggatca tcatcacccc cgcgaacacc acgaggaaaa gcgcgctcat
     2461 cagcggcgcg aacaccagcg cgatgccgaa cagcacgtag aggatgcccg atagcaggat
     2521 cggccagacc ttgcccatca tggcccgctc gcgcaccgcc atcacgatct ccatgacgcc
     2581 cacgacgatc gcctgaatgg cgatgagata aaccacgaac cacaccgtga tcagcgtcga
     2641 cagcagcgga aacagcagga tcaccacgcc acagatgatg gcgagaacgt tgcgcaccac
     2701 gtcgaaccag aaattgccgg tcttgccgcc gccgaaggtc aggctccaca gcccgagcac
     2761 gccatcgacc aggaggatga tgccgccggc gacgaccagc accgccagcg ccggtcccgg
     2821 ccagatcacc gcatagagcc cggcgagcag catcagcagc ccgcgcagcc ccatgatcac
     2881 gccccaccgc ttctgaagat tcatcgctgc catttttatc tccattggcc gaatgcgagg
     2941 attatgcccc agctccgggg caaaagcact tgtcctcggg caaccgtccc ctacggcagt
     3001 cgcaggggtt gccgccgggt cggccaaatg ctcttgtccg ccgctttcca gggtcacccc
     3061 atgcccatcg ccgtcttcgc gctcgcgctc gccgcgtttt ccatcggcac gacggaattc
     3121 atcgtctcgg gcatcctgct gtcggtgtcg cgcgaccttg ccgtcagcgt cccgacggcc
     3181 ggcctgctgg tcaccggcta tgccgccggc gtcgcggtgg gcggcccgct gctcggcctg
     3241 ctgctgaccc gactgccgct gaaacccgcc atcctcggcg tcatggtcat cttcgccatc
     3301 ggccagctgc tctgcgccct cgcgccgagc tacgaactgc tgctcggcgc ccgcctggtg
     3361 tcggcctgcg gccatggcgt attcttcggc gtcgccagcg tagccgtcgc gcaactggtg
     3421 cccgtcgaac gccgcggcgc cgcgctgtcg ctgttcgtgg gcggcatcac cgtcgccaac
     3481 atcctcggcc tgcccggcgg caccgccatc ggcaacatct tcggctggcg cgtcgccttc
     3541 gtctgcatcg cggtctttgc gctcgcctcg gtggtcgccg tgttctttgc ccttcccgca
     3601 cagatcaagg gcgaggccca ggccgatgcg ccactggccg tacaggcccg ccagctgctg
     3661 caccaggacg tgctgctgtc ctacgtcgtc atcgccatca tcatggtcgg gcagctggcc
     3721 ttcggcacct tccaggtggc gatcctcacc aatgtcaccg gcgtcgatcc ggtgagcgcg
     3781 gtgccgttct ttctcctcat cggcggggcc ggcgcggtca ccggcatctg gctcggcggc
     3841 aaggccgccg accgcaacgt cgcggccacc atcctcactg tcatcgccgg ccagatcgtc
     3901 tgcttcgcgc tgcttttcgt gacggcgcgc agcccggtcg gcttcgccat catgctgttc
     3961 ctcagttccg ccttcggctt cggtttctcg accccgatcc agatgcgcat cctcaacggc
     4021 gcgcgcgccg ccccgcggct cgcctcgacc atggtgtcga ccgcctacaa tgtcggcatc
     4081 gccgccggtg ccgcgctcgg cgccatgctg ctggacgcgg gcgtcgacta ctcgctgctg
     4141 ccgctggtcg gcatcgtctc cagcacgctc tccgggctcg tggccctcgt ctcggtgtat
     4201 ctcgaccgcc tgccccggct cgcggcggcc gcctgatgtc cctcgccctc ttcgcgctgt
     4261 tcgccgccgc cttcgccatc ggcacgtcgg agttcgtgat tgccggcatc ctgccggccg
     4321 tctcgtcgga cctcagcatc tctatcccga cggccggcct gctcgtcagc ctctacgcgc
     4381 tcggcgtcgc cgtcggcgga ccgctgctcg cgaccttcac cggccggttc ccgcgcaagc
     4441 cgctgctgct ggtctatgtg acgatcttca ccatcggcta cgtcctttgc gcgctcgccc
     4501 cgggctttga ggtgctgctc gtttatcggg tgctgatcgc gctgatccac ggcgcctatt
     4561 tcggcacggc gatggtggtg gcgaccacta tcgtgccgga gcagaagcgc ggcttcgcgg
     4621 tggcgctcat ccttgcgggg cttacggtcg ccaacatcgt cggcgtgccg atcggcaccg
     4681 ccatcggcac cgcgttcggc tggcgcgcca ccttctggac cgttgccgcc accggcatca
     4741 tcgccttcgc cgccatcgcc gcgctggttc cgtccgacca cgcccacgag gccgaacagg
     4801 gaagcttcct cgccgagatc agggccctcg gccgcgagcc ggtctactcc tcgctcgcca
     4861 tcatcatgct gcagacggtc ggccagttcg cgctcttcac ctacatctcg ccgctgctga
     4921 ccaccgtctc cggcatcggc ctcgacaccg tgccatggct gctgctgctc atcggcatcg
     4981 gctcgaccat cggcgtgctg ctcggcggcc gcctcgccga ctggaagctg atggcctcgc
     5041 tggccggcat cctcgcgctc caggtggtgg tttttgcgct gatgatcccg ctggcgcaca
     5101 acccctggac gatgggcgtg ctggtgctgc tctacggcgc cctcgccttc gccttcggct
     5161 cgccggtgca aacccgcatc ctcggcaata cccgcgacgc cccgctgctc gcctcgagcc
     5221 tcatcccgtc ggccttcaac atcgccatcg cggcgggcgc ctggttcgga ggcaccctga
     5281 tcgaccgcgg cttcagctac ggcgtgctgc cctgggtggg cgttgttggc tccgccgcgg
     5341 cgctcgcggt gtcgctgctg tcctggcgcg ccgaacggcg gcgggcaggt tagccgagcg
     5401 cggcctttac c
//
LOCUS       DATAZA010000022         1785 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3482752, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000022 DATAZA010000000
VERSION     DATAZA010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1785
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3482752"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..307
                     /locus_tag="VHZ56_00535"
     CDS             <1..307
                     /locus_tag="VHZ56_00535"
                     /inference="COORDINATES: protein motif:HMM:NF045432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HEX4296486.1"
                     /translation="ATDEPDRFTANIRKVNRKGRMFVDYLRNERGATAVCPFSTRAKD
                     GATCAVPLGWDELDGIAGANIFGIAEAAARAQAPDPWPDYFKVRQAITQKMLKAVEA"
     gene            complement(503..1528)
                     /gene="hemH"
                     /locus_tag="VHZ56_00540"
     CDS             complement(503..1528)
                     /gene="hemH"
                     /locus_tag="VHZ56_00540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019861049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEX4296487.1"
                     /translation="MLEGRKPADHPSVKPPKVGVLLLNLGTPDSPDYWPMRRYLGEFL
                     SDRRVIETNPVLWQLILQGIILNVRPQKSGANYRKIWDREAGDSPLRVILRRQAEKLQ
                     AVLGEGVVVDFAMRYGNPSTEVGIRALQAAGCQKILLCPLYPQYSATTTATANDAAFD
                     VLKTMRWQPAIRTLPPYCATPDYVAALARSIADGVAALPFKPDVVLTSYHGMPIEYLI
                     KGDPYYCDCLMTTRLVRETLGWSSDYLRVTFQSRFGPDEWLKPYTDKTLMALGAEKKK
                     VAILAPAFSADCIETLEELAITGREQFVHAGGGHDDYAYIPCLNDSAVGMKMLEAVVR
                     RELAGWI"
     gene            complement(1584..>1785)
                     /locus_tag="VHZ56_00545"
     CDS             complement(1584..>1785)
                     /locus_tag="VHZ56_00545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020180760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEX4296488.1"
                     /translation="LILSQVVLSFQLPFAVVPLVWFTASRAKMGELVAPRWVSGLATI
                     VAVAIIGLNAKLIWDFFGGTLA"
BASE COUNT          308 a          621 c          569 g          287 t
ORIGIN      
        1 cgcgaccgac gagcccgacc gcttcaccgc caacatccgc aaggtcaatc gcaagggccg
       61 gatgttcgtc gactacctgc gcaacgagcg cggcgccact gcggtctgtc ccttttcgac
      121 gcgcgccaaa gacggcgcga cctgcgccgt gccgctgggc tgggacgaac tggatggcat
      181 cgccggcgcc aacatcttcg gcatcgccga agcggccgcc cgcgcccagg cgcccgatcc
      241 gtggccggac tatttcaagg tcaggcaggc gatcacgcag aaaatgctga aggcggtcga
      301 ggcctagcca gcagtcggca cccacctccc cccatgcggg ggaggaagcg agataggact
      361 tagcccttcg ctaagtccgt gatcgagcag cgggggaagc agtcagcacc gagtgtgcct
      421 cgcccccctt cccagcttcg ccacgtcgca atcgctcctg gctgcgctag cctccccgca
      481 tgggggaggg tgatccccac tgctaaatcc accctgctaa ttcccgccgc actacggctt
      541 ccagcatctt catgcccacc gcgctgtcgt tgaggcatgg gatgtaggca tagtcatcgt
      601 ggccgccgcc ggcgtgcacg aactgctcgc ggccggtgat cgccagctcc tccagcgtct
      661 cgatgcaatc ggcggagaat gccggcgcca ggatcgccac cttctttttc tcggccccca
      721 gcgccatcag cgtcttgtcg gtgtagggct tcagccattc gtcggggccg aagcgcgact
      781 ggaacgtcac tctgaggtag tcggagctcc agcccagcgt ctcgcgcacc agccgcgtcg
      841 tcatcaggca gtcgcaataa tagggatcgc ccttgatcag gtattcgatc ggcatgccgt
      901 ggtacgaggt cagcaccaca tcgggcttga acggcagcgc cgcgacgccg tcggcaatgc
      961 tcctggcgag ggcggcgaca tagtcgggcg tcgcgcaata cggcggcagc gtgcggatcg
     1021 ccggctgcca gcgcatggtc ttcagcacgt cgaacgcggc gtcgttggcg gtcgccgtgg
     1081 tcgtcgccga atactgcgga tagagcggac agagcaggat cttctggcag cccgccgcct
     1141 gtagcgccct gatgccgacc tcggtcgacg gattgccgta gcgcatggcg aaatcgacca
     1201 cgacgccctc gccgagcacc gcctgcaact tctcggcctg ccgccggagg atcacccgca
     1261 gcgggctgtc gccggcctcg cgatcccaga tcttgcggta attggcgccg ctcttttgcg
     1321 gccgcacatt gaggatgatg ccctgcagga tcagctgcca gagcaccggg ttggtctcga
     1381 tcacccggcg gtcgctgagg aactcgccga ggtagcgccg catcggccag tagtccggcg
     1441 aatccggcgt gcccaggttg agcagcagca cgccgacctt gggcggcttg acgctcgggt
     1501 gatcggcggg ttttcggccc tcaagcatgg cgcgcacaat accgggcgga ctgttcggcg
     1561 caagccgggg ccgaatgccg cggctaggcc agcgtgccgc cgaaaaagtc ccagatcagc
     1621 ttggcgttga gcccgatgat cgccaccgcg acgatcgtcg ccaacccgct cacccagcgc
     1681 ggcgcgacca actcgcccat cttcgcccgg ctcgcggtga accacaccag cggcaccacg
     1741 gcgaacggca gctggaagct cagcaccacc tgcgacagga tgagc
//
LOCUS       DATAZA010000023         6089 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1625966, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000023 DATAZA010000000
VERSION     DATAZA010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6089
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1625966"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1110
                     /locus_tag="VHZ56_00550"
     CDS             <1..1110
                     /locus_tag="VHZ56_00550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296489.1"
                     /translation="LPGVARAIEIHHLAERYGVARGRSAIVATQSNFGYRLALRLHDA
                     GVAIRRVVDTRVNPQSRFVDFAKASGLTLGGGQVPVSASLTATRGVHAGFANAGTSQV
                     ALNLEAEQLVVSGSFQPSLRLWMLAGGATDWRHGRLEAAGHVERLALAGAAAGYRSMT
                     ACAESGRQAQALLFGGTPRVVEDREIDPMYETPDGTTAISPAWTGTAFLDAGTSLVMR
                     PAAAGASLPEVAALSLADVAASVDLGLIATTDAGAVAEERGAPGADLAASSWAPAPLA
                     APETPAWLASRFGAEPVRVHLIVDDRRTFEVGALVYANTSPADPARAIGVIVAAAPEG
                     RAGGIALVQKSAAGRKLRFVVETMRGPSPARPATD"
     gene            complement(1100..2224)
                     /locus_tag="VHZ56_00555"
     CDS             complement(1100..2224)
                     /locus_tag="VHZ56_00555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296490.1"
                     /translation="MIDAVCVAGPVDFPFDGAIVDDDAVAAWTWMVRDLASDLIDIEV
                     VDDTPQSLAALESLMPDLLARAKAALGEAATSPEAARRLKTQLGSEEAAERLPAVVTA
                     LRCRAILEKAQGFGRAANGMADEAMLALALQSMPLGDAAISPFVMQAAMGQVAVPARM
                     ITAAIRIAGGASEAALLRAGLGPLVDAMLAHAQAQLPALSQLGAFGDMDMICRAVDRF
                     HRLMRAVTGYVELSRSGRWAMVAAGLTKAVSERVEPKLRDVAPDINKALRRRDGADRL
                     DGDQILSALNGIYLLATVRDSRDSLALNAVFDQVWTQTGQALEIHIERLLTQLRANPA
                     DSIASARLDAALKIAEIRFSQEYADVLRRAKDATERRVSP"
     gene            complement(2399..2878)
                     /locus_tag="VHZ56_00560"
     CDS             complement(2399..2878)
                     /locus_tag="VHZ56_00560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006199720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296491.1"
                     /translation="MQQITRALLILPVLALAACATSPTVTNLAMAPAADTAAPADATP
                     LAAPAQTISSAAATTDVTAFVDPTAYGLLTGKSKAEVAGAQFNALQFGRVGAPRNWQG
                     DKNQSGMVTVGPYVRVNLIDCRDFTNTVTIGAQNYVKKGTACRGADGSWTVSPPAAG"
     gene            complement(2935..4305)
                     /locus_tag="VHZ56_00565"
     CDS             complement(2935..4305)
                     /locus_tag="VHZ56_00565"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX4296492.1"
                     /translation="MRKGSITFALFWLSAGWLIVALAGTAFLLTELYSRALDTNLTNQ
                     LKFDIDTLSSNVLDSTDPHLADVGLPDPRFSRAATGFYWIIRDAAGNILANSRSMVGM
                     VAPALSGTFDADNYRTALLTDDQGNHMRVIERSTTSDGRPLGITVTGSLDESQSLVSQ
                     FRGQTLIVLGAVGIALAIMSGIVARLALRPIGRLSRAIEQVREGETETITGTYPREIA
                     PLAEEVNELLRSNTQIIERARSQVGNLAHGLKTPLAVLRNEAATARDTPLGKVVASES
                     EKMTQLVTTYLDRARIAARSAVVGKRADATMVMLRLVRVMEKLNKHVTIAFKRPDASL
                     PWFRGDEGDLEEMAGNLLDNACKWSKGKIAVTMMAERGATQQMLLIRVEDDGPGLTEE
                     EATKVLRRGVRLDEKTPGSGLGLDIVKELVDVYGGSLQLKRSVLGGVLAELRLPAAKL
                     GGLARS"
     gene            complement(4313..4972)
                     /locus_tag="VHZ56_00570"
     CDS             complement(4313..4972)
                     /locus_tag="VHZ56_00570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX4296493.1"
                     /translation="MRILVVEDDTNLNRQIKDALTEGGYAVDVAFDGEEGHFLGDTEP
                     YDAVVLDIGLPQMDGLSVLEEWRRAGKSMPVLLLTARDRWSDKVQGIDAGADDYVAKP
                     FHMEELLARLRALVRRAAGHASNEITAGPVRLDVKAGKVTVDGQAIKLTSHELRLLSY
                     LMHHKGKVVSRTELTEHLYDQDFDRDSNTIEVFVGRLRKKLPEEVIHTVRGLGYQILE
                     D"
     gene            complement(5004..5321)
                     /locus_tag="VHZ56_00575"
     CDS             complement(5004..5321)
                     /locus_tag="VHZ56_00575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296494.1"
                     /translation="MTFLRRIRIAMTAAAICSLAAVLPAAAAPRQGNCLSDQQIQAEI
                     GSGQIQSWARIRKLAGIPKDYYETSDVQVCLRGGVPYFMVNMVSPKGENFKMVLNAVD
                     GSR"
     gene            complement(5369..>6089)
                     /locus_tag="VHZ56_00580"
     CDS             complement(5369..>6089)
                     /locus_tag="VHZ56_00580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyl hydrolase 108 family protein"
                     /protein_id="HEX4296495.1"
                     /translation="LEGGYVDDPRDPGGATNLGITRRTLASWRKVTPWTALPKAAVAA
                     LTRAEAAEIYRGLYWTPVRGAELPAGLDLAVFDFAVNSGPPRAIRALQQLLGVAADGL
                     FGPKTAAAIADRVAIRGAAPLIGSLCDRRLGWLRRLAAYSTFGRGWTRRVATIRTAAL
                     AMAGTTLPPPTPRKTEMNLDFLSGYKTYIVAAAMLLTGLAGVIGIDIPNFTGTAPGSL
                     VMEALAFFFLRQGLKTNVTNS"
BASE COUNT          892 a         2024 c         2223 g          950 t
ORIGIN      
        1 ctgccggggg tggcccgcgc catcgagatc catcacctgg ccgagcgcta cggcgtcgcc
       61 cgcggccgca gcgccatcgt cgcgacgcag agcaatttcg gctaccggct ggcgctgcgc
      121 ctgcacgacg ccggcgtcgc catccgccgc gtcgtcgata cccgcgtcaa tccgcagtcg
      181 cgcttcgtcg atttcgccaa ggccagcggg ctgacgctgg ggggcgggca agtgccggtg
      241 tccgccagtc tcaccgcgac gcgcggcgtg catgcgggct tcgccaatgc cggcacgagc
      301 caggtggcgc tgaacctcga agcggaacag ctggtggtct ccggtagctt ccagccctcc
      361 ctgcggctct ggatgctcgc gggcggcgcc accgactggc ggcacggccg gctcgaggcc
      421 gccggccacg tcgagcggct ggcgctggcc ggcgcggcgg cgggataccg gtcgatgacg
      481 gcctgcgccg aaagcggcag gcaggcgcag gcgctgctgt tcggcggcac gccgcgggtg
      541 gtcgaggatc gcgagatcga cccgatgtac gagaccccgg acgggacgac cgcaatcagc
      601 ccggcgtgga ctggaacggc attcctcgat gccggtacca gcctcgtcat gcggccggcc
      661 gcggcgggtg cctcgctgcc ggaggtggcg gcgctgtcgc tggccgatgt cgcggcgtcg
      721 gtcgacctcg ggctgatcgc gaccaccgac gccggcgccg tcgccgaaga gcgcggcgcg
      781 ccgggggcgg acctcgcggc atcgagctgg gcaccggccc cgcttgccgc tcccgagaca
      841 ccggcatggc tggcgagccg gttcggggcc gagccggtac gggtgcatct catcgtcgac
      901 gaccgccgga ccttcgaggt cggggcgctg gtctatgcca acacgtcccc agccgatccg
      961 gcgcgggcga tcggcgtcat cgtcgccgcg gcgccggagg gcagagcggg cggcatcgcg
     1021 ctggtgcaga aatcggcggc ggggcgcaag ctgcggttcg tcgtcgagac gatgcgcggg
     1081 ccctcgccgg cgcggccggc tacggactga cccgccgctc ggtggcgtcc ttggcgcgcc
     1141 gcagcacgtc ggcgtattcc tggctgaagc ggatttcggc gatcttcagc gccgcatcga
     1201 gccgcgccga ggcaatcgaa tcggcgggat tggcgcgcag ctgcgtcagc agccgctcga
     1261 tgtggatttc gagcgcctgg ccagtctggg tccagacctg gtcgaagacc gcgttgagcg
     1321 ccagcgagtc gcggctgtcg cgcacggtcg ccagcagata gatgccattg agggcggaga
     1381 ggatctggtc gccatcgagg cggtcggcgc catcgcgccg gcgcagcgcc ttgttgatgt
     1441 cgggggcgac gtcgcggagc ttgggctcga cccgctcgga caccgccttg gtgagacccg
     1501 cggcgaccat cgcccagcgg ccgctgcggg acagctcgac atagccggtc accgcgcgca
     1561 tcagacgatg gaagcggtcc acggcgcggc agatcatgtc catgtcgcca aaagcgccga
     1621 gctgcgacag ggccgggagc tgggcctgcg cgtgggccag catggcgtcg accagcggcc
     1681 cgagtccggc gcgcagcagc gccgcttccg aggcgccgcc ggcgatgcgg atggcggcgg
     1741 tgatcatgcg ggcgggaacc gccacctggc ccatcgccgc ctgcatcacg aagggggaaa
     1801 tcgccgcatc gccgagcggc atcgactgca gcgccagcgc cagcatcgcc tcgtcggcca
     1861 tgccgttggc ggcgcggccg aaaccctggg ccttttcgag gatggcgcgg caccgcagcg
     1921 ccgtgaccac ggccggcagc cgctcggcgg cctcctcgct gccgagctgc gtcttcagcc
     1981 ggcgagcggc ctccgggctc gtcgcggcct cccccagcgc cgccttggcg cgggccagca
     2041 ggtcgggcat cagcgattcg agggcggcga ggctctgcgg ggtgtcgtcg acgacctcga
     2101 tgtcgatgag gtcggaggcg aggtcgcgga ccatccaggt ccaggccgcc accgcgtcgt
     2161 cgtcgacgat ggcgccgtcg aaggggaaat ccaccggccc ggcgacgcac accgcatcga
     2221 tcaagccgag gaaaggctgg ccgcccttct gcgaacgggg ggcgccccgc gcgcggtcgg
     2281 cagggaccgc cggacggaca ttggcttgcg gcataagaga ccagggcgag tttggtggtc
     2341 cggcgactct agtctgccct tggtaaacaa atttcctacg cgcggcgggg ctttagccct
     2401 agccggcggc gggcgggctc accgtccagc tgccgtcggc gccgcggcag gcggtgcctt
     2461 tcttgacgta gttctgggcg ccgatggtca ccgtgttggt gaagtcacgg caatcgatga
     2521 ggttgacccg cacgtacggg ccgacggtca ccatgccgct ctggttcttg tcgccctgcc
     2581 agttgcgcgg cgcgccgacg cggccgaact gcagcgcgtt gaactgggcg ccggcgacct
     2641 cggccttcga cttgccggtc aacaggccat aggcggtggg atcgacgaag gcggtgacgt
     2701 cggtggtcgc cgcggcgctc gaaatggtct gcgccggagc cgccagcggc gtcgcatcgg
     2761 ccggtgcggc ggtgtcggcg gcaggcgcca tcgccagatt ggtcaccgtc ggcgaggtgg
     2821 cgcaggcggc cagcgcgagg acggggagaa tcaggagggc gcgggtgatc tgctgcatgc
     2881 tggttccgaa gctgaggcgg ttgtccaaga ccgcccaatc gcggcggagt taagtcagct
     2941 ccgggcaagg ccgccgagtt ttgccgccgg cagccgcagt tcggcgagaa cgccgcccag
     3001 aaccgagcgc ttcaattgca ggctgccgcc gtagacgtca accagttcct tgacgatgtc
     3061 gaggccgagg ccgctgcccg gggtcttttc gtcgagacgg acgccgcggc gcaacacttt
     3121 ggtggcttcc tcctcggtca gccccgggcc gtcgtcctcg acgcggatca gcagcatctg
     3181 ctgggtggcg ccgcgctcgg ccatcatggt gacggcgatc ttgcccttgc tccacttgca
     3241 ggcgttgtcg agcaggttgc ccgccatctc ctcgaggtcg ccctcgtcgc cgcggaacca
     3301 gggcagcgag gcatcgggcc gcttgaaggc gatggtgacg tgcttgttga gcttttccat
     3361 cacccgcacc agccgcagca tgaccatggt ggcgtcggcg cgcttgccga ccacggcgct
     3421 gcgggcggca atgcgggcgc ggtcgagata ggtggtgacc agctgcgtca tcttctcgga
     3481 ctcggacgcc accaccttgc ccagcggggt gtcccgggca gttgccgcct cgttgcgcag
     3541 caccgccagc ggcgtcttca ggccatgcgc gaggttgccg acctggctgc gggcccgctc
     3601 gatgatctgg gtgttggagc gcagcagctc gttgacctcc tcggccagcg gcgcgatctc
     3661 gcgcggatag gtgccggtga tggtctcggt ctcgccctcg cgcacctgct cgatcgcccg
     3721 gctcagccgg ccgatggggc ggagcgccag gcgcgcgacg atgccgctca tgatcgccag
     3781 cgcgatgccg acggcgccga gcacgatcag cgtctggccg cgaaactggc tgaccagcga
     3841 ctggctctcg tcgaggctgc cggtgacggt gatgccgagc ggccgcccgt cgctggtggt
     3901 cgaacgctcg atgacccgca tgtggttgcc ctggtcgtcg gtgagcagag cggtgcggta
     3961 attgtcggca tcgaaggtgc cgctcagcgc cggcgccacc atgccgacca tcgagcgcga
     4021 attggccagg atgttgcccg ccgcgtcgcg gatgatccag tagaagccgg tcgcggcgcg
     4081 gctgaagcgc gggtcgggca ggccgacgtc ggcgaggtgc ggatcggtcg aatcgaggac
     4141 gttgctcgac agcgtgtcga tgtcgaactt cagctggttg gtgagattgg tgtcgagcgc
     4201 ccgcgaatag agttcggtca gcaggaacgc cgttccggcg agggccacga tcagccagcc
     4261 ggccgacagc cagaacagcg cgaaggtgat cgagcccttg cgcaccgcgg cgctagtcct
     4321 cgaggatctg gtagcccagc ccgcgcacgg tgtggatcac ctcttccggc agcttcttgc
     4381 gcagccggcc gacgaacacc tcgatggtgt tggagtcgcg gtcgaaatcc tggtcgtaga
     4441 ggtgctcggt gagctcggtg cggctcacca ccttgccctt gtggtgcatg aggtagctga
     4501 ggagccgcaa ttcgtggctg gtgagcttga tcgcctggcc gtcgacggtg accttgccgg
     4561 ccttgacgtc gagccgcacg gggccggcgg tgatctcgtt gctggcatga ccggcggcgc
     4621 ggcggacgag cgcccggagg cgggccagca gctcctccat gtggaacggc tttgcgacgt
     4681 agtcgtcggc gccggcgtcg atgccctgca ccttgtcgct ccagcggtcg cgggcggtca
     4741 gcagcagcac cggcatcgat ttgccggcgc ggcgccactc ctccagcacc gacagcccgt
     4801 ccatctgcgg caggccgatg tccagcacca ccgcgtcgta gggctcggtg tcgccgagga
     4861 aatggccttc ctcgccgtcg aaggcgacgt cgaccgcata gccgccctcg gtcagggcgt
     4921 ccttgatctg ccggttgaga ttggtgtcgt cttcaacaac aagaatgcgc atcggcccgt
     4981 ccctccggtc gacttatagc aaatcagcgg ctgccatcta cggcattgag gaccattttg
     5041 aagttctcgc ccttgggcga gaccatgttg accatgaaat acggtacgcc gccgcgcagg
     5101 cagacctgca catccgaggt ttcataatag tccttgggga tgccggcgag ttttctgatc
     5161 ctggcccagc tctggatttg cccggagccg atttcggcct ggatctgctg gtcggacagg
     5221 caattgccct gccggggggc cgccgcggca ggcaaaacgg ccgccagcga gcagatcgcg
     5281 gcggccgtca ttgcgatgcg aatgcggcgc aggaaggtca tgttcccaca tctaggaaga
     5341 aaccgctgaa cgtcacatga atgccggttc aggaattcgt gacattggtc ttcagcccct
     5401 gccgcaggaa gaagaaggcc agcgcctcca tcaccaggct gcccggcgcc gtgccggtga
     5461 aattggggat atcgatgccg atgacgccgg cgaggccggt cagcagcatg gccgcggcga
     5521 cgatgtaggt cttgtagccg gagaggaagt ccaggttcat ttcggttttc cttggggttg
     5581 ggggtggaag agtcgtgccc gccatggcca gcgcggcggt gcggatggtg gcgacgcggc
     5641 gggtccagcc gcggccgaaa gtcgaatagg cggcgagccg ccggagccag ccgagacggc
     5701 ggtcgcagag gctgccgatg agcggggcgg cgccacggat ggcgacgcgg tcggcgatgg
     5761 cagccgcggt cttcgggccg aacagcccat cggcggcgac gcccagcagt tgctgcagcg
     5821 cccggatggc gcggggcggc ccggaattga cggcaaaatc gaacaccgcc agatccagcc
     5881 cggccggcag ctcggcgccg cggaccgggg tccagtacaa gccgcgataa atctccgccg
     5941 cctcggctcg cgtcagggcc gcgaccgcgg ctttcggcag cgccgtccac ggcgtcacct
     6001 tgcgccagga cgccagcgtc cgccgggtga tccccagatt ggtggcgccg cccggatcgc
     6061 gcggatcgtc gacatagccg ccctcgagc
//
LOCUS       DATAZA010000024         2309 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3482875, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000024 DATAZA010000000
VERSION     DATAZA010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2309
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3482875"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            79..1287
                     /locus_tag="VHZ56_00585"
     CDS             79..1287
                     /locus_tag="VHZ56_00585"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX4296496.1"
                     /translation="MVRPKTPPRPFGKPAAARQKSATSRLAIRPAVLYAGFAFLVSTN
                     VLTLIGFLMAPDIARVFSPESQSVLGAYEDRLSQLRLEVDRLQSRHYAQAGDVNLQLQ
                     ELAQQQEVLVEQHQYVKQLADKAAALGISADSLPKAANSPAPAAPASGTDDTLLTGSI
                     GGATGQAAQIAAAAASINRMMGDSQLALATLDDVASTRTNQILGTLAAVGIKPKLPGD
                     EDAEGGPLLPPLDGTETASLVDDANSVATALDQYKAALDAADIAPVHAPVQPNTRISS
                     TFGNRTDPFTGRLAFHPGIDFAAPWGTTVFAAGAGTVSFVGQINGYGNAVEITHADGL
                     VSLYGHLSSFIATVGEIVDVGTPIAHVGSTGRSTGPHLHFELRRGDNSIDPAPFLAAG
                     RVLGKIIAIT"
     gene            1468..>2309
                     /locus_tag="VHZ56_00590"
     CDS             1468..>2309
                     /locus_tag="VHZ56_00590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015317674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4296497.1"
                     /translation="MDTVAPRPQLSDRDRTVTMIGILTAMLLAALDQSIVAPAMPTIG
                     GTLGNPQYLPWIVTAYLLAATAVAPLYGRVSDIYGRRPTLYAALGLFLFGSLIAALSP
                     NIFVLIGARAVQGLGGGGLFALSQILIGDMLPPRERGRYAAWISGMWAVAGIAGPLLG
                     GTLAEFYWPSIFWLNLPLGALALFVINGPLKKLAVATHPHRLDIPGAVLLIFATSTLL
                     LMLNWAGSAYPWASPQIIGLGVLSVLFWIGFGIRIARAAEPLVSFEVLGNPVVLAACF
                     GMFLV"
BASE COUNT          317 a          873 c          725 g          394 t
ORIGIN      
        1 cgttagagct tcttttccgc cgcattaacc ttaacggacc atgattttcc ggatcgcagt
       61 agtatccggg agttgctcgt ggtgcgtccc aagaccccgc ccaggccctt cggcaagccg
      121 gcggcggcgc gccagaaatc cgcgacctcc cgcctcgcga tccgccccgc cgtgctctat
      181 gccggctttg cctttctcgt ttccaccaac gtcctgacgc tcatcggctt cctcatggcg
      241 ccggacatcg cgcgggtgtt ttcgcccgag agccagtcgg tgctgggggc gtacgaagat
      301 cggctgtcgc agctgcgcct cgaggtcgat cgcctgcaat cgcggcacta cgcgcaggcc
      361 ggcgacgtca acctgcagtt gcaggaactg gcgcagcagc aggaagtgct ggtcgagcag
      421 catcagtacg tcaagcagct ggcggacaaa gcggctgccc tcggcatcag cgccgacagc
      481 ctgcccaagg ccgcgaactc gccggctccc gcggcgcccg cctccggcac cgacgacacg
      541 cttctcaccg gctcgatcgg cggcgccacc ggccaggccg cgcagatcgc cgccgcggcg
      601 gcgagcatca accggatgat gggcgattcg cagctggcgc tagcgacgct cgacgacgtc
      661 gcgtccaccc gcaccaacca gatcctgggg acgctggcgg cggtcggcat caagccgaaa
      721 ctgccgggcg acgaggacgc cgaaggcggt ccgctgctgc cgccgctcga cggcaccgag
      781 accgcgtcgc tggtcgacga cgccaattcg gtcgccaccg ccctcgacca gtacaaggcg
      841 gcgctcgatg ccgccgacat cgccccggtg cacgcgccgg tgcagcccaa tacgcggatc
      901 agctcgacct tcggcaaccg caccgatccc tttactggac ggctcgcctt ccatccgggc
      961 atcgacttcg cggcgccctg gggcacgacg gtgttcgccg ccggcgccgg cacggtcagc
     1021 ttcgtcggcc agatcaacgg ctacggcaac gccgtcgaga tcacccacgc cgacggtctc
     1081 gtcagcctct acgggcatct gagctcgttc atcgcgacgg tgggcgagat cgtcgacgtc
     1141 ggcacgccga tcgcgcatgt cggctcgacc ggacgctcga ccggcccgca cctccacttc
     1201 gagctccgcc gcggcgacaa ttccatcgat ccggcgccgt tcctcgccgc cggccgggtg
     1261 ctcggcaaga ttatcgccat cacctagcgc ccgctgcgcc gggccggttg acggcgctgc
     1321 cgcgctggcc tagagcggcc ggcgctgggt ccgtatccgc gactccccga cggcagtcct
     1381 gccgccattt ttttcatccg ggccaacgca ctgcattccg gcttgccgcc ggcggctccg
     1441 cgccctgttc gagacggaat tccaacaatg gatacggtgg ccccacgtcc ccagctgagc
     1501 gatcgcgacc gcacggtcac gatgatcggc atcctgaccg ccatgctgct ggcggcgctc
     1561 gatcaatcga tcgtcgcgcc ggcgatgccg accatcggcg gcaccctggg caatccgcag
     1621 tacctgccgt ggatcgtcac cgcctacctg ctggccgcga ccgccgtcgc gccgctctat
     1681 ggccgggtct ccgacatcta cggtcgccgg ccgacgctct acgcagcgct cgggctgttt
     1741 cttttcggct cgctgatcgc ggcgctgtcg cccaacatct tcgtgctcat cggcgcccgc
     1801 gccgtacagg gcctcggcgg cggcggcctg ttcgcgctgt cgcagatcct catcggcgac
     1861 atgctgccgc cccgcgaacg cggacgctac gccgcgtgga tctcggggat gtgggccgtt
     1921 gccggcatcg ccggcccgct gctcggcggc accttggccg agttctactg gccgtcgatc
     1981 ttctggctca acctgccgct cggcgccctg gcgctgttcg tcatcaacgg cccgctcaag
     2041 aagctcgcgg tcgccaccca cccgcaccgg ctggacatcc ccggggccgt gctgctgatt
     2101 ttcgccacct cgacgctgct gctgatgctc aactgggccg gctcggccta cccctgggcg
     2161 tcgccgcaga tcatcgggct gggcgtcctg tcggtgctgt tctggatcgg cttcggcatc
     2221 cgcatcgcgc gcgccgccga accgctggtg tcgttcgagg tgctgggcaa ccccgtggtg
     2281 ctcgccgcct gcttcggcat gttcctcgt
//
LOCUS       DATAZA010000025         3118 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3947319, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000025 DATAZA010000000
VERSION     DATAZA010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3118
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3947319"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2268
                     /locus_tag="VHZ56_00595"
     CDS             <1..2268
                     /locus_tag="VHZ56_00595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011982388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 dependent-methionine synthase
                     activation domain-containing protein"
                     /protein_id="HEX4296498.1"
                     /translation="FDEQGQADTEARKVEICTKAYKLLTEEVGFPPEDIVFDPNIFAV
                     ATGIDEHRNYGVDFINATRRITETLPHVHISGGVSNLSFSFRGNEPVREAMHAVFLYH
                     AIQAGMDMGIVNAGQLAVYESIEPGLREACEDVILNRRDDATERLLELAERYKGGAAQ
                     EGKAKDLTWRTKPVAERISHALVNGITEFIDEDTETARLEAARPLEVIEGPLMSGMSV
                     VGDLFGSGKMFLPQVVKSARVMKQAVAHLLPYMEAEKDADGNAQGVKSAGKILMATVK
                     GDVHDIGKNIVGVVLSCNNYQIIDLGVMVPTQKILETARRENVDVIGLSGLITPSLDE
                     MVHVASEMEREGFDIPLLIGGATTSRVHTAVKIHPQYTHGPTVHVHDASRAVGVVSAL
                     LSKEQRPAYVADIKAEYQKVAARHAESEAAKQRLPLSVARENGFKTDWANYVPPKPSF
                     LGTRVFENYDLHDLARYIDWTPFFQAWEMKGRYPAILEDKDQGPAARQLWDDAQAMLR
                     EVLQKNWFRPKAVIGFWPANAVGDDIRIYTDDSRTEELATLFTLRQQLSKQKDKPNLA
                     LADFVAPVGVPDYVGSFVVTAGLEEQLIAERFERKNDDYSAIVIKALADRFAEAFAEA
                     LHERVRKEFWGYAADEAIAPDELIQEKYRGIRPAPGYPAQPDHTEKTTLFRLLNARQR
                     IGVELTESYAMWPGSSVSGLYLSHPGAYYFGVAKVERDQVDDYARRKGMSVREVERWL
                     GPVLNYTPVAEKAGS"
     gene            2265..2621
                     /locus_tag="VHZ56_00600"
     CDS             2265..2621
                     /locus_tag="VHZ56_00600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296499.1"
                     /translation="MSNPFEPLPASVPVTVLTHGPLPAEPGARMLHLEPALHDHPPGG
                     ECVACAARGDIRAMLFDLLQASRSDRRPLTSVVVDASDLKDPQAIIDRLEAGKLPAFG
                     LRDHTVARSFHLARVV"
     gene            complement(2689..>3118)
                     /locus_tag="VHZ56_00605"
     CDS             complement(2689..>3118)
                     /locus_tag="VHZ56_00605"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEX4296500.1"
                     /translation="NFKSLNDTYGHQVGDEVLRIVGRALLAAARPGDIVGRTGGDEFV
                     VAFPGAGLAVATALAERLRRAIAESDLRTALGPGVLGGITASFGVAVRVAGDSIVTLV
                     GRADRCLYAAKHQGRNRVVSEAQPDDPEEATPPLRAQAAG"
BASE COUNT          533 a         1073 c         1060 g          452 t
ORIGIN      
        1 ttcgacgagc agggccaggc cgacaccgag gcgcgcaagg tcgagatctg cacgaaagcc
       61 tacaagctgc tgaccgagga ggttggcttc ccgcccgagg acatcgtctt cgatcccaac
      121 atctttgcag tggcgaccgg catcgacgag caccgcaatt acggcgtcga tttcatcaac
      181 gccacgcggc gcatcaccga gacgctgccg catgtccaca tctcgggggg cgtgtccaac
      241 ctcagcttct cgttccgcgg caacgagccg gtgcgcgagg cgatgcacgc ggtgttcctc
      301 taccacgcca tccaggcggg catggacatg ggcatcgtca acgccggtca gctcgcggtg
      361 tacgagtcga tcgagccggg cctgcgcgag gcctgcgagg acgtgatcct caaccgccgc
      421 gacgacgcca ccgagcggct gctcgagctg gccgagcgct acaagggcgg cgcggcgcag
      481 gagggcaagg ccaaggacct gacgtggcgc acgaagcccg tggccgagcg gatttcccac
      541 gcgctggtca acggcatcac cgagtttatc gacgaggaca ccgagaccgc ccggctcgaa
      601 gctgcgcggc cgctcgaagt catcgagggt ccgctgatga gcggcatgag cgtcgtcggc
      661 gacctcttcg gctcgggcaa gatgttcctg ccgcaggtgg tgaagtcggc gcgcgtgatg
      721 aagcaggcgg tggctcacct cctgccctac atggaggccg agaaggacgc cgacggcaac
      781 gcgcagggcg tgaagtcggc cggcaagatc ctgatggcga cggtcaaggg cgacgtgcac
      841 gacatcggca agaacatcgt cggggtcgtc ctcagctgca acaactacca gatcatcgat
      901 ctcggagtga tggtgccgac gcagaagatc ctcgagacgg cacggcggga gaacgtcgac
      961 gtcatcgggc tcagcgggct gatcacgccg tcgctcgacg agatggtgca tgtcgcctcc
     1021 gagatggagc gcgaagggtt cgacatcccg ctgctgatcg gcggggcgac gacctcgcgc
     1081 gtccatacgg cggtgaagat ccatccgcag tacacgcatg gccccaccgt ccacgtgcat
     1141 gacgccagcc gcgccgtggg cgtggtgtcg gcgctgctca gcaaggagca gcggccggcc
     1201 tacgtcgccg acatcaaggc ggaataccag aaggtggcgg cgcggcacgc cgagtccgag
     1261 gccgccaagc agcgcctgcc gctgagcgtg gcgcgcgaga acggcttcaa gaccgactgg
     1321 gccaactacg tcccgccaaa gcccagcttc ctcggcaccc gcgtgttcga gaattacgac
     1381 ctgcacgatc tcgcccgcta catcgactgg acgccgttct tccaggcctg ggagatgaag
     1441 ggccgctacc cggcgatcct cgaggacaag gaccaggggc cggcggcgcg ccagctctgg
     1501 gacgatgcgc aggcgatgct gcgcgaggtg ctgcagaaga actggttccg gcccaaggcc
     1561 gtgatcggct tctggcccgc caatgccgtc ggcgacgaca tccggatcta caccgacgac
     1621 agccggaccg aggagctggc gacgctcttt acgctccgcc agcagctcag caagcagaag
     1681 gacaagccca acctggcgct cgccgacttc gtcgcgcccg tcggcgtgcc cgactatgtg
     1741 ggctcattcg tcgtcaccgc ggggctcgag gagcagctca tcgccgaacg cttcgagcgc
     1801 aagaacgacg actattcggc gatcgtcatc aaggctctcg ccgaccgctt cgccgaggct
     1861 tttgcggaag ccctgcacga gcgcgtgcgc aaggaattct ggggctatgc agcggacgag
     1921 gcgatcgcgc cggacgaact gatccaggag aaatatcgcg gcatccggcc ggcccccggc
     1981 tacccggcgc aaccggacca caccgagaag acgacgctgt tccgcctgct caacgccagg
     2041 cagcggatcg gcgtcgagct caccgagagc tacgcgatgt ggccgggctc gtcggtgagc
     2101 ggcctctatc tcagccaccc gggcgcctac tatttcggtg tcgccaaggt cgagcgcgac
     2161 caggtcgacg attacgcccg gcgcaagggc atgtcggtgc gcgaggtcga gcgctggctc
     2221 gggccggtgc tcaactacac gccggtggcg gagaaggcgg ggtcgtgagc aaccccttcg
     2281 agccgcttcc ggcttccgtt cccgtcaccg tgctgacgca cggccccctc cccgccgaac
     2341 ccggcgcgcg gatgctgcat ctcgagccgg cactgcacga tcatccaccg ggcggcgagt
     2401 gcgttgcctg cgcggcgcgc ggcgacatcc gggccatgct gttcgacctg ctgcaggcct
     2461 cgcgatccga tcggcggccg ctgacctcgg tggtggtcga tgcctcggac ctcaaggacc
     2521 cgcaggcgat catcgaccgg ctggaagccg gcaagctccc ggccttcggc ctgcgcgacc
     2581 acacggtggc ccgcagcttc catctggcaa gggtggttta gccttcggct gaattgcgtg
     2641 gcgcgagggc acgcaacccg gcgcgaccgt tggtcccggc gacggcccct atccggccgc
     2701 ctgcgcgcgc agcggcgggg ttgcctcctc ggggtcgtcc ggctgcgcct ccgacaccac
     2761 gcggtttcgc ccctggtgct tggccgcata gaggcagcgg tcggcgcggc cgaccagtgt
     2821 cacgatgctg tcgccggcca ccctgacggc gacgccgaac gaggcggtga tgccgcccag
     2881 cacccccggc ccgagcgcgg tgcgcagatc gctctcggcg atcgcgcgcc ggagccgttc
     2941 cgccagcgcc gtggcaacgg ccagtccggc gcccggaaac gccaccacga actcgtcgcc
     3001 gccggtgcgg ccgacgatgt cgcccgggcg ggcggcggcg agcagcgccc gcccgacaat
     3061 gcgcagcact tcgtcgccca cctggtgccc gtaggtgtcg ttgagcgatt tgaaattg
//
LOCUS       DATAZA010000026         3384 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2554694, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000026 DATAZA010000000
VERSION     DATAZA010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3384
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2554694"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..330)
                     /locus_tag="VHZ56_00610"
     CDS             complement(<1..330)
                     /locus_tag="VHZ56_00610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX4296501.1"
                     /translation="MASMNGMVLAQDMPTKIGPGEGQLNIIAWVGYVEAGQDDPNYDW
                     VTDFTKATGCKVNVKTAATSDEMVTLMNTGGFDLVTASGDASLRLVAGKKVVPVNLDL
                     IPSWSTVD"
     gene            complement(468..998)
                     /locus_tag="VHZ56_00615"
     CDS             complement(468..998)
                     /locus_tag="VHZ56_00615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020179185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296502.1"
                     /translation="MADGKDLHPALRALRAVGRALAVVLVAIWAILYELLFPIFRPLV
                     RWLSGLRLFAFIGAVISRSPPYLVLLMLAVPFVVLEPLKVFALYWIAVGHVVQGTVLL
                     IFAHVLSIFTLDRIYHTGHGQLMRIGWFARLMGWVVELRNWALGWVTRTPAWRSLMRF
                     TQSIRTWFRGLAGSPR"
     gene            1165..>3384
                     /locus_tag="VHZ56_00620"
     CDS             1165..>3384
                     /locus_tag="VHZ56_00620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003506029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEX4296503.1"
                     /translation="MSIKAAIYHLTHYIYDRPVILAPQIIRLKPAPHSKTRVLSHSLK
                     VFPARHFVNLQQDPYGNWLSRHVFPEPVTEFKIEVDLVADMTVYNPFDFFVEEEANIW
                     PFRYPESLQDDLSIYMRPEPAGPLLTGFLNAVDRTPRNTVDFVIELNALVQSRIGYIV
                     RLETGVFEPEETLALGQGSCRDSGWLLVQMLRHLGLAARFVSGYLIQLKPDLVSLDGP
                     PGTDHDFTDLHAWCEVYLPGAGWIGLDPTSGLLTGESHIPLAATPHYRNAAPISGSFS
                     ATGPVHTDFAFDMKVTRVAEHPRITKPFSDESWARLNALGHSVDSVLQQNDVRLTMGG
                     EPTFVSIDDFESGEWNTDAVGPTKRDRADALIRRLRERLAPGGLLHHGQGKWYPGETL
                     PRWTFSLFWRRDGKPVWRDEKLAAGEAEKTPATDSDAKVFLDSFAENLGLSGDTVDAA
                     YEDPGEWLLKEANLPANVDPANSELADAEARSRMAKVFEHGLTRPTGYVLPVQRWNAL
                     AATSHWVSEKWKTRRGKLFLAPGDSPAGYRLPLSALKHIPATSYPHVVPRDPLQPVGE
                     LPEPEQILRAKTQPLASFTADAGNQQDRAEQVISEIEGEVRTAVTVEVRDGHLCVFLP
                     PVEALEDYLELVAAAEESARALGLPVLLEGYPPPADPRLNVIRVAPDPGVIEVNIHPA
                     ANWDEAVATTTIVYEEARQSRLGADKFMIDGKHVGTGGGNHVVVGGATPSDSPFLRRP
                     "
BASE COUNT          591 a         1204 c         1079 g          510 t
ORIGIN      
        1 gtcgaccgtg ctccagctcg ggatgagatc gagattgacc ggcaccacct tcttgcccgc
       61 caccagccgc agcgacgcat cgccggaggc ggtgacgaga tcgaagccgc cggtgttcat
      121 cagcgtcacc atctcgtccg aggtcgccgc cgtcttgacg ttgaccttgc agccggtggc
      181 cttggtgaaa tcggtgaccc agtcgtagtt gggatcgtcc tggcccgcct cgacgtagcc
      241 cacccaggcg atgatgttca gctggccctc gcccggcccg atcttggtcg gcatgtcctg
      301 cgccagcacc atgccgttca tcgacgccat ggcggccagc gcgatacccg cgcggaaaat
      361 cgatttcata acgcttctcc ccaaatcggg accgcgcagt ccggacgcgg ccggcccctg
      421 aaaagtggag cctagcgcgg cccggcagaa ccgccaaggg cagccggcta gcggggcgag
      481 cccgccagcc cccggaacca cgtccgtatg ctctgggtaa agcgcatcag cgagcgccag
      541 gccggcgtcc gcgtcaccca gcccagcgcc cagttgcgca gctcgactac ccatcccatc
      601 agccgcgcga accagccgat ccgcatcagc tggccgtggc cggtgtggta gatgcggtcg
      661 agcgtgaaga tgctgaggac atgggcaaaa atcagcagca cggtgccctg gacgacgtgg
      721 ccgacggcga tccagtagag cgcgaacacc ttcagcggct cgagcacgac gaacggcacg
      781 gccagcatca gcagcaccag atagggcggc gaccgcgaga tcaccgcgcc gatgaaggcg
      841 aacaggcgca gccccgacag ccagcgcacc agcggccgga agatcggaaa cagcagctcg
      901 tagaggatcg cccagatcgc gacgagcacg acggccaggg cacggcctac cgcgcgcagt
      961 gcccgcagcg ccggatgcag atctttgccg tccgccatgt tccgccctcg cctcacccgc
     1021 cgccggcgac agatttagga tggtccgccc ggttctgcga ggcctcggga cggaaaatcc
     1081 gccacaccca agaggctggc cgcacggtga tttcctgcta aggtcggctc gggaagccct
     1141 gttgcgtacg aggatgagcc gactttgtcg atcaaagccg cgatctatca cctgacgcac
     1201 tacatctacg accgcccggt catcctcgct ccgcagatca tccgcctgaa gccggcgccg
     1261 cactccaaga cccgcgtgct gagccactcg ctgaaggtct ttccggccag gcacttcgtc
     1321 aacctgcagc aggaccccta cggcaactgg ctgagccggc acgtctttcc cgagccggtg
     1381 accgagttca agatcgaggt cgacctcgtc gccgacatga cggtctacaa tccgttcgat
     1441 tttttcgtcg aagaagaagc gaacatatgg cctttccggt acccggaatc gctgcaggat
     1501 gacctttcca tctacatgcg gcccgaaccg gccggaccgc tgctgaccgg cttcctgaac
     1561 gccgtcgacc gcacgccgcg caacaccgtc gacttcgtca tcgagctgaa cgcgctggtg
     1621 cagagccgca tcggctacat cgtccggctg gaaaccgggg tgttcgagcc cgaggagacg
     1681 ctggcccttg gccagggctc gtgccgcgac tccggctggc tgctggtcca gatgctgcgc
     1741 catctcggcc tcgccgcccg cttcgtctcc ggctacctga tccagctcaa gcccgacctg
     1801 gtctcgctcg acgggccgcc cggcaccgac cacgatttca ccgacctcca cgcctggtgc
     1861 gaagtgtacc tgccgggcgc cggctggatc gggctcgatc cgacctccgg cctgctgacc
     1921 ggcgagagcc acatcccgct cgccgcgacg ccgcactatc gcaacgccgc gccgatctcc
     1981 ggcagcttct cggcgaccgg cccggtccac accgacttcg ccttcgacat gaaggtgacg
     2041 cgggtcgccg agcacccgcg catcaccaag ccgttctccg acgaaagctg ggcccggctc
     2101 aatgccttgg gccactcggt tgattcagtg ctgcagcaga acgacgttcg cctgaccatg
     2161 ggcggcgagc cgaccttcgt gtcgatcgac gatttcgaga gcggcgagtg gaacaccgac
     2221 gccgtgggtc cgaccaagcg ggatcgcgcc gacgcattga tccggcggct gcgcgagcgg
     2281 ctggcgccgg gtggcctgct gcaccacggc cagggcaagt ggtatccagg ggaaaccctg
     2341 ccgcgctgga ccttctcgct gttctggcgg cgcgacggca agccggtctg gcgcgacgaa
     2401 aagctggctg cgggcgaggc cgagaaaacc ccggcaacag actcggatgc caaggtattc
     2461 ctcgacagct tcgcagagaa cctcgggctc tccggcgaca ccgtcgatgc cgcctatgaa
     2521 gaccccggcg agtggctgct gaaggaggcg aaccttccgg ccaatgtcga tcccgccaac
     2581 tccgagctcg ccgacgccga ggcccgctcg cgcatggcca aggtgttcga gcatggcctg
     2641 acgcgcccga ccggctacgt gctgccggtg cagcgctgga acgccctggc ggcgacgtcg
     2701 cactgggtca gcgagaaatg gaagacacgg cgcggcaagc tgtttctcgc ccccggcgac
     2761 tcgccggccg gctaccggtt gccgctgagc gcgctgaagc acattccggc caccagctat
     2821 ccgcacgtcg tgccgcgcga tccgctgcag ccggtcggcg agctgcccga gcccgagcag
     2881 atcctgcgcg cgaaaaccca gcccctggcg tcgtttaccg ccgatgccgg caaccagcag
     2941 gatcgcgccg agcaggtgat ctcggagatc gagggagagg tgcgcaccgc agtgaccgtc
     3001 gaggtgcgcg acggccacct ctgcgtcttc ctgcccccgg tcgaagcgct ggaggactat
     3061 ctggagctcg tcgccgctgc cgaggaatcg gcccgggctc ttgggctgcc ggtgctgctc
     3121 gagggctatc cgccgccggc cgatccgcgc ctcaacgtca tccgcgtggc gcccgatcca
     3181 ggggtgatcg aggtcaacat ccaccccgcc gccaattggg acgaggccgt ggcgacgacc
     3241 acgatcgtct acgaggaggc ccggcagagc cggctcggcg ccgacaagtt catgatcgac
     3301 ggcaagcatg tcgggaccgg cggtggcaac cacgtggtgg tcgggggcgc aacgccctcg
     3361 gactcgccgt tcctgcgccg gccg
//
LOCUS       DATAZA010000027        10865 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1162266, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000027 DATAZA010000000
VERSION     DATAZA010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 10865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10865
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1162266"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(47..334)
                     /gene="ihfB"
                     /locus_tag="VHZ56_00625"
     CDS             complement(47..334)
                     /gene="ihfB"
                     /locus_tag="VHZ56_00625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020175100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006417 - regulation of translation
                     [Evidence IEA];
                     GO_process: GO:0075713 - establishment of integrated
                     proviral latency [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HEX4296504.1"
                     /translation="MIKSELVEKLADENPHLFQRDIENIVNAILDEVGNAMARGDRVE
                     LRGFGAFSVKRRDARLGRNPRTGDSVQVTEKHIPFFKTGKQLRDRLNQLDG"
     gene            complement(377..1318)
                     /gene="sppA"
                     /locus_tag="VHZ56_00630"
     CDS             complement(377..1318)
                     /gene="sppA"
                     /locus_tag="VHZ56_00630"
                     /inference="COORDINATES: protein motif:HMM:TIGR00706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HEX4296505.1"
                     /translation="MSDPLIDPAHAIPAASALRRSRFRWRILAFVALVAAVLALAGRF
                     ATENGLSGDQIARVVIDGTIATDPTRLKLLDTLAADDSVKAVIVAINSPGGTTAGGEE
                     LYTALGRVRAKKPVVAVIKELGASAAYMTAIAADRIFAERLSIVGSIGVLFETYNAGK
                     LLDTIGIGADKVASGPLKAEPDITHPMSADVRASLQSVVDDSFSWFVDIVAERRGMSR
                     ADVLPLADGRILTGNQALGDKLIDEVGGEDEAIAWLDKTKGIKANLPVTTRYPTAQPG
                     WAGIGRWLGGEARGALGLPADGPIALDGLVSLWQVGP"
     gene            complement(1375..1884)
                     /locus_tag="VHZ56_00635"
     CDS             complement(1375..1884)
                     /locus_tag="VHZ56_00635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4296506.1"
                     /translation="MPLKLPGVAWRTLTGYDMPAVEAIAAAVHPHFFESLEVLSERQS
                     LYFHGAYLLEVNERPAGYLLSHPWRLGDLPPLNTLLESLPAGADTYYIHDLALLPVAR
                     RIGAASFITEALAKHARAQGFATMSLVAVNNSQGFWERHGFAVEDRPDLATKLRSYEP
                     AARLMLRRL"
     gene            complement(1988..3778)
                     /gene="rpsA"
                     /locus_tag="VHZ56_00640"
     CDS             complement(1988..3778)
                     /gene="rpsA"
                     /locus_tag="VHZ56_00640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEX4296507.1"
                     /translation="MRRPCAPDRLALQGDGPASTHTNRRARLEKSLATQAAVKEDFES
                     LLMDSFMENEPMEGAVVKGIVVAIEKDLAIIDVGLKTEGRIALKEFGQAGRDGTIKVG
                     SEVEVYVDRVENAVGEAVLSREKARREESWVKLEEMYNANQRVEGIIFNQVKGGFTVD
                     LEGAVAFLPRSQVDIRPIRDIGPLMNVPQPFQILKMDKRRGNIVVSRRAILEESRAEQ
                     RSEIVQQLEEGQIVDGVVKNITDYGAFVDLGGIDGLLHVTDIAWRRVNHPTEVLSIGE
                     TIKVQIIRINHESHRISLGMKQLQADPWEGIEAKYPVSAKFTGRVTNITDYGAFVELE
                     PGIEGLIHVSEMSWTKKNVHPGKIVSTSQEVEVMVLEVDPDKRRISLGLKQTLANPWE
                     TFAEKFPIGSTIEGEVKNKTEFGLFIGLDGDVDGMVHLSDLDWQKPGEQALDEYNRGD
                     VVKAKVLDVDVEKERISLGIKQLATGDEKDSSGDGLRKGSVVTGTVTEVNDGGIEVRI
                     ADSEMTAFIRRADLSRDRNDQRPERFSKGEKVDARVTQYDRKTGKIALSIKALEIAEE
                     KEAVAAYGSSDSGASLGDILGAALKDREKK"
     gene            complement(3858..4499)
                     /locus_tag="VHZ56_00645"
     CDS             complement(3858..4499)
                     /locus_tag="VHZ56_00645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HEX4296508.1"
                     /translation="MIIAVDGPAASGKGTLAAGLAAHYRLPHLDTGLLYRAVGLAAGE
                     ALGTDGFEAAAIAAARALDAADLGDRERLLSPEAGSLASKVAVLRPVREALFAAQRQF
                     ALQPGGAVLDGRDIGTTIAPDADVKLFMEADSKSRMERRARQLERRGAAVDRYALYHQ
                     IEERDARDRANPNGGFYPAADAHLLDTTRLDIEAALRAAVAIVDGVMVRKKAP"
     gene            complement(4496..5797)
                     /locus_tag="VHZ56_00650"
     CDS             complement(4496..5797)
                     /locus_tag="VHZ56_00650"
                     /inference="COORDINATES: protein motif:HMM:NF012497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296509.1"
                     /translation="MIPASSSTHPLAAERSPWLRGPIRVPAAPSVSAAALLLAAMARG
                     ESVLDNLDAGPGTAAVMELLPRLGARLDRHGERIHVQGIGVGGFLAPEAPIDLPPLGE
                     AGLLVLALLAAHDFETRFTGCMAAPMTDALLDFLQRNGSRIGRHGTDLVTRAPRFGLP
                     LDLALPPGAGPLALPFLLQALVTTGTSVLQTPETGSAAEALLAGFGGRLAATPGDDAT
                     RLAVEGMAPLRAQALSLPADPGLAAYPAVAALIAPDSEITVPGLALDHDRMALLDALQ
                     MLGGDIRLDPAERGAGVDLRIVHGPLTGTVIPAALGIAPEDFAILAVAAAFASGETLI
                     EGLGHGARRLTLSRALRANGVDCEERAEGLAVRGARRVPGGGSVAVRLDPRLAMAFLV
                     LGMGADRPVTIDDGEVMAQLFPGFVASFEHVGASFAAGGAA"
     gene            6088..6498
                     /locus_tag="VHZ56_00655"
     CDS             6088..6498
                     /locus_tag="VHZ56_00655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006204003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02300 family protein"
                     /protein_id="HEX4296510.1"
                     /translation="MAKDIRGTKREDPETGKKFYDLNRDPIVSPYTGKSYPRSYFEQN
                     AVRKAGAERDEEPDEEEEAEVPEAAPAAAAEEPEVISLEDADAEEAGGEEEIPEVEGV
                     EEAEDIGEDDADVFLEEDEEEDENLDFDTGSDER"
     gene            6587..6662
                     /locus_tag="VHZ56_00660"
     tRNA            6587..6662
                     /locus_tag="VHZ56_00660"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6620..6622,aa:Ala,seq:ggc)
     gene            6829..7788
                     /locus_tag="VHZ56_00665"
     CDS             6829..7788
                     /locus_tag="VHZ56_00665"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HEX4296511.1"
                     /translation="MLRHYGMLLATIGFALIGGAAMADDWTAVQLRGQVMQFVDKSWQ
                     PVQRGDVVADETMVRTSNNGHADFVRGEETVSLDPNTEITIHDKPTGNGKPYTTVSQY
                     FGTVSVEAEVQHVQHFSVETPYLAAVVKGTKFTVVSSHAGSRVSVERGHVQVTDFAHH
                     TATLISAGQSASIGASGPSSAGLVVSGAGVLPPVTGGAGTAAVGLLPGVGSTVTSTVG
                     LVGSTLDTTVGAVGSTVDTTVGFVGSTVGSVGSTVETTVGTVTSTVSDVTSTVDGVVG
                     GVVGGVLGGHSDNGTGNDGQSGTGQQHNNGNGGLVGSLLHHLL"
     gene            7798..10164
                     /locus_tag="VHZ56_00670"
     CDS             7798..10164
                     /locus_tag="VHZ56_00670"
                     /inference="COORDINATES: protein motif:HMM:NF017076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX4296512.1"
                     /translation="MARLAAGRSRFWPALALWAAIGVAAWAGWFAPLDNALREARFHL
                     TTRGTSGSAVFVDIDAQSLATVGVWPWPRHLYAQMLDKLMQLGAADVVFDVDFSAASS
                     ETEDAAFERSLADAGGYAFLAAFQQQREAGGSQPFNLPLARFLKNAAPVAVNVSLDGG
                     GVVRDTPLAVSIGGRPIASAAATLAQVKGAPGQSVGIDFSIDPGSIVRVSAADLLAGK
                     VDPALLANRQVVIGASAVELRDFFVVPRYGIVPGAVLQILAAETLKQGRGLVSLGPWP
                     ALMALLLIAGAGLAGRRRVPVAVTIGAATALAVAIEIAASLLQVEWALLLDSAAIDAG
                     LGVLALQALVGELKRRGELKRVAEERLRYLAEHDPLTGALSRTSVVEYIAAELAARHE
                     LAVVAIDLRRFRAINDTLGHSRGDELLKQVVQRLSTMGPDVVARLGADSFVVVAPATT
                     PDRLLGYCEAITEWLAFPYELDADHQATIAASAGATLSVVSGHDPEMLLSHADMALSA
                     AKQRTGHGAALFATEMAGRLKASRALDAALRQAVVKQEFTLLYQPQADLGSGRIVGAE
                     ALARWTHPTLGTIPPVTFIAAAEETGLIVDIGRWVLETACREAAGWPDEVRIAVNVSP
                     VQFELSDVAADVAAALEHSGLAPERLDIEITEGVFVRNAVTVTHKLDAVRALGVGIAL
                     DDFGTGYSSLGYLGQLPIDKLKIDQSFVRRLPGDAEAVAIIKAVMALSTALGKSVVAE
                     GIETMEQAAILRGFGCSVMQGYQFGRPMPATAIRARFDTRLLAFGRAG"
     gene            complement(10170..>10865)
                     /locus_tag="VHZ56_00675"
     CDS             complement(10170..>10865)
                     /locus_tag="VHZ56_00675"
                     /inference="COORDINATES: protein motif:HMM:NF024676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HEX4296513.1"
                     /translation="KLLAALPADWQSEATRMSSRFHLDPRGWFHTGPRPEFLKLVAEA
                     VWTARRVLIRYDSWTQVSERVVEPLGLVLKGGVWYLVGQREAGFRTYRLTQIQALTLL
                     DEPFERPADFDLPRHWQTATASFEREIYVGVARVRASRIGVARLKDISQRCRDEIEAQ
                     QPVFGADGWTELDVPIEEEKWASREMTRAGAEVEVLAPASLRACMAGIVAQLARSYGL
                     LQPASDGTPVQPA"
BASE COUNT         1607 a         3541 c         4019 g         1698 t
ORIGIN      
        1 cccgggttac gtagattaca cccgggttcg gccgtcgcga tcgcggtcag ccgtcgagtt
       61 gattcaagcg gtcgcgcaat tgctttcccg tcttaaaaaa cgggatgtgc ttttccgtga
      121 cctggacgct gtcgccggtg cgcggattgc ggccgaggcg ggcgtcgcgg cgtttcaccg
      181 aaaaggcgcc gaagccgcgc agctcgaccc ggtcgccgcg cgccatggcg ttgccgacct
      241 cgtcgaggat ggcgttgacg atgttctcga tgtcacgctg gaacaggtgc ggattctcgt
      301 ctgcaagctt ttcaaccagt tcagacttga tcatgccgcc ctccgggcgt tcctcgaaag
      361 gaaaggccgt cccccgtcag gggccaacct gccaaagcga gaccaacccg tcaagcgcga
      421 tcggcccgtc ggccggcagc ccgagcgcgc cgcgcgcctc gccgccgagc catctgccga
      481 tgccggccca gccgggctgc gccgtcgggt agcgggtggt gacgggcagg ttggccttga
      541 tgcctttggt cttgtcgagc caggcgatgg cttcgtcctc gccgccgacc tcgtcgatga
      601 gcttgtcgcc gagcgcctgg ttgccggtga ggatgcggcc atcggcgagc ggcagcacat
      661 cggcccggct catgccccgg cgttcggcga cgatgtcgac gaaccacgag aagctgtcgt
      721 cgaccaccga ctgcagcgag gcgcggacgt cggccgacat cggatgggtg atgtcgggct
      781 cggccttgag cgggccggac gcgaccttgt cggcaccgat gccgatggtg tcgagcagct
      841 tgccggcgtt gtaggtctcg aacagcacgc cgatcgagcc gacgatcgac agccgttcgg
      901 cgaagatgcg gtcggcggcg atggcggtca tgtaggcggc ggaggcgccg agctccttga
      961 tgacggcgac gaccggcttt ttggcgcgca cccggccgag cgcggtgtag agctcctcgc
     1021 cgccggcggt ggtgccgccg ggcgagttga tggcgacgat caccgccttg acgctgtcgt
     1081 cggcggcgag ggtgtccagc agcttcagcc gggtcggatc ggtggcgatg gtgccgtcga
     1141 tgacgacgcg ggcgatctgg tcgccgctga ggccgttctc ggtggcaaag cggcccgcca
     1201 gcgccaggac cgcggcgacc agcgcgacga aggcgaggat gcgccagcgg aagcgcgagc
     1261 ggcgcagggc gctggccgca ggaatggcgt gggcaggatc gatgagcgga tcggacatgg
     1321 cgggagccct cggcagagcg agggctttag cccgcgcggc ccggcattgt ccagtcagag
     1381 ccgccgcagc atcagccggg cggcgggctc gtagctgcgg agcttcgtgg cgaggtcggg
     1441 gcgatcctcg acggcgaagc cgtggcgttc ccagaagccc tggctgttgt tgacggcgac
     1501 gaggctcatg gtggcaaagc cctgggcgcg ggcgtgcttg gccagcgctt cggtgatgaa
     1561 gctcgccgcc ccgatgcggc gcgccaccgg cagcagagcg aggtcgtgga tgtagtaggt
     1621 gtcggcgccg gcggggaggc tttcgagcag cgtgttgagc ggcggcaggt cgccgagccg
     1681 ccaggggtgg ctcagcagat agccggccgg ccgctcgttc acctcgagca ggtaggcgcc
     1741 atggaagtag aggctctggc gctcgctcag cacctcgagg ctctcgaaga aatgcggatg
     1801 cacggcggcg gcaatggcct cgaccgccgg catgtcatag ccggtgagcg tccgccacgc
     1861 cacgcccgga agcttcaacg gcatcgagga atcccaaatg gaaaggcccg cacggcgagc
     1921 gcgcgggcct gcattatcca gcattgtcga gcgaacgcca ccccggctgg cgggatggcg
     1981 cctggcgtca cttcttctcg cggtccttga gcgcggcgcc gaggatgtcg ccgagcgagg
     2041 caccggaatc ggaagaaccg taggcggcga ccgcttcctt ctcttcggcg atttccagcg
     2101 ccttgatcga cagggcgatc ttgccggtct tgcgatcgta ctgggtgacg cgcgcgtcga
     2161 ccttctcgcc cttgctgaag cgctcgggac gctggtcgtt gcggtcgcgg ctgagatcgg
     2221 cgcggcggat gaacgccgtc atctcgctgt cggcgatccg cacctcgatg cccccgtcgt
     2281 tgacctcggt gacggtgccg gtgacgaccg agcccttcct gaggccatcg ccggacgagt
     2341 ccttctcgtc gccggtggcg agctgcttga tgccgaggct gatgcgctcc ttctcgacgt
     2401 cgacgtcgag caccttggcc ttgaccacgt cgccgcggtt gtactcgtcg agcgcctgct
     2461 cgcccggctt ctgccagtcg agatcgctca gatgcaccat gccgtcgacg tcgccgtcga
     2521 gaccgatgaa caggccgaac tcggtcttgt tcttgacctc gccctcgatg gtcgagccga
     2581 tcgggaactt ctcggcgaag gtttcccacg gattggcgag agtctgcttg aggccgaggc
     2641 tgatgcggcg cttgtccgga tcgacctcga gcaccatgac ctcaacctcc tgcgaggtgg
     2701 agacgatctt gccggggtgg acgttctttt tggtccacga catttcggag acgtggatga
     2761 ggccttcgat gccgggctcg agctcgacga aggcgccgta gtcggtgatg ttggtgacgc
     2821 ggccggtgaa cttggcgctg accggatact tggcctcgat gccttcccac gggtcggcct
     2881 ggagctgctt catgcccagg ctgatgcggt ggctctcgtg gttgatgcgg atgatctgca
     2941 ccttgatggt ctcgccgatc gacagcactt cggtcgggtg attgacccgg cgccaggcga
     3001 tgtcggtgac gtgcagcagg ccgtcgatgc cgccgaggtc gacgaacgca ccgtagtcgg
     3061 tgatgttctt gacgacgccg tcgacgatct ggccttcctc gagctgctgg acgatctcgg
     3121 accgctgttc ggcgcggctc tcctcgagga tggcgcggcg cgacaccacg atgttgccgc
     3181 ggcgcttgtc catcttcagg atctggaacg gctgcggcac gttcatcagc gggccgatgt
     3241 cgcggatcgg gcggatgtcg acctgcgagc gcggcaggaa ggcgacggcg ccttcgaggt
     3301 cgacggtgaa gccgcccttg acctggttga agatgatgcc ttcgacgcgc tggttggcgt
     3361 tgtacatctc ttcgagcttg acccagctct cttcgcggcg ggccttttcg cggctgagca
     3421 ccgcttcgcc gacggcgttc tcgacgcggt cgacatagac ttcgacctcg gaaccgacct
     3481 tgatggttcc gtcacggccg gcctggccga attccttgag ggcgatgcgg ccttcggtct
     3541 tcagaccgac gtcgatgatc gccagatcct tttcgatcgc aacgacgatg cctttgacga
     3601 cggcgccttc catgggttcg ttttccatga aggagtccat caggagcgac tcgaaatcct
     3661 ctttcactgc agcttgcgta gccaaactct tctccaagcg cgcccggcgg ttcgtgtgag
     3721 tggaggcggg tccatcgccc tgcaatgcaa ggcgatccgg ggcgcagggg cgccgcatcc
     3781 acgatttgag ctgaagtccg gagccggtcc ttggtcgatg gcgagggggc cggggccacg
     3841 gaagcttgaa ttgacgccta tggcgccttc ttccggacca tcaccccgtc gacaatggcg
     3901 acggctgcgc ggagtgcggc ctctatatcc aaacgggtgg tgtccagcaa gtgggcatcg
     3961 gccgccgggt agaagccgcc attgggattg gcgcgatcgc gcgcgtcccg ctcctctatc
     4021 tggtgataga gggcgtagcg gtcaaccgcg gcaccgcgcc gctcgagctg gcgggcgcgg
     4081 cgttccatgc gcgacttgct gtcggcctcc atgaacagct tgacgtcggc atcgggggca
     4141 atggtcgtgc cgatgtcgcg gccatcgagc acggcgccgc ccggttgcag cgcaaactgg
     4201 cgttgcgcgg cgaacagggc ctcgcggacc gggcggagga ccgcgacctt gctggcgagg
     4261 ctccccgcct cggggctcag cagccgctcg cggtcgccga ggtcggcagc atcgagggcg
     4321 cgcgccgcgg cgatggcggc ggcctcgaag ccatcggtgc cgagcgcttc tcccgcggcg
     4381 agcccgacgg cgcggtagag caggccggtg tcgaggtgcg gcaggcggta atgggcggcg
     4441 agcccggcag cgagcgtgcc cttgccggag gcggcgggac catcgacggc gatgatcacg
     4501 ccgcgccgcc tgcggcgaag ctggccccga cgtgctcgaa ggaggccacg aagccgggga
     4561 acaactgggc catcacctct ccgtcgtcga tggtcaccgg gcggtcggcg cccatgccga
     4621 gcacgaggaa cgccatcgcc agcctggggt caagccggac cgcgacgctg ccgccgccgg
     4681 ggacgcggcg ggcgccgcgg acggcaaggc cctcggcgcg ctcctcgcag tcgacgccat
     4741 tggcccgcag cgcgcggctg agggtcagcc ggcgggcgcc gtgcccgaga ccctcgatca
     4801 gggtctcgcc gctggcgaac gcggcggcga cggcgaggat ggcgaaatcc tcgggtgcga
     4861 tgccgagggc ggccgggatc accgtgccgg tcagcgggcc gtggacgatc ctgaggtcga
     4921 cgccggcgcc gcgttcggcg ggatcgaggc ggatgtcgcc gcccagcatc tgcagcgcgt
     4981 cgagcagcgc catgcggtcg tggtcgagcg cgaggccggg gacggtgatc tcggaatcgg
     5041 gggcgatcag ggcggcgacc gccggatagg cggcgagccc gggatcggcc ggcaggctca
     5101 gggcctgggc ccgcagcggc gccatgccct cgacggcgag gcgggtcgcg tcgtcgccgg
     5161 gcgtcgcggc aagcctgccg ccaaagccgg ccagcagcgc ttcggcggcg ctgccggttt
     5221 cgggcgtctg cagcacgctg gtgccggtgg tgaccagcgc ctgcagcagg aacggcaggg
     5281 ccagcgggcc ggcgccgggc ggcagcgcca ggtcgagcgg cagcccgaag cgcggcgcgc
     5341 gggtcacgag gtcggtgccg tggcggccga tgcgactgcc gttgcgctgc aggaaatcga
     5401 ggagcgcgtc ggtcatcggg gccgccatgc agccggtgaa gcgcgtctcg aaatcgtgcg
     5461 cggccagcag ggcgaggacg agcagcccgg cctcgccgag cggcggcagg tcgatgggcg
     5521 cctcgggggc gaggaagccg ccgacgccga tgccctgcac gtggatgcgc tcgccgtggc
     5581 ggtcgagccg cgcccccagc cggggcagca gctccatcac cgccgcggtg ccggggccgg
     5641 catcgagatt gtcgaggacg ctttcgccgc gtgccatcgc cgccagcagc agcgccgccg
     5701 ccgagaccga cggggcggcc ggaacgcgga tcggaccgcg cagccagggc gagcgctcgg
     5761 cggcgagcgg atgggtggaa ctggacgctg ggatcatcgg gcacgcaact tcgtgccgag
     5821 ggctagcatt gccagtggct cgccagcaaa tgcggccggt ttgcggcacc tgccgcgcgc
     5881 cgcgggcgaa gcgcagtttt gcgtttgaca gagcgcggct ttcaccctag agcgcgggcc
     5941 ggctcgacgg cgcggagatg ccctcgcgcc gagggttcgg cgcgaacgca acgggtcccg
     6001 gtggtggtgc cggcccgcag cgtctggtgc gcccggcggc aaaccccggc ggcgggtttt
     6061 gcgctcatcg aggcagagga agcagcattg gccaaagaca tccgcggaac caagcgcgaa
     6121 gaccccgaga ccggcaagaa attctatgac ctgaaccggg acccgatcgt ctcgccctac
     6181 accggcaaat cgtatccgcg ctcgtatttc gagcagaacg cggtgcgcaa ggccggcgcc
     6241 gagcgcgacg aggagccgga cgaggaagag gaggccgagg tgccggaggc ggcgcccgcc
     6301 gccgctgccg aggagcccga agtgatctcg ctcgaggatg ccgacgccga ggaagccggc
     6361 ggcgaggaag agattcccga ggtcgagggc gtcgaggagg ccgaggacat cggcgaagac
     6421 gacgcggacg tgttcctcga agaggacgag gaagaagacg agaacctcga tttcgacacc
     6481 ggcagcgacg agcgctgagg cggcgaaatc gtccttgcgt cacgccggac ggtccaatag
     6541 ataacacgcg cccgacggcc ccggccggcg ggcatcccaa gagaacgggg ccatagctca
     6601 gttgggagag cgcttgaatg gcattcaaga ggtcgacggt tcgatcccgt ttggctccac
     6661 catctctctc cgaacggcgc ccgcgggcgc cgttttcgtt tgcgtttgaa acgcattgac
     6721 cgccatcgcc taacccgcgg ttaagtctct ggtttaagcc ttcctagcgg ttttccgtgg
     6781 agatttggcc caaaccaaaa ggcggggcgg cctcggcgcc gaaacaacat gctgcgacat
     6841 tacgggatgc ttctggcgac catcggtttc gccctcatcg ggggcgcggc gatggccgac
     6901 gactggacgg cggtgcagct gcgcggccag gtgatgcagt tcgtcgacaa gagctggcag
     6961 ccggtgcagc gcggcgacgt ggtggccgac gaaacgatgg tgcgcacgtc caacaatggg
     7021 cacgccgatt tcgtccgcgg cgaggagacg gtctcgctcg accccaacac cgagatcacg
     7081 atccacgaca agccgacggg caacggcaag ccgtacacca cggtctcgca gtatttcggc
     7141 accgtatcgg tcgaggccga ggtgcagcac gtgcagcatt tctcggtgga gacgccgtac
     7201 ctcgcggccg tggtgaaggg gacgaagttc accgtcgttt ccagccatgc cggctcgcgc
     7261 gtcagcgtcg agcgcgggca cgtgcaggtg acggacttcg cccaccacac ggcgacgctg
     7321 atctccgccg ggcaatcggc ctcgatcggg gccagcggtc cgtcgtcggc ggggctcgtg
     7381 gtgtcgggag cgggcgtgct gcccccggtg accggcggcg ccggcacggc ggccgtcggg
     7441 ctgttgcccg gcgtcggctc gacggtgacc tcgacggtcg ggcttgtcgg ctcgacgctg
     7501 gacaccacgg tcggtgcggt cggctcgacg gtcgatacca ctgtcgggtt cgtcggatcg
     7561 acggtgggga gcgtcggctc gacggtcgaa acgaccgtcg gcacggtgac atcgacggtg
     7621 agcgacgtga cgtccaccgt ggatggcgtc gttggcggcg tcgtgggcgg cgtgctcggc
     7681 gggcactcgg acaacggcac cggcaatgac gggcagagcg gcaccgggca gcagcacaat
     7741 aatggcaatg gcggcctcgt cggctcgctg ctccatcact tgctctagac catgttcgtg
     7801 gcgcggctcg cggccggacg aagcagattc tggccggccc tggcgctgtg ggcggcgatc
     7861 ggcgtcgccg cgtgggccgg ctggttcgcg ccgctcgaca acgcgctgcg cgaggcgcgc
     7921 ttccacctga ccacgcgtgg caccagcggc agcgccgtat tcgtcgacat cgacgcgcag
     7981 agccttgcga ccgtgggcgt gtggccgtgg ccgcggcacc tctatgcgca gatgctcgac
     8041 aagctgatgc agctgggtgc ggccgacgtg gtcttcgacg tcgatttcag cgccgcctcg
     8101 agcgagaccg aagatgccgc gttcgagcga tcgctggcgg atgcgggggg ctatgcattc
     8161 ctcgcggcgt tccagcagca gcgcgaagcc ggcgggtcgc agccgttcaa cctgccgctg
     8221 gcgcggtttt tgaagaacgc cgctccagtc gcggtcaatg tcagcctcga cggcggcggc
     8281 gtggttcgcg acacgccgct ggcggtcagc atcggcggcc ggccgatcgc ctcggcggcg
     8341 gcgacgctgg cgcaggtgaa gggcgccccg ggacagagcg tcggcatcga tttttcgatc
     8401 gatcccggca gcatcgtccg ggtctcggcg gccgacctgc tcgccggcaa ggtcgatccg
     8461 gcgctgctcg ccaacaggca ggtggtgatc ggcgcctcgg cggtcgagct cagggatttc
     8521 ttcgtggtgc cgcgctacgg catcgtgccg ggggcggtgc tgcagattct cgcggcggaa
     8581 acgctgaagc agggtcgcgg gctggtgtcg ctcggaccgt ggccggcgct gatggcgctg
     8641 ctgctgattg ccggtgccgg gctggcaggc cggcgccgcg tgccggtggc ggtcaccatc
     8701 ggcgccgcca cggcgcttgc cgttgcgatc gagatcgcgg catcgctgct gcaggtcgaa
     8761 tgggcgctgc tgctcgacag cgccgccatc gatgccggcc tcggcgtgct ggcgctgcag
     8821 gcgctggtgg gcgaactgaa gcggcgcggc gagctgaagc gggtggccga ggagcggctc
     8881 cgctatctgg ccgagcacga tccgctgacc ggggcgctgt cgcgcacgag cgtcgtcgaa
     8941 tacatcgccg ccgagctcgc ggccaggcac gagctggcgg tggtggcgat cgacctccgg
     9001 cgcttccgcg ccatcaacga taccctgggc catagccgcg gcgacgagct gctgaagcag
     9061 gtggtgcagc ggctgagcac gatgggcccc gacgtggtgg cgcggctcgg cgccgacagc
     9121 ttcgtggtgg tggcgccggc gacgaccccg gaccggctgc tcggctattg cgaggcgatc
     9181 accgagtggc tggcgttccc ctacgagctc gatgccgacc accaggcgac gatcgccgcc
     9241 tcggccggcg cgacgctgtc ggtggtttcg ggccacgatc ccgagatgct gctgagccac
     9301 gccgacatgg cgctgtcggc cgccaagcag cgcaccggcc acggcgcagc gctgttcgcc
     9361 acggagatgg cgggccggct gaaggccagc cgggcgctgg acgcagcgct gcggcaggcg
     9421 gtggtcaagc aggagttcac cctgctctac cagccgcagg ccgacctcgg cagcggccgg
     9481 atcgtcggcg cggaagcgct ggcgcgctgg acgcatccga cgctgggcac gatcccgccc
     9541 gtcaccttca tcgccgcagc cgaggagacc gggctcatcg tcgatatcgg ccgctgggtg
     9601 ctggagaccg cctgccgcga ggccgccggc tggcccgacg aggtgcgcat cgcggtcaac
     9661 gtgtcgccgg tgcagttcga gctgtcggac gttgccgccg acgttgccgc ggcgctcgag
     9721 cactccgggc tggcgcccga gcggctcgac atcgagatca ccgagggggt gttcgtgcgc
     9781 aacgccgtga cggtgacgca caagctcgac gccgtgcggg cgctgggggt cggcatcgca
     9841 ctcgacgatt tcggcaccgg ctattcgtcg ctgggctatc tggggcaatt gccgatcgac
     9901 aagctgaaga tcgaccagag cttcgtgcgg cggctgccgg gcgatgcgga ggcggtggcg
     9961 atcatcaagg cggtgatggc gctcagcacg gcgctgggca aatccgtggt ggccgaaggc
    10021 atcgagacga tggagcaggc cgccatcctg cgcggtttcg gctgctcggt gatgcagggc
    10081 taccagttcg gccggccgat gccggcgacc gccatccggg cccgcttcga cacgcggctg
    10141 ctggccttcg gccgggccgg ctgagcccgt caggccggct ggaccggcgt tccatcgctg
    10201 gccggctgga gcaggccata ggagcgcgcc agctgcgcta cgatcccggc catgcaggcc
    10261 cggagcgagg ccggtgccag cacttcgacc tcggcgccgg cgcgcgtcat ctcgcggctg
    10321 gcccatttct cctcttcgat gggcacgtcg agctcggtcc agccgtcggc accgaagacc
    10381 ggctgctgcg cctcgatctc gtcccggcag cgctggctga tgtccttgag gcgcgcgacg
    10441 ccgatgcggc tggcccggac gcgcgcgacc ccgacataga tttcgcgctc gaacgaggcg
    10501 gtggccgtct gccagtgccg cggcaggtcg aaatcggcgg gccgctcgaa aggctcgtcg
    10561 agcagggtca gcgcctggat ctgggtcagc cggtaggtgc ggaagccggc ctcgcgctgg
    10621 ccgacgaggt accagacgcc gcccttcagc acgaggccga gcggctcgac gacgcgctcg
    10681 ctgacctgcg tccagctgtc gtagcggatc agcacccggc gcgccgtcca caccgcctcg
    10741 gccaccagct tgaggaactc cgggcgcggg ccggtgtgga accagccgcg cggatcgagg
    10801 tggaagcgcg aggacatgcg cgtcgcctcc gactgccagt cggccggcag cgccgccagc
    10861 agctt
//
LOCUS       DATAZA010000028         3074 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1626509, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000028 DATAZA010000000
VERSION     DATAZA010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3074
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1626509"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..835
                     /gene="lptD"
                     /locus_tag="VHZ56_00680"
     CDS             <1..835
                     /gene="lptD"
                     /locus_tag="VHZ56_00680"
                     /inference="COORDINATES: protein motif:HMM:NF016348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0010033 - response to organic substance
                     [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HEX4296514.1"
                     /translation="LPSAPPATFLLSATPIAAMDVRWPLMAVNGSDTHLLEPIAQLVY
                     RGSSTSDVGITDDDSQGFVFDDSNLFSYDRFSGIDRQETGLRANLGAHYLGNFGNGSW
                     LDLVAGESFQLAGANAFDALDPTLTGTDSGLDSTASYLVAGARAGFTNGITVGTKVQV
                     DPSAPRVTRAGLGVTWSPGNRFSVGATYVYVAADPTLGLPSPQHEIAGSVSLPVDDYW
                     TVNGGLTYNIAATNWIKANAALTYDDGYFSAGVFGDFAPTDYTVGIHLKLKGPDGSLA
                     F"
     gene            900..1802
                     /locus_tag="VHZ56_00685"
     CDS             900..1802
                     /locus_tag="VHZ56_00685"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HEX4296515.1"
                     /translation="MKMLRVLGALALAFGLAMAVSPTLAATVKVTVNGEPITDVQIAA
                     RFALLHLEHRDGPGPKAAVDELVNEQLEQQEAKRLGFTISDSDVDDAFLQLARQLKVS
                     ASNLTKIMTDSGVSPDTLRDRLRATLAWSKVTGTVISSKVQISEADIDAAAKAKLTQA
                     NSYDYILKDVFFLLPGGKGDPSKRTAEANQYRKNFTGCADAVQLSLSYTDVAVRDIGR
                     RHATQFPDAIADELAQLNVGGITKPRVVDGGVDMLAVCTKEVSTDTTFIANQLRQTEG
                     NGALKTEADKYLADLKAKAQIVYS"
     gene            1802..2806
                     /gene="pdxA"
                     /locus_tag="VHZ56_00690"
     CDS             1802..2806
                     /gene="pdxA"
                     /locus_tag="VHZ56_00690"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018697879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0042823 - pyridoxal phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEX4296516.1"
                     /translation="MAAPAPIAISMGEPAGIGPDLILGLYGEREAHQLPPFVVVGNMG
                     FLAARARRLGLSLNFVQTTAAEAPGQFATALPVIHIDGLVPDKPGETSPLSGKVVIEC
                     IARAVSETLAGRCRAVVTAPIHKAALYTAGFKYPGHTEYLAALCANGKGTPLPVMLMV
                     HEALRVAPLTIHVPLREVPGLITARLIRESAQIVEHDLRTRFGIEAPRLAVTGLNPHA
                     GEGGSIGTEDLDVIAPAVLDLQHNGMLIEGPFSADTVFYPPNWRKYDAVLAMYHDQAL
                     IPIKTVAFDEGVNVTLGLPLVRTSPDHGTAFALAGSGKGSVNSMLAAIRMADRMTDRA
                     "
     gene            2803..>3074
                     /locus_tag="VHZ56_00695"
     CDS             2803..>3074
                     /locus_tag="VHZ56_00695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA adenine N-6-methyltransferase family
                     protein"
                     /protein_id="HEX4296517.1"
                     /translation="MSQIDDLPPLREVIARHGLSAKRQLGQNFLLDLNLTARIARVAA
                     PLAGHTVIEVGPGPGGLTRALLSEGAGRVIAIERDERALPALAEIAA"
BASE COUNT          522 a         1062 c         1026 g          464 t
ORIGIN      
        1 cctgccctcg gcgcccccgg cgacgttcct gctgagcgcg acgccgatcg cggcgatgga
       61 tgtgcgctgg ccgctgatgg cggtcaacgg ctcggacacg cacctgctcg agccgatcgc
      121 gcagctggtc tatcgcggct cctcgaccag cgacgtcggc atcaccgacg acgattcgca
      181 gggttttgtg ttcgacgaca gcaatctgtt ctcctacgac cggttctccg gcatcgaccg
      241 ccaggaaacc gggctgcgcg ccaacctcgg cgcccactac ctgggcaatt tcggcaatgg
      301 cagctggctc gatctcgtcg ccggcgaatc cttccagctg gcgggcgcca atgcgttcga
      361 tgcgctcgat ccaaccctga ccggtaccga cagcgggctc gacagcaccg cgtcctacct
      421 cgtggcaggg gcgcgggccg gcttcaccaa cggcatcacg gtgggcacca aggtgcaggt
      481 cgatccatcg gcaccgcggg tgacgcgggc cgggctgggc gtcacctggt cgccgggcaa
      541 ccggttctcg gtcggcgcca cctacgtgta cgtggcggcg gacccgacgc tcggcctgcc
      601 ctcgccgcag catgagatcg ccgggtcggt atcgctgccc gtcgacgact actggacggt
      661 caatggcggg ctcacctaca acatcgccgc aacgaactgg atcaaggcca atgccgcgct
      721 cacctatgac gacggctact tctcggccgg cgtgttcggc gatttcgcgc caacggatta
      781 taccgtcggc atccacctca agctgaaggg gcccgacggc tcgctggcat tctgacgcac
      841 cgatttcagc cgcaattttc gaccacagaa agccgagggc tttccaacac aggcagacga
      901 tgaagatgct tcgcgtactg ggcgcactgg cgctggcttt cggtctggcg atggcggtgt
      961 cacccaccct tgcggcgacc gtcaaggtca cggtcaatgg cgagccgatc accgacgtgc
     1021 agatcgcggc gcgctttgcg ctgctgcatc tcgagcatcg cgacggaccc ggcccgaagg
     1081 cggccgtcga tgagctggtc aacgagcagc tcgagcagca ggaggcgaag cggctcggct
     1141 tcacgatcag cgacagcgac gtcgacgacg ccttcctgca gctggcgcgg cagctcaagg
     1201 tcagcgccag caacctcacc aagatcatga ccgacagcgg cgtcagcccc gacacgctgc
     1261 gcgaccggct gcgcgccacg ctggcgtgga gcaaggtcac cgggacggtg atcagctcca
     1321 aggtgcagat ttcggaggcc gacatcgatg cggcagcgaa ggccaagctg acgcaggcca
     1381 acagctacga ctacatcctc aaggacgtct tcttcctgct gcccggcggc aagggcgacc
     1441 cgtccaagcg caccgccgag gccaaccagt accgcaagaa cttcaccggc tgcgccgatg
     1501 ccgtgcagct ctcgctgtcc tataccgacg tggcggttcg cgacatcggc cgccggcacg
     1561 cgacgcagtt ccccgacgcc atcgcggatg aactggcgca gctcaatgtc ggcggcatca
     1621 ccaagccgcg cgtggtggat ggtggcgtcg acatgctggc ggtgtgcacc aaggaagtgt
     1681 cgaccgacac caccttcatc gccaaccagc tgcggcagac cgagggcaat ggcgcgctga
     1741 agaccgaggc cgacaaatat ctcgccgatc tcaaggcgaa ggcgcagatc gtctacagct
     1801 gatggccgcg cccgcgccca tcgccatcag catgggggag ccggccggca tcggccccga
     1861 cctgatcctc gggctctatg gcgaacggga ggcgcaccag ctgccgccgt tcgtggtggt
     1921 ggggaacatg gggttcctcg ctgcgcgggc gcgccggctg gggctcagcc tcaatttcgt
     1981 ccagaccact gccgcagaag caccgggcca gttcgccacc gcattgccgg tgatccacat
     2041 cgacgggctg gtgcccgaca agccgggcga gaccagcccg ctgtcgggca aggtggtgat
     2101 cgaatgcatc gcgcgggcgg tcagcgagac gctggcgggg cgctgccgcg cggtggtcac
     2161 ggcgccgatc cataaggcgg cgctctacac cgccgggttc aaatatcccg gccacaccga
     2221 atacctggcg gcgctgtgcg ccaacggcaa gggcacgccg ctgccggtga tgctgatggt
     2281 gcacgaggcc ctgcgcgtcg cgccgctcac catccacgtg ccgttgcgcg aggtgcccgg
     2341 gctgatcacg gcccggctga tccgggagtc ggcgcagatc gtcgagcacg atctgcgcac
     2401 ccgtttcggc atcgaggcac cccggctggc cgtcaccggg ctcaacccgc atgcgggtga
     2461 aggcggcagc atcggcaccg aggacctcga cgtcatcgcc ccggcggtgc tcgacctgca
     2521 gcacaatggc atgctgatcg agggaccatt ctcggccgat acggtgttct atccgccgaa
     2581 ctggcgcaaa tacgacgccg tgctggcgat gtaccacgac caggcgctga tcccgatcaa
     2641 gacggtggcg ttcgacgagg gcgtcaatgt cacgctgggg ttgccgctgg tacgcacctc
     2701 gcccgatcat ggaacggcgt tcgccctggc cggcagcggc aaggggtcgg tcaattcgat
     2761 gctggcggcg atccgcatgg ccgaccggat gacggaccgg gcttgagcca gatcgacgat
     2821 ctcccgccgc tgcgcgaggt gatcgcccgg catggcctca gcgcgaagcg gcagctgggg
     2881 cagaacttcc tgctcgacct caacctgacg gcgcgcatcg cccgcgtcgc cgcccccctc
     2941 gccggccaca ccgtgatcga agtcggcccc gggccgggcg ggctgacgcg ggcgctactg
     3001 agcgagggcg ccgggcgggt gatcgcgatc gagcgcgacg agcgggcgct gccggcgctg
     3061 gccgagatcg ccgc
//
LOCUS       DATAZA010000029         2576 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_117946, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000029 DATAZA010000000
VERSION     DATAZA010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2576
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117946"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="VHZ56_00700"
     CDS             <1..235
                     /locus_tag="VHZ56_00700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004122358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0016653 - oxidoreductase activity, acting
                     on NAD(P)H, heme protein as acceptor [Evidence IEA];
                     GO_process: GO:0006784 - heme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HEX4296518.1"
                     /translation="YAGALFFWKRGAGGFAGANGWLPRIALLILLQACLGITTLLLDV
                     PLPFALGHQALAFMLAGATIAWLADITPRKALG"
     gene            complement(236..1069)
                     /locus_tag="VHZ56_00705"
     CDS             complement(236..1069)
                     /locus_tag="VHZ56_00705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004116204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEX4296519.1"
                     /translation="MPTPAADRIAVSTWSLHRLMGTTYPHDLSTDAVGAAAETYGPVT
                     EPLLDIPAALHNHGFHRMELVSFHLPSRDPVYLGELRAELDEAGVLLQTLLIDAGDIT
                     DPVNGARDEAWIARWIETANELGAAHARIIAGKQPPTREAIDRSVTALRRLADGNAGS
                     AVRLATENWFELLGNAAMVNEVLDRLEGKVGLLADFGNWRGAGKYGELAKIFGRAELC
                     HAKASFPDGMLDTDDYGRCVDLAEAAGYAGPYTLIFDADTPEEWRGLEIERDFIVSRI
                     D"
     gene            1185..2147
                     /locus_tag="VHZ56_00710"
     CDS             1185..2147
                     /locus_tag="VHZ56_00710"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: protein motif:HMM:NF015047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEX4296520.1"
                     /translation="MIHTSACRILGIVHPVVQAGMGGGANPALVAAVSEAGGLGILPC
                     SWSEPDEIRAAIADIRSRTSKPFGVNFVIGQVPPERIEIAIAERVPVISLFRGTDPSD
                     IVARAHAAGLVATHQVTTVDEARASLAAGVDVLIAQGREAGGHMGPHPLWTLLPQVLD
                     IAGDVPVLASGGLVDGRDLAAALAMGAAGVHMGTRFLASVEAPVAEQHKAMVLAARDG
                     ATVASKMWDILFNTQWPGVAVRALQNDFTLRWAGREGELVRSLPSVRAEFDVALAQAD
                     HTRIAVMAGEGSARIQSVLPAAEIVRTIVADTETALRRAVSALA"
     gene            2323..>2576
                     /gene="rplM"
                     /locus_tag="VHZ56_00715"
     CDS             2323..>2576
                     /gene="rplM"
                     /locus_tag="VHZ56_00715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEX4296521.1"
                     /translation="MSTYTAKPSDITKKWVLIDASNLVVGRLASIVALRLRGKHLPTF
                     TPTIDMGDNVIVINAAKVKLTGNKLDQRKFYWHTGFPGGI"
BASE COUNT          405 a          910 c          835 g          426 t
ORIGIN      
        1 ctacgccggc gcgctgttct tctggaagcg cggggcaggg ggctttgccg gcgccaatgg
       61 ctggctgccg cgcatcgcgc tgctgatcct gctgcaggcc tgcctcggca tcaccacgct
      121 attgctcgac gtgccgctgc ccttcgcgct cggccatcag gccctggcct tcatgctcgc
      181 cggtgccacc atcgcctggc tcgccgacat cacgccgcgc aaggccctcg gctgatcagt
      241 cgatccgcga gacgatgaag tcgcgctcga tctcgaggcc ccgccactcc tccggcgtgt
      301 cggcgtcgaa gatcagcgta tagggcccgg catagcccgc ggcctcggcg agatcgacgc
      361 agcgtccgta gtcgtcggtg tcgagcatgc cgtccggaaa gctcgccttg gcgtggcaga
      421 gttcggcgcg gccgaaaatc ttcgccagct cgccgtattt gccggcgcca cgccagttgc
      481 cgaaatcggc gagcagcccg accttgccct cgagccggtc cagcacctcg ttgaccatcg
      541 ccgcgttgcc gagcagctcg aaccagttct cggtcgcaag ccgtaccgcc gatccggcgt
      601 ttccgtccgc cagccgcctg agcgccgtga ccgagcggtc gatcgcctcg cgcgtcggcg
      661 gctgcttgcc tgcgatgatc cgggcgtgcg ccgcgcccag ttcgttggcc gtctcgatcc
      721 accgcgcgat ccacgcctcg tcgcgggcgc cattgaccgg gtcggtgatg tcgccggcat
      781 cgatcagcag cgtctgcagc aacacccccg cctcgtcgag ttcggcccgc aactcgccca
      841 ggtacaccgg gtcgcggctc ggcaggtgga acgacaccag ctccatccga tggaagccgt
      901 ggttgtgaag cgcggcggga atgtcgagca gcggctccgt caccggccca taggtctcgg
      961 cggccgcgcc gacggcgtcg gtcgacaggt cgtgcggata ggtcgtcccc atcagccggt
     1021 gcagcgacca ggttgagacg gcaattcgat cggcggcggg cgtcggcatg aaattctccg
     1081 gtttggcagc cgaccttgcc cgccgtggtc gctcgcggca aggcggtcct gcatccattg
     1141 accgtctccg ggtcgaatgg gagactgcga ggggggacca aagaatgatc cacaccagcg
     1201 cctgccgcat tctcggcatt gtccatcctg tcgtccaggc cggcatggga ggcggcgcga
     1261 accccgccct cgtggccgcg gtcagtgaag cgggcgggct gggcatcctg ccgtgctcat
     1321 ggagcgagcc ggacgagatc cgggcggcga tcgccgatat ccgcagccgc accagcaagc
     1381 cgttcggggt caatttcgtc atcggccagg tgccgccgga gcggatcgag atcgccatcg
     1441 ccgaacgggt gccggtcatc tcgctgttcc gcggcaccga tccgtccgac atcgtcgcgc
     1501 gggcccatgc ggccgggctt gtggccaccc atcaggtcac caccgtggac gaagcccgcg
     1561 catcgctggc ggcgggtgtc gacgtgctca tcgcccaggg tcgtgaagcg ggcggccaca
     1621 tggggccgca tccgctatgg acactgctgc cgcaggtcct cgacatcgcc ggcgacgtgc
     1681 cggtgctcgc cagcggcggc cttgtcgatg gtcgcgacct ggcggcggct ctcgccatgg
     1741 gcgcggccgg cgtccacatg ggcactcgct tcctggcatc ggtggaggcc ccggtggccg
     1801 aacagcacaa ggcgatggtc ctcgccgccc gggacggcgc aacggtcgcc tcgaaaatgt
     1861 gggacatcct cttcaacacg cagtggccgg gcgtcgccgt gcgagccctg caaaatgact
     1921 tcaccctgcg ctgggccggc cgagagggag aactcgtccg ctcgctgccg tcggtacgcg
     1981 ccgagttcga cgtggctctg gcccaggcgg accatacccg gatcgcggta atggccggcg
     2041 aaggatcggc acgcatccag tccgtcctgc cggccgcgga gatcgtccgg accatcgtcg
     2101 cggacaccga gaccgccctc cgccgcgcgg ttagcgcgct cgcctagcca aacgccagca
     2161 gtcgcaggcc gtccgtagcc ggtattatga taccgaaaat gcaagctact gttttcgttg
     2221 cgataattgc catcacttga cgcggcgcga atccctgcta cacaccgcgc actgaaaccg
     2281 gcggaaacag cctccgccca ctgcatttcc aaggatttcc cgatgtcgac ctacacggcc
     2341 aagccgagtg acatcacgaa gaaatgggtg ctgatcgacg ccagcaatct ggtcgtcggc
     2401 cgcctcgctt cgatcgtggc actccgcctt cgcggcaagc acctgccgac cttcacgccc
     2461 accatcgata tgggcgacaa cgtcatcgtc atcaacgcgg ccaaggtcaa gctgacgggc
     2521 aacaagctcg atcagcgcaa gttctactgg cacaccggct ttccgggcgg catcaa
//
LOCUS       DATAZA010000030        10399 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4063766, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000030 DATAZA010000000
VERSION     DATAZA010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 10399)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10399)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10399
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4063766"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1043)
                     /locus_tag="VHZ56_00720"
     CDS             complement(<1..1043)
                     /locus_tag="VHZ56_00720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008533377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000976 - transcription cis-regulatory
                     region binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX4296522.1"
                     /translation="MQLQRLATIEDVAGIAGVSIATVSRAINEPAKVADATRRRVNEA
                     IAVTGYTTNAMARSLRIRRSNTILILAPDVGDPNFSNILVGLETEASKRGYGVLIGNT
                     QNDPTRETDYLRFISSNQATGLILLTGHLPFGLGHNGPSRMPPMVAVNEPVPGDRVPF
                     VGVDNFEGARIAAEHLISQGHRRIAFIGHSTSRVVNELRERGYRAALSQAGIAPEPGL
                     VLDGDGTTESGRQAAEQMFVRDVLPTAFLCVNDATALGVIIALNARGYDLPRQFSVMG
                     FDDISFASFVTPSLTTMKQPRSKIGEVAMNLLLAAVEDRPPEQLEVLLRSELVLRNSV
                     ARLEPGERDLRVLR"
     gene            1235..2758
                     /locus_tag="VHZ56_00725"
     CDS             1235..2758
                     /locus_tag="VHZ56_00725"
                     /EC_number="7.5.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004117720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HEX4296523.1"
                     /translation="MSSNDGAAVPPILSANRISKSFGEIPVLFSVDFDVRPGEVHAII
                     GENGAGKSTLMKILSGFEQPTSGTISYDGKVVTLPPNGQAEALGIVLIHQELNLAEHL
                     RVVDSIFLGREISHGGLLDVRQMHDRAKTLLETLHVRIDPNARIDSLTVADKQMVEIA
                     KAISRDARVLIMDEPTAVLSLAETTTLFEQIKRLTGRGVAIIFISHKLDEVMRLSDRV
                     TVLRDGQLIATVDASALTPDSAAQMMVGRELHNLYPPKHEPDVDAPRVLTVSHLSAPG
                     IIDISFELRKGEILGFAGLVGSGRTAMAEAVVGLTARTAGEVTVGGHAVHFGNVAQSL
                     ATGLAYMTKDRKGKGLLTNMGLTPNLTLLTLKRHLRGVFLDTASETRALERATRRFDI
                     RARDASVRAGQLSGGNQQKLMLGKTMESEPEIIIMDEPTRGIDVGTKQQIYHIVAALA
                     AEGKSIILISSELQEVIGLSHRVMVMRFGRIVGELEGEQITEEQIVRHQMGIEGKAA"
     gene            2755..3759
                     /locus_tag="VHZ56_00730"
     CDS             2755..3759
                     /locus_tag="VHZ56_00730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007067582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4296524.1"
                     /translation="MSTAVSEQPPRAARPKFRLSALGPVLALLLLLILGASLNSNFLS
                     VANMANIVARASFIGIIAIGATFVITSGGIDLSVGSMSAFISGMMIIIINSLVGPLGT
                     GWGSVGIGIVAGLAIGALGGAANGALVTVGRIEPFIVTLGSLGIFRALITFLANGGTL
                     NLNDAANDTYSPLYSGSVLWVPMPIVIFAVVAIIAEIAMRRTTFGRHIAAIGSNEQVA
                     RYSAIKVDRVRFMTYALQGMLVGLASVLYVPKFGSANSSTAVLWELQAIAAVIIGGTT
                     LRGGFGRIWGTVVGVIILELIGNILNLQSFISPYLNQAFQGAIIIVAVLLQRTRRTTS
                     "
     gene            3813..4769
                     /locus_tag="VHZ56_00735"
     CDS             3813..4769
                     /locus_tag="VHZ56_00735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018446023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX4296525.1"
                     /translation="MHLLKTTAVVALVAAGLGFGSVAFGQDKTYTIGVSVPTADHGWT
                     GGVDFFAQQAIDRLSKAYPNVKFVLATAPDSTKQAADLEDMVTTRNIDGLVILPGDPD
                     AMTASIKKVKDAGKWVTIVDRALSQPGIPDLYVAGDNPGLGATTAAYFKQAMPNGGNI
                     VVLRGAPIPIDKQRVDAFMAGIAGTNIKVLDSQFANWNRDDGYKIMQDMLTKYNNIDA
                     VWCQDDDTLVGVLKALKEANNTKIWAVGGAGMNQIIKMVEAGSTQVPVDVSYNPNMVA
                     TAIDLTTLHFAAGAQVDGNFIINSSLITKDNAKDFDYANTPF"
     gene            complement(4834..5187)
                     /locus_tag="VHZ56_00740"
     CDS             complement(4834..5187)
                     /locus_tag="VHZ56_00740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296526.1"
                     /translation="MTTRILMIATLLTVSAALAVATPALAADSTPGYQPPANEAASRA
                     GPLVLPGTATPMPTPLVDGSAVSRDIFGGDPADALDDLGTVTLSNDGTIEELPASDAL
                     RAIFAAAVKGYKPGT"
     gene            complement(5298..5837)
                     /gene="hpt"
                     /locus_tag="VHZ56_00745"
     CDS             complement(5298..5837)
                     /gene="hpt"
                     /locus_tag="VHZ56_00745"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004986218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006166 - purine ribonucleoside salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HEX4296527.1"
                     /translation="MTARPYAVDQMISAKAIAARVEALAREISDYFHGTDKLVVVGLL
                     RGSFIFIADLVRELDLPVEVDFLEVSSYGNATESSREVRILKDLRGEIEGRDILVVED
                     IVDTGRTLRHVLDILKTRHPRRVEVCALLDKPSRREVDVKARWIGFEIPDKFVVGYGI
                     DYAQRNRNLPHIGAVRFDD"
     gene            complement(5860..6255)
                     /locus_tag="VHZ56_00750"
     CDS             complement(5860..6255)
                     /locus_tag="VHZ56_00750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006201871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296528.1"
                     /translation="MVRLLAVLALLLLAVAPAMARTIDVYDDHGGSVAQYDARWAGLA
                     AEGVSVRIVGPCQSACTVLLGHIPRSRICVTPQARFGFHLAGLDSATATLWAAYQGDI
                     RAWIKAHGGLTHDFIWMAAPDIYRYFAKC"
     gene            6466..6786
                     /locus_tag="VHZ56_00755"
     CDS             6466..6786
                     /locus_tag="VHZ56_00755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296529.1"
                     /translation="MRKFVLPIALIASLAVSSVAMAATAPAAAPAPKSTTTIGKVLAV
                     STKFCTVTVANKGVFIFGAKCNLAKIKVGDKVEITWWLKGALREATKITDDGAAKMMP
                     MMTK"
     gene            7040..9949
                     /locus_tag="VHZ56_00760"
     CDS             7040..9949
                     /locus_tag="VHZ56_00760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4296530.1"
                     /translation="MPASQPILEFGQMGYVIKAHDWSASGLGPPELWPAALRLAVGMC
                     LRSELLTTVYWGRDFRLFYNDPTIRLLGDKHPQALGRPAREVWADTWPELGPLYERVM
                     SEGREVGGTNRRFSLDSNGQRTESYFSYSFAPIVEEDGNVGGIFAQARETTPVVLRER
                     SLSADRQRLREMFEQAPGLFALLRGPEHAIEFLNPAAAALIGQRDTIGKPVREALPEI
                     EAQGFVQLLDQAFSTGQAVSGTSMPASIDRAGDQPNDLRYLDLVFQPLTTADGTVDGI
                     LVQGMDVTERFTAAAALGESEERFRLIAEKAPVMLWMSDPNGKCLYLNTALRDFWSVR
                     PEDVLSFDWNPTIHPDDVAPLAIPWMEGMQNRTGFTVEARYRRADGKYRVLHTTAQPR
                     FGPGRSFLGMIGVNVDVTETRRIETALRDLNETLEARVTEEIAVRRQAEAALQQAQKM
                     EAIGQLTGGVAHDFNNLLQVIGGNLQLLAKDVAGTERAEKRVSNALEGVRRGAKLASQ
                     LLAFGRRQALEPRAVNVGRLVVGLDEMLRRTLGESIEVETVIAGGLWNCLVDPSQIEN
                     AVLNLALNGRDAMPGGGRLTIEAGNASIDESYARTIPDATPGQFVLLAVTDTGTGIPP
                     ETLEHVFEPFFTTKAEGRGTGLGLSMVYGLVKQSGGHVRIYSEVGHGTTVKLYLPRVM
                     AEEDPQRLPETGAVEGGQETILVAEDDEGVRETVVEILTELGYRVLKAKDAASALTVI
                     ESGAPVDLLFTDVVMPGPLKSPDLARRLRDSHPQIGVLFTSGYTQNAIVHDGKLDAGI
                     ELLPKPYTREDLARRIRRILGSRPLPPAAQPATAPSQAPARSALTILFVEDEAIIRLS
                     TGELLRDMGHVVIEAGDGAEAARILETTAVDLLITDLALPGLPGSDVARRARELYPNV
                     GLVIASGRVERTQTADLPGVVLLAKPYDDKALARAVAQATSRNSGNTDAETLQDM"
     gene            complement(9998..10073)
                     /locus_tag="VHZ56_00765"
     tRNA            complement(9998..10073)
                     /locus_tag="VHZ56_00765"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10038..10040),aa:Ile,seq:cat)
     gene            complement(10115..>10399)
                     /locus_tag="VHZ56_00770"
     CDS             complement(10115..>10399)
                     /locus_tag="VHZ56_00770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296531.1"
                     /translation="LVAELLARGDINDETTLELNRILADWRADRLDPEDAAYVEALHS
                     KLMNVTFEPNEAPPAMPLARLEGLAIEEWRDRALRAESELAQLQEAARDG"
BASE COUNT         1827 a         3328 c         3540 g         1704 t
ORIGIN      
        1 cgcaggacgc gcaaatcccg ctcgcccggt tccagccggg cgacggagtt gcgcaacacc
       61 agttcgctgc gcagcagcac ttcgagctgt tcgggcggtc gatcctcgac cgccgcgagc
      121 aggaggttca tcgccacttc gccgattttc gagcggggct gcttcatggt ggtgagcgag
      181 ggcgtcacga agctcgcaaa cgagatgtca tcgaatccca tcaccgagaa ctgccgtggc
      241 aggtcgtagc cgcgggcgtt gagggcgatg atgacgccaa gcgcggtagc gtcgttgacg
      301 cacaggaacg ccgtcggcag cacgtcgcgc acgaacatct gctcggcagc ctggcggccg
      361 ctttcggtgg tgccgtcgcc gtcgaggacg agacccggct cgggggcgat cccggcctgg
      421 ctcaacgcgg cccggtagcc gcgctcgcgc agttcgttga cgacgcggct ggtcgaatgg
      481 ccgatgaagg cgatgcggcg gtggccctgc gagatcaggt gctcggcggc gatccgggcg
      541 ccctcgaaat tgtcgacgcc gacgaagggc acgcggtcgc cgggcaccgg ctcgttgacg
      601 gccaccatcg gcggcatgcg gctcgggccg ttgtggccga ggccgaaggg caggtggccg
      661 gtcagcagga tcaggccggt ggcctggttg gagctgatga accgcaaata gtcggtttcg
      721 cgggtcgggt cgttctgggt gttgccgatg agcacgccgt agccgcgctt gctcgcctcg
      781 gtttcgagac cgacgaggat gttggagaaa ttcgggtcgc cgacgtcggg cgcgaggatg
      841 aggatggtgt tgctgcgccg gatgcgcagc gagcgggcca tggcgttggt ggtgtagccg
      901 gtgacggcga tcgcctcgtt gacgcggcgg cgggtggcgt cggccacctt ggcgggctcg
      961 ttgatggcgc ggctgacggt ggcaatggaa acgccggcga tccccgcgac gtcctcgatt
     1021 gtggccagtc tctgtagctg cacgtggcgc tccgccagtg gcatcccggc tcagcgtcac
     1081 gacgccgcca acggtcggcc ggcacgggac gctggcggca aactatacgt tttccggcgg
     1141 ctgtaaacct ttacataggg tgtgaaaacc tttacatcgg ttaacgacga agaacgcgga
     1201 tcacgcgtcg cgtcccttgg ggagacgaga ctgcatgtcg agcaacgatg gcgcagctgt
     1261 gccgccgatc ctgtccgcga acaggatctc caagtcgttc ggcgagattc ccgtgctgtt
     1321 cagcgtcgat ttcgacgtcc ggccgggcga ggtccacgcg atcatcggtg aaaacggcgc
     1381 cggcaaatcg acgctgatga agattctgtc gggcttcgag cagccgacct cgggcaccat
     1441 ctcctacgac ggcaaggtgg tgacgctgcc gccgaacggg caggccgagg cgctggggat
     1501 cgtgctgatc caccaggagc tcaacctcgc cgagcacctg cgggttgtcg actcgatctt
     1561 tctcgggcgc gagatcagcc atggcgggct gctcgacgtg cggcagatgc acgaccgggc
     1621 gaaaacgctg ctcgagacgc tgcatgtccg catcgacccc aatgcccgca tcgacagcct
     1681 caccgtcgcc gacaaacaga tggtggaaat cgccaaggcg atcagccgcg atgcgcgcgt
     1741 gctgatcatg gacgagccca ccgcagtgtt gtcgctggcc gagacgacca cgctgttcga
     1801 gcagatcaag cggctcaccg ggcgcggcgt ggcgatcatc ttcatctcgc acaagctcga
     1861 cgaggtcatg cgtctctccg accgggtaac ggtgctccgc gacgggcagc tgatcgcgac
     1921 agtcgacgct tcggcgctga cccccgattc cgccgcgcag atgatggtcg ggcgcgagct
     1981 ccacaatctc tatccgccga agcacgagcc ggacgtcgac gcaccccggg tgctgacggt
     2041 gagccatctc agcgcgcccg gcatcatcga tatttccttc gagctccgga agggcgagat
     2101 cctcggtttc gccggcctcg tcggctccgg ccgtaccgcc atggctgagg ccgtggtcgg
     2161 gctgacggca cggaccgcgg gcgaggtgac ggtcggcggc catgccgtgc atttcggcaa
     2221 tgtcgcgcag tcgctggcga cgggcctcgc ctacatgacc aaggaccgga agggcaaagg
     2281 gctgctgacc aacatgggcc tgacgcccaa cctgacgctg ctgaccctga agcggcatct
     2341 gcggggcgtc ttcctcgaca cggccagcga gacccgggcg ctggagcggg cgacgcgccg
     2401 cttcgacatc cgggcgcgtg acgcatcggt gcgcgccggc cagctgtccg gcggcaacca
     2461 gcagaagctg atgctcggca agacgatgga gagcgagccc gagatcatca tcatggacga
     2521 gccgacgcgc ggcatcgacg tcggcaccaa gcagcagatc taccacatcg tcgcggcgct
     2581 ggccgccgag ggcaaatcga tcatcctgat ctcgtcggag ctgcaggagg tgatcgggct
     2641 cagccaccgg gtgatggtga tgcggttcgg gcgcatcgtc ggcgagctcg agggcgagca
     2701 gatcaccgaa gaacagatcg tccggcacca gatgggaatc gaggggaagg cggcatgagc
     2761 acggcggtgt ccgagcaacc tccgcgcgcg gcgcgaccga aattccggct gagcgcgctc
     2821 gggccggtgc tggcgctgct gctgctgctg atcctggggg cgtcgctcaa cagcaatttc
     2881 ctcagtgtcg cgaacatggc caacatcgtg gcccgcgcct cgttcatcgg catcatcgcg
     2941 atcggcgcga ccttcgtgat cacctcgggc ggcatcgacc tgtcggtcgg ctcgatgtcg
     3001 gccttcatct cggggatgat gatcatcatc atcaacagcc tcgtcggccc gctcgggacc
     3061 ggctggggct cggtcggcat cggcatcgtc gccggactgg cgatcggggc gctcggcggg
     3121 gccgccaatg gcgcgctggt gacggtcggc cggatcgagc cgttcatcgt gacgctgggc
     3181 tcactcggca tcttccgcgc cctcatcacc ttccttgcca atggcggcac gctcaatctc
     3241 aacgacgccg ccaacgatac ctattcgccg ctgtattccg gcagcgtgct gtgggtgccg
     3301 atgccgatcg tgatcttcgc ggtggtcgcg atcatcgccg aaatcgcgat gcgccggacg
     3361 acgttcgggc gccacatcgc cgccatcggc tcgaacgagc aggtggcgcg ctattcggcg
     3421 atcaaggtcg atcgcgtgcg gttcatgacc tacgcgctgc agggcatgct ggtcgggctg
     3481 gcgtcggtgc tctacgtgcc gaagttcggg tcggccaaca gttccaccgc ggtgctgtgg
     3541 gagctgcagg cgatcgccgc ggtgatcatc ggcggcacga cgctgcgggg cggcttcggc
     3601 cgcatctggg ggacggtggt cggggtcatc atcctcgagc tcatcggcaa catcctcaac
     3661 ctgcagagct tcatcagccc ctatctcaac caggcgttcc agggcgccat catcatcgtc
     3721 gccgtgttgc tgcagcgcac ccggcgcacg accagctgaa accgagtttt acgcaacgcc
     3781 cgcgaacggg catcaacggg aggaatacga ttatgcatct gctcaaaacc acggccgtcg
     3841 tggctctggt cgccgccggg ctgggcttcg gctccgtcgc cttcggccag gacaagacct
     3901 acaccatcgg cgtttcggtg ccgaccgccg accacggctg gaccggcggc gtcgacttct
     3961 tcgcgcagca ggccatcgac cggctgagca aagcctaccc gaacgtcaag ttcgtgctgg
     4021 cgacggcgcc cgattcgacc aagcaggcgg ccgacctcga ggacatggtc acgacccgca
     4081 acatcgatgg cctcgtcatc ctgccgggcg acccggacgc catgaccgcc tcgatcaaga
     4141 aggtgaagga cgccggcaag tgggtgacga tcgtcgatcg cgccctcagc cagccgggca
     4201 ttcccgacct ctacgtggcc ggcgacaatc ccgggctcgg tgcgaccacc gctgcgtact
     4261 tcaagcaggc gatgccgaat ggcggcaaca tcgtggtgct gcgcggcgca ccgatcccga
     4321 tcgacaagca gcgcgtcgac gccttcatgg ccggcatcgc cggcaccaac atcaaggtgc
     4381 tcgacagcca gttcgccaac tggaaccgcg acgatggcta caagatcatg caggatatgc
     4441 tgaccaagta taacaacatc gacgccgtct ggtgccagga cgacgacacg ctggtcggcg
     4501 tgctcaaggc gctcaaggaa gccaacaaca ccaagatctg ggcggtcggc ggcgccggca
     4561 tgaaccagat catcaagatg gtggaagccg gctcgaccca ggttccggtc gacgtttcct
     4621 acaacccgaa catggtggcg accgccatcg acctgacgac gctgcatttt gcggcgggcg
     4681 cccaggtcga cggcaatttc atcatcaact cgtcgctgat caccaaggat aacgccaagg
     4741 acttcgacta cgccaacacg ccgttctgat cgaacggaca cctagcagca gggccgcccg
     4801 agcgatcggg cggcctttgc cgtctctggc cggtcaggtg cctggcttgt agcccttgac
     4861 ggccgcggcg aagatcgccc gcagggcgtc ggacgcggga agctcctcga tggtgccgtc
     4921 gttgctcagc gtcacggtgc caaggtcatc gagggcgtcg gcggggtcgc cgccaaagat
     4981 atcgcgactg acggcgctgc cgtcgaccag cggcgtcggc atcggcgtcg ccgtgccggg
     5041 aagcaccagc ggaccggccc ggcttgccgc ttcgttggcg ggcggctggt agccgggagt
     5101 ggagtccgcg gcgagcgcgg gcgttgccac ggccagcgcc gcgctgaccg tcaggagtgt
     5161 cgcaatcata agaatacggg tggtcatttc atgctccata gacaagcgga gcgggagaga
     5221 atccgctttc gaatgagcgt aggacggcgg cggacggcgc ctccttggtc ggaccgggac
     5281 gggcggttcg cgtcgcgtca gtcgtcgaag cggacggcac cgatgtgcgg caggttgcgg
     5341 ttgcgctggg cgtagtcgat gccgtagccg acaacgaatt tgtcggggat ctcgaagccg
     5401 atccagcggg ccttgacgtc gacttcgcgg cgcgacggct tgtcgagcag ggcgcacact
     5461 tcgacccggc gcgggtggcg ggtcttgagg atgtcgagca cgtggcgcag cgtgcggccg
     5521 gtgtcgacga tgtcctcgac caccaggata tcgcggcctt cgatttcgcc gcgcaaatcc
     5581 ttgaggatgc gcacctcgcg gctcgattcg gtggcgttgc cataggacga gacctcgagg
     5641 aaatcgacct cgaccggcag atcgagctcg cgcacgaggt cggcgatgaa gatgaacgag
     5701 ccgcgcagca gcccgacgac caccagcttg tcggtgccgt ggaaatagtc ggaaatctcg
     5761 cgcgccaggg cttcgacgcg ggcggcgatg gctttggccg agatcatctg atcgacggca
     5821 tagggcctgg cagtcatcgg tggaatcctt ggaggcgggt caacacttgg cgaaatagcg
     5881 atagatgtcg ggcgctgcca tccagataaa atcatgggtg agaccgccat gcgccttgat
     5941 ccaggcgcgg atgtcgccct ggtaggccgc ccagagcgtc gcggtggcgc tgtcgaggcc
     6001 ggcgagatgg aaaccgaatc gggcctgcgg ggtcacgcag attcgactcc gcgggatgtg
     6061 gccgagcagc acggtgcacg ccgactggca ggggccgacg atgcggacgc tgacaccctc
     6121 ggcggcaagg cccgcccagc gcgcatcgta ctgggcgaca ctgccgccgt ggtcgtcgta
     6181 aacgtcgatg gtccgggcca ttgcgggggc gacggcgagg agcagcaggg cgagcaccgc
     6241 aagcaatcgg accatggcgc acctccgtcg cgagaccgcc gaggctagca taaacgtgat
     6301 cgagggtggg cgcggcggcg ccaaacatta cgcagttgta aatttcgggc gaaacccgtg
     6361 caaacggctg gctctagaaa ccgtgtcgtc gatgcggggt gcatcgatct ccgatcctca
     6421 gcgctaccgg atcggcgaag ccaatgctga acacggagaa atcaaatgcg caaattcgtt
     6481 cttcccatcg ccctgatcgc ctcgctcgcc gtctcgtccg tggccatggc tgccacggcc
     6541 ccggccgccg caccggcgcc caagagcacc acgacgatcg gcaaagtgct ggccgtcagc
     6601 accaagttct gcaccgtcac ggtggccaac aagggcgtct tcatcttcgg agcgaagtgc
     6661 aacctcgcca agatcaaggt cggcgacaag gtggagatca cctggtggct gaagggcgcc
     6721 ctgcgcgagg cgaccaagat caccgacgac ggcgccgcca agatgatgcc gatgatgacg
     6781 aagtaagctg ccggcatcgg ccagcgacac ggagcggacg cccggcgtcc gctctttttg
     6841 tttgcgctgc ctgccttgct cgccgttgcc cgcgaccgca gttctccaaa gcgtcgcctc
     6901 acgcctcgat attggcgaag gcgacgcccc atggaaaaat ttctacgtcc acggaactta
     6961 ttggttgtca tgtcattttt atagctgacg gggtggggaa ggggccattt tgccgtgtcg
     7021 tcacccgggg cgcctctgca tgccagctag ccaaccgatc ctcgaattcg gccagatggg
     7081 ctacgtcata aaggcgcatg actggtccgc cagcggtcta gggcccccgg aactctggcc
     7141 tgctgccctc aggctcgccg ttggcatgtg cctccgatcc gagttgctga cgacggtcta
     7201 ttggggacgc gacttccggc tgttctacaa cgatccaacc atccgcctgc tgggggacaa
     7261 gcatccccag gccctgggcc gtcccgcccg agaggtttgg gctgatacct ggcccgagct
     7321 ggggccgcta tatgagcgcg tgatgtccga agggcgtgag gtgggcggca ccaatcgccg
     7381 cttctcgctc gacagcaacg ggcagcggac cgaatcctac ttcagctatt ccttcgcgcc
     7441 gatcgtggaa gaagatggca atgtgggcgg catctttgcg caggcgcgcg agaccacgcc
     7501 ggtcgtcctc agggagcgct cgctcagcgc cgaccgccag cggctcaggg agatgttcga
     7561 gcaggcgccc gggctgttcg cgctgctgcg cggacctgag catgcgatcg agttcctcaa
     7621 tcctgctgcg gcagcgctga tcgggcagcg cgacaccatc ggcaagccgg tgcgcgaggc
     7681 gcttccggag atcgaagccc agggtttcgt gcaattgctg gaccaggcct tttcgacggg
     7741 gcaggccgtg tccggcacct cgatgccggc gtcgatcgat cgcgctggcg accagccaaa
     7801 cgacctccgc tatctggacc tggttttcca gccgttgacg actgcggacg ggaccgtgga
     7861 cggcatcctg gtccagggca tggatgtcac cgagcgcttc accgccgccg cggcgctggg
     7921 cgagagcgaa gagcgctttc ggctgatcgc ggagaaagcg cccgtgatgc tctggatgag
     7981 cgatccaaac ggcaagtgcc tctacctcaa caccgcgctg cgagacttct ggagcgtcag
     8041 gcccgaggac gttctgagct tcgactggaa cccgaccatc catcccgacg acgtcgcgcc
     8101 gctcgccatc ccgtggatgg agggcatgca gaatcgcacg ggtttcaccg tcgaggcgcg
     8161 ctaccgccgt gcggacggga aatatcgggt gctgcacacc acggcccagc cgcgtttcgg
     8221 accgggccgg agctttctcg ggatgatcgg cgtcaatgtc gacgtgaccg agacgcggcg
     8281 gatcgaaacg gcgctgcgcg acctgaacga aacgctcgaa gcgcgggtta cggaggaaat
     8341 cgccgtacgc cgccaggccg aggcggcgct gcagcaggcg cagaagatgg aagcgatcgg
     8401 ccagttgacc ggcggcgtcg cgcacgactt caacaacctg ttgcaggtga tcggcggcaa
     8461 tctccagctt ctcgccaagg atgttgccgg aaccgagcgg gccgagaagc gcgtctcgaa
     8521 cgcactcgag ggcgtcaggc gcggcgccaa gctggccagc cagctgctcg cattcggccg
     8581 caggcaggcg ctcgagccgc gagcggtcaa tgtcggccgc ctggtcgtcg ggctcgacga
     8641 gatgcttcgc cgcacgctcg gggaatccat cgaggtcgag accgtcatcg cgggaggact
     8701 gtggaactgc ctggtcgacc cgtcgcagat cgagaacgcc gttttgaacc tcgccctcaa
     8761 tggtcgcgac gccatgccgg gcgggggcag gctgacgatc gaggcaggga acgcttcgat
     8821 cgacgaaagc tatgcgcgca cgatccccga cgcgaccccc gggcagttcg tcctgctggc
     8881 ggtgaccgat accggaaccg gcatcccccc ggaaacgctc gagcacgtct tcgagccgtt
     8941 ctttaccacc aaggcggaag gccgcggcac cggcctgggc ctgtcgatgg tttacggtct
     9001 ggtcaagcag tcgggcggtc acgtgcgcat ctacagcgaa gttggccacg gcacgaccgt
     9061 caagctctat ctgccgcgcg tcatggccga agaggacccg cagcggcttc cggagaccgg
     9121 agcggtggaa ggcgggcagg agaccatcct cgtggccgag gacgacgaag gcgtgcgcga
     9181 aacggtggtg gagatcctca ccgagctcgg ctatcgggtg ctgaaggcca aggacgccgc
     9241 ttcggccctc acggtcatcg agagcggcgc tcccgtcgac ttgctgttca ccgacgtggt
     9301 catgcccggg ccactgaaga gcccggacct cgcccggcgg ttgcgcgaca gccatccgca
     9361 gatcggcgtt ctatttactt ccggatacac ccagaacgcg atcgtccatg acggcaagct
     9421 cgatgccggc atcgaactgc tgcccaaacc ctatacgcgc gaggatctcg cccgcaggat
     9481 tcgccgcatc ctggggtcgc ggccgctgcc accagcggcg cagcccgcca cggctccatc
     9541 tcaggcgccg gcgcgatcgg cgctgaccat cctgttcgtc gaagacgagg caatcatccg
     9601 attgagcacc ggcgagctgc tcagggacat ggggcatgtc gtgatcgaag cgggagacgg
     9661 cgccgaggcg gcacggatac tcgagacgac cgccgtggat ctgctgatca ccgatctggc
     9721 gctccccggc ctgccgggga gcgacgtggc ccgccgggcc cgagagcttt atccgaacgt
     9781 cgggctggtc atcgcgagcg gtcgggtgga gcgaacccag accgctgacc tcccaggcgt
     9841 ggtcctgctt gccaagccct atgacgacaa ggcgctggcc cgcgcggtcg cacaggcgac
     9901 cagcaggaat agcggcaata cggacgccga gaccctgcag gacatgtgac ggtccgcgtc
     9961 gcgggtcgct ggcgggctgc agggacgcga agggcagtgg tgggcccggc aggactcgaa
    10021 cctgcaacca gaccgttatg agcggtcggc tctaaccatt gagctacagg ccctgccgcc
    10081 tcattagcag gcaggggcgg cgctgcaaga gccatcagcc gtcgcgggcg gcttcctgca
    10141 gctgggcgag ctcggattcg gcgcgcaggg cgcggtcgcg ccattcttcg atggcgaggc
    10201 cctccagccg ggccagaggc atcgctggtg gggcctcgtt tggctcgaac gtcacgttca
    10261 tcagcttgct gtgcaacgcc tcgacatagg cggcatcctc cggatcgagc cggtcggccc
    10321 gccagtcggc gaggatgcgg ttgagttcga gcgtggtttc atcgttgata tcgccacggg
    10381 caaggagttc ggcgacgag
//
LOCUS       DATAZA010000031        10618 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3251817, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000031 DATAZA010000000
VERSION     DATAZA010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 10618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10618
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3251817"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..577)
                     /locus_tag="VHZ56_00775"
     CDS             complement(<1..577)
                     /locus_tag="VHZ56_00775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020049355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HEX4296532.1"
                     /translation="MRRVVVTGLGTVNPLGCGVEITWANILASKSGARRIDDFRVDDI
                     SCQIAHRIPLGPLSEGKFDADDWMDPKEQRKVDPFIVFGMAAAAMAIEDAGAIPRTQD
                     EQERTGVLIGSGIGGVGTIYDASVTLHEKGPRRVSPFFVPGRIINMVSGNVSIRFGLK
                     GPNHSVVTACSTGAHAIGDSWRIIAMGDADVM"
     gene            complement(626..862)
                     /locus_tag="VHZ56_00780"
     CDS             complement(626..862)
                     /locus_tag="VHZ56_00780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEX4296533.1"
                     /translation="MSDIADRVRKIVVEHLNVDADKVVDKASFIDDLGADSLDQVELV
                     MAFEEEFSVEIPDDAAESIQTFGDAVSYLTKAVG"
     gene            complement(1081..1821)
                     /gene="fabG"
                     /locus_tag="VHZ56_00785"
     CDS             complement(1081..1821)
                     /gene="fabG"
                     /locus_tag="VHZ56_00785"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014285323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HEX4296534.1"
                     /translation="MFELTGKRALVTGASGGIGREIARQLAAAGARVALSGTRVAALE
                     DTARGMAGSDHPILPANLADLAAVDGLVPAAESALGGLDILVNNAGMTRDNLFMRMKN
                     EEWDEVLAVNLTAAFHLTRAVLRGMMKQRFGRIISIASVVGVAGNPGQANYAASKAGL
                     IGMSKSLAQEVASRNITVNAIAPGFVSSAMTDELNDKQREAILGKVPAGRLGTAAEVA
                     GCAVFLASDAAAYITGHTLNVNGGMLMI"
     gene            complement(1848..2798)
                     /gene="fabD"
                     /locus_tag="VHZ56_00790"
     CDS             complement(1848..2798)
                     /gene="fabD"
                     /locus_tag="VHZ56_00790"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEX4296535.1"
                     /translation="MTRRAFTFPGQGSQAVGMGKDLAVAFPEARAVFDEVDAALGDKL
                     SAIMFEGPAETLQLTENAQPALMAVSMAVIRVLEAKGVRVNHAAAYVAGHSLGEYSAL
                     CAAGVFSLADAAQLLRTRGRAMQQAVPVGQGAMAAILGLDLETVLRAVNDAGDGEVCG
                     VANDNAPGQVVISGHAAAVARAIELLKAAGARRALPLPVSAPFHCALMRPAADAMEHA
                     LATVRMNAPVVPVVANVTATPTSDPDAIRRHLVAQVTGMVRWTESIKWLVVEGGVTEL
                     YELGSGKVLTGLAKRIVPDTAATAVNSPADIDALVAALTA"
     gene            3123..3530
                     /gene="rpsF"
                     /locus_tag="VHZ56_00795"
     CDS             3123..3530
                     /gene="rpsF"
                     /locus_tag="VHZ56_00795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEX4296536.1"
                     /translation="MPLYEHIYLARQDVSPQQVEEMTTNLTQVLTSGGGKVTKNEYWG
                     LKSLSYRIKKNRKAHYSLLNIDAPAPAVAEMERQMRINEDILRFMTVRVDALEEGPSA
                     MLQKRDRDDDRSDRPGGRPDRGGFGGERRPRRF"
     gene            3555..3803
                     /gene="rpsR"
                     /locus_tag="VHZ56_00800"
     CDS             3555..3803
                     /gene="rpsR"
                     /locus_tag="VHZ56_00800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003496832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEX4296537.1"
                     /translation="MKDLTTSQARRPFQRRRKTCPFSGPNAPKIDYKDVRLLQRYVSE
                     RGKIVPSRITAVSAKKQRILAQAIKRARFIGIMPYAVS"
     gene            3934..4509
                     /gene="rplI"
                     /locus_tag="VHZ56_00805"
     CDS             3934..4509
                     /gene="rplI"
                     /locus_tag="VHZ56_00805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018697868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEX4296538.1"
                     /translation="MKVILLERVGKSGHIGDEVTVKDGYARNFLLPQHKALRATEANR
                     KKFEVDRVSIEKRNAERREAAAGIASGLNGKTVVIIRQAGETGQLYGSVSSRDVADAL
                     SADGYSVARSQVDLANPIKTVGVHSVALHLHAEVAVSVNVNVARSDDEAERQSKGEDL
                     TVPTFDDEAKEAFAESQAEVGSAASEGGGDE"
     gene            complement(4564..5007)
                     /locus_tag="VHZ56_00810"
     CDS             complement(4564..5007)
                     /locus_tag="VHZ56_00810"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX4296539.1"
                     /translation="MALDENSTPTLIDHVGWRLWRLARRWKEEFDSDMLARGYPWVTE
                     ARGAIIGHLRAGGLPQSELSGALAVSKQAVQQFVDDLVEEGAVERVDNPEDGRGKLVR
                     LTPRGLAFIVDGNAVKREIERRYRNRIGRQRFDVLNAALDDLAGD"
     gene            5007..5471
                     /locus_tag="VHZ56_00815"
     CDS             5007..5471
                     /locus_tag="VHZ56_00815"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX4296540.1"
                     /translation="MTSYLDADSQVELTITPTDGDYKSLPRKVPNLPKIENGTRPGVE
                     LHGVSFTPIASPSLGSSEMSMWRAHVLPGEGVLHHMTREEIILAVGGAGVIRIGGEVH
                     QLTPGDAFAVPAFTDFRLECANADHFEAVVALPVGGRAVIGNQPSFAPPWSI"
     gene            complement(5474..6007)
                     /locus_tag="VHZ56_00820"
     CDS             complement(5474..6007)
                     /locus_tag="VHZ56_00820"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEX4296541.1"
                     /translation="MALKSSSSQYGRVAILIHWSSALAVILAFAAGFVVANVAAPAQQ
                     APILIVHIVLGLIVFALTLLRIAWWLTADRHPAPPADQPRWQQRTATAVHLGLYVLLV
                     LMATSGIATLLLSGALPAILAGGPVPDLSALIPRIAHGIMSKILLALFVVHFGAALYH
                     QFVRRDRLLARMGVGHA"
     gene            6076..6510
                     /locus_tag="VHZ56_00825"
     CDS             6076..6510
                     /locus_tag="VHZ56_00825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX4296542.1"
                     /translation="MDTDYDRDASFGYLTNLASRLFVRALERRVPGGAIGPMPVFIAL
                     QNGEALPQKELARLAAVEQPTMANTLARMARDGLVAGEPDPDDGRSTLLRLTALGQER
                     AQVALAAAKTVNTLAAGALGAGERAIYLDLVKRIIARLEADS"
     gene            6700..8190
                     /locus_tag="VHZ56_00830"
     CDS             6700..8190
                     /locus_tag="VHZ56_00830"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEX4296543.1"
                     /translation="MADSNVARIRPADEKSFRLAPHNIEAEQALLGAILVNNEAFYRV
                     SDFLAPEHFYEPVHREIYEVAGKIVRAGKAATPITVKTYLPDALTADVTMQSYLSRLG
                     SEATTVLNAADYGQAIYDLAIRRNLIQIGEEMTATAYDADVEMTAPKQIEEAEKSLFD
                     LAEKGQYNGGFQGFNEALTEAIKMAGEAYQRDGTLSGMATGLTDLDRMMGGLQKSDLI
                     IVAGRPGSGKSSLGANIAFNVARAWRSETLADGHLKTVDGGRVAFFSLEMSAEQIATR
                     ILAEQAEISSSDIRRGNIHESQFGRLVDVSNMIATLPLYIDDSGGLSISQLAARARRL
                     KRQKGLDLLVIDYIQLLSGSSRKANENRVQELTEITTTLKALAKELEVPIIGLAQLSR
                     AVEQRDDKHPQLSDLRDSGSIEQDADVVLFIYREEYYLKNKEPKEGTPEHLTWQGEME
                     KVHGRAEVIIGKQRHGPTGTVQLSFEAQFTRFGNLARDSYLPERFQ"
     gene            8187..9341
                     /gene="alr"
                     /locus_tag="VHZ56_00835"
     CDS             8187..9341
                     /gene="alr"
                     /locus_tag="VHZ56_00835"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEX4296544.1"
                     /translation="MMPSPAITTGYGCRLTVDLGALIRNYQALEKVSAGALCAAVVKA
                     DAYGTGLDAACRAFYFAGARFFFVATPDEALTVRAALPDAYVFVLDGLFPGAAPLYVG
                     ERLMPVLSSLPMLEEWLVACLGRNEALPAALHFDTGMNRLGFRLNETSIVKRMCDEVG
                     YAPQMIMSHLACADQPQHEKNRAQLALFSSVATQFPGIPASLANSAGTMSSREMHFQM
                     VRPGIALYGGRAVNGRRNPMVPAVTLEAPILQVHEARTGESVGYGATYTLTRDSRIAV
                     VGIGYADGFLRSLGATNQHAGGRVFARGQVVPVIGRVSMDMCAVDITDLGNDIPVPGE
                     MVEVLGSHVSVDDQADPGGTIGYEILTSLKGRYTRGYIDSSATEGPVESA"
     gene            9459..>10618
                     /gene="radA"
                     /locus_tag="VHZ56_00840"
     CDS             9459..>10618
                     /gene="radA"
                     /locus_tag="VHZ56_00840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEX4296545.1"
                     /translation="MPKAKTAYVCQSCGTAHVRWQGRCEGCGEWNSIVEELVDSGVGA
                     GPKMATAGGRPAELVPLSGETESAARVTTGLGELDRVTGGGFVMGSAVLVGGDPGIGK
                     STLLLQAAAALANAGKRVVYVSGEEAVAQIRLRAQRLGLGGAEVQLASETNVEIILST
                     LQAGPAPHLVIIDSIQTLWTDRVDSAPGTVTQVRTSAQALTRFAKKSGAAVVLVGHVT
                     KDGQIAGPRVVEHMVDAVLYFEGDASHTFRILRGVKNRYGATDEIGVFEMTTLGLKEV
                     ANPSALFLDQRDRDAAGSAVFAGMEGTRPVLCEIQALVAPSPLGTPRRAVVGWDASRL
                     SMVLAVLETRCGVRIGANDIYLNVAGGLKVNEPAADLAVAAALISSLSNSPLP"
BASE COUNT         1774 a         3539 c         3619 g         1686 t
ORIGIN      
        1 gcatcacgtc ggcatcgccc atggcgatga tgcgccagct gtcgccgatg gcatgggcgc
       61 cggtcgagca ggccgtcacc accgaatggt tggggccctt gaggccaaag cggatcgaga
      121 cgttgcccga gaccatgttg atgatgcggc cgggcacgaa gaacgggctg acgcggcgcg
      181 gacccttctc atgcagggtc accgaggcgt cgtaaatagt gccgacgccg ccgatgccgg
      241 agccgatgag gacgccggta cgctcctgct catcctgggt cctggggatg gcgcccgcgt
      301 cctcgatcgc catggccgcc gccgccatgc cgaagacgat gaacggatcg accttgcgct
      361 gctccttggg gtccatccag tcgtcggcat cgaacttgcc ctcgctcagc gggccgagcg
      421 ggatgcggtg ggcgatctgg caggagatgt cgtcgacgcg aaaatcgtcg atgcgccgcg
      481 ccccgctctt ggatgcgagg atgttggccc aggtgatctc tacgccgcat ccgagtgggt
      541 tgaccgttcc cagtcccgtc acgacaacgc ggcgcagttc catcggtgat gccgttccgg
      601 cggcgggacg ggccgaacgc ccggcttagc cgacggcctt ggtgagatag ctgaccgcat
      661 cgccgaaggt ctggatcgac tcggcggcgt cgtcggggat ttcgaccgag aattcttctt
      721 cgaaggccat caccagttcg acctgatcga gggaatcggc acccagatca tcgatgaagc
      781 tggccttgtc gacgaccttg tccgcatcga cgttgagatg ctccacgacg atcttgcgga
      841 cgcggtcagc gatatcgctc atagtttgac ttcccttttc gatagtctgg ttcggttcgt
      901 tttcgtcgcg cccgagcgct cgttggttct ggccggtgtt ctggccggcg cgaccttagg
      961 cggggttgct tacgcccgca agtcagccgg ggcccctcgg atcaaggggc ggcaactaac
     1021 atactcgtcc gggtttgacc atattgcggc cagcgctgcg cacaaccggg gttttccgcg
     1081 tcagatcatc agcatgccgc cgttgacgtt gagggtgtgt ccggtgatgt aggcggcggc
     1141 atccgaggcc agaaacaccg cgcagccggc aacttccgcg gctgtcccca gccgcccggc
     1201 gggcactttg ccgaggatcg cctcgcgctg cttgtcgttg agctcgtcgg tcatggcgga
     1261 ggagacaaag cccggcgcga tggcgttgac ggtgatgttg cgcgaggcaa cctcctgggc
     1321 cagcgacttg gacatgccga taagcccggc cttggaggct gcgtagttcg cctggccggg
     1381 gttgccggcg acgccgacca ccgaggcgat gctgatgatg cggccgaagc gctgcttcat
     1441 catgccccgc agcacggcgc gggtcaggtg gaacgcggcg gtgaggttga cggcaaggac
     1501 ctcgtcccat tcctcgttct tcatgcgcat gaagaggttg tcgcgggtca tgccggcgtt
     1561 gttgacgagg atgtcgaggc cgccgagcgc cgattcggcg gccggcacca gtccatcgac
     1621 ggcggcgagg tcggcgaggt tcgcgggcag gatcggatga tcgctgcccg ccatgccgcg
     1681 cgccgtgtcc tcgagggcgg cgacgcgggt gccgctcagc gccacgcggg caccggccgc
     1741 ggcgagctgc cgggcgatct cgcggccgat gccgcccgag gcgccggtca ccagtgcgcg
     1801 tttgcccgtg agttcaaaca tttgacggct ccgtcgaaga aactgaatca ggcggtcaac
     1861 gcagcgacca gcgcgtcgat gtcggccggc gaattgacgg cggtggcggc agtgtccggc
     1921 acaatgcgct tggcgagtcc cgtcagcacc ttgccggagc cgagctcgta aagctccgtg
     1981 acgccgccct cgaccaccag ccatttgatg ctttcggtcc agcgcaccat gcccgtcacc
     2041 tgcgcgacca gatgccggcg gatcgcgtcc gggtcgctgg tcggcgtcgc ggtgacgttg
     2101 gcgacgaccg ggacgaccgg cgcgttcatc cggacggtgg ccagcgcgtg ctccatggca
     2161 tcggcggccg ggcgcatcag cgcgcagtgg aacggggcgc tcaccggcag gggcagcgcg
     2221 cgcctggcgc cggccgcctt cagcagctcg atggcgcggg cgaccgccgc ggcgtggccg
     2281 gagatcacca cctgccccgg ggcgttgtcg ttggcgacgc cgcagacctc gccgtcgccg
     2341 gcatcgttga ccgcccgcag caccgtctcg agatcgagcc cgaggatcgc cgccatggcg
     2401 ccctgcccca ccggcaccgc ctgctgcatg gcccggccgc gggtgcggag cagttgcgcg
     2461 gcgtcggcga gcgaaaacac gcccgcggcg cagagggcgg aatattcgcc gagcgagtgg
     2521 ccggcgacat aggctgcggc atggttgacg cgcacccctt tggcttcgag cacgcggatc
     2581 accgccatcg agaccgccat cagcgccggc tgggcgttct cggtgagctg cagcgtctcg
     2641 gccggacctt cgaacatgat ggcgctcagc ttgtcgccga gcgcggcgtc gacttcgtcg
     2701 aacacggccc gcgcctcggg gaaagcgacg gccaggtcct tgcccatgcc gaccgcctgg
     2761 ctgccctgcc cgggaaaggt gaacgcgcgc ctggtcatga ttgcccgcct tttgtgccag
     2821 cctagaagca gcctcggccg ccttcaagcc gcgggccttg ccggaggggt ggcgaggagt
     2881 caagctggcc gccgcgcgcc gccgaggttc ggcttgcttt cgcccccctt ttcccctatc
     2941 tcccgcctgc attcgttcgg ccgggggctg aacggagggt ctggctcgtc gcaaggcagt
     3001 cagatagggg ttcgccccgg cctcccgtgt tcccgctctt tagaagactg ctttgtcgcc
     3061 tttccggctt caaagaggct ccgcgccgca cgatgcgagt gaaaccagaa ggaaggcgct
     3121 tcatgcccct ctacgagcat atctatctgg cccgccagga cgtctcgccg cagcaggtcg
     3181 aggaaatgac caccaacctg acgcaggtgc tgacgtcggg cggcggcaag gtcaccaaga
     3241 acgaatactg gggcctcaag tccctctcct atcgcatcaa gaagaaccgc aaggcgcatt
     3301 acagcctgct caacatcgat gccccggcgc ctgccgtggc cgagatggag cggcagatgc
     3361 ggatcaacga ggacatcctg cgcttcatga ccgtgcgggt cgacgcgctc gaggaaggcc
     3421 cctcggcgat gctgcagaag cgcgaccgcg acgacgaccg gtcggaccgt ccgggcggcc
     3481 gcccggatcg tggtggcttc ggcggcgaac gccgtccgcg ccggttctga gacaaaggat
     3541 aaagagcaat ggccatcaaa gacctcacca cctcgcaggc ccgccgtccg ttccagcgcc
     3601 gccgcaagac ctgcccgttc tcgggcccga atgcccccaa gatcgactac aaggacgtcc
     3661 ggctgctgca gcgctatgtt tccgagcgcg gcaagatcgt gccgtcccgc atcacggcgg
     3721 tgtcggccaa gaagcagcgc attctcgccc aggcgatcaa gcgcgcccgc ttcatcggca
     3781 tcatgcccta cgcggtcagc taagacctcg catcgacccg ttggagtggc ggatggtccg
     3841 ccgctcctaa ccggcccaat tctgcgcatc gccctttccg aaaaccggag cttttcaggg
     3901 ccatgcgaga ccgggacagc aaaggataaa gacatgaaag tcattctgct cgagcgggtc
     3961 ggcaagtccg gccacatcgg cgacgaagtc accgtcaagg acggctatgc ccgcaacttc
     4021 ctgttgccgc agcacaaggc gctgcgcgcc acggaagcca accgcaagaa gttcgaggtc
     4081 gatcgcgtct cgatcgagaa gcgcaatgcc gagcgccgcg aggcggccgc cggcatcgcc
     4141 tccggactca acggcaagac cgtggtcatc atccggcagg ccggcgagac cggccagctc
     4201 tacggctcgg tcagttcccg cgatgtcgcc gatgcgctca gcgccgacgg ctattcggtg
     4261 gcgcgctcgc aggtcgatct cgccaacccg atcaagacgg tgggcgtcca ttcggtggcg
     4321 ctgcacctgc acgccgaggt cgcggtgtcg gtcaacgtca acgtcgcccg ctcggacgac
     4381 gaggccgagc ggcagtccaa gggcgaggac ctgacggtgc cgaccttcga cgacgaagcc
     4441 aaggaggcgt tcgccgagag ccaggcagaa gtcggctcgg cggcgtccga gggcggcggc
     4501 gacgaatgag cgcttgcgcc catcgatgaa ttgcaaaggc cgggagcgat cccggccttt
     4561 tgcttagtcg cccgcaaggt cgtccagcgc cgcgttgagg acgtcgaatc gttgccggcc
     4621 gatccggttg cggtagcgcc gctcgatctc tcgctttacg gcgttcccgt cgacgatgaa
     4681 ggcgaggcct cgaggcgtca gccgcaccag tttgccccgt ccgtcctccg ggttgtcgac
     4741 gcgttcgacg gcgccctcct ccacgaggtc atcgacaaac tgctgcaccg cctgcttgct
     4801 cacagccagc gcgcccgaca gttccgactg cggcagcccg cctgcccgca aatgcccgat
     4861 aatggctccg cgcgcctcgg tcacccacgg atagccgcgc gccagcatgt cgctgtcgaa
     4921 ctcttccttc caccgccggg cgagtcgcca cagccgccac cccacgtggt cgataagtgt
     4981 cggtgtcgaa ttttcgtcaa gcgccattga ccagttatct cgatgctgat agtcaagttg
     5041 agttgacgat aactccaaca gacggcgact acaagtcgtt gccgcgaaag gtacccaact
     5101 tgcccaagat tgaaaacgga acacgtcccg gcgtcgaact tcacggcgtc agctttacgc
     5161 ccatcgcttc gccaagcctc ggatccagcg agatgtcgat gtggcgggcc catgtgctgc
     5221 cgggcgaagg cgtgctccat cacatgaccc gcgaagagat catccttgcc gttggtggcg
     5281 cgggggtcat ccgcatcggc ggcgaggtcc accaactcac cccgggtgat gccttcgctg
     5341 tccccgcgtt caccgatttc cggctggaat gcgccaacgc cgatcatttc gaggcggtgg
     5401 tggcgctgcc ggtcggcggc cgcgcggtga tcggaaacca gccgtccttc gcgccgccct
     5461 ggagcatctg agtctaagcg tggccgacgc ccatccgggc cagcaggcgg tcgcggcgga
     5521 cgaactggtg gtagagcgcc gcgccgaaat ggacgacgaa aagcgccagc aggatcttgc
     5581 tcatgatgcc gtgggcgatc cgcgggatca gggcggagag gtcgggaacc gggccgccgg
     5641 cgaggatcgc cggcagcgcc cccgacagca gcagcgtggc gatgccgctg gtcgccatca
     5701 gcaccaggag gacgtagagc ccgaggtgca cggccgtggc ggtccgctgc tgccagcgcg
     5761 gctggtcggc cggcggggcc ggatggcgat cggcggtgag ccaccaggcg atacgcagca
     5821 gggtcagggc aaagacgatc aggccgagca cgatgtggac gatcaggatc ggcgcctgct
     5881 gcgccggcgc ggcgacattg gcgaccacga agccggcggc gaacgccagg atgacggcca
     5941 gcgcgctcga ccagtggatg aggatcgcga cgcggccgta ctgggacgaa ctgctcttca
     6001 aggccatggt gaagctcctt gcatcggtgt ccttcgcgtg attgcatagc acactatgta
     6061 actggatagc aagctatgga taccgactac gaccgggacg cctcgttcgg ctacttgacc
     6121 aacctcgcct cgcggctgtt cgtgcgggcg ctcgaacgcc gggtccccgg cggcgccatc
     6181 gggccgatgc cggtgttcat cgcgctgcag aacggcgagg cgctgcctca gaaggagctg
     6241 gcgcggctcg cggcggtcga gcagccgacg atggccaaca ccctcgcccg catggcgcgg
     6301 gacgggctcg tggcggggga gccggatccg gacgatggcc gcagcaccct gctccgactc
     6361 acggcgctgg ggcaggaacg ggcacaggtc gccctcgctg ccgccaagac cgtcaacacc
     6421 cttgcggcag gcgcgcttgg ggccggggaa cgggcgatct atctcgacct cgtcaagcgg
     6481 atcattgcca gactcgaagc cgacagctag ctgagcgaca cggaatcgcg ttgaggcagc
     6541 cgggccacac cacaagcgcc cgcctcagtt tcccccagta tcaacggtag ttcacatgcc
     6601 ggcggccgcg gcggcgcgat ggcctctatc ggcgcttccg atgggcggcc ggtacggtta
     6661 atgaaccctt aaggggcaag gcggaacatc tgattcatca tggctgactc aaacgtcgcg
     6721 cgcattcgtc cggcggacga aaaaagcttt cgcctcgcgc cgcacaacat cgaggcggag
     6781 caggcgctgc tcggtgccat cctcgtcaac aacgaggcgt tttaccgtgt ctccgatttc
     6841 ctcgcgccgg agcatttcta tgagccggtg caccgcgaga tctacgaggt cgccggcaag
     6901 atcgtgcggg ccggcaaggc ggcgacgccg atcacggtca agacctacct gcccgacgcc
     6961 ctgaccgccg acgtcaccat gcaatcgtac ctcagccgcc tcggcagcga ggcgacgacg
     7021 gtgctcaacg ccgccgatta cgggcaggca atctacgacc tcgccatccg ccgcaacctg
     7081 atccagatcg gcgaggagat gacggcaacg gcctatgacg ccgacgtcga aatgaccgcg
     7141 cccaagcaga tcgaggaagc cgagaagtcg ctgttcgatc tggccgagaa gggccagtac
     7201 aatggcggct tccagggctt caacgaggcg ctgaccgagg ccatcaagat ggccggcgaa
     7261 gcctatcagc gtgacggcac gctgtcgggc atggcgaccg gccttaccga tctcgaccgc
     7321 atgatgggcg ggctgcagaa gtccgatctc atcatcgtgg cgggccgccc cggttcgggc
     7381 aagagctcgc tgggcgccaa catcgccttc aacgtcgccc gcgcctggcg ctcggagacg
     7441 ctggccgacg gccacctcaa gaccgtcgat ggcgggcgcg tggcgttctt ttcgctcgaa
     7501 atgagcgccg agcagatcgc cacccgcatc ctcgccgagc aggcggagat ttcctcgtcg
     7561 gacatccggc gcggcaacat ccacgagagc cagttcggcc ggctcgtcga tgtctccaac
     7621 atgatcgcga cgctgccgct ctacatcgac gacagtggcg gcctgtcgat cagccagctc
     7681 gcggcgcggg cgcggcgcct gaaacggcag aaggggctcg acctcctcgt catcgactac
     7741 atccagctgc tgtcgggctc atcgcgcaag gccaacgaga accgcgtgca ggagctgacg
     7801 gagatcacca cgacgctcaa agcgctggcc aaggagctcg aggtgccgat catcgggctg
     7861 gcgcagctca gccgcgccgt cgagcagcgc gacgacaagc atccgcagct ctccgacctc
     7921 cgcgactccg gctcgatcga gcaggacgcc gacgtggtgc tcttcatcta tcgcgaggag
     7981 tactacctca agaacaagga gcccaaggag ggcacgcccg agcacctgac gtggcagggc
     8041 gagatggaga aggtgcacgg ccgcgccgag gtcatcatcg gcaagcagcg ccacggcccg
     8101 acgggcacgg tgcagctcag tttcgaggcg cagttcaccc gcttcggcaa cctcgcccgc
     8161 gactcctacc tgccggaaag atttcaatga tgccctcgcc ggcgattacg acgggttatg
     8221 gctgccggct gacggtcgac ctgggcgcgc tgatccgcaa ctaccaggcg ctggagaagg
     8281 tgtcggccgg ggcgctctgc gccgcggtgg tcaaggccga cgcctacggg accgggctcg
     8341 atgcggcctg ccgggctttc tacttcgccg gggcgcggtt cttcttcgtc gccacccccg
     8401 acgaggcact gacggtgcgg gcagcgttgc cggatgccta tgtcttcgtg ctggacgggc
     8461 tgtttcccgg cgcggcgccg ctgtatgtcg gcgaacggct gatgccggtg ctgagctcgc
     8521 tgccgatgct ggaagagtgg ctcgtcgcct gcctcgggcg caacgaagcg ctgccggcgg
     8581 cgctgcattt cgacaccggc atgaaccggc tcggcttccg gctcaacgag acctcgatcg
     8641 tcaagcggat gtgcgacgag gtcggctacg cgccgcagat gatcatgagc cacctcgcct
     8701 gcgccgacca gccgcagcac gaaaagaacc gggcgcagct ggcgctgttc agctcagtgg
     8761 cgacgcagtt tccaggcatc cccgcttcgc tcgccaattc ggcgggcacc atgagcagcc
     8821 gcgagatgca cttccagatg gtgcgtcccg gcatcgcgct ctatggcggc cgcgccgtca
     8881 acggccggcg caacccgatg gtgccggcgg tgacgctgga ggccccgatc ctgcaggtgc
     8941 acgaggcgcg gaccggagaa tcggtgggct acggggcgac ctacacgctc acccgcgaca
     9001 gccgcatcgc ggtggtgggc atcggctatg ccgacggctt cctgcgttcg ctcggcgcca
     9061 ccaaccagca tgccggcggc cgggtattcg cgcgcggcca ggtcgtgccg gtgatcggcc
     9121 gggtgtcgat ggacatgtgc gccgtcgaca tcacggatct tgggaacgac attccagtcc
     9181 ccggcgagat ggtcgaagtg ctggggtcgc acgtctcggt cgacgaccag gccgatccgg
     9241 gcggcaccat cggctacgag atcctgactt cgctcaaggg ccgctacacg cgcggctaca
     9301 tcgacagcag cgccaccgag gggccggtcg agagcgcctg aggcgcgatc gagggctcag
     9361 cgcccagcca cgcggtcgcc acgtccctgg tgttcaccct tcgttcttta ctccgggcgc
     9421 aggctgacct acaagagcag gcgaacccgg aagcgtcgat gcccaaagcc aagaccgcct
     9481 atgtctgcca gtcctgcggc acggcgcatg tgcgctggca gggccggtgc gagggctgcg
     9541 gcgagtggaa ctcgatcgtc gaggagctgg tcgattcggg cgtcggcgcc ggaccgaaga
     9601 tggcgaccgc cggtggccgg ccggcggagc tggtaccgct ttcgggcgag accgagagcg
     9661 cggcgcgggt gacgaccggg ctcggcgagc tcgaccgggt gaccggcggc ggcttcgtga
     9721 tgggttcggc ggtgctggtg ggcggcgatc ccgggatcgg caagtcgacc ctgctgctgc
     9781 aggccgcggc ggcgctggcc aatgcgggca agcgcgttgt ctatgtttcg ggcgaagagg
     9841 cagtggcgca gatccggctc cgggcgcaac ggctcgggct cggcggcgcc gaggtgcaac
     9901 tggccagcga gaccaatgtc gagatcatcc tgtcgacgct gcaggccggc ccggcgccgc
     9961 atctggtgat catcgattcc atccagacgc tgtggaccga ccgggtcgac agcgcgccgg
    10021 gaacggtgac gcaggtgcgc acctcggcgc aggcgctgac gcggttcgcg aagaaatccg
    10081 gcgccgccgt ggtgctcgtc ggccacgtca ccaaggacgg ccagatcgcc gggccgcggg
    10141 tggtcgagca catggtcgac gcggtgctgt atttcgaggg cgacgccagc cacaccttcc
    10201 gcatcctgcg cggggtcaag aaccgctacg gcgccaccga cgagatcggg gtgttcgaga
    10261 tgacgacgct ggggctcaag gaagtcgcca acccctcggc gctgttcctc gaccagcgcg
    10321 accgcgacgc ggcgggctcg gcggtgttcg cgggcatgga aggcacgcgc ccggtgctgt
    10381 gcgaaatcca ggcgctggtg gcgccctcgc cgctcggcac gccgcggcgc gccgtcgttg
    10441 gctgggacgc ctcgcggctg tcgatggtgc tggcggtgct ggagacccgc tgcggggtgc
    10501 ggatcggggc caacgacatc tacctcaatg tcgccggcgg gctgaaggtc aacgaaccgg
    10561 cggccgacct cgccgtggcg gcggcgctga tttcgtcgct cagcaattcg ccgctgcc
//
LOCUS       DATAZA010000032         1974 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2555253, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000032 DATAZA010000000
VERSION     DATAZA010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1974
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2555253"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            7..204
                     /locus_tag="VHZ56_00845"
                     /pseudo
     CDS             7..204
                     /locus_tag="VHZ56_00845"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
     gene            334..1911
                     /locus_tag="VHZ56_00850"
     CDS             334..1911
                     /locus_tag="VHZ56_00850"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008833834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019200 - carbohydrate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY-family carbohydrate kinase"
                     /protein_id="HEX4296546.1"
                     /translation="MSDLLVAVDVGTGSARAGVVSATGTLLGRAERAIDMRRTDANHA
                     EHNSEQIWSAICNAVRAAIVAARADPSRIAGISFDATCSLVVRDTNGAPLPVGDGDRD
                     WDTIVWLDHRALDEAAECTATGHRVLDSIGDVMSPEMEVPKLMWLKRHLPGTWAKAGY
                     LFDLADFLTWRASGSTARSQCTLTCKWTWLGNAGGWQQDFLDTVGIGDLRERGKLPDA
                     ASPIGTDLGPLTAEAAEALGLTTACRVGLGLIDAHAGALGTLGAFAGDVGSIHRHLAL
                     IAGTSSCVMALSPDARPAHGIWGPYPGAVLPDAWLNEAGQSATGALLDHLIRWHGAGG
                     EPTPEMHQRIAARVMHLRSIDGVGFARRLHVLPDFHGNRSPIADPSALGVISGLTLDS
                     DFDSLCRLYWRTCVGIALGVRHILETLNEKGFAIGTLHVTGGHTRNPLLMELYADATG
                     CIVVEPATEDATLLGTAIVAATAAGLYGTLNAAAMAMQQGGSSRRPDPATRAQFDRDY
                     RVFLAMLEQRQALDTMQ"
BASE COUNT          301 a          745 c          637 g          291 t
ORIGIN      
        1 ctcgagatcg ccgggctcaa cgagcggttc cagcccgcga tcttttccgc cacgatggtc
       61 gcgaacggca agccggctcc cgacctgttt ctcgcggcgg cagcgcagat gggcgtggcg
      121 ccccaggact gcctcgtcgt cgaggacagc ccggccggca tcattgccgc caagaaggcg
      181 ggcatgcgcg tctgcgcctt caccggcggc ggccacatcg cgctctccgg cctcggcaac
      241 cagatcgccg cactccatcc cgacgccagc ctgagcgaca tgcgggagct tccggcgctg
      301 ctggaacagc tgccggcaag gaccccgagc gggataagcg acctgctcgt cgcggtcgac
      361 gttggcacgg gcagcgcccg cgccggagtg gtcagcgcca ccggcacgct gctcggccgc
      421 gccgagcgtg ccatcgacat gcgccggacc gacgccaacc acgccgagca caattctgag
      481 cagatctgga gcgccatctg caacgccgtc cgtgccgcca tcgtcgcggc gcgcgccgat
      541 ccgtcacgga tcgccggcat cagcttcgat gccacctgct cgctcgtcgt ccgcgacacg
      601 aacggcgctc cactgccggt gggcgacggc gaccgcgact gggacaccat cgtctggctc
      661 gaccaccgcg cgctcgacga ggccgccgag tgcaccgcca ccggccatcg cgtcctcgat
      721 tcgatcggcg acgtcatgtc gccggagatg gaagtgccaa agctgatgtg gctgaagcgc
      781 cacctgcccg gaacatgggc caaggccggc tatctcttcg acctcgccga cttcctgact
      841 tggagggcct cgggctcgac cgcccgctcg caatgcaccc tcacctgcaa gtggacctgg
      901 ctcggcaacg ccggcggctg gcagcaggac ttcctcgata ccgtggggat cggcgacctc
      961 cgcgaacgcg gcaagctgcc tgacgcggcc agccccatcg gtaccgatct cggaccgctc
     1021 accgctgaag ccgccgaggc gcttggcctc accactgcgt gtcgcgtcgg gctcgggctg
     1081 atcgacgccc acgccggcgc cctggggacg ctcggcgcct ttgccggtga cgtcggctcg
     1141 atccaccggc accttgccct catcgccggc acctcgagct gcgtgatggc gctgtcgccg
     1201 gatgcccgac cggcgcatgg catctggggt ccctacccgg gcgcggtgct gcccgatgcc
     1261 tggctcaacg aggccggcca atccgctacc ggtgcactgc tcgaccacct gatccgctgg
     1321 cacggcgccg gtggcgagcc cacgccggaa atgcaccagc gcatcgccgc gcgggtcatg
     1381 cacctgcggt cgatcgacgg cgttggattc gcgcggcggc tgcacgtgct gcccgatttt
     1441 cacggcaacc gttcgcccat cgccgatccg agcgcgctcg gcgtcatctc gggactgacc
     1501 ctcgacagcg acttcgacag cctctgccgg ctctactggc ggacctgcgt cggcatcgcg
     1561 ctgggagtac ggcatatcct cgagacgctg aacgagaagg gcttcgccat cggcacgctg
     1621 cacgtcaccg gcggccacac ccgcaatccg ctgctgatgg aactctatgc cgacgccacc
     1681 ggctgcatcg tggtggagcc ggcgaccgag gacgcaacgc tgctcggcac cgccatcgtg
     1741 gcggccaccg ccgccggcct ttacgggacg ctcaatgccg ccgcgatggc gatgcaacag
     1801 ggcggcagct cgcgccggcc agatccggca acccgcgccc agttcgaccg cgactaccgc
     1861 gtgttcctgg ccatgctgga gcagcggcag gcgctcgaca caatgcagtg agcgaccggc
     1921 ccgacctagc cgtggttgat catcacgtgc cgcaccaccg tgtagtcctc gagc
//
LOCUS       DATAZA010000033         5534 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_350198, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000033 DATAZA010000000
VERSION     DATAZA010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5534
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_350198"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1449
                     /gene="ureC"
                     /locus_tag="VHZ56_00855"
     CDS             <1..1449
                     /gene="ureC"
                     /locus_tag="VHZ56_00855"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020808771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009039 - urease activity [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit alpha"
                     /protein_id="HEX4296547.1"
                     /translation="VGLKDGRIAGIGKAGNPDTQPGVTIIIGPSTEAIAGEGRILTAG
                     GFDAHIHFIAPQQIEEALMSGVTTMLGGGTGPAHGTLATTCTGAWHAERMIEAFDAFP
                     MNLALAGKGNASKPAPLEEMLLSGVAALKLHEDWGTTPAAIDNCLSVADRFDVQVMIH
                     TDTLNESGFVEDTVAAFKGRTIHAFHTEGAGGGHAPDIIKVAGLPNVIPSSTNPTRPY
                     TVNTLAEHLDMLMVCHHLSPQIAEDVAFAESRIRKETIAAEDILHDMGAFSIISSDSQ
                     AMGRVGEVLIRCWQTADKMKKQRGRLPEETGDNDNFRVRRYIAKYTINPAIAHGMSQH
                     IGSVEVGKRADLVLWSPAFFGVKPEMVLLGGSIAAAPMGDPNASIPTPQPMHYRPMFA
                     SYGKLVGTSAVVFTNQAALDAGLPGRLGTAKKMLAVNNTRGGIGKAAMVHNSATPHIE
                     VDPETYEVRADGELLTCEPATVLPMAQRYFLF"
     gene            1449..2105
                     /locus_tag="VHZ56_00860"
     CDS             1449..2105
                     /locus_tag="VHZ56_00860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014327281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296548.1"
                     /translation="MTIYLPSTGPEGWQRLLADPYKHWRTGFSAKAVAHCWEAASGLP
                     PEIDALLGGGTELLFATPEHKVPLPGGRRASQCDVFALVRRSDETISVAIEAKVDEPF
                     GPVLSEWLSDDSEGKRQRLDAILTMLGASEPPLSLHYQLFHRTAAAIVEARRFKTDAA
                     AMIVHSFSSTVRWFDAFAAFAEFLGISCSVGDAGTTILFDGRPLTIGWAKGDPKFLTI
                     "
     gene            complement(2119..2832)
                     /locus_tag="VHZ56_00865"
     CDS             complement(2119..2832)
                     /locus_tag="VHZ56_00865"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HEX4296549.1"
                     /translation="MLDTFLVLTGPTELPILSGRLTECNPEAQLVPVRSHEDLLGISD
                     AVLARSRLIGFATPVIVPPRVLGALGHGAYNFHPGPPEFPGLCPASYAVFTQARRFGV
                     TAHRMVERVDAGPIVGLITFGVAPSASVRDLELLSYRALARLFWQLAPLLAMLPEPLE
                     ELPVRWGPLKSSRRSAAALCEIGPAIGRDELDRLVAAFGSGPFGLAPTINLHGHRFRL
                     VSEPPGEISAEPEQKPLAS"
     gene            3064..3402
                     /locus_tag="VHZ56_00870"
     CDS             3064..3402
                     /locus_tag="VHZ56_00870"
                     /inference="COORDINATES: protein motif:HMM:NF021390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HEX4296550.1"
                     /translation="MAALASPALADVGVSLGLSITGESEIKIVKYDCDDHSAITVQYI
                     NAGPNDLAVVPVKEGTLVFAGVVAGSGTKYVAGPYEWFTKGQDASLQDVTEGLDAAPV
                     MRCSEENDTP"
     gene            3475..3915
                     /locus_tag="VHZ56_00875"
     CDS             3475..3915
                     /locus_tag="VHZ56_00875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018858239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreE"
                     /protein_id="HEX4296551.1"
                     /translation="MLRATTPLPANHGKGKPFDRLTLTHDQRRLRRRLLTLSAGEEIM
                     VDFAEPVTLEHFGGLLLEDGRVVEIVAAPEPLYEVSASSAEHLSRLAWHIGNRHMSAQ
                     IEKKRILVPRDHVARTMLAGLGAELREVLEPFAPERGAYHEHAH"
     gene            3912..4568
                     /locus_tag="VHZ56_00880"
     CDS             3912..4568
                     /locus_tag="VHZ56_00880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011426535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory UreF family protein"
                     /protein_id="HEX4296552.1"
                     /translation="MSAALQRLATWFSPAFPVGTFAWSQGLETAIADGRVTTAATLRD
                     WLAGALAHGGLRTDAIILAQAHRAHTDADALRELADLMLALTAASERRLETTLTGEAF
                     AIAARAWPSDVFARLPDPCPYPVAAGAVAGAAGIALDDLLPVYLTAAVQTQVSVAVRL
                     VPLGQTAGLQVIAGLEAMVATAAAEAASASLDDIGGIAYAADIAQMRHETIEPRIFRS
                     "
     gene            4565..4996
                     /locus_tag="VHZ56_00885"
     CDS             4565..4996
                     /locus_tag="VHZ56_00885"
                     /inference="COORDINATES: protein motif:HMM:NF024559.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3995 domain-containing protein"
                     /protein_id="HEX4296553.1"
                     /translation="MNMLVGSLTFLPLLAAALAHLLWSLGSTWPIRNEQLLVQTVVGT
                     PGATRMPNRLVIFVVALLILAAGLVALSISDHDSGGLLWTLIGAVLAIVFLGRGLAGY
                     TPGWRARHSGEPFATLDRKTYSPLCLWVGVGFVLLVAMRLM"
     gene            4993..>5534
                     /gene="ureG"
                     /locus_tag="VHZ56_00890"
     CDS             4993..>5534
                     /gene="ureG"
                     /locus_tag="VHZ56_00890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreG"
                     /protein_id="HEX4296554.1"
                     /translation="MTSFNGPLRVGIGGPVGSGKTTLCEMLLKAMRDRYSMAVVTNDI
                     YTREDALILSRVQAIGEDRIVGVETGGCPHTAIREDVSLNLAAIADLNRRIPGLDIVL
                     IESGGDNLSATFSPDLADLTLYVISVAEGEKIPRKGGPAITRSDLLIINKADLAPYVN
                     ASLEVMETDTVRVREGRPYV"
BASE COUNT          914 a         1979 c         1788 g          853 t
ORIGIN      
        1 gtcgggctca aggacggccg catcgccggc atcggcaagg ccggcaatcc cgacacccag
       61 cccggcgtca ccattatcat cggcccgtcc accgaggcga ttgccggcga aggcaggatc
      121 ctcaccgccg gcggcttcga cgcccacatc cacttcattg cgccgcagca gatcgaggaa
      181 gcgctgatga gcggcgtcac caccatgctg ggcggcggca ccgggccggc gcacggcacg
      241 ctggcgacga cctgcaccgg cgcctggcac gccgagcgga tgatcgaggc gttcgacgcc
      301 ttcccgatga acctcgcgct cgccggcaag ggtaacgcca gtaagcccgc gccgctcgag
      361 gaaatgctgc tgtccggcgt cgcggcgctg aagctgcacg aggactgggg cacgaccccg
      421 gccgccatcg acaactgcct gtcggttgcc gaccgcttcg acgtgcaggt gatgatccac
      481 accgacacgc tcaacgaatc gggtttcgtc gaggacaccg tcgccgcctt caagggccgc
      541 accatccacg ccttccacac cgaaggcgcc ggcggcggtc acgcgccgga catcatcaag
      601 gtcgccggcc tgccgaacgt cattccatcc tcgaccaatc cgacccgccc ctacaccgtc
      661 aatacgctgg ccgagcatct cgacatgctg atggtctgcc accacctcag cccgcagatc
      721 gcggaggacg tggccttcgc cgagagccgc atccgcaagg aaaccatcgc cgccgaggac
      781 atcctccacg acatgggcgc gttctcgatc atctcatcgg acagccaggc gatggggcgc
      841 gtcggcgagg tgctgatccg ctgctggcag accgccgaca agatgaagaa gcagcgcggc
      901 cggctgccgg aagagaccgg tgacaacgac aatttccgcg tccgccgcta catcgccaaa
      961 tacaccatca atccggcgat cgcccatggc atgagccaac acatcggctc ggtggaagtg
     1021 ggcaagcgcg ccgacctggt gctgtggtcc cccgccttct tcggcgtgaa gcccgaaatg
     1081 gtgctgctcg gcggctcgat cgccgccgcg ccgatgggcg accccaacgc ctcgatcccg
     1141 acgccgcagc cgatgcacta ccggccgatg tttgcgagct acggcaagct ggtcggcact
     1201 tcggcggtgg tgttcaccaa ccaggcggcg ctcgacgcgg gactgcccgg ccggctcggc
     1261 acggccaaga agatgctggc ggtgaataac acccgcggcg gcatcggcaa ggcggcgatg
     1321 gtccacaaca gcgccacgcc gcacatcgag gtcgaccccg agacctacga agtccgcgcc
     1381 gacggcgagc tgctcacgtg cgagccggca accgtcctgc cgatggccca gcgctacttc
     1441 ctgttctgat gacaatctac ctcccctcga ccggaccgga aggctggcaa cggcttctcg
     1501 ccgatcctta caagcactgg cgaacgggct tttcggcgaa ggcagtggcc cactgttggg
     1561 aggcagccag cggcctgccg ccggagattg atgctcttct tggcggaggc accgagctct
     1621 tgttcgcaac tcccgagcac aaggtcccgc ttcccggtgg ccgccgagcc agtcaatgcg
     1681 acgtgttcgc tcttgttaga aggagcgacg aaaccataag cgtcgcgatc gaggccaagg
     1741 tcgacgaacc gttcggtccc gtgctcagtg agtggctgtc agacgacagc gaaggcaagc
     1801 ggcagagact tgacgcaata ctgaccatgc tcggggcatc ggaaccaccg ctgtcgcttc
     1861 actaccagct gtttcatcgg acagctgctg cgattgttga agcgcgacgg ttcaagactg
     1921 acgccgcagc gatgattgtg cattcgttct cgtcgaccgt ccgctggttc gatgcatttg
     1981 cggcgtttgc ggaatttctg ggaatctcgt gctccgtcgg cgacgccgga acgacgatct
     2041 tgttcgatgg acggccgctc acgatcggat gggccaaggg tgacccgaag ttcctgacga
     2101 tttgacgcgc ggctgtttct agctcgccag cggcttctgc tccggctcgg ccgatatctc
     2161 gccgggcggc tcgctgacca gccggaaacg gtggccgtgc agattgatcg tcggtgcgag
     2221 cccgaagggg ccactgccga atgccgccac cagccgatcg agctcgtcgc ggccgatcgc
     2281 cgggccgatt tcgcagagcg ccgccgccga ccggcgcgag ctcttgagcg gcccccagcg
     2341 caccggcagc tcctccagcg gctcgggcag catcgccagc agcggcgcca gctgccagaa
     2401 cagccgggcc agcgcgcggt acgacaacag ctcgagatcg cggacgctgg ccgacggggc
     2461 gaccccgaag gtgatgaggc cgacgatcgg ccccgcatcg acccgctcga ccatccggtg
     2521 cgccgtgacc ccgaagcgcc gcgcctgcgt gaacaccgca taggacgccg ggcagaggcc
     2581 ggggaactcc ggcggccccg gatggaaatt gtaggcgccg tggccgagcg cccccagcac
     2641 ccggggcggc acgatgaccg gcgtggcaaa gccgatcagg cgcgatcgtg cgagaaccgc
     2701 gtccgaaatg ccgagcagat cctcgtgcga acggaccggc acgagctgcg cctccggatt
     2761 gcactccgtc agccgtcccg acaggatcgg cagctcggtc ggccccgtca gcaccagaaa
     2821 agtgtccagc atgccgcccc gcgcccggcg cgactctcgc tgccgggatg acggagcctg
     2881 cgacccgaac tttgcgccgg cctaaacccg ggattaactc gctgccccgc gcccgcgtcc
     2941 cttggtcgca gcgcggaccg accctgccgg tcgcgcaagt cgccaaacca accgcaatct
     3001 cctatcgtca ccgcctgctt ctggagattc gaaatgcgcc tgagccttgc tctagcagcg
     3061 gccatggccg cgcttgcctc gcccgcgctg gccgacgtcg gcgtcagcct cgggctcagc
     3121 atcaccggcg agtccgagat caagatcgtc aaatacgact gcgacgacca cagcgccatc
     3181 accgtgcagt acatcaacgc cggccccaac gacctggccg tggtcccggt caaggaaggc
     3241 acgctggtgt ttgccggcgt cgtcgcgggg tccggcacca agtacgtcgc cgggccctat
     3301 gaatggttca ccaagggcca ggacgcgagc ctgcaggacg tcaccgaggg tctcgatgcg
     3361 gcgccggtga tgcgctgctc ggaagagaac gacacgccgt gagatcgccg gcgcgccttt
     3421 gaaagcgccg cccgatccgc tagagtttct gcgagttcga cacccgcggg accgatgctg
     3481 cgcgcgacca cgcctctgcc ggccaaccat ggcaagggaa agccgttcga ccggctgacg
     3541 ctgacgcacg accagcggcg gctgcggcgt cgcctgctga ccctgtcggc gggcgaagag
     3601 atcatggtcg attttgccga gccggtgacg ctcgagcatt tcggcggcct gttgctcgag
     3661 gatggccggg tcgtggagat cgtcgccgcg cccgagccgc tctacgaggt gagcgccagc
     3721 agcgcggagc acctgagccg cctcgcctgg cacatcggca accgccacat gtcggcgcag
     3781 atcgaaaaga agcgcattct ggtgccgcgc gatcacgttg cgcggacgat gctcgccggc
     3841 ctcggcgccg agctgcgcga agtgctcgag ccgttcgccc ccgagcgcgg cgcctatcac
     3901 gagcatgccc attgagcgcg gcgttgcagc ggctcgccac ctggttctcc ccggccttcc
     3961 cggtcgggac cttcgcctgg tcgcagggcc tcgagaccgc gatcgccgat ggacgggtca
     4021 ccacggcggc aacgttgcgc gactggctgg ccggcgccct cgcgcatggc ggccttcgca
     4081 ccgacgccat catcctggcc caggcgcatc gcgcccacac tgacgccgac gcgctgcgcg
     4141 aactcgccga cctgatgctc gcgctgaccg ccgcgagcga gcgtcgcctc gaaaccacgc
     4201 tgaccggcga ggcgtttgcc atcgccgccc gcgcctggcc ctccgacgtc ttcgcgcgcc
     4261 tgcccgaccc ctgcccgtat ccggtagcgg cgggcgccgt cgccggcgcc gccggcatcg
     4321 ctctcgacga cctgctgccg gtgtatctca ccgccgcggt gcagacccag gtgtcggtcg
     4381 cggtgcgcct cgtcccgctt gggcagacag ccgggctgca ggtcatcgcc gggcttgagg
     4441 cgatggtcgc gacggccgct gccgaagccg cgtcggcgag cctcgacgac atcggcggga
     4501 ttgcctacgc cgccgatatc gcgcagatgc ggcacgaaac catcgaaccg cggattttcc
     4561 ggtcatgaac atgctggtcg gatcgctgac cttcctgccg ctgctggcgg ccgcgctggc
     4621 gcacctgctg tggtcgctcg gcagcacctg gccgatccgc aacgagcaac tgctggtgca
     4681 gaccgtcgtc ggcactcccg gcgccacccg catgcccaac cggctggtga tcttcgtcgt
     4741 cgcgctgctg atccttgcgg ccggcctcgt ggcgctgtcg atctccgacc acgacagcgg
     4801 cggcctgctg tggacgctga tcggcgccgt gctcgcgatc gtctttctcg gccgcggcct
     4861 cgccggctac acccccggat ggcgggcccg gcattcgggc gagcccttcg ccaccctcga
     4921 ccgcaagacc tattcgccgc tctgcctgtg ggtcggggtc ggtttcgtgc tcctcgttgc
     4981 catgaggctg atgtgacttc gttcaacggt ccattgcgcg tcggtatcgg cggcccggtc
     5041 ggatcgggca agacgacgct gtgcgagatg ctgctcaagg cgatgcgcga ccgctactcg
     5101 atggcggtgg tgaccaacga catctacacc cgcgaggacg cgctgatcct gagccgggtg
     5161 caggcgatcg gcgaggaccg cattgtcggg gtcgagaccg gcggttgccc gcacacggcg
     5221 atccgcgagg acgtgtcgct caacctcgcg gcgatcgccg atctcaaccg ccgcattccc
     5281 ggcctcgaca tcgtgctgat cgagtcgggc ggcgacaatc tcagcgccac cttctcgccc
     5341 gatctcgccg acctgacgct ctacgtcatc tccgtcgccg agggcgaaaa gatcccgcgc
     5401 aagggcggcc cggcgatcac ccgctccgac ctgctgatca tcaacaaggc cgacctcgcg
     5461 ccctacgtca acgccagcct cgaagtgatg gagaccgaca cggtccgggt gcgcgagggg
     5521 cggccctatg tctt
//
LOCUS       DATAZA010000034         3914 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2671382, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000034 DATAZA010000000
VERSION     DATAZA010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3914
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2671382"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..381)
                     /locus_tag="VHZ56_00895"
     CDS             complement(<1..381)
                     /locus_tag="VHZ56_00895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013420995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HEX4296555.1"
                     /translation="MTATESASARFAGIDDWSTLDLVDGMVESQFGAVAAVRAARDDL
                     ARAVDAMADRLGRGGRIIYMGAGTSGRVGAQDGAELPPTFSWPYERAVSLMAGGAGAL
                     QRAVENAEDNREAAVADLDALQLTG"
     gene            complement(463..1302)
                     /locus_tag="VHZ56_00900"
     CDS             complement(463..1302)
                     /locus_tag="VHZ56_00900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006121514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX4296556.1"
                     /translation="MIRDTTIGAKLWSTAIWVVLGFFLLNLLAMIATVLIDSFATRWL
                     GTWLPVGLTTKWYASAWDEFQLDQVLIATFEIVFTVVVLAGLLGVTAAYAMARREFPG
                     KRLAMLLFLLPLLVPPITYGIPMATVLYQVGVGGTFWGVVLANLVPTVPFVILVMIPF
                     VEQIDPKIEAAARVFGAGTLRLFWHVLLPMLLPGILAALLLVLVRTVAMFELTFLAAG
                     PTSQTLVVVLYYSVFAPGVRAVQSVDAMAVIYMVTTLVWLLIALRFVNPTQIVARARQ
                     PTN"
     gene            complement(1299..2189)
                     /locus_tag="VHZ56_00905"
     CDS             complement(1299..2189)
                     /locus_tag="VHZ56_00905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008127456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX4296557.1"
                     /translation="MIAAADRIGLRQRLSLRGLDGTTLLIVPALLFLIAVFVYPFLYG
                     LWLSFSPKTGDWLANYAAFFSDPFQYDTIWTTLALALPVTIISLLVALPVAFRVRLLR
                     RQRLLTTLLVLPVTLGTVLVAQGLLNYLGPQGWFSRTLLFLHLIHSPARLTHNYWGVF
                     ASLLITGFPFTFLLTLGYVTGIDPALEQAAATHGAGAWQRFRHVLLPLLVPGLAISFL
                     LSFVQSFAVFPSAILLGAPAGPTRVISVAAYHAAFEQYDYSMASAIAMIMAAVQLVIV
                     VVVLGLRSLFYRGATSGGKG"
     gene            complement(2186..3244)
                     /locus_tag="VHZ56_00910"
     CDS             complement(2186..3244)
                     /locus_tag="VHZ56_00910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006472241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4296558.1"
                     /translation="METPSFNEIRLDRVSRSFGSFAALREVSLAIRRGEFIALLGPSG
                     CGKSTALNCIAGLLATTGGGIYVDDRRIDQLKPEERGFGMVFQNYALFPHMSVRANVG
                     FGLRMRHVAKAELDRRVDAALELVRLGTQGDKLPGQLSGGQQQRVAIARAIVIEPPLV
                     LMDEPLSNLDAKLRLEMRAEIRRIHNQLGSTTIYVTHDQDEALSLADRVVVLRDGEIR
                     QVGLPEELYESPAHLDVAEFMGFRNRLRGTVTSLDGGRASITVGGATLGGRAAAGIKT
                     GEPALLMARPDDVRVGPGGLAATVESVEYRGREFVGIARAADGTEMVFHGSERVAPGS
                     TVALLVDPARAIAFPAVP"
     gene            complement(3329..>3914)
                     /locus_tag="VHZ56_00915"
     CDS             complement(3329..>3914)
                     /locus_tag="VHZ56_00915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX4296559.1"
                     /translation="MGLPYLLGDSDPKDPVKGWDKTWAYLKELGQYIEYYPTGTGALM
                     KELGEGTRAMTVTTTGWDINPRVLGTVPAEAKVGKLDGFHWVADAHYMIVPKGVSDDK
                     LAVLLDLMKYMLTPAAQAVTYDQGYFYPGPAVKDVPLSMAPQDSQDAINQFGRPEYAD
                     WIANNPIETPLLPVDMVKAFDIWDKQVGGDQIQK"
BASE COUNT          683 a         1265 c         1426 g          540 t
ORIGIN      
        1 gccggtgagc tgcagcgcat cgaggtcggc gactgcggct tcgcggttgt cctcggcgtt
       61 ctcgacggcg cgctgcaagg cgccggcgcc gccggccatg aggctgaccg cccgctcgta
      121 gggccagctg aaggttgggg gcagttcggc gccgtcctgc gcgccgacgc ggccggaggt
      181 gccggcgccc atatagatga tccggccgcc gcggccgagg cggtcggcca tcgcatcgac
      241 ggcgcgggcc agatcgtcgc gcgcggcacg caccgcagcg acggcgccga actggctctc
      301 gaccatgccg tcgacgaggt ccagcgtcga ccagtcgtcg atgccggcaa agcgggcgga
      361 agcggattct gtggcggtca tgggaggtcc gttgcgatgc aggaccgcga tgctatacgc
      421 gaaatgccgg cgacagaacc agcggcgcgg caggcggcgg gctcagttcg tgggctggcg
      481 ggcacgcgcg acgatctgcg tcggattgac gaagcgcagc gcgatcagca gccagaccag
      541 cgtcgtcacc atgtagatca ccgccatggc gtcgaccgac tgcaccgccc gtacaccggg
      601 cgcgaacacc gagtaataga gcaccaccac cagcgtctgg ctggtcgggc cggccgcgag
      661 gaaggtcagc tcgaacatcg ctacggtgcg caccagcacc agcagcaggg cggcaaggat
      721 gccgggcagc agcatcggca gcagcacgtg ccagaacagc cggagcgtgc cggcgccgaa
      781 gacgcgggcg gccgcctcga tcttgggatc gatctgctcg acgaacggga tcatcaccag
      841 gatgacgaac ggcacggtcg gcacgaggtt ggcgagcacg acgccccaga aggtgccgcc
      901 gacgccgacc tgatacagca ccgtcgccat cgggatgccg taggtgatgg gcggcaccag
      961 cagcggcagc aggaacagca gcatggcaag gcgcttgccg gggaactcgc ggcgggccat
     1021 ggcataggcg gcggtgacgc cgagcaggcc ggcgaggacg acgaccgtaa agacgatctc
     1081 gaaggtcgcg atcagcacct ggtcgagctg gaactcgtcc caggccgagg cgtaccattt
     1141 ggtggtgagt cccaccggca gccaggtccc cagccagcgg gtggcgaacg aatcgatgag
     1201 gacggtcgcg atcatcgcca gcaggttgag caggaaaaat cccaggacca cccagatggc
     1261 ggtgctccac agcttggcgc cgatggtggt gtcgcggatc atcctttgcc acccgaggtg
     1321 gcgccgcgat agaacaggct tctgaggccg agcacgacga cgacgatgac cagctgcact
     1381 gcggccatga tcatggcgat cgctgaggcc atcgagtagt cgtattgctc gaaggcggca
     1441 tggtaggcgg cgaccgagat gacccgcgtc gggccggccg gcgcgccgag caggatggcg
     1501 gacgggaaca ccgcgaagga ctgcacgaac gacagcagga acgagatggc gaggcccggc
     1561 accagcagcg gcagcagcac gtggcggaac cgctgccagg cgccggcgcc gtgcgtggcg
     1621 gccgcctgct cgagcgccgg atcgatgccg gtgacatagc cgagggtgag caggaaggtg
     1681 aaggggaagc cggtgatcaa cagcgacgcg aagacgcccc agtaattgtg ggtcaaccgc
     1741 gccgggctgt ggatcaggtg caggaacagc agggtgcgcg agaaccagcc ctgcggcccc
     1801 agatagttga gcagaccctg cgccacgagc acggtcccca gcgtcaccgg cagcaccagc
     1861 agcgtggtca gcagccgctg ccggcgcagc aggcggacac ggaaggcgac gggcagcgcc
     1921 acgagcaggc tgatgatggt gaccggcagg gccagcgcca gcgtcgtcca gatggtgtcg
     1981 tactggaagg gatcggaaaa gaaggcggca tagttggcca gccagtcgcc ggtcttgggc
     2041 gaaaagctga gccagagccc gtagaggaac ggatagacga agacggcaat caggaacagc
     2101 agcgccggca cgatcagcag cgtggtgccg tcgaggccgc gcagcgacag ccgctgccgg
     2161 agcccgatgc gatcagcggc ggcgatcacg gcaccgccgg aaaggcgatg gcacgggcgg
     2221 gatcgaccag cagcgcgacg gtgctgcccg gcgctacccg ctcgctgccg tggaacacca
     2281 tttcggtgcc atcggcagcg cgggcgatgc cgacgaattc gcggccgcgg tactcgacgc
     2341 tctcgactgt ggccgcgagg ccacccggtc cgacgcgtac gtcgtcgggg cgggccatca
     2401 gcagggccgg ctcgccggtc ttgatgccgg ccgccgcccg gccgccgagc gttgcgccgc
     2461 cgaccgtgat cgaggcacgg ccgccgtcga gcgatgtgac ggtgccgcgc agccggttgc
     2521 ggaagcccat gaactcggcg acgtcgaggt gcgccgggct ctcgtacagc tcctcgggca
     2581 gtccgacctg gcggatttcg ccatcgcgca gcaccaccac gcggtcggcg agcgacagcg
     2641 cctcgtcctg gtcgtgcgtc acgtagatgg tggtcgagcc gagctggttg tggatgcgcc
     2701 ggatttcggc acgcatctcg agccgcaact tggcgtcgag gttgctgagc ggctcgtcca
     2761 tcagcaccag tggcggctcg atgacgatgg cgcgggcgat ggcgacgcgc tgctgctggc
     2821 cgcccgagag ctggccgggc agcttgtcgc cctgggtgcc gagccgcacc agctcgagcg
     2881 cggcgtcgac gcgccggtcg agctcggcct tggcaacgtg gcgcatgcgc aggccgaagc
     2941 cgacattggc gcgcacgctc atgtgcggga acagcgcata gttctggaac accatgccga
     3001 agccgcgctc ctcgggcttc agctggtcga tgcggcggtc atcgacgtag atgccgccgc
     3061 cggtggtggc gagcaggccg gcgatgcagt tgagcgccgt cgacttgccg cagccggagg
     3121 ggccgagcag cgcgatgaac tcgccgcgcc ggatggcgag gctcacctcg cgcagcgccg
     3181 caaagctgcc gaagctgcgg ctcacccggt cgaggcggat ttcgttgaag gacggcgtct
     3241 ccacggcact cccaccctgt cgccggaacc gcccggtcac aagtcgcaaa acgggcgggg
     3301 cagcgatcgc cccgcccgca agggtacgct atttctggat ctggtcgccg ccgacctgct
     3361 tgtcccagat gtcgaacgcc ttgaccatgt cgaccggcag cagcggcgtc tcgatcgggt
     3421 tgttggcgat ccagtcggcg tattcgggac ggccgaactg gttgatcgca tcctggctgt
     3481 cctgcggcgc catcgacagc ggcacgtcct tcaccgccgg gccgggatag aaatagccct
     3541 ggtcgtaggt gacggcctgc gccgccgggg tcagcatgta tttcatcagg tcgagcagga
     3601 ccgcgagctt gtcgtcgctc acccccttgg ggacgatcat gtagtgggcg tcggcgaccc
     3661 agtggaagcc gtcgagcttg ccgaccttgg cctcggccgg cacggtgccc agcacacgcg
     3721 ggttgatgtc ccagccggtg gtggtgacgg tcatggcgcg ggtgccctcg cctagctcct
     3781 tcatcagtgc gccggtgccg gtggggtagt actcgatgta ctggcccagc tccttgagat
     3841 aggcccaggt cttgtcccag cccttcaccg ggtccttcgg atcgctgtcg ccgagcagat
     3901 agggcaggcc catc
//
LOCUS       DATAZA010000035         5958 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1278991, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000035 DATAZA010000000
VERSION     DATAZA010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5958
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1278991"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..271
                     /locus_tag="VHZ56_00920"
     CDS             <1..271
                     /locus_tag="VHZ56_00920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX4296560.1"
                     /translation="LVAMLEAAKESSGLIEGIASASREQASAIEEVTSAVRTLDEMTQ
                     HNAALVEETNAAIEQTEAQASELDRIVDVFTIEVEDGQRKRRRAA"
     gene            complement(380..1066)
                     /locus_tag="VHZ56_00925"
     CDS             complement(380..1066)
                     /locus_tag="VHZ56_00925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HEX4296561.1"
                     /translation="MKTIGLIGGMSWESTAHYYAVLNRETAAALGGLHSAPVIVHSLD
                     FAPIEALQRAGDWDAAGRELARIAASLEAQGAGLIGLATNTMHVCAPQIVAALRVPFL
                     HIATPTADALLADGIGRVGLLGTRFTMEKRFYIEALERRGLEVLVPDVGITNLNGIIY
                     EELVRGIVREPSRQVYVEAIARLASRGAEAVILGCTEIGMLIDDAVSPLPTYDTTELH
                     ARALVSAALG"
     gene            complement(1063..1596)
                     /locus_tag="VHZ56_00930"
     CDS             complement(1063..1596)
                     /locus_tag="VHZ56_00930"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HEX4296562.1"
                     /translation="MTRPNRDAMPYRDCVGIAVFNPDGKVLIGRRKPEEDPEDVAEHD
                     APWQMPQGGIDKGEQPLETALRELYEETSIRSVELLAEVPGWIHYDLPDAALGIALKG
                     KYRGQRQRWFAYRFTGTDSEINVTAPGGGKHRAEFDRWRWEELERLPDLIVPFKRDAY
                     LQIVAAFRDLPARLRAR"
     gene            complement(1593..2786)
                     /locus_tag="VHZ56_00935"
     CDS             complement(1593..2786)
                     /locus_tag="VHZ56_00935"
                     /inference="COORDINATES: protein motif:HMM:NF016623.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HEX4296563.1"
                     /translation="MSDDLGAPLGRRPKKAAAPAIFKLSSGGRLPLARIAFGLVAVIV
                     IGVGARIALVHDPMGGQPVAEIAVNSPRNANAIAALAGSSAPASMATITALPDAAAAA
                     ATAAGASITKVGADVPDGTPDASIPGANAQGLFPDLLEPADHGAIPRISAAGQTPFDA
                     YSRPSVTPDTAAGKPLIAIVVTGLGINDTGTDAAVQQLPDAVTLAFAPYGKSLARDVA
                     AARANGHEILLEVPLEPFDYPQSDPGPDTLLTGQAPRDNLDKLYTVMGKFGGYVGLIN
                     YMGARFTASATDFGPVMEELGTRGLGYVDDGSSNRSVAAQLATAHNVEFGHADLSLDD
                     DPARGPIQQQLTALEAKATQAGGAIGVISALPVSVQAVADWAKTAADRGFTIVPVSAL
                     MKKPG"
     gene            complement(2865..4373)
                     /locus_tag="VHZ56_00940"
     CDS             complement(2865..4373)
                     /locus_tag="VHZ56_00940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX4296564.1"
                     /translation="MRLTFPRAAFVALLLTTAAPYAYAQDQSPSSAGPASSDPASAAP
                     SSAQPASPSSEQPAAPPSSEPPASAPSSAPAVPTDQAAPPAATPAADKHPRTPQEVYQ
                     ELNFFGTVFDRIRAEYVDPPDEQSLIRAAINGMLTSLDPHSSYMDPSEFDSMQEDTSG
                     QFGGLGIEVTLEDGVIKVVSPIDESPAQKAGILADDYIVELDGKSVQGMSLDDAVAQM
                     KGKIGTSIKLTVVRDGVKDPIYFTLTRDVIAQSVVKSELDGDVGVIRLARFTEQAFPG
                     IQKAIASLYEANKGQAPKGIVLDLRNNPGGLVDQAVDVADAWLKEGAVVLTRGRTDAE
                     STRYDAKPDDLDAKLASVPLVVLINGGSASAAEIVAGALQDHKRATLIGTRSFGKGSV
                     QSIIHMGDEGGIRLTTARYYTPNNRSIQAAGIQPDITITEDVPADLKGHDEILGEAGL
                     NGQIGGGTQPVATTGSSVYVPDDKTKDTQLQYAIKLIDGTETNPAYPPKADG"
     gene            complement(4381..5775)
                     /locus_tag="VHZ56_00945"
     CDS             complement(4381..5775)
                     /locus_tag="VHZ56_00945"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEX4296565.1"
                     /translation="MTLLTAAAGTLLALAAPAALHAQSQPGDVAASPDNAASDASMES
                     AAEAPVGTGIPTWIREKPEDSQTALAELQSSLSLSQDKIDKLKGEIDAMKGDRQKQDA
                     ALIAATARVKTAETDIGNVQDQIGDLIVQELDTRGRLDGTNASISNVLAALERISENP
                     PPALIVDPTDALGSARSAMLISAILPQLRAKADEVTADLKHLSDIKASAQGEDDTLKA
                     NFDVLEEEQLRIATLIAAQKQNETTASTDLATEQQAASDMADKAASLKQLISDLGKQA
                     DAVASAASATATANAGGQAPRLDANTVQLALANPERQQPAVPFLQAKGYLDFPVSGVS
                     VVNFGGDDGFGGVSRGQSVVTRAGAPVLAPADGWVIYKGPYLNYGQIVILDAGQDYTI
                     LLAGLAATNVTSGQFVRMGQPVGTMGSRTIGRTVATSAGAQNPTLYIELRDKNAPFDP
                     SGWWASPENPTQSG"
     gene            complement(5881..>5958)
                     /locus_tag="VHZ56_00950"
     CDS             complement(5881..>5958)
                     /locus_tag="VHZ56_00950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEX4296566.1"
                     /translation="LVRVMLAEQLYRTTTILSGHPYHRE"
BASE COUNT          810 a         1883 c         2287 g          978 t
ORIGIN      
        1 gctcgtcgcc atgctcgagg cggccaagga atcgagcggc ctgatcgagg gcatcgccag
       61 tgccagccgc gagcaggcgt cggcgatcga ggaagtcacc tcggccgtgc gcacgctcga
      121 cgagatgacg cagcacaacg cggcgctggt cgaggagacc aatgccgcca tcgagcagac
      181 cgaagcgcag gcgagcgagc tcgaccgcat cgtcgacgtg ttcacgatcg aagtcgagga
      241 cggccagcgc aagcgtcgca gggcagctta aaccgccgcc aacggtgtca tccccgcgaa
      301 agcggggatc cacctcaccc cttgcaccag ccgacatatg ggtccccgct ttcgcgggga
      361 tgacacctgc gggacaggtc tatcccagcg cggcgctgac cagcgcccgg gcgtgcagct
      421 cggtggtgtc gtaggtcggc agcgggctga ccgcatcgtc gatcagcatg ccgatctcgg
      481 tgcagccgag gatcaccgct tcggcaccgc ggctggccag ccgggcgatg gcctcgacat
      541 agacttgccg cgacggctcg cggacgatgc cgcgcaccag ctcctcgtag atgatgccgt
      601 tgaggttggt gatgccgaca tcgggcacca gcacctcgag gccgcgccgc tccagtgcct
      661 cgatgtagaa ccgcttttcc atggtgaagc gggtgccgag caggccgacg cggccgatgc
      721 cgtcggccag cagcgcatcg gcggtgggcg tcgcgatatg gaggaacggc acgcgcagcg
      781 cggcgacgat ctgcggcgcg cagacatgca tggtgttggt ggcgagtccg atgaggccgg
      841 cgccctgcgc ctcgaggctc gcggcgatgc gggcgagctc gcggccggcg gcgtcccagt
      901 cgccggcgcg ctgcagcgcc tcgatcgggg cgaaatcgag cgagtggacg atcaccggcg
      961 ccgagtgcag tccgccgagc gccgcggcgg tctcgcgatt tagaaccgcg taataatgcg
     1021 ccgtcgattc ccagctcatg ccgccgatga ggccgatggt cttcaccggg cacgcagccg
     1081 ggcaggcagg tcgcggaagg cggcgacgat ctgcagatag gcgtcgcgct tgaacggcac
     1141 gatgagatcg ggcaggcgct cgagctcctc ccagcgccag cggtcgaact cggctcggtg
     1201 cttgccgccc cccggcgcgg tgacgttgat ctcgctgtcg gtgccggtga agcggtaggc
     1261 gaaccagcgc tggcgctggc cgcggtactt gcccttgagg gcgatgccga gcgccgcatc
     1321 ggggaggtcg taatggatcc agccggggac ctcggcgagc agctccaccg agcggatcga
     1381 ggtttcctcg tagagctcgc gcagcgccgt ctcgagcggc tgctcgccct tgtcgatgcc
     1441 gccctgcggc atttgccacg gcgcgtcgtg ctcggcgacg tcctcggggt cttcctcggg
     1501 cttgcggcgg ccgatcagca ccttgccgtc ggggttgaac acggcgatgc cgacacagtc
     1561 gcggtagggc atggcgtcgc ggttgggtcg ggtcatcctg gcttcttcat gagggcgctg
     1621 acggggacga tggtgaagcc gcggtcggcg gcggtcttgg cccagtcggc gacggcctgc
     1681 accgacaccg gcagcgccga gatgacgccg atggcgccgc cggcctgcgt cgccttggct
     1741 tcgagcgcgg tgagctgctg ctggatgggg ccgcgcgccg gatcgtcgtc gagcgacaga
     1801 tcggcgtggc cgaattcgac attgtgggcg gtggcgagct gggcggcgac cgagcggttg
     1861 gaagagccgt cgtcgacata gccgaggccg cgggtgccga gctcttccat caccgggccg
     1921 aaatcggtgg cggaggcggt gaagcgggcg cccatgtagt tgatgagccc gacatagccg
     1981 ccgaacttgc ccatcacggt gtagagcttg tcgaggttgt cgcgcggcgc ctggccggtg
     2041 agcagcgtgt cgggaccggg gtcgctctgc ggatagtcga agggctcgag cggcacttcg
     2101 agcaggatct cgtggccatt ggcacgagcc gcggcgacgt cgcgggccag cgacttgccg
     2161 tagggcgcaa aggcgagggt gacggcgtcg ggcagttgct gcacggcggc atcggtgccg
     2221 gtgtcgttga tgccgaggcc ggtgacgacg atggcgatca gcggcttgcc ggcggcggtg
     2281 tcgggggtga ccgacgggcg cgaataggca tcgaacgggg tctggccggc ggccgagatg
     2341 cgcgggatgg cgccgtggtc ggcgggctcg agcaggtcgg ggaacaggcc ctgcgcgttg
     2401 gcgccgggaa tgctggcatc gggggtgccg tcgggcacgt cggcgccgac cttggtgatc
     2461 gaggcaccgg cggcggtcgc ggcggcggcg gccgcatcgg ggagggcggt gatggtcgcc
     2521 atgctggccg gcgcgctcga gccggcgagc gcggcgatgg cgttggcgtt gcgcggcgag
     2581 ttgacggcga tctcggcgac cggctggccg cccatcggat cgtggaccag ggcgatgcgg
     2641 gcgcccaccc cgatgacgat caccgcgacg aggccgaagg cgatgcgggc gagcggcagc
     2701 cggccgcccg aagagagctt gaagatcgcc ggtgccgcgg ccttcttcgg ccggcggccc
     2761 agcggcgcgc ccagatcgtc gctcacctgc gccaccccgt cgcggcgggg cgaatcaggc
     2821 gccccgcctc agcggctcgg gaatagcaca tccgccgctg cggctcagcc gtccgccttg
     2881 ggcggatagg cggggttggt ctcggtgccg tcgatcagct tgatggcgta ttgcagctgg
     2941 gtgtccttgg tcttgtcgtc ggggacatag accgatgagc cggtggtcgc caccggctgg
     3001 gtgccgccgc cgatctggcc gttgagcccg gcctcgccga ggatttcgtc gtggcccttg
     3061 aggtcggccg gcacgtcctc ggtgatggtg atgtcgggct ggatgcccgc cgcctggatg
     3121 gagcggttgt tgggcgtgta gtagcgcgcg gtggtcagcc ggatgccgcc ctcgtcgccc
     3181 atgtggatga tcgactgcac gctgcccttg ccgaacgagc gggtgccgat gagggtggcg
     3241 cgcttgtggt cctgcagggc gccggcgacg atctcggcgg ccgaggccga gccgccgttg
     3301 atcagcacca ccagcggcac gctggcgagc ttggcgtcga ggtcgtcggg cttggcgtcg
     3361 tagcgggtgc tctcggcgtc ggtgcggccg cgggtgagca ccacggcgcc ctctttcagc
     3421 caggcatcgg cgacgtccac ggcctggtcg acgaggccgc cggggttgtt gcgcaggtcg
     3481 agcacgatgc ccttgggcgc ctggcccttg ttcgcctcgt agagcgaggc gatggccttc
     3541 tggatgccgg ggaaggcctg ctcggtgaag cgggcgaggc ggatgacgcc gacgtcgccg
     3601 tcgagctcgg acttgaccac gctctgggcg atgacgtcgc gggtgagggt gaagtagatc
     3661 gggtccttga ccccgtcgcg caccacggtg agcttgatcg aggtgccgat cttgcccttc
     3721 atctgcgcca cggcgtcgtc gaggctcatg ccctgcaccg acttgccgtc gagctcgacg
     3781 atgtagtcgt cggcgaggat gccggccttc tgcgccgggc tttcgtcgat gggcgagacg
     3841 accttgatga cgccgtcctc gagcgtgacc tcgatgccga ggccgccgaa ctggccggag
     3901 gtgtcctcct gcatgctgtc gaactcggag gggtccatgt agctcgaatg cgggtcgagc
     3961 gaggtcagca tgccgttgat ggcggcgcgg atcagcgact gctcgtcggg cggatcgacg
     4021 tattcggcgc ggatgcggtc gaacacggtg ccgaagaaat tgagctcctg gtacacctcc
     4081 tgcggggtgc gcgggtgctt gtccgcggca ggcgtggcgg caggcggcgc cgcctggtcg
     4141 gtcggcacgg cgggggcgct cgacggggcg ctcgccggcg gctcgctcga gggcggggcg
     4201 gccggctgct cgctcgaggg cgacgccggc tgggcgctcg agggcgctgc cgaggcgggg
     4261 tcgctgctgg cgggcccggc gctcgagggc gactggtcct gtgcgtaggc ataaggcgcg
     4321 gccgtggtca gcaaaagcgc gacgaacgcc gcgcgcggga aggtcagacg catcaggagg
     4381 ttatccactc tgggtcgggt tttcggggga agcccaccat ccgctgggat cgaagggcgc
     4441 gttcttgtct cgcagctcaa tataaagggt cgggttctgc gcgccagcgc tggtcgcgac
     4501 ggtccggcca attgtccgtg atcccatcgt gccgaccggc tggcccatgc ggacgaattg
     4561 cccggaggtg acattggtcg cggcgagtcc cgccagcagg atcgtgtagt cctgcccggc
     4621 atctaggatg acgatttggc cgtaattgag gtacgggccc ttgtagatca cccagccatc
     4681 ggccggggcg agcaccgggg cgccggcgcg ggtgaccacc gactggccgc gcgagacgcc
     4741 gccgaagccg tcgtcgccgc cgaaattgac gacgctgacg ccggacaccg ggaagtcgag
     4801 gtagcccttg gcctggagga acggcaccgc cggctgctgc cgttcgggat tggcgagcgc
     4861 cagctgcacg gtgttggcat cgagcctggg cgcctggccg ccggcattgg cggtcgccgt
     4921 ggcgctggcg gcgctcgcca ccgcgtcggc ctgcttgccg aggtcggaga tcagctgctt
     4981 gaggctggcg gccttgtcgg ccatgtcgga cgccgcctgc tgctcggtgg cgaggtcggt
     5041 cgaggcggtc gtctcgttct gcttctgcgc cgcgatcagg gtggcgatgc gcagctgctc
     5101 ttcctcgagc acgtcgaaat tggccttgag ggtatcgtcc tcgccctggg ccgaggcctt
     5161 gatgtcgctg agatgcttga ggtcggcggt gacctcgtcg gccttggccc tgagctgcgg
     5221 caggatggcc gagatgagca tggcgctgcg ggccgagccg agcgcgtcgg tggggtcgac
     5281 gatcagcgcc ggcggcgggt tctcggaaat ccgctcgagc gccgccagca cgttggagat
     5341 cgaggcgttg gtgccgtcga gccggccgcg ggtgtcgagt tcctggacga tcaggtcgcc
     5401 gatctggtcc tgcacgttgc cgatgtcggt ctcggcggtc ttgacccgcg ccgtcgccgc
     5461 gatcagcgcc gcgtcctgct tctggcggtc gcccttcatg gcgtcgatct cgcccttgag
     5521 cttgtcgatc ttgtcctggc tcagcgacag cgaggactgc agttcggcga gggcggtctg
     5581 gctgtcctcg ggcttttcgc ggatccaggt cggaatgccg gtgccgaccg gcgcctctgc
     5641 ggccgattcc atcgaggcat cggacgcggc attgtcgggc gaggcggcga cgtcgcccgg
     5701 ctgcgactgg gcgtggagcg cggccggcgc ggcgagcgcc agcagcgtgc ccgctgccgc
     5761 ggtcagcaac gtcaagcgca ccattctcgc catgccgccc caaagtccga atcagccgcc
     5821 ggaatgctag cagccgcggt cgtaagcagc ccgatctctt tggcttttgg atggccgccg
     5881 ctactcgcga tggtagggat ggccggagag gatcgtcgtc gtccggtaga gctgctcggc
     5941 cagcatgacg cgcaccag
//
LOCUS       DATAZA010000036         1930 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3483863, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000036 DATAZA010000000
VERSION     DATAZA010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3483863"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(188..883)
                     /gene="pyrF"
                     /locus_tag="VHZ56_00955"
     CDS             complement(188..883)
                     /gene="pyrF"
                     /locus_tag="VHZ56_00955"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009465281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEX4296567.1"
                     /translation="MAGTLIVALDVDSRAEAERLVAGLGEAVDFYKIGYQLVYGGDGL
                     GLGKALIAAGKRVFFDLKLLDIDNTVEKGAAAIAATGAAMLTVHAYPQCMRAAVKAAA
                     GSELTILGVSVLTSMNDADVAEAGFARDTAGLVALRAEQAKAAGVGGLVASPREAAMV
                     RAIVGPAMAVVTPGIRPAGADAGDQKRTLGPAEAVAAGASHLVVGRPITAAADPRAAA
                     AAILREMAGTRLA"
     gene            964..1467
                     /locus_tag="VHZ56_00960"
     CDS             964..1467
                     /locus_tag="VHZ56_00960"
                     /inference="COORDINATES: protein motif:HMM:NF013231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX4296568.1"
                     /translation="MPPYHLAGHVLWCHTIPMQQQALSAIVAWVRLDAALQSFNLALR
                     KDYGITGLQLAVLRILGERPSLPLAALRKALVMHPATLGQSIDELRTMGLCTVARDSR
                     DKRARQVAITDKGRELMSRAPIAGPVRLRAMDHDTQKLDRLKAAFEDAVEMFGLTDHL
                     PGKTDGR"
     gene            1528..1830
                     /locus_tag="VHZ56_00965"
     CDS             1528..1830
                     /locus_tag="VHZ56_00965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008135508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX4296569.1"
                     /translation="MSTFTAIADPVRRDILALLASGEQPAGALVDALGLPQPNVSKHL
                     KALKQAGLVRVRIDGPRRLYSLDPTPLAELDAWLAPYRAFWAGKLDALGDHLKRTD"
BASE COUNT          299 a          718 c          638 g          275 t
ORIGIN      
        1 cgcggccgat caccggcgcg ccgggccgct cgaaggccga atggacgacc agcccggcag
       61 tggcgttgac ggcgcggatg ttggcggcgc ccatgcgccc gccggcgccc gcaatggcta
      121 cacgaagatc ggtcatgcct ctcccttacc ccaaggtgtc atcgccgcga aagccgggag
      181 ccgaagatca ggccagtcgc gtaccggcca tctcccgcag gatcgccgcc gccgccgcgc
      241 gcggatcggc cgcggcagtg atcggccgac cgaccaccag atggctggca ccggcggcga
      301 ccgcctcggc cggccccagg gtgcgcttct ggtcgcccgc atccgctccg gccgggcgga
      361 tgccgggcgt caccactgcc atcgccggcc cgacgatcgc ccgcaccatc gccgcctcgc
      421 gcggcgacgc gacgagcccc ccgacgccgg cggctttcgc ctgttcggcg cggagcgcca
      481 ccaggcccgc ggtgtcgcgg gcgaacccgg cttcggcaac atcggcatcg ttcatcgagg
      541 tcagcaccga gacgccgaga atggtgagct ccgagccggc ggccgccttg acggcggcac
      601 gcatgcattg cggataggcg tggacggtga gcatcgccgc cccggtcgcg gcgatcgccg
      661 cggcgccctt ttccacggtg ttgtcgatgt cgagcagctt caggtcgaag aacacccgct
      721 tgccggcggc gatcagcgcc ttgcccagcc cgagcccgtc gccgccatac accagctggt
      781 agccgatctt gtagaaatcg acagcctcgc cgagccccgc caccagccgc tcggcttcgg
      841 cgcggctgtc gacatcgagg gcgacgatca gcgttccggc catggcatgt ctccgatttt
      901 cggccttgtg gcggattgtc cggtgcgccg caagggtgcc ggacgccgag cggagggctt
      961 cctatgccgc cataccatct tgccgggcac gtcctatggt gccataccat ccccatgcag
     1021 caacaggcgc tctctgccat cgtcgcctgg gtccggctcg acgccgcgct ccagagcttc
     1081 aacctcgccc tgcgcaagga ctacggcatc accgggctgc agctggcggt gctgcgcatc
     1141 ctcggcgagc ggccgagcct gccgctggcg gcgctgcgca aggcgctggt gatgcatccg
     1201 gcaacgctcg gccagtcgat cgacgaactg cgcaccatgg ggctgtgcac cgtcgcccgc
     1261 gacagccgcg acaagcgcgc ccggcaggtg gcgatcaccg acaagggccg cgagctgatg
     1321 agccgcgccc ccatcgccgg cccggtgcgg ctcagggcca tggaccacga cacccagaag
     1381 ctcgaccggc tgaaggcggc gttcgaggat gcggtggaga tgttcgggct gacggaccat
     1441 ctgcccggca agaccgacgg ccgctgatgg cctgaaggcg ccagatatgc attgacagga
     1501 atatgccgat ggcggcatat catctgcatg tcgaccttca ccgccatcgc cgatcccgtt
     1561 cgccgtgaca tcctggccct gctggccagc ggcgagcagc ccgccggcgc gctggtggat
     1621 gcgctcggcc tgccgcagcc caacgtctcg aagcacctca aggcgctgaa gcaggccggg
     1681 ctggtccgcg tgcggatcga cgggccgcgc cggctctaca gcctcgaccc caccccgctt
     1741 gccgagctcg acgcctggct tgccccgtat cgcgccttct gggccggcaa gctcgatgcc
     1801 ctcggcgacc atctcaaaag gacagactga acatgcagga caccatggac cttggcacct
     1861 acgcccgccg cggcgacggc aagctcgaca tccgcttcga gcggaactat ccgcggccgg
     1921 tcgaaaccgt
//
LOCUS       DATAZA010000037         6211 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1046764, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000037 DATAZA010000000
VERSION     DATAZA010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6211
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1046764"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(702..1694)
                     /locus_tag="VHZ56_00970"
     CDS             complement(702..1694)
                     /locus_tag="VHZ56_00970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003529803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEX4296570.1"
                     /translation="MLRAYIRQDDRLVASDIDAAAAEPLATTAIWYNLTNPDKAEDHF
                     VESCLGIDIPTRAEMDDIEPSARLYSEGGAEFMTITALYNSETDEPAKTPVTFVLRNN
                     QLVTVRYADPRPFRLFERLVTRPTNNPYTSGEKVMLGLIEAIIDRLAQLLETTGDDID
                     QISREVFANRTRSVTSKSRDLQEIIERIGKKGDILTLARESLVSIARLSSFHQTMESA
                     NTRVAKELRQELKVLQRDAAALSDHAAFLSAKINFLLDATLGLINLEQNQIIKIFSVA
                     AVVFLPPTLVASIYGMNFKIIPELDLPFGYPLALLLMVLSAVLPYLFFKRKGWL"
     gene            complement(1899..2408)
                     /locus_tag="VHZ56_00975"
     CDS             complement(1899..2408)
                     /locus_tag="VHZ56_00975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296571.1"
                     /translation="MRHLALAALFAAALAPLPVLADDAPTMVTLKAEQIGQIFCLSRI
                     GNDDAVIGGILTRDLQQAVAAAEKKDAAYARKHPGEKPPLGDGIPWQSAADYAPQCST
                     GLVTLSKLDAKVELKYAFPDDPSANFSDTLILKKIDQPGLGVGFWRIDNVGYGDGSDL
                     RTEMLKAFE"
     gene            2541..3254
                     /locus_tag="VHZ56_00980"
     CDS             2541..3254
                     /locus_tag="VHZ56_00980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HEX4296572.1"
                     /translation="MPLVPDLWDLALRIVLTLLAAAAIGYERGTHGKAAGLRTTLLVA
                     LAACLAMIQVNLLLTVDGKTGSSFAVMDVMRLPLGILTGVGFIGAGTIIKRGATVIGV
                     TTAASMWFVTVIGLLFGGGQIWLGVAGSLIGVAVIEGLRAAEGRLARDHQATLSVRLD
                     RRRVGGDEIAALLAQPPFTIERSTYSFAAETQTEERSFHMSWRARRDEVAIPAVVKTV
                     ADIPGVLSVRWDAGGMADG"
     gene            complement(3264..4079)
                     /locus_tag="VHZ56_00985"
     CDS             complement(3264..4079)
                     /locus_tag="VHZ56_00985"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like serine protease"
                     /protein_id="HEX4296573.1"
                     /translation="MAVLAARLRRVAGLALLAAGMALPGPALAVFGGSTVADTDPLAK
                     TMAAIIYHTADGTHLCTAVALAPRLLLTAAHCTGGERSLIRIVFGVDLHYVTADRSRA
                     VADIAVPPSTAAAKGLPAYENPDDLALVLLDRAAPAGTRFAAIADDEPGATSVRVAGY
                     GATSELRQAAGLGPQQLGFDQVLRSATEPLRPKGPDLLVADQTRGAGVCTGDSGGPAF
                     AAGGTSGVVGVLIGVASPRGNNDYCRGTAYFVALERWKGWITATAKGFGQPLP"
     gene            complement(4067..4960)
                     /locus_tag="VHZ56_00990"
     CDS             complement(4067..4960)
                     /locus_tag="VHZ56_00990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX4296574.1"
                     /translation="MLDWDKLRIFHTAAESGSFTHAAEKLNMSQSAVSRQISALEEDL
                     SLKLFIRHARGLVLTEVGEQLFRTAHRMHAELQTVETQMSESQDVPTGQLIVTTTVGI
                     GSTWLSPRLHEFLLLYPDIQIEIKLNDAELDLAMREADVAIRLHRPNQSEMIQRKLFT
                     VHNHFYLSLDYLAQYGEPSSLEDLDNHRIITFGDPVPSYLGDINYIERLGRPDSSPRR
                     SALKINAIYGMMQACRASVGIAMLPDYVTEEETTLKRVLSGVELPAYEAYFVYPPALK
                     SSKRVGVFRDFLVGKAREWQF"
     gene            complement(4963..5925)
                     /gene="trxB"
                     /locus_tag="VHZ56_00995"
     CDS             complement(4963..5925)
                     /gene="trxB"
                     /locus_tag="VHZ56_00995"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEX4296575.1"
                     /translation="MSETHHTKVLIIGAGPAGYTAAIYAARANLSPILVAGLQPGGQL
                     MITTDVENYPGFAEVIQGPWLMEQMQAQAEHYGTRIVNDLIVEVDLDRRPFTLTGDSG
                     KTYTADSVIVATGAQARWLGLPSEQKFQGFGVSACATCDGFFYREKHVLVIGGGNTAV
                     EEALFLTNFASKVTVIHRRSEFRAERILQERLFKHPKVEVRWNTELADITGTQMPPSV
                     TGAVLRDTRSGKTEALSVDGIFVAIGHTPATAIFQGKLDMKPGGYLAVKPGTTQTNIP
                     GVYAAGDVTDDVFRQAVTAAGMGCMAALEAERFLAAEDLAEAAE"
BASE COUNT         1031 a         1805 c         2314 g         1061 t
ORIGIN      
        1 atcaaaaaag gcctcgctcg aggggatgag cgaggccttc gggtcattcg cctgagcgaa
       61 tgaccattga gaacgcggcc agggaggagg aggaggccgc aatctcttgg tgcgcttatg
      121 cgggccgacg gcgagtccga caaacgcgaa agcggaagcg cagccatgca ccgccggagg
      181 gaccaggacg cggcacaaaa aaagggctcc atcagaagat ggagccctac gaaagtgggg
      241 caaacggacg agggaggagg atacgccgtt tgccgttggg cctagccgag ggaggaggtt
      301 cggctcgaac ccagtgtcgg gaactgcaga ccgagggagg aggattcggt cggcaactca
      361 gcgacaaggc aaatatgctg gcaggcagcg gtttcagcaa tgcgggacct gacatgtcag
      421 ccatgcgcag tatgcaagga aggtcagtct atttgaccaa tcttttgctc agcgacgcct
      481 gcggggtgcc agaaaagatt aggccctgct cgaggggaga gcagggccaa agttttgaag
      541 gaggcaagcc tcccgcaagg agtgacggcg gacgaggagg gagaagtgtc cgcggcgtcc
      601 cgaccggtat aggtcggcag tgttgaccta ctcaaccgga ggcgctgcat ggctggcatg
      661 cggaaagcgc atatcgatta gaatgctaat gattacggcc cttacagcca gcccttgcgc
      721 ttgaagaaga ggtaggggag caccgccgac aggaccatca gcaggagcgc cagcggatag
      781 ccgaagggca ggtcgagctc ggggatgatc ttgaagttca tgccgtagat cgaggcgacc
      841 agcgttggcg gcaggaagac cacggcggcg accgagaaga tcttgatgat ctggttctgc
      901 tcgagattga tgaggcccag cgtcgcgtcg aggaggaagt tgatcttggc gctgaggaag
      961 gcggcgtggt ccgacagcgc cgcggcgtcg cgctgcagca ccttgagctc ctggcggagt
     1021 tccttggcga cgcgcgtgtt ggccgattcc atggtctggt ggaaactcga caggcgggcg
     1081 atggagacga ggctttcgcg cgccagggtg aggatgtcgc ccttcttgcc gatgcgctcg
     1141 atgatctcct gcaggtcgcg ggatttgctg gtgacgctgc gcgtccggtt ggcgaagacc
     1201 tcgcgcgaaa tctggtcgat gtcgtcgccg gtggtctcga gcagctgggc cagccggtcg
     1261 atgatcgctt cgatcaggcc gagcatcacc ttctcgccgc tggtgtaggg gttgttggtg
     1321 ggccgggtga ccagccgctc gaacagccgg aacggccttg ggtcggcgta gcgaaccgtc
     1381 accagctggt tgttgcgcag cacgaaggtg acgggggtct tggccggctc gtcggtttcg
     1441 gaattgtaga gcgcggtgat ggtcatgaac tcggcgccgc cctcgctgta gagccgggca
     1501 ctgggctcga tgtcgtccat ttcggcgcgg gtcgggatgt cgatgccgag gcacgattcg
     1561 acgaaatggt cctcggcctt gtcgggattg gtgaggttgt accagatggc ggtggtggcc
     1621 agcggctcgg cggcggcggc atcgatatcg ctggcgacga gacggtcgtc ctgacggatg
     1681 tatgcacgca gcatctgaag gctccattcg cactggccga ggggcgaggg cgagagcctc
     1741 cggcgaggat caggccgctg tccggatcaa ggatcgactt cgacggtcgg ggtccatcgg
     1801 ctgtcctttg cctgctgccg cccgctgggg agcggcaaaa tctcactgcg cccgcaaggc
     1861 gttcgggtca acggggaaac gaccggctgc ggcgggacct actcgaacgc cttgagcatt
     1921 tcggtgcgca gatcgctgcc atcgccgtag ccgacattgt cgatgcgcca gaagccgacg
     1981 ccgaggccgg gctggtcgat tttcttgagg atcagcgtgt cggagaagtt cgccgacgga
     2041 tcgtcgggga aggcgtattt gagctcgacc ttggcgtcga gcttggagag cgtcaccagc
     2101 ccggtgctgc attgcggggc gtaatcggcc gccgactgcc aggggatgcc gtcgccgagc
     2161 ggcggcttct cgcccggatg cttgcgggca taggccgcgt ccttcttttc agccgcggca
     2221 acggcctgct gcaggtcacg ggtgaggata cccccgatca ccgcgtcgtc gttgccgatg
     2281 cgggacaggc agaaaatctg gccgatctgc tcggccttga gcgtcaccat cgtcggcgcg
     2341 tcgtcggcga ggaccggcag cggcgcgagg gcggccgcga acagggcggc tagggcgaga
     2401 tggcgcatgg aagctcccga acggaatgtg cgggttgata gcagattcca ctgaaccgca
     2461 cctgaattct ggcccgccgg gcacgtgaga ccatccgccg gggtggcgcg ttgggcagct
     2521 gtgaacaagc gaggccgctc atgccgctgg tgccggacct ctgggatctt gcgctgagga
     2581 tcgtgctgac gctgctcgcc gcggcggcga tcggctacga gcgcgggacg cacggcaagg
     2641 cggcggggct gcggacgaca ctgctggtgg cgctggcggc gtgcctggcg atgatccagg
     2701 tcaatctgct gctgacggtg gacggcaaga ccggcagctc gtttgccgtg atggatgtga
     2761 tgcgcctgcc gctcggcatc ctcaccgggg tcggtttcat cggcgcgggc accatcatca
     2821 agcgcggcgc gacggtgatc ggcgtgacga cggccgcctc gatgtggttc gtaacggtca
     2881 tcggcctgct gttcggtggt ggccagatct ggctcggcgt cgccggttcg ctgatcggcg
     2941 tcgcggtcat cgaagggctt cgcgcggcag aggggcgact ggcgcgcgac catcaggcga
     3001 ccctcagcgt gcgcctcgac cggcgacgcg tcggcggcga cgagatcgcg gcgctcctcg
     3061 cgcaaccgcc tttcacgatc gaacgcagca cctacagctt cgcggccgag acgcagacgg
     3121 aagagcggag ctttcatatg agctggcggg cgcggcggga cgaggtggcg atcccggccg
     3181 tggtcaagac ggtcgccgac ataccggggg tgctgagcgt gcgctgggat gcgggcggga
     3241 tggccgacgg ctgagccgcg cggtcagggg aggggctggc cgaaaccctt cgcggttgca
     3301 gtgatccatc ccttccatcg ctcgagggcg acgaaatagg cagtgccgcg gcaatagtcg
     3361 ttgttgccgc gcgggctggc gacgccgatc agcacaccga ccactccgga cgtgccaccg
     3421 gcggcgaagg ccggtccgcc ggaatcgccg gtgcagacgc cggcgccgcg ggtctggtcg
     3481 gccaccagca ggtccggccc cttcggtcgc aacggctcgg tcgcgctgcg caggacctgg
     3541 tcgaagccga gctgctgcgg accgaggccg gcggcctggc gcagctcgga ggtggcgccg
     3601 tacccggcga cccggacgct ggtggcgcct ggctcatcat cggcgatggc ggcaaagcgg
     3661 gtgccggcgg gcgctgcacg gtcgagcagc acgagcgcca aatcgtcggg gttctcgtag
     3721 gccggcaggc ccttcgccgc ggcggtcgac ggcggcacgg caatatcggc aacggcacga
     3781 cttcggtcag ccgtgacgta gtggaggtcg acgccgaaga cgatgcggat gaggctgcgt
     3841 tcgccccccg tgcaatgggc ggccgtgagc agcaggcgtg gcgccagcgc cacggcggtg
     3901 cagagatgcg tgccgtcggc ggtgtggtag atgatggcag ccatggtctt ggccaggggg
     3961 tcggtgtcgg cgacggtgct gcccccgaat accgccagcg ccgggccggg cagcgccatg
     4021 ccagctgcca gcagcgcaag tcccgcgacg cggcgaaggc gcgccgctag aactgccact
     4081 cgcgcgcctt gccgacgagg aaatcgcgga acacgccgac acgcttggag ctcttgagcg
     4141 ccggcggata gacgaaatag gcctcgtagg ccggcaattc gacgccggag agcacgcgct
     4201 tcagcgtcgt ttcctcctcg gtgacgtagt cgggcagcat ggcaatgccg acgctggcgc
     4261 ggcaggcctg catcatgccg tagatggcgt tgatcttgag tgccgaccgg cgcgggctcg
     4321 aatccgggcg gccgagccgc tcgatgtagt tgatgtcccc gaggtaggac ggcaccgggt
     4381 cgccgaaggt gatgatgcgg tggttgtcga gatcctcgag cgaggagggc tcgccgtact
     4441 gggcgaggta atcgagcgac aggtagaagt ggttgtggac cgtgaacagc ttgcgctgga
     4501 tcatttccga ctggttgggc cggtgcaggc gaatggccac gtcggcctcg cgcatggcga
     4561 ggtcgagctc ggcgtcgttg agctttatct cgatctggat gtccggatag agcagcagga
     4621 attcgtgcag gcgcgggctg agccaggtcg agccgatgcc gacggtggtg gtgacgatca
     4681 gctggccggt ggggacgtcc tggctctcgg acatctgggt ttcgaccgtc tgcagctcgg
     4741 cgtgcatgcg gtgggcggtg cggaacagct gttcgccgac ttcggtcagg accagcccgc
     4801 gggcatggcg gatgaacagc ttgaggctca gatcctcctc gagtgccgaa atctgccggc
     4861 tcaccgccga ctgcgacatg ttcagcttct cggcggcatg cgtgaagctg cccgactccg
     4921 cggccgtgtg gaaaatccgc agtttgtccc agtcgagcat cttcactccg ccgcttcggc
     4981 gagatcttcg gcggcgagga accgttcagc ttcgagcgct gccatgcatc ccatgccggc
     5041 ggcggtgacg gcctgccgga agacgtcgtc ggtcacgtcg ccggcggcat agacgccggg
     5101 aatgttggtc tgcgtggttc ccggcttcac ggcgagatag ccgcccggct tcatgtcgag
     5161 cttgccctgg aagatggcgg tcgccggggt gtggccgatg gcgacgaaga tgccgtcgac
     5221 ggagagggct tcggtcttgc cgctgcgggt gtcgcggagc acggcgccgg tgaccgaggg
     5281 cggcatctgg gtgccggtga tgtcggcgag ctcggtgttc cagcgcactt cgaccttggg
     5341 gtgcttgaac agccgctcct gcaggatgcg ctcggcacgg aattccgagc ggcggtggat
     5401 gacggtgacc ttgctggcga aattggtgag gaacagcgct tcctcgaccg cggtattgcc
     5461 gccgccgatc accagcacat gtttctcgcg gtagaagaag ccgtcgcagg tggcgcaggc
     5521 ggagacgcca aaaccctgga atttctgctc ggacggcagg cccagccagc gggcctgggc
     5581 gccggtcgcg acgatcacgg aatcggcggt gtaggtcttg ccgctgtcgc cggtgagggt
     5641 gaaggggcga cggtcgaggt cgacctcgac gatcaggtcg ttgacgatcc gggtgccgta
     5701 atgctcggcc tgggcctgca tctgctccat cagccaggga ccctggatga cttcggcgaa
     5761 accggggtag ttctcgacat cggtggtgat catgagctgc ccgcccggct gcaaacccgc
     5821 caccagaatg ggggacaggt tggcacgcgc ggcgtagatg gcggcggtgt agccggcggg
     5881 tccggcgccg atgatcagga ccttggtgtg atgcgtctcg ctcatgcctg aacatatcgg
     5941 tgcgcgggcg tttagagcaa ggacggtagg ccgggccctg ctctgcccgg ctgatgcgca
     6001 gcgaaatcag gtctgacctc ggtccgtcgg cgattctgac gtttgtcgtg ccgggccggt
     6061 aacggctgcg cgatctgctg gaccccgcga tctggacatt gggcgatctg gacattgggc
     6121 gatcgggcga tgtgaaccga gcggcaaggg tccgaggggg gacgccgtgc gcggcgatcc
     6181 cgcttcgcag cgaggtgtgt ctcggcgccc t
//
LOCUS       DATAZA010000038         1681 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2439220, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000038 DATAZA010000000
VERSION     DATAZA010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2439220"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..753)
                     /locus_tag="VHZ56_01000"
     CDS             complement(<1..753)
                     /locus_tag="VHZ56_01000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296576.1"
                     /translation="MTAISSLRFPTPGVEPGSERMLPPTVIMLVFAMVVIAVGGFAYI
                     SDQEQSLSALRLQTDALGAATTALERTDADAARALNGAGGGIAGFFHDLEVLKTERPT
                     TLDGLGNSGAALDKLEKDWGEAIALGADGHLDEGRALIDQRQTDMAVDGIDDQVSTAL
                     AAADLQMGQHEDRIRLGTLVVLLLQVLSGTLAIAAMFFAFRSTAREALGRSAALQSAD
                     TSREQVARLFEMADVLQSAADYGDANQVLKATA"
     gene            967..1332
                     /locus_tag="VHZ56_01005"
     CDS             967..1332
                     /locus_tag="VHZ56_01005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007802958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEX4296577.1"
                     /translation="MRYMCLVHFEPSILAGRSVAERQDVDRRSLAYNDELERQGHYIV
                     SQAIQGGDTAVLVRVRDGRLSATDGPYIETKEQMAGFVLIEARDMNEAVRLAAGIPLA
                     EIGTIEVRPIYEIPVPPPA"
     gene            1329..>1681
                     /locus_tag="VHZ56_01010"
     CDS             1329..>1681
                     /locus_tag="VHZ56_01010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018116257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor"
                     /protein_id="HEX4296578.1"
                     /translation="MIDLEAIYRAERGRVLASLIRLLGGFELAEEALADAFLAAAQQW
                     PRDGVPANPRAWLVSAGRFKAIDRLRRSGRFRGLAPELRRELEAEEDRMPEDRETIED
                     DTLRLIFTCCHPLLPT"
BASE COUNT          250 a          616 c          553 g          262 t
ORIGIN      
        1 cgcggtcgcc ttcagcacct ggttggcatc gccatagtcc gccgcgctct gcagcacgtc
       61 ggccatctcg aacagccggg ccacctgctc gcgcgaggtg tcggccgatt gcagcgccgc
      121 cgagcgcccc agcgcctcgc gcgccgtcga gcggaacgca aagaacatcg cggcgatggc
      181 gagggtgccg ctcagcacct gcagcagcag caccaccagc gtgcccagcc ggatccggtc
      241 ttcgtgctgg cccatctgca ggtcggccgc cgccagcgcc gtcgacacct ggtcgtcgat
      301 gccgtccacc gccatgtccg tctgccgctg gtcgatgagc gcgcgtccct cgtcgagatg
      361 cccgtcggca ccgagcgcga tcgcctcgcc ccagtccttt tcgagcttgt cgagcgcggc
      421 accgctgttg ccgagcccgt cgagcgtcgt cggccgttcg gtcttcagca cctcgaggtc
      481 gtggaagaat ccggcgatcc cgccgccggc gccgttgagc gcgcgggccg cgtcggcgtc
      541 ggtgcgctcc agcgccgtcg tcgccgcgcc gagcgcgtcg gtctgcagcc gcagggcgct
      601 cagcgactgc tcctggtcgc tgatataggc aaagccgccc accgcgatca ccaccatggc
      661 aaacaccagc atgatcaccg tcggcggcag catgcgctcg ctgcccggct cgacgccggg
      721 cgtggggaag cgcaatgacg atatggcggt catggacatc tcgcgccccg cgggatttgg
      781 cagtgaccgc ccaaactgcc tcaaggtgtt tcccggatgg cttccgccgc acccgcaatt
      841 tcaagcaaat gccgcccttc ggcatccgtc tggcgatacg gacgctgctg cgggaatatt
      901 gcgccggact gtcgaaaccg cgcctgccgc ctcgactgga tgcaccaggc tgaaggagac
      961 tgacccatgc gctacatgtg cctcgtgcat ttcgaaccct cgatcctcgc cggcaggagc
     1021 gttgccgaac ggcaggacgt cgaccgccgc tcgctcgcct acaacgatga actcgagcgg
     1081 cagggccatt acattgtctc gcaggcgatc cagggtggcg acaccgccgt gctcgtgcgc
     1141 gtccgcgatg gccgcctgtc ggccaccgat ggcccctaca tcgagaccaa ggagcagatg
     1201 gcgggcttcg tgctgatcga ggcgcgcgac atgaacgagg ccgtgcggct cgccgcgggc
     1261 atcccgctcg ccgaaatcgg caccatcgag gtgcgcccga tctacgaaat cccggtcccg
     1321 ccgccggcat gatcgatctc gaggccatct atcgcgccga gcggggccgg gtgctggcga
     1381 gcctcattcg cctgctcggc ggcttcgagc tggccgagga ggcgctggcc gacgccttcc
     1441 tcgccgcggc gcagcaatgg ccgcgcgacg gggtgccggc caatccgcgc gcttggctgg
     1501 tgtccgccgg acgtttcaag gccatcgacc gcctgcgccg cagcggccgc ttccgcgggc
     1561 tggccccgga actgcggcgc gagctcgagg ccgaggagga ccgcatgccc gaggatcgcg
     1621 agaccatcga ggacgatacc ctgcggctga tcttcacctg ctgccatccg ctgctgccga
     1681 c
//
LOCUS       DATAZA010000039         3087 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1163096, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000039 DATAZA010000000
VERSION     DATAZA010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3087
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1163096"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..231
                     /locus_tag="VHZ56_01015"
     CDS             <1..231
                     /locus_tag="VHZ56_01015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296579.1"
                     /translation="SAMHNLVFAREQTRALLLASRSYFVAIDRYVAKADDQFGYVFGD
                     PLPKLRGQDDRTQGWTIDLPLVERGLIEHFGL"
     gene            complement(262..1122)
                     /locus_tag="VHZ56_01020"
     CDS             complement(262..1122)
                     /locus_tag="VHZ56_01020"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEX4296580.1"
                     /translation="MNLPVLLNSPAAWAAVLLPIFGAIVTLGIGYFLSRWAQHGVRTW
                     LPRAGSTAVTIAPLAGQAVRYAILIVAIITALGFIGIPSASIFTVVGAAGLALALALQ
                     NTLSNVAAGIMLAWIRPIAVGEYITGDGVEGVVVEIGLFGTRLRSTSGLFVFTNNNRL
                     WNGAITNHSREPRRRIDVDVTVPDSANVNHARDALLAVARSDQRVLSDPAPIVFVSGF
                     GTDTVTLEMRVWVATPAYRSSSRDLTAAAKIATNKVLAEGKGGTAQVEEAKDPHVSQA
                     GAQTPDLQQP"
     gene            1235..1310
                     /locus_tag="VHZ56_01025"
     tRNA            1235..1310
                     /locus_tag="VHZ56_01025"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1268..1270,aa:Lys,seq:ctt)
     gene            1327..2322
                     /locus_tag="VHZ56_01030"
     CDS             1327..2322
                     /locus_tag="VHZ56_01030"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296581.1"
                     /translation="MTRRTIPEASLLAARASRDRMLERARRRGRVRLYRVHTAMILPL
                     VGLLGLVPIDAASALGGWLGRWIIRRVAPARYLYKNVRVAFPALSDGEIDAMLAEMND
                     NIGRCLAEGVHLGAFAGRDNSRLRLVGLEHLAAAQAGGRGVLFVSGHFGNWELYEVAL
                     ANLGLDGAKVLQHPSNPFILEWVAKRRYAFGLGEQIASGEGVFVRVRAALKAGRVVQM
                     LADQRTVKGAKVEFFGVETTTNMVPARVAREAGAAIVLMSMRRLQGAHFEITFHPPRF
                     VTMADDERAIMRWVNAFFEDQLRQRPAHWLWGHGRWDDVFLKLPAAPLVTAPDAG"
     gene            2402..>3087
                     /locus_tag="VHZ56_01035"
     CDS             2402..>3087
                     /locus_tag="VHZ56_01035"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX4296582.1"
                     /translation="MTTASPFRLDGLTALVSGAGGGIGRAIVAAFGAAGARVTGADRT
                     VEMLDGLSLAGELLFDLADTAATRSAVAHYLRTGVPDIVVANAGFTRAETLDDLDQAS
                     WEREVALNLNGTYAMTAPIVEAMAARGSGRRTGCGGTGGGTTCSSSCPRRHWSPRRMQ
                     DEERRVRHRACTGVLRDDSLQRQNTRKTMTTASPFRLDGLTALVSGAGGGIGRAIVAA
                     FGAAGARVTGA"
BASE COUNT          459 a          951 c         1207 g          470 t
ORIGIN      
        1 tcggcgatgc acaatctggt gttcgcgcgg gaacagacgc gggcgctgct gctggcgtcc
       61 cgcagctact tcgtcgccat cgaccgctat gttgcgaagg ccgacgatca gttcggctac
      121 gtgttcggcg atccgctgcc caagctccgc gggcaggacg atcgcacgca gggctggacc
      181 atcgatttgc cgctggtgga gcgcgggctc atcgagcact tcgggttgtg agcggttgaa
      241 gcgcgagccg ggagcccgat ctcagggttg ctgcaggtcg ggcgtctgcg cgccggcttg
      301 cgagacgtgc ggatccttcg cttcttcgac ctgggcggtg ccgcccttgc cctcggcgag
      361 aaccttgttg gtggcgatct tggccgcggc ggtcaggtcg cgggaggacg agcgataggc
      421 gggcgtcgcc acccagacgc gcatttcgag cgtgacagta tcggtgccga acccggagac
      481 gaagacgatg ggggcggggt cggagagcac gcgctgatcg ctgcgtgcga ccgccagcag
      541 ggcgtcgcgg gcgtgattga cattggcgct gtcgggcacc gtcacgtcga cgtcgatgcg
      601 gcggcgcggc tcgcggctgt gattggtgat ggcgccgttc cagagcctgt tgttgttggt
      661 gaagacgaac agcccgctgg tcgagcgcag ccgggtgccg aagaggccga tctcgacgac
      721 gacgccctcg acgccgtcgc cggtgatgta ctcgccgacg gcgatcggcc ggatccatgc
      781 gagcatgatc cctgccgcga cgttggagag ggtgttctgc agcgccaggg cgagggccag
      841 cccggcggcg ccgacgacgg tgaagatcga ggccgaggga atgccgatga agcccagcgc
      901 ggtgatgatg gcgacgatca ggatggcgta gcgcacggcc tggccggcca gcggcgcgat
      961 ggtcacggcg gtgctgccgg cgcggggcag ccaggtgcgg acgccgtgct gggcccagcg
     1021 cgacaggaag tagccgatgc ccaaggtcac gatggccccg aagatgggca gcagcaccgc
     1081 cgcccaggca gcgggcgaat tcagcaggac gggcagattc atccggtttc tccgggattt
     1141 gagcgtggcg gattgtatca aagccgcgcc ggccggaaag tgccaagcgc tgctggacag
     1201 gtgcgggtgc ctctggtagt caccgcgccg gattgggcgg ctagctcagc tggtagagca
     1261 ggcgactctt aatcgccggg tccggggttc gagtccccgg ccgcccacca atctctcggc
     1321 gaaacgatga ccagacggac tattccggag gcgagcctcc tggcggcgcg cgcgtcgcgg
     1381 gaccgcatgc tggagcgggc gcgccggcgt gggcgcgtcc ggctgtaccg cgtgcacacg
     1441 gcgatgatcc tgccgctggt gggactgctg gggctcgtgc cgatcgacgc ggcatcggcg
     1501 ctcggtggct ggctcggacg ctggatcatc cgccgcgtcg cgccggcgcg gtacctctac
     1561 aagaacgtgc gtgtggcctt cccggcgctg agcgacgggg agatcgacgc gatgctcgcc
     1621 gagatgaacg acaatatcgg gcgctgcctc gccgagggcg tgcatctggg agcgtttgcg
     1681 ggacgcgaca attcgcggct gcggctcgtc ggtctcgagc acctcgcggc ggcgcaggcc
     1741 ggcggccgcg gcgtactgtt cgtcagcggg catttcggca attgggaact ctatgaggtg
     1801 gcgctcgcca atctggggct cgacggggcc aaggtgctgc agcatccgag caacccgttc
     1861 attctcgaat gggtggccaa gcgccgctat gcctttggcc tcggcgagca gatcgccagc
     1921 ggcgagggcg tcttcgtccg ggtgcgggca gcgctgaagg cgggccgggt ggtgcagatg
     1981 ctggccgacc agcggacagt gaagggcgcc aaggtggagt tcttcggcgt cgagacgacg
     2041 acgaacatgg tgccggcacg cgtcgcgcgc gaggccgggg cggccatcgt gctgatgtcg
     2101 atgcggcggc tgcagggggc gcactttgaa ataacgttcc atccgccgcg ctttgtcacc
     2161 atggcggacg acgagcgcgc gatcatgcgc tgggtcaatg cgttcttcga ggatcagctg
     2221 cggcagcggc cggcgcactg gctgtggggg cacgggcggt gggacgacgt gttcctcaag
     2281 ctgcccgcgg cgccactcgt caccgcgccg gatgcaggat gaagagcggt gggcgcggca
     2341 tcgcgcctgt acgggagtgc tgcggggcga tagcctccag cgccaggaca cgaggaagac
     2401 gatgacgaca gcttcgccct ttcggctgga cggcctgacg gcgctggtga gcggagccgg
     2461 gggcggcatc gggcgcgcga tcgtcgcggc attcggcgcg gcgggggcgc gcgtcaccgg
     2521 cgccgaccgc acggtggaga tgctggacgg gctgagcctt gccggcgagc tgctgttcga
     2581 cctggcggac acggcggcga cccgatcggc agttgcccac tacctgcgga cgggggtgcc
     2641 cgacatcgtg gtcgcgaacg ccgggttcac ccgggccgag acgctcgacg acctcgacca
     2701 ggccagctgg gagcgcgagg tggcgctcaa tctcaacggc acctacgcga tgaccgcgcc
     2761 gatcgtcgag gcgatggcgg cgcgcggcag cggccggcgc actggctgtg ggggcacggg
     2821 cggtgggacg acgtgttcct caagctgccc gcggcgccac tggtcaccgc gccggatgca
     2881 ggatgaggag cggcgggtgc ggcatcgcgc ctgtacggga gtgctgcggg acgatagcct
     2941 ccagcgccag aacacgagga agacgatgac gacagcttcg ccctttcggc tggacggcct
     3001 gacggcgctg gtgagcggag ccgggggcgg catcgggcgc gcgatcgtcg cggcattcgg
     3061 cgcggcgggg gcgcgcgtca ccggcgc
//
LOCUS       DATAZA010000040         5470 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_814920, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000040 DATAZA010000000
VERSION     DATAZA010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5470
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_814920"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            65..1282
                     /locus_tag="VHZ56_01040"
     CDS             65..1282
                     /locus_tag="VHZ56_01040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase family protein"
                     /protein_id="HEX4296583.1"
                     /translation="MARLSSAQCREILFDWPLWARPAQLPPPGDWVTWLLLGGRGAGK
                     TRAGAEWVRGLAAQGIGPIALVGETITEAIAVMVEGPSGILAVTPPEARPKLSGASLH
                     WPNGVDAAILGAADPERFRGPQFAAAWCDEIGKWPNAEAAWDMLQFGLRLGAQPRQIA
                     TTTPRPTTLLKRLLGDPLTAVTRMTTDENRRHLAGSFLSAVVARYRGTALGRQELDGE
                     LIDDLPGALWTRQMFRPLGDEAIGRIVVAVDPPATSTARSDGCGIVIAGRTSEGVAVL
                     GDLTLKPAAPLQWAKAAVAAFHGRNADCIVAEINQGGEMVKAVIAQVDDTVPVRTVHA
                     TRGKWLRAEPVAALYAQGKVRHAAGLSALEDEMCSFGPDGFADGHSPDRVDALVWAVT
                     ELMLREEPRVRGL"
     gene            complement(1279..1698)
                     /locus_tag="VHZ56_01045"
     CDS             complement(1279..1698)
                     /locus_tag="VHZ56_01045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007606984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEX4296584.1"
                     /translation="MIKYLIDTNVLSELRRATPANARLHEWAASVDPLDSAVSVISLM
                     ELEYGAKSVRSKDPAFAARLTNWIASTIRPTYEGRLLAVDEIVASRCATLIASRSQHL
                     SDALIAATALAHRLTVITRNVRHFEPMGVPILNPWTA"
     gene            complement(1695..2006)
                     /locus_tag="VHZ56_01050"
     CDS             complement(1695..2006)
                     /locus_tag="VHZ56_01050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006338542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HEX4296585.1"
                     /translation="MNAHSKPGTATTLTSREFNQHTSRAKAAADKGPVVITDRGEPAY
                     VLMTHTEYERLTSKPASRVSLAEALADPNYSPDEPDLMDFIPPRRAERIRFRFTPDDD
                     K"
     gene            2076..3233
                     /locus_tag="VHZ56_01055"
     CDS             2076..3233
                     /locus_tag="VHZ56_01055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HEX4296586.1"
                     /translation="MPNLITRLLGGRIAVAESKAARMFVSWADLGLPDWTRRNFPALA
                     QEGFIRNPVVHRCVRLIAEAATRVPFAVLEDGRRLSEHPLLTLLRRPNAHQAGGELFE
                     AVYAYLQTAGNAYLTAALGEDAVTGIYLCRPDRMVLVPGSDGWPAAYAYTVGERTQTL
                     RQDTQPVASVLHLKLFHPLDDHYGLAPLDAAQQSLDLHNAAAKWNKALLDNSARPSGA
                     LVYTAGSGALTEAQFTRLKEELEGAFQGAANAGRPMVLEGGLDWKSIGISPKDMDFIE
                     AKHAAAREIALAFGVPPMLLGIPGDNTYSNLAEANRSFWRQTVIPLVRRVADDLSFWL
                     APAFGGRVTLTPDLDGVEALGEDRAQMWTRIGGATFLTDAEKRQMLGIGDG"
     gene            3226..3414
                     /locus_tag="VHZ56_01060"
     CDS             3226..3414
                     /locus_tag="VHZ56_01060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018701262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296587.1"
                     /translation="MDEITRTVIARGDLAHLALFLWASGASALLAWALRELARANRRF
                     EDFVKEIAALNALFKRKD"
     gene            3536..4033
                     /locus_tag="VHZ56_01065"
     CDS             3536..4033
                     /locus_tag="VHZ56_01065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA];
                     GO_process: GO:0019082 - viral protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HEX4296588.1"
                     /translation="MEPMVIDDEGRFSGYASVFGKPDEGGDIVMPGAFRRSLGLRGRS
                     RIKMLFQHDPKEPVGVWERIAEDDFGLFVEGRLVPEVPRAEALRRLIARRAVDGLSIG
                     FRTVKATREPGTGHRQLWEIDLWEVSIVTFPMMDLARISPGKPPVRNARLERSLSAAM
                     SVFRS"
     gene            4043..5269
                     /locus_tag="VHZ56_01070"
     CDS             4043..5269
                     /locus_tag="VHZ56_01070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HEX4296589.1"
                     /translation="MTETQSGLENKAGAVAPAGVEAMFSEFMGAFEEFKRTNDGRLSE
                     LERRGSADAVTEDKLGRLNQALDNAKSVIDRANLERARPRLEGGRPDAGGEYKDAFAA
                     YVKRGEEKALSIGSGPDGGYLVPTETDTEITRLMTALSPIRSLASVRQVSTATYKKPV
                     SITGPATGWVAETTSRTQTDTQTIDALSFPVAELYAQPAATAAFLDDAAVDVGQWIAD
                     EVNAAFAEQEGTAFVTGDGTNKPKGFLSATTVADASWTWGRLGYLVTGVSGDLAASNK
                     SDILVDLVYALKAGYRQNASWVMNRKTQAVLRKLKDDAGNYIWQPAAFADGKATLMGF
                     PLVEAEDMPDIGADSLSIAFGDFKRGYLVVDRTGVNVLRDPYTAKPYVLFYVTKRVGG
                     GVQNFEAIKLLKFGTA"
BASE COUNT          896 a         1809 c         1951 g          814 t
ORIGIN      
        1 gatatccgcc gccagctggt cgagcgcatt gtcgaactca agcgcggctg aggaagccgc
       61 ctggatcgcc cgcctcagca gcgcgcaatg tcgcgagatc ctcttcgact ggccgctgtg
      121 ggcccggccg gcgcaactgc cgcctccggg cgactgggtc acctggctgc tgctcggcgg
      181 ccgcggcgcc ggcaagaccc gtgccggcgc cgaatgggtg aggggactcg cggcgcaggg
      241 catcgggccg atcgcactgg tcggcgaaac catcaccgag gcaatcgccg tgatggtcga
      301 ggggccgagc gggatattgg ccgtgacgcc gccggaggcg cggccaaaat tgtctggagc
      361 atcgctccac tggcccaacg gggtcgacgc ggcgatcctc ggggcagccg atccggaacg
      421 ctttcgcggg ccgcaattcg ctgccgcctg gtgcgacgag atcggcaaat ggccgaacgc
      481 cgaggcggcc tgggacatgc tgcagttcgg cctgcggctg ggcgcgcagc cgcggcagat
      541 cgcgacgacg acgccgcgac cgacgacatt gctgaagcgg ctcctcggcg atccgctgac
      601 cgcggtgacg cgcatgacca ccgacgagaa ccgccggcac ctcgccggca gcttcctctc
      661 ggcggtggtg gcgcgctacc gcggcacggc gctcggccgg caggagctcg acggcgaatt
      721 gatcgacgac ctgccgggag cgctctggac gcgccagatg ttccggccgc tcggcgacga
      781 ggccatcggc cgcattgtcg tggcggtcga tccgccggcg acgagcacgg cgcggtcgga
      841 cggctgcggc atcgtgattg ccgggcggac cagcgagggc gtggcggtgc tcggcgacct
      901 gacgctgaag ccggccgcgc cgctgcaatg ggcgaaggcg gcagtggcgg ccttccacgg
      961 gcggaatgcc gactgcatcg tcgccgagat caaccagggc ggcgagatgg tcaaggccgt
     1021 gatcgcccag gtggacgaca cggtgccggt gcgcaccgtg cacgcgacgc gcggcaaatg
     1081 gctgcgcgct gaaccggttg cggcattgta cgcgcagggc aaggtgcggc acgcggcggg
     1141 cctgtcggcg ctggaagacg agatgtgcag cttcggcccg gacggctttg cggacggcca
     1201 ttcgcccgac cgcgtcgatg cgctggtgtg ggcggtgacg gaattgatgc tgcgggagga
     1261 accaagggtg cgggggcttt aggcggtcca gggattgagg atcggcacgc ccattggctc
     1321 aaaatgccga acattgcggg taatgaccgt caaccgatga gccagggcgg tggctgcgat
     1381 cagtgcgtcc gagagatgct gcgacctcga ggcgatcagc gttgcgcaac gcgacgcgac
     1441 gatctcgtcg accgcaagaa gccggccttc ataggtcggc cgaattgtgg atgcgatcca
     1501 atttgtaagc cgagcggcaa aagccggatc cttgctgcgc accgacttgg ccccgtactc
     1561 cagctccatc aggctgatga cggatacggc agagtcgaga ggatcgacgc tcgccgccca
     1621 ttcgtggagc cgggcgttgg ctggcgtcgc ccgcctgagc tccgaaagga cgttcgtgtc
     1681 gatgaggtac ttgatcactt gtcgtcgtcg ggagtgaagc gaaagcggat tcgctctgca
     1741 cgacgcggtg ggatgaagtc catcagatct ggttcgtcag ggctgtaatt tgggtcggcg
     1801 agcgcttcgg cgaggctgac gcgagacgcc ggctttgacg tgaggcgctc gtattccgtg
     1861 tgcgtcatca gcacataggc cggctcgccg cgatcggtga tgacgaccgg acccttatcg
     1921 gccgcagcct tggcgcggct cgtgtgctgg ttgaattcac ggctggtcag tgtcgtggcc
     1981 gtgccgggct tcgaatgcgc gttcatcggt ggcttccgta gaatgtagca acgttactac
     2041 atcggcggtg cggccgtcaa acccagggaa tttggatgcc caatctcatc acccgcctgc
     2101 tcggcggacg gatcgctgtt gccgaaagca aggcagcgcg gatgtttgtg tcgtgggccg
     2161 atcttggcct gcccgactgg acgcggcgga attttccggc gctggcgcag gaggggttca
     2221 tccgcaatcc ggtggtgcac cgctgcgtgc ggctgatcgc cgaggcggcg acgcgggtgc
     2281 cgttcgcggt gctcgaggac ggccggcggc tgagcgagca tccgctgctg acgctgctgc
     2341 gccggcccaa cgcgcaccag gcgggcggcg agctgttcga ggcggtgtac gcgtacctgc
     2401 agaccgccgg caacgcctac ctgacggcgg cgctgggcga ggacgcggtg accggcatct
     2461 atctctgccg gcccgaccgc atggtgctgg tgcccggcag cgacggctgg ccggcggcct
     2521 atgcctacac cgtcggcgag cggacgcaga cgctgcggca ggatacccag ccggtggcga
     2581 gcgtgctgca cctgaaactg ttccatccgc tcgacgacca ctacgggctg gcgccgctcg
     2641 atgcggcgca gcagagcctc gacctccaca acgccgcggc caagtggaac aaggcgctgc
     2701 tcgacaattc ggcgcggccg tcgggcgcgc tggtctatac ggccggcagc ggggcgctga
     2761 ccgaggcgca gttcacgcgg ctgaaggaag agctggaggg ggcgttccag ggcgccgcca
     2821 acgccggccg gccgatggtg ctggagggcg ggctcgactg gaagtcgatc ggcatcagcc
     2881 ccaaggacat ggacttcatc gaggccaagc atgcggcggc gcgcgaaatc gcgctggcct
     2941 tcggcgtgcc gccgatgctg ctggggatcc ccggcgacaa cacctactcc aatctcgccg
     3001 aagccaaccg ctcgttctgg cggcagaccg tgattccgct ggtgcggcgc gtcgccgacg
     3061 acctcagctt ctggctggcg ccggcgttcg gcggccgggt gacgctgacc ccggatctcg
     3121 atggggtcga ggcgctgggc gaggaccgcg cccagatgtg gacacgcatc ggcggcgcga
     3181 cgttcctcac cgacgccgag aagcgtcaga tgctggggat cggcgatgga tgagatcacc
     3241 cgcaccgtca tcgcccgcgg cgacctcgcg cacctggcgc tgttcctgtg ggcgagcggc
     3301 gccagcgcgc tgctggcctg ggcgctgcgc gaactcgccc gcgccaaccg gcgcttcgag
     3361 gatttcgtca aggaaatcgc cgcgctgaac gcgctgttca aacgcaagga ctgaccatgc
     3421 ccgagaccaa gaccgacccc gcccaggtgt tccggcagtt cgcctggcac ctggcgggaa
     3481 cgctcgccgg gcggccgaag cggccgcgtc cggccaagcc cgcggggcgg cgctgatgga
     3541 gccgatggtc atcgacgacg aggggcgctt ctcgggctac gccagcgtct tcggcaagcc
     3601 cgacgagggc ggcgacatcg tcatgccggg ggcgttccgc aggagcctcg ggctgcgcgg
     3661 ccgcagccgc atcaaaatgc tgttccagca cgacccgaag gagccggtgg gcgtctggga
     3721 gcgcatcgcc gaggacgatt tcggcctctt cgtcgagggc cggctggtgc cggaggtgcc
     3781 gcgggccgaa gcgctgcggc ggctgatcgc ccggcgcgcc gtcgacggcc tgtcgatcgg
     3841 ctttcgcacc gtcaaggcga cgcgcgagcc gggcaccggc catcgccagc tgtgggagat
     3901 cgatttgtgg gaggtctcca tcgtcacctt cccgatgatg gatctggccc ggatttcccc
     3961 gggcaagccg ccggtgcgca acgcccggct cgaacggtcg ctcagcgcgg ccatgtcagt
     4021 gttcagaagc taaggaatga caatgaccga aacccagagc ggcctcgaaa acaaggccgg
     4081 agccgtcgcg cccgccggcg tcgaggcaat gttcagcgaa ttcatgggcg ccttcgagga
     4141 gttcaagcgc accaatgacg ggcgcttgtc cgagctcgag cgccgcggct ccgccgatgc
     4201 ggtgaccgaa gacaagctcg gccgcctgaa ccaggcgctc gacaacgcca aatcggtgat
     4261 cgaccgcgcc aatctcgaac gggcgcggcc gcggctcgag ggtggccggc ccgacgccgg
     4321 cggcgaatac aaggacgcct tcgccgccta tgtgaagcgc ggcgaggaga aggccctgtc
     4381 gatcggttcg ggcccggacg gcggctacct cgtgccgacc gaaaccgaca ccgagatcac
     4441 ccggctgatg acggcgctgt cgccgatccg ctcgctggcc agcgtccgcc aggtgtccac
     4501 cgcgacctac aagaagccgg tgtcgatcac cggaccggcc accggctggg tggcggagac
     4561 gacgagccgc acccagaccg acacgcagac catcgatgcg ctgagctttc ccgtcgccga
     4621 gctctacgcc cagccggcag cgaccgccgc cttcctcgac gatgccgcgg tcgacgtcgg
     4681 ccagtggatc gccgacgagg tgaacgccgc cttcgccgag caggagggca ccgccttcgt
     4741 caccggcgac ggcaccaaca agcccaaggg cttcctcagc gccaccacgg tcgccgatgc
     4801 gagctggacc tggggcaggc tcggctatct cgtcaccggc gtcagcggcg acctggctgc
     4861 cagcaacaag agcgacatcc tggtcgacct cgtctatgcg ctcaaggccg gctaccggca
     4921 gaatgccagc tgggtgatga accgcaagac ccaggcggtg ctccgcaagc tcaaggacga
     4981 tgccggtaac tatatctggc agccggcggc cttcgccgac ggcaaggcga cgctgatggg
     5041 cttcccgctg gtcgaggccg aagacatgcc cgacatcggc gcggactcgc tgagcattgc
     5101 ctttggcgac ttcaagcgcg gctatctcgt ggtggaccgc accggcgtca acgtgctgcg
     5161 cgacccctac accgccaaac cctacgtgct gttctatgtg accaagcggg tgggcggggg
     5221 cgtccagaac ttcgaggcga tcaagctctt gaaattcggc actgcgtaag cggcgccgag
     5281 ccccggcgcg ggcgcactcc ctcacgcgcg ccggggcaaa ctccctccaa cgaggacacc
     5341 gacatgacct ccaccctcat cgccggaccc ggcgaggagc cagtttcgct cgccgaagcc
     5401 aaggcctggt gccggatcga cgcgaccgac gaggacgcgc tggtttcggc gctcatcgcg
     5461 gcggcgcggc
//
LOCUS       DATAZA010000041         5818 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3599825, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000041 DATAZA010000000
VERSION     DATAZA010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5818)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5818)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5818
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3599825"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            23..829
                     /gene="lpxA"
                     /locus_tag="VHZ56_01075"
     CDS             23..829
                     /gene="lpxA"
                     /locus_tag="VHZ56_01075"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HEX4296590.1"
                     /translation="MSRNIHSTAIVEPGATLGDDVKIGPYCIVGAETALDDGVEVISH
                     AIVTGRTRVGAHSTIFPFASIGHRPQDLKYAGEPSTLEIGSHTIIREHVTINPGTAGG
                     GMVTRIGDHSLIMIGVHIGHDCIIGSNVILSNNVTFAGHCHVDDYVVMSGYSGATQFV
                     HIGAHAFVGGLTKLEKDLIPYGTAVGNPAELSGLNLVGLKRRGFDREAIHNLRTAYRM
                     IFASEGTLRERVDDAAALFAKEPLVQDVVKFIIDAKDHPLTLPRNGHSEL"
     gene            829..1656
                     /gene="lpxI"
                     /locus_tag="VHZ56_01080"
     CDS             829..1656
                     /gene="lpxI"
                     /locus_tag="VHZ56_01080"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF017989.4"
                     /note="LpxI, functionally equivalent to LpxH, replaces it
                     in LPS biosynthesis in a minority of bacteria; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase LpxI"
                     /protein_id="HEX4296591.1"
                     /translation="MARRLTLIAGSGALVPIVAAAARQRGDALQVLDVVGRRDIAGDS
                     VRQVTLADAAGLIEAVKSFRTSHMVLAGAVRLSDADREGLARAFGLAGKVARSLGDVG
                     FAGMVLVYCRVIGVKLIGAQEIAPELLAPAGLVAGPPLSAELEGFARKALQAARAVGA
                     IDLGQAVVLSGERPIAAEDAAGTDALLERVGVLRGQGLAGNGVAPLILAKALKPRQPR
                     FADLPTIGVRTLRNAAAAGIGVIAVEAGRSLVLERAELETEAAGLGVSIIGVKLRNG"
     gene            1649..2788
                     /locus_tag="VHZ56_01085"
     CDS             1649..2788
                     /locus_tag="VHZ56_01085"
                     /inference="COORDINATES: protein motif:HMM:NF014714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEX4296592.1"
                     /translation="MADPVRLFVLAGEPSGDRIGADLVKRMRIHRTVQLTGIGGDALA
                     GEGLRSFFPMSDLSVMGLVDVLARLPLLYWRLRQTVQAIMDAPPDVVVLIDSQVFSQS
                     VAERLRKAGYKGPIVLYVSPSVWAWKPERAPALAPLYDEILAVLPFEPAVMKRLGGPP
                     TVYVGHPALEHTSLRAAQPERGPLLLLPGSRTGELRRHLPLMEAIAMILQRHPRVSGF
                     VLPTPRSAEQQVVEAVGNWTVPVFVTATSEGKATAFRESVAAAAVTGTVTLELALAGV
                     PMVTTYVAEQAQWQRAKKYNIRFAALPNILYGSEIVPEILGRRREPERVVEEVTRLLD
                     DADATGQQVAGFARIRAGMETGLPGAPLTDAAARVLAHLRADTGT"
     gene            complement(2761..4056)
                     /gene="gltA"
                     /locus_tag="VHZ56_01090"
     CDS             complement(2761..4056)
                     /gene="gltA"
                     /locus_tag="VHZ56_01090"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018858813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004108 - citrate (Si)-synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HEX4296593.1"
                     /translation="MSDTVAKLTIGDKTYEFPVLSGTVGPEVIDIRSLYTKTGMFTYD
                     PGFTSTAACDSTITYIDGDKGELMYRGYPIEQLAAKSSYLEVCYLLLYGELPTAAQLK
                     DFDGRVTRHTMLHEQVHLFFRGFRRDAHPMAIVCGVVGALAAFYSDSADINDPEQREI
                     ASIRMIAKLPTIVSMAYKYSVGQPFVYPRNDMDYSSNFLRMCFSVPAEEYKVNPVVAK
                     AMDLIFTLHADHEQNASTSTVRLAGSSDANPFACIAAGVACLWGPAHGGANEAALNML
                     KEIGTPDRIPDFIARVKDKSSGMRLMGFGHRVYKNYDPRAKVLQGAANDVLEQLGAHN
                     LSPTLQVARELERIALSDPYFIDRKLYPNVDFYSGIILDAIGFPTSMFTAIFAMARTV
                     GWIAQWKEMIADPQKKIGRPRQLYQGSPERDYVPVSARK"
     gene            complement(4200..5633)
                     /gene="gltX"
                     /locus_tag="VHZ56_01095"
     CDS             complement(4200..5633)
                     /gene="gltX"
                     /locus_tag="VHZ56_01095"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019173442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEX4296594.1"
                     /translation="MPSPTADKTVVTRFAPSPTGYLHIGSARTALFSWAYARHTGGKF
                     LLRIEDTDRERSTEAAVQAIYDGLGWLGLNWDGPPTLQFSRAARHAEVASELLARGQA
                     YYCYCSPEELAQMREEARARGLPPRYNGMWRDRDPAEAPAGVAPVIRIKAPQTGEIVV
                     NDHVQGKVVFKAENLDDFIILRSDGTPTYMLAVVVDDHDMAVTHIIRGDDHLTNAARQ
                     IVIYNGMGWGIPEMAHIPLIHGPDGAKLSKRHGALGVGAYREMGYLPEAMINYLARLG
                     WSHGDDELFSVQQMVDWFALEDLNKGAARFDFVKLENVNGHYIRGAAPDHLYEVMVAT
                     AAEIHRDIDLAGLTANKSTVLAALPELQPRAKTVLELIDLAQFIYAVRPLHIDTAATE
                     QLTAEARAMLGAAVATLDGVSDWTVPAIDAAIRAFAEARGLKLGKVAQPLRAALTGRT
                     VSPGIFEVMVLIGKAESLARISDQAAD"
BASE COUNT          892 a         1807 c         2149 g          970 t
ORIGIN      
        1 gtgatggccg agaccccctg atatgtcgcg caacatccat tcgaccgcca tcgtcgagcc
       61 cggcgcgacg ctgggcgacg acgtcaagat cgggccctat tgcatcgtcg gcgcggaaac
      121 ggcgctcgac gacggcgtcg aggtgatttc gcacgccatc gtgacggggc gtacccgcgt
      181 cggcgcgcat tccaccatct tcccgttcgc ctcgatcggc caccggccgc aggacctcaa
      241 atatgcgggc gagccgtcga cgctcgagat cggctcgcac accatcatcc gcgagcatgt
      301 gaccatcaat ccgggtaccg ccgggggtgg catggtgacc cggatcggcg atcattcgct
      361 gatcatgatc ggggtccaca tcggccacga ctgcatcatc ggcagcaatg tcatcctctc
      421 caacaatgtc acgttcgcgg gtcactgcca cgtcgacgac tatgtcgtga tgagcggcta
      481 ttcgggcgcc acacagttcg tccacatcgg ggcgcatgcc ttcgtcggcg ggctgaccaa
      541 gctcgagaag gacctcattc cctacggcac ggcggtcggc aatccggccg agctctcggg
      601 gctcaacctg gtgggcctca agcgccgcgg cttcgaccgc gaggcgatcc acaatctgcg
      661 cacggcgtac cggatgatct ttgccagcga gggaacgctg cgcgagcggg tcgacgatgc
      721 ggcagcgctg tttgccaagg agccgctggt ccaggacgtg gtgaagttca tcatcgatgc
      781 caaggatcac ccgctgacgc tgccgcggaa cgggcacagc gagctgtgat ggctcgccgg
      841 ctgaccctca tcgcggggtc gggcgccctg gttccgatcg tcgcggcggc ggcgcggcag
      901 cgcggcgatg cgctgcaggt gctggacgtc gtgggccgtc gcgacatcgc cggcgacagc
      961 gtccggcagg tgacgctggc cgatgcggcg gggctgatcg aggcagtaaa atccttccgc
     1021 accagccaca tggtgctggc cggcgcggtg cggctttcgg atgccgaccg cgaaggactg
     1081 gcgcgggcgt tcggcctcgc cggcaaggtg gcgcggtcgc tcggcgatgt cggttttgcc
     1141 ggcatggtgc tggtctattg ccgggtgatc ggcgtcaagc tcatcggggc gcaggagatc
     1201 gcgccggaat tgctggcgcc ggcgggactg gtcgccgggc cgccgctttc ggccgaactc
     1261 gagggcttcg cgcgcaaggc gctgcaggcg gcccgtgcgg tgggggcgat cgatctcggg
     1321 caggccgtgg tgctgagcgg tgagcggccg atcgcggcgg aggacgcggc cggcaccgat
     1381 gcgctgctcg agcgggtcgg ggtgctgcgg ggacaggggc tggcgggcaa cggcgtggcg
     1441 ccgctgatcc tcgccaaggc gctgaagccc aggcagccgc gcttcgccga cctgccgacg
     1501 atcggcgtgc ggacgctgcg caacgcggcg gcggccggga tcggagtgat cgcggtggaa
     1561 gcgggaagaa gcctggtcct ggaacgggcg gaactggaaa ccgaggcagc cgggctcggc
     1621 gtgtcgatca tcggggtcaa gctccgcaat ggctgatccc gtccggctct tcgtgctcgc
     1681 cggcgagccg tccggcgacc gcatcggggc cgatctggtg aagcgcatgc gcattcaccg
     1741 gacggtgcag ctgaccggca tcggcggcga tgcgctggcg ggcgaggggc tgcgctcgtt
     1801 tttcccgatg tccgacctgt cggtgatggg actggtcgat gtgctcgcgc ggctgccgct
     1861 gctctactgg cggctgcgcc agacggtgca ggcgatcatg gatgcgccgc ccgatgtcgt
     1921 cgtcctgatc gactcgcagg tgttcagcca gagcgttgcc gagcggctgc gcaaggcggg
     1981 ctacaagggg ccgatcgtgc tctacgtctc gcccagcgtg tgggcgtgga agcccgagcg
     2041 ggcgccggcg ctggcgccgc tctatgatga gatcctggcg gtgctgccgt tcgagccggc
     2101 ggtgatgaag cggctgggtg gcccgccgac ggtctatgtc ggccatccgg cgctcgaaca
     2161 cacctcgctg cgcgccgcac agccggagcg cgggccgctg ctgctgctgc cgggaagccg
     2221 gacgggcgag ctgcggcggc acctgccgct gatggaagcg atcgcgatga tactgcagcg
     2281 gcatccgcgg gtcagcggct tcgtcttgcc gactccgcga tcggccgagc agcaggtggt
     2341 cgaggcggtg ggcaactgga ccgtgccggt gttcgtcacg gcgacgtcgg aaggcaaggc
     2401 cacggcgttc cgggagtccg tggcggcggc agccgttacc ggcacggtga cgctggagct
     2461 ggcgctcgcc ggggtgccga tggtcaccac ctatgtcgcc gagcaggcgc agtggcagcg
     2521 ggcgaagaaa tacaacatcc ggttcgcggc gctgcccaac atcctctacg gcagcgagat
     2581 cgtgcccgag atcctcgggc gccggcgcga gcctgagcgg gtcgtcgaag aggtcacccg
     2641 gctgctcgac gatgcggatg cgacgggcca gcaggtcgcc ggcttcgcgc gcatccgggc
     2701 cggcatggaa accggcctac ccggcgcgcc gctgaccgac gccgccgcgc gcgtgctggc
     2761 tcacttgcgg gcggacaccg gaacgtaatc gcgctcgggc gagccctggt aaagctggcg
     2821 cggccggccg atcttctttt gcggatcggc gatcatttcc ttccactggg cgatccagcc
     2881 gacggtgcgc gccatggcga agatggccgt gaacatcgag gtcgggaagc cgatcgcgtc
     2941 gaggatgatg ccggaataga aatcgacgtt cgggtagagc ttgcggtcga tgaagtaggg
     3001 atcggacagg gcgatcctct ccagctcgcg cgcgacctgc agggtgggcg agagattgtg
     3061 cgcgcccagc tgttcgagca cgtcgttggc ggcgccctgc agcaccttgg cccgtggatc
     3121 gtagttcttg tagacgcgat ggccgaagcc catcagccgc atgccgctcg acttgtcctt
     3181 cacgcgcgcg atgaaatcgg ggatgcggtc cggggtgccg atctccttga gcatgttcag
     3241 cgccgcctcg ttggcgccgc catgcgccgg accccagagg caggcaacgc cggccgcgat
     3301 gcaggcgaac ggattggcgt ccgaggagcc ggcgaggcgc accgtcgaag tcgaggcgtt
     3361 ctgctcatgg tcggcgtgga gcgtgaagat caggtccatc gccttggcga cgaccgggtt
     3421 caccttgtat tcctcggccg gaaccgagaa gcacatgcgc aggaagttgc tggagtagtc
     3481 catgtcgttg cgcgggtaca cgaagggctg gccgacggaa tatttgtagg ccatggagac
     3541 gatcgtcggc agcttggcga tcatgcggat cgaggcgatc tcgcgctgct ccggatcgtt
     3601 gatgtcggcg gagtcgctgt agaaggcggc cagcgccccg accacgccgc agacgatggc
     3661 catcgggtgg gcatcgcgac ggaagccgcg gaagaacagg tgcacctgct cgtgcagcat
     3721 ggtgtggcgg gtgacgcgcc cgtcgaagtc cttgagctgc gcggccgttg gcaactcgcc
     3781 gtagagcagc aggtagcaga cctcgaggta gctcgacttg gcggccagtt gctcgatggg
     3841 gtagccgcga tacatcagct cgcccttgtc gccatcgatg taggtgatgg tgctgtcgca
     3901 ggcggcggtc gaggtgaagc cggggtcgta ggtgaacatc ccggtcttgg tgtagagcga
     3961 ccggatgtcg atcacctcgg ggcccacggt gcccgaaagc accgggaact cataggtttt
     4021 gtcaccgatg gtcagtttgg cgacggtgtc ggacatgagc gctctccatg ggggccgcgg
     4081 gccgggggag gcacgtgcga gcggccggaa acgggtcgga tgcaggtcgg gttctgcgta
     4141 gccgatttac cctgtcactg caacagatag gtgaacatag ctgacctatt tagaggcaat
     4201 caatcggcgg cctggtcact tatccgtgcg aggctttcgg ccttgccgat cagcaccatg
     4261 acttcgaaaa tgccgggcga gacggtgcgg ccggtgaggg cggcgcgcag cggctgcgcc
     4321 accttgccga gcttgagccc gcgggcctcg gcaaacgccc ggatggctgc atcgatcgcc
     4381 gggacggtcc agtcggaaac gccgtcgagc gtcgcgacgg cggcgccgag catggcgcgg
     4441 gcctcggcgg tcagctgctc ggtggcggca gtgtcgatgt gcagtggccg gacggcgtaa
     4501 atgaactgcg cgaggtcgat gagctccagc accgtcttcg cccgcggctg cagttccggg
     4561 agagcggcca gaacagtgct cttgtttgcc gtcagcccgg cgaggtcgat atcgcgatgg
     4621 atctcggctg ccgtcgccac catcacctcg taaaggtggt ccggtgcggc gccgcggatg
     4681 tagtggccgt tgacgttctc gagcttgacg aagtcgaagc gcgcggcgcc cttgttgagg
     4741 tcctcgagcg cgaaccagtc gaccatctgc tgcaccgaaa acagctcgtc gtcgccgtgc
     4801 gaccagccga gccgcgcgag gtagttgatc atcgcctccg gcaggtagcc catctcgcga
     4861 taggcaccga cgccgagggc gccgtggcgc ttgctgagct tggcgccgtc cggaccgtgg
     4921 atcagcggga tgtgcgccat ctccggtatg ccccagccca tgccgttgta gatgacgatc
     4981 tggcgggcgg cgttggtcaa atggtcgtcg ccgcggatga tgtgggtcac cgccatgtcg
     5041 tggtcgtcga caaccacggc gagcatgtag gtcggggttc catccgagcg caggatgatg
     5101 aagtcgtcga ggttctcggc cttgaacacg accttgccct ggacgtggtc gttgacgacg
     5161 atctcgccgg tctgcggtgc cttgatgcgg atcaccgggg cgacgccggc cggcgcctcg
     5221 gcggggtcgc ggtcgcgcca catgccgttg tagcggggcg gcaggcccct ggcccgggcc
     5281 tcttcgcgca tctgcgcgag ttcctcgggg gagcagtagc aatagtaggc ctggccgcgc
     5341 gccagcagtt cgctggcgac ctcggcatgg cgggcagcac gggagaactg cagggtcggg
     5401 gggccgtccc agttgaggcc gagccagccg agcccgtcgt agatcgcctg taccgccgct
     5461 tcggtcgagc gctctcggtc ggtgtcctcg atgcgcagga ggaacttgcc gccggtgtgg
     5521 cgtgcatagg cccacgagaa cagcgccgtg cgggcgctgc cgatatggag gtaaccggtc
     5581 ggcgacgggg cgaaacgggt gacgacggtc ttgtcggcgg tcggggaagg catcgaggtc
     5641 cttggcgtcg gggcggcgcc gtgtgtagca tggcccccgg ggatcgcaag ggcagggggc
     5701 tcatgtcgga aaccctggaa accggggaca ttctgactgg accgccgcct gagcggcgcg
     5761 tcctgcagcc tgcgtccgtg ccgcgtgcgg cgccccggcc atcacccttc aagagcct
//
LOCUS       DATAZA010000042         1708 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1395162, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000042 DATAZA010000000
VERSION     DATAZA010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1708
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1395162"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1092)
                     /locus_tag="VHZ56_01100"
     CDS             complement(<1..1092)
                     /locus_tag="VHZ56_01100"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIR domain-containing protein"
                     /protein_id="HEX4296595.1"
                     /translation="MPDIFISYKKEERDVAARLATRLVEAGYDVWWDAALLAGDHFED
                     EISSVLANSRAVIILWSRRSVASDWVKAEAESARQQKKALPVIIDDLPIDSLPLLYRG
                     VHVAQLRDWQGDDAHAGFGELMKSVNDRLGAARGPELTAPQAQAGLAASAYEAEIWAA
                     IAAGNDPSADEYRAYLKRFGPNARFADLANIRIARLERESPPVLPPPRRRRRWWPAVV
                     LPVLALLLIGAGGLWLANGLTLKTFTNMLVPQETRDAAARCRTWGAGGDLDWHAMVPV
                     SSPFSLTDCQKAQAGFPDEGDYDGLLAMARIVDDPSAAADASALAQKGADLGSAIAND
                     VLGVMYQAGTNFKPDFSKAASYFKVAADKG"
     gene            1224..>1708
                     /locus_tag="VHZ56_01105"
     CDS             1224..>1708
                     /locus_tag="VHZ56_01105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015242864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF763 domain-containing protein"
                     /protein_id="HEX4296596.1"
                     /translation="MAQRAGSADLPLHGGRVPEWLAGRMSRLGAVVAEAICTEYGRDE
                     FLARLASPFWFQSFGAVMGMDWHSSGITTSVIGALKRGLLPLERELGLHVCGGRGRHS
                     RKTPDELMAIGERVGFDGAALAKASRLVAKVDSAAVQDGFALYLHGFIVADDGKWVVV
                     Q"
BASE COUNT          251 a          530 c          657 g          270 t
ORIGIN      
        1 gcccttgtcg gcggcgacct tgaagtaact ggcggccttg ctgaagtccg gcttgaagtt
       61 ggtgcccgcc tgatacatca cgcccagaac gtcgttcgcg atggcgctgc cgaggtcggc
      121 gcccttctgc gccagcgccg acgcgtcggc ggcggcggac ggatcgtcga cgatcctcgc
      181 catcgccagc aggccgtcgt agtcgccctc gtcggggaag ccggcctgcg ccttctggca
      241 gtcagtgagg ctgaaggggc tggagaccgg aaccatggcg tgccagtcga gatcgccacc
      301 ggcgccccag gtgcggcagc gggcggcggc gtccctagtc tcctgcggca cgagcatgtt
      361 ggtgaaggtc ttgagggtca gcccgttggc gagccataac ccgccggcgc cgatgaggag
      421 cagggcgaga acgggcagca cgaccgccgg ccaccagcgg cggcggcgac ggggcggcgg
      481 caagacgggc gggctctccc gctcgaggcg ggcgatgcga atgttcgcca gatcggcaaa
      541 gcgggcattc gggccgaagc gcttgagata ggcccggtat tcgtcggcgc tggggtcgtt
      601 gccggcggcg atcgccgccc agatctcggc ctcgtaggcg ctggcggcga gccccgcctg
      661 ggcctgcggc gcggtgagct cgggaccgcg cgccgcgccg agacggtcgt tcaccgattt
      721 catcagctcg ccgaagccgg cgtgggcgtc gtcgccctgc cagtcgcgga gctgggcgac
      781 gtgcacgccg cggtagagca gcggcaggct gtcgatcggc agatcgtcga tgatgaccgg
      841 gagggccttt ttctgctggc gggccgactc ggcctcggcc ttcacccagt cggaggccac
      901 cgaacggcgc gaccagagga tgatcaccgc gcgggagttg gcgaggaccg aggagatttc
      961 gtcctcgaag tggtcgccgg cgaggagagc ggcgtcccac cagacgtcat agccggcctc
     1021 gacgagccgc gtggccagcc gggccgcgac gtcgcgctcc tccttcttgt aggaaatgaa
     1081 gatgtccggc atggcgcccc gagccgttcc cgatgcgggg agtttatgca attgcaacgg
     1141 cgcgtcgagg gccaaggcgc ggggaagcac gacgactttg tttctggttt gttccgtgct
     1201 attccggtcg agggagtgga agaatggcgc aacgcgcggg aagtgccgat ctgccgctgc
     1261 atggcggacg ggtaccggag tggctggccg gccggatgag ccggctcggg gcggtggtcg
     1321 ccgaggcgat ctgcaccgaa tatggccgcg acgagttcct ggcacggctt gcgagcccgt
     1381 tctggttcca gtcattcggg gcggtgatgg ggatggactg gcattcctcc ggcatcacca
     1441 cgagcgtcat cggagcgctg aagcgcgggc tgttgccgct cgagcgcgag ttggggctgc
     1501 acgtctgcgg cggacgcggg cggcattcgc gcaagacgcc ggacgagctg atggctatcg
     1561 gcgagcgggt cggcttcgac ggcgcggcgc tcgcgaaggc gagccggctg gtggccaagg
     1621 tcgacagcgc ggcggtgcag gacggctttg cgctctatct ccacggcttc atcgtggccg
     1681 acgacggcaa gtgggtcgtg gtgcagca
//
LOCUS       DATAZA010000043         2806 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_235233, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000043 DATAZA010000000
VERSION     DATAZA010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2806
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_235233"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..484
                     /locus_tag="VHZ56_01110"
     CDS             <1..484
                     /locus_tag="VHZ56_01110"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582529.1"
                     /note="produces ATP from ADP in the presence of a proton
                     gradient across the membrane; the alpha chain is a
                     catalytic subunit; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEX4296597.1"
                     /translation="FLETNLFFQGIRPAVNVGISVSRVGGNAQIKAMKQVAGSLKGEL
                     SQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKPEEEVAVIFAGGQGY
                     LDDLPVNQVGPFERGLLGAFRSKHQDILSKIATEKALSDDLRVQLKAAIEAFKKTFTV
                     "
     gene            509..1384
                     /locus_tag="VHZ56_01115"
     CDS             509..1384
                     /locus_tag="VHZ56_01115"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEX4296598.1"
                     /translation="MASLKDLKNRITSVKSTQKITKAMQMVAAAKLRRAQEAAIAARP
                     YAERMSRVLASLGAAYAGRADAPALLGGTGKDQVHLLVVATGERGLAGGFNSSIARLA
                     REEATRLLREGKTVKILTVGRKGNDILKRVFADKIVNSISFRDVRQLGYANAQTVGDT
                     ILKMYANGEFDVATLFFATFKSVISQIPTALQLIPARFDAAAAGEASISYDYEPDEEA
                     ILNDLLPRNISVQLFRALLENNASFFGAQMSAMDNATRNAGDMIKRLTLVYNRQRQAQ
                     ITKELIEIISGAEAL"
     gene            1431..>2806
                     /gene="atpD"
                     /locus_tag="VHZ56_01120"
     CDS             1431..>2806
                     /gene="atpD"
                     /locus_tag="VHZ56_01120"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018430148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEX4296599.1"
                     /translation="MAEAGKPHGRVSQVIGAVVDVTFDGHLPAILNALETDNNGSRLV
                     LEVAQHLGENAVRTIAMDTTEGLVRGAAVTDTGEPISVPVGDETLGRIMNVIGEPVDE
                     AGPVKTKMRRAIHQDAPSFTEQSSEAQILVTGIKVVDLIAPYARGGKIGLFGGAGVGK
                     TVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKDPHENNGSTEGSK
                     CALVFGQMNEPPGARARVALSGLTVAEHFRDQGQDVLFFIDNIFRFTQAGAEMSALLG
                     RIPSAVGYQPTLATDMGALQERITTTNKGSITSVQAIYVPADDLTDPAPATSFAHLDS
                     TTTLNRAISEKGIYPAVDPLDSTSRMLSASIVGEEHYNTANRVQEILQRYKALQDIIA
                     ILGMDELSEEDKLTVARARKIERFMSQPFFVAEAFTGTPGIFVPLEDTIKGFAGLVKG
                     DYDHLPEAA"
BASE COUNT          536 a          944 c          914 g          412 t
ORIGIN      
        1 cttcctcgag accaatctgt tcttccaggg catccgcccg gcggtgaacg tcggcatctc
       61 ggtgtcgcgc gtcggcggca acgcccagat caaggcgatg aagcaggtgg ccggctcgct
      121 caagggcgag ctcagccagt atcgcgaaat ggcggccttc gcgcagttcg gctccgatct
      181 cgacgcggcg acgcagcgcc tgctcaaccg cggcgcgcgc ctcaccgagc tgctgaagca
      241 gccgcagttc tcgccgctga agccggaaga ggaagtcgcg gtgatctttg ccggcggcca
      301 gggttatctc gacgatttgc cggtcaacca ggtcggcccg ttcgagcgcg gcctgctcgg
      361 ggcgttccgt tccaagcacc aggacatcct cagcaagatc gcgaccgaga aggccctgag
      421 cgacgatctg cgggtgcagc tcaaggcggc gatcgaagcc ttcaagaaga ccttcacggt
      481 ctaacgagac caggagaccc gcggccctat ggcttcgcta aaggacctca agaaccggat
      541 cacgtcggtc aagtcgacgc agaagatcac caaggccatg cagatggtgg cggcggcgaa
      601 gctgcgccgg gcgcaggaag cggcgatcgc ggcgcgaccc tacgccgagc ggatgagccg
      661 ggtgctggcg tcgctgggcg cggcctatgc cgggcgcgcc gatgcgccgg ccctgctcgg
      721 cggcacgggc aaggaccagg tgcatctgct ggtcgttgca accggcgagc gcggcctcgc
      781 cggcggcttc aactcctcga tcgcgcggct cgcgcgtgaa gaggcgacgc gcctcctccg
      841 cgaaggcaag acggtcaaga tcctgaccgt cggccgcaag gggaacgaca ttctgaagcg
      901 ggtgttcgcc gacaagatcg tcaactcgat ctcgttccgc gacgtgcgcc agctcggcta
      961 cgccaacgcc cagaccgtcg gcgacaccat cctcaagatg tacgccaatg gcgagttcga
     1021 cgtggcaacg ctgttctttg ccaccttcaa atcggtgatc agccagatcc cgacggcgct
     1081 gcagctgatc ccggccaggt tcgacgcggc ggccgccggc gaggcgtcga tcagctacga
     1141 ctacgagccg gacgaggaag cgatcctcaa cgacctgctg ccgcgcaata tctcggtgca
     1201 attgttccgg gcgctgctcg agaacaacgc gtcgttcttc ggggcgcaga tgagcgccat
     1261 ggacaacgcg acgcgcaacg ccggcgacat gatcaagcgg ctgacgctgg tctacaaccg
     1321 ccagcggcag gcgcagatca ccaaagagct catcgaaatc atttcgggcg cggaagcgct
     1381 ctgacagcag gttcagggcc tgcgggtcct cgagaaggaa gggttagaaa atggcagaag
     1441 caggcaagcc ccacgggcgc gtgagccagg tcatcggcgc cgtggtggac gtcactttcg
     1501 atggccatct cccggccatc ctgaatgcgc tcgagaccga caacaatggc agccgcctgg
     1561 tcctcgaagt ggcgcagcac ctcggcgaga acgccgttcg caccatcgcc atggatacca
     1621 ccgagggcct cgtccgcggc gccgcggtga ccgacaccgg cgagccgatc tcggtgccgg
     1681 tgggcgacga gacgctgggc cgcatcatga acgtcatcgg cgagccggtg gacgaagccg
     1741 ggccggtcaa gaccaagatg cgccgcgcca tccaccagga tgcgccgagc ttcaccgagc
     1801 aatcgagcga agcgcagatc cttgtcaccg gcatcaaggt ggtcgacctc atcgccccct
     1861 atgcgcgcgg cggcaagatc gggctgttcg gcggcgccgg cgtgggcaag acggtgctga
     1921 tccaggagct gatcaacaac gtcgccaagg cgcatggcgg ctactcggtg ttcgccggcg
     1981 tcggcgagcg cacccgcgag ggcaacgacc tctatcacga gatgatcgag agcggcgtca
     2041 acaaggaccc gcacgagaac aacggctcga ccgagggcag caagtgcgcg ctggtgttcg
     2101 gccagatgaa cgagccgccc ggcgcccgcg cccgtgtcgc gctctccggc cttaccgtcg
     2161 ccgagcattt ccgcgaccag ggccaggacg tgctgttctt catcgacaac atcttccgct
     2221 tcacccaggc gggcgccgaa atgtcggcgc tgctcggccg catcccctcg gccgtgggct
     2281 accagccgac gctggccacc gacatgggcg cgctgcagga gcgcatcacc accaccaaca
     2341 agggctcgat cacctcggtg caggcaatct acgtgccggc cgacgatctg accgacccgg
     2401 cgccggcgac ctcgttcgcg cacctcgatt cgacgacgac gctcaaccgc gccatctcgg
     2461 aaaagggcat ctacccggcg gtggacccgc tcgattcgac ctcgcgcatg ctgagcgcca
     2521 gcatcgtcgg cgaagagcac tacaacaccg ccaaccgcgt gcaggaaatc ctgcagcgct
     2581 acaaggcgct gcaggacatc atcgccattc tcggcatgga cgagctctcc gaagaggaca
     2641 agctgacggt ggcgcgggct cgcaagatcg agcgcttcat gagccagccg ttcttcgtcg
     2701 ccgaggcgtt caccggcacg ccgggcatct tcgtgccgct cgaggacacc atcaagggct
     2761 tcgccgggct ggtgaagggc gactacgatc acctgcctga agcggc
//
LOCUS       DATAZA010000044         5745 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_931453, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000044 DATAZA010000000
VERSION     DATAZA010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5745
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_931453"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..197)
                     /locus_tag="VHZ56_01125"
     CDS             complement(<1..197)
                     /locus_tag="VHZ56_01125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296600.1"
                     /translation="MTMIETPGEMIAPPPAAAGGDARASLLADVLAHIRLSGALFLRG
                     EYAGLWALDSPGSCDLIELLAP"
     gene            399..863
                     /locus_tag="VHZ56_01130"
     CDS             399..863
                     /locus_tag="VHZ56_01130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010912505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296601.1"
                     /translation="MPLLGGMAMAADSNPLADKVRAADARFADVAVAKAEGYAPIPCV
                     SGPDGGAMGIHYVNQKLLDDPAVDVAHPEAVLYEPQADGSLKLVAVEYITEKGPGALG
                     GQLFSFTNEPNRYGLPAFYALHVWAWRDNPMGVFADMNPNVSCSATPMGDGM"
     gene            902..1174
                     /locus_tag="VHZ56_01135"
     CDS             902..1174
                     /locus_tag="VHZ56_01135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4242 domain-containing protein"
                     /protein_id="HEX4296602.1"
                     /translation="MKRYVIEREVPGIGLNDQAGLCSIAKTSNAAITKLSQRVQWMHS
                     YVTNDKSFCIYLADDETALREHARISGFPANKITLVNAVIDPTTAG"
     gene            1296..1490
                     /locus_tag="VHZ56_01140"
     CDS             1296..1490
                     /locus_tag="VHZ56_01140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296603.1"
                     /translation="MLYRRRKWARLRRLLRSIGGVFRQKRDAGPSAADRRYLDSLSDA
                     RLERDLGLMRLRGDRYRPWL"
     gene            complement(1500..2729)
                     /locus_tag="VHZ56_01145"
     CDS             complement(1500..2729)
                     /locus_tag="VHZ56_01145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1501 domain-containing protein"
                     /protein_id="HEX4296604.1"
                     /translation="MTMASLLTDAMLCPSRRTFLAGAGAFIAWANLPRAAYAAQGRDP
                     RFVAVILRGAMDGLAVVPPIGDPDFPALRGDLAIGTGSYGDTLPLDGFFALNSAMPLL
                     HQRYLSGEALLIHAVATGYRDRSHFDGQDVLESGATGPRLSPTGWLNRAALAIPAGDR
                     VAPVSGLAAMPTVPLILRGDAPTLTWTPPELKTASSDTATRLIDLYSTVDPEFAKILS
                     AGLSTNALAGAADPMKVNGVAASFRSLAAGAATLLVDDAGPRLAALSYDGWDTHTNEG
                     AGEGRLASLLGALDGALDALATTMAPVWKDTVVAVMTEFGRTARINGNEGTDHGTATT
                     AFLLGGAVKGGRVLADWPGLKDSQLFEDRDLYPSLDLRGVLKGALRDHLGIAERDLSG
                     KVFPDSIGIKPVDGLVA"
     gene            complement(2726..4144)
                     /locus_tag="VHZ56_01150"
     CDS             complement(2726..4144)
                     /locus_tag="VHZ56_01150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1800 family protein"
                     /protein_id="HEX4296605.1"
                     /translation="MARETPLSFIALQRFGLGARPGDLAAVAADPRGAVLAEIAPGAA
                     LIDDPTLPDTVAALGTIRAIQKARQAAKAGATPAPAMMAPDSMMDPSEPSAAAAPPPD
                     PMKPGNPIAAEIAARLAQAAAAQIGFAERWAMFWANHFAVQAATNEVVRWTAGPFDRE
                     AIRPHVFGRFVDLLFAATRHPAMLLSLNNAGSIGPDSKAGLKRHLGLNENHARELMEL
                     HTIGVTSGYTQADVTSFADVLTGWTFGNNPDQPKTFGQFTFNANAHEPGPQTILGTVY
                     AQPGVRQGEAVLAMLAAHPATATHVATELVRYFVADTPPPDLVAALAATFTTTGGDLA
                     AVARALVGADAAWSAPMQKLRLPQEYLLAASRALAVAPRPPALIKDLDTLGQPLFDPP
                     SPEGYHDDAATWLAPDAMTSRLDIAQTYAQLADADADPRRVADAVLGDAQSDATRDAI
                     ARAESPVQGLTLLLMSPEFQRR"
     gene            complement(4328..4981)
                     /locus_tag="VHZ56_01155"
     CDS             complement(4328..4981)
                     /locus_tag="VHZ56_01155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013894348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX4296606.1"
                     /translation="MPPIITAFERSPDGGKGLSRDTRVRWALEELGLPYEVRLVSFAA
                     MKQPAHLALHPFGQIPTYQQGDLVLFESGSIVLHLAERHPGLLPADADARARAITWMF
                     AALATVEPPILDLVTARLLEADKPWAAERLPLVQERIRARLHPLAARLGDADWLDGPF
                     TAGDLMLVHVLQRLKPSGMLGEFPSLAAYVARAEARPAYQRAFAAQLAVNAPPPAQP"
     gene            5141..>5745
                     /locus_tag="VHZ56_01160"
     CDS             5141..>5745
                     /locus_tag="VHZ56_01160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEX4296607.1"
                     /translation="MHLLLVDGSGYIFRAFHALPQLTRKSDGLPVGCVKGFTEMLWKL
                     MADLKDEDRPTHMAVIFDYSSKTFRDDIYPEYKSHRPPMPEELVPQFPLTRSATRAYS
                     IPSIEMEGWEADDIIATYACMARDQGAKVTIASSDKDLMQLVEPNGSIRLLDTIVRPG
                     QPPLRWIGPEQVFDKFGVTPDKVIEVQALCGDAVDNVPGVPG"
BASE COUNT          929 a         1853 c         2133 g          830 t
ORIGIN      
        1 ggcgccagca gttcgatgag gtcgcagctg ccgggcgagt cgagcgccca gaggccggcg
       61 tattcgccgc gcaggaacag cgctccagac aggcggatat gcgccagcac atcggcgagc
      121 aggctggcgc gcgcgtcgcc gccggcggcg gcaggcggtg gggcgatcat ttcgcccggc
      181 gtttcgatca tggtcatttc tggtggcccg aataaatggt tgcccccacc gcgccgctaa
      241 atcgcgcggc aatcaccgtt cgtcaatacg aggcacccat gcaatatttc acttccagcc
      301 ggaataaagc cggcaacgcc gtgttcaccg cgcgcagtgg taagacgact taccacccgc
      361 gcaagccgct ccggcccttg ctggccgggc ttttcgcgat gccgctgctc ggcggcatgg
      421 cgatggcggc cgacagcaac ccgctcgccg acaaggtgcg ggcggccgac gcccgcttcg
      481 ccgacgtggc cgtggccaag gccgagggct acgcgccgat cccctgcgtg tcggggcccg
      541 atggcggggc gatgggcatc cactacgtca accagaagct gctcgacgat ccggcagtcg
      601 acgtcgcgca ccccgaagcg gtgctctacg agccgcaggc ggacggcagc ctgaagctgg
      661 tggccgtcga atacatcacc gaaaaggggc cgggagcgct cggcggccag ctgttcagct
      721 tcaccaacga gcccaaccgc tacggcctgc cggccttcta cgcgctgcac gtgtgggcgt
      781 ggcgggacaa cccgatgggg gtgttcgccg acatgaaccc gaacgtgtcg tgttcggcaa
      841 cgccgatggg cgacggcatg taaccgggca ctccgccccc aaccagcaaa ggataccgaa
      901 catgaaacgc tatgtcatcg aacgcgaggt gccgggcatc ggcctcaacg accaggccgg
      961 cctctgcagc atcgccaaga cctcgaatgc cgcgatcacc aagctctcac agagagtgca
     1021 gtggatgcat tcctatgtca ccaacgacaa gagcttctgc atctatcttg cggacgacga
     1081 gacggcgctg cgcgagcacg cccggatcag tggctttccc gccaacaaga tcacgctggt
     1141 gaacgcggtg atcgatccga ccacggccgg ctgagccggc ggcacgcctc ccggggagat
     1201 cggtcttccc gggagagcgc ggcggctgtt gtcgcgccgc gcaacacccc tggttccagc
     1261 gcggctggaa catgtctcca gtcaaccgag cccccatgct gtatcgccga cgtaaatggg
     1321 cgcgcctccg gcgcctgctg cggagcattg gcggcgtgtt ccggcaaaag cgagacgccg
     1381 ggccgagcgc tgccgaccgc cgctatctcg acagcctctc cgacgcgcgg ctcgaacgcg
     1441 acctcgggct catgcgcctc cgcggcgacc gctatcggcc ctggctctag gccggaaatt
     1501 caggcgacga ggccgtccac cggcttgatg ccgatcgagt ccggaaacac cttgcccgac
     1561 aggtcgcgct cggcgatgcc gaggtgatcg cgaagcgcgc ccttgagcac gccgcgcaga
     1621 tcgagcgagg ggtagaggtc gcggtcctcg aagagctggc tgtccttgag gccgggccag
     1681 tcggcgagga cgcggccgcc cttgacggcg ccaccgagca ggaaggcggt ggtcgcggtg
     1741 ccgtggtcgg tgccctcgtt gccgttgatg cgggcggtgc ggccgaactc ggtcatcacc
     1801 gcgacgacag tgtccttcca gaccggcgcc atggtggtgg ccagcgcatc gagcgcgccg
     1861 tcgagcgcgc cgagcaggct cgcgagccgc ccctcaccgg ctccctcgtt ggtgtgggtg
     1921 tcccagccat cgtagctgag cgccgcgagg cgcgggccgg cgtcgtcgac gagcagtgtc
     1981 gccgcgcccg ccgcgagcga gcggaacgaa gcggcgacgc cgttgacctt catcggatcg
     2041 gccgctccgg ccagcgcatt ggtgctgagg ccggcgctga ggattttggc aaactccgga
     2101 tcgacggtcg aatagaggtc gatcagccgt gtcgcggtgt cggaactggc ggtcttgagc
     2161 tcgggcggcg tccaggtgag ggtcggggca tcgccgcgca ggatcagcgg caccgtcggc
     2221 atggcggcga ggccggagac aggggcaacc cgatcgccgg cggggatcgc cagcgcggcg
     2281 cggttgagcc agcccgtggg gctcaggcgc gggccggtgg cgccgctctc gaggacgtcc
     2341 tggccatcga aatgcgagcg gtcgcgatag ccggtggcga cggcgtggat cagcagggct
     2401 tcgcccgaga gatagcgctg gtggagcagc ggcatcgccg agttgagcgc gaagaagccg
     2461 tcgagcggca gcgtgtcgcc atagctgccg gtgccgatgg cgagatcgcc gcggagcgcc
     2521 gggaagtccg gatcgccgat cggcggcacg accgccagcc cgtccatggc gccgcgcagg
     2581 atgacggcga cgaagcgcgg gtcgcggccc tgcgcagcat aggccgcgcg cggcaggttg
     2641 gcccaggcaa tgaacgcccc ggcgccggcg aggaaggtgc ggcgcgacgg gcacagcatg
     2701 gcatcggtga gcaggcttgc catcgtcatc tcctctggaa ttcagggctc atcagcagca
     2761 gcgtcaggcc ctgcacgggg ctctcggcgc gggcgatggc gtcgcgggtg gcgtccgact
     2821 gcgcgtcgcc cagcacggca tcggcgacac ggcgcggatc ggcgtcggca tcggccagct
     2881 gggcgtaggt ctgggcgatg tcgaggcggc tggtcatggc gtcgggcgcc agccaggtcg
     2941 cggcgtcgtc gtggtagccc tcgggcgagg gtggatcgaa gagcggctgg ccgagggtat
     3001 cgagatcctt gatcagcgcc ggcggcctcg gcgcgacagc gagcgcgcgg gaggcggcga
     3061 gcaggtactc ctgcggcagc cgcagcttct gcatcggcgc gctccaggcg gcgtcggcac
     3121 cgaccagggc tcgcgccacc gcggcgaggt cgccgcccgt ggtcgtgaag gtcgccgcca
     3181 gcgccgcgac gaggtcgggc ggcggggtgt cggcgacgaa atagcggacc agttcggtgg
     3241 cgacgtgggt ggcggtcgcc gggtgggcgg cgagcatcgc cagcacggcc tcgccctgcc
     3301 tgacgccggg ttgggcatag acggtgccga ggatggtctg cgggcccggc tcgtgcgcgt
     3361 tggcattgaa ggtgaactgg ccgaaggtct tcggctggtc gggattgttg ccgaaggtcc
     3421 agccggtcag cacgtcggca aagctcgtca cgtcggcctg ggtgtagccg gaggtgacgc
     3481 cgatggtgtg gagctccatc agctcgcggg cgtggttctc gttgagcccg agatggcgct
     3541 tgaggccggc tttggagtcg gggccgatgg agccggcatt gttgagcgac agcagcatgg
     3601 cgggatgccg cgtcgcggcg aacagcagat cgacgaagcg gccgaagacg tgcgggcgga
     3661 tggcctcgcg atcgaacggc ccggcggtcc agcgcaccac ctcgttggtc gcggcctgga
     3721 cggcgaagtg attggcccag aacatcgccc agcgctcggc gaagccgatc tgcgccgcgg
     3781 cggcctgggc gaggcgggcg gcgatttcgg cggcgatggg attgcccggc ttcatcggat
     3841 cgggcggcgg tgcggcggcg gcagacggct ccgacgggtc catcatgctg tcgggcgcca
     3901 tcatggccgg cgcgggcgtg gctccggcct tggcggcctg acgggccttc tggatggcgc
     3961 ggatggtgcc cagcgcggcg accgtatcgg gcagcgtggg atcgtcgatg agcgccgcgc
     4021 cgggcgcgat ctcggccagc acggcgccac gcggatcggc ggcgacggcg gcgagatcgc
     4081 cggggcgggc accgaggccg aagcgctgca gcgcaatgaa cgacaggggc gtctctcgag
     4141 ccatggcgag ctccggttcc gcaaacgacg acgctgggat gacgatgccg cacaagccgg
     4201 cgcagattgc ggcgggatgt ccgccggatc agggcatttt cgcgacgcgg ctgcctaaag
     4261 ctttgcaaaa ccgcaatgaa ccggaaaggt gcgattgcgc cagcaggatg gcaaggagac
     4321 ctggctctta cggctgcgcc ggcggcggcg catttaccgc gagctgcgcg gcgaacgcgc
     4381 gctggtaggc agggcgggct tcggcgcggg cgacataggc ggcgaggctg gggaattcgc
     4441 ccagcatgcc ggatggcttc agccgctgca gcacatgcac cagcatcagg tcgccggcgg
     4501 tgaacgggcc atcgagccag tcggcatcgc ccagccgcgc ggccagcggg tgcagccggg
     4561 cccggattcg ctcctgcacc agcggcaggc gctcggcggc ccagggcttg tcggcctcca
     4621 gcaatcttgc cgtgacgaga tcgaggatcg gcggctcgac cgtggcgagc gccgcgaaca
     4681 tccaggtgat ggcacgggcc cgcgcatccg catcggccgg cagcaggccg ggatggcgct
     4741 cggcgagatg gagcacgatc gagccgctct cgaacagcac caggtcgccc tgctgatagg
     4801 tcgggatctg gccgaagggg tgcagcgcca gatgggccgg ttgcttcatc gccgcgaacg
     4861 agacgagccg aacctcgtag ggcagcccca gctcctcgag ggcccagcgg acgcgggtat
     4921 cgcgcgacag ccccttgccg ccatcgggcg agcgttcaaa ggcggtaatg atcgggggca
     4981 tcgagcggct ccggcaatgg acagggtgca actggtcgag cgagtggcgg agttttcgac
     5041 aggacgagga cgaattttct gcgcccggca atttccctgt caggctttag caggaccgga
     5101 tgatgcccta aggtgcgggc cgctcaaacg gaaacaatca atgcacctgc ttctcgtcga
     5161 cggctcgggc tacatcttcc gcgcgttcca tgcgctgccg cagctgacgc gcaagagcga
     5221 cgggctgccc gtcggctgcg tcaagggctt caccgagatg ctgtggaagc tgatggcgga
     5281 cctcaaggac gaggaccggc cgacgcacat ggcggtgatc ttcgactatt cgagcaagac
     5341 cttccgcgac gacatctacc ccgagtacaa atcgcaccgg ccgccgatgc cggaggagct
     5401 ggtgccgcag tttccgctga cgcgttcggc cacccgggcc tattcgatcc cctcgatcga
     5461 gatggaaggc tgggaggccg acgacattat cgcgacctat gcctgcatgg cgcgcgacca
     5521 gggcgccaag gtgaccatcg cgtcgtcgga caaggacctg atgcagctgg tcgagcccaa
     5581 cggttcgatc cgcctgctcg acaccattgt gcggccggga cagccgccgc tgcgctggat
     5641 cgggccggag caggtgttcg acaaattcgg ggtgacgccg gacaaggtga tcgaggtgca
     5701 ggcgctgtgc ggcgacgcgg tggacaacgt gcccggggtg ccggg
//
LOCUS       DATAZA010000045         1738 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1395722, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000045 DATAZA010000000
VERSION     DATAZA010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1395722"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            379..1725
                     /locus_tag="VHZ56_01165"
     CDS             379..1725
                     /locus_tag="VHZ56_01165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEX4296608.1"
                     /translation="MRPKQHETTNEGDLFRARLDQIINLKHELVQLAGKIDWAWLDEQ
                     IAPLYSDKGRPGVESRFVIGLLLLKHMFGLSDEGVCERWVYDPYFQHFTGEMFFQHTF
                     PHERSDLSHWRKRLGDKLELLLAESLRVAHDSGALRTRDLARVTVDTTVQPKNIAFPT
                     DAKLLHAAIKGLNRLARRHGVRLRQSYVRVARRAAMMAGRYAHAKQFKRHHRQVRFLR
                     TRLGRLIRDIRRKITGREPVEAAFEGPLSRASQIRSQRPRQRGWKLYSFHAPEVECIG
                     KGKARAPYEFGVKVSIVTTNACPPGGQFVLHTAALPGNPYDGHTLRVVVEDTQRLTGR
                     EIERVYVDKGYRGHDAPQPRRVFISGQKRGVFGAIKRELRRRSAVEPLIGHLKQQGHL
                     GRCYLKGRAGDAANAILTAAGYNFRRILVWLRMLLRLVLYALWLGNPDQTSLIPAS"
BASE COUNT          311 a          603 c          537 g          287 t
ORIGIN      
        1 gccacctgtt gcgaatcttg gacacaatcg aacgtcccgc tgagtgaggg gagccgagcc
       61 gcccgcgatg ccgcggggca tgcagcgctc ttgggcaagc taggattgcg gaccggttcg
      121 gaagcccttt ccgatccaac ccaacgtgag cccaatcagg aggaccgcaa ccgggggcgc
      181 gattgtccac gtcacggcct ctgttagata gtcgtcggtg aagaacgtct aagcggttga
      241 aggcgaatct gttttcggcg gcagggctgg tttcggattg caaggttcgg cggtcgaacg
      301 tcgcagagcc ttgcgatttc gctttaggga ttccgtcggc cggtgaccta tgattcgatg
      361 gtcgtatcgg agaagacgat gcggccgaag cagcacgaga cgacgaacga aggcgatctg
      421 ttccgagcca ggctcgacca gatcatcaac ctgaagcacg agctggtgca gctcgccggc
      481 aagatcgact gggcatggct cgacgagcag atcgccccgc tctacagcga caagggcagg
      541 cccggcgtcg agagccgctt cgtgatcggc ctgctgctgc tcaagcacat gttcggattg
      601 tccgacgaag gcgtctgcga acgctgggtc tacgacccgt acttccagca cttcaccggc
      661 gagatgttct tccagcacac cttcccgcac gagcgctccg atctcagtca ctggcgcaag
      721 cgcctgggcg acaagctcga gctgctgctg gccgagagcc tgcgggtggc acacgacagc
      781 ggagcgctgc gcaccaggga cctcgcgcgg gtcaccgtcg acaccacggt gcagcccaag
      841 aacatcgcct tcccgaccga tgccaagctg ctgcatgcgg cgatcaaggg gctcaatcgc
      901 ctggcccgcc gccacggcgt gcggctgcgg caatcctacg tccgcgtcgc ccggcgggcg
      961 gcgatgatgg cggggcgcta tgcccacgcc aagcagttca agcggcacca ccggcaagtg
     1021 cgcttcctgc gcacccggct gggccggctg atccgcgaca tccgccgcaa gatcaccggc
     1081 cgcgagcccg tcgaagcggc cttcgagggt ccgctctcgc gggcctccca gatccgctcg
     1141 caacggccgc gccagcgcgg ctggaagctc tattccttcc acgccccgga ggtcgagtgc
     1201 atcggcaagg gcaaggctcg cgcgccctac gagttcggcg tcaaggtctc gatcgtcacc
     1261 accaatgcct gtccgccggg cggccagttc gtgctccaca ccgccgctct gcccggcaat
     1321 ccctacgacg gccataccct gcgcgtcgtc gtcgaggaca cccagcgcct caccggccga
     1381 gagatcgagc gggtctacgt cgacaaggga taccgcgggc acgacgcgcc ccagccgcgc
     1441 cgcgtcttca tctcaggcca gaagcgcggc gtcttcggcg ccatcaaacg agaactccgc
     1501 cgccgctccg ccgtcgagcc cctcatcggc cacttgaagc aacaaggcca tctcggccgc
     1561 tgctacctca agggtcgtgc cggcgatgcc gccaacgcca tcctcaccgc tgccgggtac
     1621 aacttcaggc gcatcctcgt ctggctcagg atgcttttgc gcctcgtcct gtatgccctg
     1681 tggcttggca accccgacca aacatcgctc attccggctt cttaacgggc gactaaat
//
LOCUS       DATAZA010000046        13447 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4064944, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000046 DATAZA010000000
VERSION     DATAZA010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 13447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13447
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4064944"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1050)
                     /locus_tag="VHZ56_01170"
     CDS             complement(<1..1050)
                     /locus_tag="VHZ56_01170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296609.1"
                     /translation="MDDTYVAPKAAARRWTWRIPAYILLPFYLMLVGVLLRYAVYVRN
                     TGHYGVTDYLRALCVYDCNAYERLSLYGYEGRPSGFDKGDANNWAFFPLYSILVWAVS
                     KVTGLSILVGGSILTSLLTVWAAIVAWPLFDNRFRAYFVFCVFLFLGPVSYYFSTLYT
                     EALFILLTVAGFVLLKQRDYVTAGVTGALMSATRSTGLLFAAAILIAAFQNHLKDGGT
                     KRQFFRTLWKRTDLLLAVGLVPVGISVFAVYMWIYSGDALAFVHIQRAWGRAFTDPFA
                     NLWIALNLQFSTYHNFSSISTDLAFALAAIAGVVLSAVMAWRGRWDWAIFSLFGVLLP
                     LSTNTYSMIRFVVGLA"
     gene            1322..2242
                     /locus_tag="VHZ56_01175"
     CDS             1322..2242
                     /locus_tag="VHZ56_01175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296610.1"
                     /translation="MALDNLVIAAAPVTAGTQEHHSYLDWPAIIGGIVLASAISIVLL
                     AFGSAIGLSFANFRTYTGVSPVWVGIAAASWLLWVEISSFMCGGYLAGRMRRRFHDAS
                     EHESDVRDGAHGLLVWAGALVIGVVLAASGIGAALTAIGSTAATLTTAASTAADKLAS
                     PLDPNAYFADELFRAPAPAAGAPAAAAPAANGTDVRAEAGRILATDATTGSIGDDDKA
                     YLAQLVATNTGLPADQAKARVDQVLASVDKARQAAADAAETARKMTVLAAFLTAASLL
                     IAGLGAYWAAMKGGRHRDEGTMFTGIFGRY"
     gene            complement(2385..4313)
                     /locus_tag="VHZ56_01180"
     CDS             complement(2385..4313)
                     /locus_tag="VHZ56_01180"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX4296611.1"
                     /translation="MHKLLAKQLEKARRADGTVDLDRLLELVAEAYEESVQDRTRTDR
                     SITLMVEELDALQAGLEADIAERTAELSASRKALKLQNRRMAEALDSTGQAISIYDQN
                     QQLVFCNERFLALYRLPRRLGRRGTGFEAILRGRVTANSHIGTDIERYVIDRVRLAEH
                     QFASTEVNTLNSGEVIAVTHQPLAGGGWISTHKDVTEFNRLQEELAHRAYHDALTGLP
                     NRHMLQERLAQNVATADGLGSFALLLIDLDGFKAINDTLGHAAGDQALREIGRRLEIA
                     TGSAGMAARMGGDEFAVIMDVGSVARDAHQLAIRAVEAGKEPFVIDGQRTDVGLSVGI
                     AVAPGDGDTPDALLKNADLALYAAKKDRRGSYRFFEPAMDKALRDRRQLERDLGVALG
                     RGEFELYYQPILNLKTQAFSGFEALLRWRHPELGLVSPARFVPVAEETGMIVPIGEWV
                     LREAIAEAASWPSPLRVAINVSSVQFQRGNVVATIMNALGSAGLAPGRVEIEITESVF
                     FENSASNLDALRQLHALGLKIALDDFGTGFSAMSYLLSYPFDKIKIDGTFVRAIDNAA
                     GALAIVRAIAEIGHGMGITTTAEGVETAEQLRNVHAAGYSEAQGFLVARPMPASQVRQ
                     MLSGEDDRMPVAPMQKAG"
     gene            complement(4315..5466)
                     /locus_tag="VHZ56_01185"
     CDS             complement(4315..5466)
                     /locus_tag="VHZ56_01185"
                     /inference="COORDINATES: protein motif:HMM:NF020084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FIST N-terminal domain-containing protein"
                     /protein_id="HEX4296612.1"
                     /translation="MRASRLTWTDVHGWADDPEQPGRADLLLYFGDRSLLASDRAFAA
                     LNARFPDAQIVGCSTGGQMAAGEVSDDLLSVLALDFAQTPIRVAAAEVTDAAQSHSAG
                     AAIGAQLTAPDLAGIFILSDGLHVNGSALVEGVASAVGRDVPVSGGLAGDGAAFAETL
                     VGCNGRPKARSVAAVGFYGAAIRFGHGSAGGWDVFGPKRRITRSDGNVLLSVDGKPAL
                     DLYKLYLGPEDSQKLPGSALLFPMRISDPRHPAQSVVRTVLSVDAAAGSMTFAGDMPE
                     GWTAQLMRGSFSRLCAGAAAATQQAATALGAEADGDGAAILVSCIGRRLLMGQRIDEE
                     IEAATAELPADCPAVGFYSYGEISPHVDTGQAQLHNQTMTVTLLREKAA"
     gene            complement(5568..6044)
                     /locus_tag="VHZ56_01190"
     CDS             complement(5568..6044)
                     /locus_tag="VHZ56_01190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008594691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4296613.1"
                     /translation="MADLLVRLYDLPAFAAEATVRDGGVVVRRALPPEREVVLDWIAA
                     RFSSAWVGEAALALSQQPPTMLIAVKGPELLGFACYDASARGFFGPTGVDAAARGNGI
                     GEALLAATLRAMREAGYAYAVIGDPGPVAFYTKRLDALEIPKSKPGLYAGMLRGKG"
     gene            complement(6044..7981)
                     /locus_tag="VHZ56_01195"
     CDS             complement(6044..7981)
                     /locus_tag="VHZ56_01195"
                     /inference="COORDINATES: protein motif:HMM:NF012931.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HEX4296614.1"
                     /translation="MAVDRRDGFVLRSIWEPGESGGRYRLILANRGKDSIANFRLGIS
                     GQVRITAGAETSNGHIVTQLSNYAELAPPAGFVLAPGAEWEIGIRQLDFPLRHWTDGV
                     AAGFVILGDGRTLPAVTLPTEQAGSAPYRRGTMRLAAEADAAVSIVPWPNSVAVSGRR
                     SPPQGLDIATGGARSAAAAKDAFAELVALLFPGEGLLRPAREDGLPVMLVEDSGLGPE
                     AYRLGFFAHGAKLEAASATGFLYGLISLGQMLRGARLERERFSFPVAGSIEDSPAMGF
                     RGCHLDVARRFYGTAEISRFLALLAWNKLNRFHWHLSDDEAWRVEIAAYPRLTEIGAW
                     RGYGLALPPLLGSGPEKSGGVYTQADVRTLVALAGRFGIEVIPEIDVPGHCYALLAAL
                     PELRDVGENGPYASIQSFPNNCLNPAVDAVYGALETIFGELVELFPGRYFHVGADEVP
                     AGAWQTSPAAKALGRSLGVEGTGPLQAKFLQRVQAFLTARGKITGAWEEAAHGGGIDK
                     ASSYLVGWVAVETSQKLAAEGYPVVVAPGQAYYLDMANGAEWHEPGAGWAGWSSPEKT
                     YGFDPVAGWSDGEKQKFMGVQACIWSEPMGDRAVFDRLVFPRLSAIAESGWTRAERKD
                     FARFSGLVGLMPNLYGQREGM"
     gene            complement(8004..9062)
                     /locus_tag="VHZ56_01200"
     CDS             complement(8004..9062)
                     /locus_tag="VHZ56_01200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008875270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-TA family PLP-dependent enzyme"
                     /protein_id="HEX4296615.1"
                     /translation="MTEIADLDTPCVVIDLTRVEANLQRAQAHADANGYRLRPHIKTH
                     KIPRFAQRQVALGAKGITVQKVGEAEVMADAGLSDIFVPYNIVGTAKLKRLRALNERV
                     TLSVTADSPDTVAGYAATFADAGRPLTVLVECDSGGGRCGVQSPAQALALARQIEMAP
                     GLRFGGIMTYAKRGDYAAMDQWMAEAKATIEAAGIAVPMVTSGNSPDMWHTGPTVITE
                     RRPGTYIYYDRAQVSFGAAAYADCALTVLATVVSRPTPTRAIIDAGSKALTSDLFGQT
                     GYGVVQGHEDIVIDNLSEEHGVIVLPAASDWPRVGERLRIIPNHCCVVSNLYDVVNVV
                     GGNGEVEVVPVAARGRVD"
     gene            9149..10243
                     /locus_tag="VHZ56_01205"
     CDS             9149..10243
                     /locus_tag="VHZ56_01205"
                     /inference="COORDINATES: protein motif:HMM:NF022436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2793 domain-containing protein"
                     /protein_id="HEX4296616.1"
                     /translation="MSETARLSLPYIAPQQAQKQVTYNTAMAALDQLVQPVVKSRTTT
                     SPPGSPAEGDTYIVAPSATGGWAGADGKFAAWLSGAWSFTTPADGWLAYVLDAAELAV
                     HASGAWSSFVTTGGTSLAKLGINTTADLTNRLAVAATSSLFTHVGAGHRLALNKATAA
                     DTASLLLEDNLSGRAEIGLTADDALHVKVSPNGSSWVEALNIAQASGLVSLPIGQLAF
                     PATQNPSSSPNVLDDYEEGTWTPVLQFSGASTGIAYGTPTLGRYTKIGRAVFLTAAVT
                     LTSKGSATGSAQISGLPFSTVNDALLNSCTVGFASAMSTVTGAVLMMIQANATRINIY
                     HSNNGAAAALTNSNFGATSSLYFSAAYDTV"
     gene            10324..11562
                     /locus_tag="VHZ56_01210"
     CDS             10324..11562
                     /locus_tag="VHZ56_01210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HEX4296617.1"
                     /translation="MPASPIDPAKLDKLAEIAIRVGLGLAPGQDLYMTAPTGALPLAR
                     RIAAAAYRAGAGLVTTNFSDEEMTLARFRNAGDQSFDRAADWLFEGVAKAFDANTARL
                     AISGDNPMLLAAEDPDKVGRANRATAKAYKPAQTRIVNFDINWTIVPFPGTSWAKEVF
                     PGVPDDVAVEKLADAIFAATRVDTPDPIAAWAAHNGRLKERQDWLTARDFRALKYTGP
                     GTDLTLGLADGHAWKGGASKARNGIVCNPNIPTEEVFTTPHRLRVDGRVRSTKPLSHN
                     GTLIEGIEVRFEAGRIVEVHARRGEDVLVKAMDTDEGGRRLGEVALVPHSSPISASGI
                     LFYNTLFDENASSHIALGQCYSKCFRNGDTITPEEVEQRGGNKSFIHIDWMIGSAEID
                     VDGIGQDGSLTPVMRKGEWA"
     gene            11729..>13447
                     /locus_tag="VHZ56_01215"
     CDS             11729..>13447
                     /locus_tag="VHZ56_01215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018493494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HEX4296618.1"
                     /translation="MALNVSQRLERLKVRIEELKYWRARAGVVVDGWTVDGAPIAIGG
                     AWPSRDGVRKFAATAEVPAHWPLEETRLFLDLGGEGLATLSYPNRHAASFGVDPYHRE
                     FPLQHRQVAITAEATAREPFGVPVRNPHLNRAVLQWIDGPVHRFHLLLRQIAEAVSVL
                     GSHEVVPHLLTAAEDAQRSLDWPSDTADYLARMAPSPQQQQIWQLPPLIDTPAALDQG
                     QRASVAAAHDALVETLRALKERFPPQGELLLTGHAHIDLCWLWPYDETRRKMRRTFHT
                     ALGLMEASDDFRFNQSTAQYYAQIEQDDPALLKAIKARVKSGQWETIGGMWVEPDTNM
                     PTGESLVRQILYGQLYFERQFGSRHTVCWLPDCFGFSGALPQLLRQGGIESFFTLKVN
                     WSETNRIPADLFWWEGLDGSRVLTHTFDNPMHGYNGFVQPDCYVPTWQNFRGKTQHDT
                     SLLAVGYGDGGGGTTPEMVEREVQLRDFPAIPQARWGRVADFFDRAHARAKQVELPVW
                     TGEIYLELHRATLTTQSGIKRMHRHAERALITAETAASLAHMLGAAAPKSLEDHWRYV
                     LKNEFHD"
BASE COUNT         2121 a         5039 c         4252 g         2035 t
ORIGIN      
        1 cgccagcccg accacgaagc ggatcatcga ataggtgttg gtcgagagcg gcagcagcac
       61 cccgaacagc gagaagatcg cccagtccca gcggccccgc cacgccatca ccgccgacag
      121 caccacgccg gcgatggccg cgagcgcgaa ggccaggtcg gtcgagatcg agctgaaatt
      181 gtggtaggtc gagaactgca ggttgagcgc gatccacaaa ttcgcgaagg gatcggtgaa
      241 ggcccggccc caggcgcgct ggatgtggac gaaggcgagc gcgtcgcccg aatagatcca
      301 catgtagacc gcaaagacgc tgatccccac cggcaccagc ccgaccgcca gcagcaggtc
      361 ggtgcgcttc cacaaggtgc ggaagaactg ccgcttggtg ccgccatcct tgagatggtt
      421 ctggaacgcc gcgatcagga tcgccgccgc gaacagcagc ccggtcgaac gcgtcgccga
      481 catcagcgcg ccggtgaccc cggccgtcac atagtcgcgc tgcttcagca gcacgaagcc
      541 cgcgaccgtc agcaggatga acagcgcctc ggtgtagagc gtcgagaaat agtaggagac
      601 cggacccagg aagaggaaaa cgcagaacac gaaataggcg cggaagcggt tgtcgaacag
      661 cggccacgcg acgatcgccg cccataccgt cagcaggctc gtcaggatcg agccgcccac
      721 caggatcgac agcccggtga ccttgctcac cgcccacacc aggatcgaat acagcgggaa
      781 gaaggcccag ttgttggcgt cgcccttgtc gaaccccgac ggccggccct cgtagccgta
      841 gagcgacagc cgctcatagg cgttgcagtc gtagacgcag agcgcccgca ggtaatcggt
      901 caccccgtag tgcccggtgt tgcgcacata caccgcgtag cgcagcagca cgccgaccag
      961 catcaggtag aacggcagca ggatgtaggc cggaatccgc caggtccatc gtctggcggc
     1021 ggctttcggg gcaacgtagg tgtcgtccat atgacgcttt tcccggggcg tgcaggttct
     1081 atcgcatggt gcgggccgac ccgacaacct gtcggatggc aggtggttcc gcaccgggaa
     1141 attgcacaac aattgtgcgc ccaacgcaac caaaccggcc cctcgcgatt ttgtgacaca
     1201 tccaatccct gcgtcacgga gaccctcaca tgagcggcat catctacctc gtcggcctcg
     1261 tcgtcgtcgt catggcgatc ctcagcttct tcggcctgcg ttgagcggga aggcaagcac
     1321 catggccctc gacaacctcg tcatcgccgc cgcgccggtc acggccggca cccaggaaca
     1381 tcattcctac ctcgactggc cggccatcat cggcggcatc gtgctggcct cggccatctc
     1441 gatcgtgctg ctggccttcg gctccgccat cggcctgagc tttgccaatt tccgtaccta
     1501 caccggcgtc tcgccggtct gggtcggcat cgccgccgcc agctggctgc tgtgggtcga
     1561 gatctcgagc tttatgtgcg gcggctacct ggccggccgc atgcgccggc gcttccacga
     1621 tgccagcgag cacgaaagcg acgtccgtga cggcgcccac ggcctgctgg tctgggccgg
     1681 cgcgctggtg atcggcgtcg tcctcgccgc cagcggcatc ggcgccgccc tcaccgccat
     1741 cggctcgacc gccgcgaccc tcaccacggc ggcctcgacc gccgccgaca agctcgcctc
     1801 gccgctcgac cccaacgcct acttcgccga cgagctgttc cgcgcgccgg cacctgcggc
     1861 cggtgcaccg gcagcggcag ctcccgctgc caacggcacc gatgttcgcg ccgaggccgg
     1921 ccgcatcctc gcgaccgacg cgacgaccgg cagcatcggc gacgacgaca aggcctatct
     1981 ggcccagctc gtcgccacca acaccggact tccggccgac caggccaagg ctcgcgtcga
     2041 ccaggtgctc gcctcggtcg acaaggcccg gcaggccgcc gccgatgctg ccgaaacggc
     2101 gcgcaagatg accgtgctcg ccgccttcct caccgccgcc tcgctgctga ttgccggcct
     2161 tggcgcctac tgggcggcca tgaagggcgg acgccatcgc gacgaaggca ccatgttcac
     2221 cggcatcttc ggccgctact gatcaggagg taacaatggg aagatcaatt atcctttggc
     2281 tgctcggggt tccgatctgg ctgatcatca tcatcgccct gttcatccac cactgagccg
     2341 gacgacagct acgccaaagg cggccggcaa cggccgcctt tcggctatcc ggccttctgc
     2401 atcggggcga ccggcatgcg gtcgtcctcc ccgctcagca tctgccgcac ctggctggcc
     2461 ggcatcggcc gcgccaccag gaacccctgc gcctcgctgt agccggcggc gtgcacgttg
     2521 cgcagctgct cggccgtctc gacgccctcg gccgtggtgg tgatgcccat gccgtggccg
     2581 atctcggcga tggcgcggac gatggcgagc gcccccgcgg cattgtcgat ggcgcgcacg
     2641 aacgtgccat cgatcttgat cttgtcgaac gggtagctca gcagatagct catcgccgag
     2701 aaccccgttc caaaatcgtc gagcgcgatc ttgaggccca gtgcgtgcag ctggcgcagc
     2761 gcatcgaggt tggacgcgct gttctcgaag aacaccgatt cggtgatctc gatctcgacc
     2821 cgccccggtg ccagcccggc gctgcccagc gcgttcatga tcgtcgccac cacattgcca
     2881 cgctggaact gcaccgacga cacgttgatg gcgacgcgca gcggcgacgg ccagctcgcc
     2941 gcctcggcga tcgcctcgcg cagcacccat tcgccgatcg gcacgatcat cccggtttcc
     3001 tccgccaccg ggacgaagcg cgccggcgac accagcccga gttccgggtg gcgccagcgc
     3061 agcagcgcct cgaagccgga gaacgcctgg gtcttgaggt tgaggatcgg ctggtagtag
     3121 agctcgaact cgccccggcc gagcgccacg ccgaggtcgc gctcgagctg gcggcggtcg
     3181 cgcagcgcct tgtccatcgc tggctcgaag aagcggtagc tgccacggcg atctttcttg
     3241 gccgcataca gcgccagatc ggcgttcttg agcagtgcgt cgggcgtgtc gccatccccc
     3301 ggcgccaccg cgatgccgac gctcagcccg acgtcggtgc gctggccgtc gatgacgaac
     3361 ggctccttgc cggcctcgac cgcccggatg gcgagctggt gcgcatcgcg cgccacgctg
     3421 ccgacatcca tgatcaccgc gaactcgtcg ccgcccatgc gggccgccat gccggcgctg
     3481 ccggtggcga tctcgagccg ccggccgatc tcgcgcagcg cctggtcgcc ggcggcgtgg
     3541 ccgagcgtat cgttgatcgc cttgaagccg tcgaggtcga tcagcagcag cgcaaagctt
     3601 ccgagcccgt ccgccgtcgc gacgttctgc gccagccgtt cctgcagcat gtgccggttc
     3661 ggcaggccag tcagcgcgtc gtggtaggcc cggtgcgcca gctcctcctg caggcggttg
     3721 aactcggtga cgtccttgtg cgtcgaaatc cagccgccgc ccgccagcgg ctgatgcgtc
     3781 acggcgatca cctcgcccga attgagcgtg ttcacctcgg tcgaggcgaa ctggtgctcg
     3841 gccagccgca cccggtcgat gacgtagcgc tcgatgtcgg tcccgatgtg gctgttggcc
     3901 gtgacccgtc cgcgcaggat cgcctcgaag ccggtgccgc ggcgtcccag ccggcggggc
     3961 agccggtaga gcgcgaggaa ccgctcgttg cagaacacca gctgctggtt ctggtcgtag
     4021 atcgagatcg cctgcccggt gctgtcgagc gcttcggcca tgcgccggtt ctgcagcttc
     4081 agcgccttgc ggctggcgct cagttccgcc gtccgttcgg cgatgtcggc ctcgagcccg
     4141 gcctgcagcg catcgagctc ctcgaccatc agcgtgatcg accggtcggt gcgcgtgcgg
     4201 tcctgcacgc tctcctcgta ggcttccgcc accagctcga gcagccggtc gaggtcgacc
     4261 gtgccgtcgg cgcgccgggc cttttcgagc tgcttggcga ggagcttgtg cacctcaggc
     4321 ggccttctcg cgcagcagcg tcaccgtcat cgtctggttg tgcagctgcg cctgtcccgt
     4381 atcgacgtgc ggcgaaatct cgccatacga gtagaacccc accgccgggc agtcggcggg
     4441 cagttcggcc gtcgccgcct cgatctcctc gtcgatccgc tggcccatca gcagccgccg
     4501 gccgatgcag gagacgagga tcgccgcgcc gtcgccgtca gcctccgcgc cgagcgcggt
     4561 tgccgcctgc tgcgtcgccg ccgccgcgcc ggcgcagagc cggctgaagc tgccgcgcat
     4621 caattgtgcc gtccagcctt ccggcatgtc gccggcaaat gtcatcgagc ccgccgccgc
     4681 gtcgaccgac agcacggtgc gcaccacgct ctgcgccgga tggcgcggat cggagatgcg
     4741 catcggaaac agcagcgccg aacccggcag cttctgcgag tcctcggggc cgagatagag
     4801 cttgtagagg tcgagcgccg gcttgccgtc gacgctcagc agcacattgc cgtcggaccg
     4861 ggtgatccgg cgcttcggcc cgaacacgtc ccacccgccg gccgagccgt gcccgaagcg
     4921 gatcgccgcg ccgtaaaagc cgaccgccgc gacgctccgc gccttcggcc ggccgttgca
     4981 tccgaccagc gtctcggcga acgccgcgcc atccccggcc agcccgccgc tcaccggcac
     5041 gtcacgcccc accgcgctcg ccaccccctc gaccagcgcg ctgccgttga cgtgcaggcc
     5101 gtcggacagg atgaagatgc cggcaagatc gggtgccgtg agttgcgcgc cgatcgccgc
     5161 gcccgcgctg tgcgactgcg ccgcgtccgt cacctccgcc gcggcgacgc ggatcggcgt
     5221 ctgggcgaaa tccagcgcca gcacgctcag caggtcgtcg ctcacctcgc cggcggccat
     5281 ctgcccgccg gtcgagcagc cgacgatctg ggcatccggg aagcgtgcgt tgagcgccgc
     5341 aaaggcacgg tccgaggcaa ggaggctgcg gtcgccgaaa tacagcagca ggtcggcgcg
     5401 tccgggctgc tccgggtcgt ccgcccagcc atgcacatcg gtccaggtga gccgcgaagc
     5461 gcgcatcggg ctgtctccga atggccggat ttccggcatt ttccgggccc tgagcctagt
     5521 cctgcgccgt aaagattggg ttagtccgac cgcgcgcttc ttgccgatca gcccttgccg
     5581 cgcagcattc cggcatagag ccccggcttc gatttgggga tttcgagcgc gtcgagccgc
     5641 ttggtataga acgccaccgg tcccggatcg ccgatcaccg cataggcgta gcccgcttcc
     5701 cgcatcgccc gcagcgttgc cgccagcagc gcctcgccga tgccatttcc gcgtgccgcc
     5761 gcgtcgaccc cggtgggccc gaagaagccc ctggcgctgg cgtcgtagca ggcaaagccc
     5821 agcagctccg ggcccttcac tgcgatcagc atggtcggcg gctgctggct cagcgccagc
     5881 gccgcttcgc ccacccaggc cgaagagaac cgcgccgcga tccagtcgag gaccacctcg
     5941 cgctccggcg gcagcgcccg ccgcaccacc acgccgccat cacgcaccgt cgcctcggcg
     6001 gcaaacgccg gcaaatcgta gaggcgcacc aggaggtcgg ccattacatc ccctcgcgct
     6061 ggccataaag gttcggcatc aacccgacga gccccgagaa ccgcgcaaaa tccttgcgct
     6121 cggcgcgcgt ccagccggac tcggcgatcg ccgagagccg cggaaacacc agccggtcga
     6181 acaccgcccg gtcgcccatc ggctcggacc agatgcaggc ctggacgccc atgaatttct
     6241 gcttttcgcc gtcgctccag ccggccaccg gatcgaagcc gtaggtcttt tccggcgacg
     6301 accagccggc ccagccggcc cccggttcat gccactccgc gccattcgcc atgtcgaggt
     6361 agtacgcctg tcccggtgcg accaccaccg gatagccctc cgccgccagc ttctggctgg
     6421 tctcgaccgc cacccagccc acgaggtacg acgacgcctt gtcgatgccg ccgccatgcg
     6481 ccgcttcctc ccaggcgccg gtgatcttgc cccgggcggt gagaaacgcc tgcacccgct
     6541 gcaggaattt cgcctgcagc ggccccgtcc cttcgacccc cagcgaccgc ccgagcgcct
     6601 tggcggcggg cgaggtttgc cacgcgcccg ccggcacctc gtcggcgccg acatggaaat
     6661 accggccggg aaacagctcc accagctcgc cgaagatggt ctcgagcgca ccgtaaaccg
     6721 cgtccacagc cgggttgagg cagttgttgg gaaagctctg gatcgaggcg tacggcccgt
     6781 tctcgccgac gtcgcgcagc tcgggcagcg ccgccagcag cgcgtagcag tggcccggca
     6841 cgtcgatctc tggaatcacc tcgatgccga agcggcccgc cagcgccacc agcgtccgca
     6901 cgtcggcctg ggtgtagacg ccgcccgatt tctccggccc gctgcccagc agcggcggca
     6961 gcgccagccc gtatccgcgc cacgccccga tttcggtgag ccgcggatag gccgcgatct
     7021 cgacccgcca cgcttcgtcg tcgctgaggt gccagtgaaa gcggttgagc ttgttccagg
     7081 cgagcagcgc caggaagcgc gagatttcgg cggtgccgta gaaccgtcgc gccacgtcga
     7141 gatggcagcc gcgaaacccc atcgccgggc tgtcctcgat gctgccggcc accggaaagc
     7201 tgaaccgctc gcgctcgagc cgcgccccgc gcagcatctg cccgaggctg atgaggccgt
     7261 agaggaagcc cgtggcgctc gccgcctcga gcttggcccc atgtgcgaaa aagccgagcc
     7321 gataggcctc cggcccgagc ccgctgtcct cgaccagcat caccggcagc ccgtcctcgc
     7381 gcgccggacg cagcagtcct tcgcccggaa acagcagtgc cacgagctcg gcgaatgcgt
     7441 ccttcgccgc cgccgccgac cgcgcgccgc cagtggcgat gtcgagcccc tgtggcgggc
     7501 tgcgccggcc gctgaccgcg acgctgttgg gccacggcac gatcgacacc gccgcgtccg
     7561 cctctgccgc gagccgcatg gtgccgcggc ggtacggcgc gctgcccgcc tgctcggtcg
     7621 gcagcgtgac ggccgggagg gtgcggccgt cgccgaggat gacgaacccg gccgccacgc
     7681 cgtcggtcca gtgccgcagc ggaaagtcga gctggcggat gccgatttcc cactcggcgc
     7741 cgggcgccag cacgaagccg gccggcggcg ccagttcggc gtagttggag agctgcgtga
     7801 cgatgtggcc gttgctggtt tcggcaccgg cggtgatccg cacctggccg gaaatcccga
     7861 gccggaaatt ggcgatcgaa tccttgccgc ggttggcgag gatcagccgg tagcggccgc
     7921 cgctttcgcc cggctcccag atgctccgca gcacgaagcc gtcgcgccga tccaccgcca
     7981 tcgccgatcc cctcgcgcgg cttctagtcg acgcgtccgc gggccgcaac cggcaccact
     8041 tcgacctcgc cattgccgcc gacgacgttc accacgtcgt agaggttcga caccacgcag
     8101 caatggttgg gaatgatgcg gaggcgctcg cccacccgcg gccagtcgga cgccgccggc
     8161 aggacgatca ccccgtgctc ctcgctgagg ttgtcgatca cgatgtcctc gtgcccctgc
     8221 accacgccat agccggtctg gccgaacagg tcgctcgtca gcgccttcga gccggcatcg
     8281 atgatcgccc gggtcggcgt cggccgcgac accacggtgg cgagcaccgt cagcgcacag
     8341 tcggcatacg ccgccgcccc gaacgacacc tgggcgcggt cgtagtagat gtaggttccc
     8401 ggccgccgct cggtgatcac cgtcggcccg gtgtgccaca tgtcggggct gttgcccgac
     8461 gtcaccatcg gcaccgcgat cccggcggct tcgatcgtcg ccttggcctc ggccatccac
     8521 tggtccatgg cggcgtagtc gccgcgcttg gcgtaggtca tgatgccgcc gaagcgcagc
     8581 ccgggcgcca tttcgatctg ccgcgccagc gccagcgcct gtgccggcga ctgcacgccg
     8641 cagcggccgc cgccgctgtc gcattcgacc aggacggtca gcggccggcc ggcgtcggca
     8701 aaggtcgcgg cgtagccggc gacggtgtcg ggactgtccg ccgttacgct cagcgtcacc
     8761 cgctcgttga gcgcccgcag ccgcttgagc ttcgccgtgc cgacgatgtt gtagggcacg
     8821 aagatgtcgc tgagcccggc atccgccatc acctcggcct cgcccacctt ctgcaccgtg
     8881 atccctttcg cccccagtgc cacctggcgc tgcgcgaaac gcgggatctt gtgcgtcttg
     8941 atgtgcggcc ggagcctgta tccgttggcg tcggcatggg cctgcgcgcg ctgcagattg
     9001 gcctcgacgc gggtgaggtc gatcaccacg caaggcgtgt cgaggtcggc gatttcagtc
     9061 atccgggtct ccctgtcggg gcgacttatc cccggtcgat ggcggcagtc tagactcgtc
     9121 gcgagttgaa cgttcgaggc gacatcagat gtccgagacc gcccgcctgt cgctgcccta
     9181 catcgccccg cagcaggcgc aaaagcaagt cacctacaac accgccatgg cggctctcga
     9241 ccagctggtg cagccagtgg tcaagagccg caccaccacg tcgccgcccg gcagcccggc
     9301 cgagggcgat acctatatcg tcgccccctc ggccaccggc ggctgggccg gcgccgacgg
     9361 caagttcgcc gcctggctga gcggcgcctg gagcttcacc acgccggccg acggctggct
     9421 ggcctatgtg ctcgacgccg ccgagcttgc cgtccacgcc tccggtgcct ggtcgagctt
     9481 cgtcaccacc ggcggcacct cgctcgccaa gctcggcatc aacaccaccg ccgacctcac
     9541 caaccggctg gccgtcgccg ccacgtcgag cctgttcacc cacgtcgggg ccggtcatcg
     9601 tctcgcgctc aacaaggcta ccgccgccga taccgccagc ctgctgctcg aggacaatct
     9661 gtcgggccgc gccgagatcg gcctgaccgc cgacgacgcc ttgcacgtga aggtctcgcc
     9721 caacggctcg agctgggtcg aagccctcaa catcgcgcag gcctccgggc tggtgagcct
     9781 gccgatcggc cagctcgcct tcccggcgac gcagaacccg tcgtcgagcc ccaacgtgct
     9841 cgatgactac gaggagggca cctggacgcc ggtgctgcag ttctccggcg cctcgaccgg
     9901 catcgcctac ggcacgccca cccttggccg ctacaccaag atcggccgcg ccgtgttcct
     9961 caccgccgcc gtcaccctca ccagcaaggg ctccgccacc ggctccgcgc agatcagcgg
    10021 cttgcccttc agcaccgtca acgacgcgct gctcaactcc tgcacggtcg gcttcgcctc
    10081 ggccatgagc accgtcaccg gcgccgtgct gatgatgatc caggccaacg ccacccgcat
    10141 caacatctac cattccaaca acggggccgc ggccgccctg accaattcca atttcggcgc
    10201 caccagctcg ctctatttca gcgccgccta cgataccgtg tgatgccgcg gcgaagcggg
    10261 ggcttttcac gcccccgccg agcggctagg ccttccgggc cttttccagc acccggaccc
    10321 gccatgcccg cctcgccgat cgatcccgcc aaactcgaca agctcgccga aatcgccatc
    10381 cgcgtcggcc tcggcctcgc cccggggcag gacctctaca tgaccgcgcc caccggcgcg
    10441 ctgccgctgg cccgccgcat cgccgccgcc gcctaccggg ccggcgccgg gctggtcacc
    10501 accaattttt ccgacgagga aatgaccctc gcgcgcttcc gcaatgccgg cgaccagagc
    10561 ttcgaccgcg ccgccgactg gctgttcgag ggcgtcgcca aggccttcga tgccaacacc
    10621 gcgcggctcg ccatctccgg tgacaacccc atgctgctgg ccgccgagga ccccgacaag
    10681 gtcgggcgcg ccaaccgcgc caccgccaag gcctacaagc cggcgcagac ccgcatcgtc
    10741 aatttcgaca tcaactggac catcgtgccg ttccccggca cctcgtgggc gaaggaagtg
    10801 ttcccgggcg tgcccgacga cgtcgccgtc gaaaagctcg ccgacgccat cttcgccgcg
    10861 acccgcgtcg atacccccga cccgatcgcc gcctgggctg cccacaatgg ccggctcaag
    10921 gagcggcagg actggctgac cgcccgcgat ttccgcgccc tcaaatacac cggcccgggc
    10981 accgacctga cgctcgggct cgccgacggc cacgcctgga agggcggcgc cagcaaggcc
    11041 cgcaacggca tcgtctgcaa tcccaacatc ccgaccgagg aagtgttcac gacgccccac
    11101 cggctgcgcg tcgatggccg cgtccgctcc accaagccgc tgagccacaa cggcaccctg
    11161 atcgagggca tcgaggtgcg tttcgaggcg ggccggatcg tcgaagtcca cgcccgccgc
    11221 ggcgaggatg tgctggtcaa ggcgatggac accgacgagg gcggccggcg cctcggcgag
    11281 gtggcgctgg tgccccattc ctccccgatc agcgccagcg gtatcctgtt ctacaacacc
    11341 ctgttcgacg aaaacgcctc gagccacatc gcgctcggcc agtgctactc gaaatgcttc
    11401 cgcaacggcg acaccatcac ccccgaggaa gtcgagcagc gcggcggtaa caagagcttc
    11461 atccacatcg actggatgat cggctcggcc gagatcgacg tcgacggcat cggccaggac
    11521 ggctcgctca cccccgtgat gcgcaagggc gagtgggcct gagccggccc ggtctcctgc
    11581 cttcccacgc gcggcctgcc gtcccgaacc cctgccattg agtttgttgc aacgttgcaa
    11641 taagctcctt cccgaggccg gtccgggcgc gaaatcatca ggttgcgcaa tggattaggc
    11701 gcacctgtcg ggaaaaacag agggtaagat ggcgttgaac gtgtcgcagc ggctcgagcg
    11761 gctgaaggtg cggatcgagg agctgaaata ctggcgcgcc cgcgccggcg tggtggtgga
    11821 cggctggacc gtcgacggcg cgccgatcgc catcggcggc gcctggccgt cgcgcgacgg
    11881 cgtccgcaaa ttcgccgcca ccgccgaggt gccggcgcac tggccgctcg aggaaacccg
    11941 cctgttcctc gatctcggcg gcgaaggcct cgcgaccctg agttacccca accgccacgc
    12001 cgcctcgttc ggcgtcgacc cctaccaccg cgaattcccg ctgcagcacc ggcaggtcgc
    12061 gatcaccgcc gaggccaccg cccgcgagcc gttcggcgtg ccggtgcgca atccgcacct
    12121 caaccgcgcc gtgctgcagt ggatcgacgg tcccgtccac cgcttccatc tgctgctgcg
    12181 ccagatcgcc gaggcggtct ccgtcctcgg cagccatgag gtcgtgccgc acctgcttac
    12241 cgccgccgag gacgcccagc gcagcctcga ctggccgtcc gacaccgccg actatctcgc
    12301 gcgcatggcg ccgagcccgc agcagcagca gatctggcag ctgccgccgc tgatcgacac
    12361 gccggccgcc ctcgaccagg gccagcgcgc cagcgtcgct gccgcccacg acgcgctggt
    12421 cgagaccctc cgcgccctca aggagcgctt cccgccgcag ggcgaattgc tgctcaccgg
    12481 ccacgcccac atcgacctct gctggctctg gccctacgac gaaacgcgcc gcaagatgcg
    12541 ccgcaccttc cacaccgccc tcgggctgat ggaggcctcc gacgatttcc gcttcaacca
    12601 gtccacggcg caatattacg cgcagatcga acaggacgat ccggcgctgc tcaaggccat
    12661 caaggcccgg gtcaagtccg gccagtggga aaccatcggc ggcatgtggg tcgaaccgga
    12721 taccaacatg ccgaccggcg agtcgctggt ccgccagatc ctctacggcc agctctattt
    12781 cgagcggcag ttcggctctc gccacaccgt ctgctggctc cccgactgct tcggcttctc
    12841 cggcgcgctg ccgcagctgc tccgccaggg cggcatcgag agcttcttca ccctcaaggt
    12901 caactggtcc gagacgaaca ggattccagc cgatcttttc tggtgggagg gcctcgacgg
    12961 cagccgcgtg ctgacccaca ccttcgacaa cccgatgcac ggctacaacg gcttcgtgca
    13021 gcccgactgc tatgtgccga cctggcagaa tttccgcggc aagacgcagc acgatacctc
    13081 gctgctggcc gtcggctacg gcgatggcgg cggcggcacc acgcccgaga tggtggagcg
    13141 cgaggtccag ctgcgcgact ttcccgccat tccgcaggcc cgctggggcc gggtcgccga
    13201 tttcttcgat cgtgcccatg cgcgggcgaa acaggtcgag ctgccggtct ggaccggcga
    13261 gatctacctc gagctgcatc gcgccacgct caccacccag tccggcatca agcgcatgca
    13321 ccggcacgcc gagcgcgcgc tgatcactgc cgagaccgcc gcgtcgctgg cccatatgct
    13381 cggcgccgcg gcgccgaaaa gcctcgagga ccactggcgt tacgtgttga agaacgagtt
    13441 ccacgac
//
LOCUS       DATAZA010000047         4303 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_351021, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000047 DATAZA010000000
VERSION     DATAZA010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4303
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_351021"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..384)
                     /locus_tag="VHZ56_01220"
     CDS             complement(<1..384)
                     /locus_tag="VHZ56_01220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEX4296619.1"
                     /translation="MAKRDYYDVLGVPKGSDEAALKGAYRKLAMQLHPDRNPGNADAE
                     HQFKEINEAYDTLKDPQKRAAYDRFGHAAFEQGGMGRAGAGAAGFGPEFSSSMSDIFE
                     DIFGDFMGGAGGRRGGAQQSRLRGSD"
     gene            complement(643..2550)
                     /gene="dnaK"
                     /locus_tag="VHZ56_01225"
     CDS             complement(643..2550)
                     /gene="dnaK"
                     /locus_tag="VHZ56_01225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041594641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEX4296620.1"
                     /translation="MAKVIGIDLGTTNSCVAVMEGSTYKVIENSEGARTTPSMVGFTK
                     DGERLVGQPAKRQAVTNPEGTLFAVKRLMGRRYDDPMVGKDKGLVPFKIIKADNGDAW
                     VEVDGKKYSPSEVSAMILTKMKETAEAYLGEKVAQAVITVPAYFNDSQRQATKDAGKI
                     AGLDVLRIINEPTAAALAYGLDKKNTGTIAVYDLGGGTFDISVLEIGDGVFEVKSTNG
                     DTFLGGEDFDMRLVDFLADEFKKDQGIDLRKDKLALQRLKEAAEKAKIELSSATQTEI
                     NLPFITADASGPKHLTMKLTRARFEQLVDDLIQKTVEPCRQAIKDAGVSLSQIDEVVL
                     VGGMTRMPKVVETVKAFFGKEPHKGVNPDEVVAAGAAIQAGVLQGDVKDVLLLDVTPL
                     SLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAEDNQSAVTIRVFQGEREMAANNKLLG
                     NFDLAGIPPAPRGVPQIEVTFDIDANGIVNVSAKDKGTGKEQQIRIQASGGLSDADID
                     RMVKEAEANAATDKQKREAVEARNQAESLIHSTEKSLKDYGDKVGADEKSAIETALAD
                     LKGVIDGEDAETIKEKTNALAEASMKLGEAMYKASQAEAEAKAAGNAKPAEDDVVDAD
                     FEEVKDDKKSA"
     gene            2850..3302
                     /locus_tag="VHZ56_01230"
     CDS             2850..3302
                     /locus_tag="VHZ56_01230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296621.1"
                     /translation="MNRLLPALAAVSALLLTTGAFAQTAPDTAAEQMWCGTALTVAFA
                     SAPSDATSDQMAQAQTYIDGGNAMIATATQAYLNAGFTEEQVTKVKTDLVAEVTPIVT
                     GAADPSKAKYTFDQCAGLLPGASSQAPDASAPADDTSSAPADASSSAQ"
     gene            3314..3940
                     /locus_tag="VHZ56_01235"
     CDS             3314..3940
                     /locus_tag="VHZ56_01235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HEX4296622.1"
                     /translation="MRLGAADALVVVDLQYDFLPGGRLAVAGGDEIIGPVNALAGRFA
                     NVLQTQDWHPAGHVSFASSHPGRQPFDSIERPYGPQVLWPDHCVIGSRGAEFAETLQL
                     PQVQAVIRKGFRAGIDSYSAFRENDHATPTGLAGYLRERGLRRLFLCGLATDFCVAWT
                     AEDAIAAGFEAVVIEDATRAIDANGSLAAAWARMNAAGVGRVQVSELI"
     gene            complement(3944..>4303)
                     /gene="grpE"
                     /locus_tag="VHZ56_01240"
     CDS             complement(3944..>4303)
                     /gene="grpE"
                     /locus_tag="VHZ56_01240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEX4296623.1"
                     /translation="TDSLSRALLVLPPEARDTADGPMKSLIDGIDLTEREMQRLLAVH
                     GVKPIEAEGQKFDPHKHQAMFEVPDPTRPEGTVVQVVQAGYAIGDRVLRPAMVGIAKG
                     GGPAPAPQGESHIDKNA"
BASE COUNT          576 a         1536 c         1363 g          828 t
ORIGIN      
        1 atccgagccg cgcagccggc tctgctgcgc gccgccgcgc cggccaccgg cgccgcccat
       61 gaagtcgccg aagatgtcct cgaagatgtc cgacatcgac gagctgaatt ccggcccgaa
      121 cccggccgcg cctgccccgg cgcgacccat gccgccctgc tcgaacgccg cgtggccgaa
      181 gcggtcgtag gcggcgcgct tctgcgggtc cttcagcgtg tcgtaggctt cgttgatttc
      241 cttgaactgg tgctcggcgt cggcgttgcc cggattgcgg tcgggatgca gctgcatggc
      301 gagcttgcga taggcgcctt tcagcgccgc ttcgtccgag cccttgggca cgcccagcac
      361 gtcgtagtag tcacgcttgg ccaattagct tgccccacgc tctggccgac cggacccaac
      421 agggtccgtt tggccaatcg ctttgggaac cccggcgtgt gccccacgct ctggccgacc
      481 ggccgggtga ccgtcggttc gtccaaccgc tctggggacc ccggtcccga ctgtgattct
      541 gtcgatcatg cctgtcgcca accgccgaac ggtctaccct aaaatgaagg cgccgcggga
      601 ggacccgcag cgccctttgc tatgcgctcg aactcgcgat catcaggccg acttcttgtc
      661 gtccttcact tcctcgaaat cggcgtcgac gacgtcgtcc tcggccggct tggcattgcc
      721 cgcggccttg gcttccgcct cggcctggct ggccttgtac atcgcctcgc cgagcttcat
      781 cgaggcttcg gcgagggcgt tggtcttttc cttgatcgtt tcggcgtcct cgccgtcgat
      841 cacgcccttg aggtccgcca gcgccgtctc gatggcgctc ttttcgtcgg cgccgacctt
      901 gtcgccatag tccttgagcg acttctcggt cgagtggatc aggctctcgg cctggttcct
      961 ggcctccacc gcctcgcgct tctgcttgtc ggtcgcggcg ttcgcctcgg cttccttgac
     1021 catccggtcg atgtcggcgt cgctgaggcc acccgaagcc tggatgcgga tctgctgctc
     1081 cttgccggtg cccttgtcct tggccgagac gttgacgatg ccgttggcgt cgatgtcgaa
     1141 cgtcacctcg atctgcggca cgccgcgcgg cgccggcgga atgccggcga gatcgaaatt
     1201 gcccaggagc ttgttgttgg ccgccatctc gcgctcgccc tggaacaccc ggatggtcac
     1261 cgcgctctgg ttgtcctcgg cggtcgagaa cacctggctc ttcttggtcg ggatcgtggt
     1321 gttgcggtcg atcagccggg tgaacacgcc gcccagcgtc tcgatgccga ggctcagcgg
     1381 cgtcacgtcg agcagcagca cgtccttgac gtcgccctgc agcacgcccg cctggatggc
     1441 ggcgccggcc gccacgacct cgtccggatt gacgcccttg tgcggctcct tgccgaagaa
     1501 cgccttcacc gtctcgacca ccttgggcat gcgcgtcatg ccgccgacca gcacgacctc
     1561 gtcgatctgg ctcagcgaca cgccggcgtc cttgatcgcc tgccggcagg gctcgacggt
     1621 cttctggatc aggtcgtcca ccagctgctc gaagcgggcg cgggtgagct tcatggtgag
     1681 gtgcttggga cccgaggcgt cagccgtgat gaacggcagg ttgatctcgg tctgcgtcgc
     1741 cgagctcagc tcgatcttgg ccttttcggc ggcttccttg agccgctgca gcgccagctt
     1801 gtccttgcgc aggtcgatgc cctggtcctt cttgaactcg tcggccagaa agtcgaccag
     1861 ccgcatgtcg aaatcttcgc cgccgaggaa ggtgtcgccg ttcgtcgact tcacctcgaa
     1921 cacgccgtcg ccgatctcca gcaccgagat gtcgaaggtg ccgccgccga ggtcatagac
     1981 cgcgatggtg ccggtgttct tcttgtcgag cccgtaggcg agcgctgccg ccgtcggctc
     2041 gttgatgatg cgcagcacgt cgagcccggc gatcttgccg gcgtccttgg tggcctggcg
     2101 ctgcgaatcg ttgaagtagg ccggcacggt gatcaccgcc tgcgccacct tctcgccgag
     2161 atacgcctcg gcggtttcct tcatcttggt gaggatcatc gccgacactt ccgacggcga
     2221 atatttcttg ccgtcgacct cgacccaggc gtcgccattg tcggccttga tgatcttgaa
     2281 gggcaccagg cccttgtcct tgccgaccat cgggtcgtcg tagcgccggc ccatcagccg
     2341 cttcacggcg aacagggtgc cttccgggtt ggtcaccgcc tggcgcttgg ccggctggcc
     2401 gacgagccgc tcgccgtcct tggtgaagcc caccatcgag ggcgtcgtgc gggcgccctc
     2461 ggaattctcg atcaccttgt aggtcgaccc ttccatcacc gccacgcagg aattggtggt
     2521 gccgaggtcg atcccgataa ctttagccat cacttgcctc tttcctaagc gaacccggaa
     2581 ccgaactcca tgagacttcg gcagttcgtg cgaccctgat gagggaccgg gttcctcgct
     2641 gaatttggga tttgagtccg tcgccggacc cctggcggct atataggggc ggggttttgg
     2701 gcctgcaagc gccgcggccc tattttccgg ggctttgcga cccgtcacgc cgcggtcacg
     2761 tttagcggct tgaagcgttg ccccgcacgc ccttccttgg cgcgcccgcg ccgatatgct
     2821 aactcgcccc tgcaacagga acccttgcca tgaacaggct tctcccggcc cttgcggccg
     2881 tctccgcgct cctcctgacc accggcgcct tcgcccagac ggctcccgac acggcggccg
     2941 agcagatgtg gtgcggcacg gcactgaccg tcgccttcgc cagcgccccg tccgacgcga
     3001 catccgacca gatggcgcag gcccagacct atatcgatgg cggcaacgcg atgatcgcca
     3061 cggcgacgca ggcctacctc aatgccggct tcaccgagga gcaggtgacc aaggtcaaga
     3121 ccgatctcgt cgccgaggtc accccgatcg tcaccggcgc cgccgatccc tcgaaggcca
     3181 agtacacctt cgaccagtgc gccggcctgc tgccgggcgc ctcctcgcag gcgcccgatg
     3241 catcggcacc ggccgacgac acctcctccg ctccggccga cgcctcgtcc tcggcgcagt
     3301 agccgcgccg ccgatgcgtc tgggggctgc ggacgcgctg gtcgtcgtcg acctgcaata
     3361 tgacttcctc cccggcggcc ggcttgccgt cgccgggggc gacgagatca ttgggccggt
     3421 gaacgccctc gccgggcgct tcgccaacgt cctgcagacg caggactggc atccggcggg
     3481 gcacgtctcg tttgcctcga gccaccccgg ccggcagccc ttcgacagca tcgagcggcc
     3541 ctatgggccg caggtgctgt ggcccgacca ctgcgtcatc ggcagccgcg gcgccgaatt
     3601 tgccgaaacg ctgcaactgc cgcaggtgca ggcggtgatc cgcaagggct tccgggccgg
     3661 catcgattcc tattcggcct tccgcgagaa cgaccacgcg accccgaccg ggctcgccgg
     3721 atatctgcgc gaacgcggcc tccgccggct gttcctgtgc ggcctcgcca ccgatttctg
     3781 cgtcgcctgg accgccgagg atgccatcgc cgccggcttc gaggcggtgg tcatcgagga
     3841 cgccacccgc gccatcgacg ccaatggctc gctggctgcc gcctgggccc ggatgaatgc
     3901 cgccggggtc gggcgcgtac aggtcagtga gttgatctag cgactaggcg ttcttgtcga
     3961 tgtggctttc gccctgcggg gcgggggcgg ggccgccgcc cttggcgatg ccgaccatcg
     4021 ccggccgcag cacccggtcg ccgatggcgt agccggcctg caccacctgc accaccgtgc
     4081 cctccggccg cgtcggatcg gggacctcga acatcgcctg gtgcttgtgc ggatcgaatt
     4141 tctggccctc ggcctcgatc ggcttgacgc cgtggaccgc cagcagccgc tgcatttcgc
     4201 gctcggtcag gtcgatgccg tcgatcagcg acttcatcgg gccgtcggcg gtgtcgcggg
     4261 cttcgggcgg cagcaccagc agcgcccggc tcagcgagtc ggt
//
LOCUS       DATAZA010000048         2645 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1744095, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000048 DATAZA010000000
VERSION     DATAZA010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2645
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1744095"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..953)
                     /gene="cobW"
                     /locus_tag="VHZ56_01245"
     CDS             complement(<1..953)
                     /gene="cobW"
                     /locus_tag="VHZ56_01245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014133059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein CobW"
                     /protein_id="HEX4296624.1"
                     /translation="MDKIPVTVITGFLGAGKTTLVRHLLAHAKGKRIALIINEFGELG
                     VDREVIAADGHDNCRAEDMIELSNGCICCTVAEDFIPTMETLLGRDDKPDHIVIETSG
                     LALPQPLIRAFNWPEIKSQVTVDGVVTVVDAAALSEGRFAADEAAVARQRAADTMLDH
                     ATPLGELFKDQLVAADLVVVNKTDLVADGALGEVEARLRAEVRPGTGMVRARQGHVDI
                     AALLGMGIGSEDHLEGRDSAHELEHGGAGHEHDDFDSFAVTLPGVTDRGDLLAAIEAT
                     IRAHDVLRLKGWAALPGSDARLAIQAVGPRVNAWFDRPWKPG"
     regulatory      complement(992..1206)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            1353..2603
                     /locus_tag="VHZ56_01250"
     CDS             1353..2603
                     /locus_tag="VHZ56_01250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic transporter"
                     /protein_id="HEX4296625.1"
                     /translation="MTLTILAWLVVAAAVAGVITRPFRWPEYIWAVAGALAVVLLGTV
                     SPSDALAAAGRGTDVYLFLLGMMLLSELARQEGLFDYLARHAVRLSRGSPVRLFAIVY
                     AVGTLVTVFMSNDATAVVLTPAVAAATRTAKVAPLPYLLVCAFIANAASFVLPISNPA
                     NLVLYGDHMPPLLTWIGRFALPSLLSIGATFVALRLSQRRDLAGVVDAAAEPAPLSHG
                     ARLVAIGLAATAIVLLVASSLGWPLGLPTFACGVVVAATTLLVSRRAPWPVLRHISWG
                     VLPLVAGLFILVEALDRTGVIGRLGDLLKAAAASSVPWTAAVAGLAVAIGTNLVNNLP
                     LGLVAASASHAAAVPVPVTNALLVGIDLGPNLSVTGSLATILWLIALRREGIDIGAWR
                     FLRVGVVVMLPALVLALGAVLLLA"
BASE COUNT          299 a         1076 c          791 g          479 t
ORIGIN      
        1 cccggcttcc acggccggtc gaaccacgca ttgacccgcg gccccaccgc ctggatggcg
       61 agccgcgcgt cgctgccggg cagggcggcc cagcccttca gccgcagcac gtcatgggcc
      121 cggatcgtcg cttcgatcgc cgccagcagg tcgccgcggt ccgtcacccc cggcagcgtc
      181 accgcgaacg aatcgaaatc gtcgtgctcg tgcccggcgc cgccatgctc gagctcatgc
      241 gcgctgtcgc ggccctcgag atggtcctcg ctgccgatcc ccattcccag cagcgccgcg
      301 atgtcgacgt ggccctgccg cgcccgcacc atgccggtgc cgggccgcac ttccgcccgc
      361 agccgcgcct cgacctcgcc cagcgcaccg tccgccacga ggtcggtctt gttgaccacc
      421 accaggtcgg ccgccaccag ctggtccttg aacaattcgc ccagcggcgt cgcgtggtcg
      481 agcatcgtgt ccgccgcgcg ctgccgtgcc accgccgcct cgtcggccgc gaaccggcct
      541 tcgctcagcg ccgccgcgtc caccaccgtc accacgccgt cgaccgtcac ctggctcttg
      601 atctcgggcc agttgaaggc gcggatcagc ggttgcggca acgccagtcc gctggtctcg
      661 atgacgatgt ggtcgggctt gtcgtcgcgc cccagcagcg tctccatcgt cgggatgaag
      721 tcctccgcca ccgtgcagca gatgcagccg ttcgagagct cgatcatgtc ctcggcgcgg
      781 caattgtcgt gcccgtccgc cgcgatcacc tcgcggtcca cccccagctc gccgaactcg
      841 ttgatgatca gcgcgatgcg cttgcccttg gcgtgcgcca gcaggtgccg caccagcgtc
      901 gtcttgccgg cgccgagaaa gccggtgatc accgtgaccg ggatcttgtc catgtgcaaa
      961 caccctccgt gcgcaccgtg agaaatgagc tcttcgctcg cctggtgctg gcaggtctcc
     1021 tggctcgcgg gtcgtcgtgg tgtccggcct tcccggcgaa tatctcgcca gtggcagttc
     1081 ggatcactcg ccgcttacag ttgcgggggc agccacggca tcggtccctg atgggtacgc
     1141 ctcaccgtgt tcccttttga tccccatcgc ccttcggccg ggggaaccag cccgcgatca
     1201 gtgtcacgaa agccccgctc gcgcaatcgg cccactgccg ggccggcgcg aggccgcatt
     1261 tttcgcttgc cctcggggcc tcggcgagga acacaggcgg ccgctcgaca cttgccgaag
     1321 acctgcccgc caccttctcc ggcaccccat tcatgacgct caccatcctc gcctggctcg
     1381 tcgttgccgc cgccgtcgcc ggcgtcatca cccggccgtt ccgctggccc gaatatatct
     1441 gggccgtcgc cggcgcgctc gccgtcgtgc tcctcggcac cgtctcgccg tccgatgcgc
     1501 ttgccgccgc cggccgcggc accgacgtct atctcttctt gctcggcatg atgctgctct
     1561 ccgagctcgc ccggcaggaa ggcctcttcg actatctggc gcgccatgcg gtgcggctgt
     1621 cgcgcggctc gccggtgcgg ctcttcgcca tcgtctatgc cgtcggcacg ctggtcaccg
     1681 tcttcatgtc caacgacgcc accgccgtcg tcctcacccc ggccgtcgcc gccgccaccc
     1741 gcacggcaaa ggtcgcgccg ctcccctacc tcttggtctg cgccttcatc gccaatgccg
     1801 cgagcttcgt gctgcccatc tccaatcccg ccaatctcgt gctctacggc gaccacatgc
     1861 cgccgctgct cacctggatc ggccgcttcg cgctgccctc gctgctgtcg atcggcgcca
     1921 ccttcgtcgc cttgcgcctc agccagcggc gcgatctcgc gggtgtcgtc gatgccgccg
     1981 cggagccggc tccgctcagc cacggcgccc gcctcgtcgc catcggcctc gccgccacgg
     2041 caatcgtcct gctcgtcgcc tcgagcctcg gctggccgct cggcctgccc accttcgcct
     2101 gcggcgtcgt cgtcgccgcc acgacgctcc tcgtctcgcg ccgtgccccg tggccggtgc
     2161 tccggcacat ctcgtggggc gtgctgccgc tggtcgccgg cctcttcatc ctcgtcgaag
     2221 cgctcgaccg caccggtgtc atcggccgcc tcggcgatct gctcaaggcc gccgccgcca
     2281 gctccgtccc ctggaccgcg gcggtcgccg gcctcgccgt cgccatcggc accaatctcg
     2341 tcaacaattt gccgctcggc ctcgtcgccg cctcggccag tcacgccgcc gccgttcccg
     2401 tccccgtcac caatgcgctg ctggtcggca tcgatctcgg gcctaacctc tcggtcaccg
     2461 gctcgctcgc caccatcctc tggctgatcg cactccgccg cgaaggcatc gacatcggcg
     2521 cctggcgctt cctcagggtc ggcgtcgtgg tcatgctgcc ggcgctcgtc ctggcgctgg
     2581 gcgcggtcct gctcctcgcc tagtgcgagc agtcggtgct ggtgcccgcg acctgcagcg
     2641 atttg
//
LOCUS       DATAZA010000049         5611 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1048011, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000049 DATAZA010000000
VERSION     DATAZA010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5611
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1048011"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..418
                     /locus_tag="VHZ56_01255"
     CDS             <1..418
                     /locus_tag="VHZ56_01255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003611257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296626.1"
                     /translation="QLNPNSRHHLAFNLGYPNAYDLALGRTGSAIMVHGGCSSVGCFA
                     MTDAGIDEIYGVVEAALRAGQAAIDVAVFPFELTETTLQAESGSRWAPFWANLKQGAD
                     LFAASGLPPAVAVAQDAYVFGAAARADACTPISGWV"
     gene            418..1260
                     /locus_tag="VHZ56_01260"
     CDS             418..1260
                     /locus_tag="VHZ56_01260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296627.1"
                     /translation="MDRVISLLAALVGLIALGGAILVHTNVDAERQQMASDIAQMRLS
                     IGLMSQQQAPAVAVAEAAPAAPLLAPSSMPPAAASSSAAPEALPVPTPLVAAAAAPAP
                     ATASSEDETTVAELQTLRARVSALEEANADQASQLQVAQASLATEATASVAAASAASA
                     VAAEGASVQPAVSTADAAAAVAPAGSAASAVPAAIVADGPTKDCIPLGTRFMAASGDS
                     FPICRTKTVIKVSDVTDGQATIDGAGPVVAGGFGRLGFNGCTVMVFSADPVSGYAEMR
                     VTCD"
     gene            complement(1331..4090)
                     /gene="secA"
                     /locus_tag="VHZ56_01265"
     CDS             complement(1331..4090)
                     /gene="secA"
                     /locus_tag="VHZ56_01265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEX4296628.1"
                     /translation="MVLAAIAKAIFGSANDRQVRKYQPKVDAINALEPEMAKLTDAEL
                     RAKTDEFKAQVAAGTSLDDMIVPAFAAVREASRRALGMRHFDVQLVGGMVLNDRSIAE
                     MRTGEGKTLVATLPVYLNALTGKGVHVVTVNDYLARRDSEWMGQIYKFLGLTVGIIVH
                     GLDDIERKASYACDVTYGTNNEYGFDYLRDNMKYSRDQMVQRGHAFAIVDEVDSILVD
                     EARTPLIISGPTDDRSDLYTSVDELMQQIGAEDFDHDEKQRSVTFTEGGTEKLENLLR
                     DAGLLKAESLYDIENVNLVHHANSALRAHKMFSKDKDYIVRNDEVVIIDEFTGRMMPG
                     RRYSEGLHQALEAKEHVKIQPENQTLASITFQNYFRLYKKLSGMTGTAATEAEEFSNI
                     YNLNVVTVPTNVTVVRIDDDDAIFRTAEEKFEEISSVIEDCKKRGQPVLVGTTSIEKS
                     EMLADLLRTKKGINDLQVLNARYHEQEAHIIADAGIPGAVTIATNMAGRGTDIQLGGN
                     LDMRIERDAAGLEGAEREQKITEIKARIAADKEKALAAGGLMVIGTERHESRRIDNQL
                     RGRSGRQGDPGHSKFFLSLQDDLMRIFPVESMDSMLGKLGLEQGESITHPWVTKAIER
                     AQGRVEARNFDIRKNILKYDDVMNDQRKVIFEQRLELMDKEDVAETIGDMRHDVIDAL
                     VARAIPDRSYPEQWKTDELDAEARQFLNLDVRTRPWAEEEGIDAEIVRERLGKLADEA
                     AAAQIAKYTPDIMRQVEKSLLLQSIDGLWREHLVTLDHLSKVVGWRGLAQRDPLNEYK
                     QEAYELFQKLLTDMREQVITQLSHIQIEMRQPAPPPVLDLGRVSEIHIDPTSGENDAA
                     SDYTGTIGGAFAAAGALAGLGGDVAEADPRLRPIDPKLLVGVSRNAPCPCGSGKKFKH
                     CHGSF"
     gene            4304..5275
                     /locus_tag="VHZ56_01270"
     CDS             4304..5275
                     /locus_tag="VHZ56_01270"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX4296629.1"
                     /translation="MTSYILRGKLPGFLKFLLLALVALTLAGLPFAVSAQDSSSASQP
                     AATDQAQASSSAEPAAPAQPDPKAVVATVGGQDITEADLSFAAEDIGQQQLQQIPADQ
                     VRSVLLAQMIDLKLMAEAGHAANVENSDLYKMRLSYLVDRALRRAYTQQAVGSTISDA
                     DIKAAYDKQVAALPQQDEVHARHILVSTEDDAKAIKAQLDAGADFATLAKAKSIEPGA
                     KDSGGDLGYFTQDKMVKPFADAAFALKVNQISDPVQTQFGWHIIQVLDRRPAAKPSLD
                     ELGAQIAQQLYAQKYQVLFDQLKGAATIDIPDPTLKQQVDAQLAPQQ"
BASE COUNT          815 a         1809 c         1984 g         1003 t
ORIGIN      
        1 gcagctcaat ccgaattcgc gccaccacct ggcgttcaac ctcggctacc ccaatgccta
       61 cgatctggcg ctcggccgca ccggttcggc aatcatggtg catggcggct gctcgtcggt
      121 cggctgcttt gccatgaccg acgccgggat cgacgagatc tacggcgtgg tcgaggcggc
      181 attgcgcgcc ggacaggcgg cgatcgacgt ggcggtgttc ccgtttgagc tgactgaaac
      241 gacgctccag gcggagagtg gcagccggtg ggcgccgttc tgggccaacc tcaagcaggg
      301 cgccgatctg ttcgcggcga gcggtctccc gccggccgtg gcggtggcgc aggatgccta
      361 tgtgttcggg gccgcggcac gggcagatgc gtgcacgccc atctccgggt gggtgtgatg
      421 gatcgcgtca tctcgctcct ggccgcgctg gtcggcctga ttgcgctcgg cggcgccatc
      481 ctggtgcaca ccaatgtcga tgccgagcgc cagcagatgg cctccgacat cgcgcagatg
      541 agactgtcga tcgggctgat gagccagcag caggccccgg ctgtcgcggt cgccgaggcg
      601 gcacccgcgg caccgctgct ggcgccgtcc tcgatgccgc cggctgcggc atcctccagc
      661 gcggcgccgg aggcgctgcc ggtgccgacg ccgctggtcg cggcggctgc cgcgccggcg
      721 ccggcgacag cctcgtcgga ggacgagacc accgtcgccg agctgcagac gctgcgggcg
      781 cgggtttcgg cgctggaaga ggccaatgcc gaccaggcgt cgcagctgca ggtggcgcag
      841 gccagcctcg cgacggaggc taccgcgagc gtcgcggcag cgagtgcggc cagtgccgtt
      901 gcggcggagg gtgcctcggt ccagcccgcc gtatcgacgg cggatgcggc cgccgcggtt
      961 gcgccggcag gttcggcggc ttcggctgtc cccgccgcga tcgtcgccga cgggccgacc
     1021 aaggattgca tcccgctcgg cacgcggttc atggcggctt ccggcgacag tttcccgatc
     1081 tgccgcacca agacggtgat caaggtctcg gacgtcaccg acgggcaggc gacgatcgac
     1141 ggggccggcc cggtggtcgc cggcggcttc ggcaggctcg gcttcaacgg ctgcacggtg
     1201 atggtgtttt ctgccgaccc cgtcagcggc tacgccgaga tgcgggtcac ctgcgactga
     1261 tcccgccggt cgcgcaaacg ccagagggcc gccttgcggc gaccccctga aacttcattc
     1321 catcgaaagc ctagaagctg ccgtggcagt gcttgaactt cttgcccgag ccgcacgggc
     1381 agggggcgtt gcgcgacacc ccgacgagca gcttcggatc gatcggccgc agccgcgggt
     1441 cggcttcggc gacatcgccg ccgagccccg cgagggcgcc ggccgcggca aaggcgccgc
     1501 cgatggtgcc ggtgtagtcg gaggcggcgt cgttttcgcc gctggtcgga tcgatgtgga
     1561 tctcactgac gcggccgagg tcgaggaccg gcggcggggc gggctggcgc atctcgatct
     1621 ggatgtggct gagctgggtg atcacctgct cgcgcatgtc ggtcaagagc ttctggaaca
     1681 gctcgtaggc ttcctgcttg tattcgttga gcgggtcgcg ctgcgccagg ccgcgccagc
     1741 cgaccacctt gctcaggtgg tcgagggtga cgaggtgctc gcgccacagc ccgtcgatcg
     1801 actgcagcag cagcgacttc tccacctggc gcatgatgtc cggggtgtat ttggcgatct
     1861 gcgcggcggc ggcctcgtcg gccagcttgc ccagccgctc gcggacgatc tcggcgtcga
     1921 tgccttcctc ctcggcccac ggccgggtgc gcacgtcgag attgaggaac tgcctggcct
     1981 cggcgtcgag ctcgtcggtc ttccactgct cgggatagga gcgatccggg atggcccggg
     2041 cgacgagcgc gtcgatgacg tcgtggcgca tgtcgccgat ggtctcggcg acgtcttcct
     2101 tgtccatgag ctcgaggcgc tgctcgaaga tgaccttgcg ctggtcgttc atcacgtcgt
     2161 cgtatttgag gatgttcttg cggatgtcga agttgcgcgc ttcgacgcgg ccctgggccc
     2221 gctcgatggc cttggttacc cacgggtggg tgatcgactc gccctgctcg aggccgagct
     2281 tgccgagcat cgaatccatc gattccaccg ggaagatgcg catcagatcg tcctgcagcg
     2341 acaggaagaa cttggagtgg ccggggtcgc cctggcggcc ggaacggccg cgcagctggt
     2401 tgtcgatgcg gcggctctcg tgccgctcgg tgccgatcac catcaggccg ccggccgcca
     2461 gcgccttttc cttgtcggcg gcgatgcggg ccttgatctc ggtgatcttc tgctcgcgtt
     2521 cggcgccttc gaggcccgcc gcgtcccgct cgatgcgcat gtcgaggttg ccgccgagct
     2581 ggatgtcggt gccgcggccg gccatgttgg tggcgatggt cacggcgccg ggaatgccgg
     2641 cgtcggcgat gatgtgggct tcctgctcgt ggtagcgggc gttgagcacc tgcaggtcgt
     2701 tgatgccctt cttggtgcgc agcaaatcgg ccagcatctc ggatttctcg atcgaggtgg
     2761 tgccgaccag aaccggctgg ccgcgcttct tgcagtcctc gatgacgctc gagatttcct
     2821 cgaacttctc ctcggcggtg cggaagatgg cgtcgtcgtc gtcgatgcgg accaccgtca
     2881 cgttggtggg cacggtgacg acgttgagat tgtagatgtt ggagaattcc tcggcctcgg
     2941 tggcggccgt accggtcatg ccggagagct tcttgtagag gcggaaatag ttctggaagg
     3001 tgatcgaggc gagggtctgg ttctcgggct ggatcttgac gtgctccttg gcctcgagcg
     3061 cctggtgcag gccttccgag tagcggcggc ccggcatcat gcggccggtg aactcgtcga
     3121 tgatcaccac ttcgtcgttg cggacgatgt agtccttgtc cttcgaaaac atcttgtggg
     3181 cgcgcagcgc cgaattggcg tggtgcacga ggttgacgtt ctcgatgtcg tagaggcttt
     3241 cggccttcag caggccggcg tcgcgcagca ggttctcgag cttttcggtg ccgccttcgg
     3301 tgaaggtcac ggagcgctgc ttctcgtcgt ggtcgaaatc ttcggcgccg atctgctgca
     3361 tcagctcgtc gacgctggtg tagaggtcgg agcggtcgtc ggtcgggccg gagatgatca
     3421 gcggggtgcg ggcttcgtcg acgaggatcg aatccacttc gtcgacgatg gcgaaggcgt
     3481 ggccgcgctg caccatctgg tcgcgcgaat acttcatgtt gtcgcgcagg tagtcgaagc
     3541 cgtactcgtt gttggtgccg taggtgacgt cgcaggcgta ggacgccttg cgctcgatgt
     3601 cgtcgaggcc gtggacgatg atgccgacgg tcaggccgag gaatttgtag atctggccca
     3661 tccattcgct gtcgcgccgg gccaggtagt cgttgacggt caccacgtgg acgcccttgc
     3721 cggtgagggc attgagatag accggcaggg tggcgacgag ggtcttgcct tcgccggtcc
     3781 gcatctcggc gatggagcgg tcgttgagca ccatgccgcc caccagctgc acgtcgaagt
     3841 gccgcatgcc gagcgcccgc ctggaggcct cgcgcaccgc cgcgaaggcc ggcacgatca
     3901 tgtcgtcgag gctcgttccg gccgcgacct gggccttgaa ttcgtcggtc ttggcgcgca
     3961 gctcggcgtc ggtgagcttt gccatctccg gttcgagcgc atttatggcg tcgaccttgg
     4021 gctggtattt ccggacctgg cggtcattgg cagagccgaa aatcgccttg gcaatagcgg
     4081 cgaggaccat ggagcattcc ttgtcttgat ggcgccgcat ttgaagggcg cgcaggcggc
     4141 cgtcggtacc gccctgtcgg gctgaaaacc gccgcttttc gggcgtttac aggcgttgcg
     4201 gtatgtaaga gcgggggggt ctattgtcaa cggatgcgaa atcggccaaa ccaccggccg
     4261 cgcgccgcga gggcccggaa acgcgcaggg agcaagcgaa gtcatgacgt cctacatcct
     4321 ccggggcaag ctccccggtt tcctcaaatt cctgttgctg gcgctggtgg ccctgacgct
     4381 ggcggggctg ccgttcgcgg tctcggcgca agacagctcg tcggcgtcgc agccggccgc
     4441 aaccgaccag gcgcaggcct cgtcgtcggc cgagcccgcc gccccggcgc agcccgatcc
     4501 caaggcggtc gtggcgaccg tcggcggcca ggacatcacc gaggccgacc tgtcgtttgc
     4561 cgccgaggat atcggccagc agcagctgca gcagatcccg gccgaccagg tgcgctcggt
     4621 gctgctggcg cagatgatcg acctcaagct gatggccgag gccggccatg ccgccaacgt
     4681 cgagaactcc gacctctaca agatgcggct gagctatctc gtcgaccggg cgctgcgccg
     4741 cgcctacacg cagcaggcgg tcggcagcac gatcagcgat gccgacatca aggcggccta
     4801 cgacaagcag gtcgccgccc tgccgcagca ggacgaggtg catgcccgtc acattctggt
     4861 gagcaccgag gacgacgcca aggcgatcaa ggcacagctc gatgccggcg ccgacttcgc
     4921 gacgctggcc aaggcgaagt cgatcgagcc cggcgccaag gattccggcg gcgacctcgg
     4981 ctacttcacc caggacaaga tggtgaagcc gttcgccgac gccgccttcg cgctcaaggt
     5041 caaccagatc tccgatccgg tgcagacgca gttcggctgg cacatcatcc aggtgctcga
     5101 ccgccgcccg gcggccaagc cgtcgctcga cgaactcggc gcgcagatcg cccagcagct
     5161 ctacgcgcag aagtaccagg tgctgttcga ccagctgaag ggagcggcga ccatcgacat
     5221 ccccgacccg acgctgaagc agcaggtcga cgcgcagctg gcgccgcagc agtaagcgct
     5281 gcagcccgcg atgaattgac ggaggccggg agcgatcccg gccttcgtgt ttttcacggg
     5341 ggcgacggca gggcgcctgc gggccgacgt caagcccggc gcccgggtga gcgcggtcag
     5401 cgtcagcgtc cacgcgcagg tgcggttcta gccgccgggc ggacccacag ggcggttgct
     5461 tgcgccctgg gcgaggatcg ggcattgctc gcgccattgc acgaggtctg agacatggcg
     5521 cattcggttt ccccgctggc ccccgcttcg catccggaac tgccgccgat cgccggcgtg
     5581 cggttcgcca ccgccgaggc ggggatcaag t
//
LOCUS       DATAZA010000050         5554 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2324507, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000050 DATAZA010000000
VERSION     DATAZA010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5554
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2324507"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            3..152
                     /locus_tag="VHZ56_01275"
     CDS             3..152
                     /locus_tag="VHZ56_01275"
                     /inference="COORDINATES: protein motif:HMM:NF014672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE family protein"
                     /protein_id="HEX4296630.1"
                     /translation="MQRGGTVWACPPCVKARGYEQSDLIDGVVIAGASGMHQLIAAGG
                     ATVSF"
     gene            complement(142..825)
                     /locus_tag="VHZ56_01280"
     CDS             complement(142..825)
                     /locus_tag="VHZ56_01280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010973638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator
                     C-terminal domain-containing protein"
                     /protein_id="HEX4296631.1"
                     /translation="MPIEREKLLDEALALLNEVGLDHFSTRRLAERLGVQQPALYWHF
                     RNKSALLDALNGLMLARFHDSRLPSPGEQWDEFTFANARSFRRALLAVRDGARLNAGT
                     HPATREFADAERQLRLYVDAGFTAQQAFNIAIGVTRYVVGFVLEEQGERDREDDESEW
                     GGADPMAEIAPFPLLAKALQPLISGGTINTEAVFEAGLGYMVAGMRESLGAGATPPAG
                     RARPRRARS"
     gene            900..2087
                     /gene="tet"
                     /locus_tag="VHZ56_01285"
     CDS             900..2087
                     /gene="tet"
                     /locus_tag="VHZ56_01285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004119024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tet(A)/Tet(B)/Tet(C) family tetracycline efflux
                     MFS transporter"
                     /protein_id="HEX4296632.1"
                     /translation="MNRSLLVIILVATLDAIGIGLIFPILPALLKELTGNGEISTIYG
                     IILASYAAMQFLCAPILGMLSDRFGRRPVLIVSLAGAAIDYLIMAFTPTLWVLVAGRV
                     IAGITSANMSVAGAYIADISEEKDRAQRFSWMSAAFGVGFIVGPVLGGLLSVYFLRAP
                     FLVAAGLNALNLVLALTVLKESRVPSREPLELRALNPFVPLKWALSFPALAPLLALFL
                     IFAINGDIPGTISVLYSTANFHWDGVTVGLWLAAFGCFHALAQAFVTGPLTKRLGERW
                     TLVVGIVADVLAFLGFGFATQGWMAFALSPLSAIGGVGLPALQSLMSAQVGEDRQGEL
                     QGVLASAQSITSILGPLIGTTIFFWTKPVFVGAIWLVAAALYLLAIPVLGRLFRGART
                     AMA"
     gene            2338..2610
                     /locus_tag="VHZ56_01290"
     CDS             2338..2610
                     /locus_tag="VHZ56_01290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEX4296633.1"
                     /translation="MNKNDLIGVVADGASITKAQAGEAVDAVFEAITKSLKKADEVRL
                     VGFGTFSVSRRKASIGRNPATGAEIKIPASNQAKFKPGKGLKDAIN"
     gene            complement(2677..2752)
                     /locus_tag="VHZ56_01295"
     tRNA            complement(2677..2752)
                     /locus_tag="VHZ56_01295"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2717..2719),aa:Val,seq:tac)
     gene            2907..2983
                     /locus_tag="VHZ56_01300"
     tRNA            2907..2983
                     /locus_tag="VHZ56_01300"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2941..2943,aa:Asp,seq:gtc)
     gene            complement(3139..3513)
                     /locus_tag="VHZ56_01305"
     CDS             complement(3139..3513)
                     /locus_tag="VHZ56_01305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296634.1"
                     /translation="MTKLALVAVAALALSGFSTIAMAQTSPGAGAPDFAKADANSDGG
                     VDQGEFTAAFPCQGAQAFTQADTNKDGKLDANEYAAVGGEACTTGGDNGNNGSPNTQN
                     GGNNNNGSSAGGNNNGSSANNG"
     gene            3858..4406
                     /locus_tag="VHZ56_01310"
     CDS             3858..4406
                     /locus_tag="VHZ56_01310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296635.1"
                     /translation="MRLFSTLAIATAIVVAAPVAANAADLETRIPVSDNSDSLPVADG
                     GFNWNGFYAGVYGVTQNSPVGGLQYGLGIDVGANARFEMVLVGGEIDYQGLTGGALST
                     SYLQGLGKFGVALSDNVVLYAAAGAGTDLGPLPDSDVLAGGGVEFALADNVSLDARYL
                     HGFPLTGGNPKDQFTLGANFHF"
     gene            4639..5148
                     /locus_tag="VHZ56_01315"
     CDS             4639..5148
                     /locus_tag="VHZ56_01315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296636.1"
                     /translation="MRSLKLALLATAATAVLSSAAFAADLVVDTPNTPPVVDNSFNWD
                     GAYIGVLLQGQSAPSAFGLGVDLGVNTLMNNLVLGGELEFVGSTGGNWDAQATGKIGG
                     LIADNALLYAYSGIGTRNVTGAYVPLGAGIEFGLTSNLSLKAEGQYNFDIGGGTNSAA
                     VKVGLNWHF"
     gene            5322..>5554
                     /locus_tag="VHZ56_01320"
     CDS             5322..>5554
                     /locus_tag="VHZ56_01320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296637.1"
                     /translation="MKFARSLLAGSALAVALASSAQAADLLKPADPIYSSQLFNFEGL
                     YLGATAGGALASSGYGTLGVVVGSNFAITDGIIA"
BASE COUNT          869 a         1733 c         1855 g         1097 t
ORIGIN      
        1 tgatccagcg gggcgggacc gtctgggcct gcccgccttg cgtcaaggcg cgcggctatg
       61 agcagtcgga cctgatcgat ggcgtggtca ttgcgggagc ctcgggcatg caccagctga
      121 tcgcggcggg tggcgccacg gtcagcttct agcccgccgt ggccgggctc ggccagcggg
      181 cggggtcgca ccggcaccga gactctcgcg catgccggca accatgtaac cgaggccggc
      241 ctcgaatacg gcctcggtat tgatcgtccc gcccgagatc aatggctgca gggcctttgc
      301 cagcagcggg aagggggcga tctcggccat cggatcggcg cctccccact cggactcgtc
      361 gtcctcgcgg tcgcgctcgc cctgctcctc gagcacgaag ccgacgacgt agcgggtcac
      421 gccgatcgca atgttgaagg cctgctgggc ggtgaaaccg gcgtcgacgt agagccgcag
      481 ctggcgttcg gcgtcggcga attcgcgcgt cgccgggtgg gtcccggcat tgaggcgcgc
      541 gccgtcgcgg accgccagca gggcccgccg aaagctgcgg gcgttggcga aggtgaactc
      601 atcccattgc tcgcccggcg agggcagccg gctgtcgtgg aagcgcgcca gcatgagccc
      661 gttgagcgca tcgagcagcg ccgatttgtt gcggaagtgc cagtagagcg cgggctgctg
      721 cacgccgaga cgttcggcca ggcgccgggt gctgaaatgg tccagcccaa cctcgttgag
      781 gagggccagc gcttcgtcca gcagcttttc gcgttcgatg ggcatgcggc tcttgactta
      841 tcaccgataa ggaactttat caccgataag ttagcttatc gttgataagg agacggtcca
      901 tgaaccgttc attgctggtc atcatcctgg tggcgaccct cgacgccatc ggcatcgggc
      961 tgatcttccc catcctgccg gcgctgctca aggagctgac ggggaacggc gagatctcga
     1021 cgatttatgg catcatcctc gcgtcctacg cggcgatgca gttcctgtgc gcgccgatcc
     1081 tggggatgct gagcgaccgc ttcggacggc ggcctgtgct gatcgtttcg ctggccggcg
     1141 ccgcgatcga ctacctgatc atggcgttca cgccgacgct ctgggtgctg gtggcggggc
     1201 gcgtcattgc cggcatcacc agcgccaaca tgtcggtggc cggcgcctat atcgccgata
     1261 tctccgagga gaaggaccgg gcgcagcgct tcagctggat gagcgcggcg ttcggcgtcg
     1321 gcttcatcgt cgggccggtg ctcggcggcc tgctgagcgt ctatttcctg cgggcgccgt
     1381 tcctcgtggc cgccggcctc aatgcgctga atctcgtcct ggccctgacc gtgctcaagg
     1441 aaagccgggt tcccagccgc gagccgctcg agctgagggc gctcaatccg ttcgtgccgc
     1501 tcaaatgggc gctcagcttc ccggcgctgg cgccgctgct ggcgctgttc ctgatctttg
     1561 ccatcaatgg cgacattccc ggcaccatct cggtgctcta cagcaccgcg aattttcact
     1621 gggacggggt gacggtgggg ctgtggctgg cggcgttcgg ctgcttccat gccttggcgc
     1681 aggcgttcgt caccgggccg ctgaccaagc ggctcggcga gcgctggaca ctggttgtcg
     1741 gcatcgtcgc cgacgtgctg gcgttcctcg gcttcggttt tgcgacacag ggctggatgg
     1801 ccttcgcgct gtcgccgctg tcggcgatcg gcggggtcgg gctgccggcg ctgcagtcac
     1861 tgatgtcggc gcaggtgggc gaggatcggc agggcgagct gcagggcgtg ctggcgagcg
     1921 cccagagcat cacctcgatc ctcgggccgc tgattggaac gacgatcttc ttctggacga
     1981 agccggtctt cgtcggcgcc atatggctgg tcgcagcagc gctttatctc ctggcgattc
     2041 cggtactggg gcggctgttc cggggagcca ggacggcgat ggcctgaagg gcgttgccgc
     2101 ggtcgagcgg gcagggccgg tcgcgaactg gtggaaaacc ccggaatccg ggcgtttgcg
     2161 ggcgaaaacc ggggtttttc cattgaccgc cccaaattgc cgtcccatta acgtcggcgc
     2221 ggcggtcgcg tcggggaaaa gcccggaact ccttgcgttg cgcggggaat cgccagatgg
     2281 attgccgcgg ttttttcggt tcgcaacagg gcgggccttt cactgtgagg aaacgctatg
     2341 aacaagaacg atctgatcgg cgtcgtggcc gatggggcga gcatcaccaa ggcgcaggct
     2401 ggggaagccg tcgacgccgt tttcgaggcg atcaccaagt cgctgaagaa ggccgatgag
     2461 gttcgtctcg ttggcttcgg cactttctcc gtttctcggc gcaaggcctc gatcggccgt
     2521 aacccggcga ctggcgcgga aatcaagatt ccggcgtcca accaggccaa gttcaagccc
     2581 ggcaagggtc tcaaagacgc gatcaactga tcgcagccgg caccactttc gcggccctgc
     2641 gcgccagccg gcggcggggc cgtttccatg tcgggatggt gggcggtgac ggtctcgaac
     2701 cgccgaccct ctcggtgtaa acgagatgct ctaccaactg agctaaccgc ccggggcgcc
     2761 gaaggcgcgg acctaaatat tggctggcga ctcgcgcgtc aaccggacgc ccgaagggct
     2821 tggcgagcgg cccgaaagct tgcttgactt gccaaactgc cgccggtaca cggacgccac
     2881 gttgcgcggg gccctgcttc gctgctgcgg gagtagctca gttggttaga gcgtcggcct
     2941 gtcacgccga aggtcgcggg ttcgagcccc gtctctcgcg ccaccctctc gataatccgg
     3001 caggttagct cggtttcttc gccacaggcg cgctgagcgc tttggcgccc gtctcacgac
     3061 ccgagtggcc gcgatcaccc cccgcaaata gaacctgtat gaactgggcg gagccgactg
     3121 gcggccccgc ccgaagtttt agccgttgtt ggcggacgag ccgttgttat tgccgccggc
     3181 agacgagccg ttgttgttgt tgccgccgtt ctgcgtgttg gggctgccgt tgttgccgtt
     3241 gtcgccgccg gtcgtgcagg cttcgccacc gaccgcagcg tactcgttgg catcgagctt
     3301 gccgtccttg ttggtatcgg cctgcgtgaa cgcctgggcg ccctggcagg ggaaggcggc
     3361 cgtgaattca ccctgatcga cgccgccatc gctgttggcg tccgccttgg cgaaatcggg
     3421 ggcgccggcg cccggcgagg tctgcgccat cgcgatcgtg ctgaagccgc tgagtgcgag
     3481 agccgcgacg gccaccaatg ccagtttggt catttttttc ttcctgttgc ttgatgaaag
     3541 gggcgacgct ggctgatcaa cttgcgttgg accggatggt tgcttcgatg cgcgccgcca
     3601 gcggttctca ggggttgctg cgatccgagt cgcaatgccg ggcgggtgtg acctgtcggc
     3661 cacagtgcca gggtgcctta ttcctgccgc ccgcaggacc cattgccctc acaaatcccg
     3721 aggattctca gggctgtcgg atcggctgaa gcggtgttcc ataacgccgt ttttcgctgc
     3781 cggcctcgca gtttggacgc cggaaccgcc gaggggagcg agcgttttca gtccaggaaa
     3841 atctgaagga gaacggcatg cgcctgttca gcactctcgc catcgctacc gccattgtcg
     3901 tggcagcgcc cgtcgcagcg aatgcggctg atctcgagac ccggattccg gtgtcggata
     3961 attccgactc cctgccggtc gccgatggcg gcttcaactg gaacgggttc tatgccggcg
     4021 tgtacggcgt gacgcagaac agcccggtgg gtggcctgca atatggcctc ggcatcgacg
     4081 tgggcgccaa tgcccggttc gagatggtgc tggtcggcgg cgaaatcgac taccagggac
     4141 tcaccggcgg tgcgctctcg accagctacc tgcaggggct gggcaagttt ggcgtcgcgc
     4201 tcagcgacaa cgtcgtgctc tacgccgcgg cgggcgcggg caccgatctc ggcccgctgc
     4261 cggactcgga cgtgctcgcc ggcggtggag tcgagttcgc gctggcggac aatgtatccc
     4321 tcgatgcgag gtacctgcac ggcttcccgc tgaccggcgg gaacccgaag gatcagttca
     4381 cactgggggc gaacttccac ttctgaggat caatcacgaa attgggagtg atcgagcccc
     4441 gccgctggcg gggccgattt tgtttgtaag atcaagatgt tgcgtgaaag ccacaagtgt
     4501 ggcgcatgtg gcacatcgat gacaaaatgc gggctttaac ggttcttcta agactttgtg
     4561 cgcgttaaaa ggatgctctc gggagtcgca cctcccaaaa gcgcggcttc cagattcgaa
     4621 ttgcaaagga ctttgaccat gcgttctctc aagcttgcct tgctcgcaac cgcggctacg
     4681 gctgtgcttt cgtcggcggc tttcgctgcc gatctcgttg tcgacacgcc gaacacgcct
     4741 ccggttgtgg acaacagctt caactgggac ggcgcctata tcggcgtgct gctccagggc
     4801 cagtcggcgc caagcgcgtt cggtctgggt gtggaccttg gtgtcaacac tctgatgaac
     4861 aacctggtgc tcggtggcga actcgagttc gtcggctcga ccggtggtaa ctgggacgcc
     4921 caggcgaccg gcaagattgg cggcctcatc gccgacaacg cgctgctcta tgcctatagc
     4981 ggtatcggca cccgcaacgt caccggcgcg tacgttccgc tcggtgccgg catcgagttc
     5041 ggcctcacca gcaacctcag cctgaaggcc gagggtcagt acaatttcga catcggtggc
     5101 ggcaccaatt ccgccgctgt gaaggtcggt ctcaactggc acttctaaga cgttccgcct
     5161 cctcggcggc ttcgttcgaa agggctccgc gatgcggggc ccttttgctt ttgagtaaga
     5221 tttcgttagg cctacgaacc aactaaagtt ttccgctaat tgccggtaaa tgccgcggca
     5281 ggcaaaatcc tctcgatcaa accgcctccg aggggactgt catgaaattc gcgcgttcac
     5341 tgctcgccgg cagcgccctt gccgtggccc tggcgtcttc agcgcaggcg gcggatctgc
     5401 tgaagccggc cgacccgatc tattcgagcc agctgttcaa tttcgagggc ctctatctcg
     5461 gtgccaccgc cggcggagcg ctggcgagca gcggctacgg cacgctcggc gtcgtggtcg
     5521 gttcgaactt cgcgatcacc gacggcatca tcgc
//
LOCUS       DATAZA010000051         8959 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2092510, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000051 DATAZA010000000
VERSION     DATAZA010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 8959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8959
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2092510"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1329
                     /gene="xseA"
                     /locus_tag="VHZ56_01325"
     CDS             <1..1329
                     /gene="xseA"
                     /locus_tag="VHZ56_01325"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEX4296638.1"
                     /translation="FQFVRVRGEISGFRGVHSSGHAYFTLKDDAASIDAVVWKTTWPR
                     LRFKPEEGLEIIATGRLTTFPRSSKYQIVIEQIEPAGAGALMALLEERRKKLAAEGLF
                     AAERKQPLPYLPRIIGVVTSPTGAVIRDILHRLDDRFPSHVLVWPVRVQGETAAMEVA
                     AAIDGFNALADNGPVPRPDLLIVARGGGSIEDLWSFNEEIVVRAVAASRIPVISGVGH
                     ETDTTLVDYAADHRAPTPSAAAEAAVPVRAELIAHVDDQGQRARTVIRRQLAARRDRL
                     RAAAGELPRPLDLLSIARQRLDLAATHLAASLRHLGQQKRLRFATAAARLSPTALRTD
                     LRHAHARLGPCADRLQPAARRVLAQRAERLAATVGLLDAYSYKSVLARGFALVNDAEG
                     NLVRSKDDVGPGAVLAIEVADGRIGATVGGAPPARKRRAAVRDDRQESLF"
     gene            1389..1613
                     /locus_tag="VHZ56_01330"
     CDS             1389..1613
                     /locus_tag="VHZ56_01330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007814243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2093 domain-containing protein"
                     /protein_id="HEX4296639.1"
                     /translation="MNIYDRNLTPSEAVIRYLDGDYVVVRPGSFVRCAVTSRPIPIDE
                     LMYWNVDRQEPYVDAGAALEAYRRHGLSGK"
     gene            1615..2709
                     /locus_tag="VHZ56_01335"
     CDS             1615..2709
                     /locus_tag="VHZ56_01335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296640.1"
                     /translation="MPPRTLLFISNGHGEDSIAAEIVRRLPPGFAVAAYPTLGDGHAY
                     AGVCPLVGPRRHLPSQGQRRRGSFWRDARSGYGIGAALRFMRTEAPAYDAIVVVGDLL
                     GIVMCWWSGNRVRLYLDVYKSGFANRYSGLERWIVRRSCDLVLTRDPILAAQLETAGV
                     AARFAGNVMMDTLVTGPYDAAGRRAHPRAVALLPGSRAATADNLALQLAALRLLPDAA
                     GLDLFAALAPGTDAASLARGTGLVLDGDTLRGDGLSVHLSTGSLGAVLAASDIVLGQG
                     GTANLQALGMGKPVISFLAEDARPARRRRIAALAGDSRIVTERTPEALAAALAALLAD
                     PAEIARRGAIGRERMGPPGAIAAIIAELQR"
     gene            complement(2687..3424)
                     /locus_tag="VHZ56_01340"
     CDS             complement(2687..3424)
                     /locus_tag="VHZ56_01340"
                     /inference="COORDINATES: protein motif:HMM:NF015961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF374 domain-containing protein"
                     /protein_id="HEX4296641.1"
                     /translation="MSSPPDGAEAPVQWIDRPGVRSFLGRFLIGGYMRFVKLSSRAEF
                     DPPGLWDRVDENWPAILVSWHGQSNMAYMMTREPKRLALLFSMHPDGQMMAALARSLG
                     FQTLDGSGASARQARGTGGVAAFRSMLKTIKSGTTLFATADIPPEPGRNVSPGMIALA
                     RRSGRPMFTLATASSRRKVLERVWDKMQLNFPFSRIVFAWEGPFYMTDPAVTDDTYAA
                     GLAASLDRVLAQAFARADGAASAAARR"
     gene            complement(3421..3663)
                     /locus_tag="VHZ56_01345"
     CDS             complement(3421..3663)
                     /locus_tag="VHZ56_01345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4170 domain-containing protein"
                     /protein_id="HEX4296642.1"
                     /translation="MPSKPAPQKQLLHLVLGGELEDIEGISFKDLSKVELVGVYPNYA
                     AAYAVWKQKAQQTVDNAEMRYFVVHLHRLLEPDEAE"
     gene            complement(3663..4499)
                     /locus_tag="VHZ56_01350"
     CDS             complement(3663..4499)
                     /locus_tag="VHZ56_01350"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006332233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HEX4296643.1"
                     /translation="MPDFPAYSEDLELLRTAAVTAGIIASSYFRRDLKTWTKANASPV
                     SEADIVLDKFLQSALTTARPDYGWLSEESPDDLSRLAYQRVFIVDPIDGTRGFIRGED
                     SWTVSLAVVERGVAVAGVVFAPARNEMYEGSLGGGARLNGAPIVRQTPHDRQAPLIPA
                     PGAVHQELQAAGLDYTRGPAYPSLAYRLVQVATGKLDATVVRRGASDWDIAGAAAILA
                     ECGVVFEDACMGAMQFNAEEVRHGALAAFAQVSLRDVLTGALVKVYGCPEPQQDLERK
                     TT"
     gene            4736..5254
                     /locus_tag="VHZ56_01355"
     CDS             4736..5254
                     /locus_tag="VHZ56_01355"
                     /inference="COORDINATES: protein motif:HMM:NF039656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6101 family protein"
                     /protein_id="HEX4296644.1"
                     /translation="MSIEGANVVLMFGTRSATTIAAVPFTARQFGPANDNGPRDPVKT
                     VTVRKRLEKSGVAIKVKVPVDEFVGVAVSTHISGEGVLTSTIELVHGDPELNYQVFEE
                     VGNSNVVAEWQNWGKKLRLPLYIKAGDGSLLPYSQQVSGVALGNTVSRRRLAHDTERR
                     PRFLNRRQPGAE"
     gene            5435..6352
                     /locus_tag="VHZ56_01360"
     CDS             5435..6352
                     /locus_tag="VHZ56_01360"
                     /EC_number="4.2.2.n1"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEX4296645.1"
                     /translation="MKLVVALGLALLASLVPPPVLAAIPSAPSAYCFDRELDDGRPRP
                     ICIHLATYDADVCDAIARDAALWNLPPGYFARLIWQESHFDANAVSWAGAEGIAQFMP
                     STGRLQDLRNAYDPAEALYRSARYLDFLDRKFGNLGLAAAAYNGGENAVARFIAGTGY
                     LAEETLDYVDRITGLPITDWLAGPSSPPSYDLAPDKSFHDACIALATNASVVAFTPPT
                     AVVLPWGIQLAQFFSPATARRNFARLQQQFAAVLGGEDLMLVAKRNPNFGRALRYTVE
                     IGRDDAKGATSLCAGLRKAGGACLVVRND"
     gene            complement(6349..7290)
                     /gene="ubiA"
                     /locus_tag="VHZ56_01365"
     CDS             complement(6349..7290)
                     /gene="ubiA"
                     /locus_tag="VHZ56_01365"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HEX4296646.1"
                     /translation="MPSAKAKVGVVADAQRGNWVDRYAPDWLKPYARLARWDRPIGFW
                     LLFWPCGYALALAALAVPGRGFNWIALVEMFVGAIAMRGAGCTLNDIVDAGLDAKVTR
                     TRSRPIPSGQVSKRQAAVFLVLQLVVAAAIVATFNLVTIGLAVLSLLLVAIYPFMKRI
                     TWWPQFFLGLAFSWGALVGWTSQLGTLSLPPLLLYVGCIFWVIGYDTIYALQDIEDDA
                     LAGIKSTARLFGENVKLAVAGFYILAVIFWLVAAAMAGDVSVFVMVLIVPAGLLAWQV
                     LTLEPKDPRNALRMFKANNWVGLTLTAAMLLEVVIHS"
     gene            7352..8101
                     /locus_tag="VHZ56_01370"
     CDS             7352..8101
                     /locus_tag="VHZ56_01370"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEX4296647.1"
                     /translation="MPRSHSTLPRLHVEPDLEAGAKIMLGPEQSAYLLTVLRRAEGDG
                     VVVFNGRDGAWLGRIVAAGKKGVTLELAVQAAHQTPPSELWFGFAPLKTGRLDYLVQK
                     ATEMGAGTIQPVLTEFTQVHRLKPEKLRAYALEAAEQCEVLTLPVIAPEIALGRLLDT
                     WRPTQGLRRLLFADETEPSASPRLRIAELRGLPVGLLIGPEGGFSAAERALLLAQDFV
                     VPISLGPRILRADTAAVAALAVIQAIIGDWR"
     gene            8187..>8959
                     /locus_tag="VHZ56_01375"
     CDS             8187..>8959
                     /locus_tag="VHZ56_01375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-cysteine ligase family protein"
                     /protein_id="HEX4296648.1"
                     /translation="MAGAESSPLITSRADMVEVLARGSKPKSEWRVGTEHEKHVYRKT
                     PVRPVPYEGSDGIHALLDGIGARTGWQPFFDAGNPIGLRNAGPVGGISLEPGGQFELS
                     GAPQASIHDAARELDAHLADCHAVGAALNIHFLGLGVTPLWSVAELRRMPKSRYAIMT
                     PYMEKVGTLGTSMMYRSATVQANLDFSSEADMVKKMRVALALQPVVTALFANSPFVDG
                     KPSGDLSFRARIWLDTDRARTGLLPFVFDDGFGFDRYVE"
BASE COUNT         1362 a         3446 c         2770 g         1381 t
ORIGIN      
        1 ttccagttcg tccgcgtgcg cggcgagatc tccggcttcc gcggcgtcca ttcctccggc
       61 cacgcctatt tcaccctcaa ggacgacgcc gcctcgatcg acgccgtggt gtggaagacc
      121 acctggccgc gcctccgctt caagccggag gaggggctcg agatcatcgc caccgggcgg
      181 ctcaccacct tcccgcgctc gtcgaaatac cagatcgtca tcgagcagat cgaaccggcc
      241 ggcgccggcg cgctgatggc gctgctcgag gagcggcgca agaagctcgc ggccgagggc
      301 ctgttcgccg ccgagcgcaa gcagcctctg ccttacctgc cgcgcatcat cggcgtcgtc
      361 acctcgccga ccggcgcggt gatccgcgac atcctgcatc gcctcgacga ccgcttcccc
      421 agccacgtcc tcgtctggcc ggtgcgggtc cagggcgaga ccgcggcgat ggaagtggct
      481 gccgccatcg acggcttcaa cgccctcgcc gacaacggcc cggtgccgcg ccccgacctc
      541 ttgatcgtcg cgcgcggcgg cggctccatc gaggacctct ggagcttcaa cgaggagatc
      601 gtcgtccgcg ccgtcgccgc gagccgcatc ccggtgatct ccggcgtcgg ccacgagacc
      661 gacaccacgc tcgtcgacta cgctgccgat catcgggcgc cgacccccag cgccgccgcc
      721 gaggccgcgg tgccggtgcg cgccgaactg atcgcccatg tcgatgacca gggccagcgc
      781 gcgcggacgg tcatccgccg ccagctcgcg gcgcgccgcg accggctgcg cgccgccgcc
      841 ggcgagctgc cccggccact cgacctgctc agcatcgccc gccagcgtct cgatcttgcc
      901 gcgacccatc tcgctgcctc gctgcggcat ctggggcagc agaagcggct gcgcttcgcg
      961 acggcggcgg cgaggctctc gcccaccgcg ctgcgcaccg acctgcgcca tgcccacgcc
     1021 cgcctcggcc cctgcgccga ccgcctgcag cccgccgcgc gccgtgtcct ggcgcagcgc
     1081 gccgagcgcc ttgccgccac cgtcggcctg ctcgatgcct acagctacaa gagcgtgctg
     1141 gcgcgcggct tcgccctcgt caacgatgcc gagggcaacc tcgtgcgctc gaaggacgac
     1201 gtcggccccg gtgccgtcct cgccatcgag gtcgccgacg gccgcatcgg cgccaccgtc
     1261 ggcggtgccc cgccggcccg caagcgccgc gccgccgtcc gcgacgaccg gcaggagagc
     1321 ctgttctagg cggcccgttt gcagccgcgc gctttccgcc tatatgtgac cggcgaaagg
     1381 tcctgccgat gaatatctat gatcgcaacc tcacgccctc tgaggcggtg atccgctacc
     1441 tcgacggcga ttatgtcgtg gtgcgtcccg gcagtttcgt gcgctgtgcg gtcaccagcc
     1501 gaccgatccc gatcgacgag ctgatgtact ggaacgtcga ccgccaggag ccctatgtcg
     1561 acgccggggc cgcgctcgag gcctatcgtc gccacggcct cagcgggaag tagcgtgccg
     1621 ccgcgcacgc tgctgttcat ctccaacggc cacggcgaag attcgatagc cgccgaaatc
     1681 gtccgtcgcc tgccgcccgg cttcgccgtc gccgcctatc ccacgctcgg cgacggccac
     1741 gcctatgccg gcgtctgccc gctggtcggc ccgcgccgcc acctgccgag ccagggccag
     1801 cgccgccgcg gctcgttctg gcgcgacgcc cgcagcggct acggcatcgg cgcggcgctg
     1861 cgcttcatgc gcaccgaggc cccggcctac gacgccatcg tcgtcgtcgg cgatctgctc
     1921 ggcatcgtca tgtgctggtg gagcggcaac cgcgtccgcc tctatctcga tgtctacaaa
     1981 tccgggttcg ccaatcgcta ctccgggctc gagcgctgga tcgtccgccg cagctgcgac
     2041 ctggtgctga cccgcgaccc catcctcgcc gcccagctcg agaccgccgg cgtcgccgcc
     2101 cgtttcgccg gcaacgtcat gatggatacc ctggtgaccg gcccctacga cgccgccggc
     2161 cgccgcgcgc atccccgtgc cgtcgccctg ctgcccggta gccgcgccgc gacggctgac
     2221 aatcttgcgc tccagctcgc cgccctgcgg ctgctgcccg atgccgccgg cctcgacctc
     2281 ttcgccgcgc tggcgccggg aaccgacgcc gcatcgctgg ctcgcggcac cggcctcgtc
     2341 ctcgatggcg ataccctgcg cggcgatggc ctctccgtcc acctgtcgac cggctcgctc
     2401 ggcgccgttc tcgccgccag cgacatcgtc ctcggccagg gcggcaccgc caatctccag
     2461 gcgctgggca tgggcaagcc ggtgatctcg tttctcgccg aggacgcccg gcccgcccgc
     2521 cgccggcgca tcgcggccct cgccggcgac agccgcatcg tcaccgaacg cacgcccgaa
     2581 gcgttggccg cagcgctcgc cgcgctgctt gccgatcctg ctgaaatcgc ccgccgcggc
     2641 gccatcggcc gcgagcgcat gggcccgccc ggcgccatcg ccgcgattat cgccgagctg
     2701 cagcgctagc ggcgccgtcg gcccgcgcaa acgcctgcgc cagcacccgg tcgaggctgg
     2761 cggccagccc ggccgcgtaa gtgtcgtcgg tcaccgccgg gtcggtcatg tagaacggcc
     2821 cttcccacgc gaacacgatc cgcgagaacg ggaagttgag ctgcatcttg tcccataccc
     2881 gctccagcac cttgcgccgc gagcttgcgg tggcgagcgt gaacatcgga cggcccgacc
     2941 gccgggccag cgcgatcatc ccgggcgaca cgttgcgccc gggctcgggc ggaatgtccg
     3001 cggtcgcaaa gagcgtcgtt ccactcttga tcgtcttcag catgctgcgg aacgccgcaa
     3061 ccccgccggt gccgcgcgcc tgccgcgcac tggcccccga gccgtcgagc gtctggaagc
     3121 cgagcgaccg cgccagcgcc gccatcatct gtccgtccgg atgcatcgag aacagcagcg
     3181 ccaggcgctt cggttcgcgc gtcatcatat aggccatgtt ggattggccg tgccagctca
     3241 ccaggatcgc cggccagttt tcgtccaccc tgtcccaaag ccccggcgga tcgaattcgg
     3301 cgcgcgagct cagcttcacg aagcgcatat agccgccgat gaggaaacgc ccaaggaagc
     3361 tgcgcacccc cggccggtcg atccactgca ccggtgcctc ggccccgtcg ggcgggctgc
     3421 tcactcggcc tcgtccggct cgagcagccg gtgcaggtgc accacgaaat accgcatctc
     3481 ggcgttgtcc accgtctgct gcgccttctg cttccacacc gcataggcag ccgcgtagtt
     3541 cggatacacc ccgaccagct cgaccttgct gaggtccttg aagctgatgc cctcgatgtc
     3601 ctcgagctcg ccgccgagga ccaggtggag caactgcttc tgcggcgccg gcttggaggg
     3661 catcacgtcg tcttccgttc gagatcctgc tgcggttcgg ggcagccata gaccttgacc
     3721 agcgccccgg tgagcacgtc tcttagcgaa acctgggcga aggcggcaag cgccccgtgc
     3781 cggacttcct ctgcattgaa ctgcatggcg cccatgcacg catcctcgaa caccacgccg
     3841 cattcggcga ggatcgccgc cgccccggcg atatcccagt ccgaggcgcc gcgccgtacc
     3901 accgtcgcat cgagcttgcc ggtcgccacc tgcaccagcc ggtaggcgag ggacgggtag
     3961 gctggccccc tggtgtagtc gagccccgcc gcctgcagct cctgatgcac cgcgcccggc
     4021 gccgggatca gcggcgcctg ccggtcatgc ggcgtctgcc gcacgatcgg cgcgccgttg
     4081 agccgcgctc cgccgcccag cgagccctcg tacatctcgt tgcgggccgg cgcgaacacc
     4141 acgcccgcca ccgccacacc gcgctcgacc accgccagcg acaccgtcca gctgtcctcg
     4201 ccgcggatga agccccgcgt gccgtcgatc ggatcgacga tgaacacccg ctggtaggcg
     4261 aggcggctca ggtcgtcggg gctttcctcg ctcagccagc catagtccgg ccgcgccgtg
     4321 gtcagcgccg actgcaggaa tttgtcgagc acgatgtcgg cttcgctcac cggcgaggcg
     4381 ttcgccttgg tccacgtctt gaggtcgcgc cggaaatagc tcgaggcgat gatgcccgcc
     4441 gtcaccgccg ccgtgcgcag cagttcgagg tcctcgctat aggctgggaa gtcgggcatc
     4501 gggcctcgcg tctgggccgc cttctaggcg ctattgtgga ggctggaaag gcctcgtgct
     4561 taacccgctc ttacctgcgg tcacaccctg ctaacccttg ccaaaactac ctaaacttaa
     4621 cccagtttct taagcgcgga agaaaggcgc ccggctagat tggccccata aagagagcac
     4681 cgaaaaacca agctctcgaa gttaacagga aggcgtctag caaatgggtc agagcgtgag
     4741 cattgagggg gcgaacgtcg tcctgatgtt cggaacgagg agcgcgacca ccatcgctgc
     4801 cgttccgttc acggcgcggc agttcggtcc cgccaacgac aacggcccgc gcgatccggt
     4861 caagaccgtc accgtccgca agcggctcga gaagtcgggc gtggcgatca aggtgaaggt
     4921 gcctgtcgac gagttcgtcg gcgtcgccgt ctcgacccac atttccggcg agggcgtgct
     4981 gaccagcacc atcgagctcg tccacggcga tcccgaactc aactaccagg tgttcgagga
     5041 agtcggcaat tccaacgtcg tcgccgaatg gcagaactgg ggcaagaagc tccgcctgcc
     5101 gctctacatc aaggccggcg acggctcgct gctgccctac agccagcagg tctccggcgt
     5161 cgccctcggc aacaccgtgt cgcgccgcag gctggcccac gacaccgagc ggcgcccgcg
     5221 ttttctcaac cgccgccagc ccggcgcgga gtgaaaacgg cggctgcaac ttttcgggcg
     5281 aacgctcgtt acttcactta ccgggcccgg ttgtttgccc cataacccgc cccggatata
     5341 acgatagcga cctccaaagc gctgcttcgg ctcgtcattt cccccgatga cgagccgaat
     5401 tgcgtttggc gtccgatggg agtgaggtca cgccatgaag ctcgtggtcg cgctcggtct
     5461 cgccctcctc gccagcctcg tcccgccacc ggttcttgct gcgatcccgt cggccccctc
     5521 cgcctattgc ttcgatcgcg agctcgacga cggccgtccc cgtccgattt gcatccacct
     5581 cgcgacctac gatgccgatg tctgcgacgc catcgcccgc gacgcggcgc tgtggaacct
     5641 gccgccgggc tacttcgccc gcctcatctg gcaggagagc catttcgacg ccaacgccgt
     5701 gagctgggcc ggagccgaag gcatcgccca gttcatgccg tcgaccgggc gcctgcagga
     5761 cctccgcaat gcctacgatc cggccgaggc gctctaccgc tccgcccgct atctcgattt
     5821 cctcgaccgc aaattcggca atctcggcct cgccgccgcg gcctacaatg gcggcgagaa
     5881 cgccgtggcg cgcttcatcg ccggcaccgg ctatctcgcc gaggaaaccc tcgactacgt
     5941 cgatcgcatc accgggctgc cgatcaccga ctggctcgcc ggccccagct cgccaccgag
     6001 ctatgatctc gccccggaca aatccttcca cgatgcctgc attgcgctcg cgaccaacgc
     6061 ctcggtggtc gccttcaccc cgcccaccgc cgtggtgctg ccctggggca tccagctcgc
     6121 gcagttcttc tcgccggcga cggcgcggcg caattttgcg cgcttgcagc agcagttcgc
     6181 cgcggtcctc ggcggcgagg acctgatgct cgttgccaag cgcaatccca atttcggccg
     6241 cgccctgcgc tacaccgtcg agatcggccg cgacgacgcc aagggcgcaa ccagcctctg
     6301 cgccgggctt cgcaaggccg gtggcgcctg cctcgtcgtg cgcaacgact agctgtggat
     6361 gaccacctcc agcagcatcg ccgccgtcag cgtcaggccg acccagttgt tggccttgaa
     6421 catccgcagc gcgttgcgcg gatccttcgg ctccagcgtc agcacctgcc aggcgagcag
     6481 tccggccggc acgatcagca ccatcacgaa cacgctgacg tcgcccgcca tcgccgctgc
     6541 caccagccag aagatcaccg cgaggatgta gaacccggcg accgccagct tgacgttctc
     6601 gccgaacagc cgcgccgtcg acttgatccc ggccagcgcg tcgtcctcga tgtcctgcag
     6661 cgcatagatc gtgtcgtagc cgatgaccca gaagatgcag ccgacgtaga gcagcagcgg
     6721 cggcaggctc agcgtcccga gctgcgacgt ccacccgacc agcgcccccc acgagaaggc
     6781 gaggccgagg aagaactgcg gccaccaggt gatccgcttc atgaacggat agatcgcgac
     6841 cagcagcagc gacagcaccg ccagcccgat ggtcacgagg ttgaacgtcg cgacgatcgc
     6901 cgccgccacg accagttgca gcaccaggaa gaccgccgcc tgccgcttgc tcacctggcc
     6961 ggaagggatc ggccgcgacc gcgtccgcgt caccttggcg tcgagcccgg catcgacgat
     7021 gtcgttgagc gtgcagccgg cgccgcgcat ggcgatggcg ccgacgaaca tctcgaccag
     7081 cgcgatccag ttgaagccgc gtcccggcac cgccagtgcc gccagcgcca gtgcgtagcc
     7141 gcacggccag aacagcagcc agaacccgat cggccggtcc cagcgggcca gccgcgcata
     7201 aggcttcagc cagtccggcg cgtagcggtc gacccagttg ccgcgctgcg catccgcgac
     7261 caccccgacc ttcgccttgg cacttggcat ggcgcgccct cccgtgcggt aatgcgtggt
     7321 gactatcccg ctcgccccgc cgcaacgcaa gatgccccgc agccacagca cattgccacg
     7381 cctccacgtc gagcccgacc tcgaggccgg cgcgaaaatc atgctcggcc cggagcagag
     7441 tgcctacctg ctgaccgtgc tgcggcgcgc cgaaggcgac ggcgtcgtcg tcttcaacgg
     7501 ccgcgacggc gcctggctgg gccgcatcgt cgccgccggc aagaaaggcg tcacgctcga
     7561 gctcgccgtc caggccgccc accagacacc gccgtccgaa ctctggttcg gcttcgcccc
     7621 gctgaagacc ggccgcctcg actatctggt gcagaaggcc accgaaatgg gcgccggcac
     7681 catccagccg gtgctgaccg aattcaccca ggtgcaccgc ctgaagccgg aaaagctccg
     7741 cgcctatgcg ctcgaagccg ccgagcagtg cgaggtgctg acgctgcccg tcatcgcgcc
     7801 cgagatcgcc ctcggccgcc tgctcgacac ctggcgcccg acccagggcc tgcgccgcct
     7861 gctgttcgcc gacgagaccg aaccttcggc gtcgccgcgg cttcggatcg ccgaactgcg
     7921 cgggctgccg gtggggctgc tgatcggccc ggagggcggc ttttctgccg cggaacgggc
     7981 gctattgctc gctcaggact tcgtcgttcc aatcagcctc ggcccccgga tcctgcgcgc
     8041 cgacaccgcc gccgtggccg ctctggcggt gatccaggca atcatcggcg attggcgata
     8101 aagggattgc tttcgcaagg ccgctggcta ttgtcccggc caaaccggcg accgtccggt
     8161 gcccaatacg cccaccggga ggcctcatgg ccggcgcaga gtcctcgccg ctgatcactt
     8221 cgcgcgccga tatggtcgag gtgctcgccc gcggcagcaa gccgaaatcc gagtggcggg
     8281 tcggcaccga gcacgaaaag cacgtctacc gcaaaacccc ggttcgtccg gtcccctacg
     8341 agggcagcga cggcatccat gcgctcctcg acggcatcgg cgcccgcacc ggctggcagc
     8401 ccttcttcga cgccggcaac cccatcggcc tgcgcaacgc cggcccggtc ggcggcatct
     8461 cgctcgagcc aggcggccag ttcgagctga gcggcgcgcc gcaggcgagc atccacgacg
     8521 ccgcccgcga gctcgacgcc cacctcgccg attgccacgc cgtcggcgcc gcgctgaaca
     8581 tccatttcct cggcctcggc gtcaccccgc tgtggtccgt cgccgaactt cgacgcatgc
     8641 ccaaatcgcg ctacgccatc atgaccccct acatggaaaa ggtcggcacg ctgggcacct
     8701 cgatgatgta ccgctcggcc acggtgcagg ccaatctcga cttctccagc gaagccgaca
     8761 tggtcaagaa gatgcgcgtc gccctggccc tccagcccgt cgtcaccgcg ctctttgcca
     8821 attccccctt cgtcgacggc aagccctcgg gcgacctgag ctttcgcgcc cgcatctggc
     8881 tcgacaccga ccgcgcccgt accggcctgc tgccgttcgt cttcgacgac ggcttcggct
     8941 tcgaccgcta cgtcgagca
//
LOCUS       DATAZA010000052         2075 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1164124, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000052 DATAZA010000000
VERSION     DATAZA010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2075
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1164124"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1025)
                     /locus_tag="VHZ56_01380"
     CDS             complement(<1..1025)
                     /locus_tag="VHZ56_01380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX4296649.1"
                     /translation="MALRNIAIIAHVDHGKTTLIDVLLRQSGSFRDNQRVEERAMDSN
                     DLERERGITILAKVTSLVWKGTRINIVDTPGHADFGGEVERILSMVDGVVILVDAAEG
                     PMPQTKFVLSKALAQGLRPIVAINKIDRPDERHLEVLEEIFDLFIALEATPAQLDFPV
                     LYGSAKQGWMSEKPEGPKEDLGPLLDKVVAYVPEPKVEVGPFRMLVTTIERNAFLGRL
                     LTGRIMSGAVKAGDAVHSLSREGKEVEKGRISKVLAFRGLERTPIESAEAGDIVAIAG
                     LEDSTVADTITIPQNNVPIAAKPIDPPTLAVTFRINDGPLAGREGDKVQSRVIRERLL
                     REAEGNVA"
     gene            complement(1145..>2075)
                     /locus_tag="VHZ56_01385"
     CDS             complement(1145..>2075)
                     /locus_tag="VHZ56_01385"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4296650.1"
                     /translation="VSASYWMLLGARLVIACCHGLFFGVAIVMASRLAPDGRQTSAIS
                     VVVAGTALAQILGVPIGTAIGHAYGWRMSFWVIAILGAAALAVLLVLIPRTADPARGR
                     DDFRAELAAATRPAVLLSDLIIALFMTGVFTLFAYVVPLMTQLSGVPDGFVPWVLFGM
                     GFLGFFGNLAGGRLGDWKPQATMIGILAFIFVMALAMAAVAHSAVGVVATLLATWLVG
                     FGFVAPVQGRILKEAQDAPNFASTLISTAFNVGIASGAALGGAALTAGWGYGILPLIE
                     AAFLVLALGGVLLLGARDRRRAVLSAAAAPATE"
BASE COUNT          367 a          705 c          696 g          307 t
ORIGIN      
        1 gcgacattgc cctcggcctc gcgcagcagc cgctcgcgga tgacgcggct ctgcaccttg
       61 tcgccctcgc ggccggccag cgggccgtca ttgatgcgga aggtcaccgc cagcgtcggc
      121 ggatcgatcg gcttggccgc gatcggaaca ttgttctgcg ggatcgtgat ggtatcggcg
      181 acggtcgagt cctcgagccc ggcgatggcg acgatgtcgc ccgcctcggc cgactcgatc
      241 ggcgtgcgct ccagcccgcg gaatgccagc accttgctga tccggccctt ctcgacttcc
      301 ttgccctcgc ggctcagcga gtgcacggcg tcgccggcct tcaccgcgcc agacatgatg
      361 cggccggtga gcagccgccc gaggaaggcg ttgcgctcga tggtggtgac cagcatgcgg
      421 aacgggccca cttccacctt cggctcgggc acgtaggcaa ccaccttgtc gagcagcggc
      481 ccgagatcct ccttcggacc ctccggcttc tcgctcatcc agccctgctt ggccgaaccg
      541 tagagcaccg ggaaatcgag ctgcgccggc gtcgcctcga gcgcgatgaa gaggtcgaag
      601 atttcctcca gcacctcgag gtggcgctcg tccgggcggt cgatcttgtt gatcgcaacg
      661 atcggccgca gcccctgcgc cagcgccttg gagagcacga acttggtctg cggcatcggc
      721 ccttcggcgg cgtcgacgag gatcaccacg ccgtcgacca tcgacaggat gcgctccacc
      781 tcgccgccga aatcggcgtg gccgggggtg tcgacgatgt tgatccgcgt gcccttccac
      841 accagcgacg tcaccttggc gaggatggtg atgccgcgtt cgcgctcgag gtcgttggaa
      901 tccatggcgc gctcttcgac ccgctggttg tcgcggaacg agccggactg ccgcagcagc
      961 acgtcgatga gggtagtttt gccatggtca acgtgcgcga tgatcgcgat gttgcgcaac
     1021 gccatttggg ccgcctgagg atgagaggga gacgattggc ggctcacata gtgtgagatg
     1081 cccggattct caagacaatt cggccgaatg gcagggttgc agcgcgacgt tctcgcgcaa
     1141 ttggttactc ggtcgcagga gcggcggcag cgctgaggac ggcccggcgc cggtcgcgag
     1201 cgccaagcag gagtacgccg ccgagggcca gcacgaggaa cgccgcctcg atcagcggca
     1261 ggatgccgta gccccagccg gcggtcagcg ccgcgccacc cagcgccgcg ccgctcgcga
     1321 tcccgacatt gaaggcggtc gagatcaggg tcgaggcgaa attcggcgcg tcctgcgctt
     1381 ccttcaggat ccggccctgc accggtgcga cgaaaccgaa accgacgagc caggtggcaa
     1441 gtagcgtcgc gacgacgccg acggcgctgt gcgccaccgc agccatcgcc agcgccatca
     1501 cgaaaatgaa ggcgaggatg ccgatcatcg tcgcctgcgg cttccagtcg cccagtcggc
     1561 caccggcgag attgccgaaa aagccgagaa aacccatgcc gaacagtacc cagggcacga
     1621 agccatcggg cacgccgctg agttgcgtca tcagcggcac gacataggca aacagcgtga
     1681 acacgcccgt catgaacagg gcgatgatca aatcgctcag gagcactgca ggacgcgtcg
     1741 ccgcggcgag ctcggcgcgg aaatcgtccc tgccgcgcgc cggatcggcc gtccgcggga
     1801 tcagcacgag cagcaccgcc agcgccgccg cgcccagtat ggcgatcacc cagaagctca
     1861 tgcgccagcc ataggcatgg ccgatggccg tgccgatcgg gacgccgagg atctgggcca
     1921 gggcggttcc agcgacgacg accgagatgg cgctggtctg ccggccatcc ggcgcgagcc
     1981 ggctcgccat gacgatcgcc acgccgaaaa acaggccgtg gcagcacgcg atgacgaggc
     2041 gcgcgcccag cagcatccag tacgaggccg agacg
//
LOCUS       DATAZA010000053         4349 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_583643, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000053 DATAZA010000000
VERSION     DATAZA010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4349
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_583643"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            63..1268
                     /gene="cbiE"
                     /locus_tag="VHZ56_01390"
     CDS             63..1268
                     /gene="cbiE"
                     /locus_tag="VHZ56_01390"
                     /inference="COORDINATES: protein motif:HMM:TIGR02467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046025 - precorrin-6Y
                     C5,15-methyltransferase (decarboxylating) activity
                     [Evidence IEA];
                     GO_process: GO:0046140 - corrin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-6y C5,15-methyltransferase
                     (decarboxylating) subunit CbiE"
                     /protein_id="HEX4296651.1"
                     /translation="MIPWLDIVGVTESEMPVIPPGRTIIGPSRLLDRLAPAPATEGRG
                     PPHAKTVEWPSGLDAMLAQVEAHRGTPTTILASGDPLWFGIGSTLLRHLDPAEIRFAP
                     AASSFQLAAARLRWPLQHVATLSLHARPAELIHPHIAPGNRILALTSDATTAPHVARL
                     LVERGYGRSVLTILENLGAADERIASAAAAGFDLSINDFHVLAVDCAADPGAPLLAAI
                     PGLPDDAFVSDGQLTKREVRAVTLARLSPYPGAQLWDVGAGSGSIGIEWMRAARDATA
                     TAFEREGERLQMIAVNAARLGVPHLAIAPGDAPDTLHGHAAPDAVFLGGGVADEPLFH
                     ACWTALRSGGRFVANAVTLDAEAALFRRQARLGGELVRIEIAALDRIGDHRALRPRLP
                     VTQWAVTKP"
     gene            1265..1969
                     /gene="cobI"
                     /locus_tag="VHZ56_01395"
     CDS             1265..1969
                     /gene="cobI"
                     /locus_tag="VHZ56_01395"
                     /EC_number="2.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015916313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030788 - precorrin-2
                     C20-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-2 C(20)-methyltransferase"
                     /protein_id="HEX4296652.1"
                     /translation="MSGTLHLVGVGPGDPELLTLKAVRTLRGADVIAYPVAGEGASLA
                     LAIAAQFVSPIAVRLPVALPMSTDRDPAQAAYDAAADAIFAHLADGRDVAWLCEGDPL
                     FYGSAMYMLARLASRAPVAIVPGVTSLTAAAAAIARPLAARNEILKVLPAPLDDATLR
                     AELSTAPAVAIIKIGRHFDRIRLLLAETGHAAGAVVVEHATTERQRITRLADFAHDER
                     PYFSTILCYRGAEAWA"
     gene            1966..3729
                     /locus_tag="VHZ56_01400"
     CDS             1966..3729
                     /locus_tag="VHZ56_01400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015916312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein"
                     /protein_id="HEX4296653.1"
                     /translation="MKPAIVTFAATGAELAQQLAGLLDGEIIHCGYNGADAKIVLPRL
                     FADGRPIVGICAAGILIRLLAPHLSDKTSEPPVLAVAADGAHIVPLLGGHHGANRLAR
                     RIAEAIGGTAALTTASDAKFTRGLDDPPPGWVLADAAAAKPAMMALLVGGKVLLEGHA
                     PWIAAAGYPVSFSGSVRIRVSDSVARRERELLYHPKTLVAGIGAERGVAAPEIIALIE
                     ASLRDANLAPASLVALATIDIKSDEAAFHAAASHFGVPLRIFTTGELNQERYRLLNPS
                     DVVEAETGTPGVAEAAALKAGTLLVPKRKSRRATCAIGRAPQPIDPLAFGHAPGRLHL
                     VGVGPGDRPSRTAAAVAALDASAHWVGYGLYLDLVADLRARQEEHRFPLGDEEARARH
                     ALELAGRGQAVSLVCSGDAQIYAMASLVFELLEATGPRRLSDAARRVAIDVHPGISAV
                     QAASAAAGALIGHDFCCISLSDLLTPADDIRRRLAAAAADFVTALYNPRSERRTDLIV
                     EARRIFLAHRPPQTPVLVARALGRPGETVDITTLWDFDPASVDMLSIVLIGASTSRTL
                     TRGDGRLVAYTSRGDAAKVTS"
     gene            3726..>4349
                     /gene="cobM"
                     /locus_tag="VHZ56_01405"
     CDS             3726..>4349
                     /gene="cobM"
                     /locus_tag="VHZ56_01405"
                     /EC_number="2.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006728514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0046026 - precorrin-4
                     C11-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-4 C(11)-methyltransferase"
                     /protein_id="HEX4296654.1"
                     /translation="MTVYFIGAGPGAPDLITLRGQRLIERCPVCLYAGSLVPAEIVAA
                     TPPGARVRDTAPMHLDDIVAEMAAATARGDDVARVHSGDPSLYGAIAEQMRRLDTLGI
                     AHEIVPGVPAFAAAAARLGAELTLPDISQTVILTRTSGKASPMPPRESLEVLGAAGAT
                     LAIHLSIRNLAYVEAALTPHYGGDCPAIIVYRATWPDERIIVSTLAEM"
BASE COUNT          543 a         1913 c         1273 g          620 t
ORIGIN      
        1 cgccgcggcg gctccgccat cgccgccgcc gccctcaacg ccatcgcccg cggcctcgcc
       61 acatgatccc gtggctcgac atcgtcggcg tcaccgaatc cgagatgccg gtcatcccgc
      121 ccggtcgcac catcatcgga ccgagccgcc tgctggaccg gctggccccc gcccccgcga
      181 ccgaaggccg gggtccgccc cacgcgaaga ctgtggaatg gccttccggc ctcgacgcca
      241 tgctcgccca ggtcgaagcc caccgcggca cccccaccac catcctcgcc tccggcgatc
      301 ccctctggtt cggcatcggc tcgaccctgc ttcgccatct cgatcccgca gagatccgct
      361 tcgcccccgc tgcatcgtcg ttccagctcg ccgccgcccg cctgcgctgg ccgctccagc
      421 atgtcgcgac gctgtcgctc cacgcccgtc ccgccgagct catccacccg catatcgctc
      481 ccggcaaccg catcctggcg ctcacctccg atgccaccac cgcgccgcac gtcgcgcgcc
      541 tgctggtcga gcgcggctat ggccgctccg tcctcaccat cctcgaaaac ctcggcgccg
      601 ccgacgagcg catcgcctcc gccgccgccg ccggcttcga tctctccatc aacgacttcc
      661 acgtcctcgc tgtcgactgc gctgccgatc ccggcgcgcc gctgctggcc gccatccccg
      721 gcctgcccga cgacgccttc gtctccgatg gccagctgac caagcgcgag gtccgcgccg
      781 tcacgctcgc ccggctctcc ccctatcccg gcgcgcagct ctgggacgtc ggcgccggca
      841 gcggctcgat cggcatcgag tggatgcggg ccgcccgcga tgccaccgcc accgccttcg
      901 agcgcgaggg cgagcggctg cagatgatcg ccgtcaacgc cgcccggctg ggtgtcccgc
      961 atcttgcgat cgccccgggc gacgcccccg acacgctcca cggccatgcc gcgcccgacg
     1021 ccgtcttcct cggcggcggc gttgccgatg aaccgctgtt tcacgcctgc tggacggcgc
     1081 tgcggtccgg cggccgcttc gtcgccaacg ccgtcaccct cgatgccgag gcggcgctgt
     1141 tccgccgcca ggcgcgtctc ggcggcgagc tggtccgcat cgaaatcgcc gccctcgacc
     1201 gcatcggcga ccaccgggcg ctgcgcccgc gcctgcccgt cacccagtgg gcggtgacca
     1261 agccatgagc ggcacgctgc atctcgtcgg cgtcggccca ggcgatcccg agctcctgac
     1321 cctcaaggcc gtccgcaccc tccgcggcgc cgacgtgatc gcctacccgg tggcggggga
     1381 gggcgcgtcg ctcgccctcg ccattgccgc gcagttcgtg tcgcccatcg ccgtccgcct
     1441 gccggtcgcg ctgccgatgt cgaccgaccg cgatcccgcg caggctgcct atgatgctgc
     1501 cgccgacgcc atctttgccc acctcgcgga tggtcgtgac gtcgcctggc tctgcgaggg
     1561 cgacccgctg ttctacggct cggccatgta catgctcgcc cgcctcgcgt cgcgcgcgcc
     1621 cgtcgccatc gtccccggcg tcacctcgct cactgccgcg gccgccgcca tcgcccgccc
     1681 gctcgccgcc cgcaacgaaa tcctgaaggt gctgccggcc ccgctcgacg acgccacgct
     1741 ccgcgccgag ctgagcacgg cccccgccgt tgccatcatc aagatcggcc gccacttcga
     1801 ccgcatccgt ctgctgctcg ccgaaaccgg ccatgccgcc ggcgccgtcg tcgtcgagca
     1861 cgccaccacc gagcgccagc gcatcacccg gctcgccgat ttcgcccacg acgagcgccc
     1921 gtacttctcg accatcctct gctaccgcgg cgccgaggcc tgggcatgaa gccggccatc
     1981 gtcaccttcg ccgccaccgg cgccgagctc gcgcaacagc tcgccggcct gctcgacggc
     2041 gaaatcatcc actgcggcta caacggcgcc gatgcgaaga tcgtgctgcc gcgcctcttc
     2101 gccgacggcc gcccgatcgt cggcatctgc gccgccggca tcctcatccg cctgctcgcg
     2161 ccgcacctca gcgacaagac cagcgagccg ccggtgctcg ccgtcgccgc cgacggcgcc
     2221 cacatcgtgc cgctgctcgg cggccatcac ggcgccaatc gcctcgcccg ccggatcgcc
     2281 gaggccatcg gcggaactgc cgcgctcacc accgcctccg atgcaaaatt cacccgcggc
     2341 ctcgacgacc cgccgcccgg ctgggtgctg gccgatgccg ccgccgccaa gcccgccatg
     2401 atggcgctgc tggtcggcgg caaggtgctg ctcgaaggcc acgcgccgtg gatcgccgcc
     2461 gccggctatc ccgtctcgtt ctccggcagc gtccgcatcc gcgtcagcga ttccgtcgcc
     2521 cgccgcgagc gcgagctgct ctatcatcca aagaccctgg tcgccggcat cggtgccgag
     2581 cggggcgtcg ccgcgcccga gatcatcgcc ctcatcgagg caagcctgcg cgacgccaac
     2641 cttgcgccgg cgtccctcgt cgccctcgcc accatcgaca tcaagtccga tgaagcggcg
     2701 ttccatgctg ccgccagcca tttcggcgtg ccgctccgca tcttcaccac cggcgagctc
     2761 aaccaggagc gctaccggct gctcaatccc tcggacgtcg tcgaggccga gaccggcacg
     2821 cccggcgtcg ccgaggccgc agcgctcaag gccggcaccc tgctggtgcc caagcgcaag
     2881 tcccgccgcg ccacctgcgc catcggccgc gccccccagc ccatcgatcc gctcgccttc
     2941 ggccacgcgc cgggccggct gcatctggtc ggcgtcggcc ccggcgaccg cccgagccgc
     3001 accgccgcgg ccgtcgccgc gctcgatgcc agcgcccact gggtcggcta cggcctctac
     3061 ctcgatctcg tcgccgacct ccgcgcccgc caggaggaac accgcttccc gctcggcgac
     3121 gaggaggcgc gcgcccgcca cgccctcgag ctcgccggcc gcggccaggc ggtgtcgctc
     3181 gtgtgttcgg gcgacgcgca gatctacgcc atggcctcgc tggtcttcga gctgctcgaa
     3241 gccaccggcc cgcgccgcct cagcgacgcc gcccgtcgcg tcgccatcga cgtccacccc
     3301 ggcatatccg ccgtgcaggc cgccagcgcc gccgccggcg ccctcatcgg ccacgatttc
     3361 tgctgcatct cgctgagcga cctgctgacc ccggccgacg acatccgccg ccgccttgcc
     3421 gccgccgccg ccgactttgt aaccgcgctc tacaaccccc gctccgagcg ccgcaccgat
     3481 ctcatcgtcg aggcccggcg catcttcctc gcgcatcgcc cgccgcaaac cccggtgctc
     3541 gtcgcccgcg ccctgggccg tcccggcgaa accgtcgaca tcaccacgct ctgggacttc
     3601 gacccggcct ccgtcgacat gctgagcatc gtgctgatcg gcgcctccac ctcccgcacg
     3661 ctcacccgcg gcgacggccg cctcgtcgcc tacacctcgc gcggggacgc cgccaaggtc
     3721 acctcgtgac cgtctacttc atcggcgccg gccccggcgc gcccgacctc atcaccctgc
     3781 gcggccagcg cctcatcgag cgctgcccgg tctgcctcta cgccggctcg ctggtccccg
     3841 ccgaaatcgt cgccgccacc ccgcccggcg cccgcgtccg cgacaccgcc cccatgcatc
     3901 tcgacgacat cgtcgccgag atggcggccg ccaccgcccg cggtgacgac gtcgcccgcg
     3961 tccactccgg cgatccctcg ctctatgggg ccatcgccga gcagatgcgc cgcctcgata
     4021 cgctgggcat cgcccacgag atcgtacccg gcgtccccgc cttcgccgcc gccgccgccc
     4081 gcctcggcgc cgagctgacg ctgcccgaca tcagccagac cgtcatcctc acccgtacct
     4141 ccggcaaggc ctcgcccatg ccgccgcgcg aaagcctgga agtccttggc gccgccggcg
     4201 ccacgctcgc catccacctc agcatccgca atctcgctta cgtcgaagcc gcgctcaccc
     4261 cgcattacgg cggcgattgc ccggccatca tcgtctatcg cgccacctgg ccggacgaac
     4321 ggatcattgt cagcaccctg gccgaaatg
//
LOCUS       DATAZA010000054         1793 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_351847, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000054 DATAZA010000000
VERSION     DATAZA010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_351847"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..676
                     /locus_tag="VHZ56_01410"
     CDS             <1..676
                     /locus_tag="VHZ56_01410"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF019174.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEX4296655.1"
                     /translation="FGIMQDITERKAAEARQELLTHELEHRIKNILAMVSAIATQTLR
                     NTDIDTGREALSARLSALAAAHDILTRTRWTNAVLSEVVTSATVSLRADRIGISGPRV
                     ALEPKMALSLALAINELGTNALKYGALSNGEGRVGIEWSIDDGPGTVPELVWIWSEQG
                     GPPVAEPTRRGFGRFLIERVLAADFRGTVKLQYRPEGLVCTLRAPLPGAPRASSEEEL
                     AHARPL"
     gene            660..1037
                     /locus_tag="VHZ56_01415"
     CDS             660..1037
                     /locus_tag="VHZ56_01415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4296656.1"
                     /translation="MPAPSDAKRPAVLVVEDEALLLFSISDELKDAGFEVFDAGDADA
                     AIRLLTDHPEIAVLFTDIDMPGSMDGLRLSAFVRDRWPPVKIIVTSGKAVPSSAMLPR
                     GGVFIPKPYSPAGVTSAIHGLLG"
     gene            complement(1059..>1793)
                     /locus_tag="VHZ56_01420"
     CDS             complement(1059..>1793)
                     /locus_tag="VHZ56_01420"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEX4296657.1"
                     /translation="DRSTWTKDIVWMDRHNIAKIKDISPRGWAALCDVTGGEDRIDHK
                     IMEIESKHFTTIDSTEWSDAFVVNFRRGADQPWVKPSPEAGGWHKDGSFFRHFLDSRE
                     QGLLTIVYWSDVVPMGGGTFIAPDSIKVVARYLADHPEGIDPQSGGFGQLISECHEFE
                     EVTGETGDFIILHPFMLHASSNNHSGRVRFMTNPPVVLKEPMNLNRDDPGEFSLIERA
                     TLHALGKERYDFRPTAPRAEDWRVIG"
BASE COUNT          273 a          644 c          570 g          306 t
ORIGIN      
        1 gttcggcatc atgcaggaca tcaccgagcg caaggccgcc gaagcgcgcc aggagctgct
       61 cacccacgag ctcgagcatc gcatcaagaa tatcctcgcc atggtgtcgg ccatcgccac
      121 ccagaccttg cgcaataccg acatcgacac cggccgcgag gcgctgtcgg cccggctgag
      181 cgccctcgcg gcggcgcacg acatcctgac gcggacgcgc tggaccaatg ccgtgctgtc
      241 ggaggtggtc acctcggcga cggtgtcgtt gcgcgccgat cgcatcggca tttccggccc
      301 gcgggtcgcg ctcgagccca agatggccct gtcgctcgcc ctcgccatca acgagctcgg
      361 caccaatgcg ctcaaatatg gcgccctgtc gaacggcgag ggccgggtcg gcatcgagtg
      421 gtcgatcgac gacggccccg gcaccgtacc cgagctggtg tggatctggt cggagcaggg
      481 cggccccccg gtagccgaac cgacccgtcg aggttttggg cgcttcctca tcgagcgcgt
      541 gctcgccgcc gattttcgcg gcacggtaaa gctgcaatac cgcccggagg gcctggtctg
      601 cacgcttcgc gcgccgctgc ctggcgctcc ccgggcgtcc tcggaagagg agttggccca
      661 tgcccgcccc ctctgatgca aagcgccccg cggttctcgt cgtcgaggac gaggccctgc
      721 tgctgttctc gatttccgat gagttgaagg acgccgggtt cgaggtcttc gacgccggcg
      781 atgccgacgc cgccatccgc ctgttgaccg accaccccga gatcgccgtc ctcttcaccg
      841 atatcgacat gcccggctcg atggacgggc tcaggctgtc cgccttcgtc cgcgaccgct
      901 ggccgccggt caagatcatc gtcacctcgg gcaaggccgt cccgagttcc gcgatgctcc
      961 ccaggggcgg ggtgttcatt cccaagccct actcgccggc cggcgtgacc agcgccatcc
     1021 acggcctgct gggctagcct ccgccccccg ggccggcgct agccgatcac ccgccagtcc
     1081 tcggcccgcg gcgccgtcgg ccggaaatcg tagcgctcct tgcccagcgc atgcagcgtc
     1141 gcccgctcga tcagcgagaa ctcgccgggg tcgtcgcggt tgaggttcat cggctccttc
     1201 agcaccaccg gcgggttggt catgaaccgc accctgcccg aatggttgtt ggacgaggca
     1261 tgcagcatga aggggtggag gatgatgaag tcgccggtct cgccggtcac ctcctcgaac
     1321 tcgtggcact ccgagatcag ctggccgaag ccacccgatt gcgggtcgat cccttccgga
     1381 tggtcggcga gatagcgcgc caccaccttg atcgaatccg gcgcgatgaa ggtgccgccg
     1441 cccatcggca ccacgtccga ccagtagacg atggtcagca gcccctgttc gcggctgtcg
     1501 aggaaatgcc ggaagaagct gccgtccttg tgccagccgc ccgcctccgg cgacggcttc
     1561 acccagggct ggtcggcgcc gcggcggaaa ttcaccacga acgcgtccga ccactccgtc
     1621 gaatcgatgg tggtgaaatg cttggactcg atctccatga tcttgtggtc gatgcggtcc
     1681 tcgccccccg tcacgtcgca cagcgccgcc cagccccgcg gcgagatgtc cttgatcttg
     1741 gcgatgttgt gccggtccat ccagacgatg tccttggtcc aggtcgagcg gtc
//
LOCUS       DATAZA010000055         2885 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3137328, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000055 DATAZA010000000
VERSION     DATAZA010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2885)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2885)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2885
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3137328"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..369
                     /locus_tag="VHZ56_01425"
     CDS             <1..369
                     /locus_tag="VHZ56_01425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007767177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEX4296658.1"
                     /translation="AGGMGETKRISHLAHWHMIPVAPHNPVGPVMNAMTLHLSVAVPN
                     FTIFETVSVDVPWRKELVQETLVFERGDILAPTAPGLGVELNEAACARYPYKAFDVPL
                     FDGSINVAGVAKGDAVMGQK"
     gene            483..1625
                     /locus_tag="VHZ56_01430"
     CDS             483..1625
                     /locus_tag="VHZ56_01430"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007767186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008927 - mannonate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006064 - glucuronate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HEX4296659.1"
                     /translation="MRVGLTLSGDNLTSDGARFASQLGVTDVVVHLNTYGKGTAQEVA
                     AYASGAVGPPNAPVIDEPLWDYEKMSGVVAMLAEHGLRVAALENFSPKFWSDVLLDGP
                     AKRQQMEGLKRLVRDAGRAGIPVIGYNFSLAGVWGWQRRPAARGGAMTVGFDMSAFDH
                     AEPIPDGMIWNMRYREPVAGARPVTVSHAELWQRLEWFLRELVPVAEEAGVRLAAHPD
                     DPPAEFLRGTARLVNTHGKYDRLLELVPSPANALEFCIGSLAEMPEGDIYETTRHFAR
                     RGALAYVHFRNVRGKVPHYVETFIDEGDVDMTEIVRILRDENYDGVLVPDHVPDLHGS
                     KSPWHAGNAYTIGFMRALVLNQDSLGPSRSAGAPKQNNRAAVVAAE"
     gene            1693..>2885
                     /locus_tag="VHZ56_01435"
     CDS             1693..>2885
                     /locus_tag="VHZ56_01435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007767188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HEX4296660.1"
                     /translation="MKLKTITAALTLAVSTLTLTGVAFAGDVVWWTPNWSQARAQKLA
                     DDFHAANPDINIKLQITTSNGLPQQVMTALQSGSGPDIIEVQHGWVAGYAQNDLVLPL
                     DDTIQDKDDYNKAVIAEDTYQGKLYAIPYRIECTALIYNLADYTAAGLDPANPPQTWD
                     DWVAASKKMTANGVYGMAITGGGEFGNTITRALPLVWMNGGDIISADGKTAVINSPEA
                     VAAIKFYTDFYTNKISPDSTLQNDGVADRQLFVAGKVASYLTGQYDIAPIAQAAPDLK
                     IGAFMTPHPAGKQTAGILNGWSYVIPKDAQNPTDAKKFLQFLNTKDNMGFFTDTFPAR
                     VSSLSLPRFQDPLLKPFAGMLQYGRPTPITPHWVEISQAMFNGIQRILAGQQDPQAAM
                     DQANQ"
BASE COUNT          525 a          935 c          964 g          461 t
ORIGIN      
        1 gccggcggca tgggcgagac caagcgcatc agccatctcg cgcactggca catgatcccg
       61 gtggcgccgc acaatccggt ggggccggtg atgaacgcca tgacgctgca tctgagcgtg
      121 gcggtgccga acttcacgat cttcgagacg gtgagcgtcg acgtgccgtg gcgcaaggaa
      181 ctggtgcagg agacgctggt gttcgagcgc ggcgatatcc tcgcgccgac ggcgccgggg
      241 ctcggcgtcg agctcaacga ggcggcgtgc gcgcgctatc cctacaaggc cttcgacgtg
      301 ccgctgttcg acggctcgat caatgtcgcg ggcgtcgcca agggcgatgc ggtgatgggg
      361 cagaagtagg cgggcggctt gattgacagg ctccaagtcc tgtcgcatgg ttatgtatcg
      421 aattgctgca gttcatatgt gaactgattg gacggcaagt ccatggcgat cgggaggagc
      481 ggatgcgggt cggtctcacc ctcagcggtg acaacctcac gagcgacggc gccaggtttg
      541 ccagccagct cggggtgacc gatgtcgtcg tccacctcaa cacctacggc aagggcacgg
      601 ctcaagaggt cgccgcctat gcctccgggg ctgttggccc gcccaacgcc ccggtgatcg
      661 acgagccgct ctgggactat gagaaaatgt ccggggtggt ggcgatgctg gctgagcatg
      721 gcctgcgcgt tgcggcgctg gagaatttct cgccgaaatt ctggtcggac gtgctgctcg
      781 acggtcccgc caagcgccag cagatggagg ggctcaagcg cctcgtccgg gatgccggcc
      841 gggccggcat tccggtcatc ggctacaatt tctccctggc cggcgtgtgg ggctggcagc
      901 ggcggcccgc ggcgcgtggc ggcgcgatga ccgtcggctt cgacatgtcg gccttcgacc
      961 atgccgaacc gatcccggac ggcatgatct ggaacatgcg gtatcgcgag ccggtggccg
     1021 gcgcgcggcc cgtgacggtg tcgcatgccg agctctggca gcggctcgag tggtttctcc
     1081 gcgagctggt gccggtcgcg gaggaggcag gcgtcaggct ggccgcgcat cccgacgatc
     1141 cgccggcgga gttcctgcgc ggcacggcgc ggctggtcaa cacccatggc aagtacgacc
     1201 ggctgctcga gctggtgccg tcgcccgcca atgcgctcga attctgcatc ggctcgctgg
     1261 cggagatgcc ggagggcgac atctacgaga cgacgcggca ctttgcccgc cgcggtgcgc
     1321 ttgcctatgt gcatttccgc aatgtccgcg gaaaggtgcc gcattatgtc gagaccttca
     1381 tcgacgaagg cgacgtcgac atgacggaga tcgtgcggat tctccgtgac gagaactacg
     1441 acggcgttct ggtgcccgac catgtgcccg acctgcacgg ttcgaaatcg ccgtggcatg
     1501 ccggcaacgc ctacaccatc gggttcatgc gggcgctggt gctcaaccag gattcgcttg
     1561 gcccgtcgcg ctcggcgggc gcaccgaaac agaacaatcg cgccgcggtc gtcgcggcgg
     1621 aatgaagacc gcggccaggt cggccggcgg aaagcaagaa cgcggccccg cggtcgcctt
     1681 tgggaggacg atatgaagct caagaccatc acagccgcgc tgacgctggc tgtctcaacg
     1741 ttaacgctga ccggagtggc gttcgccggc gatgtcgtct ggtggacgcc gaactggagc
     1801 caggcgcggg cgcagaagct cgccgacgac ttccacgcgg ccaatccgga catcaacatc
     1861 aagctgcaga tcaccaccag caacggcctg ccgcagcaag tgatgacggc gctgcagtca
     1921 ggctcgggcc ccgacatcat cgaggtgcag cacggctggg tcgcgggcta cgcgcagaac
     1981 gatctggtgc tgccgctcga cgatacgatc caggacaagg acgactacaa caaggcggtg
     2041 atcgccgagg acacctacca gggcaagctc tacgccattc cctatcgcat cgagtgcacg
     2101 gcgctgatct acaacctcgc ggactacacc gcggcagggc tcgatccggc caacccgccg
     2161 cagacctggg acgactgggt ggcggcttcc aagaagatga ccgccaacgg cgtctacggc
     2221 atggcgatca ccggtggcgg cgagttcggc aacaccatca cccgcgcgct gccgctggtc
     2281 tggatgaatg gtggcgacat catctccgcc gacggcaaga cggcggtgat caactccccc
     2341 gaggccgtcg ctgcaatcaa gttctacacc gatttctaca cgaacaagat ctcccccgac
     2401 tcgacgctgc agaacgacgg cgtcgccgac cggcagctgt tcgtcgccgg caaggtggcg
     2461 agctatctga ccggacagta cgacatcgcg ccgatcgcgc aggcggcgcc cgatctcaag
     2521 atcggagcgt tcatgacgcc gcatccggcc ggcaagcaga cggccggcat cctcaacggc
     2581 tggagctacg tcatccccaa ggatgcgcag aatccgaccg acgccaagaa gttcctgcag
     2641 ttcctcaaca ccaaggacaa catggggttc ttcaccgaca ccttccccgc ccgcgtctcg
     2701 tcgctgagcc tgccgcgctt ccaggatccg ctgctgaagc cgttcgcggg catgctgcaa
     2761 tatgggcgcc cgacgccgat cacgccgcac tgggtggaga tcagccaggc gatgttcaac
     2821 ggcatccagc gcatcctcgc cggccagcag gacccgcagg cggcgatgga ccaggcgaac
     2881 cagga
//
LOCUS       DATAZA010000056         1855 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1512433, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000056 DATAZA010000000
VERSION     DATAZA010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1855
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1512433"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(193..1035)
                     /locus_tag="VHZ56_01440"
     CDS             complement(193..1035)
                     /locus_tag="VHZ56_01440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296661.1"
                     /translation="MSAPNGKFEFDAGALTLPSSTFMARAAGTLTLPLGDTFGLQADF
                     AAATAPGFNTSAALHVFTRDPQSYLIGGTLGIVRTPGAEVVAAGPEAELYAGRWTIEA
                     WGGLAVAHHFAPATDHVGAFAMATLAYYLDDNLRLTAGVSSLDGFNAVHFGAEYLLDG
                     FSLPVAVVGDARIGQDGSLQATIGLRGYIGAPGKSLIRRHREDDPDDQGTALIAAVGS
                     PAHSHSQGSGSGGSGSGGDTAGSGDGGSAGSGDGGSAGQTAADCSPLQYFDGVSCVTA
                     FTGP"
     gene            1364..>1855
                     /locus_tag="VHZ56_01445"
     CDS             1364..>1855
                     /locus_tag="VHZ56_01445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1796 family putative cysteine peptidase"
                     /protein_id="HEX4296662.1"
                     /translation="MRQSFDYAISLGSSCRARHQLVRVYGKDACPSGIFDWQGTSAAA
                     VAAYLRHDFAGMFELEDLRIEGGMVRNFRYGTWHLHQFPKGIGVEDIAAHYPEARSRH
                     DHLSQKTLRLLRGRDRLLLCLNRHLSPVHWARLWLQLRLRYPQLSFILLNGPKGDFPA
                     DVRW"
BASE COUNT          310 a          614 c          654 g          277 t
ORIGIN      
        1 gtgtcggaag cgcggtaggt catgacggtc tcccggagat cgcagcagaa tgaggggccc
       61 gccgctcagg cggccgcaac aaagcccggt ggtttgccgg gcggacactg ccgcaaagcc
      121 ggcgcggctt caagcaaagc catgcttgtc cggggaggtc cgcgacgatt gccggcttga
      181 actgtttggc gatcaggggc cggtgaaggc agtgacgcag gagacaccgt cgaaatattg
      241 gagcggcgaa caatccgctg ctgtttgacc agccgagcct ccatcgccgc tgccggccga
      301 gcctccgtcg ccgctgccgg cagtgtcccc gccggagccg gagccgcccg acccgctgcc
      361 ctgcgaatgg ctgtgcgccg ggctgccgac cgcggcgatg agggcggtgc cctggtcatc
      421 ggggtcgtcc tcgcggtggc ggcggatcag cgacttgccc ggggcgccga tgtagccgcg
      481 cagcccgatg gtggcctgca acgagccatc ctggccgatc cgcgcgtcgc cgaccactgc
      541 gaccggcagg ctgaagccgt cgagcaggta ctcggcgccg aaatgcacgg cattgaagcc
      601 gtcgagcgag gagactcctg cggtgagccg caggttgtcg tcgaggtaat aggccagcgt
      661 cgccattgcg aaggcgccga catggtcggt ggccggggcg aagtgatgcg ccacggcgag
      721 cccgccccag gcctcgatgg tccagcgtcc ggcgtagagc tcggcctccg gcccggcggc
      781 gaccacctcg gcgccagggg tgcgcacgat gccgagggta ccgccgatga ggtagctctg
      841 cggatcgcgg gtgaacacgt gcagcgccgc gctggtgttg aagccgggcg ccgtggccgc
      901 ggcgaagtcg gcctgcagcc cgaaggtgtc gccgagcggc agggtcagcg tgccggcagc
      961 gcgcgccatg aaggtgctgg acggcagcgt cagggcgccg gcgtcgaact cgaacttgcc
     1021 gttcggcgcc gacaccgccg ggccggcagc aatggccggt gcggattgca aacaacaaag
     1081 caacagcacc gccgaaccag cggtgccaaa ccatccaagc cgcgccaaga gagcccccaa
     1141 ggcaatcgtc gcaacagtcc ttaagtatta atacaaagtt aaagcaccat cgattgaggg
     1201 ccgcaagagg aaagctcgag gccgcgccgg ctcggcagcc aaagactcgc gtcgagcctc
     1261 ctgcggctcc cgatgactgg cctcagtcac gcgttgcaga gccgttgcag gacgcctccg
     1321 atggcttgcc gccggcatcg cggcaggact agactcggcg gtcgtgcgcc agagcttcga
     1381 ttacgccatc agtctcggat cgagttgccg ggcgcgccac caactggtgc gcgtctacgg
     1441 caaggacgcc tgtccgtcgg gcatcttcga ttggcagggc acgtcggcgg cggcggttgc
     1501 ggcgtacctg cggcacgatt ttgccggcat gttcgaactc gaggatctgc gcatcgaggg
     1561 gggcatggtg cgcaatttcc gctacgggac ctggcacctc caccagttcc ccaagggaat
     1621 cggggtcgag gacatcgcgg cgcactatcc cgaggcgcgc tcgcgtcatg accatttgag
     1681 ccagaagacc ctgcggctgc tgcgcgggcg cgaccggctg ctgctgtgcc tcaaccgcca
     1741 cctgtcgccg gttcactggg cccggctctg gctgcagttg cgcctgcgct acccgcagct
     1801 gagcttcatc ctgctcaacg gcccgaaggg cgactttccg gccgacgtgc gctgg
//
LOCUS       DATAZA010000057         4348 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1280799, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000057 DATAZA010000000
VERSION     DATAZA010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4348
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1280799"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..337
                     /locus_tag="VHZ56_01450"
     CDS             <1..337
                     /locus_tag="VHZ56_01450"
                     /inference="COORDINATES: protein motif:HMM:NF019305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cobyric acid synthase CobQ"
                     /protein_id="HEX4296663.1"
                     /translation="MKILQETSGRTAAGVMVRGYHMHMGSTAGPDCAAPFAILDGRPD
                     GATRGTVTGTYLHGVFASAALRDSFLHIAEISVLDHDSIVESTLDALAAHLAAHLDLD
                     ALLALAVTL"
     gene            337..1290
                     /gene="cbiB"
                     /locus_tag="VHZ56_01455"
     CDS             337..1290
                     /gene="cbiB"
                     /locus_tag="VHZ56_01455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006203280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016880 - acid-ammonia (or amide) ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-phosphate synthase CbiB"
                     /protein_id="HEX4296664.1"
                     /translation="MAWLVAPLALVIERLVGYPGGLFRIIGHPVTWMGALIGWLEGRL
                     NTGDQRRWKGVALLVLLLVSGLVVSLLILDVTRRIPFGWAIEALLASTLLAQKELGRA
                     VTAVADGLAVSLEAGRAAVSHIVGRDPDALDRPGVARAAIESLAESTSDGIVAPLFWL
                     LVGGLPGIVLYKAVNTADSMIGHRTPRYAEIGWASARLDDLLNWIPARLTALLVAGAA
                     FLVRRADPEAAWSTALRDARQHASPNAGWPEAAFAGALGFVLGGPRAYDGEVHDLPSF
                     GDGRTDLSALDILKSLELYWRTLNLLLAVTLLCAVLLWRFA"
     gene            complement(1297..1857)
                     /gene="cobU"
                     /locus_tag="VHZ56_01460"
     CDS             complement(1297..1857)
                     /gene="cobU"
                     /locus_tag="VHZ56_01460"
                     /EC_number="2.7.1.156"
                     /EC_number="2.7.7.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0043752 - adenosylcobinamide kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adenosylcobinamide
                     kinase/adenosylcobinamide-phosphate guanylyltransferase"
                     /protein_id="HEX4296665.1"
                     /translation="MGGHVLVLGGARSGKTGFAERLAMHAGETPLYLATAQALDTEMR
                     ERVKLHQQQRHKRFATLEEPLALSTALKAAARTHDVILVDCLTLWITNLLGAGSNVAA
                     AVDELAATLAAIDGARVILVSNEVGLGIVPDNAMARMFRDLAGAAHQRLAEICSEVHF
                     VVAGLPMTLKGPRLTESTTELPRPEG"
     gene            2113..3042
                     /locus_tag="VHZ56_01465"
     CDS             2113..3042
                     /locus_tag="VHZ56_01465"
                     /inference="COORDINATES: protein motif:HMM:NF013986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /protein_id="HEX4296666.1"
                     /translation="MTRYYLGVDGGGTNCRIRLTDESLATLGEGSGGRSNLQIENGEP
                     AFRSIADGTRQAFAQAGIDYSETKNTYACFGMAGGRLTTDRVAFQQRPWPFAAVKVYD
                     DIDIARAGAHAGADGAVIIAGTGSAALAIVDGQRHQCGGWGFHIGDQMSGAILGRELV
                     RRTVEATDGLVAGSSLTVAVLARFGGTVDAIMDWSFPKEDHPAPAATGGTPQSLLGRA
                     PAEYGALMPMLFDYYDRGDPVARELIDLEMTYIDNYVRWFQARGVDKLAAVGGVGTRL
                     LPQMTARYGAFITTPLHEPLHGAVILAKQNFAA"
     gene            3039..>4348
                     /gene="zwf"
                     /locus_tag="VHZ56_01470"
     CDS             3039..>4348
                     /gene="zwf"
                     /locus_tag="VHZ56_01470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEX4296667.1"
                     /translation="MNYIDKRQKSVSSRIIPVQPFDYVVFGATGDLTKRKLIPALYHR
                     FKDGQFDERCRIIGVSRTKWSDDDFRNAARQDIANFVEKEYQDEKVIERFVSTFCYVV
                     NDVTDESKWGDLSTKLRDDPKIVRAFYMAIAPDLFGPTCEYISKQGYYRRDARVVIEK
                     PLGHDLQSSMEINDEVSRIFQEDQVYRIDHYLGKETVQNLLALRFANILFEPVWNSAH
                     IDHVQITVAETVGAGTRGYYDESGALRDMVQNHMLQLLCLVAMEPPASDDANALRDEK
                     LKVLRSLKPIRGGDTGRVTVRGQYRGGSIDGQSVQSYQDELPADKKGSRTETFVALKA
                     ELENWRWSSVPFYFRTGKRLPSRASEIVIQFRNIPHSMFDHAEGAPRPNRLIINIQPD
                     ETVQLFLMMKDPGPGGMRLREAPLDLSFAQTFHERTPEAYERLLL"
BASE COUNT          679 a         1572 c         1384 g          713 t
ORIGIN      
        1 catgaagatc ctgcaggaga cgtcaggtcg aaccgcggcg ggtgtcatgg tgcgcggcta
       61 ccacatgcac atgggctcga cggccggccc ggactgcgcc gcgcccttcg cgatcctcga
      121 tggtcgcccc gacggcgcca cccgtggcac cgtcacggga acgtatctgc atggggtatt
      181 tgcatcggcc gcattgcgag attcattttt gcatatcgcc gagatttccg tgctcgatca
      241 cgactcgatc gtggaaagca ccctggacgc cctcgccgct cacctcgcag ctcacctcga
      301 cctcgatgcg ctgctggccc tcgcggtgac actctgatgg cctggctggt cgccccgctg
      361 gcgttggtca tcgagcgtct cgtcggctat cccggtggcc tgttccggat catcggccac
      421 cccgtgacct ggatgggtgc cctcatcggc tggctcgagg gccggctgaa caccggcgac
      481 cagcgccgct ggaagggcgt ggcgctgctc gtcctgctgc tggtgagcgg gctcgtggtg
      541 tcgctgctga tcctcgacgt cacccgccgc atccccttcg gctgggcgat cgaggcgctg
      601 ctggcctcga ccctcctggc gcaaaaggag ctcggccgcg ccgtcaccgc ggtggccgac
      661 ggtctcgcgg tctcgctcga ggcgggccgc gccgcggtca gccacatcgt cggccgcgat
      721 cccgatgcgc tcgatcgtcc gggcgtcgcc cgcgcggcga tcgagagcct cgccgaatcg
      781 acgtccgacg gcatcgtcgc gccgctgttc tggctgcttg tcggcgggtt gccgggcatc
      841 gtgctctaca aggccgtcaa caccgccgat tcgatgatcg gccaccgcac gccgcgctat
      901 gccgagatcg gctgggccag cgcccgcctc gacgacctgc tcaactggat cccggcgcgc
      961 ctcaccgcat tgctggtcgc cggcgctgcg ttcctcgtcc gccgcgccga tccggaagcc
     1021 gcctggtcca cggcgctgcg cgatgcgcgc cagcacgcgt ccccgaacgc cggctggccc
     1081 gaggcggcct tcgccggtgc ccttggcttc gtgcttggcg gcccgcgggc ctacgacggc
     1141 gaggtccacg acctccccag cttcggcgac gggcgcaccg acctgagcgc gctcgacatc
     1201 ctcaaatcgc tcgaactcta ctggcggacg ctcaacctgc tgctggcggt caccctgctg
     1261 tgcgccgtgc tgctctggcg ctttgcatag gccgcctcag ccttcgggcc ggggcagttc
     1321 ggtcgtgctt tccgtgagcc tcgggccctt gagcgtcatc ggcaggccgg caacgacgaa
     1381 gtgcacctcg ctgcagatct ccgccagccg ctgatgcgcc gctccggcga gatcgcgaaa
     1441 catccgcgcc atggcgttgt cgggcacgat gccaaggccg acctcgttgg agaccaggat
     1501 gacccgggca ccgtcgatcg cagccagcgt cgcggcgagc tcgtcgacgg ccgcggcgac
     1561 gttgctgccc gccccgagca ggttggttat ccacagcgtc aggcagtcga cgagaatgac
     1621 atcgtgcgtc cgcgccgcgg ccttcagcgc cgtcgacagc gccagcggct cctccagggt
     1681 ggcgaaccgc ttgtgccgct gctgctggtg gagcttcacg cgctcccgca tttcggtgtc
     1741 gagcgcctgc gccgtcgcca aatagagagg cgtctcgccg gcatgcatcg ccaggcgttc
     1801 cgcaaacccg gtcttgcccg accgcgcgcc tcccagcacc aagacgtgtc cgcccatgcc
     1861 gcttctccgc tcctcgtcga atgcggcacc gtaagtccgg ttgcctcgcg cgtcacgcga
     1921 ctccgtcgga ccccgacccg ccggacagcg ccgcggagct atgcatcagg cccgcagcgc
     1981 cctgctgaaa tcgattgcct attgggcttt cgtcccgcta ccgttggctc tatggtccgc
     2041 cgcgccggac ggccaagcgg ccttcgaggc ggcgcggttt ggcaggaatc gcggcaaaac
     2101 cggggttggc aggtgaccag atactatctt ggcgtcgacg gcggcggcac caattgccga
     2161 atccggctga ccgacgagag cctggcgacg ctcggggagg ggtcgggcgg gcgctcgaac
     2221 ctgcagatcg agaatggcga accggccttc cgctcgatcg ccgacggcac ccgccaggcc
     2281 ttcgcccagg cggggatcga ctactccgag acgaaaaaca cctacgcctg cttcggcatg
     2341 gcgggcggca ggctgaccac cgaccgggtg gccttccagc agcgcccctg gccgttcgcg
     2401 gcggtaaagg tctatgacga catcgatatt gcccgggccg gggcgcacgc cggcgccgac
     2461 ggcgcggtga tcatcgccgg caccggctcg gccgccctcg ccatcgtcga cggccagcgg
     2521 caccagtgcg gcggctgggg gttccatatc ggcgaccaga tgtcgggcgc catcctcggc
     2581 cgcgagctgg tccgccgcac cgtcgaggcc accgacgggc tggtcgccgg ctcgtccctg
     2641 accgtcgccg tgctcgcccg tttcggcggc accgtcgatg ccatcatgga ctggtccttt
     2701 cccaaggagg accatcctgc cccggcggcg accggcggca ccccgcagag cctcctcggc
     2761 cgcgcaccgg ccgaatacgg cgcgctgatg ccgatgctgt tcgactacta cgacaggggc
     2821 gaccccgtgg cgcgcgaact catcgatctc gaaatgacct acatcgacaa ctatgtccgc
     2881 tggttccagg cccgcggcgt cgacaagctc gccgccgtcg gcggcgtcgg cacccgcctg
     2941 ctgccgcaga tgaccgcgcg ctacggcgcc ttcatcacca ctcccctgca tgagcccctg
     3001 catggggccg tcatcctcgc aaagcagaac ttcgccgcat gaactacatc gacaagaggc
     3061 aaaagagcgt gtccagccgc atcattcccg tccagccctt cgactatgtg gttttcggcg
     3121 ccaccggcga cctcaccaag cgcaagctca ttccggccct ctaccaccgc ttcaaggacg
     3181 gccagttcga cgagcggtgc cggatcatcg gcgtctcgcg caccaagtgg agcgacgacg
     3241 atttccgcaa cgcggcgcgc caggacatcg ccaatttcgt cgagaaggaa taccaggacg
     3301 agaaggtcat cgagcggttc gtgtcgacct tctgctacgt cgtcaacgac gtcaccgacg
     3361 agagcaagtg gggcgatctg tcgaccaagc tgcgcgacga tcccaagatc gtccgcgcct
     3421 tctacatggc catcgcgccg gacctgttcg gaccgacctg cgaatacatc tccaagcagg
     3481 gctactaccg ccgcgacgcc cgggtggtga tcgaaaagcc gctcggccac gacctgcagt
     3541 cctcgatgga gatcaacgac gaggtctccc gcatcttcca ggaagaccag gtttaccgca
     3601 tcgaccacta cctcggcaaa gagacggtgc agaacctcct ggcgctgcgc tttgccaaca
     3661 tcctgttcga gccggtgtgg aattcggcgc acatcgacca cgtgcagatc accgtggccg
     3721 agaccgtcgg cgccggcacc cgcggctatt acgacgagag cggcgcgctg cgcgacatgg
     3781 tgcagaacca tatgctgcag ctgctctgcc tcgttgccat ggagcccccg gcgtccgacg
     3841 acgccaacgc gctgcgcgat gaaaagctga aagtgctgcg ctcgctgaag ccgatcaggg
     3901 gcggcgacac cggccgcgtc acggtgcgcg gccagtaccg cggcggctcg atcgacggcc
     3961 agtcggtgca gagctaccag gacgagctgc ccgccgacaa gaagggttcg cgcaccgaga
     4021 ccttcgtcgc cctcaaggcc gagctcgaga actggcgctg gtcctcggtg ccgttctact
     4081 ttcgcaccgg caagcggctg ccatcacgcg cctccgagat cgtcatccag ttccgcaaca
     4141 ttccgcactc gatgttcgat cacgccgagg gcgcgccgcg gcccaatcgg ctgatcatca
     4201 acatccagcc ggacgaaacg gtgcagctgt tcctgatgat gaaggacccg ggaccgggcg
     4261 gcatgcggct gcgtgaggcg ccgctcgatt tgagcttcgc ccagaccttc cacgagcgca
     4321 cccccgaggc ctacgagcgg ctgctgct
//
LOCUS       DATAZA010000058         2740 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3718003, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000058 DATAZA010000000
VERSION     DATAZA010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3718003"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..935
                     /locus_tag="VHZ56_01475"
     CDS             <1..935
                     /locus_tag="VHZ56_01475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007696114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HoxN/HupN/NixA family nickel/cobalt transporter"
                     /protein_id="HEX4296668.1"
                     /translation="AFSSQPVLMGTAFLAYVFGLRHAFDADHLAAIDNVVRKLMQQGQ
                     RPLGVGFFFSLGHSTVVVVASAVIAASAAAVQGQLDSIHEIGGVVGTLVSAFFLLAIG
                     LANLLVLRGIWAAFRRVRAGGRLVDEDLDAMLAGRGLLARVFRPVFGLVRSSWHMYPV
                     GLLFGLGFDTATEIGLLGISAMQAAAGMNFWTIMVFPALFTAGMALMDTTDSVAMVGA
                     YGWAFVNPVRKLWYNLTITAASVAVAIFIGGVEALGLVGDRLSLSGGFWDVIGSLNGN
                     LTSFGYAVVGVFLVSWLVSTLIYRANRYDDLARG"
     gene            1280..1510
                     /locus_tag="VHZ56_01480"
     CDS             1280..1510
                     /locus_tag="VHZ56_01480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296669.1"
                     /translation="MTRIRYDIIPQGGGWSIAMGGAVGPPYSTLDDAVRDTENVASLL
                     VESGDAVDIVVWQGGTPVLLETLAGDPRRARH"
     gene            complement(1819..>2740)
                     /locus_tag="VHZ56_01485"
     CDS             complement(1819..>2740)
                     /locus_tag="VHZ56_01485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="EmrB/QacA family drug resistance transporter"
                     /protein_id="HEX4296670.1"
                     /translation="QLLLDRGADNFWFESTETWIELGLVITGLWVFVIHCLTAENPFI
                     DLRIFKDLNFTLGSVFMFIVGITLFSGLALLPPLLQNLMGYPVIFSSVIMAPRGLATM
                     ASMVIVGRMTGKVDARIMMLFGIGMMAYSLYSMTGFDLQMDYWPVIITGCIQGFGMGF
                     LFVPLSTMAFATIAPKFRADGTAMFSLVRNMGQGVGISLVTAVLATMLQVNHAELGER
                     LTATSQNVVNQMPSLLSGNPTITSLIDGLVSQQAAMLSYLDDFWLMMLMSLSAIPLIL
                     LLRSPKKPPVTAKPKTDEEKALERAHAMAE"
BASE COUNT          450 a          899 c          894 g          497 t
ORIGIN      
        1 tcgctttttc cagccagccg gtgctgatgg gcaccgcctt cctcgcctat gtgttcggcc
       61 tgcggcacgc cttcgatgcc gatcaccttg ccgccatcga caacgtcgtg cgcaagctca
      121 tgcagcaggg gcagcgcccg ctcggggtcg ggttcttttt ttccctcggc cactcgacgg
      181 tcgtcgtcgt cgcctcggcg gtcatcgccg ccagcgccgc ggcggtgcag ggccagctcg
      241 attcgatcca cgagatcggc ggcgtcgtcg gcacgctggt ctcggccttc ttcctgctcg
      301 ccatcgggct tgccaatttg ctggtgctgc gcggcatctg ggccgccttc cggcgggtcc
      361 gcgccggcgg ccggctggtc gacgaggacc tcgacgccat gctggcggga cgcggcctgc
      421 tggcgcgcgt gttccggccc gtgttcggcc tggtgcgcag ctcctggcac atgtacccgg
      481 tcggtctgct gttcgggctc ggcttcgata ccgcgaccga gatcgggctg ctaggcatct
      541 ccgccatgca ggccgcggcc ggcatgaatt tctggaccat catggtgttc ccggcactgt
      601 tcaccgccgg catggcgctg atggacacca cggactcggt ggccatggtc ggcgcctatg
      661 gctgggcctt cgtcaatccg gtgcgcaagc tctggtacaa tctgaccatc accgccgctt
      721 cggtggccgt cgccatcttc atcggcggcg tcgaggccct gggcctcgtc ggcgacaggc
      781 tcagcctgtc gggcggcttc tgggacgtga tcggcagcct caacggcaac ctgaccagtt
      841 tcggctacgc cgtggtcggc gtgttcctcg tgagctggct ggtctcgacg ctgatctacc
      901 gcgccaaccg ctacgacgac ctggcgcgcg gctgaggtca aaaagaaagg gccgcccaga
      961 ggcggcccgt tcccgatttc gcgatttggt caggtctccg gagccggagc tcccagacct
     1021 tgcgactacg acagaggctg ctccgtcacc aagcgcaccg atccaagacc tttcgaaacc
     1081 ggcgatttct gatgtgacat tggatcacct cctctcgttg cgttgaactc ttcacgaagt
     1141 tgggcgaatt ccgcggcctt ggcaagcgcc aattcgccgc gccctgccgg acggaggccg
     1201 gcacaaaatc gtcgccatga cgaaacctgc tcggggacgg cgcattaaga gagcaggcgt
     1261 catcccggag ctcggccaaa tgacgcggat caggtacgac atcattccac agggcggcgg
     1321 ctggagcatc gcgatgggcg gcgccgtggg ccctccctat tccacgctgg acgacgcggt
     1381 gcgcgacacc gagaacgtcg cctcgctgct ggtcgagtcg ggcgacgccg tggacatcgt
     1441 ggtctggcag gggggcacgc ccgtgctgct cgagacgctg gcgggcgatc cgcgccgggc
     1501 gcggcactag gtctttaccg ttcgctaacc ataacccgtc aggattcaca cgtagccgat
     1561 ggagttgcgt gatgagcgat ctgttgcaga cgggatggct ggtggtgctg atgctgaccg
     1621 tgatcgccat gccgatcctg atgctgaccg gccagctgta atctggcgcc gagcgcctcg
     1681 gccgacccag gaccagaggc tgccgtatcc cccgagctgt cgtgaaaagc gaggcgggtg
     1741 gggccgccga gtgcatggga tcgccccacc ccgtctcgca tcggacccgg cagcaaagcc
     1801 ggatcctgtc tcaggatttt attcggccat cgcgtgggcg cgctcgaggg ccttttcctc
     1861 gtcggtcttc ggcttggccg tcaccggcgg cttcttcggg ctgcgcagca gcaggatcag
     1921 cgggatggcg ctgaggctca tcagcatcat cagccagaag tcgtcgaggt agctcagcat
     1981 cgccgcctgc tgcgacacca gcccgtcgat cagcgacgtg atcgtcgggt tgccgctcaa
     2041 cagcgacggc atctggttga ccacgttctg cgacgtcgcc gtcagccgct cgccgagttc
     2101 ggcgtggttg acctgcagca tggtcgccag caccgccgtc accagcgaga tgccgacgcc
     2161 ctgccccatg ttgcgcacca gcgagaacat cgcggtgccg tcggcgcgga acttcggcgc
     2221 gatggtggcg aacgccatgg tcgacagcgg cacgaacagg aagcccatgc cgaaaccctg
     2281 gatgcaaccg gtgatgatca ccggccagta gtccatctgc aggtcgaagc cggtcatcga
     2341 gtagagcgaa tacgccatca tgccgatgcc gaagagcatc atgatgcggg cgtcgacctt
     2401 gccggtcatc cggcccacga tcaccatcga ggccatcgtc gcgaggccgc gcggcgccat
     2461 gatgaccgag gagaagatca ccgggtagcc catcaggttc tgcagcagcg gcggcagcag
     2521 cgccaggccc gagaacagcg tgatgcccac gatgaacatg aacaccgagc cgagcgtgaa
     2581 gttgagatcc ttgaagatgc gcaggtcgat gaacggattt tccgccgtca ggcaatggat
     2641 gacgaacacc cacaggccgg tgatcacgag gccgagctcg atccaggttt cggtcgattc
     2701 gaaccagaaa ttgtcggcac cgcggtcgag cagcagctgc
//
LOCUS       DATAZA010000059         2870 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3137712, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000059 DATAZA010000000
VERSION     DATAZA010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2870
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3137712"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..1399
                     /locus_tag="VHZ56_01490"
     CDS             113..1399
                     /locus_tag="VHZ56_01490"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX4296671.1"
                     /translation="MRNLATMAMAGALLAFGAIGMAAPAAADTVNLTLRHCWGGDAEM
                     AAMQKVVDKWNAANPDIQVKSIGGSIDAEEITADAAGGNPPDMVIMCDNSAVAGFAHD
                     GVIAPLDDLLTTIGADTSDIIPSSLAWTQYNGKQYGLPYGQDTYALYYDVDAFKAAGI
                     AGPPKTMDELWDDAAKLTTWKADGTLARAGFIPNDPYKNTEQTSAFFDCQFYDTATKK
                     VTVNSPACVAWLQWYKKWYDTYNKNNAMVNLIASRTGGDAGLLISGQQAMGIYGEWNT
                     GAAYIPVVAPNLHYDTAPVPSQDPALYGAGFMNGNAFMIMAGSKHQEESMKFGMYLMS
                     DDASKVMILQNSSVPQLKSLLVDKDLTSIPHFTAFLQIAAFPTSWTTPMFSAYSELVD
                     GLNTSLDAVLTGGADPKQQLDQLAASIQAKVDANGG"
     gene            1506..2852
                     /locus_tag="VHZ56_01495"
     CDS             1506..2852
                     /locus_tag="VHZ56_01495"
                     /inference="COORDINATES: protein motif:HMM:NF018528.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 125 protein"
                     /protein_id="HEX4296672.1"
                     /translation="MIAVPRHVPAGADAWDRPVPADRAAHSEAIERRIARAAAEIADP
                     GLRRLLQGTLPNTLDTTIIASGSETRPDTFVLTGDIHAMWLRDSTAQVWPYLGSVTED
                     AALDRLIRGVIHRQSDQILLDPYANAFLRDSSETTEWVRDETEMRPGVHEHKWEPDSL
                     AAFCRLAAGYWQASGSTQPFDVRWRAALEQVLRTLRTEQRLDGTTPYRFHRPDGDPTD
                     LVPNQGRGAPTRPNGMVHGAFRPSDDACVLPLNVPVNLALAAALEQVAPVAAAADATA
                     CAAEAMALAAEIRAGVARDGMGESAEAWAYEVDGLGGHLDMDDANVPSLLALPYLGAC
                     RADDPRYLATRRRVLSARNPWWFSGAAAEGVGSPHTGPGRIWPIAIAMQGLTAGAPPE
                     RLACARRLGATHAGTYLAHESFAADEPGEFTRPWFAWANSLVGEFLERVALEGLLR"
BASE COUNT          480 a         1002 c          978 g          410 t
ORIGIN      
        1 tcgcccagcg caaattcatc gaagggatca cgctgacggg acagaagggc tgagcgatcg
       61 tccatcgccc cggccgcaac gactagaacc agtcaatcag gaggacgtca ctatgcgtaa
      121 cctagcgaca atggccatgg cgggcgcgct gctcgccttc ggcgccattg gtatggccgc
      181 tccggcggct gccgatacgg tcaacctcac gctccggcac tgctggggcg gcgatgccga
      241 gatggcggcg atgcaaaagg tcgtcgacaa gtggaatgcc gccaaccccg acatccaggt
      301 caagtcgatc ggcggctcga tcgacgccga ggagatcacc gccgatgccg ccggcggcaa
      361 tccgccggac atggtgatca tgtgcgacaa cagcgcggtc gccggcttcg cgcatgacgg
      421 cgtcatcgcg ccgctcgacg acctgctgac gacgatcggc gccgacacca gcgacatcat
      481 cccgtcgtcg ctggcgtgga cgcagtacaa tggcaagcag tacggcctgc cctacggcca
      541 ggacacctat gcgctctact acgacgtcga tgccttcaag gcggccggca tcgccggccc
      601 gcccaagacc atggacgagc tgtgggacga cgcggccaag ctgaccacgt ggaaggccga
      661 cggcacgctg gcccgcgccg ggttcatccc gaacgatccc tacaagaaca ccgagcagac
      721 gtcggcgttc ttcgactgcc agttctacga cacggccacc aagaaggtga cggtcaacag
      781 cccggcctgc gtggcgtggc tgcagtggta caagaagtgg tacgacacct ataacaagaa
      841 caacgccatg gtgaacctga tcgcctcgcg caccggcggc gatgccggcc tcctgatcag
      901 cgggcagcag gcgatgggca tctatggcga atggaacacc ggggcggcct acatcccggt
      961 cgttgccccg aacctccatt acgacaccgc gccggtgccg tcgcaggatc cggcgctcta
     1021 cggtgccggc ttcatgaacg gcaacgcctt catgatcatg gcgggctcca agcaccagga
     1081 agagtcgatg aagttcggca tgtacctgat gagcgacgac gcctcgaagg tgatgatcct
     1141 gcagaactcg agcgtgccgc agctgaagtc gctgctggtc gacaaggacc tgacctcgat
     1201 cccgcacttc acggcattcc tgcagatcgc ggcgttcccg acgtcgtgga cgacgccgat
     1261 gttctcggcc tattcggagc tcgtcgacgg tctcaacacc tcgctcgacg cggtgctgac
     1321 cggcggcgcc gatccgaagc agcagctcga ccagctggcg gcctcgatcc aggcgaaggt
     1381 cgacgccaac ggcggctgag ccgcttccat acgcattacg ggcacgacgc ggagagaccc
     1441 gcgccgtgcc ttgttttttg ccgccggggc gggcagcaat ggcggccgca gacaaggatg
     1501 gtccgatgat cgcagtgccg cgccacgtcc ccgccggcgc cgatgcctgg gaccgcccgg
     1561 tcccggcgga ccgggcggcc catagcgagg ccatcgagcg ccgcatcgcc cgggcggcgg
     1621 cggagattgc cgatccggga ctgcggcggc tgctgcaggg caccctgccc aacacgctcg
     1681 acacgacgat catcgccagc ggcagcgaga cgcgccccga taccttcgtg ctgaccggcg
     1741 atatccatgc catgtggctg cgcgattcga cggcgcaggt ctggccgtat ctcggctcgg
     1801 tcaccgaaga cgccgcgctc gaccggctca tccggggcgt catccaccgg caatccgacc
     1861 agatcctgct cgacccgtac gccaatgcct tcctgcgcga cagcagcgag accaccgagt
     1921 gggtgcgtga cgagaccgag atgcggccgg gggtgcacga gcacaaatgg gaaccggatt
     1981 cgctcgccgc gttctgccgc ctcgccgccg gctactggca ggccagcggc tcgacgcagc
     2041 cgttcgatgt gcgctggcgg gccgcactgg agcaggtgct gcgcacgctc aggaccgagc
     2101 agcgcctgga tggaacgacg ccctaccgct tccatcgtcc ggacggcgac cccaccgatt
     2161 tggtgccaaa ccaggggcgc ggcgcgccga cgcggccgaa cggcatggtg cacggggcgt
     2221 tccggccctc cgacgatgcc tgcgtcctgc cgctgaacgt gcccgtcaat ctggcgcttg
     2281 ccgccgcgct cgagcaggtc gcgccggtgg ccgcggccgc cgatgcgacg gcctgcgcgg
     2341 cggaggcgat ggcgctggcc gccgagattc gcgccggggt ggcgcgcgac gggatgggcg
     2401 agagcgccga ggcgtgggcg tacgaggtgg acgggctcgg cggccacctg gacatggacg
     2461 atgccaacgt cccgagcctg ctggccctgc cctatctcgg ggcctgtcgc gccgacgatc
     2521 cacgctatct cgcgacccgg cgccgggtgc tctcggcgcg caatccgtgg tggttctccg
     2581 gcgccgcggc ggagggcgtc ggctcgccgc acaccggacc ggggcggatc tggccgatcg
     2641 cgatcgccat gcagggcctc accgccgggg ccccgccgga gcggctcgcc tgcgcgcggc
     2701 ggctcggcgc cacccacgcc ggcacctacc tcgcgcatga atcgttcgcc gccgacgagc
     2761 cgggcgaatt cacccgcccg tggttcgcct gggccaactc gctggtcggc gagttcctgg
     2821 agcgggtggc gctcgagggc ctgctgcgct agcggcggcg gtgggcggga
//
LOCUS       DATAZA010000060         3205 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3137729, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000060 DATAZA010000000
VERSION     DATAZA010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3205
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3137729"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..177
                     /gene="rplX"
                     /locus_tag="VHZ56_01500"
     CDS             <1..177
                     /gene="rplX"
                     /locus_tag="VHZ56_01500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEX4296673.1"
                     /translation="TKQTAAQDAGIFTKEAAIHLSNLALADTNGKPTRVGFKIQDDGK
                     KVRVAKSTGDVIDG"
     gene            170..727
                     /gene="rplE"
                     /locus_tag="VHZ56_01505"
     CDS             170..727
                     /gene="rplE"
                     /locus_tag="VHZ56_01505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011581004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEX4296674.1"
                     /translation="MAETQYVPRLRTQYEESIKADLMKQFGYKNVMQLPKLDKVVLNM
                     GVGEAVNDTKKVKAAAGDLEKIAGQRPVITHARNSIAGFKVRENMPLGVKVTLRKARM
                     YEFVDRLVNVALPRVRDFRGLNPKSFDGRGNYAMGIKEHIIFPEIAYDQIDQVWGMDI
                     IVCTTARTDDEARALLRAFNFPFRQ"
     gene            748..1053
                     /gene="rpsN"
                     /locus_tag="VHZ56_01510"
     CDS             748..1053
                     /gene="rpsN"
                     /locus_tag="VHZ56_01510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007875326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HEX4296675.1"
                     /translation="MAKTSSIEKNNRRRKLSKQYAAKRAKLKALTKDQSVSMEDRFGA
                     QLKLAELPRNASPGRVRNRCEVTGRPRGYYRKLKLSRIALRQLGNFGQVPGMVKSSW"
     gene            1066..1464
                     /gene="rpsH"
                     /locus_tag="VHZ56_01515"
     CDS             1066..1464
                     /gene="rpsH"
                     /locus_tag="VHZ56_01515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006205453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEX4296676.1"
                     /translation="MSLTDPIADMLTRIRNAQMRRRDTVSTPASTLRARVLDVLKSEG
                     FIRGYSEQKTENGLNEYEIELKYSDNTPVIRTIERVSRPGRRVYVSVKNIPSVANGLG
                     VSILSTPRGVMADHEAKSQNLGGEVVCRVF"
     gene            1516..2049
                     /gene="rplF"
                     /locus_tag="VHZ56_01520"
     CDS             1516..2049
                     /gene="rplF"
                     /locus_tag="VHZ56_01520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004685699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEX4296677.1"
                     /translation="MSRTGKKPIPAVSGVTVTIKDREVHAKGPKGEQSLTLMDIVNAT
                     QTDHGIEITPANDTQEARAAWGTTRALIANMVKGVKDGFEKKLQIQGVGFRAAMQGKD
                     LKLSLGFSHEVIFNTPKGITIVTPTQTEVTITGPDKQQVGQVAADIRAWRKPEPYKGK
                     GVRYVGEYIARKEGKKK"
     gene            2062..2424
                     /gene="rplR"
                     /locus_tag="VHZ56_01525"
     CDS             2062..2424
                     /gene="rplR"
                     /locus_tag="VHZ56_01525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEX4296678.1"
                     /translation="MPTSLKGSERRKSRVRRAIKARANGRPRLSVFRSGKNIYAQIID
                     DASGRTLAAASTLDKDVKASVKNGGTSEAAIAIGKLIAERGKAANVSEVIFDRGGYLY
                     HGRVKALADAAREAGLQF"
     gene            2444..2974
                     /gene="rpsE"
                     /locus_tag="VHZ56_01530"
     CDS             2444..2974
                     /gene="rpsE"
                     /locus_tag="VHZ56_01530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEX4296679.1"
                     /translation="MRDVQERDSEFVDRLVHINRVAKVVKGGKRFGFAALVVVGDQKG
                     RVGFGHGKAREVPEAIRKATEQAKRQLIRVPLREARTLHHDVTGRHGAGKVVLRAAVP
                     GTGIIAGGPMRAVFETLGVNDIVAKSTGTSNPYNMVRATFDALKKVDSPRSVAARRGL
                     KVSELQARRGQESVEA"
     gene            2975..3163
                     /gene="rpmD"
                     /locus_tag="VHZ56_01535"
     CDS             2975..3163
                     /gene="rpmD"
                     /locus_tag="VHZ56_01535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002967737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HEX4296680.1"
                     /translation="MADKTVTVEQIASPSRRTADQRATLVGLGLNKIRKQRTLKDTPE
                     VRGMINKIPHLVRVVGDK"
BASE COUNT          675 a         1055 c         1029 g          446 t
ORIGIN      
        1 accaagcaga ccgccgcgca ggacgccggc atctttacca aggaagccgc gatccacctc
       61 agcaacctcg ctctggcgga caccaacggc aagccgaccc gcgtcggctt caagatccag
      121 gacgacggca agaaagtgcg cgtcgccaag tcgaccggag atgtgatcga tggctgagac
      181 ccaatacgtt ccgcggctgc gcacgcagta cgaggagtcg atcaaggccg acctgatgaa
      241 gcagttcggc tacaagaacg tcatgcagct gcccaagctc gacaaggtcg tgctgaacat
      301 gggcgtcggc gaagccgtca acgacaccaa gaaggtcaag gccgccgccg gcgacctcga
      361 gaagatcgcc ggccagcgcc cggtgatcac ccacgcccgc aactcgatcg ccggcttcaa
      421 ggtgcgagag aacatgccgc tcggcgtcaa ggtgacgctg cgcaaggccc gcatgtacga
      481 gttcgtcgac cggctggtga acgtcgcgct gccgcgggtg cgcgacttcc gcggcctcaa
      541 cccgaagtcc ttcgacggcc gtggcaacta tgccatgggc atcaaggaac acatcatctt
      601 cccggaaatc gcctacgacc agatcgacca ggtctggggt atggacatca tcgtctgcac
      661 cacggcgaga accgacgacg aagcccgggc gctgctcagg gcattcaatt ttcccttccg
      721 gcagtaagaa gggcagaagg acgagacatg gcaaagacca gctcaatcga gaagaacaac
      781 cgccgcagga agctgagcaa gcagtatgcg gccaagcgcg ccaagctgaa ggccctgacc
      841 aaggaccagt cggtcagcat ggaagaccgc ttcggcgccc agctgaagct cgccgagctg
      901 ccgcgcaatg cgtcgccggg ccgggtgcgc aaccgttgcg aagtgacggg gcgtccgcgc
      961 ggctactacc gcaagctcaa gctgagccgc atcgcgctgc gccagcttgg caatttcggg
     1021 caggtgcccg gcatggtcaa gtcgagctgg taaggagaga caccgatgag ccttactgat
     1081 ccgatcgccg acatgctgac ccgcatccgc aacgcccaga tgcgccgccg cgacaccgtg
     1141 tcgacgccgg cctcgacgct gcgggcgcgc gtcctcgacg tgctgaagtc ggaaggcttc
     1201 atccgcggct attccgagca gaaaaccgag aacggcctca acgagtatga gatcgagctc
     1261 aaatattccg acaacactcc ggtgatccgg accatcgagc gcgtctcgcg cccgggccgc
     1321 cgggtctatg tgtcggtgaa gaatattccg tcggtcgcca acggcctcgg ggtgtcgatc
     1381 ctgtcgacac cgcgcggcgt catggccgac catgaagcga agtcccagaa cttgggtggc
     1441 gaggtagtct gccgagtatt ctaagcgctg cttggaatgc ttcggtccag atgatgactc
     1501 cgaaggaaga ttgaaatgtc tcgtacaggc aaaaagccca ttccggcggt gagcggcgtg
     1561 accgtcacca tcaaggaccg cgaggttcac gccaagggtc cgaagggcga gcagtcgctg
     1621 acgctgatgg atatcgtcaa cgccacgcag accgaccatg gcatcgagat cacgccggcc
     1681 aacgacacgc aggaagcgcg cgccgcctgg ggcaccaccc gggcgctgat cgccaacatg
     1741 gtcaagggcg tcaaggacgg cttcgaaaag aagctgcaga tccagggcgt cggtttccgt
     1801 gccgccatgc agggcaagga cctgaagctc agcctgggct tttcgcacga ggtgatcttc
     1861 aacaccccca agggcatcac catcgtgacc ccgacgcaga ccgaggtcac cattaccggt
     1921 ccggacaagc agcaggtcgg gcaggtcgcc gccgatatcc gcgcctggcg caagccggag
     1981 ccctacaagg gcaagggcgt acgctatgtg ggcgagtaca tcgcccgcaa agaaggcaag
     2041 aagaagtagg gagcgccaga catgccaacc agcctcaagg gttccgagcg ccgcaagtct
     2101 cgcgtccgcc gcgccatcaa ggcgcgcgcc aacggccgcc cgcgcctgag cgtcttccgc
     2161 tccggcaaga acatctatgc ccagatcatc gacgacgcgt cgggccgcac gctcgccgcc
     2221 gcctcgaccc tcgacaagga cgtcaaggcc agcgtcaaga atggcgggac gtcggaggcg
     2281 gcgatcgcca tcggcaagct gattgccgag cgcggcaagg cggccaatgt gtccgaggtc
     2341 attttcgacc gcggcggcta tctctaccac ggccgcgtca aggccctggc ggacgccgcc
     2401 cgcgaagccg gcctgcagtt ctgatcgcgc aaaggaaagc atcatgagag acgttcaaga
     2461 gcgcgacagc gagtttgtgg atcgcctggt ccacatcaac cgcgtggcca aggtggtgaa
     2521 gggcggcaag cgcttcggct tcgccgcgct ggtggtggtc ggcgaccaga agggccgcgt
     2581 cggcttcggc cacggcaagg cccgcgaggt ccccgaggcc atccgcaagg ccaccgagca
     2641 ggccaagcgc cagctcatcc gcgtgccgct gcgcgaggcc cgcacgctgc atcacgacgt
     2701 gaccggccgc catggcgccg gcaaggtggt gctgcgcgcc gccgtgcccg gcaccggcat
     2761 catcgccggc ggtccgatgc gcgccgtgtt cgagacgctg ggcgtcaacg acatcgtcgc
     2821 caagtccacc ggcacctcga acccttacaa catggtgcgc gccacgttcg acgcgctcaa
     2881 gaaggttgac agcccgcgct cggtcgcggc tcgccgcggc ctcaaggtct cggaactgca
     2941 ggcccgtcgc ggccaggaat cggtggaggc ataaatggcc gacaagaccg tcaccgtcga
     3001 gcagatcgca tccccgtcgc gccgcaccgc ggaccagcgg gcgaccctgg tcgggctcgg
     3061 gctcaacaag atccgcaagc agcggacgct gaaggacacg ccggaagtac gcggcatgat
     3121 caacaagatc ccgcatctcg tgcgcgtcgt cggcgacaaa taacagcggt tggaccggag
     3181 gcgccgttgg cgccgacggg gcagg
//
LOCUS       DATAZA010000061         2113 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3834072, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000061 DATAZA010000000
VERSION     DATAZA010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3834072"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..630
                     /locus_tag="VHZ56_01540"
     CDS             <1..630
                     /locus_tag="VHZ56_01540"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0071951 - conversion of methionyl-tRNA to
                     N-formyl-methionyl-tRNA [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEX4296681.1"
                     /translation="APRLGCLNLHGSLLPRWRGAAPIQRAVLAGDTRTGVMVMQMDEG
                     LDTGPVALVDEMPIGADATTGELHDRMMLVGADLMGRALAALERGTLTFTPQREDGVT
                     YAKKIEKAEARIDWNRPAQQVHNLIRGMSPFPGAWFELMLGGAPVRVKALRSTLAAGS
                     GAPGTILPDFTIACGEGAVRLSLVQREGKSAMDAATFLRGAGDLPGMVR"
     gene            697..1449
                     /gene="truA"
                     /locus_tag="VHZ56_01545"
     CDS             697..1449
                     /gene="truA"
                     /locus_tag="VHZ56_01545"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEX4296682.1"
                     /translation="MPRYRLTLEYDGTPFSGWQRQADTLSVQQVIEDAIGRMSGETVV
                     VQAAGRTDSGVHALGQVVSFDLGRDWDPFRIREALNFHTKPYPVAILSAEAVPPNFEA
                     RFSAVARHYEYRILNRRGRPALDDRRVWHCPMPLDAAAMHAAAQLILGKHDFTTFRAA
                     ECQAKSPEKTLDRLDVSREGDIIVVRAGARSFLHSQVRSMVGSLKLVGEGKWAPRQFR
                     AALDARDRARCGPLAPPDGLYLVRVDYPSELS"
     gene            complement(1428..2009)
                     /locus_tag="VHZ56_01550"
     CDS             complement(1428..2009)
                     /locus_tag="VHZ56_01550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296683.1"
                     /translation="MAKQSTFIEEMMAAGRGVIGLVIGDRQAGSYFDFSRRGLAGSFI
                     AFLLITGLNAVLPLVLGDRDPGGIARSILMVAILFAMQVAFSAIVLRQIKRLDGLVPY
                     LVADNWATFFLTLISAALAAAGLSGDPVLIVLGIVVLVVEVNIARLIVTLSPLQIAMF
                     LIAQVVGVSIGLIVIGFTFPLPPDVAAQLNSLG"
BASE COUNT          362 a          723 c          715 g          313 t
ORIGIN      
        1 gcaccccgcc tcggttgcct caacctccat ggttcgctgt tgccgcgctg gcgcggtgcg
       61 gcgccgatac agcgcgccgt gctggccggc gatacgcgga ccggcgtcat ggtgatgcag
      121 atggacgagg ggctcgacac cggcccggtg gcgctggtcg acgagatgcc catcggcgcc
      181 gacgcgacca ccggcgagct gcacgacagg atgatgctgg tcggcgccga cctgatgggc
      241 cgggccctag cagcgctcga gcgcggcacg ctgaccttca cgccgcagcg cgaggacggc
      301 gtgacctacg ccaaaaagat cgagaaggcc gaggcccgca tcgactggaa ccggccggcg
      361 cagcaggtgc acaacctcat ccgcggcatg tcgccgtttc ccggtgcgtg gttcgaactg
      421 atgctcggcg gggcaccggt tcgggtcaag gccctgcgct cgaccctggc ggccggcagc
      481 ggcgcaccgg ggaccatctt gccggacttc actatcgcct gtggcgaggg cgcggtgcgg
      541 ctgtctttgg tgcagcgtga aggaaagtcc gccatggacg cagcgacctt cctgcgcggg
      601 gcaggggact tgccggggat ggtgcggtga gcggccgcaa cgacattgcc ggcacccgat
      661 cgggttttgc cccttgctcg atgcgtggcg taaatcatgc cccgctatag gctcaccctc
      721 gaatacgatg gaacgccatt ctccggctgg cagcggcagg ccgatacgct cagcgtgcag
      781 caggtcatcg aggacgccat cggcaggatg agcggcgaga ccgtggtggt gcaggcggcc
      841 ggacgcaccg attctggcgt ccacgccctg ggccaggtgg tgagcttcga tctcggccgc
      901 gactgggatc ccttccgtat ccgcgaagcg ctgaatttcc acaccaagcc ctatccggtc
      961 gcgatcctct cggccgaggc cgtgccgcca aatttcgagg cgcgcttttc cgccgtcgcc
     1021 cggcactacg aataccgcat cctcaaccgt cgcggccgtc ccgcgctcga cgaccggcgc
     1081 gtctggcatt gcccgatgcc gctcgacgcc gcggccatgc atgccgccgc ccagctgatc
     1141 ctcggcaagc acgacttcac gacgttccgc gccgccgagt gccaggcgaa gtcgccggaa
     1201 aagaccctcg accgtctcga cgtcagccgc gagggcgaca tcatcgtcgt gcgcgccggc
     1261 gcccgcagtt tcctccattc gcaggtgcgc tcgatggtgg gttcgctcaa gctcgtgggt
     1321 gagggtaaat gggcgccgcg gcagttccgc gccgcgctcg atgcccgcga ccgcgcccgc
     1381 tgcggcccgc tggcgccgcc cgacgggctc tatctggtgc gcgtcgatta ccccagcgaa
     1441 ttgagctgag cggcaacatc cgggggtagc gggaaggtga agccgatgac gatcaggccg
     1501 atcgacacgc cgaccacctg ggcgatgagg aacatcgcga tctgcagcgg cgacagcgtg
     1561 acgatcagcc gggcgatgtt gacctccacc accagcacca cgatgccgag cacgatcagc
     1621 accggatcgc cgctgaggcc cgcggcagca agcgccgccg agatcagcgt caggaagaac
     1681 gtcgcccagt tgtcggcgac gagatagggc accagcccgt cgagccgctt gatctggcgc
     1741 agcacgatcg ccgagaacgc cacctgcatc gcgaacagga tggcgaccat caggatcgac
     1801 cgtgcgatgc cgcccggatc tcggtcgccc agcaccagtg gcagtacggc gttgagcccg
     1861 gtgatcagca ggaaggcgat gaagctgccg gccagtcccc gccgcgaaaa atcgaaatag
     1921 ctccccgcct gccggtcgcc gatgaccagc ccgatcacgc cgcggccggc ggccatcatc
     1981 tcttcgatga atgtcgattg cttcgccaag tcaggactct tcaggcggtg ggcgggacga
     2041 gcgacagcag catgtagagg gcgttgggca cgaccacaag caccatgaag cagaggagcg
     2101 ccagcccggc ggc
//
LOCUS       DATAZA010000062         2890 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_468698, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000062 DATAZA010000000
VERSION     DATAZA010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2890
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_468698"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..565
                     /locus_tag="VHZ56_01555"
     CDS             <1..565
                     /locus_tag="VHZ56_01555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296684.1"
                     /translation="DRTVRRIARYAGACAAAAAGSAKPVWGHKTTAEQIFELVEPALP
                     NPEGFDAVGDFIETFRQLMTVFIVRDGRTCIPSKMRRAGLSLELAIARWKFSIGLLSR
                     LNEAGVRLHVLRMEDLLMDGPGELKQVCAALDVAYDPIMLTGTQNEKMLPAYRRDKLD
                     PNAAAIPGEQEWVAQIAPELRYLGYRV"
     gene            862..2211
                     /locus_tag="VHZ56_01560"
     CDS             862..2211
                     /locus_tag="VHZ56_01560"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEX4296685.1"
                     /translation="MRLSRYFLPVLKETPKEAEIVSHQLMVRAGMIKQQAAGSYSWLP
                     LGFRVLQKIIRIVEEEQDRSGAIQLLMPTLQSADLWRESGRYDAYGKEMLRVQDRHER
                     DMLYGPTNEEMITDIFRTYVRSYKDLPLNLYHIQWKFRDEVRPRFGTMRSREFLMKDA
                     YSFDLDFDGAQAAFYRMFVAYLRTFHRMGLVGIPMRADSGPIGGKMSYEFHVLAETGE
                     SGVFLHKDLVDKPIPGIDTDFRGDLAPIFNDWTSLFAATDEMTDEAGFKAAVPADKQL
                     IARGIEVGHIFYFGTKYSGPMKANVTGPDGKDVPVQMGSYGIGPTRLVPAVIEASHDD
                     KGIVWPVSVAPFELEIINLKVGDPGTDAACEGLYAEAQAAGLDTLYDDRDQPAGAKFA
                     VADLIGIPYQLILGPRGLKDGQAEVKHRKSGERETLPLGAAVTRLKSLIEPQRRDKV"
     gene            2208..>2890
                     /locus_tag="VHZ56_01565"
     CDS             2208..>2890
                     /locus_tag="VHZ56_01565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4296686.1"
                     /translation="MSGTTAAPHTRTAGPFSRFEWMLAGRYLRSRRKETFISVISWLT
                     LVGVAIGVATLIVVMSVMNGFRDELLTKILGLNGHFTAYPIDSKFTDYDQTAMKIEKV
                     NGVLFAIPYVEGQALASGQDQSTGVSVRGISAASVDKLKLLKSGAVLGGWDQWDASNG
                     IAIGQRLAEKLGVTIGDPVTIVTPNGTDTPFGKTPQIRSYPVTVIFNLGMVEFDSFYI
                     YMPMQAAQK"
BASE COUNT          525 a          920 c          954 g          491 t
ORIGIN      
        1 ggaccggacc gtccggcgga tcgcgcggta cgccggcgcc tgcgccgccg cggcagccgg
       61 cagtgccaag ccagtgtggg ggcacaagac gaccgcggag cagatcttcg agctggtcga
      121 gccggcgttg cccaacccgg aagggttcga cgcggtcgga gatttcatcg agacgttccg
      181 ccagctgatg actgtcttta tcgtgcgcga cggacggacc tgcattccct cgaagatgcg
      241 tcgcgccggc ctgtcgctcg agcttgccat cgcgcgctgg aagttctcga tcggcctgct
      301 cagtcggctc aacgaggcgg gggtccggct ccatgtgctg cggatggaag atctgctgat
      361 ggacggcccc ggcgagttga agcaggtctg cgccgcgctc gatgtcgcct acgaccccat
      421 catgctgacc gggacacaga acgaaaaaat gctgcccgcc tatcgccgcg acaagctcga
      481 tccgaacgcg gcggccattc ccggggaaca ggagtgggtg gcgcagatcg cgccggaact
      541 gcgctatctg gggtatcgcg tgtaggtcgc ggaaaagaaa aagcagggcg tgagccctgc
      601 cttaaatagt ttgacgacaa tacgctggtc ttaggcacac ggttaagcgg cggccagcgc
      661 tcctcccttg acgttgtcga cgtccggcag cttcggggcc gcctgtaatt tattgcgctg
      721 gaccgtagca aggcggccac actctgtcac ctagattctg cgaccttttt gcgccggctc
      781 cgaggctgga cacggcttga ccgttgcgct ttgactacgg cgccgccgcc caccgagtcg
      841 gccgaattgc ttggggtttc aatgcgtctc agccggtatt tcctgcccgt cctgaaagag
      901 actccgaagg aagccgagat cgtctcgcac cagctgatgg tgcgggccgg gatgatcaag
      961 cagcaggccg cgggatcgta ttcgtggctg ccgctcggct tccgcgtgct gcagaagatc
     1021 atccgcatcg tcgaggagga gcaggaccgc tcgggcgcca tccagctgct gatgcccacc
     1081 ctgcaatcag cggacctctg gcgcgagtcg gggcgctacg acgcctatgg caaggagatg
     1141 ctgcgggtgc aggaccggca cgagcgcgac atgctctacg ggccgacgaa cgaggagatg
     1201 atcaccgaca tcttccggac ctatgtgcgg tcctacaagg atctgccgct caatctctac
     1261 cacatccagt ggaagttccg cgacgaggtg cggccgcgct tcggtaccat gcgctcgcgc
     1321 gaattcctga tgaaggacgc ctactcgttc gacctcgatt tcgacggcgc gcaggcggca
     1381 ttctaccgga tgttcgtcgc ctacctcagg acgttccacc ggatgggcct ggtgggcatc
     1441 ccgatgcggg cggattccgg tccgatcggc ggcaagatga gctacgagtt ccacgtcctc
     1501 gccgagaccg gcgagagcgg ggtgttcctc cacaaggacc tcgtcgacaa gccgattccc
     1561 ggcatcgaca cggatttccg tggcgacctg gcgccgatct tcaacgactg gacgtcgctg
     1621 ttcgcggcga ccgacgaaat gaccgacgag gccggcttca aggccgccgt gcccgccgac
     1681 aagcaactca tcgcgcgcgg catcgaggtc ggccacattt tctacttcgg taccaagtat
     1741 tccggcccga tgaaggccaa tgtcaccgga cccgacggca aggacgtgcc ggtgcagatg
     1801 ggcagctacg gcatcgggcc gacgcggctg gtgccggcgg tgatcgaggc gagccacgac
     1861 gacaagggca tcgtctggcc ggtgtcggtg gcgccgttcg agctcgagat catcaacctc
     1921 aaggtcggcg acccggggac ggacgcggct tgcgaggggc tctacgccga ggcgcaggcg
     1981 gcggggctcg atacgctcta tgacgaccgc gaccagccgg cgggggcaaa attcgccgtc
     2041 gccgacctca tcggcattcc ctaccagctg atcctcgggc cgcgcggcct caaggacggg
     2101 caggccgagg tcaagcaccg caagagcggg gagcgcgaga cgctgccgct gggcgcagcg
     2161 gtgacgcgcc tcaaatcact gatcgagccg caaaggcggg acaaggtttg agcggaacca
     2221 cggcggcacc gcacacccgg acggctggcc cgttctcgcg cttcgagtgg atgctggccg
     2281 gccgctatct gcggtcgcga cgcaaggaga cgttcatttc ggtgatctcc tggctcaccc
     2341 ttgtcggggt ggccatcggg gttgcgacgc tgatcgtcgt gatgtcggtg atgaacggct
     2401 tccgcgatga actgctgacc aagatcctcg gcctcaacgg ccacttcacc gcctatccga
     2461 tcgacagcaa gttcaccgac tacgaccaga ccgccatgaa gatcgagaag gtcaacggcg
     2521 tgctgttcgc gattccgtat gtcgagggcc aggccctggc gtccgggcag gaccagtcga
     2581 ccggcgtgtc ggtgcgcggc atctcggcgg cctcggtcga caagctcaag ctgctgaaga
     2641 gcggcgcggt gctcggcggc tgggaccagt gggacgcgtc caacggcatc gccatcggcc
     2701 agcggctcgc ggaaaaactc ggcgtcacca tcggcgatcc ggtgaccatc gtcacgccca
     2761 atggcaccga cacgccgttc ggcaagacgc cacagatccg cagctatccg gtgacggtga
     2821 tcttcaacct cggcatggtc gagttcgaca gcttctacat ctacatgccg atgcaggcgg
     2881 cgcagaaata
//
LOCUS       DATAZA010000063         4242 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1281183, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000063 DATAZA010000000
VERSION     DATAZA010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4242
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1281183"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1810
                     /locus_tag="VHZ56_01570"
     CDS             <1..1810
                     /locus_tag="VHZ56_01570"
                     /inference="COORDINATES: protein motif:HMM:NF019966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidase M16"
                     /protein_id="HEX4296687.1"
                     /translation="RDGIDPLTIEASLNSFEFALRENNTGSFPRGMALMFRTMRSWLH
                     GGDPFEALTYEKPLAALKAQIAAGTRVFETLIAQHLVDNAHRATVLLKADPKLSAEEL
                     ADERSRLDAVAAGMDEDEREDVVEMTARLKLEQETADPPEALAKIPTLGLKDLERTNK
                     PIPIERDTLAGARLLTHPLATNGVIYLDLGFDLTRVPAALVPYLSIFSRALFQTGTAK
                     EDFVSLTQRIGRSTGGVGASRSIGTMRDTHTTTAWLFIRGKAVPDKAGELLAIIGDVL
                     ASAQFGNRDRIKQMLLEEKAGFESSLSGRGSMLVASRLASALSPAAWAAEQSGGIAYL
                     FFLRDLIKRLDSDWASVEAALVRLRDLLVDRRSMVVNVTTDAQIWAAFRPQLEAFVAS
                     LPSAPGAVPDWPVATAHSEGLTFPGQVNFVAKGANLYPLGYVHTGASAVALRHLNTTY
                     LWDKVRVQGGAYGGSASFDPFSGSFVFSSYRDPNLLQTLDAYDAAAGFLQQGVGEQDL
                     VRSIIGAIGSVDTYRLPDAKGFVSMMWELTGNTDANRQQRRDEILGAKAADFRHFGDV
                     LAAVNGAAKVAVLGPDTAVRAANDERGGFLAVTRVL"
     gene            1921..2574
                     /locus_tag="VHZ56_01575"
     CDS             1921..2574
                     /locus_tag="VHZ56_01575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296688.1"
                     /translation="MLSFLLLLACVVSAAPAAAQSTNAAPVLVVTTTALDPATLPLTD
                     DTDKKNVTDYLTGTKTATGNSALVAAANMTGVLYYFGTTANPSSTADAARVGLELCEY
                     LDRAPCFILSINGNDARGPDGAWPAQPEMLVKTAGSRFDAWMMPFNSQFNRAIGGWLA
                     NAPTPEAVVVSTAGGWSASSGKTILEAITSAYASCLKTYPNNLCLLYSVDGTVVMAQ"
     gene            2646..3647
                     /locus_tag="VHZ56_01580"
     CDS             2646..3647
                     /locus_tag="VHZ56_01580"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     exonuclease"
                     /protein_id="HEX4296689.1"
                     /translation="MAEPFLSRDLRILPNGIYIDPPQPQDRAIITHGHADHARYGHGA
                     VLATPDTIAIMKVRYGEDCAGRFEELSYGETVRIGGVAISLHPAGHILGSAQVRLEHQ
                     GQRIVVTGDYKRLADRTAQPFELVECDLLVTEATFGLPVFQHPRPADEIGRLLRSLAA
                     FPERAHVVGCYALGKAQRVISLLRESGYDAPIYLHGAMLRLCALYEERGVALGELRPS
                     LDVPKAELAGQIVIAPPSAIKDRWSRRLPDPVLAVASGWMSVKQRARQSGVELPLVIS
                     DHADWNELRQTITGTGAQTVWVTHGREDALVYWSQQQGLAAEPLRIVAYEDGEEEGE"
     gene            3644..>4242
                     /locus_tag="VHZ56_01585"
     CDS             3644..>4242
                     /locus_tag="VHZ56_01585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HEX4296690.1"
                     /translation="MKKFAQLLELLALTPSRTRKIEAMAQYFAATPDPDRGYALAILT
                     GALSFKNVKPAVLRDVVVAEVDPHLFALSYDYVGDLGETIALIWPHHGAQEDLPSLSE
                     LVELFNTTSKSALPGLIASLLTRAAINERWALVKLATGALRIGVNARLAKTALAEMSG
                     KDLQALEEIWHGIEPPYADLFAWLEGRAGRPDIDAASRF"
BASE COUNT          650 a         1468 c         1468 g          656 t
ORIGIN      
        1 ccgggacggc atcgatccgc tgaccatcga ggcgtcgttg aattcgttcg agttcgcgct
       61 gcgcgagaac aacaccggct cgttcccgcg cggcatggcg ctgatgttcc gtaccatgcg
      121 cagctggctg catggcggcg atccgttcga ggcgctgacc tacgagaagc cgctggcggc
      181 gctcaaggcg caaatcgcgg ccggaacgcg ggtgttcgag acgctgattg cccagcacct
      241 ggtcgacaac gcccaccgcg ccacggtgct gctgaaggcc gatccgaagc tttcggccga
      301 ggagctcgcc gacgagcggt cgcgcctcga cgccgtcgcc gccggcatgg acgaggacga
      361 gcgcgaggac gtggtcgaga tgaccgcccg gctgaagctg gagcaggaga ccgccgatcc
      421 gcccgaggcg ctggcgaaga tcccgacgct cgggctcaag gacctcgagc ggaccaacaa
      481 gcccattccg atcgagcgcg acacgctggc gggggcgcgc ctcctgacgc atccgctggc
      541 gaccaacggc gtcatctacc tcgatctggg gttcgacctg acgcgggtgc cggcggcgct
      601 ggtgccgtac ctgtcgatct tttcgcgggc gctgttccag accggtaccg cgaaggaaga
      661 tttcgtttcg ctgacgcagc ggatcggccg ctccaccggc ggcgtcggcg ccagccggtc
      721 gatcggcacc atgcgcgata cgcacacgac caccgcctgg ctgttcatcc gcggcaaggc
      781 cgttcccgac aaggcgggcg agctgctggc gatcatcggc gacgtgctgg cgagcgcgca
      841 gttcggcaac cgcgaccgca tcaagcagat gctgctcgag gaaaaggccg ggttcgagtc
      901 ctcgctcagc ggccgcggca gcatgctggt ggcgtcgcgg ctcgcctcgg cgctgtcgcc
      961 ggcggcgtgg gccgccgagc agtcgggcgg catcgcctac ctgttcttcc tgcgcgacct
     1021 gatcaagcgc ctcgacagcg actgggcctc ggtcgaggcg gcgctggtgc ggctgcgcga
     1081 cctcctggtc gatcgccggt cgatggtggt caacgtcacc accgacgcgc agatctgggc
     1141 ggccttccgc ccgcagctcg aggcgttcgt cgccagcctg ccgagcgcgc cgggcgccgt
     1201 gccggactgg ccggtggcga cggcgcactc cgaggggctg acgttcccgg gccaggtgaa
     1261 tttcgtcgcc aagggtgcca acctctatcc gctggggtac gtccacaccg gcgccagcgc
     1321 cgtggcgctg cgccacctca acaccactta tctgtgggac aaggtgcgcg tgcagggtgg
     1381 ggcctatggc gggtcggcga gcttcgatcc gttctcgggc agcttcgtgt tcagctcgta
     1441 tcgcgatccg aacctgctgc agacgctcga tgcctacgac gcggcggccg gcttcctgca
     1501 gcagggcgtc ggcgaacagg atctggtgcg ctcgatcatc ggtgccatcg gcagcgtcga
     1561 tacctaccgg ctgcccgatg ccaaggggtt cgtctcgatg atgtgggagc tgacgggcaa
     1621 caccgacgcc aaccggcagc agcggcgcga cgagatcctc ggcgccaagg ccgccgattt
     1681 ccggcatttc ggcgacgtgc tggcggcggt caacggggcg gccaaggtcg cggtgctcgg
     1741 cccggatacg gccgttcggg cggccaatga cgagcgcggc ggcttccttg ccgtcacccg
     1801 ggtgctgtag cgggcgccgc cgacggtgtg gcggcccggc tctttccgcc ggctcgaaag
     1861 cgctctagct tcggacttcg acagaccgtc gaagtccggg ggactcgcat gccgcgcctg
     1921 atgctttcgt ttttgctgct gctggcctgc gtggtgtctg ccgcgcccgc cgcggcacag
     1981 tcgaccaatg ccgcgccggt gctggtcgtc accaccaccg ccctcgatcc ggcgacgctg
     2041 ccgctcaccg acgacaccga caagaagaac gtcaccgact acctgacggg gaccaagacg
     2101 gcgaccggca acagcgcgct ggtcgcggcg gcgaacatga ccggggtgct gtattacttc
     2161 ggcaccaccg ccaatccgtc ctcgaccgcc gacgcggcgc gggtggggct cgagctctgc
     2221 gaatatctcg accgggcgcc ctgcttcatc ctgtcgatca acggcaacga cgcgcgcggc
     2281 ccggacgggg cgtggccggc gcagccggag atgctggtca agaccgccgg cagccggttc
     2341 gacgcctgga tgatgccgtt caattcgcag ttcaaccggg cgatcggcgg ctggctggcc
     2401 aatgcgccga cgcccgaggc cgtcgtcgtg tcgactgccg gcggctggag cgccagcagc
     2461 ggcaagacca tcctcgaggc gatcaccagc gcctatgcca gctgcctcaa gacctacccg
     2521 aacaatctct gcctgctgta ttccgtcgat ggcacggtgg tgatggcgca atagccgaag
     2581 ccggcgcgat ccgcctcgct ccagattgat gaaccgccga tgcggcggct gcgttagagt
     2641 ccggcatggc cgaacccttc ctcagccgcg atctgcgcat cctgccgaac ggcatctaca
     2701 tcgacccgcc gcagccgcag gaccgggcga tcatcaccca tggccacgcc gaccacgccc
     2761 gctacgggca cggtgcggtg ctggcgacgc ccgacaccat cgccatcatg aaggtgcgct
     2821 acggcgagga ctgcgccggc cgcttcgagg agctgtccta cggcgagacg gtgcgtatcg
     2881 gcggggtggc gatcagcctc catccggccg ggcacatcct cggctcggcg caggtgcggc
     2941 tcgagcacca gggacagcgg atcgtcgtca ccggcgacta caagcggctc gccgaccgca
     3001 ccgcgcagcc gttcgagctg gtcgaatgcg acctgctggt caccgaggcg accttcgggc
     3061 tgccggtgtt ccagcatccg cgcccggccg acgagatcgg gcgcctgctg cgctcgctcg
     3121 cggccttccc cgagcgcgcg catgtcgtcg gctgctatgc cctgggcaag gcgcagcggg
     3181 tcatctcgct gctgcgcgaa agcggctatg acgcgccgat ctacctgcac ggcgccatgc
     3241 tccggctctg cgcgctctac gaagagcggg gcgtggcgct gggcgaattg cggccctcgc
     3301 tcgacgtgcc gaaggcggag ctggcgggac agatcgtcat cgcgccgccg tcggcgatca
     3361 aggaccgctg gagccgccgg ctgcccgatc cggtgctggc cgtcgcctcg ggctggatga
     3421 gcgtcaagca gcgggcgcgg cagtccggcg tcgagctgcc gctggtcatc tccgaccatg
     3481 ccgactggaa cgagcttcgc cagaccatca ccgggaccgg ggcgcaaacg gtgtgggtca
     3541 cgcatggccg cgaggacgcg ctggtctact ggagccagca gcagggcctc gcggcggagc
     3601 cgctgcgcat cgtcgcctac gaggacggcg aggaggaggg cgaatgaaga agttcgcgca
     3661 actgcttgaa ctcctggcgc tgacgccgtc gcgcacccgc aagatcgaag cgatggcgca
     3721 gtatttcgct gcgacgcccg atcccgaccg cggctacgcg ctcgccatcc tcaccggcgc
     3781 gctgagcttc aagaacgtca agccggcggt gcttcgcgac gtcgtcgtgg cagaggtcga
     3841 tccgcacctg ttcgcgctca gctacgacta tgtcggcgat ctcggcgaga ccatcgcgct
     3901 gatctggccg catcacggcg cgcaagagga ccttccctcg ctcagcgaac tggtcgagct
     3961 gttcaacacc accagcaagt cggcgctgcc cggcctcatt gcgtcgctgc tgacgcgggc
     4021 ggcgatcaac gagcgctggg cgctggtgaa actggcaacc ggcgcgttgc gcatcggcgt
     4081 caatgcgcgg ctcgccaaga cggcgctggc ggagatgagc ggcaaggatt tgcaggcgct
     4141 cgaggagatc tggcacggca tcgagccgcc ctatgccgat ctcttcgcct ggctcgaggg
     4201 ccgtgccggg cggcccgaca tcgacgccgc ctcgcggttc ca
//
LOCUS       DATAZA010000064         8688 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2441187, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000064 DATAZA010000000
VERSION     DATAZA010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 8688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8688
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2441187"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..192)
                     /locus_tag="VHZ56_01590"
     CDS             complement(<1..192)
                     /locus_tag="VHZ56_01590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013529224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEX4296691.1"
                     /translation="MADLAHLLVQNAAEIERALDTLLAAAPLSGPGVPPDRLVAAMRH
                     GSLDGGKRLRPFLLRQTAAM"
     gene            473..655
                     /gene="rpmF"
                     /locus_tag="VHZ56_01595"
     CDS             473..655
                     /gene="rpmF"
                     /locus_tag="VHZ56_01595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008596866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEX4296692.1"
                     /translation="MAVPKRKTSLMKRGFRRSADALTAPAYVEDKDSGELRRPHHVDL
                     KTGMYRGRQILEPKKA"
     gene            733..2130
                     /gene="fumC"
                     /locus_tag="VHZ56_01600"
     CDS             733..2130
                     /gene="fumC"
                     /locus_tag="VHZ56_01600"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018063676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HEX4296693.1"
                     /translation="MTSMRTESDSMGTINVPADKYYGAQTARSLANFDIGGQKMPEEI
                     IRAFGILKKAAALANFKLGLMDAGTRELIVQAADEVISGRLKEHFPLVVWQTGSGTQS
                     NMNVNEVISNRAIELSGGVMGSKKPIHPNDHVNMSQSSNDTYPTAMHIAAVEAIEGYL
                     VERVQVLRDTLDDKSRQFMDVVKIGRTHLMDATPLTLGQEMSGWVSQIDHALAAIRAT
                     LPQLYELALGGTAVGTGLNAHPKYGETVAAEIAALTGRPFVTAPNKYAVMAGHDAFVG
                     SSGALKQLAVALMKIANDVRWMASGPRSGLGEISIPENEPGSSIMPGKVNPTQSEALT
                     MVVAQVMGNDAAIGFAASQGNFELNVFKPVIAYNFLMEVRLLADAAKSFNDHCAVGIE
                     PNRERIKQLVDQSLMLVTALNRKIGYDNAARIAKNAHKTGTTLRESAIELGLLSGDEF
                     DAEVRPENMVGPLKL"
     gene            complement(2140..2571)
                     /locus_tag="VHZ56_01605"
     CDS             complement(2140..2571)
                     /locus_tag="VHZ56_01605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296694.1"
                     /translation="MTDPNTSSTTTPGSDWRSQRRAERDARRAAWRNGGHPGWGGLPI
                     GGFIVLAIGVVLLAGNMGYSVPHNWWAILILIPAVAALVNAIRFYRAEGQSPRVMGSG
                     IGGLVMLALALALFFDIGLGLFWPVVVIVAGVAIVARSMWR"
     gene            2689..3135
                     /locus_tag="VHZ56_01610"
     CDS             2689..3135
                     /locus_tag="VHZ56_01610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008834723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296695.1"
                     /translation="MSNTVVLPAGARRRRGPLIPPLLLIPFIIYNILAYTLYGGQPSG
                     WANQLFQIHMVSGAEWTLTAGDVMLVVGLVCLFFELLKSTNTGRSSIVEHMLSTALFV
                     VFLIEFLLAGAAASSVFFLLMVMSIVDVVAGFTIAITGAGRDVTVD"
     gene            complement(3190..3435)
                     /locus_tag="VHZ56_01615"
     CDS             complement(3190..3435)
                     /locus_tag="VHZ56_01615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296696.1"
                     /translation="MRPFDLPRGGPPAIVPDNRPSPPRLAAPATFLSQLIAERDHLAP
                     QRARRRAPVGEALRSYAVGGRIAVRRLPPGYRMSIDV"
     gene            complement(3622..4395)
                     /gene="gloB"
                     /locus_tag="VHZ56_01620"
     CDS             complement(3622..4395)
                     /gene="gloB"
                     /locus_tag="VHZ56_01620"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004416 - hydroxyacylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019243 - methylglyoxal catabolic process
                     to D-lactate via S-lactoyl-glutathione [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HEX4296697.1"
                     /translation="MGVLIETFICRTDNYGYLVHDTETRRTAAIDAPDAGAIKVALNH
                     RGWTLTDILITHHHRDHVEGIPVLRADFDATVTGPRLEAEKIMGLDVMVAPGDAVTVG
                     GTSFLVMATPGHTLGQIAYYNPNDRHVFTGDALFSLGCGRMFEGKPGPMWDGLKGLRA
                     LPDDTLVYCGHEYTAENARFAQGVDPRNAALTIRAAEVKRMRAEGKFTIPVSMGMEKA
                     TNPFLRADNPALARAMGLDPDVDPSVVFAALRSAKDQFT"
     gene            4455..5195
                     /locus_tag="VHZ56_01625"
     CDS             4455..5195
                     /locus_tag="VHZ56_01625"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX4296698.1"
                     /translation="MTPDVKRLIGFYKSPLGKISRALVREEIVRLAGSVERRRVLGLG
                     FASPYLRFTLQRAERVLVFMPARQGSSAWPREGPSHTVLCDPLEMPLTDAAVDLIVAV
                     HAFEHVADAEELMRELWRVAAPNARLIVVVPRRRGLWAAADNTPFGDGYPFSRQQLER
                     LLRDHSFVPEAWREALYLPPSSHRLVIRFARFFERFGRLFGPLVAGVIVVSAKKELFP
                     AVPRRRRLERYVRVPGMAPQTAMQGLER"
     gene            5260..6357
                     /locus_tag="VHZ56_01630"
     CDS             5260..6357
                     /locus_tag="VHZ56_01630"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEX4296699.1"
                     /translation="MSDRPLPQPGILNIAPYVPGRSQAPAGVVPVKLSANESPLGPSP
                     AAIAALAEADRSPEIYPEGSSRVLREALGEVHGLDPARIACGNGSDDLLHLLAQCYLG
                     AGDNAVMSRHGFNIYPIVTMGASADIVMAPEKDYRTDVEAMLAAVTERTRIVWLANPN
                     NPTGTYLGRTALERLHAGLRPDILFVLDSAYAEYATAADYDAGIGLVNGAENVVMVRT
                     FSKMGLAASRIGWMYAPAHVLDVVNRIRGPFNVNRPAQFAGAAAARDTAFTLRLRTYN
                     ARWRSWLIRALDGNAIRVIPSEGNFLLALFADAATAHAAFEALFAQGLIVREIGVYGI
                     DNGLRISIGPEAALRQVVEVLKAFGAPGARE"
     gene            6357..7337
                     /locus_tag="VHZ56_01635"
     CDS             6357..7337
                     /locus_tag="VHZ56_01635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate/arogenate dehydrogenase family
                     protein"
                     /protein_id="HEX4296700.1"
                     /translation="MFQKLALIGIGLIGSSIARATRLKGLAQTIAISTRRPETLDEAR
                     ALGLGDLYTLDAKEAVKGADLVILCVPVLAYDRVMEEIGPYLAAGAILSDVGSVKQHA
                     VKTMAPHTPKGVHLIPGHPIAGTEHSGPAAGFPELFINRWCVLTPAGDVDPVAVDRLT
                     SFWGALGSNVEIMEPAHHDMVLAITSHIPHLVAYNIVGTVADLETDTQSEVIKFSASG
                     FRDFTRIAASDPVMWRDVFLTNREAVLEMLGRFLEDLSKLQRMVRVGDGPGMEALFTR
                     TRKVRRSIITAGQETAAADFGRPHASVGKPVDVNVEVARPVREHGGGDDA"
     gene            complement(7334..7900)
                     /locus_tag="VHZ56_01640"
     CDS             complement(7334..7900)
                     /locus_tag="VHZ56_01640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEX4296701.1"
                     /translation="MGNAGVLKPSNCTPQPAAAKLIDTAATGELAALNGTGTGRGYAA
                     MSFADATGKPVTLKDFAGKTLLVNFWASWCIPCRAEMPALDKLAAAEDGPDFMVLPIN
                     LDLGPGGLDKAKKFLADGNFSHLPLYADSSFEAFKQLQTQAVATGLPSSLLLDRQACE
                     LGVLQGPAVWDSPDGTRVIDALKKAAAA"
     gene            8023..>8688
                     /gene="argH"
                     /locus_tag="VHZ56_01645"
     CDS             8023..>8688
                     /gene="argH"
                     /locus_tag="VHZ56_01645"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008550290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEX4296702.1"
                     /translation="MSNRMWGGRFSSGPDAIMEEINASIGFDQRLYRQDIAGSIAHAT
                     MLAEAGILTQADRDAIVTGLNAVLGEIESQKFTFSRGLEDIHMNVESRLRELIGDAAG
                     RLHTARSRNDQVATDFRLYVRDAIDTLLAQVKVLQLALVDRAEAEAETIMPGFTHLQS
                     AQPVTFGHHLLAYVEMLGRDSGRLADARKRLNESPLGSAALAGTPYPIDREMTAKALG
                     FDRP"
BASE COUNT         1398 a         2717 c         3179 g         1394 t
ORIGIN      
        1 catggccgcc gtttgccgca gcaggaacgg ccgcagccgc ttgccgccgt cgaggctgcc
       61 gtgacgcatg gcggcgacca gccggtcggg cggcacgccg ggccccgata gcggcgcggc
      121 ggccagcagg gtgtcgagcg cacgctcgat ttcggcggcg ttttgcacga gaaggtgggc
      181 aaggtcggcc atgggcggcc ccttacacca ggcgtcatcc ccgcgccact ctctccgctg
      241 tcatggccgg gcttgacccg gccaccaacc ggacgagcag caggcggcgg atttggctgg
      301 gtcgccgggt caagcccggg gataatgaac cgaaggggcg gtggcccggc agcgatgcca
      361 gaatggggta gccaaccgcg caattcttct ctatagagcc gccaattccc cggcagaccc
      421 cgatctgtcg ccgccggcgc gccggcgatc cacgagattt acggagaccg tcatggccgt
      481 tccaaagcgc aagacctcgc tgatgaagcg cgggttccgc cgctccgccg atgcgctgac
      541 cgccccggct tacgtcgagg acaaggattc cggcgagctg cgtcgtccgc accacgtcga
      601 cctgaagacc ggcatgtatc gcggccggca gattctcgag cccaagaagg cctgaattca
      661 ggcttttcgg cagcttgcaa tgttcaacgg ccagtcccaa aagggctggc cgtttgcttt
      721 ggatgccctg caatgacctc gatgcgcact gaatcggact cgatgggcac catcaatgtg
      781 ccggccgaca agtactacgg cgcgcagacg gcccgttcac tcgccaattt cgacatcggc
      841 gggcagaaga tgcccgagga gatcatccgc gccttcggca tcctcaagaa ggccgcggcg
      901 ctggcgaact tcaagctcgg gctgatggac gccgggacgc gcgagctgat cgtgcaggcg
      961 gcagacgagg tgatctcggg ccggctgaag gagcatttcc cgctggtcgt ctggcagacc
     1021 gggtcgggca cccagtcaaa catgaacgtc aacgaggtga tctcgaaccg ggcgatcgag
     1081 ctcagcggcg gggtgatggg gtcgaaaaag ccgatccatc ccaacgacca cgtcaacatg
     1141 agccagtcgt ccaacgacac gtatccgacg gccatgcaca tcgcggcggt cgaggcgatc
     1201 gagggctacc tggtcgagcg cgtgcaggtg ctgcgcgaca cgctcgacga caagtccagg
     1261 cagttcatgg atgtggtcaa gatcggccgc acgcatttga tggacgcgac accgctgacg
     1321 ctcgggcagg agatgagcgg ctgggtgagc cagatcgacc acgcgctcgc ggcgatccgg
     1381 gcgacgctgc cgcagctcta cgagctggcg ctcggtggca cggcggtcgg caccgggctc
     1441 aacgcgcatc cgaaatatgg cgagacggtc gcggccgaga tcgcggcgct caccgggcgg
     1501 ccgttcgtga cggcgcccaa caagtacgcg gtgatggccg gacacgatgc gttcgtcggc
     1561 agctcgggag cgctgaagca gctggccgtg gcgctgatga agattgccaa cgacgtgcgc
     1621 tggatggcgt cgggaccacg ctcggggctg ggcgagattt ccattcccga gaacgagccg
     1681 ggctcttcga tcatgccggg caaagtgaat ccgacgcagt cggaggcgct gacgatggtc
     1741 gtggcgcagg tgatggggaa cgacgcggcg atcggctttg cggcgagcca gggcaatttc
     1801 gagctcaatg tcttcaagcc ggtgatcgcc tacaatttcc tgatggaagt gcggctgctg
     1861 gcggacgcgg cgaagagctt caacgatcat tgcgcggtgg ggatcgaacc caatcgcgag
     1921 cggatcaagc agctggtgga ccagtcgctg atgctggtca cggcgctcaa ccgcaagatc
     1981 ggctacgaca atgccgccag gatcgcgaag aatgcgcaca agaccggcac gacgctgcgc
     2041 gaaagcgcga tcgagctggg gctgctgagc ggcgacgagt tcgacgcgga agtgcggccc
     2101 gagaacatgg tcgggccgct caagctctga tcggacgcgt cagcgccaca tgctgcgggc
     2161 gacgatggcg acgcccgcga cgatgacgac caccggccag aacaggccga gaccgatgtc
     2221 gaagaacagc gccagggcga gggcgagcat gacgaggccg ccgattcccg agcccatgac
     2281 gcgcgggctc tgcccctcgg cgcgatagaa gcggatggca ttgaccagcg ccgcgaccgc
     2341 cgggatgagg atcaggatcg cccaccaatt gtgcgggacg ctgtagccca tattgccggc
     2401 gagcagcacg acgccgatgg cgaggacgat gaagccgccg atgggcaggc cgccccagcc
     2461 cggatggccg ccattgcgcc aggcggcgcg gcgggcgtcg cgttcggcgc ggcgctggct
     2521 gcgccagtcg gaaccggggg tggtcgtgct ggacgtgttg ggatcggtca tcggcgccct
     2581 cctgtgatgc cggcaatatc gtgagccctg tgcgccggtg caagtgaggg ctggcgaaca
     2641 accccgggct ttgccattgt ccgcccgaaa ccgagcgagg aggcgccaat gagcaatacc
     2701 gtcgtgctgc cggctggcgc gcgccgccgc cgcggaccgc tgatcccgcc gctgctgctg
     2761 atcccgttca tcatctacaa catcctggcg tacacgctgt atggcgggca gccctcgggc
     2821 tgggccaacc agctgttcca gatccacatg gtctcgggtg ccgaatggac actgacggcc
     2881 ggcgacgtga tgctggtcgt cgggctggtc tgcctgttct tcgagctgct gaaatcgacc
     2941 aataccggcc gcagctcgat cgtcgagcac atgctgtcga cggcgctgtt cgtggtgttc
     3001 ctgatcgagt tcctgctggc cggggcggcc gcgagctcgg tgttcttcct gctgatggtg
     3061 atgagcatcg tcgacgtggt cgccggcttc accatcgcga tcaccggtgc cggccgcgac
     3121 gtgacggtcg actgatttgg ctgcgctctg tccctcgggt ccttcggtcc caagggacaa
     3181 ccgccggcgt cagacgtcga tcgacatgcg atagcccggc ggcaggcggc gcacggcgat
     3241 gcggccaccg acggcgtagc tgcggagcgc ctcgcccacc ggggcgcgac gacgggcgcg
     3301 ctgcggcgcg agatggtcgc gttcggcgat cagctggctg aggaaggtgg cgggcgcggc
     3361 caggcgcggc ggcgaagggc ggttgtccgg cacgatggcc ggcggtccgc ctctgggcag
     3421 gtcgaatggt cgcatgacgc aaagtccctg tctcgcgcgg gcgcatcgtc cccttgggga
     3481 ggtgcgctct ttgttgccgc atggtcgctg caagcccgcc cgaccgcaac actttgttaa
     3541 cggttggcgg cgctttcgcg tgtcagggta aacgcgcgag cggccggatc gtcgccggcg
     3601 ggcgatcgag ggccggaaat ctcaggtgaa ctggtccttg gcgctgcgca gcgccgcgaa
     3661 caccacggag ggatcgacgt cggggtcgag gcccatggcc ctggccagcg ccggattatc
     3721 ggcgcgcagg aacgggttgg tcgccttttc catgcccatc gacacgggga tggtgaactt
     3781 gccctcggcg cgcatccgct tcacttcggc ggcgcggatg gtgagcgcgg cgttgcgagg
     3841 gtcgacgccc tgggcgaagc gggcgttctc ggcggtgtat tcgtggccgc aatagaccag
     3901 cgtgtcatcg ggcagggcac gcaggccctt gaggccatcc cacatcgggc cgggcttgcc
     3961 ctcgaacatc ctgccgcacc ccagcgagaa cagggcatcg ccggtgaaga cgtggcggtc
     4021 gttgggattg tagtaagcga tctgccccag ggtgtggccg ggggtcgcca tgacgaggaa
     4081 cgaggtgccg ccaacggtca ccgcatcgcc gggggcgacc atgacgtcca ggcccatgat
     4141 cttttcggcc tcgaggcgcg gaccggtgac ggtcgcgtcg aaatcggcgc gcagcacggg
     4201 aatgccctcg acgtggtcgc ggtggtgatg ggtgatgagg atgtcggtga gggtccagcc
     4261 gcggtggttg agggcgacct tgatggcgcc ggcgtcgggc gcgtcgatgg cggcggtgcg
     4321 gcgggtctcg gtgtcgtgga cgaggtagcc gtagttatcg gtgcggcaga tgaaggtctc
     4381 gatgaggacg cccacgatga ttttctccgc gcaacgcgat atggagactg tacagaggtg
     4441 gtgattgcaa cgccatgact cctgacgtca agcgcctgat cggcttctac aaatccccgc
     4501 tgggcaagat ttcccgggcg ctcgtgcgcg aggagatcgt gcggcttgcc ggctcggtcg
     4561 agcggcggcg cgtgctcggg ctcggctttg cctcgccgta cctgcggttc acgctgcagc
     4621 gggcggagcg ggtgctggtg ttcatgccgg cacggcaggg gtcctccgcc tggccgcgcg
     4681 aggggccgtc gcacacggtg ctgtgcgatc cgctggagat gccgctgacc gatgccgccg
     4741 tcgacctgat cgtggcggtg catgcgttcg agcacgtcgc cgatgccgag gaactgatgc
     4801 gcgaattgtg gcgggtggcg gcgccgaacg cccggctgat cgtggtggtg ccgcggcggc
     4861 gcgggctgtg ggcggcggcg gacaacacgc cgttcggcga cggctatccg ttcagccggc
     4921 agcaactcga gcggctgctg cgcgaccaca gtttcgtgcc ggaagcctgg cgcgaggcgc
     4981 tgtacctgcc gccttcgagc catcggctgg tgatccgctt cgcgcgcttc ttcgagcgct
     5041 tcgggcggct gttcgggccg ctggtcgcgg gagtgatcgt ggtgtcggcg aaaaaggagc
     5101 tgtttccggc ggtgccgcgg cgcaggcggc tcgagcgcta tgtccgggtg cccggcatgg
     5161 cgccgcagac ggcgatgcag gggctcgagc gctaaggctt tgccttccgg gggccgcttc
     5221 tctatggtcc ggcgcgattt tcgaccccgc ccgagtgcca tgtccgaccg tccgctgccg
     5281 cagcccggca tcctcaatat cgcgccctat gtccccgggc ggtcgcaggc gccggccgga
     5341 gtggtgccgg tcaagctcag cgccaacgaa tccccgctgg ggccgtcgcc ggcggccatc
     5401 gcggcgctgg ccgaggccga ccgctcgccc gagatctatc ccgagggctc gtcgcgcgtg
     5461 ctgcgcgagg cgctgggcga ggtgcacggg ctggatccgg cgcggatcgc ctgcggcaac
     5521 ggctcggacg acctgctgca cctgctggcg cagtgctatc tcggggccgg cgacaacgcg
     5581 gtgatgagcc ggcacggctt caacatctat ccgatcgtga cgatgggcgc ctcggccgac
     5641 atcgtgatgg cgccggagaa ggattatcgc accgacgtcg aggcgatgct cgccgcggtg
     5701 acggagcgca ccaggatcgt ctggctcgcc aatccgaaca atccgacggg cacctatctc
     5761 gggcggacgg cgctggagcg gctgcatgcg gggctgcggc ccgacatcct gttcgtgctc
     5821 gacagcgcct atgccgaata cgcgacggcg gcggactacg atgccggcat cggactggtg
     5881 aacggggccg agaacgtcgt catggtgcgg acgttctcga agatggggct ggcggcgtcg
     5941 cggatcggct ggatgtacgc gccggcgcat gtgctcgacg tggtcaaccg catccgcggg
     6001 ccgttcaacg tcaaccggcc ggcgcagttc gccggagcgg cggcggcgcg cgataccgcg
     6061 ttcacgctgc ggctgcggac ctacaatgcg cgctggcgga gctggctgat acgggcgctc
     6121 gacggcaacg ccatccgggt gatcccgagc gagggcaatt tcctgctggc gctgtttgcg
     6181 gacgcggcga cggcgcacgc ggcgttcgag gcgctgttcg cgcaggggct gatcgtgcgc
     6241 gagatcgggg tctatggcat cgacaacggg ctcaggattt cgatcggccc ggaagcggcg
     6301 ctgcggcagg tggtcgaggt gttgaaggcg ttcggggcgc cgggggcaag agaataatgt
     6361 tccagaaact ggcgctgatc ggcatcggcc tcatcggctc gtccatcgca agggcaacgc
     6421 ggctcaaggg cctggcgcag acgatcgcca tctcgacgcg gcggccggag acgctggacg
     6481 aagcacgggc gctggggctg ggcgatctct acacgctcga tgcgaaggaa gcggtgaagg
     6541 gcgccgacct cgtgatcctc tgcgtgccgg tgctggccta cgacagggtg atggaggaaa
     6601 tcgggccgta tctggcggcg ggggccatcc tctcggatgt cggctcggtg aagcagcatg
     6661 cggtcaagac gatggcgccc cacacgccga agggcgtgca cctgatcccc ggccatccga
     6721 tcgcggggac cgagcattcg gggccggcgg cagggtttcc cgagctcttc atcaaccgct
     6781 ggtgcgtgct gacgccggcc ggcgacgtcg atccggtggc ggtcgaccgg ctgacctcgt
     6841 tctggggggc gctgggttcc aacgtcgaaa tcatggagcc ggcgcaccat gacatggtgc
     6901 tggcgatcac cagccatatc ccgcatctcg tcgcctacaa catcgtgggc acggtggccg
     6961 acctcgagac cgatacgcag tcggaggtga tcaagttctc ggcctccggc ttccgcgatt
     7021 tcacgcgcat cgcggcgagc gatccggtga tgtggcgcga cgtgttcctc accaaccgcg
     7081 aggcggtgct ggagatgctc gggcggttcc tcgaggacct cagcaagctg cagcgcatgg
     7141 tgcgggtcgg ggacgggccg gggatggagg cgctgttcac gcgcacccgc aaggtgcggc
     7201 gctcgatcat cacggccggg caggaaaccg ccgccgccga tttcggccgg ccgcatgcca
     7261 gcgtcggcaa gccggtcgac gtcaatgtcg aggtggcgcg gccggtgcgc gagcatggcg
     7321 gcggcgacga cgcctaggct gcggcagctt tcttcagcgc gtcgatgacg cgggtgccgt
     7381 cgggcgagtc ccagacggcg gggccctgca gcacgccgag ctcgcaggcc tgcctgtcga
     7441 gcagcagcga ggagggcagg cccgtcgcca ccgcctgcgt ctgcagttgc ttgaaggcct
     7501 cgaagctcga atcggcgtag agcggcagat gggagaagtt gccgtcggcg aggaatttct
     7561 tcgccttgtc gaggccgccc gggcccagat cgagattgat cggcaggacc atgaaatcgg
     7621 gtccgtcctc ggcggcggcg agcttgtcga gggccggcat ctcggcccgg cagggaatgc
     7681 accagctggc ccagaaattg accagcaggg tcttgccggc gaaatccttg agggtgacgg
     7741 gcttgccggt ggcgtcggca aagctcatgg cggcgtagcc gcggccggtg ccggtgccgt
     7801 tgagggcggc gagctcaccg gtggcggcgg tgtcgatcag cttggcggcg gcgggctgcg
     7861 gcgtgcagtt ggagggcttc agcaccccgg cattgcccac ccaaaacgat atggctatag
     7921 ctagcgcggc gatcgcgaga gccgcaaaga ccatgcggcg gggtgtgaat ctcggacgct
     7981 ctgcaacggg ttcggacact cggaactcca gggatttcgg cgatgagcaa tcgcatgtgg
     8041 ggtggccgct tctcgtccgg ccccgacgcc atcatggaag agatcaacgc ctcgatcggc
     8101 ttcgaccaga ggctgtaccg ccaggatatt gccggatcaa tcgcgcacgc caccatgctc
     8161 gccgaggcgg gcattctgac gcaggcggat cgcgatgcga tcgtcaccgg cctaaacgcc
     8221 gtgctgggcg agatcgagtc gcaaaagttc acattttcgc gcggcctcga ggacatccac
     8281 atgaacgtgg agtcgcggct gcgcgagctg atcggcgatg cggccgggcg cctgcacacg
     8341 gcgcgctcgc gcaacgacca ggtggcgacc gatttccggc tctatgtgcg ggatgccatc
     8401 gatacgctgc tggcgcaggt caaggtgctg caactggcgc tggtggatcg cgccgaggcg
     8461 gaagccgaga cgatcatgcc ggggttcacg cacctgcaga gcgcgcagcc ggtgacgttc
     8521 gggcaccatc tgctggccta tgtggagatg ctggggcgcg acagcgggcg gctggccgat
     8581 gcgcgcaagc ggctcaatga gagcccgctc ggctcggcgg cgctcgccgg cacgccgtac
     8641 ccgatcgacc gcgagatgac ggccaaggcg ctgggcttcg accggccg
//
LOCUS       DATAZA010000065         7109 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4066417, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000065 DATAZA010000000
VERSION     DATAZA010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 7109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7109
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4066417"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1197
                     /gene="glnA"
                     /locus_tag="VHZ56_01650"
     CDS             <1..1197
                     /gene="glnA"
                     /locus_tag="VHZ56_01650"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017964276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEX4296703.1"
                     /translation="DADSAYIDPFFGASTLAINCDVLDPLTYQPYNRDPRTTAKKAES
                     YVKSSGLGDSVYFGPEPEFFIFDDVRFSNTTYKVGFEVDSSELPSNNDTEYDQGNSGH
                     HIGLKKGYFPVPPLDSAQDMRGEMLAAMGAMGVPIEKHHHEVASAQHELGIKFCPIIK
                     AADSVQIYKYVIHQVANAYGKTVTFMPKPVYGDNGSGMHCHQSIWKDGKPLFAGDQYA
                     GLSMEALYYIGGIIKHAKAINAFTNPTTNSYKRLVPGFEAPVLLAYSARNRSASCRIP
                     FGQSPKSKRVEVRFPDPLANPYLGFAAMLMAGVDGIKNKIHPGDPMDKDLYELPPEEL
                     KAIPTVCGSLREALDSLDKDREFLKAGGVFDDDQIDSYIDLKMVEVVKFEHTPHPVEY
                     EMYYSA"
     gene            complement(1252..1875)
                     /locus_tag="VHZ56_01655"
     CDS             complement(1252..1875)
                     /locus_tag="VHZ56_01655"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX4296704.1"
                     /translation="MRYVGPITGCYTLSDRHEANGKGIAVHACRTLSISSTAAAISAV
                     QVGEVGEWITARFDGIGIIRGKIDRMIDGGFVFQISGTPVQQLKLAKRIDWLKRKSQR
                     ASTDKREYPRSQPRDARSTITLANDEVKPCYLIDVSRSGAAVSMNYRPEVGTALVLGI
                     VACKVIRHIDEGFVVKFDALQDADAVEQLVTGFEPRLREEASAAAAG"
     gene            complement(2466..2876)
                     /locus_tag="VHZ56_01660"
     CDS             complement(2466..2876)
                     /locus_tag="VHZ56_01660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296705.1"
                     /translation="MTLPTFIKTGLVALALSATSLAAVPAQAAGISFNFGNGPFNGVH
                     MHFGDHNYFNYCLSDHRVEDLLEDQYGFHNVNIVRESHDDDFNNRVWATGIKHHDFYM
                     IRVDRCSKDVNFHKIDHDDHDHFDPGHIHLQFSF"
     gene            2994..5090
                     /gene="parE"
                     /locus_tag="VHZ56_01665"
     CDS             2994..5090
                     /gene="parE"
                     /locus_tag="VHZ56_01665"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002966042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009340 - DNA topoisomerase IV complex
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HEX4296706.1"
                     /translation="MPRHSPTNKAATEQLPRRAKSIARFDLHETPALPKPNLDLFDSS
                     AEPAPRKKAAATVAAGSSYTAADIEVLEGLEPVRRRPGMYIGGTDSNALHHLFAEVID
                     NSMDEAIGGHASRIEVHFGADGYLTVVDNGRGIPVENHPKFPGRSTLEIVLTTLHAGG
                     KFDSKAYETSGGLHGVGVSVVNALSDDLMVEVARDQVLYRQTYSRGKPTSKVLKVGPV
                     QNRRGTTTRFHPDPEIFGGKAEFSALRLFRMTRSKAYLFGGVEIRWSCDETLASDDVP
                     AKASFHFPGGLRDFLAARIEGEQRIVDDIFSGQSGKPGSHGAVEWAISWNLADGFLSS
                     YCNTIPTAEGGTHEQGLRVALLRGLKSYAELRNEKRAAAITADDLLVQCSAMLSVFIR
                     EPEFVGQTKDRLSSPEATRIVDVALRDAFDHWLTTSPQQANKLLDWAVERAEERLRRK
                     KEKEIDRQSATRKLRLPGKLADCTQSAAQGAELFIVEGDSAGGSAKSARDRASQAVLP
                     LRGKVLNVAGATREKLAANQQIADLIQALGCGTRDRYREDDLRYDKIILMTDADVDGA
                     HIASLLMTFFFQEMPKLIDDGHLYLAMPPLFRLSQANKVAYAKDEADRDALLETEFKG
                     RKPDITRFKGLGEMPYVHLRETTMDKKTRTLLQVRVLQDRDETKWQVDQLMGTRPEAR
                     FAFIQQNAQFVTDLDI"
     gene            5243..6721
                     /locus_tag="VHZ56_01670"
     CDS             5243..6721
                     /locus_tag="VHZ56_01670"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX4296707.1"
                     /translation="MHEDFSGLGLSAKVTDAVAAAGYTRPTDIQAQAIPHVLEKKDII
                     GIAQTGTGKTASFVLPMLTLLESGRARARMPRTLILEPTRELAAQVHENFEKYGKNHK
                     LSVALIIGGVSFDDQNKKLDRGVDVLIATPGRLLDQFERGRILMSGVEILVIDEADRM
                     LDMGFIPEIERICAKLPPNRQTLFFSATMAPEIQKLTSRFLRDPIRIEVARQNSVVET
                     IDQRLVRVPHSPEDKRAALRQLIRSETQTEGGLKNAIIFSNRKRDVATLARSLQRHGF
                     SAGGLHGDMDQKSRMETLDAFKTGKVQLLIASDVAARGLDIPAVSHIFNFDVPTHAED
                     YIHRIGRTGRAGRSGISITLATPSDGKYLDAITRLIQRDIPAMAMDGIVAAPESAGDS
                     PEPRREHRSRRTRGGEKPRRPAEPEAARRQPAAEREPSEAAPAKARPTPREQAPRQVD
                     HAKPAAPAPQQQAQRPRREPRQDTPFGSDGPVPAFLLRPGAR"
     gene            6865..>7109
                     /locus_tag="VHZ56_01675"
     CDS             6865..>7109
                     /locus_tag="VHZ56_01675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEX4296708.1"
                     /translation="MSDQEFRRALGYANSAMDLLKRGQIPPYPQFYELLYTYATGVNP
                     SLNQRINQIFRDGTATTELAERLYNEFLKSQDANERIS"
BASE COUNT         1361 a         2510 c         2120 g         1118 t
ORIGIN      
        1 gatgcggact cggcctatat cgacccgttc ttcggcgcct cgacgctcgc catcaactgc
       61 gacgtgctcg accccctcac ctaccagccc tacaaccgcg acccgcgcac cacggccaag
      121 aaggccgaga gctacgtgaa gtcgtcgggc ctcggcgaca gcgtgtattt cggccccgag
      181 cccgaattct ttatcttcga cgacgtgcgc ttctccaaca ccacctacaa ggtcggcttc
      241 gaggtcgaca gctcggaact cccctccaac aacgacaccg agtacgacca gggcaattcc
      301 ggccaccaca tcggcctcaa gaagggctac ttccccgttc cgccgctcga cagcgcgcag
      361 gacatgcgcg gtgaaatgct ggcggcgatg ggcgccatgg gcgtgccgat cgaaaagcac
      421 caccacgaag tggcctcggc ccagcacgag ctcggcatca agttctgccc gatcatcaag
      481 gccgcggatt cggtgcagat ctacaagtac gtcatccacc aggtggccaa cgcctacggc
      541 aagaccgtga ccttcatgcc caagcccgtc tatggcgaca acggctcggg catgcactgc
      601 caccagtcga tctggaagga cggcaaaccc ctgttcgccg gcgaccagta tgccggcctg
      661 tcgatggagg cgctctacta catcggcggc atcatcaagc acgccaaggc catcaacgcc
      721 ttcaccaacc cgaccaccaa cagctacaag cgcctggtcc ccggcttcga agccccggtg
      781 ctgctggcct actcggcccg caaccgctcg gcctcctgcc gcatcccgtt cggccagtcg
      841 cccaagtcca agcgcgtcga agtccgcttc cccgatccgc tggcgaaccc ctatctcggc
      901 ttcgccgcca tgctgatggc cggcgtcgac ggcatcaaga acaagatcca tccgggcgac
      961 ccgatggaca aggacctcta cgagctgccg ccggaagagc tgaaggccat cccgacggtc
     1021 tgcggctcgc tgcgcgaggc cctcgacagc ctcgacaagg accgcgagtt cctgaaggcc
     1081 ggcggcgtgt tcgacgacga ccagatcgac agctacatcg acctcaagat ggtcgaggtc
     1141 gtcaagttcg agcacacccc gcacccggtc gaatacgaga tgtactactc ggcctgatgc
     1201 cgttgcgatc aactgaagaa agggccctgc ggggcccttt tgcttttgcg ctcagcccgc
     1261 ggcggcggcg gacgcttcct cgcgcagccg cggctcgaag ccggtgacca gctgctccac
     1321 ggcgtcggca tcctgcagcg catcgaactt caccacgaag ccctcgtcga tgtgccggat
     1381 gaccttgcag gcgacgatgc ccagcaccag cgccgttccg acctccggcc ggtagttcat
     1441 cgacaccgcc gcgccgctcc gcgatacgtc gatgaggtag cagggcttca cctcgtcatt
     1501 ggcgagcgtg atggttgagc gggcgtcgcg cggctgcgac ctcggatatt cgcgcttgtc
     1561 ggtgctggcc cgctggctct tgcgcttcag ccagtcgatg cgcttggcca gcttcagctg
     1621 ctgcaccggc gtgccggaaa tctggaacac gaatccaccg tcgatcatcc ggtcgatctt
     1681 gccgcggatg atgccgatgc cgtcgaaccg cgcggtgatc cactcgccga cttcgcccac
     1741 ctgcaccgcg ctgatcgcgg cggcagtcga ggagatgctc agcgtccggc aggcgtggac
     1801 ggcaatcccc ttgccgttgg cctcgtgccg gtcggacagc gtgtagcagc cggtgatcgg
     1861 cccgacgtag cgcacgtcga ggcgccgatc ggcgatccgg gccgcaacca gggaaggtga
     1921 actcgattgc aatcgatgct cgcagtattg accaagcaat attagtttta ctatgcggcc
     1981 aacaagttga acgcttcgtt tatggcgccg cgaatttcgc cgttgttccg gacctcgtac
     2041 cgaccgcctg gcagccgcgg tcaagcggtc gccacggcag cgaaacgccg gcttcagccg
     2101 aagaacagga tcagggaaag ggcgccgagg acgagcggtc ggggcgcgcg aagatgggca
     2161 agccggtacg cgaaactaca aaatccggcc tgcagccatc ccagacgcag tgactcgaaa
     2221 gaaccatcca gaccgggctc gatacgcgat gccgatccgg cgcgcatacg gctactccac
     2281 acaaaaaacc gtatgacgaa tgtctatcag cgcacgctta aggaagtgct tccaacaagc
     2341 gaagcaaagg ttaagccgct gctccgtttt gagccggcgg tgtcgctaac cgactgatgg
     2401 aaatgataat cccggcccgg cttgcgtcgg accgggacca aacgtgtacc agcttttcgc
     2461 tgcgctcaga aactgaactg caggtggatg tggccgggat cgaaatggtc gtgatcgtcg
     2521 tggtcgatct tgtggaagtt cacgtccttc gaacagcggt cgacccggat catgtagaaa
     2581 tcgtggtgct tgatgcccgt cgcccagacc cggttgttga agtcgtcatc gtggctctcg
     2641 cgcacgatgt tgacgttgtg gaacccgtac tggtcctcca gcaggtcttc cacgcggtgg
     2701 tcgctcaggc agtagttgaa gtaattgtgg tcgccgaagt gcatgtgcac cccgttgaac
     2761 ggcccgttgc cgaaattgaa gctgatgccg gcggcctggg ccggaacggc ggccagcgag
     2821 gtcgcgctca gggccagcgc cacaaggccg gtcttgatga aggtgggaag ggtcatggag
     2881 ctctccaggt aatgatgcca ctggtgggca ttcggcggga ccatagcaat tgcgtttgaa
     2941 cgtatccaca cgccgccgtt catctggcgt tcagattggc cccggcgtgg cgggtgccaa
     3001 ggcattcccc gacgaacaaa gcggcaacgg aacagctgcc gcgccgtgct aaaagcatcg
     3061 cgcgattcga cctccacgag accccagcct tgcccaaacc caacctcgat ctcttcgaca
     3121 gcagtgccga gccggcgccg cgcaagaagg ccgccgcgac ggtcgccgcc ggctcgagct
     3181 ataccgctgc cgatatcgag gtgctggaag gcctcgagcc ggtccgccgc cgccccggca
     3241 tgtatatcgg gggcaccgat tccaacgcgc tccatcacct cttcgccgaa gtcatcgaca
     3301 actccatgga cgaggcgatc ggcggccacg cgagccgcat cgaggtgcat ttcggcgccg
     3361 acggctacct caccgtcgtc gacaacggcc gcggcatccc ggtcgagaac catccgaaat
     3421 tccccggccg ctcgacgctc gagatcgtgc tgaccacgct gcacgccggc ggcaagttcg
     3481 actccaaggc ctatgagacc tcggggggcc tgcatggcgt cggcgtctcg gtggtgaatg
     3541 cgctcagcga cgacctcatg gtcgaagtcg cccgcgacca ggtgctgtac cggcagacct
     3601 attcgcgcgg caagccgacc agcaaggtgc tgaaggtcgg cccggtgcag aaccgccgcg
     3661 ggaccacgac ccgcttccac cccgacccgg aaatcttcgg cggcaaggcc gaattctcgg
     3721 cgctgcggct gttccgcatg acccgctcga aggcttacct cttcggcggc gtcgagatcc
     3781 gctggagctg cgacgagacc ctcgcctccg acgacgtgcc ggcgaaggcg agctttcact
     3841 tccccggcgg cctgcgcgat ttccttgccg cccgcatcga gggcgaacag cgcatcgtcg
     3901 acgacatctt ctccggccag tccggcaagc ccggcagcca cggcgcggtc gaatgggcga
     3961 tcagctggaa cctcgccgac ggcttcctca gctcctactg caacactatt ccaaccgccg
     4021 agggcggcac ccacgagcag ggcctccgcg tcgccctgct gcgcggcctc aaatcctatg
     4081 ccgagctgag gaacgaaaag cgcgccgccg ccatcaccgc cgacgacctg ctggtgcagt
     4141 gctcggcgat gctctcggtg tttatccgtg agcccgaatt cgtcggccag accaaggacc
     4201 ggctgagctc gccggaggcc acccgcatcg tcgacgtggc gctccgcgac gccttcgacc
     4261 actggctcac cacctcgccg cagcaggcca acaagctcct cgactgggcg gtcgagcggg
     4321 ccgaggaacg gctgcggcgc aagaaggaaa aggagatcga ccggcagtcg gcgacgcgca
     4381 agctgcgcct gcccggcaag ctggccgact gcacgcagtc ggccgcccag ggcgccgaac
     4441 tcttcatcgt cgaaggcgac agcgccggcg gcagcgccaa gagcgcccgc gatcgcgcca
     4501 gccaggccgt gctgcccctg cgcggcaagg tcctcaacgt cgccggcgcg acgcgcgaaa
     4561 aactcgccgc caaccagcag atcgccgacc tcatccaggc gctgggctgt ggcacccgcg
     4621 accgctaccg cgaggatgat ctgcgctacg acaagatcat cctgatgacc gatgccgacg
     4681 tcgacggcgc ccacatcgcc tcgctgctga tgaccttctt tttccaggag atgccgaagc
     4741 tcatcgacga cggccacctc tatctcgcca tgccgccgct gttccggctg agccaggcca
     4801 acaaggtcgc ctacgccaag gacgaagccg accgcgacgc cctgctcgag accgagttca
     4861 agggccggaa gcccgacatc acccgcttca agggcctcgg cgaaatgccc tacgtgcact
     4921 tgcgcgagac caccatggac aagaagaccc gcaccctgct gcaggtgcgg gttctgcagg
     4981 accgcgacga gaccaaatgg caggtcgacc agctgatggg aacgaggccc gaggcgcgct
     5041 tcgccttcat ccagcagaac gcccagttcg tcaccgatct ggacatctga gggtcacatc
     5101 cccatgttaa gcaaagccta gggaatcccg ttgactcaga aggggtttcc gctatgttcc
     5161 cggcgctgtc gggaaccact ccgccgctgg cccttcgggg cctcaacgcc ggcccctccc
     5221 aactcctgag tggacgaaca cattgcacga agacttttcc gggctcggcc tcagcgccaa
     5281 ggtcaccgac gcggtcgcgg ccgccggtta caccaggccc accgatatcc aggcgcaagc
     5341 catcccgcat gtcctcgaaa agaaggacat catcggcatt gcgcaaaccg gcacgggcaa
     5401 gaccgcctcg ttcgtgctgc cgatgctcac gctgctcgaa agcggccgcg cccgcgcccg
     5461 catgccgcgc acgctgatcc tcgagcccac ccgcgaactc gcggcgcagg tgcatgagaa
     5521 cttcgagaaa tacggcaaga accacaagct ttccgtcgcc ctcatcatcg gcggcgtcag
     5581 cttcgacgac cagaacaaga agctcgaccg cggcgtcgac gtgctgatcg ccacccccgg
     5641 ccggctgctc gaccagttcg agcgcggccg catcctgatg tcgggtgtcg aaatcctcgt
     5701 catcgacgaa gccgaccgca tgctcgacat gggcttcatc cccgagatcg agcgcatctg
     5761 cgccaagctg ccgcccaacc ggcagacgct gttcttctcg gcgacgatgg cgccggaaat
     5821 ccagaagctc accagccgct tcctgcgcga cccgatccgc atcgaggtgg cgcgccagaa
     5881 ctcggtggtc gaaaccatcg accagcgcct ggtgcgggtg ccgcacagcc ccgaggacaa
     5941 gcgcgccgcg ctgcgccagc tcattcgcag cgagacccag accgagggtg gcctcaagaa
     6001 cgcgatcatc ttttccaatc gcaaacgcga cgtggcgacc ctcgcccgct cgctgcagcg
     6061 gcatggcttc tcggccggcg ggctgcatgg cgacatggac cagaagagcc gcatggagac
     6121 cctcgacgcc ttcaagaccg gcaaggtgca gctgctgatc gccagcgacg tcgcggcccg
     6181 cggcctcgat atcccggcgg tgagccacat cttcaacttc gacgtgccga cccacgccga
     6241 ggactacatc caccgcatcg gccgcaccgg ccgcgccggt cgctcgggca tctcgatcac
     6301 cctcgcgacc ccgtcggacg gcaaatatct cgacgccatc acccgcctca tccagcgcga
     6361 catcccggcg atggcgatgg acggcatcgt cgctgccccc gagtcggccg gcgacagccc
     6421 cgagccgcgg cgcgaacatc gctcgcggcg cacccgcggc ggtgaaaaac cgcgccgtcc
     6481 cgccgagccc gaggccgcca ggcgccagcc tgctgccgaa cgcgaacctt cggaagcggc
     6541 gcccgccaag gctcgcccga cgccgcgcga acaggcgccg cgccaggtcg atcacgccaa
     6601 gcccgccgct ccggcaccgc agcagcaggc ccagcggccg cgccgcgagc ctcgccagga
     6661 caccccgttc ggttcggatg ggccggtccc cgcgttcctt ttgcggcccg gcgcaagatg
     6721 agttcactat tgaacccgta ttatcgctga gatcaactat tccgttagtt tgcccctcga
     6781 gactgctgac ttttactgac gattaattga ctcatcggaa aactaccaag tgtcggccag
     6841 aaggtcggct cgatcggggg cactgtgtca gaccaggaat tcaggcgcgc cctgggatac
     6901 gccaactcgg ccatggacct gctcaagcgg ggccagatcc cgccctaccc ccagttctat
     6961 gagctgctct acacctacgc gaccggcgtc aacccgtcgc tgaaccagcg catcaaccag
     7021 atcttccgcg acggcaccgc caccaccgag ctggccgagc ggctctacaa cgaattcctc
     7081 aaatcgcagg acgccaacga gcgcatctc
//
LOCUS       DATAZA010000066         1726 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_352714, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000066 DATAZA010000000
VERSION     DATAZA010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_352714"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..421
                     /locus_tag="VHZ56_01680"
     CDS             <1..421
                     /locus_tag="VHZ56_01680"
                     /inference="COORDINATES: protein motif:HMM:NF020135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ketopantoate reductase C-terminal
                     domain-containing protein"
                     /protein_id="HEX4296709.1"
                     /translation="KYGKLIMNLANVLDAAGGDAGTRSPVAAAARAEGTAVLAAAGIA
                     MTDVGPADERRQRLLQMQPVSGAERLGSSSFQSLLRGTGSLETDYLNGEIALIGRLHG
                     TPTPVNDGLCRLGRRLLRDRIAPGSLSLVQIEALMAG"
     gene            592..990
                     /locus_tag="VHZ56_01685"
     CDS             592..990
                     /locus_tag="VHZ56_01685"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX4296710.1"
                     /translation="MERFEPKPLDSAVLEELLTTRQSKWNVTVVLHLRRSTRRFSELQ
                     RDIGVISQKALTASLRTLERDGFVSRTSYATIPPRVDYALTELGSEALVAFEAFEHFA
                     TVHWQGVIEARRLFDARPSGPVLAVDRRLR"
     gene            complement(1052..1306)
                     /locus_tag="VHZ56_01690"
     CDS             complement(1052..1306)
                     /locus_tag="VHZ56_01690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296711.1"
                     /translation="MTITKISALALAALVAGAAASPVLALDHSKLFDDGYYLTQLRYD
                     GINAIAANAVTDETFQATVVLPNGNQVFELFDRDSLQQIK"
BASE COUNT          291 a          584 c          568 g          283 t
ORIGIN      
        1 caagtacggc aagctgatca tgaatctcgc caacgtgctc gacgccgccg gaggcgatgc
       61 cggcacgcgc tcgccggtcg ctgcggccgc ccgggccgag ggcaccgcgg tgctcgccgc
      121 ggcgggaatt gccatgacgg acgtcggacc ggcggacgag cggcgccagc ggctcttgca
      181 gatgcagccc gtatccggcg ccgagcggct gggatcgtcg tcgttccaaa gcctgctgcg
      241 cggcaccgga tcgctcgaga ccgactacct gaacggcgaa atcgccctga tcggccggct
      301 ccacggcacc cctacgccag tcaatgacgg tctctgccgg ctcggacggc gcctgctccg
      361 cgaccggatc gcgcccggca gtctcagcct cgtccagatc gaggccttga tggccggctg
      421 accgcggcca tttttatctg cctctggaca atcgggcttc gagcaccgac atccgccggc
      481 gagggggtct ttgtcgccgg tcacggcgat gtgcctatcg gagctgatgt gatgcagggg
      541 caagacctgg acgtgcaaga cctggacgcg caagacttgg acgcgcaaga cttggaacga
      601 ttcgagccga agccgctcga cagcgccgtg ctggaagagc ttctgaccac ccgccagagc
      661 aagtggaacg tcaccgtggt gctgcatctg cggcgcagca cgcggcggtt ttccgagctg
      721 cagcgcgaca tcggcgtcat ttcgcagaag gcgctgaccg ccagcctccg cacgctcgag
      781 cgcgacggct tcgtgtcgcg caccagctac gccaccattc cgccgcgcgt cgactacgcg
      841 ctcaccgagc ttggcagcga ggcgctcgtc gccttcgagg ccttcgagca cttcgcgacg
      901 gtccactggc agggcgtcat cgaggcgcgc cggctgttcg atgcgcggcc cagcgggccg
      961 gtgctggccg tcgatcggcg cctccgctga cgcaacaagg ccggcgggtt agaccgccgg
     1021 ccctgtgcaa tgcggcgttg cagccgcagg ctcacttgat ctgctgcagg ctgtcgcgat
     1081 cgaacagctc gaacacctgg ttgccgttcg gcagcacgac ggtcgcctgg aaggtttcgt
     1141 cggtcaccgc gttggcggcg atggcgttga tgccgtcata gcgcagctgc gtcaggtagt
     1201 agccatcgtc gaacagcttg gagtgatcga gcgccagcac cggcgaggcg gcggcgccgg
     1261 caaccagcgc ggcgagggcg agagcggaaa tcttggtaat ggtcattttg ggtccctttc
     1321 tgtttggacc caccgcagat cggcaccgcc ggcgatcgtc gcaagaccgc atggcagcca
     1381 tgccactgct tgaaattcca caatggatag agagagttac ggcaaggatc gcagcgtccc
     1441 gcgatgcccc tcaccccccg ccacgacgct tgccttcctg gaggatacca tcgctgtcgc
     1501 gggcctttcg ggaacgaagt aggctgtctc ggcatctgat ctgtctggaa cggagcccgc
     1561 catgcccagc gtcaagatcc tcgatatcgc cgacgtgacc cacaacgtcc gccgctacac
     1621 cctcgagcgg ccggagggct acagcttcca gccggggcag gcgaccgatg tttcgctcga
     1681 cgaggagggc tggcgcgaca agaagcaccc cttcaccttc accgcg
//
LOCUS       DATAZA010000067         2841 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_237390, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000067 DATAZA010000000
VERSION     DATAZA010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2841
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237390"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..873)
                     /locus_tag="VHZ56_01695"
     CDS             complement(<1..873)
                     /locus_tag="VHZ56_01695"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HEX4296712.1"
                     /translation="MMEAEVRNFTINFGPQHPAAHGVLRLVLELDGEVVERVDPHIGL
                     LHRGTEKLIETKTYLQAVPYFDRLDYVAPMNQEHAFCLAVERLLGLEVPFRGQLIRVL
                     YAEIGRILSHILNTTTQAMDVGALTPPLWGFDEREKLMVFYERASGSRMHAAYFRPGG
                     VHQDLPQALVDDIEAFCDPFLKVCDDLEGLLTGNRIYMQRNADIGIVSLADAWKWGFS
                     GVMIRGSGAAWDLRKSQPYECYDRLDFDIPIGKNGDCYDRYLVRMDEMRQSIRIMKQV
                     IALLNSPEGKGPVSS"
     gene            complement(870..1487)
                     /locus_tag="VHZ56_01700"
     CDS             complement(870..1487)
                     /locus_tag="VHZ56_01700"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEX4296713.1"
                     /translation="MGDAPDLSPLQALQQRVVTLLGDRVESNEIAYGELAVTLHRESV
                     LDAVRLLHDDPGCRFISFVDVCGVDYPDREERFEVVYHLLSPTGNQRIRLKVHTDDEM
                     PVPSITPVFPGADWFEREAYDFYGILFSGHPDLRRILTDYGFDGYPLRKDFPTTGYVE
                     VRYDEERKRVVYEPVKLAQEFRQFDYLSPWEGTDYVLPGDEKKSS"
     gene            complement(1497..2069)
                     /locus_tag="VHZ56_01705"
     CDS             complement(1497..2069)
                     /locus_tag="VHZ56_01705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008521904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HEX4296714.1"
                     /translation="MGLTETLVAQAPKGVLDPRTGKPIGADDPYFVEINNELADKGFL
                     VTATDELINWARTGSLMWMTFGLACCAVEMIQMSMPRYDVERFGLAPRASPRQSDVMI
                     VAGTLTNKMAPALRKVYDQMPGPRYVVSMGSCANGGGYYHYSYSVVRGCDRVVPVDIY
                     VPGCPPTAEALLYGLLLLQKKIRRTGTIER"
     gene            complement(2060..2425)
                     /locus_tag="VHZ56_01710"
     CDS             complement(2060..2425)
                     /locus_tag="VHZ56_01710"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009450025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEX4296715.1"
                     /translation="MNDLLSNYLPLVLFIGLSGVIALALLLAPFLVAVKSPDPEKVSA
                     YECGFDAFDDARMKFDVRFYLVSILFIIFDLEVAFLFPWAVAFKDVGWFGFWSMMIFL
                     GVLTVGFIYEWRKGALEWD"
BASE COUNT          537 a          936 c          905 g          463 t
ORIGIN      
        1 cgacgacacg ggccccttgc cttccggcga gttcagcagg gcgatcacct gcttcatgat
       61 ccggatcgac tgccgcatct cgtccatgcg caccaggtag cgatcgtagc agtcgccgtt
      121 cttgccgatc gggatgtcga aatcgagccg gtcgtagcac tcatagggct gcgacttgcg
      181 caaatcccag gcggcgcccg agccgcggat catcacgccg gaaaagcccc atttccaggc
      241 gtcggcgagc gacacgatgc cgatgtcggc gttgcgctgc atgtagatgc ggttgccggt
      301 gagcaggcct tcgagatcgt cgcagacctt gaggaacgga tcgcagaacg cctcgatgtc
      361 gtcgaccagc gcctgcggca ggtcctggtg caccccgccc ggccggaagt acgcggcgtg
      421 catccggctg ccggaggcgc gctcgtagaa caccatgagc ttttcgcgct cgtcgaaccc
      481 ccagagcggc ggcgtcagcg ccccgacgtc catcgcctgc gtcgtggtgt tgaggatgtg
      541 gctgaggatc cggccgatct cggcgtagag cacgcggatg agctgcccgc ggaacggcac
      601 ctcgagcccg agcagccgct ccacggctag gcagaaggcg tgctcctggt tcatcggcgc
      661 gacgtagtcg agccggtcga aatacggcac tgcctgcagg taggtcttgg tctcgatcag
      721 cttctcggtg ccgcgatgca ggaggccgat gtgcggatcg acgcgctcca ccacctcgcc
      781 gtcgagctcg agcaccagcc gcagcacgcc atgcgccgcc ggatgctgcg ggccgaaatt
      841 gatggtgaag tttctgacct cggcttccat cacgaactct tcttttcgtc gcccggcagc
      901 acgtagtccg taccttccca agggctcaga tagtcgaact gccggaactc ctgggcgagc
      961 ttcaccggct cgtagacgac gcgcttgcgc tcttcgtcat agcggacttc gacatagccg
     1021 gtggtcggga aatccttgcg cagcggatag ccgtcgaagc cgtagtcggt gaggatgcgg
     1081 cgcaggtcgg gatgtccgga gaacaggatt ccataaaaat cgtaggcttc gcgctcgaac
     1141 cagtcggctc ccggaaacac cggcgtgatc gaaggcaccg gcatctcgtc gtcggtgtgg
     1201 accttcagcc ggatgcgctg gttcccggtc gggctcagca ggtgatacac cacctcgaac
     1261 cgctcctcgc ggtcggggta gtcgaccccg cagacgtcga cgaacgagat gaaccggcaa
     1321 cccggatcgt cgtgcagcag ccggacggca tcgagcacgc tctcgcgatg cagggtgacc
     1381 gccagttcgc cgtaggcgat ctcgttcgac tcgacccggt cgccgagcag agtcacgaca
     1441 cgctgctgga gagcctggag cggcgacagg tccggagcat cccccatggt cggcccctat
     1501 cgctcgatcg tgccggtgcg gcgaatcttc ttctgcagca gcagcagccc gtagagcagc
     1561 gcctcggccg tcggcgggca gcccggcacg tagatgtcca ccggcaccac ccggtcgcag
     1621 ccgcgcacca ccgagtagga gtagtggtaa tagccgccgc cattggcgca gctgcccatc
     1681 gagaccacgt agcgtggccc gggcatctgg tcgtaaacct tgcgcagcgc cggagccatc
     1741 ttgttggtca gcgtgccggc gacgatcatc acgtccgact gccgcggcga ggcgcggggc
     1801 gcgaggccga accgctcgac gtcgtagcgc ggcattgaca tctggatcat ttcgaccgcg
     1861 cagcaggcga gcccgaaggt catccacatc agcgagccgg tacgggccca gttgatcagt
     1921 tcgtccgtcg cggtgacgag aaagcccttg tctgccaact cattgttgat ctcgacgaaa
     1981 tacggatcgt cggcgccgat cggcttgccg gtgcgcgggt cgagcacgcc cttgggcgcc
     2041 tgcgcaacga gagtctcggt caatcccatt cgagcgcgcc cttccgccat tcgtagatga
     2101 acccgacggt gagcacgccg aggaagatca tcatcgacca gaacccgaac cagccgacat
     2161 ccttgaaggc gaccgcccat gggaacagga aggcgacctc gaggtcgaag atgatgaaca
     2221 ggatcgagac caggtagaat cgcacgtcga atttcatccg cgcgtcatcg aacgcatcga
     2281 acccgcattc gtaggccgag accttttccg gatcggggct cttcaccgcg accaggaacg
     2341 gcgccagcag caacgccagc gcgatgacac cggagaggcc tatgaacagc accagcggca
     2401 ggtagttcga gagcagatcg ttcattctgc agcctacttg gcgacccggg agggcgggcc
     2461 gaaacgcgcg ggccgaaggg caatgatggg ccatccggac gacgcaaatc gatgcgtcgg
     2521 gcttagccca cgccctcccc tgtttcaagg aaaacaaaac ctgacccgaa cgctcagttt
     2581 aatgagcgca ggcatccgcc ggaaacaaag cggccccgct ctcgcagggc ccttcgtgca
     2641 tgggatcgac cggctggaag ccggctagtt gaggtgccag atcaacccga ccgtcgcctt
     2701 gccgacgccg ggggcggaac cgaatccacc gagtccctgc agctcgccct tgatgctgag
     2761 cggacccgtg agcgccattt cggcgccgcc gccaaacgcg tacaccgccg tcgagccgac
     2821 gaagcccgcg ccgagctcgc c
//
LOCUS       DATAZA010000068         3349 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4066810, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000068 DATAZA010000000
VERSION     DATAZA010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3349
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4066810"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..731)
                     /locus_tag="VHZ56_01715"
     CDS             complement(<1..731)
                     /locus_tag="VHZ56_01715"
                     /inference="COORDINATES: protein motif:HMM:NF014803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296716.1"
                     /translation="MTAPAATSAAEDVIQLHAPAHDKTVYSSTSALIAAEAPDFPSFL
                     FSEKELHRAVKVFRKGFDGLLTYAVKCNPSPHILQQLHAEGLKAFDVASNTEMELVRE
                     FCPGAAMHYNNPIKNKREIERAYEEFGIRSFTIDHPQQLDQLAAVVAPSRDIEVTTRF
                     KAGKALKSYDFGIKFGVMQDGAAEIVSLVDQMGYTPSLCFHVGSQCEDAYAYERHIAA
                     AAKIAEESGIELKRLNIGGGYPAPYP"
     gene            933..2504
                     /locus_tag="VHZ56_01720"
     CDS             933..2504
                     /locus_tag="VHZ56_01720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HEX4296717.1"
                     /translation="MTQRQVVWGFSGLVVLAAIGGGLLVEHGLPSLGGGSASVPLDMQ
                     IAETSLPPSAVADAPDAQPVQLAAAPAPAAPAAAVQRELPQSQDQVELSYAPLVKQVT
                     PAVVNVYATKTEQGFQSPFQGDPFFSQLFGGQMFPSRPQTSQSLGSGVIVDPKGVIIT
                     NSHVVNGADEIQIALSGGREYPVKVLLDDTKSDLAVLQMQQTGGKTFPALPFADSEDV
                     QVGDIVLAIGNPFGVGQTVTSGIVSGLGRSGVETGNFDYFIQTDAAINPGNSGGALVN
                     MQGRLVGINTAIFTRSGGSVGIGFAIPANMAHTVAEAGEKGGAIVRPWFGAQLQEVTS
                     DIADSLNIDPPHGALITEVAPGSPAANAGLKSGDAIITLDGVDVDAPQGFDFRFATKE
                     LGSKSNITFMRAGKPYQVAVEVAAAPGAGTDQTALISGNTRFAGTTVSLLTPAVAQDM
                     SLPFDSKGVVVTDVAEGSAAEAMGLQKGDVIVAINGTPINDLGTFKSLVSTEANGWQI
                     VLQRNGQTIQSYVSG"
     gene            2520..>3349
                     /locus_tag="VHZ56_01725"
     CDS             2520..>3349
                     /locus_tag="VHZ56_01725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX4296718.1"
                     /translation="MADLFAADPAAAVDSPLADRLRPKSLDEVIGQPHLLGPDGTLRR
                     MIGSGRLGSLILWGPPGTGKTTVARLLADAAGYRFKQISAVFSGVADLKKVFEEARFE
                     RLSGHRTLLFVDEIHRFNRAQQDGFLPVMEDGTLTLVGATTENPSFELNAALLSRAQV
                     LRFESLSVDDMALLAERAEAAMDRKLPLEDDARTALYGLADGDGRALLGLIEEVFAAT
                     RADEVLDQAGLLQVVQRRAPIYDKKQDGHYNLISALHKTVRGSDPDAALYYLARMLVA
                     G"
BASE COUNT          553 a         1008 c         1257 g          531 t
ORIGIN      
        1 gggtagggcg cgggatagcc gccaccgatg ttcaggcgct tgagctcgat gccggattct
       61 tcggcgatct tggcggcggc ggcgatgtgg cgctcgtagg cgtaggcgtc ctcgcactgg
      121 ctgccgacgt ggaagcagag cgagggggtg tagcccatct ggtcgacgag gctgacgatc
      181 tcggcggcgc catcctgcat gacgccgaac ttgatgccga aatcgtagct cttgagcgcc
      241 ttgccggcct tgaagcgggt ggtcacctcg atgtcgcggc tgggggcgac gacggccgcg
      301 agctggtcga gctgctgggg atggtcgatg gtgaaggagc ggatgccaaa ttcctcatag
      361 gcccgctcga tttcgcgctt gttcttgatg ggattgttgt agtgcatcgc ggcgcccggg
      421 cagaactcgc gcacgagctc catctcggtg ttggaggcga cgtcgaacgc cttcaggccc
      481 tcggcgtgga gctgttgcag gatatggggg gacgggttgc acttgacggc gtaggtcagc
      541 aggccgtcga agcccttgcg gaagaccttc acggcgcgat gcagctcctt ttcggagaac
      601 aggaagctcg ggaaatcggg ggcctcggcc gcgatcaggg ccgacgtgct gctgtagacc
      661 gtcttgtcgt gggcgggcgc atgcagctgg atgacgtcct cggcggcaga ggtggcggct
      721 ggagcagtca tcgggcgatc cctttcgagg gcaggaggga cgggctgaaa gcggcccata
      781 tagggacgtt ccagccccgg cacaatgtca tacttgccag ccttacaaaa cggtaagcgg
      841 gcgtccttaa aggcgccgga atctgggcgt tccgctggcg gcgagaaggc gggcgaaccg
      901 tccccgccga ggcctgagac ggagagatcg gcgtgacgca gcgtcaggtg gtttggggat
      961 tttcgggact ggtggtgctg gccgcgatcg gcggcgggct gctggtagag catgggctgc
     1021 cctcgctggg cggtggcagc gcaagcgtgc cgctcgacat gcagatcgcg gagacgtcgc
     1081 tgccgccatc ggcggtggcc gacgcgccgg atgctcagcc ggtgcagctt gccgcggccc
     1141 ccgcgccagc agcgccggcc gcggcggtgc agcgcgagtt gccgcagagc caggaccagg
     1201 tggaactgag ctacgcgccg ctggtgaagc aggtgacgcc ggcggtggtc aatgtctatg
     1261 cgaccaagac cgaacagggc ttccagtcgc cgttccaggg cgatccgttc ttttcgcaac
     1321 tgttcggcgg gcagatgttc ccgagccggc cgcagaccag ccagtcgctc ggctcgggcg
     1381 tgatcgtcga tcccaagggc gtcatcatca ccaattcgca cgtggtgaac ggggcggacg
     1441 aaatccagat cgcgctgagc ggcgggcgcg agtatccggt aaaggtgctg ctcgacgaca
     1501 ccaagtcgga cctggcggtg ctgcagatgc agcagaccgg cggcaagact ttcccggcgc
     1561 tgccatttgc cgattccgag gacgtgcagg tcggcgacat cgtgctggcg atcggcaatc
     1621 cgttcggcgt cggccagacg gtgaccagcg gcatcgtctc ggggctggga cgcagcggcg
     1681 tcgagaccgg caatttcgat tacttcatcc agaccgacgc ggcgatcaac ccgggcaatt
     1741 cgggcggcgc gctggtcaac atgcagggcc ggctggtggg catcaacacc gccatcttca
     1801 cgcgctcggg cggctcggtc ggcatcggct tcgccattcc ggccaacatg gcgcacacgg
     1861 tggccgaagc cggcgaaaag ggcggggcaa tcgtgcggcc gtggttcggc gcgcagttgc
     1921 aggaggtaac gtcggacatc gccgacagcc tcaacatcga cccgccgcac ggggcgctga
     1981 tcaccgaggt ggcgccgggc agcccggcgg ccaacgccgg gctcaaatcg ggggacgcga
     2041 tcatcacgct cgacggcgtc gacgtcgatg cgccgcaggg tttcgacttc cgcttcgcga
     2101 ccaaggaact ggggtcgaaa tcgaacatca cgttcatgcg tgccggcaag ccgtaccagg
     2161 tagcggtgga ggtggcggcg gcgcccgggg cggggaccga ccagaccgca ctgatcagcg
     2221 gcaacacgcg gttcgcggga accacggtga gcctgctgac gcctgccgtg gcgcaggaca
     2281 tgagcctgcc gttcgacagc aagggcgtgg tggtgaccga cgtcgccgag ggctcggcgg
     2341 ccgaagcgat ggggctgcag aagggcgacg tgatcgtcgc catcaacggc acgccgatca
     2401 acgatttggg gacgttcaag tcgctggtct cgacggaggc gaacggatgg cagattgtgc
     2461 tgcagcgcaa cgggcagaca atccagtcgt acgtcagcgg atgacacagc aggcttcgca
     2521 tggccgacct tttcgcggct gacccggccg ccgccgtgga ctcgccgctg gccgaccggc
     2581 tgcggccgaa atcgctcgac gaagtgatcg gccagccgca cctgctgggg ccggacggca
     2641 cgttgcggcg gatgatcggc tcgggccggc tgggctcgct gatcctgtgg gggccgccgg
     2701 gcaccggcaa gaccacggtg gcgcggctgc tggccgatgc ggcgggctac cggttcaagc
     2761 agatctcggc ggtgttctcg ggcgtcgccg acctcaagaa ggtgttcgag gaggcgcggt
     2821 tcgagcggct gagcgggcac cggacgctgc tgttcgtcga cgaaatccat cgcttcaacc
     2881 gggcgcagca ggacggcttc ctgccggtga tggaggacgg cacgctgaca ctggtggggg
     2941 caaccaccga gaacccgagc ttcgagctca atgcggcgct gctgtcgcga gcgcaggtgc
     3001 tgcgcttcga gtcgctgtcg gtggacgaca tggcgctgct ggcggagcgg gccgaggcgg
     3061 cgatggatcg caagctgccg ctcgaggacg atgccagaac ggcgctctac ggactggcgg
     3121 acggcgacgg ccgggcgctg ctcgggctga tcgaggaggt gttcgcggcg acgcgcgccg
     3181 acgaggtgct cgaccaggcc gggctgctgc aggtggtgca gcggcgggcg ccgatctacg
     3241 acaagaagca ggacggccac tacaacctga tctcggcgct gcacaagacg gtgcgcggct
     3301 cggacccgga cgcggcgcta tattacctgg cgcgcatgct ggtggcggg
//
LOCUS       DATAZA010000069         1941 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2558097, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000069 DATAZA010000000
VERSION     DATAZA010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2558097"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..311)
                     /locus_tag="VHZ56_01730"
     CDS             complement(3..311)
                     /locus_tag="VHZ56_01730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296719.1"
                     /translation="MSRILNTAAEIRQWTEARSGMPAWSELPSGTRSQIVLRLVFDQY
                     LLNSGESQDLDRPGGLDLVGWDEWLGELKKQKLALRVGDRIEGVMDNDFEFVPEGTKP
                     "
     gene            complement(382..603)
                     /locus_tag="VHZ56_01735"
     CDS             complement(382..603)
                     /locus_tag="VHZ56_01735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296720.1"
                     /translation="MAQAHDRSGAMRAKLALRFESMGRPSGMPAVDQGLSPVSWSAWL
                     AELDRQQLALKVSADGDTDYELIERKTLN"
     gene            complement(752..1531)
                     /locus_tag="VHZ56_01740"
     CDS             complement(752..1531)
                     /locus_tag="VHZ56_01740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018329487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HEX4296721.1"
                     /translation="MASVPRRLIDWAAAFEDGAIIRAAFFGLLTATAVILYLDYTELM
                     GRDAAAAPPEMTPVLPAFDPNSPNGKPGPAVTTPEETLRQPLAVSLVGGGVLELTGTI
                     DAGAAQRVAAEVAAHGEYIRTVALDSPGGSVADALAIGKLIRDKGFSTSVAAGALCAS
                     SCPLVFAGGKERLATAQSAVGVHQIYAEIPVGSGSDRIEAAGAAMEQAQSMTAQISRY
                     LSGMGIADEVWLKALETPPDRLTYFSASELTGLKLVTKLTN"
     gene            complement(1531..>1941)
                     /locus_tag="VHZ56_01745"
     CDS             complement(1531..>1941)
                     /locus_tag="VHZ56_01745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296722.1"
                     /translation="SAEAVLRYWSDFIPSWAGAISIDLLPVVLVLVLMIVHDAMRRET
                     GALGAAETMSAAEMIRAMDLYRQLANRPLLDTPVAVPVVAGAAPLVETPEPAPPAVPP
                     AEPEKPAAVAPATAPAAGEATVTPLGVGRKPSRS"
BASE COUNT          296 a          697 c          636 g          312 t
ORIGIN      
        1 ccttacggct tcgtcccctc gggcacgaac tcgaaatcgt tgtccatgac gccctcgatg
       61 cggtcgccga cgcggagcgc cagtttctgc ttcttgagct cgcccagcca ttcgtcccag
      121 ccgaccaggt cgagcccgcc cgggcggtcg aggtcctggc tttcgccgga attgagcagg
      181 tactggtcga acaccagccg cagcacgatc tggctgcggg tgccgctcgg cagttccgac
      241 caggccggca tgcccgagcg ggcttcggtc cattgccgga tttccgcggc ggtgttgagg
      301 attcgcgaca tctgacgctc cagttggtcc caaaaacaag gcccggcagc gccgggcccg
      361 aacaaccaca atgcaggtgg atcagttgag agtcttgcgc tcgatcaact cataatcggt
      421 atcgccgtca gccgacacct tgagtgccag ttgctgccgg tcgagttcgg caagccaggc
      481 gctccagctg accgggctga ggccctggtc gaccgccggc atgccgctcg gccggcccat
      541 gctttcaaag cgcaacgcga gcttggcccg catcgcgccc gatcggtcgt gcgcctgcgc
      601 catggcaggc agtcccttgc ggtcggatac ccagttctgg atgtcgcggt gccgcgtcaa
      661 cgtctgtgcg tgagtcattg gttttcccct cccgacgctc atgcctgtga aacgacgcgg
      721 ttccgaatcg gttccgctcc tccacgaagc cttagttggt gagctttgtg accaatttta
      781 agccggtgag ctcggatgca ctgaaatatg tgagccggtc cggcggcgtc tccagcgcct
      841 tgagccagac ctcgtcggca atgcccatgc ccgagaggta gcgcgaaatc tgcgccgtca
      901 tcgactgcgc ctgctccatc gccgccccgg ccgcctcgat ccggtcgctg cccgagccga
      961 ccgggatttc ggcatagatc tggtgcaccc cgacggccga ctgcgccgtc gccagccgct
     1021 ccttgccgcc ggcgaacacc agcgggcacg acgaggcgca aagcgcgccg gccgcgaccg
     1081 aggtggaaaa acccttgtcg cggatcagct tgccgatggc gagcgcatcg gcgaccgagc
     1141 cgcccggcga atcgagcgcc accgtcctga tatattcgcc atgcgccgca acctccgccg
     1201 cgacccgctg cgccgcgccc gcatcgatcg tgccggtgag ctcgagcacg ccaccgccga
     1261 cgaggctgac cgccagcggc tgccgcagcg tttcttccgg cgtcgtgacc gccggccccg
     1321 gcttgccgtt gggcgagttc ggatcgaacg ccggcagcac cggggtcatc tccggcggcg
     1381 cagcggcggc atcgcggccc atcagctcgg tgtagtcgag gtagaggatc accgccgtcg
     1441 ccgtcagcag cccgaagaag gcggcacgga tgatcgcgcc atcctcgaac gccgcggccc
     1501 agtcgatcag ccgccgcggg accgaggcca tcagctgcgc gacggcttgc ggccgacgcc
     1561 gagcggggtg accgtcgctt cgcccgcggc cggcgcggtc gccggcgcca cggcagccgg
     1621 cttttcgggc tcggccggcg ggacggccgg cggcgccggt tcgggcgttt cgacaagtgg
     1681 cgctgccccg gccacgaccg gcaccgcgac aggcgtgtcg agcagcggcc ggttggcgag
     1741 ctggcggtag agatccatcg cccggatcat ctcggcggca ctcatcgtct cggccgcgcc
     1801 gagtgccccg gtctcgcgcc gcatcgcgtc gtggacgatc atcagcacca gcaccagcac
     1861 caccggcagc aggtcgatcg agatcgcccc ggcccagctc gggatgaaat cgctccagta
     1921 gcgcagcacg gcttcggccg a
//
LOCUS       DATAZA010000070         3224 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2094248, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000070 DATAZA010000000
VERSION     DATAZA010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3224
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2094248"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            53..679
                     /locus_tag="VHZ56_01750"
     CDS             53..679
                     /locus_tag="VHZ56_01750"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX4296723.1"
                     /translation="MATERLKRLPVDRREALFRTAAEEFSAQGYEGASLNRIIERAGF
                     GKSSLYYYFEDKRDLFSQLIQSVFEHFVRQIGGFDYRVLTAESFWPEIEGLFLKGVAF
                     SEGNTWYVQMGQLFYRLRAHEKRGGPTSGLLAMAEAWVASLLRHGMALGVVRTDLPEP
                     LLVQSVMALVEVCDRYFLDTWNQYGQPERRVLVAQQMALLKRVCEPVG"
     gene            799..2109
                     /locus_tag="VHZ56_01755"
     CDS             799..2109
                     /locus_tag="VHZ56_01755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEX4296724.1"
                     /translation="MALPPLHRFELATWRRRALFIVGGVVVGILAVTMAALADRAQLI
                     FAGVTSRWAWAPMLVTPLGFALCAYLTRRFFPGSQGSGIPQVIAARKLDRHEDRARLV
                     SLRLGLGKIALLMLGLLSGASIGREGPTVQVGAATMFLLGRLEPHRQPGLLLAGSAAG
                     IAAAFNAPLAGIIFGIEEMSRSFEQRSSVLVLVTVIVAGLTSMALLGDYTYFGVGHGT
                     MIAGWQWLAVPLVVVVGGLLGGVFSRVVVVVIRSAPPRLARITSGHPVLFAAFCGLLV
                     ALCGAGSGDSIFGTGYAQAQAILNAHQVPWLFGPLKLLATALSTVSGIPGGIFSPSLA
                     VGAGLAYNLSALAPGVPIDTLAILCMAAYLAGVVQAPLTSAVIVSEMTADHSLILPIM
                     ICALGASAVSRLVSPEGIYHALAAGLLPEDPAAPAPVGEAGTTG"
     gene            2299..>3224
                     /locus_tag="VHZ56_01760"
     CDS             2299..>3224
                     /locus_tag="VHZ56_01760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296725.1"
                     /translation="MKTHLSAAVAAVILLALPSLALAQAAPAATVQFTTVADMQTLKD
                     VSKQDHFTVGLTDAQIKSNIILSCTAGHTDLFVIKKDKVCAFQNGSGSSIVNPKNGQL
                     LPRTQFVGSYTVTADGTTDGTAMSLNYLALGTVPASQAQFGGSLNLKPELTSTGAAGL
                     KDLVMKKLQGSSTSPINTAVDTIDFNHFFVPGAGLPSDKGCTWDGNAVFAYQTYSWFF
                     KISAQCADKTYQFTGNMPFTNTPNTSDQTQYDLVLTEPSSTNSSDDALFANAGNDGDL
                     FATVDGIAGQILMKNSNNVTVTVDNNPVTTPA"
BASE COUNT          515 a         1080 c         1070 g          559 t
ORIGIN      
        1 taccggtggt acacatttat ggtacagacg atggcgcacg gcaagtcgaa tcatggccac
       61 tgaaagactg aagcggctgc cggtggaccg ccgcgaggca ctcttccgca cggcagcgga
      121 ggagttcagc gcgcaggggt atgagggggc ctcgctcaac cgcatcatcg agcgagcggg
      181 cttcggcaag agctcgctct actattactt cgaggacaag cgggaccttt tcagccagct
      241 cattcaatcg gtattcgagc acttcgtgcg ccagatcggc ggcttcgact atcgggtgct
      301 caccgccgaa agcttctggc cggagatcga gggcctgttc ctcaagggcg tcgcgttttc
      361 ggagggcaac acctggtacg tgcagatggg ccagttgttc tatcgcctgc gcgcccacga
      421 gaagcggggc gggccgacga gcggcctgct ggcgatggcg gaagcgtggg tggcatcgct
      481 gctgcggcac ggcatggcgc tgggcgtcgt gcggacggac ctgccggagc cgctgctggt
      541 gcagtcggtg atggcactgg tcgaggtctg cgaccggtat tttctcgaca cctggaacca
      601 gtacggccag cctgaacgac gggtgctggt cgctcagcag atggcgctcc tgaaacgggt
      661 gtgcgagccg gtgggctgag cgggcgccgg gcgagcttgc ggcgctatcg tcggtccgcc
      721 gcttgccacg ggcggaaggc gcacgctatc tgacatgacg ctgcagccga cgctgccccg
      781 cgctcgctcg aacggtccat ggctctccca ccccttcatc gatttgaact ggcgacctgg
      841 cggcggcgag ccctcttcat cgtcggcggc gtcgtggtcg ggatcctcgc cgtgacaatg
      901 gcggcacttg ccgatcgggc gcagttgatc ttcgccggcg tcacgtcgcg ctgggcctgg
      961 gcaccgatgc tggtcacgcc actcggattt gcgctctgtg cctacctgac gaggcgattc
     1021 ttcccgggct cgcaggggag cggcattccg caggtcattg ccgcgcgcaa gctcgatcgg
     1081 cacgaggatc gcgcccggct ggtctcgctc aggctggggc tcggaaagat cgcgttgctc
     1141 atgctcgggc tgctgagcgg agcctcgatc ggacgcgaag ggccaaccgt ccaggtcggg
     1201 gcggcgacga tgttcttgct ggggcggctc gagccgcatc gccagcccgg gctgctgctc
     1261 gccggctcgg cggcaggcat cgccgcggcc ttcaacgcgc cgctggccgg gatcatcttc
     1321 ggcatagagg aaatgagccg gtcgttcgag caacgctcga gcgtgctggt gctggtaacg
     1381 gtgatcgtcg ccgggctgac gtcgatggcg ctgcttggcg actacaccta tttcggcgtc
     1441 ggccacggca cgatgatcgc cggctggcag tggctggcgg tgcccctcgt cgtggtggtc
     1501 ggcggcctgc ttggcggcgt gttcagccgc gtcgtggtcg tggtgatccg cagcgcgcca
     1561 ccgcggctgg cgcgcatcac cagcggccac cccgtgctgt tcgccgcgtt ctgcggattg
     1621 ctggtggcgc tgtgcggggc cggcagcggc gacagcatct tcgggacggg ctatgcccag
     1681 gcccaggcca ttctcaatgc ccatcaggtg ccgtggctgt tcgggccatt gaagctgctg
     1741 gcaacggcac tgtcgacggt gagcggcatt cccggcggca tcttttctcc ctcgctcgcg
     1801 gtgggggcgg ggctggccta caatctgtct gcccttgcac cgggcgtgcc gatcgacacg
     1861 ctcgccatcc tctgcatggc ggcctacctc gcgggcgtgg tccaggcgcc gctcacctcg
     1921 gcggtgatcg tctcggagat gacggccgac cacagcctca tcctgccgat catgatctgc
     1981 gccctcggcg cgagcgccgt gtcgcggctg gtcagtcccg agggcatcta tcacgcgctg
     2041 gcggcgggcc tgctgccgga ggacccggcg gcgccggcac ccgtcggtga agccggaaca
     2101 accgggtgac ccagggggcc cgccgcatgt ccgcgcaatc tgcgcgacat gcggcgccca
     2161 ctcttcagcc taaattcatc tccaccttcg tagcgatggc gcgccgcgcg aaggcgcgag
     2221 cggcgcgagc cgggggccgg acgcgtcagg ccgcgatctg cggcatccag caatcgtgct
     2281 gaaccaaggg agacttcttt gaaaacacat ctcagtgccg ccgtggcggc cgtcatcctg
     2341 ctggcgcttc cgtcgctggc cctggcgcag gcagccccgg cggcgaccgt gcagttcact
     2401 accgtcgccg acatgcagac gctgaaggac gtgtccaagc aggaccattt caccgtcggc
     2461 ctgaccgacg cgcagatcaa gagcaacatc atcctgtcgt gcaccgccgg ccacaccgac
     2521 ctgttcgtga tcaagaagga caaggtctgc gccttccaga acggctcggg cagcagcatc
     2581 gtcaacccca agaacggcca gctgctgccg cgcacgcagt tcgtcggttc ctacaccgtc
     2641 actgccgacg gcacgaccga cggcacggcg atgtcgctca actacctcgc gctcggcacc
     2701 gtgccggcgt cgcaggcgca gttcggcggt tcgctcaacc tcaagccgga gctcacctcg
     2761 acgggcgccg cggggctcaa ggacctggtg atgaaaaagc tccagggtag cagtacgtcg
     2821 ccgatcaaca ccgccgtcga caccatcgac ttcaaccatt tcttcgtgcc gggcgccggc
     2881 ctgccgtccg acaagggctg cacctgggac ggcaacgcgg tgttcgccta ccagacctat
     2941 tcgtggttct tcaagatttc cgcgcagtgc gccgacaaga cctaccagtt caccggcaac
     3001 atgccgttca ccaacacgcc caacacctca gaccagacgc agtacgatct ggtgctcacc
     3061 gagccgtcgt cgaccaacag cagcgacgac gcgctgttcg ccaatgccgg caatgacggc
     3121 gacctgttcg ccacagtcga cggcattgcc ggccagatcc tgatgaagaa ctccaacaac
     3181 gtcaccgtca cggtcgacaa caatccggtc accacgccgg ccta
//
LOCUS       DATAZA010000071         1613 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2558143, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000071 DATAZA010000000
VERSION     DATAZA010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2558143"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..384
                     /locus_tag="VHZ56_01765"
     CDS             <1..384
                     /locus_tag="VHZ56_01765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug ABC transporter ATP-binding protein"
                     /protein_id="HEX4296726.1"
                     /translation="QAAGVTIILTTHYIEEAEQMADRIGVINKGEIILVEEKAGLMQK
                     LGRKQLKLHLQGRIEAIPPELAPYNLELSGDGNELTFSYDTKGERTGITSLLGDLRTA
                     GIRFYDLDTNQSSLEDIFVSLVRAP"
     gene            381..1142
                     /locus_tag="VHZ56_01770"
     CDS             381..1142
                     /locus_tag="VHZ56_01770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4296727.1"
                     /translation="MNFRAVGAIYKFEMARTWRTLLQSIVSPVVSTSLYFVVFGAAIG
                     SRITQVDGVSYGTFIVPGLVMLSVLTQSIANASFGIYFPKFVGTIYEILSAPISYFEI
                     VLGYVGAAATKSIVLGLIILATAGLFVPLHIHHPVWMLTFLVLTAVTFSLFGFIIGIW
                     ADGFEKLQMIPMLVVTPLTFLGGSFYSVNMLPSGWRTITLLNPVVYLISGFRWSFYEI
                     ADVSVALSVGVTVGFLVVCMILVWWIFKTGYRLKN"
     gene            complement(1252..1575)
                     /locus_tag="VHZ56_01775"
     CDS             complement(1252..1575)
                     /locus_tag="VHZ56_01775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296728.1"
                     /translation="MKSRVRAMPLPASPRLKTYFAAAALALALLAVPHYGHAQGIVGG
                     AREGAREGGRDAGPVGAVVGGAVGAGVGGAVGAVDGVLGLPQHRYRHGCRGFYDRYNR
                     FHCYR"
BASE COUNT          296 a          537 c          473 g          307 t
ORIGIN      
        1 caggccgccg gcgtcaccat catcctgacc acgcattaca tcgaggaggc cgagcagatg
       61 gccgaccgga tcggcgtgat caacaagggc gagatcatcc tggtcgagga aaaggccggg
      121 ctgatgcaga agctcggcag gaagcagctc aagctgcatc tgcagggcag gatcgaagcg
      181 atcccgccgg agcttgcgcc ctacaacctc gaactctcag gggacggcaa cgaattgacc
      241 ttcagctacg acaccaaggg cgagcgcacc ggcatcacca gcctgctcgg cgatctccgg
      301 accgccggca tccgcttcta cgacctcgat accaaccagt cgtcgctgga agacatcttc
      361 gtcagcctgg tgcgggcacc atgaatttcc gggcggtcgg cgcgatctac aagttcgaaa
      421 tggcgcgcac ctggcgcacg ctgctgcaaa gcatcgtctc gccggtggtt tcgacctcgc
      481 tttatttcgt ggtgttcggc gcggcgatcg gttcgcgcat cacccaggtc gacggcgtca
      541 gctacggcac cttcatcgtg ccgggcctcg tgatgctgtc ggtgctgacc caaagcatcg
      601 ccaatgcctc gttcggcatc tacttcccca aattcgtcgg caccatctac gaaatcctgt
      661 cggcgccgat ctcctatttc gagatcgtgc tgggctatgt cggggcggcc gcgaccaaat
      721 ccatcgtgct cggtctgatc atcctcgcca ccgccggcct gttcgtgccg ctgcacatcc
      781 accatccggt gtggatgctg accttcctgg tgctgacggc ggtgacgttc agcctgtttg
      841 gcttcatcat cggcatctgg gccgacggct tcgagaagct gcaaatgatt ccgatgctgg
      901 tggtgacgcc gctgaccttc ctcggcggca gcttctattc ggtcaacatg ctgccgtcgg
      961 gctggcgcac catcacgctg ctcaaccccg tggtctatct gatcagtggc ttccgctgga
     1021 gcttttacga gatcgccgac gtcagcgtcg ccctgagcgt cggcgtgacc gtcggcttcc
     1081 tggtcgtctg catgatcctg gtgtggtgga tcttcaagac cggctaccgg ctgaagaact
     1141 gaggctgcca tcgggacgat gcgcaacatc aaacccggaa atcgcacgcc tgttgcaaac
     1201 ctgtccgatg tgcggtttca catcggacag gatcagcgat agcagcggaa attatcgata
     1261 gcagtggaaa cggttgtagc ggtcgtagaa gccgcggcag ccatggcggt agcgatgttg
     1321 cggcaagcca agcacgccgt cgaccgcgcc aaccgcgccg ccaacccccg cgccgaccgc
     1381 gccgcccacg accgcaccga ccgggcctgc atcacgtccg ccttcacggg caccttcccg
     1441 cgcaccgccg acgatgccct gggcatgtcc gtaatgcggc acggccagca atgcgagcgc
     1501 cagcgccgcg gccgcgaaat aggtctttag tctcgggctc gccggcagcg gcatcgcccg
     1561 aaccctgctc ttcatctcat tcatgtgaat tccccgtgaa ccaaggcgac cca
//
LOCUS       DATAZA010000072        13019 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1281868, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000072 DATAZA010000000
VERSION     DATAZA010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 13019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13019
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1281868"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..632)
                     /locus_tag="VHZ56_01780"
     CDS             complement(<1..632)
                     /locus_tag="VHZ56_01780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006329963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4296729.1"
                     /translation="MRLLRAIASHPSGRIGAAIIGLYLLLAVLGAIGLTPHNALKQFP
                     IDRLKPPSANYWFGTDLLGRDTFSRLMLGIGESFIVAFSSVAIAAAAGTLIGLVAAWF
                     GALWDGVLMRLMDVLLAFPAILLALLIVAIAGPGMETSIIAIGIVYTPIFARVVRAPA
                     LSLKAREFVDAARTFGSSRRYILTRHLLLNLVAPLTVQITLALAWALLTEA"
     gene            complement(632..1585)
                     /locus_tag="VHZ56_01785"
     CDS             complement(632..1585)
                     /locus_tag="VHZ56_01785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013896855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4296730.1"
                     /translation="MNYVTQRLLTFPLILLGVSVLVFVAIRLVPGDAITAMLGTEAGL
                     LTPAQRASLAAYFGIDQPIVTQYLHWLAGLFRGDLGISVTYGKPVLPVILERFPLTLE
                     LSLLSMLIALAVGIPAGVFAATRNERPADLVVRLFAMLGQSTPSFVIGLVVIYLLSTV
                     FHVLPTMGSFVPLSVDPIGNLEQMILPAITLGFAFAASVTRIARSTMIEVLGDDYVRT
                     ARSKGASQRRVVWRHALPNALIPVVTLSGVEFGYLLGGAVIVEQIYALPGLGRLTLDA
                     ISQRDYPLVEGSVLFIAFNFLVVNLLVDLAYVALDPRIRLS"
     gene            complement(1687..3210)
                     /locus_tag="VHZ56_01790"
     CDS             complement(1687..3210)
                     /locus_tag="VHZ56_01790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009451937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4296731.1"
                     /translation="MHWTHSKQLLAGLAVATLLGATSLALPAQAATLRMAWAQDATGL
                     DPHKQTAFSSLSLLDLIYEPLVRLDAQLAVTPDVAQSWTFSPDGMTLTFKLDPKSKFS
                     TGDQVTSDDVKASFTRILDEATGAATRSNFLSIKSIDTPDPETVVFNLSQPDAPILIA
                     MATVNAAIVPAKEITAGTIGTKAIGTGPFQLTEWDPNSKDVLTANPNWAGGKTGVDGI
                     TISVLPSESAILDSMRANQTDFALLNDPTVATLVPSEPTMQLIREPGLAYNALQLNPA
                     RKPMDNLMVRQAISCAVNRQEVIDTALVGEGKVTGPLTMPAFASDPSTLFCYKQDVDK
                     AKDLMKQAGMESGFDATVIAATGEPPYAANEAQVLQSQLAAINVRLTIKTMDIKPYVD
                     AWLAGDFDMAVALNGGRPDPYPMYNRYFTKDGNLVKVSNFTDDQLDSLMQQGRVETDP
                     AKRKAIFQQFEQRLAELSPWIWLSTGYNYTAQLKTVQGFVPTPTGSLYGLAKVTVGQ"
     gene            3452..4477
                     /locus_tag="VHZ56_01795"
     CDS             3452..4477
                     /locus_tag="VHZ56_01795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015242801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000976 - transcription cis-regulatory
                     region binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX4296732.1"
                     /translation="MVAVAEAAKVSIFTVSAVINGTSVVSDELRLRVEAAIRTTGYKR
                     NAVARSLKTGRTQTVGVVIGDITNPFYTDVVAAVQQVLYRAGYGVMLCCNDRNVTLQR
                     DHIAVLHDRMVDGLIIAPTGDDEQLRTALEQTHLPVVLIDRILDGLECDAVVIDNRSA
                     VIGAMRYLLSLGHRRIGFVAGMFESFTGRERLAGYHAALGENGVDYEPDLVQLGNFRI
                     DDAYNATLRLMMLPNPPTAVFSSNNLMVIGVMKALAHLGLRCPDDVSVAGLDDFPWAD
                     AFRPQLTAVAQPTRAIGEQAANLLLDRLNGSASGKGRRTVLDAVLRVRESCRPISAAE
                     RAARPGQ"
     gene            4574..5356
                     /locus_tag="VHZ56_01800"
     CDS             4574..5356
                     /locus_tag="VHZ56_01800"
                     /inference="COORDINATES: protein motif:HMM:NF018757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine amidotransferase"
                     /protein_id="HEX4296733.1"
                     /translation="MAKKPAKILIVGESVFKIHTHFKGFASYETGYASLGLDGFIDRF
                     AGTGIDITFMPNQEVSLRFPSSLAAMQAYDVIVISDAPADSFLLHPDTLAGAIMPNRL
                     KLIGDYVRGGGGFAMIGGWMAFGGFHGKAHYAYSPLAELLPVSIAPHDDRMEIPEGIY
                     PALAGAAHPIVAGLPAEWPDFLGYNKVGQRGGQRLLEFPTTGDPLLIVDEIGSGRIAC
                     FTSDILPHWGSPRFTAWPGYVQFWEQLFRWLARKEATEGDRS"
     gene            5353..6375
                     /locus_tag="VHZ56_01805"
     CDS             5353..6375
                     /locus_tag="VHZ56_01805"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HEX4296734.1"
                     /translation="MIGQVRLKGSVETPWLQSRVLQGNLPGDATERMLPIYLPPGYAG
                     SGKRYPVIYVLAGHGGSGPLLLNSPAWGESFPERLDRLIASGRVPPVIAVLPDCWTIF
                     GGAQYINSSALGQYEDYLIDELVPYVDRTYRTIADRAHRGVMGKSSGGYGAMVQAMRH
                     PETFGAFASHSGDIYFEYGLLPDLAKLHANLQKFGGLEGYISQIPTIRPKGHDPFFSV
                     LGMLCYGAAYAPNPKAHRGFDFPVDMETGALVDDVWQRWLAWDPVRMIDRPEYLEAWR
                     SMSYIYLDCGLWDELNFPVGTRVLSNKLKAAGIKHDFELFPDGHIDVPYRQDVSLPRL
                     AGALVD"
     gene            6381..7955
                     /locus_tag="VHZ56_01810"
     CDS             6381..7955
                     /locus_tag="VHZ56_01810"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007880879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX4296735.1"
                     /translation="MLVADELDGLIAYEIGDKAIPSISYALFDANGILEQRHVVRSGA
                     LGDNALFRIGSISKTFAAVAALQLVEAGQLDLDADIARYLPGFAPIDPWHGGPVTLRK
                     LLGHRAGLTREAAAGHYLDDRAVPLAETVAGLGRSTLKAPGDGSSYFYSNAGYAVVGA
                     AVEAAAGRPYAEHLQAAIFAPLGLADTGIALTPEIRARLAPALMWTADADFPAPVFDL
                     GGAAAGNIVASLSDVARWGRMLLRGDEGLVSPAALAAMWTPGGADPAKGYGLGFAVDH
                     LDGRRTVGHGGVVYGYASSMLLLPDAGLGVVMLSTLDFTNELIGRLARRALRLALAGR
                     GERPRPRPARRLPPPGVTLAAELAGTYRAEDGRLLELRASGLRLTLVDAGVPIEIRPI
                     GQGRFVLDGRIFGEETTHPAPLLEVLGTTLGWQGARWQRVDGPVAEPIPAEFAVHLGT
                     YGPAFMPVDLQWSGGGLLCLLEYFAPHRCEPLGDSRFLLHGGLYEREILELGLLDAEG
                     RPAIRVGEMLLGKRVP"
     gene            8082..9356
                     /locus_tag="VHZ56_01815"
     CDS             8082..9356
                     /locus_tag="VHZ56_01815"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HEX4296736.1"
                     /translation="MDQQADIGRLGLARRPHILPLRQQSALITEMVRGRLDTILPAAM
                     ADADIDAWLILCQEDNPDPLFLTMIPFDNWHPILSVLLFVRDGQAIRRYNLCGTDTKD
                     LYERPYTGQLEDKQWPLLLDLLAQHDPQRIGINIGTVAWAAGSLTHVLYQQLTDRLPA
                     KYRDRLVSAEKAAVRWGGTMTDAEAVLFKRVTELGQYMIGECFSARTITPGVTTIDDL
                     VWHYYQHTRDIGLDVAFRPYFRIHRDSRDTRYPDNVVAPGDVIHCDVGIKYMRFNSDH
                     QYVAYVPRLGETGPSAGLRARLADNNRLQDIYMAGFTYGLSGNEMLRNMLNRAHAEGV
                     PNPKIYSHNLGLFLHQPGPLIGLPWDQDAALPRGEVRLEYNSAFVMELSTEAPVPEWG
                     GQMLRLGTEEPVIFTRDGCRTLCGRQTEFCVI"
     gene            9454..11124
                     /locus_tag="VHZ56_01820"
     CDS             9454..11124
                     /locus_tag="VHZ56_01820"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX4296737.1"
                     /translation="MTFHSVPRRALWLGLAAAALSTTALTAPALADKVLVLPVGVGAV
                     GASVALDNLDPRVLLTTAHQAVQMAIFDSLVRSKGPDIVPAAAEKWEISADGKTYTFH
                     LRDEKWSDGKAVTAQDFVDAFVRMFTTSPASGIYDAIQNGAAVRGKTADASTLGVKAV
                     DDKTLVITLTSPTPYFLGLLTSAYSAPSRQDLIDKEGEKYGTTADSMAYNGPFMLTEW
                     ENQDKLVLKKNPNYWDAKDINLDEVDFLVIPDQNTQRNLYDNGQLDVYAPATETEAKD
                     YEAKGQLLRYNKGGLRDITLNHLGQGDATKAKLFSDPNFMKWISNSIDRQGFVDKVLE
                     GNGIAATVQTPAATSVYPGTTWGQVDMANVGKYHPLTADPAQADAYKAKVLADMGVTS
                     VDQLPAFKMLTSEDPSNPKLMTPYVLSVLTQMGLKVTLDQETGNQYWNTLLYPARAYD
                     IAIAGWGPDYDDPFTYMQYWQTSSTDMGTTFNNADYDKMLQDANNETDLKKRADMLVK
                     AEALFSDIGTSIPLLHYKGEAAIQPYVKGITTSSFGVSINYVYADIQK"
     gene            11179..12093
                     /locus_tag="VHZ56_01825"
     CDS             11179..12093
                     /locus_tag="VHZ56_01825"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4296738.1"
                     /translation="MVSYIFRRLLIALVAIFLLATVTFFLMRLVPGDPFAGPRVAPEI
                     RTALRIQYGLDKPLLQQYLLYMWNLLHGDLGLSLASRGHPVTDIIAQAAPVSVDLGLR
                     AMLISITLGLAFGIVAALNRGTLLDYLTVILVLIGISMPSFVVAGLLQYYFGVYWHVL
                     PIARWENFQSTIMPAFALSLGTMATIARYMRASMLEIVHADYIKTAFAKGLLPHQVVI
                     RHQVRNALFPILTILGPAVAQVLTGSFVVETVFAIPGLGRYFVTAMQNLDYTLVMGLT
                     IFFGAFLIAMNFLVDVAYGLIDPRIRTA"
     gene            12096..13010
                     /locus_tag="VHZ56_01830"
     CDS             12096..13010
                     /locus_tag="VHZ56_01830"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4296739.1"
                     /translation="MVAIDPSLFEPDRDAHVDVLAGRPALAFWSDVWRRFRRNIPAMA
                     SLVLLVVFGLLAIFAPIVGGKSWDTPDLFSTYLQPSWQHWFGTDALGRDMWLSVWAGA
                     RVSLTVGLVAALCQMLIGVLIGSFSGLAGGRIDMVIMRFVDIMISIPFLIWVSLFMLV
                     LTPGIGSIIIAFALTQWTDIARLTRAEVLKLRRTEFVIASSAMGAGSWRLITRHFFPN
                     ILPVIIVAVTFQVTNAIFGEAFLSYIGLGIQAPLTSWGLLVSMGIKEMRDNPYILIFP
                     SLAISLTMLSLQLIGDGLRDATDPRLRR"
BASE COUNT         2116 a         4613 c         4111 g         2179 t
ORIGIN      
        1 gcctcggtca gcagcgccca tgccagcgcc agcgtgatct gcaccgtcag cggcgccacg
       61 agattgagca gcagatggcg ggtaaggata tagcgccgcg agctgccgaa ggtgcgcgcc
      121 gcgtcgacga attcgcgggc cttgaggctg agcgccgggg cccgcacgac acgggcgaag
      181 atcggcgtgt agacgatgcc gatggcgatg atgctggtct ccatccccgg cccggcgatg
      241 gcgacgatca gcagggccag gaggatcgcc gggaacgcca gcagcacgtc catcagccgc
      301 atcagaacgc cgtcccagag cgcgccgaac caggcggcaa ccagcccgat cagcgtcccg
      361 gcggccgccg cgatcgccac cgacgagaat gccacgatga acgattcgcc gatccccagc
      421 atcagccggc tgaaagtgtc gcggccgagg aggtcggtgc cgaaccagta gttggcactt
      481 ggcggcttca gccggtcgat cgggaactgc ttgagcgcat tgtgcggcgt gaggccgatg
      541 gcgccgagca ccgccagcag caggtagagt ccgatgatcg cggcgccgat ccggccgctc
      601 gggtggctgg cgatggcgcg cagcaggcgc atcaggagag ccggatccgc gggtcgagcg
      661 ccacataggc gaggtcgacc agaagattca cgacgaggaa gttgaaggcg atgaacagca
      721 cgctgccctc gaccagcgga tagtcgcgct gcgagatggc gtcgagcgtc agccggccga
      781 ggccggggag ggcatagatc tgctcgacga tcaccgcgcc acccagcaga tagccgaact
      841 cgacgccgct cagcgtcacc acggggatca gcgcgttggg cagcgcgtgc cgccacacga
      901 cccgccgctg cgaggcgccc ttgctccgcg ccgtgcgcac ataatcgtcg cccagcactt
      961 cgatcatggt cgagcgcgcg atgcgcgtca ccgacgcggc gaaggcaaag cccagggtga
     1021 tcgccggcag gatcatctgc tccaggttgc cgatcggatc gacgctcagc ggcacgaacg
     1081 agcccatcgt cggcaggacg tggaacaccg tcgacagcag gtagatgacg acgagcccga
     1141 tgacgaagct cggcgtcgat tggccgagca tggcgaacag ccgcaccacg agatctgccg
     1201 gccgctcgtt gcgcgtcgcc gcgaacacgc ccgccggaat gcccaccgcg agcgcgatca
     1261 gcatcgacag caacgacagc tcgagggtca gcgggaagcg ctcgaggatc accggcagca
     1321 ccggtttgcc gtaggtcacc gagataccga ggtcaccccg gaacaggccg gccagccagt
     1381 gcaggtactg cgtgacgatc ggctggtcga tgccgaaata ggccgcgagc gaggcccgct
     1441 gcgccggcgt cagcaggccg gcctcggtgc cgagcatcgc cgtgatcgcg tcgcccggca
     1501 ccagccggat ggcgacgaac accagcaccg acacgccgag caggatgagc ggaaacgtca
     1561 gcagccgctg cgtcacgtaa ttcatcggcc gcagctctcg ccgtcagcga tccgccgccc
     1621 gcttacgtcg ccttcggcgg cacctccccc cacgccgcgc gcgggaggag gagaagcaga
     1681 caccacctac tgcccgaccg tcaccttcgc cagcccgtag agcgagccgg tcggggtcgg
     1741 cacgaagccc tgcacggtct tcagctgtgc cgtgtagttg tagccggtcg acagccagat
     1801 ccagggcgac agttccgcca gccgctgctc gaactgctgg aagatcgcct tgcgcttcgc
     1861 cggatcggtc tcgacgcggc cctgctgcat caggctgtcg agctggtcgt cggtgaagtt
     1921 cgagaccttc accagattgc cgtccttggt gaagtagcgg ttgtacatcg gataggggtc
     1981 cggccgcccg ccgttgagcg ccaccgccat gtcgaaatcg ccggcgagcc aggcgtcgac
     2041 atagggcttg atgtccatgg tcttgatggt cagccgcaca ttgatggcgg cgagctggct
     2101 ctgcagcacc tgcgcctcat tggcggcata gggcggctcg ccggttgccg cgatcaccgt
     2161 cgcgtcgaag ccgctctcca tgcccgcctg cttcatcagg tccttggcct tgtcgacgtc
     2221 ctgcttgtag cagaacagcg tgctcggatc gctggcgaag gccggcatgg tgagcggtcc
     2281 ggtgaccttg ccctcgccga cgagcgcggt gtcgatcacc tcctgccggt tgacggcgca
     2341 ggaaatcgcc tgccgcacca tcaggttgtc catcggcttg cgcgccgggt tgagctgcag
     2401 cgcgttgtag gcgaggcccg gctcgcggat gagctgcatg gtgggctcgc tcggcaccag
     2461 cgttgccacc gtcggatcgt tgagcagcgc gaaatcggtc tggttggcgc gcatcgaatc
     2521 gaggatggcg ctttcggatg gcagcaccga gatggtgatg ccgtcgacgc cggtcttgcc
     2581 gccggcccag ttcgggttgg cggtgaggac gtccttggag ttggggtccc attcggtcag
     2641 ctggaacggg cccgtgccga tcgccttggt gccgatggtg ccggcggtga tctccttggc
     2701 cggcacgatc gccgcgttca ccgtcgccat ggcgatcagg atcggagcat ccggctgcga
     2761 caggttgaac accaccgttt ccggatcggg cgtgtcgatg gatttgatcg agaggaagtt
     2821 ggagcgcgtc gcagcgcccg tcgcctcgtc gaggatgcgg gtaaacgacg ccttgacgtc
     2881 gtccgacgtc acctggtcgc cggtcgagaa tttcgacttc gggtcgagct tgaaggtgag
     2941 cgtcatcccg tccggcgaga acgtccagct ctgcgccacg tccggggtca cggcgagttg
     3001 cgcgtccagc cggaccagcg gctcatagat gaggtcgagc agcgacagcg acgagaaggc
     3061 cgtctgcttg tgcgggtcga gcccggtcgc gtcctgcgcc cacgccatgc gcagcgtcgc
     3121 cgcctgtgcc ggcagcgcca ggcttgtcgc gcccagcagc gtcgccacgg cgagccctgc
     3181 caagagctgc ttcgaatgtg tccagtgcat gttgttctcc cgagccttca ttcttgagcg
     3241 cggcggcgtt gccgtgtcac gctgccgcga gcttacgagc cgcggcggca aactgcacgt
     3301 cgaaaaaccg ccggatctgt ccggctgtcc cgccgacgtt cgggatggct tgcctttccg
     3361 gccaagtaat tctagcgctc ggcacatggc aaacgcagca cccccggtga aacgccgcgc
     3421 ccgctcgccg cgcaaggcct cggccccgac aatggtcgcg gtcgccgagg cagcaaaggt
     3481 ttcgatcttc actgtatcgg cggtgatcaa cggcacttcg gtggtgagcg atgagctgcg
     3541 cctgcgcgtc gaggcggcga tccgcaccac cggatacaag cgcaatgcgg tggcgcgcag
     3601 cctcaagacc ggccgcaccc agaccgtcgg cgtcgtcatc ggcgacatca ccaatccgtt
     3661 ctacaccgac gtcgtggccg cggtgcagca ggtgctgtac cgcgccggct atggcgtcat
     3721 gctgtgctgc aacgatcgca acgtgacgct gcagcgcgac cacatcgcgg tgctgcacga
     3781 ccgcatggtg gatgggctca tcatcgcgcc gaccggcgac gacgaacagc tgcgcaccgc
     3841 cctcgagcag acgcacctgc cggtggtgct gatcgaccgc atcctcgacg gcctcgaatg
     3901 cgatgccgtg gtcatcgaca accgctcggc ggtgatcggc gccatgcgct acctgctcag
     3961 cctcggccat cgccgcatcg gcttcgtcgc cggcatgttc gagagcttca ccggccgcga
     4021 gcgcctcgcc ggctatcacg ccgcgctcgg cgagaacggc gtcgactacg aacccgacct
     4081 ggtgcagctg ggcaatttcc gcatcgacga cgcctacaac gccacgctgc ggctgatgat
     4141 gctgcccaac ccgccgaccg cggtgttttc gtccaacaac ctcatggtca tcggcgtcat
     4201 gaaggcgctg gcccatctcg gcctgcgctg ccccgacgac gtgtcggtcg ccgggctcga
     4261 cgactttccc tgggccgacg cctttcgtcc gcagctcacc gccgtcgcgc agccgacccg
     4321 cgccatcggc gagcaggccg ccaacctcct gctcgaccgg ctcaacggca gcgcctccgg
     4381 caagggtcgc cgcaccgtgc tcgatgccgt gctcagggtg cgcgaatcct gccggcccat
     4441 ctccgccgcc gagcgcgccg cgcggcccgg gcaataaacc gctggacaag ccagccgctc
     4501 tcggcttctc tccgcctaaa cgttaagatc acgcaccgtg cgtggcggaa atcgagggag
     4561 cgtcgggcgg caaatggcga aaaagcctgc caaaatcctc atcgttggcg aatccgtttt
     4621 caaaatccat acgcatttca agggcttcgc gtcctatgag actggctatg cttcgttggg
     4681 gctcgatggc ttcatcgacc gctttgccgg caccggcatc gacatcacct tcatgcccaa
     4741 ccaggaggtg tcgctccgct ttccctcgtc gctcgcggcc atgcaggcct acgacgtgat
     4801 cgtcatttcg gacgcgccgg ccgactcgtt cctgctccat cccgacacgc tggccggcgc
     4861 catcatgccc aaccggctga agctcatcgg cgactacgtc cgcggtggcg gcggctttgc
     4921 catgatcggc ggctggatgg cgttcggcgg cttccacggc aaggcgcact acgcctactc
     4981 cccgctcgcc gagttgctgc cggtcagcat cgcgccgcac gacgaccgca tggaaatccc
     5041 cgaaggcatc tatcccgcgc tcgccggcgc ggcgcacccg atcgtcgccg gcctgccggc
     5101 cgagtggccc gatttcctcg gctacaacaa ggtgggccag cgcggcggcc agcggctgct
     5161 cgagttcccg accaccggcg atccgctgct gatcgtcgac gaaatcggca gcggccgcat
     5221 cgcctgcttc acctccgaca tcctgccgca ctggggctcg ccgcgcttca ccgcatggcc
     5281 cggctacgtg cagttctggg agcagttgtt ccgctggctc gcccgcaaag aggcgactga
     5341 gggagatcga tcatgatcgg acaggtccgg ctcaagggct cggtcgagac gccgtggctg
     5401 caaagccgcg tgctgcaggg caacctgccg ggggacgcca ccgagcgcat gctgcccatc
     5461 tacctgccgc ccggctatgc cgggtccggc aagcgctacc cggtgatcta cgtgctcgcc
     5521 ggccatggcg gcagtggccc gctgctgctc aattcgccgg cctggggcga gtcgtttccc
     5581 gagcggctcg accggctgat cgccagcggc agggtgccgc cggtgatcgc cgtgctgccc
     5641 gattgctgga ccattttcgg cggtgcccag tacatcaaca gctcggccct cggccagtac
     5701 gaggactacc tcatcgatga gctggtcccc tacgtcgacc gcacctaccg caccatcgcc
     5761 gatcgcgcgc atcgcggcgt catgggcaag tcgagcggcg gctacggcgc catggtgcag
     5821 gccatgcgcc accccgaaac cttcggcgcc ttcgcgtcgc attcgggcga catctatttc
     5881 gagtacggcc tcctgcccga tctcgccaag ctgcacgcca atctgcagaa attcggcggc
     5941 ctcgagggct acatctcgca gatcccgacc atccggccga agggccacga cccgttcttc
     6001 tcggtgctcg gcatgctgtg ctacggcgcc gcctacgccc ccaatcccaa ggcgcatcgc
     6061 ggctttgatt tcccggtcga catggagacc ggcgcgctgg tcgatgacgt ctggcagcgc
     6121 tggctggcct gggacccggt gcgcatgatc gaccggcccg aatacctcga ggcctggcgg
     6181 tcgatgagct acatctatct cgactgcggt ctctgggacg agctcaactt tcccgtcggc
     6241 acgcgcgtcc tctccaacaa gctgaaggcg gcgggcatca agcacgattt cgagcttttc
     6301 ccggatggcc acatcgacgt gccgtaccgc caggacgtgt cgctgccgcg gctggccggc
     6361 gcgctcgtcg actgatttcc atgctggtcg ccgacgagct cgacgggctc atcgcctatg
     6421 agatcggcga caaggccatc ccgtcgatct cctatgcgct gttcgacgcc aacggcattc
     6481 tcgagcagcg ccatgtggtg cgctcgggtg cccttggcga caacgcgctg ttccgtatcg
     6541 gctcgatcag caagacgttt gccgccgtcg cggcgctgca gctggtcgag gccggccagc
     6601 tcgatctcga cgccgacatc gcccgctatc tgcccggctt cgcgccgatc gatccctggc
     6661 acggcggccc ggtgaccctg cgcaagctgc tcggccatcg cgccgggctg acccgcgagg
     6721 cggcggccgg ccactatctc gacgaccgcg cggtgccgct cgccgaaact gtcgccggcc
     6781 tcggccgctc gacgctcaag gcgccgggcg acggctcgtc ctatttctat tccaacgccg
     6841 gttatgccgt cgtcggcgcg gcggtcgagg ccgccgccgg ccgcccctac gccgagcatc
     6901 tgcaggcggc gatcttcgcg ccgctggggc tcgccgacac cggcattgcc ctcacccccg
     6961 aaatccgtgc ccggctggcg ccggcgctga tgtggaccgc cgacgccgat tttccggcgc
     7021 cggtcttcga tctcggcggc gccgcggccg gcaatatcgt cgccagccta agcgacgtcg
     7081 cgcgctgggg ccggatgctg ctgcgcggcg acgagggcct ggtttctcca gcagcgctgg
     7141 ccgcgatgtg gacgccgggc ggcgccgacc cggcgaaggg ctacggcctc ggcttcgccg
     7201 tcgaccacct cgacggccgc cgcaccgtcg gccatggcgg cgtggtctat ggctacgcct
     7261 cgagcatgct gctgctgccc gatgcgggcc tcggcgtcgt catgctctcg accctcgatt
     7321 tcaccaacga actgatcggc cggctggcgc ggcgcgccct ccgcctcgct ctcgccgggc
     7381 gcggcgagag gccgcggcca cgtccggccc gccgcctgcc gccgcccggc gtgacgctcg
     7441 ccgccgaact tgccggcacc taccgcgccg aggacggccg gcttctcgag ctccgagcct
     7501 ccgggctcag gctcaccctc gtcgacgccg gcgtgccgat cgagattcgc ccgatcggac
     7561 agggccggtt cgtgctcgac ggccgcatct tcggtgaaga gaccacccat ccggcgccgc
     7621 tgctcgaggt gctggggacg acgctcggct ggcagggcgc gcgctggcag cgcgtcgacg
     7681 gtccggtcgc cgagcccatt cccgccgagt tcgcggtgca cctcggcacc tacggcccgg
     7741 ccttcatgcc cgtcgacctg caatggtccg gcggcgggct gctctgcctg ctggaatatt
     7801 tcgcgccgca tcgctgcgag ccactgggag atagtcgctt tctcctccat ggcggcctct
     7861 acgaacgcga aatcctggag cttggactcc tcgatgccga gggccgtccg gcgatccgtg
     7921 tcggcgagat gctgctgggg aagcgggtgc cgtgacagca ctcgccgctt cgccgccgac
     7981 gattttctaa acgtttagga ttgactccgg cgcaaaagtt tctgaccctc ccctcgtcgt
     8041 ctcgcggggc atcgcgaggg gcggcacagg aggcgctggc gatggatcag caggcggata
     8101 tcgggcggct cggcctcgcg cggcggccgc acatcctgcc gctccgccag caatcggcgc
     8161 tgatcaccga gatggtccgc ggccggctcg acaccatcct gcctgccgcc atggccgatg
     8221 cggacatcga tgcgtggctg atcctctgcc aggaggacaa ccccgatccg ctgttcctca
     8281 ccatgatccc gttcgacaac tggcacccca tcctgtcggt gctgctgttc gtccgtgatg
     8341 gccaggcgat ccgccgctac aatctgtgcg gcaccgacac caaggacctc tacgaacgcc
     8401 cctacaccgg ccagctcgag gacaagcagt ggccgctgct gctcgacctg ctggcccagc
     8461 acgatccgca gcgcatcggc atcaacatcg gcaccgtggc ctgggcggcg ggcagcctga
     8521 cacacgtcct ctaccaacag ctaaccgaca ggctccccgc caaatatcgc gaccgactgg
     8581 tctcggccga gaaggccgcg gtgcgctggg gcggcaccat gaccgacgcc gaggcggtgc
     8641 tgttcaagcg cgtcaccgag ctcggccagt acatgatcgg cgaatgcttt tcggcgcgca
     8701 ccatcacgcc cggcgtcacc actatcgacg acctcgtctg gcactactac cagcataccc
     8761 gcgacatcgg actggacgtc gcgttccgac cgtacttccg gatacatcgc gatagtcgcg
     8821 acacgcgcta tccggacaac gtcgtggcgc ccggcgacgt gatccattgc gacgtcggca
     8881 tcaagtacat gcgcttcaat tcggatcatc agtacgtggc ctacgtgcca cggcttggtg
     8941 aaaccggacc gtcggcgggc ctcagggcgc ggctcgccga caacaaccgg ctgcaggaca
     9001 tctacatggc cggcttcaca tatggccttt ccggcaacga aatgctgcga aatatgctca
     9061 atcgggcgca cgccgaaggc gtccccaacc ccaagatcta ttcgcacaat ctcggcctgt
     9121 tcctgcacca gcccgggccg ctgatcggcc tgccctggga ccaggatgcg gcgctgccgc
     9181 gcggcgaggt tcgcctcgag tacaacagcg ccttcgtcat ggagctctcg accgaagcgc
     9241 cggtgcccga atggggcggc cagatgctgc ggctgggcac cgaggaaccg gtgatcttca
     9301 cccgcgacgg ctgccgcacg ctctgcggcc gccagacgga gttctgcgtc atctagccgg
     9361 cggaaatctg ggccgccggc cgaacaggga agcgaacgag cgcgacgcgc gggccgacca
     9421 gaaagccagg cgcagcgcac agggagacca acaatgacgt tccattctgt tccaaggcgg
     9481 gcgctgtggc tcgggcttgc cgccgccgcg ctctcgacca ccgcgttgac cgcgccggcc
     9541 ctcgccgaca aggtgctggt gctgccggtc ggcgtcggcg ccgtcggtgc cagcgtggcg
     9601 ctcgacaacc tcgatccgcg cgtcctgctg accaccgcgc accaggccgt gcagatggcg
     9661 atcttcgatt cgctcgtccg ctcgaagggc cccgacatcg tcccggccgc cgccgagaaa
     9721 tgggaaatct ccgccgacgg caagacctac acgttccacc tgcgcgacga gaaatggtcg
     9781 gacggcaagg ccgtgacggc gcaggacttc gtcgacgcct tcgtgcgcat gttcaccacc
     9841 tcgcccgcct cgggcatcta cgacgccatc cagaacggcg ccgcggtgcg tggcaagacc
     9901 gccgatgcct cgacgctcgg cgtcaaggcc gtcgacgaca agacgctggt catcacgctg
     9961 accagcccga cgccgtattt cctcggcctg ctgacctcgg cctactcggc cccgagccgg
    10021 caggacctga tcgacaagga aggcgagaag tacggcacca ccgccgactc gatggcctac
    10081 aacggcccct tcatgctcac cgagtgggag aaccaggaca agctggtcct caagaagaac
    10141 ccgaactact gggacgccaa ggacatcaat ctcgacgagg tggatttcct cgttattccc
    10201 gaccagaaca cgcagcgcaa cctctacgac aacggccagc tcgacgtcta cgcgccggcc
    10261 accgagaccg aggccaagga ctacgaggcc aagggccagc tgctgcgcta caacaagggc
    10321 ggcctgcgcg acatcaccct caaccatctg ggccagggcg atgcgaccaa ggccaagctg
    10381 ttctccgatc ccaacttcat gaagtggatc tccaactcga tcgatcgcca gggcttcgtc
    10441 gacaaggtgc tcgagggcaa cggcatcgct gccaccgtgc agaccccggc cgcgaccagc
    10501 gtctatcccg gcaccacctg gggccaggtc gacatggcca atgtcggcaa gtaccacccg
    10561 ctgaccgccg atccggcgca ggccgacgcc tacaaggcga aggtcctcgc cgacatgggc
    10621 gtcacctccg tcgaccagct gccggccttc aagatgctga ccagcgaaga cccgtccaat
    10681 cccaagctga tgacgcccta cgtgctgagc gtcctgacgc agatgggcct caaggtcacc
    10741 ctcgaccagg agaccggcaa ccagtactgg aacacgcttc tttatccggc gcgcgcctac
    10801 gacatcgcca tcgccggctg gggtcccgac tacgacgatc cgttcaccta catgcagtac
    10861 tggcagacct cgtcgaccga catggggacg accttcaaca acgccgacta cgacaagatg
    10921 ctgcaggacg ccaacaacga gaccgacctc aagaagcgcg ccgacatgct ggtgaaggcc
    10981 gaggcgctgt tctccgacat cggtacctcg atcccgctgc tgcactacaa gggcgaggcg
    11041 gcgatccagc cttatgtgaa gggcatcacc acctcgagct tcggcgtctc gatcaactat
    11101 gtctacgccg acattcagaa gtaagctcga caggcggcgg gaaactcccg gcccgccgcc
    11161 tgttcacgga cgaggttgat ggtcagctat atcttcaggc gtctgctcat cgccctggtc
    11221 gcgatcttcc tcctcgcgac ggtcaccttc ttcctgatgc gcctggtgcc cggcgatccg
    11281 ttcgccgggc cgcgcgtcgc ccccgaaatc cgcaccgcgc tgcgcatcca gtacggcttg
    11341 gacaagccgc tgctgcagca atacctgctc tacatgtgga acctgctgca tggcgacctc
    11401 ggcctgtcgc tggcgagccg cggccacccg gtgaccgaca tcatcgcgca ggcggcgccg
    11461 gtgtcggtcg acctcggcct gcgcgccatg ctcatttcga tcaccctggg cctcgccttc
    11521 ggcatcgttg cggcgctcaa tcgcggcacc ctgctcgact acctgacggt gatcctggtg
    11581 ctgatcggca tctccatgcc gagcttcgtc gtcgccgggc tgctgcaata ttatttcggc
    11641 gtctactggc acgtgctgcc gatcgcccgc tgggagaatt tccagagcac catcatgccg
    11701 gcctttgcgc tgagcctcgg caccatggcc accatcgccc gctacatgcg cgcctcgatg
    11761 ctggagatcg tccacgccga ctacatcaag acggccttcg ccaagggcct gctgccgcac
    11821 caggtggtga tccgccacca ggtgcgcaac gcgctgttcc cgatcctcac catcctcggt
    11881 ccggcggtgg cgcaggtgct gaccggctcc ttcgtggtcg agacggtgtt cgccattccc
    11941 ggcctcgggc gctacttcgt caccgccatg cagaacctcg actacacgct ggtgatgggg
    12001 ctcaccattt tcttcggcgc cttcctcatc gccatgaact tcctcgtcga cgtcgcctac
    12061 ggcctcatcg acccgcgcat ccggacggcc tgagcatggt ggcgatcgat ccctcgctgt
    12121 tcgaacccga ccgcgacgcg catgtcgacg tgctggcagg gcgcccggcg ctcgccttct
    12181 ggagcgacgt ctggcgccgc ttccgccgca acatcccggc catggcgagc ctcgtcctcc
    12241 tcgtcgtctt cgggctgctc gccatcttcg ccccgatcgt cggcggcaag tcgtgggaca
    12301 cgccggacct gttctcgacc tatttgcagc cgagctggca gcactggttc ggcaccgatg
    12361 cgctcggtcg cgacatgtgg ctgtcggtgt gggcgggcgc ccgtgtctcg ctcaccgtcg
    12421 gtctcgtggc cgccctctgc cagatgctga tcggggtgct gatcggcagc ttctcgggtc
    12481 tcgccggtgg ccgcatcgac atggtcatca tgcgcttcgt cgacatcatg atctcgatcc
    12541 cgttcctgat ctgggtgagc ctcttcatgc tggtgctcac ccctggcatc ggctcgatca
    12601 tcatcgcctt tgccctgacg cagtggaccg acatcgcgcg actgacccgg gccgaagtgc
    12661 tgaagctcag gcgcaccgag ttcgtcatcg cctcgagcgc catgggcgcc ggcagctggc
    12721 ggctcatcac ccggcatttc tttcccaaca tcctgccggt gatcatcgtc gcggtgacct
    12781 tccaggtgac caacgccatc ttcggcgaag ccttcctcag ctacatcggg ctcggcatcc
    12841 aggccccgct cacctcgtgg ggcctgctgg tgtcgatggg catcaaggag atgcgcgaca
    12901 atccctacat cctgattttc ccatcgctcg ccatctcgct caccatgctg tcgctgcagc
    12961 tgatcggcga cggcctgcgc gacgccaccg acccgcggct gcgccgatga gcggggcag
//
LOCUS       DATAZA010000073         2891 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_933738, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000073 DATAZA010000000
VERSION     DATAZA010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2891)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2891)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2891
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_933738"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1185)
                     /locus_tag="VHZ56_01835"
     CDS             complement(<1..1185)
                     /locus_tag="VHZ56_01835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEX4296740.1"
                     /translation="MDQAPYDPIESPAAAVPTPAMAQYFELKAANPGYLLFYRMGDFY
                     EMFFEDAEIASRALGIVLTRRGRHQGQDIPLCGVPVHAAQDYLRKLIGLGHRVAICEQ
                     VEDPAEAKKRGGKSPVKRDVVRLITRGTLTEDDLLPARASNYLAALAMLRHGDADFAL
                     AFADVSTGELAVLSLAAAALGDELARLDPAELLFTATTAAALAELKVALPGAATVVLP
                     PEAFESGAAAELIAASFDPAAVDPSAFSRIERAALGALIGYIRESQKGVAVALRPPAA
                     ERLQGHMAIDAATRASLELLATQRGTVAGSLLGEIDRCVTPAGSRLLARRLGAPLCDP
                     AAINDRLDAVDTLLGDTMLCTGLRAALKTVPDLTRAATRLALGRGGPRDLGAVAQAVA
                     GAG"
     gene            complement(1256..2044)
                     /locus_tag="VHZ56_01840"
     CDS             complement(1256..2044)
                     /locus_tag="VHZ56_01840"
                     /inference="COORDINATES: protein motif:HMM:NF013882.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HEX4296741.1"
                     /translation="MLIFYINLDRRPDRREFMAAQLAGLGLAGERIAALTPRELTPEQ
                     LSRFCDPVRGGRLTPVTLSCKLSHIAALEAFLATEARYGLVLEDDAILSPRLPGFLAA
                     LEADPQTIDLLRLETSLRGIRFRRIERRLAGVALVRPLSWEGGAAAYVVSRAAAEQHI
                     RDPRMRRRNDLSLFDPFRGTMLGGLRQTDPGLCIQAHLLEPSMAPQFGSDIGGQAVPT
                     ALSLGQRRRRHLEEFVDREIVYGSRRLWHQLLGAKKHRIPFAAD"
     gene            complement(2109..>2891)
                     /locus_tag="VHZ56_01845"
     CDS             complement(2109..>2891)
                     /locus_tag="VHZ56_01845"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX4296742.1"
                     /translation="NLDRAVPGGVESRGFIRVDLTDYGQTFAALHGHDAVVQLAANGE
                     PDWDHLSGAARFHTNTLIAYNVFQAACFLGLRKVVWASSETVLGFPFDRVLPKLLPTS
                     DDDPPIPTSSYGISKAVTEDLARHMNRRYGVPFIGLRFSNIFYDTPGHVTGYDRIPAF
                     WDDPKSRAFNLWGYVDSRDTAEACALALDSDITGAEVMTIAAPDTIMRQTNAELVAAA
                     FPGCTLRPGTGPHETLDSIARARQLIGYDPQWTWRRVLGRTG"
BASE COUNT          464 a          907 c         1118 g          402 t
ORIGIN      
        1 gccggccccg gcgacggcct gggccacggc gccgaggtcg cggggaccgc cgcggccgag
       61 cgccagccgg gtcgcggcgc gggtgagatc gggcacggtc ttcagtgcgg cgcggaggcc
      121 ggtgcagagc atagtgtcgc cgagcagcgt gtcgaccgca tcgagccggt cgttgatggc
      181 ggccggatcg cagagcgggg cgccgagccg gcgcgccagg agccgcgagc cggccggcgt
      241 gacgcagcgg tcgatctcgc caagcagcga gccggcgacg gtaccgcgct gcgtcgccag
      301 gagctcgagc gaggcgcgcg tcgcggcatc gatcgccatg tgcccctgca gccgttcggc
      361 ggcgggcggc cggagcgcca cggcgacgcc cttctggctc tcgcggatat agccgatgag
      421 ggccccgagc gccgcccgct cgatgcggga aaacgccgag ggatcgacgg cggccggatc
      481 gaagctggcg gcgatgagct cggcggcggc gcccgactcg aaggcttcgg gcggcagcac
      541 gacggtcgcc gcgccgggga gcgcgacctt cagctcggcc agtgccgccg ccgttgtggc
      601 ggtgaacagc agttcggccg gatcgaggcg cgccagctcg tcgccgagcg ccgccgcggc
      661 cagcgacagc accgcgagtt cgccggtcga gacgtcggcg aaggcgagcg cgaaatcggc
      721 gtcgccgtgc cgcagcatgg cgagtgccgc aaggtagttg gaggcccgcg ccggcagcaa
      781 atcgtcctcg gtgagcgtgc cgcgggtaat gaggcgcacc acgtcgcgct tgaccggcga
      841 cttgccgccg cgctttttcg cttcggcggg gtcctcgacc tgctcgcaga tggcgacgcg
      901 gtggccgagc ccgatcagct tcctgaggta atcctgggcg gcgtggaccg gcacgccgca
      961 gagcggaatg tcctggccct ggtggcggcc gcgccgggtg agcacgatgc cgagcgcccg
     1021 cgaggcgatc tcggcgtcct cgaagaacat ctcgtagaaa tcgcccatcc ggtagaacag
     1081 caaatagccc ggattggcgg ccttgagctc gaaatattgc gccatggcgg gcgtcggcac
     1141 agccgcagcc gggctctcga tggggtcgta cggggcctgg tccattcgct cagccgtggc
     1201 gggaagcggc agacattagg gggccgaccg gagaaaagaa agcaggcgag cggggttagt
     1261 ccgcggcgaa cgggatgcgg tgtttcttgg caccaagcag ctggtgccaa aggcgccgcg
     1321 acccatagac gatctcgcga tcgacaaact cctcgaggtg gcggcggcgg cgctggccta
     1381 gagagagagc ggtggggacc gcctgtcccc cgatatcgct gccaaactgc ggcgccatcg
     1441 atggctcgag caggtgcgcc tggatgcaaa ggccagggtc cgtctggcga agaccgccaa
     1501 gcatggtccc ccggaaagga tcgaagagcg aaaggtcgtt tcgccggcgc atgcgcggat
     1561 cacggatgtg ctgttcggcg gcggcgcgcg agaccacgta ggcggcggcg ccgccttccc
     1621 agctcagcgg ccggacgagc gccacgccgg caagccgacg ctcgatccgc cgaaagcgaa
     1681 tgccgcgcag gctggtttcg agacgtaaca gatcgatggt ttggggatcg gcttcgagcg
     1741 cggcaaggaa gccgggcagt ctcggcgaaa gaatggcatc gtcctcgagc accagaccgt
     1801 agcgcgcctc ggtcgccaga aacgcttcca gtgccgcaat gtggctgagc ttgcagctga
     1861 gcgtcaccgg cgtgaggcgg ccaccgcgca ccgggtcgca aaagcgggaa agctgctcgg
     1921 gggtcagctc ccttggcgtc agggcggcaa tccgttcgcc ggcgagaccc agcccggcga
     1981 gttgcgccgc catgaactcg cggcgatccg gccggcggtc gagattgatg tagaagatca
     2041 gcattcggat ccgtcgtggt ccgccgggtg ggcgacgcgg gttcttagca agggtggccc
     2101 gcccgggcct agccggtacg gccgagcacc cgccgccagg tccattgcgg atcgtagccg
     2161 atgagctggc gggccctggc gatggaatcg agggtttcgt gcgggccggt gcccggccgc
     2221 agcgtgcagc cgggaaaggc ggcggcgacg agctcggcat tggtctgccg catgatggtg
     2281 tcgggggcag cgatggtcat cacctcggcg ccggtgatgt cgctgtcgag cgccagcgcg
     2341 caggcctcgg cggtgtcgcg gctgtcgaca tagccccaga ggttgaaggc gcgcgatttc
     2401 ggatcgtccc agaaggcggg gatcctgtcg tagccggtca cgtggccggg cgtgtcgtag
     2461 aagatgttgg agaagcggag cccgatgaag ggcacgccgt agcgccggtt catgtggcgg
     2521 gccaggtcct cggtgaccgc cttggagatg ccgtaggacg aggtggggat cggcgggtcg
     2581 tcatcgctgg tcggcaggag ttttggcagc acgcggtcga aggggaagcc gagcacggtc
     2641 tcggacgacg cccagacgac cttgcgcagg ccgagaaagc aggcggcctg gaagacgttg
     2701 taggcgatca gcgtattggt gtggaagcgc gccgcgcccg acagatggtc ccagtcgggc
     2761 tcgccattgg cggccagctg caccacggca tcgtggccgt gcagcgccgc gaaggtctgg
     2821 ccgtaatcgg tgaggtcgac gcggatgaag ccgcggctct cgacgccgcc gggcacggcg
     2881 cgatcgaggt t
//
LOCUS       DATAZA010000074         2710 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_121221, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000074 DATAZA010000000
VERSION     DATAZA010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2710
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121221"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..375)
                     /locus_tag="VHZ56_01850"
     CDS             complement(<1..375)
                     /locus_tag="VHZ56_01850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018855622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4296743.1"
                     /translation="MTDPSGVGLWGVPLAILGGAIRVSTPFIFVSLGETITERSGRIN
                     LGLEGTLVFGAMIGYATAVITGSPWIGVLAAAFSGICFGLFHGWICKFPKVNDIAIGI
                     AMMQFGTGIAFFFGKPFIQPVAP"
     gene            complement(372..1502)
                     /locus_tag="VHZ56_01855"
     CDS             complement(372..1502)
                     /locus_tag="VHZ56_01855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006203437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4296744.1"
                     /translation="MTDTTPDALKETASIPVPAYGAFVEQLARKSEAIVIPVGAIIVG
                     LAIFSVFLLFLGKSPVDFLSLMVKGGFGSSFSIQNSLTRASPLLLTALCVALPARLGL
                     VIIGGEGAVVLGGVAAAAVGVPLLGLPYVVVIGAMALAGLVAGGVWIGIVGALRHYRG
                     VNETIASLLMAYIAIALMNHFVEGPLRDPASLNKPSTYPIGDAYMIGNIPGMDVHWGL
                     VVGIVACIGSWVLIEKTTWGFAARISGGNLRAAQIQGLAVGRLIVGFTALAGAFAGLA
                     GMIEVAAVQGNANASLAAGYGYTGILVAFLARQNPLAIIPVAFLLGGIDASGGLLQRR
                     MDLPDATVLVLEGMLFIAILFSDTLYGRFKLFNPDLWLRNRQ"
     gene            complement(1577..2707)
                     /locus_tag="VHZ56_01860"
     CDS             complement(1577..2707)
                     /locus_tag="VHZ56_01860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008877633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX4296745.1"
                     /translation="MTGKFMLSRRQLLKSTAAGAALGLGAGLLPRAAFADTPLTVGFI
                     YVGPKDDYGYNQSHHLAALEVAKIPGITIVEEENVPETTDVVKTMESMINLDGASLVF
                     PTSFGYFDPFMLDTAKKYPDVQFRHCGGLWTDKDPPNTGSYFGYIGLGQYLNGIVAGH
                     MTKSKKLGFVAAKPIPQVLENINSFLLGARTVDPTITVQTIFTGEWSLAVKEAEATNA
                     LADQGIDVVTMHVDSPKVVVQTAAGRGLYVCGYHANQSALAPDKYLTGAEWNWTKPYT
                     DFINAAIAGQPLGQFVRGGIPEGFVKMSPLGPAVTPEAKAQFDATLADINAAKGDYAV
                     IKGPLKDNTGKEVVPAGKVYPETAIELESMDYLLDGVIGSTS"
BASE COUNT          493 a          826 c          944 g          447 t
ORIGIN      
        1 cggcgccacc ggctggatga agggcttgcc gaagaaaaag gcgatgccgg tgccgaactg
       61 catcatggcg atgccgatgg cgatgtcgtt gaccttgggg aacttgcaga tccagccgtg
      121 gaacaggccg aagcagatgc ccgaaaacgc ggccgcgagg acgcctatcc agggcgagcc
      181 ggtgatgacc gcggtggcgt agccgatcat cgccccgaac acgagggtgc cctcgaggcc
      241 gagattgatg cgccccgacc gctcggtgat cgtctcgccc agcgacacga agatgaacgg
      301 cgtcgagacg cggatggcgc cgccgaggat ggcgaggggg acgccccaga gaccgacgcc
      361 cgatgggtct gtcattgccg gttcctcaac cagagatcgg gattgaatag cttgaagcgg
      421 ccgtagagcg tgtccgagaa caggatggcg atgaacagca tcccctcgag caccagcacg
      481 gtcgcatccg gcaggtccat gcggcgctgc agcaggccgc ctgaggcgtc gatgccgccg
      541 agcaggaacg ccactggaat gatggcgagt ggattttgcc gggcgaggaa cgcgaccaga
      601 atgccggtat agccgtagcc ggcggcaagc gaggcgttgg cgttgccctg caccgccgcc
      661 acttcgatca tgcccgcaag gcccgcgaag gcgcccgcga gcgcggtaaa gccaacgatc
      721 agccttccca cggcgaggcc ctggatctgg gcagcgcgca ggttgccgcc ggagatgcgc
      781 gcggcaaagc cccaagtggt cttttcgatc agcacccagc tgccgatgca cgctacgatg
      841 ccgaccacaa gtccccagtg tacgtccatg ccggggatgt tgccgatcat gtaggcgtcg
      901 ccgatggggt aggtcgacgg cttgttgagg ctcgccggat cgcgcagcgg accctcgacg
      961 aaatggttca tcagcgcgat ggcgatatag gccatcagca gcgaggcgat ggtctcgttg
     1021 acgccgcgat agtggcgcag cgcgccgacg atgccgatcc agacgccgcc cgcgaccaat
     1081 ccggcgagcg ccatggcccc gatcaccacg acatagggca gtccgagaag cggcaccccg
     1141 accgccgcgg cagcgacgcc gccgagcacc acggcgcctt cgccgccgat gatcaccagc
     1201 ccaagccggg ccggcagcgc gacgcacagt gccgtcagca gcaatggcga ggcgcgtgtc
     1261 agggagttct ggatagaaaa gctcgagccg aacccgccct tgaccatcag cgaaaggaaa
     1321 tcgacgggtg acttgcccag gaacagcagg aagacggaga agatcgcgag cccgacgatg
     1381 atcgcgccga ctggaatgac gatcgcttcg gatttgcgcg ccagctgttc gacgaacgcg
     1441 ccataggcgg gcaccgggat gctcgccgtt tccttcaggg cgtcaggtgt ggtgtccgtc
     1501 atgttcccgc tccatggccg cttggcacga atgggcgcgg cggcggtcgc cgtcgcgccg
     1561 gatcgtcagc tcggtgtcac gacgtcgagc cgatgacgcc gtcgagcagg taatccatgc
     1621 tctcgagctc gatggcggtc tccggataga ccttgccggc cggcacgact tccttgccgg
     1681 tgttgtcctt gaggggcccc ttgatgacgg cgtagtcgcc cttggccgcg ttgatgtcgg
     1741 caagcgtcgc gtcgaactgc gccttggcct cgggagtcac ggccggcccg agcgggctca
     1801 tcttgacgaa gccttcgggg atgccgccgc gcacgaactg gccgagcggc tggccggcga
     1861 tcgcggcatt gatgaagtcg gtatagggct tggtccagtt ccactccgcg ccggtgaggt
     1921 atttgtcggg cgccagcgct gactggttgg cgtggtaacc gcagacatag aggccgcggc
     1981 cggccgcggt ctggacgacg accttgggac tgtcgacgtg catggtcacg acgtcgatgc
     2041 cctggtcggc gagcgcgttg gtcgcctcgg cttccttgac cgcgaggctc cactcgccgg
     2101 tgaagatggt ctgcaccgtg atggtcggat cgaccgtccg ggcgccgagc aggaacgagt
     2161 tgatgttctc gagcacctgc gggatcggct tggcggcgac gaaacccagc ttcttggatt
     2221 tggtcatgtg gccggcgacg atgccgttga gatattggcc gaggccgata tagccgaaat
     2281 atgagccggt gttgggtggg tccttgtcgg tccacaggcc gccgcaatgc cggaactgca
     2341 cgtccgggta tttcttggcg gtatcgagca tgaaggggtc gaaatagccg aacgaggtcg
     2401 ggaagaccag cgaggcgcca tcgaggttga tcatggattc catggtcttg acgacatcgg
     2461 tggtctcggg gacgttctct tcctcgacga tggtgatgcc cgggatcttg gcgacttcca
     2521 gcgccgccag atggtgcgac tggttatagc cgtaatcgtc cttgggaccg acatagatga
     2581 agccgaccgt cagcggcgtg tcggcgaagg cggcgcgggg caacagtccg gcaccgagcc
     2641 cgagcgcggc gcctgccgct gtggatttga ggagctgcct gcgcgacagc atgaacttgc
     2701 cggtcatcga
//
LOCUS       DATAZA010000075         5933 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3486753, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000075 DATAZA010000000
VERSION     DATAZA010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5933
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3486753"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            93..659
                     /locus_tag="VHZ56_01865"
     CDS             93..659
                     /locus_tag="VHZ56_01865"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX4296746.1"
                     /translation="MDKDSRSKMIESAAGLIGSRGLNAASFSEVLAVSGAPRGSIYHH
                     FPEGKDQLAAEAVRWTSARVLAFQAAYAGTTPEGVLDRFVGMWRHTVEVSHGEAGCVV
                     AGVAIDTVSSVPGLIELVRETFREWVALLARQLEATGVAPERAGAIATMAVAAMEGAL
                     ILCRAEGGTAPLERVAAELKRLLPAAAE"
     gene            720..1235
                     /locus_tag="VHZ56_01870"
     CDS             720..1235
                     /locus_tag="VHZ56_01870"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4296747.1"
                     /translation="MTTFHPGRLMGAVACGLLLTLAAPAFAIDTGGNDTGSGGAMTQT
                     VAPKPAPKPMAKVPTLAQARADIAASNWPKAIADLKLIVAASPKSADAWNLLGFSYRS
                     AGMLTSADKAYDIALKLNPKHTGALEYQGILYIKLGKTDEARANLAKIKTICGNTTCE
                     EYVDLAKALGM"
     gene            complement(1242..2066)
                     /locus_tag="VHZ56_01875"
     CDS             complement(1242..2066)
                     /locus_tag="VHZ56_01875"
                     /inference="COORDINATES: protein motif:HMM:NF018649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1295 domain-containing protein"
                     /protein_id="HEX4296748.1"
                     /translation="MPEMIAGHLPWGALGLALVLCLAVSALGFLRTDWFISIGYGFSV
                     AAQAALYALLYRGALSPVLVLQLLLYLAYGLRLGGYLVARERAASFAGELGASKARSA
                     GLAGPLKPVIWVAVSALYVAMVSPLLSGLAMPAGAASPTLLPGIAVMALGLLLEAAAD
                     AQKARLKKRAPGDFARTGLYAIVRCPNYLGEMLFWFGGFVAALGSYASLAAVLLALAG
                     LVCIELIMLGAARRLESKQAGRYGSDPTYQSYVRHVPILFPLVPLYSLRTLRVYLG"
     gene            2213..3445
                     /locus_tag="VHZ56_01880"
     CDS             2213..3445
                     /locus_tag="VHZ56_01880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4296749.1"
                     /translation="MSDTDLVPPRLIRHRSFLLFLGSRVPSSMAFQGAGVAIGWLVYD
                     KTGSPFDLGLIGLCQFLPMVVLTFVVGHVADAFDRRRIALACQVVEALTMAVIAVGVW
                     QGWLGLGPIFLAVAVLGAAQAFERPTMAALLPSILPPALLPAGIANSTSAMQAALVVG
                     PALAGLLYGVAPVVPFIVSAVLFVVASCSVTAIPRLGAPQKREPVTLKSVFAGAAFIR
                     SRPVMLGTISLDLFAVLLGGATALLPAFARDILHAGPLGLGFLRTAPAIGAIGMSLWL
                     GRFPLKRHVGRAMLWAVAVFGAATIGFAFSSNVALSVLLLLVLGAADTISVVVRTSLV
                     QLLTPDQMRGRVNAINSLFIGTSNQLGEFESGLVASVVGPVWAVALGGLGTIAVVLLW
                     TRLFPALPKVQRFGEDPG"
     gene            3790..4479
                     /locus_tag="VHZ56_01885"
     CDS             3790..4479
                     /locus_tag="VHZ56_01885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296750.1"
                     /translation="MTKLTASLLALGLVASAAPAFAADLPQVPDKPAAPPAASTTIGL
                     EGSPEFFADPTNVRYGQVNDVYLKGTITENVGNGFSIGTSLQGVDKISNSPATYQYLA
                     DVFAAYKAKVSDAVSLTFTGGLGFSFGNTGYAGGVAVGTGTDPFLYYYGQAALDYKID
                     SNWTWNVVNVRLRDAFSVAWYTPKIQSGITYNIDASNAIYANAGYAWKDSGSGLKPDK
                     FNIAVGYKYSF"
     gene            complement(4532..>5933)
                     /locus_tag="VHZ56_01890"
     CDS             complement(4532..>5933)
                     /locus_tag="VHZ56_01890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HEX4296751.1"
                     /translation="IKEAGERVRAALVASGLGLPPKRITINLAPADLPKEGSHYDLPI
                     ALALMAAIGAFPADALDGYLALGELGLDGRLAPTNGVLPAAIAAHARDLGIVCPAPSG
                     PEAAWAGDDIEIVAPESLLALVNHLGGYQLCARPLPRRREAVGGLPDLSEVRGQQVAR
                     RALEIAAAGGHNLLLVGPPGAGKSMLAQRLPSILPPLNPRELLDVSMIASIAGELAEG
                     ALSDRRPFRAPHHSASMAALVGGGLKVRPGEVSMAHNGVLFLDELPEFAPSVLDSLRQ
                     PLESGETVIARANARVTFPARFQLVAAMNPCKCGLAGTPGHTCKRGDACAADYQARLS
                     GPFLDRIDIRVDVPAVGAAEMIGPATGEPSAAVAARVRVAREVQRERFLRAGHPEIFT
                     NAAASVSLVEALVDPDRDSQALLLEAAGRFSLSARAYHRVLKVARTLADLAGSARVTR
                     PHVAEALSYRINLGAA"
BASE COUNT          922 a         2044 c         2107 g          860 t
ORIGIN      
        1 cgatcatcgg catgggcttc tcctgtggtc tatgacggtc gtcataacct gcggaacgtg
       61 ccatatgatg gtcgtcatag tcaagggacg cgatggacaa ggacagccgc agcaagatga
      121 tcgagagcgc cgccggcctc atcggctcgc gcggcctgaa cgcagcgtcg ttttccgagg
      181 tgctggcggt ttcgggggcg ccgcgcggct cgatctatca ccatttcccc gagggcaagg
      241 accagctggc ggccgaggcg gtgcgctgga ccagcgcgcg ggtgctggcc ttccaggcgg
      301 cctatgccgg caccacgccc gaaggcgtgc tcgaccgttt cgtcggcatg tggcgacaca
      361 cggtcgaggt gtcgcacggc gaggccggat gcgtggtggc gggggtcgcc atcgacacgg
      421 tgtccagcgt gccggggctg atcgagctcg tgcgcgagac cttccgcgag tgggtggcgc
      481 tgctggcgcg gcagctcgaa gcgacgggcg tcgcgccgga gcgggccggg gcgatcgcca
      541 ccatggcagt cgccgccatg gagggggcgc tgatcctctg ccgggccgag ggcggcaccg
      601 cgccgctcga gcgtgtcgcc gccgagctca agcggctgtt accggcggcg gcggaataag
      661 ctggtcgggc cgctgttgtc agcagcaggc cggacggttc cggccgatgg gagacgatca
      721 tgacgacatt ccaccccggc cgcctgatgg gcgctgtggc ctgcggcctg ctgctgacgc
      781 tggcagcgcc ggccttcgcc atcgataccg gcggcaacga caccggttcg ggcggcgcga
      841 tgacccagac ggtggcgccc aagcccgccc ccaagccgat ggcgaaggta ccgaccctgg
      901 cgcaggcgcg ggccgacatc gcggccagca actggccgaa agccatcgcc gacctcaagc
      961 tgatcgtcgc ggcctcgccg aagagcgccg atgcctggaa cctgctgggc ttttcctacc
     1021 gcagcgccgg catgctgacc tcggccgaca aggcctacga catcgcgctg aagctcaacc
     1081 ccaagcacac cggggcgctc gaataccagg gcatcctcta catcaagctc ggcaagaccg
     1141 acgaggccag ggccaacctc gccaagatca agaccatctg cggcaacacc acctgcgagg
     1201 aatatgtcga tctcgccaag gcgctgggca tgtagggccg gctagccgag atagaccctg
     1261 agggtgcgca gcgaatagag cggcaccagc gggaacagga tcggcacatg ccgcacatag
     1321 gattggtagg tcgggtcgct gccgtagcgc ccggcctgct tgctttcgag acggcgggcc
     1381 gcgccgagca tgatgagttc gatgcagacg aggccggcaa gggccagcag cacggcggcg
     1441 agactcgcat aggaccccag cgcggcgacg aagccgccga accagaacag catttccccc
     1501 agatagttgg gacagcgcac gatggcgtag agtccggtgc gggcgaagtc gccgggtgcg
     1561 cgcttcttca gccgcgcttt ctgggcgtcg gcggcggcct cgagcagcag ccccagcgcc
     1621 atgacggcga tgccgggcag cagcgtcggc gaggccgcgc cggcaggcat ggcgagcccc
     1681 gacagcagcg gcgagaccat cgcgacatag agggccgaga ccgcgaccca gatgaccggc
     1741 ttcagcgggc cggcaagacc ggcgctgcgc gccttcgagg cgccaagctc gccggcgaac
     1801 gaggcggccc gctcgcgggc cacgagatag ccgccgagcc tcaggccgta cgccagatag
     1861 agcagcagct gcaggacgag gaccggcgag agggcacccc gatagagcag cgcatagagc
     1921 gccgcctgcg ccgcgacgga gaaaccgtag ccgatgctga tgaaccagtc ggtgcggagg
     1981 aagcccagcg ccgacacggc aaggcagagc accaaggcga ggccgagggc accccagggc
     2041 agatggccgg caatcatctc aggcatggca gctccctcgc atggcgtgaa cgaccgggcc
     2101 agcgcggcgg atcacttctc ccgctcgtct gcgggggtgg cggcgcggcg cggccgggcg
     2161 tatgacagcc gcctccccca tcgcggcccc tcgccgccct tttccccctc gcatgtccga
     2221 caccgacctc gtcccgccgc gcctgatccg gcatcgctcc ttcctgctgt tcctcggctc
     2281 gcgcgtgccc tcgtcgatgg cgttccaggg cgccggcgtc gcgatcggct ggctggtcta
     2341 cgacaagacc ggcagcccgt tcgacctggg gctgatcggg ctctgccagt tcctgccgat
     2401 ggtggtgctg accttcgtcg tcggccacgt cgccgacgcc ttcgaccggc ggcgcatcgc
     2461 gctcgcctgc caggtggtcg aggcgctgac catggcggtg atcgcggtcg gcgtctggca
     2521 gggctggctc gggctgggcc cgatcttcct ggccgtcgcg gtgctcggcg cggcgcaggc
     2581 cttcgagcgc ccgacgatgg cggcgctctt gcccagcatc ctgccgccgg cgctgctgcc
     2641 ggcgggcatc gccaattcga cctcggcgat gcaggcggcg ctggtggtcg gcccggcgct
     2701 cgccggcctg ctctatggcg tcgcgccggt ggtgccgttc atcgtatcgg ccgtcctgtt
     2761 cgtcgtcgcc agttgcagcg tcaccgccat tccccgcctg ggcgcgccgc agaagcgcga
     2821 gccggtgacg ctcaaatcgg tgttcgccgg ggccgccttc atccgctcgc ggccggtgat
     2881 gctgggcacc atctcgctcg acctgttcgc ggtgctgctg ggcggcgcca cggcgctgct
     2941 gccggccttc gcccgcgaca tcctccatgc cggaccgctg ggcctcggct tcctgcgcac
     3001 cgccccggcc atcggggcga tcggcatgtc gctgtggctc ggccggtttc cgctgaaacg
     3061 ccatgtcggg cgggcgatgc tgtgggcggt cgcggtattc ggggcggcga ccatcggctt
     3121 tgcgttctcc agcaatgtgg cgctgtcggt gctgctgctg ctggtgctgg gcgcggccga
     3181 cacgatcagc gtcgtggtgc gcacctcgct ggtgcagctg ttgacgccgg accagatgcg
     3241 cggccgggtc aacgccatca actcgctgtt catcggcacc tccaaccagc tgggcgagtt
     3301 cgaatccggc ctcgtcgcca gcgtcgtcgg gccggtgtgg gcagtggcgc tgggcgggct
     3361 cggcaccatc gccgtggtgc tgctgtggac gcggctgttc ccggcgctgc cgaaagtgca
     3421 aaggttcggc gaggacccgg gctgacgggc cggagcacag gcgtgcgcct gccggcgttg
     3481 cggcgcacgg aattttcccc cgcgaaagca ataccgcgaa tgccgcgcct tgcgatagtc
     3541 gactaagtcg atagatttac tgtggtgagg caggcgggcc ggccccgggg cgcgacgtca
     3601 tatgacattt gtgttgcaga tcaaagacgt agcgccagca caacagggcg gctgtcacgt
     3661 cctgtcacat tcggaatcag cgtttccgga ccggtcgccg cgtgccattt caccgccgct
     3721 gtcccgcaag ggcagacgga aacgaccgat cggcctcaca cgatcgatcc aggggcaagg
     3781 accacacaga tgaccaaact caccgcttcg ctgctggctc tggggctcgt cgcctcggcc
     3841 gcgccggctt tcgccgccga cctgccgcag gtgcccgaca agccggccgc gccgccggcc
     3901 gccagcacca ccatcggcct cgagggcagc ccggaattct tcgccgaccc gaccaacgtc
     3961 aggtatggcc aggtcaacga cgtctacctc aagggcacca tcaccgaaaa tgtcggcaat
     4021 ggcttttcga tcggcacgtc gctgcagggc gtcgacaaga tctcgaacag cccggcgacc
     4081 taccagtacc tcgccgacgt gttcgccgcc tacaaggcca aggtgagcga cgccgtctcg
     4141 ctgaccttca ccggcggcct cggcttcagc ttcggcaaca ccggctatgc cggcggcgtt
     4201 gcggtgggca ccggcaccga cccgttcctc tactattacg gacaggccgc gctcgactac
     4261 aagatcgact cgaactggac ctggaacgtc gtcaacgtca ggctgcgcga tgctttcagc
     4321 gtcgcctggt acaccccgaa gatccagagc ggcatcacct acaacatcga tgccagcaac
     4381 gcgatctacg ccaacgccgg ctacgcctgg aaggacagcg gctcggggct caagccggac
     4441 aagttcaaca ttgccgtcgg ctacaaatat tcgttctgag caaacgatcc gatgcagaga
     4501 tggcggctcc cggcgagccg ccgtcgacgt gtcaggcagc acctagattg atccggtagc
     4561 tcagcgcttc ggcgacgtgc gggcgcgtca cccgggcgga gccggcaagg tcggccaggg
     4621 ttcgcgccac cttcagcacg cgatggtagg cacgggcgct cagcgaaaac cggccggcgg
     4681 cctcgagcag cagcgcctgg ctgtcgcgat cgggatcgac cagcgcctcg accagcgaca
     4741 ccgatgccgc ggcattggta aagatctcgg gatggccggc gcgcaggaag cgctcgcgct
     4801 gcacctcgcg cgccacccgg acgcgcgccg caacggcggc cgagggctcg ccggtcgccg
     4861 ggccgatcat ctcggcagct cccacggcgg gcacgtcgac gcggatgtcg atgcgatcga
     4921 ggaacgggcc ggagaggcgc gcctggtagt cggcggcaca ggcgtcgccg cgcttgcagg
     4981 tgtggccggg ggtaccggcg aggccgcact tgcaggggtt catggcggcg accagctgga
     5041 accgcgccgg gaaggtgacg cgggcattgg cgcgggcgat caccgtctcg ccgctctcca
     5101 gcggctggcg caggctgtcg agcaccgagg gcgcgaactc cggcagctcg tcgaggaata
     5161 gaacgccgtt atgggccatg ctgacctcgc ccggccgcac cttgaggccg ccgccgacca
     5221 gcgccgccat cgaggcggaa tggtgcgggg cgcggaacgg ccggcggtcg ctgagggcgc
     5281 cttcggccag ctcgccggcg atcgaggcga tcatcgagac gtcgagcagc tcgcgcggat
     5341 tgagcggcgg caggatggag ggcaggcgct gcgccagcat cgacttgccg gcgccgggcg
     5401 gcccgaccag caggagattg tgaccaccgg cggcggcgat ctcgagggcc cggcgcgcca
     5461 cctgctggcc gcgcacctcg ctcagatcgg gcaggccgcc aacggcctcg cggcggcgcg
     5521 gcagcggccg ggcgcagagc tggtagccgc ccagatggtt gaccagcgcc aggaggctct
     5581 cgggcgcgac gatctcgatg tcgtcgccgg cccatgccgc ctctggcccc gatggcgccg
     5641 ggcagacgat gccgaggtcg cgggcgtgcg cggcgatggc ggccggcagc acgccattgg
     5701 tcggcgccag ccggccgtcg agcccgagct cgcccagcgc caaatagccg tcgagcgcgt
     5761 cggcggggaa ggcgccgatc gccgccatca gggccagcgc gatcggcagg tcgtagtgac
     5821 tgccctcctt gggcaggtcg gccggcgcca ggttgatggt gatgcgcttg ggcggcaggc
     5881 cgagcccgga ggcgacgagc gcggcgcgca cccgctcgcc ggcttccttg atc
//
LOCUS       DATAZA010000076         4631 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1282080, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000076 DATAZA010000000
VERSION     DATAZA010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4631
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1282080"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..193
                     /locus_tag="VHZ56_01895"
     CDS             <1..193
                     /locus_tag="VHZ56_01895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="type II and III secretion system protein family
                     protein"
                     /protein_id="HEX4296752.1"
                     /translation="VQPNTPAQVAATPLDQTVPANDAEFFALGQLEVTPTMLKGFQTG
                     AGAAGPYGDIIDLGPGGGK"
     gene            190..453
                     /locus_tag="VHZ56_01900"
     CDS             190..453
                     /locus_tag="VHZ56_01900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296753.1"
                     /translation="MSGRLSPALALKAAAIAAGLALLLAGCSYDYLQHTDRVGYSAGD
                     AVKANLAMETTNPSKRSMYATGGLGGNGDVSSIPPASSAAAAN"
     gene            complement(521..1024)
                     /locus_tag="VHZ56_01905"
     CDS             complement(521..1024)
                     /locus_tag="VHZ56_01905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296754.1"
                     /translation="MGRGLVAIALAALPLAACSSLVNGPGASSFGSNQLQPAQIANIG
                     DYTADRALSEAQAHFRNNDFGYSATLYQRVVDLSPKDPGGYVGLGASYDRLGRFDLSD
                     RVYATLYQLQGGTAQYYNNVGYSDLLRGNLTAALTNFRKARALDPNNVVVANNLQIIA
                     NIASSRA"
     gene            complement(1388..1463)
                     /locus_tag="VHZ56_01910"
     tRNA            complement(1388..1463)
                     /locus_tag="VHZ56_01910"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1428..1430),aa:Thr,seq:cgt)
     gene            complement(1496..2866)
                     /locus_tag="VHZ56_01915"
     CDS             complement(1496..2866)
                     /locus_tag="VHZ56_01915"
                     /inference="COORDINATES: protein motif:HMM:NF018875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis HemY N-terminal
                     domain-containing protein"
                     /protein_id="HEX4296755.1"
                     /translation="MIRLATWIVISLLLTALIAWLISLPGTAMIEIAGYRMQPRLGMA
                     AFLAAAALAAVIVLWSILRRILDAPRYFSKLGRDRRRDLGVAALSDGFVALQAGDPNR
                     ARVLAREARSNLPRNHAAQLLEARSDLALGDMQSAREHYRALISNKKTAVAALAGLYE
                     QARTQGRTDAALSFAQKAVALAPQTRWASDAVLDDLTRRGQWENALARIGDETATTRE
                     EKMVRRRKQAVLETALARETAETDSALALDHALVALKLVPEFVPAALIAARIQSNRGE
                     VRRAMSLLRRTWRATSHPHLATLYANAQQGASAVERLKRVRELIDSPPPNRPAAIVLA
                     RAAVDAYDWPAARNALASYSTAEPTQAVCLLMAEIEEGQNADQGKAREWLARAVRAPR
                     DPVWTADGITADEWEPISPLTGALDAFEWRVPLSTVASRSEPPAAESLPAPPPETSLA
                     PQPGAQ"
     gene            complement(2863..4092)
                     /locus_tag="VHZ56_01920"
     CDS             complement(2863..4092)
                     /locus_tag="VHZ56_01920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296756.1"
                     /translation="MADRATGPLKPPVIDLTARAAGRSEGEPRPAPESPPGLNRRDAS
                     PRTPESAGRASWPLLAGVAVAGAVLGTVLTYLVAIALPLPTHQPALPDLTPRLEAQDA
                     RLGTIEQGLGDLKASTTRTQVSLDATITTLDGDMTAVNKSIADVKAAMPAAAPAVDLS
                     PLETQLATLKSEVDAVSAGASGTDAGAIAQHIATLETTLGSVTSRIDGLDANAASLRT
                     DLDAARKALTDHIASALPSEVGPAMKLPLLLAGLQSAFDGGKPFTAELAGLKTIVPDL
                     AVPAALDAAAATGLSRPDVLLQRFETALPDILAARDTTGSDWGTDALDWAKSLLALRP
                     AEEQPGDSPEAIVSRLEGAMGRNDYAAAMSLLAQLPPKMQQAATPVAGDIAAHAAADQ
                     LVTDLRAKALAAAGTAP"
     gene            complement(4116..>4631)
                     /locus_tag="VHZ56_01925"
     CDS             complement(4116..>4631)
                     /locus_tag="VHZ56_01925"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEX4296757.1"
                     /translation="FRSLPLYAVGDRTAALARRFGFAEVSSAEGSLFDLVALLARAGI
                     AGPVFYPAAREQAADLAKALAPHGIMVITAPVYAMRAATRLTDATRARLEAGALAAAL
                     FYSRRTAEAFVDLASGLRDKARLGMLCLSEAVAEPLVAAHFVRVGLADHPSEEAMMGL
                     ALSFARAQNPA"
BASE COUNT          653 a         1482 c         1837 g          659 t
ORIGIN      
        1 ggtgcaaccc aacacgccgg cgcaggtggc cgcgacgccg ctcgaccaga cggtgccggc
       61 caacgacgcc gagttcttcg cgctcgggca gctggaagtg acgccgacca tgctcaaggg
      121 cttccagacc ggagccgggg cggccgggcc ctacggcgac atcatcgacc tcgggccggg
      181 gggcggcaaa tgagcgggcg gctgtcgccg gcgctggccc tgaaggcggc ggcgatcgct
      241 gccgggctgg cgctgctgct tgccggctgc tcctacgact acctgcagca caccgatcgc
      301 gtcggctaca gcgcgggcga tgcggtgaag gccaatctgg cgatggagac gaccaatcca
      361 tcgaagcggt cgatgtacgc caccggcggg ctcggcggga atggcgacgt gagttcgatc
      421 ccgcccgcgt cgtccgccgc cgctgccaac tagcggcgga cgttcgtcgc agtcttgcat
      481 caactccagc gacgacacgg gtgaccgccg aagccggccg tcaggcccgc gaggatgcga
      541 tattggcgat gatctgcaga ttgttggcga cgacgacgtt gttcgggtcg agcgccctgg
      601 ccttgcggaa attggtcagc gccgcggtga gattgccgcg cagcaggtcg gaatagccga
      661 cattgttgta gtattgcgcg gtgccgccct gcagctggta gagcgtcgca tagacgcggt
      721 cggaaaggtc gaagcggccg agccggtcgt acgacgcccc gagcccgaca tagccgccgg
      781 ggtccttggg gctgaggtcg acgacgcgct ggtagagcgt cgccgaataa ccgaaatcat
      841 tgttgcggaa atgggcctgc gcctccgaca aagcacggtc ggcggtgtag tcgccgatat
      901 tggcgatctg ggccggctgc agctggttgc tgccaaaact gctggcgccg gggccgttca
      961 ccaggctgct gcaggcggcc agcggcagcg ccgccagcgc gatggcgaca agcccacggc
     1021 ccaaggcccc gatcgtgcgg ttccgcatgt tgcccccacg gcatccccgc gcgccacgcg
     1081 cggtcgtcat ccgtccagag cctaggcggc tgccgggtga cggatggtta acgttgcggg
     1141 agttctgcgt ttcaggctta acgcggagtt acgaccgtca ggccggcagg ccgggccgct
     1201 ctgcgccgtt gacgaagcgc ttcgccctgt cggggagcat ttccgacctc gaagacgacc
     1261 cgcgaattga aatcgtgttc tatcgcaagc cctccctgcg cgcggatcgt tgcgatcagc
     1321 tgacggctcg cacccggccg tccggaccga agggcaacgc agcggcgtca cgccaggagc
     1381 aggaaaatgg tgccgcttag gtgactcgaa cacctgaccc catcattacg aatgatgtgc
     1441 tctaccaact gagctaaagc ggcctgcttg cggcggtgcc ggaagccggg ctcttttact
     1501 gagcgcccgg ttggggcgca agcgaagttt cgggcggcgg ggccgggagg ctctcggcgg
     1561 cagggggctc gctgcggctg gcgacggtgc tgagcgggac gcgccactcg aaggcgtcga
     1621 gcgcgccggt gaggggggag atcggctccc actcgtcggc ggtgatgccg tcggcggtcc
     1681 acaccgggtc gcggggggcc cgcacggcgc gggccagcca ctcgcgggcc ttgccctggt
     1741 cggcgttctg gccctcctcg atctcggcca tcagcaggca caccgcctgg gtcggctcgg
     1801 cggtcgaata gctggcgagg gcgttgcggg cggccggcca gtcataggca tcgacggcgg
     1861 cgcgggccag cacgatggcg gccggtcggt tggggggcgg gctgtcgatc agctcgcgga
     1921 cgcgcttcag ccgctcgacg gcggaggcgc cctgctgggc gttggcatag agcgtcgcca
     1981 ggtgcggatg cgacgtggcg cgccaggtgc ggcgcagcag gctcatggcg cggcgcacct
     2041 cgccgcggtt ggactggatg cgggcggcga tcagcgccgc cggcacgaat tcgggcacca
     2101 gcttcagcgc caccagcgca tgatcgaggg cgagggcgga gtcggtctcg gcggtctcgc
     2161 gggcgagcgc cgtctcgagc accgcctgct tgcggcgcct gaccattttt tcctcgcgcg
     2221 tcgtggcggt ctcgtcgccg atgcgcgcga gggcgttctc ccactggccg cgtcgggtca
     2281 aatcgtcgag cacggcgtcg gaggcccagc gggtctgcgg cgccagcgcc acggccttct
     2341 gggcaaagct cagcgcggcg tcggtgcgcc cctgggtgcg ggcctgctcg tagaggccag
     2401 cgagcgcggc gaccgcggtc ttcttgttgg agatcagcgc ccggtagtgc tcgcgggccg
     2461 actgcatgtc gccgagcgcc aggtcggaac gggcttccag aagctgcgcg gcgtggttgc
     2521 ggggcaggtt ggagcgggcc tcgcgggcga gcacgcgggc ccggttggga tcgcccgcct
     2581 gcagggcgac gaagccgtcg gagagggcgg cgacgccaag gtcgcggcgg cggtcgcggc
     2641 cgagcttcga gaaatagcgc ggcgcgtcga ggatgcggcg gaggatcgac cagagcacga
     2701 tcaccgcggc gagcgcggcg gcggcgagga aggccgccat gcccagccgc ggctgcatgc
     2761 ggtagccggc gatttcgatc atcgcggtgc cgggcaggct gatcagccag gcgatcagcg
     2821 ccgtcagcag caggctgatg acgatccagg tggcgaggcg gatcacggcg cggttcccgc
     2881 cgccgccagc gccttggccc gcaggtcggt gaccagctgg tcggccgcgg cgtgggcggc
     2941 gatgtcgccg gcgaccggcg tggcggcctg ctgcattttc ggcggcagct gcgcgaggag
     3001 gctcatggcg gcagcgtagt cattgcggcc catggcgccc tcgaggcgcg acacgatcgc
     3061 ctcggggctg tcgccgggct gctcctcggc cgggcggagg gcgagcagcg acttggccca
     3121 gtcgagcgcg tcggtgcccc agtcgctgcc ggtggtgtcc cgggcggcga ggatgtcggg
     3181 aagcgccgtc tcgaagcgtt gcagcagcac gtcgggacgg ctgaggccgg tggccgccgc
     3241 ggcgtcgagc gccgccggca cggcgaggtc cggaacgatg gtcttgaggc cggccagctc
     3301 ggcggtgaac ggcttgccgc cgtcgaaggc gctctgcagc ccggcgagca gcagcggcag
     3361 cttcatggcc gggccgactt cgctcggcag ggccgaggcg atgtggtcgg tgagcgcctt
     3421 gcgggcagca tcaaggtcgg tgcgcagcga cgcggcgttg gcgtcgaggc cgtcgatgcg
     3481 gctggtgacg ctgccgaggg tggtctcgag ggtcgcgatg tgctgggcga tggcgccggc
     3541 gtcggtgccc gaggcgccag ccgagacggc gtcgacctcg gatttgaggg tggcgagctg
     3601 ggtctcgagc ggcgacaggt cgacagccgg ggccgcggcg ggcatcgccg ccttgacgtc
     3661 ggcgatcgac ttgttcaccg cggtcatgtc gccgtcgagc gtggtgatgg tggcgtcgag
     3721 gctgacctgc gtcctggtgg tcgaggcctt gagatcgccg aggccctgct cgatcgtgcc
     3781 cagccgggca tcctgcgcct cgaggcgcgg cgtcaggtcg ggcagcgccg gctggtgggt
     3841 cggcagcggc agcgcaatgg cgaccagata ggtgagaact gtgccgagca cggcaccggc
     3901 gacggcgacg ccggcgagca gcggccagga ggcgcggccg gcgctctccg gggtccgcgg
     3961 cgaggcatcg cggcgattga ggccgggcgg cgattcgggg gccgggcgcg gctcgccctc
     4021 gctccggccg gcggcgcggg cggtcaggtc gatcaccggg ggcttcaggg ggccggtcgc
     4081 gcggtcagcc atgggagacg tccttcctga accgatcatg ccgggttttg ggcgcgggca
     4141 aaagacagcg cgaggcccat catggcctcc tcgctggggt ggtcggcgag gccgacccgc
     4201 acgaaatggg cagcgaccag cggttcggca acggcttcgg agaggcaaag catgcccagc
     4261 cgggccttgt cgcggaggcc ggaggcgagg tcgacgaagg cttcggcggt gcgccgcgaa
     4321 taaaacagcg ccgcggcgag ggcgccggcc tcgaggcggg cccgggtggc gtcggtcagg
     4381 cgggtcgcag cgcgcatggc gtagaccggg gcggtgatga ccatgatgcc gtgcggggcg
     4441 agcgccttgg cgagatcggc ggcctgctcg cgggcggcgg gatagaacac cggaccggcg
     4501 atgccggccc gggcgagcag cgccacgaga tcgaacaggc tgccctcggc gctcgatacc
     4561 tcggcgaagc cgaagcggcg ggcaagggcg gcggtgcgat cgccgacggc atagagcggc
     4621 aggctgcgga a
//
LOCUS       DATAZA010000077         3380 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2558403, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000077 DATAZA010000000
VERSION     DATAZA010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3380
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2558403"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..431)
                     /locus_tag="VHZ56_01930"
     CDS             complement(<1..431)
                     /locus_tag="VHZ56_01930"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319619.1"
                     /note="catalyzes the formation of 2-isopropylmalate from
                     acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEX4296758.1"
                     /translation="MTTQSTTPSNQDRVYIFDTTLRDGEQSPGATMTLEEKLQVAEAL
                     DDMGVDIIEAGFPIASNGDFEAVVEVAKRAKNSVIAGLARAIPADIARAAEAVRHARQ
                     GRIHTFVSTSPIHLAHQMKKTQDEVLEIISATVAQARNLID"
     gene            complement(545..670)
                     /locus_tag="VHZ56_01935"
     CDS             complement(545..670)
                     /locus_tag="VHZ56_01935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296759.1"
                     /translation="MQRARAIAIAQAEEKARQTRMLLAAGLLLLPALLLLLLISP"
     gene            complement(764..1192)
                     /locus_tag="VHZ56_01940"
     CDS             complement(764..1192)
                     /locus_tag="VHZ56_01940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296760.1"
                     /translation="MDVVNNLLFWLHLVGLGLGAVASFGLPVVGRQMPTATAETRPTL
                     FKVAHGLTTAGRAGFGLLIVTGPLLVWLKFGGSAGFTGWFWAKMVLVVLLLILVIVAG
                     IMSKRAEGGDIAAAKRMPMISVIGIVLFLGVILCAVFAFS"
     gene            1237..1713
                     /locus_tag="VHZ56_01945"
     CDS             1237..1713
                     /locus_tag="VHZ56_01945"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4296761.1"
                     /translation="MIEQPSANRPRPARAADLPAIVALIDAAYRHYVPIIGRRPRPMD
                     DDQAARLARGELFVIDDGDALAAVMTAAVQPESLHIFNLAVHPGAQGRGLLRSMLDLA
                     EALARRAGKPKLTLYTNVAMTRNRQIYAHLGFVELGEHDAPGGYRIVFMERPLALP"
     gene            complement(1710..2597)
                     /locus_tag="VHZ56_01950"
     CDS             complement(1710..2597)
                     /locus_tag="VHZ56_01950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HEX4296762.1"
                     /translation="MKLDYLLLDVFTRDRLQGNPLAVVMRADGLLDDQMQRIASEFNL
                     SETVFITRPKTERHTAAVRIFTPQVELPFAGHPTVGAAVVLGLEGKSSAVRIEETIGI
                     ITCVIEKLDKRSGHARFALPHLPMVAGKPPEKRQLALTLGLEPEEIGFGLHQPSVYSA
                     GVIFYLVPVRGPDVLRRVTPERRGWPEVFPLGHNSVYVYTETPNEEGNDFAARMFSPG
                     MGLGEDPATGAAAAALIGELAGDAGDGQTEYIIRQGVEMGRPSLISIQIRKSGETLTH
                     GGIGGNAVIIGQGTLDLDA"
     gene            complement(2660..3157)
                     /locus_tag="VHZ56_01955"
     CDS             complement(2660..3157)
                     /locus_tag="VHZ56_01955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006471684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-degrading domain-containing protein"
                     /protein_id="HEX4296763.1"
                     /translation="MAKDDDIRLIIEQEKALIFPAFDEAIAFKLGSALRDAAIAGSHG
                     IVADVRTWDRPLFYMALPGTTGDNPNWVRRKANTVQRLMKSSYRVVLEKSWPEDFFPA
                     RRGLDNMDYALAGGGFPVRVKGAGLIGAVVVSGLHERDDHRLVVNAICDHLGLDKTAL
                     TLPPL"
BASE COUNT          539 a         1233 c         1034 g          574 t
ORIGIN      
        1 ttgtcgatga ggttgcgcgc ctgcgccacc gtcgcgctga tgatctccag cacctcgtcc
       61 tgcgtcttct tcatctggtg cgcgagatgg atcggcgaag tcgacacgaa ggtatggatg
      121 cggccctgcc gcgcatgccg caccgcttcc gccgcacgtg cgatatcggc cggaatggcc
      181 cgcgccagcc cggcgatcac cgagttcttc gcccgcttgg cgacttccac caccgcctcg
      241 aaatcgccgt tgctggcgat cggaaaacct gcctcgatga tgtcgacgcc catgtcgtcg
      301 agggcttcgg ccacctgcag cttttcctcg agcgtcatcg ttgcgccggg gctctgttcg
      361 ccatcgcgca gcgtcgtgtc gaaaatgtaa acccggtcct ggttgctcgg ggtcgtgctt
      421 tgcgtcgtca tgctgtggtt cctagctggc ggccgggcca aatgcctcgc ggccggacaa
      481 tccttctgtt cggttcagtc tgttctcccc tgaccacccg cccgcaatcg cgagccgtcg
      541 gtactcaggg gctgataaga aggagaagca ggagcgcggg aagcagcagc aagccggcag
      601 ccagaagcat ccgcgtctgg cgggccttct cttcggcctg ggcaatcgca atggcgcggg
      661 cgcgctgcat cggctgggtt cctgtccaac tcaatgatgc gcgactcccc cgaaaaacgc
      721 aagccgccag gcggccgcgc ttttcaggag ccatgcgcgg ccgctagctg aacgcgaaca
      781 ccgcgcacag gatcacgccc agaaacagta cgatgccgat cacgctgatc atcggcatgc
      841 gcttggcggc tgcgatatcg cccccctccg cccgcttgga catgatgccg gcgacgatca
      901 ccaggatcag cagcagcacc acgagcacca tcttcgccca gaaccagccg gtaaagcctg
      961 ccgatccgcc gaatttcagc cagaccagca gcgggccggt gacgatcagc agcccgaacc
     1021 cggcccggcc cgccgtcgtc aacccgtgcg ctaccttgaa cagcgtcggc cgggtttcgg
     1081 cggtggcagt gggcatctgc cggccgacga ccggcaggcc gaacgaggcc accgccccca
     1141 ggccgagccc gaccaggtgc agccagaaca acaaattatt gacgacgtcc attgatctct
     1201 ccccctcgat gaatcgtcac actagactgc ccgtccatga tcgaacagcc gtctgcgaac
     1261 cgccctcgac ccgctcgtgc cgccgacctg ccggcgatcg tcgcgctgat cgacgccgcc
     1321 tatcgccact acgtgccgat catcgggcgc cggccgcggc cgatggacga cgaccaggcg
     1381 gcccggctcg cccgcggcga actgttcgtc atcgacgacg gcgacgccct cgccgcggtc
     1441 atgaccgcgg cggtgcagcc cgaatccctc cacatcttca atcttgcggt ccatcccggc
     1501 gcccagggcc gtggcctgct gcgcagcatg ctggacttgg ctgaggctct cgcccgtcgc
     1561 gccggcaagc cgaagctgac gctctacacc aacgtcgcca tgacccggaa ccggcagatc
     1621 tacgcccatc tcggcttcgt cgagctcggc gagcacgacg cgccgggcgg ctatcggatc
     1681 gtcttcatgg agcggccgct ggcgctgccc taggcgtcga gatcgagcgt cccctgcccg
     1741 atgatcaccg cattgccgcc gatgccgcca tgcgtcagcg tctcgccgga tttgcggatc
     1801 tggatgctga tgaggctcgg ccgccccatc tcgacgccct gccggatgat gtattcggtc
     1861 tgcccgtcgc cggcatcgcc cgccaattcg ccaatcagcg ccgccgccgc cgcgccggtc
     1921 gctggatctt cgcccagccc catgcccggc gagaacatcc gcgccgcgaa gtcgttgcct
     1981 tcttcgttcg gcgtctcggt gtagacgtag accgagttgt ggccgagcgg aaacacctcg
     2041 ggccagccgc gccgctccgg cgtcacccgc cgcagcacgt cgggtccgcg caccggcacg
     2101 agatagaaga tcacccccgc cgaatagacc gagggctggt gcaggccgaa gccgatctcc
     2161 tccggctcga gccccagcgt cagcgccagt tgccgcttct ccggcggctt gccggcgacc
     2221 atcggcaggt gcggcagcgc gaaccgcgcg tgccctgacc gcttgtcgag cttctcgatg
     2281 acgcaggtga tgatgccgat cgtctcctcg atccgcacgg cgctggactt gccctcgagc
     2341 ccgagcacca ccgcggcgcc gaccgtcgga tggcccgcga acggcagctc gacctgcggc
     2401 gtgaatatac gcaccgctgc ggtgtgccgc tccgtcttgg gccgcgtgat gaacaccgtc
     2461 tcgctgaggt tgaactcgct ggcgatgcgc tgcatctggt cgtccagcag cccgtcggcg
     2521 cgcatcacca cggccagcgg attgccctgc agccggtccc gcgtgaacac atccagcaga
     2581 agatagtcga gtttcatctg acgctccgcg ggccgatgcg ttgcggcagt ttcccgtcgc
     2641 tgtcaagcaa cccgggcgcc tagagcggcg gcagcgtcaa cgccgtctta tcaagcccca
     2701 ggtgatcgca gatggcgttc accaccagcc ggtgatcgtc gcgctcgtgc agtcccgaca
     2761 ccaccaccgc gccgatcagc ccggctccct tgacccgcac cggaaagccg ccgccggcga
     2821 gcgcatagtc catgttgtcg agcccacggc gcgccgggaa gaaatcctcg ggccagctct
     2881 tttccagcac cacgcgatag ctcgacttca tcagccgctg cacggtgttg gctttgcgcc
     2941 gcacccagtt cggattgtcg ccggtggtcc ccggcagcgc catgtagaac agcggccggt
     3001 cccaggtccg cacatcggcc actatgccat ggctgccggc gatcgccgcg tcgcgcaggg
     3061 ccgagccgag cttgaaggcg atggcctcgt cgaacgccgg aaagatcagt gccttttcct
     3121 gctcgatgat aagccggatg tcgtcgtcct tggccatgta ctcttccccg gggaaaccgc
     3181 gcgcccttct agcatgaccg cagccgattg gcagggtgtt ccgcgggccg catgtccggc
     3241 tcgcaaccgg ctcagccgct ggcggtttgc accacgttcc cgggcgacgg gagctgccgg
     3301 cccggcggcc gagtatccgg caatttcatc gtgcgctctc gcccggccgg ccgttcataa
     3361 cccgttcaca cccttgcccg
//
LOCUS       DATAZA010000078         8445 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3835281, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000078 DATAZA010000000
VERSION     DATAZA010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 8445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8445
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3835281"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..764)
                     /locus_tag="VHZ56_01960"
     CDS             complement(<1..764)
                     /locus_tag="VHZ56_01960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEX4296764.1"
                     /translation="MSGASLIEAFLEMMRAERAAARNTVEAYRRDLADYAGFLAARGS
                     SVESAGRELVVAYLGGLEAQGLAASSAARRLSALRQFHKFLCADQIRPDDPTRIVGSP
                     KPRRPLPKVLSVAEVDRLLATAEAEANADASPQKAVAALRLYVLLELLYATGMRVSEL
                     VGLRRGAVMRDASFLTVTGKGNKERIVPVNDRARDAIKTWVATLGPGPWLFPAHGEDG
                     HLSRQVFGRDLKSLAGRAGIGSARIAPHVLRHAFAS"
     gene            complement(761..1087)
                     /locus_tag="VHZ56_01965"
     CDS             complement(761..1087)
                     /locus_tag="VHZ56_01965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296765.1"
                     /translation="MPTLIRLFVVLLVLAGLGFGGMIALTVMVDPGEKDITIKIPARD
                     LVAASQPIDLSNLPAPANIAPKDASASSGEAPASTASTASSIPDIAVDEDASDSGVKT
                     VDTNSE"
     gene            1238..1825
                     /locus_tag="VHZ56_01970"
     CDS             1238..1825
                     /locus_tag="VHZ56_01970"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_028175815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEX4296766.1"
                     /translation="MTAAASTSRDAHRDELLALLGGRPLVLVGMMGAGKTTVGRRVAA
                     RLGRHFVDSDEEVEKAAGMTIEDIFAAHGEADFRAGEVRVIARLLKDHDLVLGTGGGA
                     FMHAETRSLIKAAAVSVWIKADFELLFQRVQRRSNRPLLKTANPRETLKALIETRYPV
                     YAEADVTVVSRDVPQDQVATDVLDTLQRHLGGTNG"
     gene            1818..2930
                     /gene="aroB"
                     /locus_tag="VHZ56_01975"
     CDS             1818..2930
                     /gene="aroB"
                     /locus_tag="VHZ56_01975"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013892769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEX4296767.1"
                     /translation="MAEPVRVHVPLGERAYDILIGDGLLETAGERLKAMFPGRRFGIV
                     TDTEVARAQLPRLTRSLDAAGLRHAAVIVPNGEASKSIARLDEVVEGLLEARLERGDI
                     VLAMGGGVIGDLAGFAASVARRGMDFVQLPTSLLAQVDSSVGGKTGINSPHGKNLIGA
                     FHQPRLVLVDLGALATLPPRQFAAGYAEVVKYGLIDDEAFFFWLEQHQPEIFAGGPAR
                     AEAIARACMAKTRFVLADEKETGVRALLNLGHTFGHALEATTGYSDRLLHGEGVAIGM
                     VLAHGFSARLGLAPSQDTGRIAAHLQRAGLPTRLADIPGELPETEALMDAIAQDKKVV
                     RGTLTFILTRGIGQAFIERNVDATAVRGYLDDMRSA"
     gene            complement(3219..4133)
                     /locus_tag="VHZ56_01980"
     CDS             complement(3219..4133)
                     /locus_tag="VHZ56_01980"
                     /inference="COORDINATES: protein motif:HMM:NF028151.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX4296768.1"
                     /translation="MLVIGGEAANGPPRFEVDFDGTSLGQGTVAAAIDTASGGRFADA
                     SDKTPYVQTFTFAVPGAVFRPQGDVTVKFLNDDGSAGGHERGLYLASVTLNGRAVTAS
                     GLTTRLGSGDTPNRMVGEFLALPGGGAAGVSKAPPGGWPAPVAASATVTGGASAVQVA
                     AVAPVSSGAIAPKPDTDQEPLQTAALDPDPEGGPQSCDLDETYNVIGFNQNSNALTPR
                     LVDRLEQVADDIGGRQCNVVVTGYSSRQGEIASNALFSVERAQNSLRYLEEHGVKFLR
                     ASATGVGATDQFGQDFRQNRRVVITVTP"
     gene            complement(4432..4731)
                     /locus_tag="VHZ56_01985"
     CDS             complement(4432..4731)
                     /locus_tag="VHZ56_01985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009466348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HEX4296769.1"
                     /translation="MPVRDAIVAKLSAKFAPSHLEVIDESSRHQGHAGSRPGGETHFR
                     VRIAAAALDGLSRVAQHRAITDAVSDELKAGVHALAIEVRSAGSPQATTTITSIR"
     gene            4781..5419
                     /locus_tag="VHZ56_01990"
     CDS             4781..5419
                     /locus_tag="VHZ56_01990"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HEX4296770.1"
                     /translation="MKLDSKLFDRIRINPRHAVEPRPEIPDCAWEGCDQPGLYRAPKG
                     HRAEGEYHHFCLEHVRHYNTAFNFFADMTEKERDHHLHQTAETDGRPSWGLGSKPGGY
                     AGPRMPHKDAAAARAKRFSDPLHIWARYARANARGPQAERAVKLHEPDRRAFETLGFT
                     TSAKSDEIKRAYKALVKIHHPDANGGDKGSEDRLRSIIAAYSHLKTKGFVGA"
     gene            5523..6500
                     /gene="cobS"
                     /locus_tag="VHZ56_01995"
     CDS             5523..6500
                     /gene="cobS"
                     /locus_tag="VHZ56_01995"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051116 - cobaltochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobS"
                     /protein_id="HEX4296771.1"
                     /translation="MAEYTNLPTKEFSVRETFDIDSDMKVKGYAEADSHVPPLDPDYL
                     FDRNTTLAILAGFAFNRRVMVQGYHGTGKSTHIEQVAARLNWPLVRVNLDAHVSRIDL
                     VGKDAIVLKDGKQITEFRDGILPWAVQNNIALVFDEYDAGRPDVMFVIQRVLESSGRL
                     TLLDQNRVITPHPAFRLFSTTNTIGLGDTSGLYHGTQQINQGQMDRWSIVTTLNYLPH
                     DKEAGIVLAKAKSYRTEKGRKLVANMVRMADLTRSAFINGDLSTVMSPRTVITWAENA
                     EIFGDLGFAFRLTFLNKCDELERPVVAEFYQRVFGEDLPESAANLAVTA"
     gene            6635..>8445
                     /gene="cobT"
                     /locus_tag="VHZ56_02000"
     CDS             6635..>8445
                     /gene="cobT"
                     /locus_tag="VHZ56_02000"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007010279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051116 - cobaltochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobT"
                     /protein_id="HEX4296772.1"
                     /translation="MATAPRKPNKPDTTQAFKTAMGAAVRAVAGKPELEVSFSADRPL
                     LTADKARLANLPRLPTRRDIAIARGQGDAMAMRLASHDPDIHRRRSPVEPEARAAFDA
                     LEQARVEALGCMRMPGMTGNIREMLDDRLFRSNLAEVSSKDDAPLAEVLGLILRQRLA
                     GVDIPPSGNAIVDLWQKEIEQKASMSLTSLLQQFDNQDLFARAARHVLRDLNLVPEGE
                     LDDADGDNEEGDDDADPDRAEDDNKTPEQGEGESEDADAQEDQSPGDSDEAGETEGSD
                     QDFADSDEDAPGEAGDEAPLPPPGANAKEFQNLFTYKIFTQKFDEIVKAAELCPPEEL
                     DQLRALLDKQLENLAGAVARLANKLQRRLMAQQSRSWEFDLEEGLLDTARLTRVVTDP
                     LQALSFKVERDTDFRDTVVTLLIDNSGSMRGRPITIAAICGDILARTLERCGVKVEIL
                     GFTTRAWKGGKSREAWLEAGRPANPGRVNDIRHIIYKGADEPWRHARRNLGLMMREGL
                     LKENIDGEALEWAKRRLLARTENRRILMVISDGAPVDDSTQSVNAGNYLEAHLRQVIE
                     EIETRTPIQLVAVGIGHDVTRYYRRAVTLLDAEELGGA"
BASE COUNT         1441 a         3026 c         2715 g         1263 t
ORIGIN      
        1 tggctggcga aggcgtgccg cagcacgtgc ggggcaatcc gcgcgctgcc gataccggcg
       61 cgtccggcca ggctcttgag gtcgcggccg aacacctgcc ggctgagatg gccgtcctcg
      121 ccatgcgccg gaaacagcca cggccccggc ccgagcgtcg cgacccaggt cttgatcgcg
      181 tcgcgcgccc ggtcgttgac cggcacgatc cgctccttgt tgcccttgcc ggtgacggtg
      241 aggaaactcg cgtcccgcat taccgccccg cgcctgagcc ccaccagttc ggacacccgc
      301 atgccggtcg catacagcag ctcgagcagc acgtagagcc gtagcgccgc caccgccttc
      361 tgcggcgaag catcggcatt ggcttccgcc tcggcggtcg ccagcagcct gtcgacctcg
      421 gccaccgaca gcaccttggg caagggccgc cgcggcttcg gcgagccgac gatgcgcgtc
      481 ggatcgtcgg ggcggatctg gtcggcgcag aggaatttgt ggaactgccg cagcgccgac
      541 agccgccgcg ctgccgacga tgcggccagc ccctgcgctt cgagcccgcc gagataggcc
      601 accaccagct cgcgcccggc gctctcgacc gagctgccgc gcgccgcgag gaagccggca
      661 tagtcggcga gatcgcgccg gtacgcctcg acggtgttgc gcgccgcggc ccgctcggcc
      721 cgcatcatct cgaggaaggc ctcgatcagg gaagcgccgc tcattcgctg ttggtgtcga
      781 ccgtcttgac cccggaatcg ctggcgtcct cgtcgaccgc gatgtcgggg atcgacgatg
      841 ccgtcgacgc tgtcgatgcc ggtgcctcgc ccgacgaggc gctggcatcc ttgggcgcga
      901 tgttggccgg cgccggcaga ttgctgaggt cgatcggctg cgacgccgcc accaggtcgc
      961 gcgccgggat cttgatggtg atgtcctttt cgcccgggtc gaccatcacc gtgagcgcaa
     1021 tcatgccgcc aaagccgagc ccggccagca cgagaaggac gacgaacagg cggatcagtg
     1081 tcggcatgga ctctcgttgg gatgcaggcc gcactgttcc gccaatctgt ggcgcgatca
     1141 agggcgggac aggaccgcca tgctagcggc gaaagtctta ggattgactt tactccggcc
     1201 gcccgcttca acgccccgaa cttcgcccgg ggttggcatg accgccgcag cgtccacatc
     1261 gcgcgatgcg caccgcgacg aactgctggc tctgctcggc ggccggccgc tcgtgctcgt
     1321 cggcatgatg ggggccggca agaccaccgt cggacgccgc gtcgcggcgc ggctgggccg
     1381 ccacttcgtc gacagcgacg aagaagtcga aaaggccgcc ggcatgacca tcgaggacat
     1441 cttcgcggcg catggcgagg ccgacttccg cgccggcgag gtgcgggtca tcgcccgcct
     1501 gctgaaggac cacgacctgg tgctcggcac cggcggcggc gccttcatgc atgccgagac
     1561 ccgctcgctg atcaaggcgg cggcggtgtc ggtgtggatc aaggccgatt tcgagctgct
     1621 gttccagcga gtgcaacgcc gctccaaccg gccgctgctg aagaccgcca acccgcgcga
     1681 aaccctgaag gccctgatcg agacgcgcta tcccgtctat gccgaggccg acgtcaccgt
     1741 ggtcagccgc gacgtgccgc aggaccaggt ggcgaccgac gtgctcgaca ccctgcagcg
     1801 ccacctcggg ggcaccaatg gctgaaccgg tccgcgtcca cgtcccgctc ggcgagcggg
     1861 cctacgacat cctcatcggc gatggtttgc tggagacagc cggcgagcgc ctcaaggcga
     1921 tgttccccgg ccgccgcttc ggcatcgtca ccgacaccga ggtcgcccgc gcccagctgc
     1981 cgcggctcac ccgctcgctc gatgccgcgg ggctgcgcca cgccgcggtg atcgtgccca
     2041 atggcgaagc cagcaagtcc atcgcccggc tcgacgaggt ggtcgagggc ctgctcgaag
     2101 cgcggctcga gcgcggcgac atcgtgctgg cgatgggcgg cggcgtgatc ggcgacctcg
     2161 ccggctttgc cgccagcgtt gcccgccgcg gcatggattt cgtgcagctt ccgaccagcc
     2221 tgctggctca ggtcgacagt tccgtcggcg gcaagaccgg catcaactcg ccgcacggca
     2281 agaacctcat cggcgccttt caccagccgc gcctcgtcct tgtcgatctc ggtgcgctgg
     2341 cgaccttgcc gccgcgccag ttcgccgccg gctatgccga agtggtcaag tacgggctca
     2401 tcgacgacga ggcgttcttc ttctggctcg agcagcacca gccggaaatc ttcgccggcg
     2461 gcccggcccg cgccgaggcc atcgcccgcg cctgcatggc caagacccgc ttcgtgctgg
     2521 ccgacgaaaa ggagaccggg gtgcgggcgc tgctcaacct cggccacacc tttggccacg
     2581 ccctcgaggc aaccaccggt tattccgacc ggctgctgca cggcgaaggc gtcgccatcg
     2641 gcatggtgct ggcgcacggc ttttcggcgc ggctcggcct cgcccccagc caggacaccg
     2701 gacggatcgc ggcgcacctg cagcgggcgg ggctgccgac gcggctcgcc gacatcccgg
     2761 gcgaactgcc ggagaccgag gcgctgatgg acgccatcgc ccaggacaag aaggtggtgc
     2821 gcggcaccct gaccttcatc cttacccgcg gcatcggcca ggcattcatc gaacgcaacg
     2881 tcgacgccac ggcagtgcgc ggctatctcg acgacatgcg gtcggcctga agactgctga
     2941 aacttttacg gatgccactc cgtaactgac tcgggcggga aaaccccgcc cgggtccggc
     3001 gtcaccccgg tgccgcacaa gtgcggaatt gcctccaacc aggatccaga tcgacgcgaa
     3061 ctacactcaa ccactgggct ccgccttgcg ggggcgaagc gacgccggag ggataggccg
     3121 gattgacccg gcccatccaa tccctccctg gcgaggggga gggaatctct tgggcgagcg
     3181 cgcacggaca gatggcccga acgcgcatcc ttcggaggtt acggggtgac ggtgatcacc
     3241 acgcggcggt tctggcggaa gtcctggccg aactggtcgg tggctcccac ccccgtggcg
     3301 ctggcgcgca ggaacttgac gccatgctcc tcgaggtacc tgagcgagtt ctgtgcccgc
     3361 tcgacggaga acagcgcgtt cgaggcgatc tcgccctgcc ggctcgaata gccggtgacc
     3421 acgacgttgc actgccggcc gccgatatcg tctgcgacct gctcgagccg gtcgaccagt
     3481 cgcggggtga gcgcgttcga gttctggttg aagccgatga cgttgtaggt ctcatcgaga
     3541 tcgcaggact gcgggccgcc ttccggatcg ggatcgaggg ccgccgtctg cagcggctcc
     3601 tggtccgtgt ccggcttcgg cgcgatcgcc ccgctgctca ccggagcgac cgcggcaacc
     3661 tgcaccgccg acgccccgcc cgtgaccgtg gcgctcgccg ccaccggtgc cggccagccg
     3721 cccggcgggg ccttcgagac ccccgctgcg ccgccacccg gcagggccag gaattcgccg
     3781 accatgcggt tcggcgtgtc gcccgagccg agccgcgtgg tgaggcccga tgccgtcacc
     3841 gcccggccgt tgagcgtcac cgaggcgagg tagagcccgc gctcgtgtcc gccggcgctg
     3901 ccgtcgtcgt tgaggaactt gaccgtcacg tcgccctgcg ggcggaacac cgccccgggc
     3961 accgcgaagg tgaaggtctg cacgtagggt gtcttgtccg atgcgtcggc gaagcgaccc
     4021 ccgcttgccg tgtcgatggc ggccgcgacg gttccctgcc caagggacgt gccgtcgaaa
     4081 tccacctcga agcggggcgg accgttcgcc gcctcgcccc cgataaccag caccaaggtg
     4141 ctgtccgtgg ccaatactgt cgccggatac gcggcgatgc atgcagcggc catggcagtc
     4201 gctattcgcg acattttcat tgcgccctcc tgaaagctgt ctgcacgaaa agtgctagaa
     4261 agcgaggggg gcgacacttt gctcgcggcg tggcgggcga acacggcaga gccggagttc
     4321 cgccgtatta tggagaagcg gtcacacccg cggcgaaaat tcggcttcgc acgtcacgac
     4381 atagtcagcg gccacatctt cgccgcagac tcacgcctgc cgaaaaaatt cctatctgat
     4441 tgatgtgatc gttgtcgtgg cctgtggaga acctgcggaa cggacctcga tcgccagcgc
     4501 atggaccccg gccttgagct cgtcgctcac tgcgtcggtg atcgcccggt gctgcgccac
     4561 ccggctcagt ccatcgagcg cggcggcggc aatgcggacg cggaaatgcg tttctccgcc
     4621 cggacgggag ccggcatgac cttgatgccg tgagctctcg tcgatcactt caaggtggct
     4681 cggcgcgaat ttggctgaaa gttttgcaac aatcgcgtca cgaacaggca tatgtgtgct
     4741 cctcttgagc gcccgaaatt tgtgcacgta actaggactg atgaagctcg attccaagct
     4801 cttcgaccgc atccgcatca acccgcggca cgccgtcgaa ccccgccccg aaattcccga
     4861 ctgcgcctgg gagggctgcg accagcccgg cctgtaccgc gcccccaagg gccaccgggc
     4921 cgagggcgag taccatcatt tctgcctcga gcacgtccgc cactacaaca ccgccttcaa
     4981 cttcttcgcc gacatgacgg agaaggagcg tgatcatcat ctccaccaga ccgccgagac
     5041 cgacggccgg ccgagctggg gcctcggcag caagcccggc ggctatgccg gcccccgcat
     5101 gccgcacaag gatgcggccg cggcccgcgc caagcgcttc agcgacccgc tgcacatctg
     5161 ggcccgctac gcccgcgcca atgcccgcgg cccgcaggcc gaacgcgccg tcaagctgca
     5221 cgagcccgac cgccgcgcct tcgagacgct gggcttcacc acttcggcca agtccgacga
     5281 gatcaagcgc gcctacaagg cgctggtgaa gatccaccat cccgacgcca atggcggcga
     5341 caagggctcc gaggatcggc tgcgctcgat catcgccgcc tattcgcacc tcaagaccaa
     5401 gggtttcgtg ggcgcctgac gcccgccgaa cggcccccta ccctccccga aacgatgctg
     5461 ctatagagcc ccaacgcttg agccggctat gcccggctca attttcttta gagtcccagg
     5521 aaatggctga atacacgaac cttccgacca aggaattttc cgtccgcgag accttcgata
     5581 tcgacagcga catgaaggtg aagggctatg cggaagccga ttcgcacgtg cccccgctcg
     5641 atcccgatta cctgttcgac cgcaacacca cgctggccat cctcgccggc ttcgccttca
     5701 accgccgcgt catggtgcag ggctaccacg gcaccggcaa gtcgacgcac atcgagcagg
     5761 tcgcggcgcg cctcaactgg ccgctggtcc gcgtcaacct cgacgcccac gtgtcgcgta
     5821 tcgacctcgt cggcaaggac gcgatcgtcc tcaaggacgg caagcagatc accgaattcc
     5881 gcgacggcat cctgccgtgg gcggtgcaga acaacatcgc actggtgttc gacgaatacg
     5941 acgccggtcg ccccgacgtg atgttcgtca tccagcgcgt gctcgaatcc tcgggccggc
     6001 tgacgctgct cgaccagaac cgcgtcatca ccccgcaccc ggcgttccgg ctgttctcga
     6061 ccaccaacac catcgggctg ggcgacacgt ccggcctcta tcacggcacc cagcagatca
     6121 atcagggcca gatggaccgc tggtcgatcg tcaccacgct caactacctg ccgcacgaca
     6181 aggaagccgg gatcgtcctc gccaaggcca agagctaccg caccgaaaag ggcaggaagc
     6241 tcgtcgccaa catggtgcgc atggccgacc tcacccgctc cgctttcatc aacggcgatc
     6301 tgtcgacggt gatgagcccg cgcacggtga tcacctgggc cgagaacgcc gagatcttcg
     6361 gcgatctggg ctttgccttc cggctgacct tcctcaacaa atgcgacgag ctcgagcggc
     6421 cggtggtggc cgagttctac cagcgcgtgt tcggcgagga tttgccggag agcgccgcga
     6481 atctggcggt gaccgcctga cggtctccac ccgccgggtc attcccgcga aagcgggaaa
     6541 ctccgttcga gatcgtgggc ggagccaaac gaagctcccc gctttcgcgg ggatggttcc
     6601 gagagtgtga gagtttcgag cccgatcgca tcacatggcc accgcacccc gcaaacccaa
     6661 caagcccgac accacccagg cgttcaagac cgccatgggc gccgcggtgc gcgcggtggc
     6721 cggcaagccc gagctcgagg tcagcttttc cgccgaccgg ccgctgctca ctgccgacaa
     6781 ggcgcggctc gccaacctgc cgcgcctgcc gacgcggcgt gacatcgcca ttgcccgcgg
     6841 ccagggcgac gccatggcga tgcgcctcgc cagccacgat cccgacatcc accgccgccg
     6901 ctcgccggtc gagcccgagg cgcgcgccgc cttcgatgcg ctcgagcagg cgcgcgtcga
     6961 ggcgctcggc tgcatgcgca tgccgggcat gaccggcaac atccgcgaga tgctggacga
     7021 ccggctgttc cgctccaacc tcgccgaggt cagcagcaag gacgacgcgc cgctggccga
     7081 ggtgctcggg ctgatcctcc ggcagcggct cgccggcgtc gacatccccc cgtccggcaa
     7141 cgccatcgtc gacctctggc agaaggagat cgagcagaag gcctcgatgt cgctgacttc
     7201 gctgctgcag cagttcgaca accaggatct gtttgcccgc gctgcgcgcc atgtcctgcg
     7261 cgacctcaac ctcgttcccg agggcgaact cgacgacgcc gacggcgaca acgaggaggg
     7321 cgacgacgac gccgatcccg atcgggccga ggacgacaac aagacccccg agcagggcga
     7381 aggcgagagc gaggacgccg acgcgcagga agaccagtcg cccggcgaca gcgacgaggc
     7441 cggcgagacc gaaggcagcg accaggattt tgccgacagc gacgaggatg cccccggcga
     7501 agccggtgac gaggcgccgc tgccgccgcc cggcgccaac gccaaggaat tccagaacct
     7561 cttcacctac aagatcttca cccagaagtt cgacgagatc gtcaaggcgg ccgagctctg
     7621 cccgcccgaa gagctcgacc agctgcgcgc tctgctcgac aagcagctcg agaacctcgc
     7681 cggcgccgtc gcccgtctcg ccaacaagct gcagcggcgg ctgatggcgc agcagtcacg
     7741 cagctgggag ttcgacctcg aggaaggcct gctcgacacc gcgcgcctca cccgcgtcgt
     7801 caccgatccg ctgcaggcgc tgagcttcaa ggtcgaacgc gacaccgatt tccgcgacac
     7861 cgtggtgacg ctgctgatcg acaattccgg ctcgatgcgc ggccggccga tcaccatcgc
     7921 ggcgatctgc ggcgacatcc tcgcccgcac cctcgaacgc tgcggcgtca aggtcgaaat
     7981 cctcggcttc accacccgcg cctggaaggg cggcaagagc cgcgaagcat ggctggaggc
     8041 cggccggccc gccaatccgg gccgcgtcaa cgacattcgc cacatcatct acaagggcgc
     8101 cgacgaaccg tggcggcacg cccggcgcaa tctcgggctg atgatgcgcg aggggctgct
     8161 caaggaaaac atcgacggcg aagcgctcga atgggccaag cgccggctgc tcgcccgcac
     8221 cgagaaccgc cgtatcctga tggtcatttc cgacggcgcg ccggtcgacg actcgacgca
     8281 atcggtcaat gccggcaatt acctcgaggc gcatctgcgg caggtgatcg aggagatcga
     8341 gaccagaacg ccgatccagc tggtggccgt cggcatcggc cacgacgtca cccgctatta
     8401 ccgccgcgcc gtgaccctgc tcgacgccga ggagctgggc ggggc
//
LOCUS       DATAZA010000079         4550 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_585580, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000079 DATAZA010000000
VERSION     DATAZA010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4550
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_585580"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..768)
                     /locus_tag="VHZ56_02005"
     CDS             complement(64..768)
                     /locus_tag="VHZ56_02005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HEX4296773.1"
                     /translation="MKLTLIQPTDVPEALRGRFGPYSAMFHRMFAGQGFEFETVRLAD
                     GQPLPEPETLDAVLITGSSAGVYDNHLAWMQPLREFIRGAYAARTPMVGICFGHQIMA
                     DALGGDVRKSDKGWGLGRHVYGVKSRPAAVAGDLSEFAIACSHQDQVIAPPADAEVFL
                     ASEFTPNAGLAYRNGAAMSLQPHPEFEDDYTVALAEMRRGKTSDAVVEAAIASVARKS
                     DSAEMSGYLGAFLRQA"
     gene            complement(861..1385)
                     /gene="msrB"
                     /locus_tag="VHZ56_02010"
     CDS             complement(861..1385)
                     /gene="msrB"
                     /locus_tag="VHZ56_02010"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012559075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEX4296774.1"
                     /translation="MASLNRRSLLLGGTALVGLAALPYVTTMLGNALAGEGEQVPGTF
                     EVTHTDDEWKKILGDDAFYIMRRQGTETPGSSPLLNEHRVGVFACAGCDLQLFDSKTK
                     FDSGTGWPSFWQAMPNAVLTMDDTSVGMDRDECHCRRCGGHLGHLFHDVPNQPINNRY
                     CMDGLALKFEASAA"
     gene            complement(1483..2046)
                     /locus_tag="VHZ56_02015"
     CDS             complement(1483..2046)
                     /locus_tag="VHZ56_02015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018898244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fasciclin domain-containing protein"
                     /protein_id="HEX4296775.1"
                     /translation="MKISTLRAIALGTVLSMSVLSTVALAADPMVGGAPMYATKNIIQ
                     NAVNSKDHTTLVAAVKAAGLVATLEGKGPFTVFAPTNEAFAALPAGTVDNLLKPENKA
                     QLVKILECHVVAAKALSTDVMAMVKADGGSHVVDTVGGCKLTLKVAGGKVTVTDENGD
                     VADVTIADVIQSNGVIHVIDKVLLPKM"
     gene            complement(2372..3079)
                     /locus_tag="VHZ56_02020"
     CDS             complement(2372..3079)
                     /locus_tag="VHZ56_02020"
                     /inference="COORDINATES: protein motif:HMM:NF021604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HEX4296776.1"
                     /translation="MSDAIDSTGGDEDRFLAAEYALGVLPASEDQAFRARVRSEPTLA
                     AELSFWRTRLASLDTEFAETAAPASAWAGIERRLFAGAGRPGMWSSLALWRSFAGVAA
                     AIAVVAIGVNIATPRPDPRAFAAQLVAALSAQGSNVSMVALYNATTGEVRLTALSGAA
                     VPGKDYQLWAIEGSNAPKSMGLIKVDSGDSVKVSSDVLAGFGPGTTLAISLEPQGGSP
                     TGLPTGPVVAAGKAAQI"
     gene            complement(3076..3621)
                     /locus_tag="VHZ56_02025"
     CDS             complement(3076..3621)
                     /locus_tag="VHZ56_02025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018234997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX4296777.1"
                     /translation="MASDTADIADLIARCALRDRQAFRNLYGRTSAKLYGVTLRILKD
                     RSEADEALQEVYVKIWQRADRYVPGGYSPISWLVAVARNHSLDVLRARKPRSEDIDLA
                     LDVADAGPNPEQAEADRGERARIDNCLAQLDAEKADAVRGAYLDGYSYEELSARHQVP
                     LNTMRTWLRRSLLKLRECLSA"
     gene            3751..>4550
                     /gene="argB"
                     /locus_tag="VHZ56_02030"
     CDS             3751..>4550
                     /gene="argB"
                     /locus_tag="VHZ56_02030"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008833944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEX4296778.1"
                     /translation="MPDIESFSRDAAVLSQALPYMQRYEGKTVVVKYGGHAMGDIALG
                     RSFARDIALLKQSKVNPIVVHGGGPQIASMLKSLGIESKFEAGLRVTDQRTMDVVEMV
                     LAGSINKEIVALINAEGEWAIGLCGKDGNMVFARKAHKTVRDPDSNIERVLDLGFVGE
                     PVEVDRTLLDLLARSEMIPVLAPVAPGRDGHTYNINADTFAGAIAGACKASRLLFLTD
                     VPGVLDKNKKLIDELTVAEARGLIKDGTVSGGMIPKVETCIEAIERGV"
BASE COUNT          791 a         1457 c         1552 g          750 t
ORIGIN      
        1 catcgccggc cggtcgcgga tgagcaaggg cgagctgcag cgcgcgctgg gcggcggcgg
       61 acgctaggcc tggcgcagga aggcgccgag gtaacctgac atctcggcgc tgtccgattt
      121 gcgggcgacc gatgcaatgg cagcctcgac gacggcgtcc gaggtcttgc cgcggcgcat
      181 ctcggcgagg gcgactgtgt agtcgtcctc gaattcggga tgcggctgca ggctcatcgc
      241 ggcaccgttg cggtaggcga gcccggcgtt gggggtgaac tcggaagcga gaaacacctc
      301 tgcgtcggcg ggcggcgcga tcacctggtc ctggtgcgag caggcgatgg cgaactccga
      361 caggtcgccg gcaacggccg cggggcgcga cttcacccca tagacgtggc ggccgagacc
      421 ccagcccttg tcggacttgc gtacgtcgcc acccagggcg tcggccatga tctggtggcc
      481 gaagcagatg ccgaccatcg gggtcctggc ggcgtaggcg ccgcggatga attcgcgcag
      541 cggctgcatc cacgccagat ggttgtcgta gaccccggcc gacgagccgg tgatgagcac
      601 ggcgtcgagc gtctccggct ccggcagcgg ctggccatcg gcaagtcgca ccgtctcgaa
      661 ctcgaagccc tggccggcga acatgcggtg gaacatcgcg gagtacggcc cgaaccgccc
      721 ccgcagggct tcgggcacgt cagtcggctg gatcagagtg agtttcatga gccaaacaaa
      781 tggctcgcgc gaaggtgtcg cgcaagccgg tttctgccgc aatccagcta tgtctcagcc
      841 gctcaggctg ccgacgcctc tcaggccgcg gacgcctcga acttcagggc caggccgtcc
      901 atgcaatagc ggttgttgat cggctggttg ggaacatcgt ggaagaggtg cccgaggtgc
      961 ccgccgcagc ggcggcagtg gcattcgtcc cggtccatcc caaccgacgt gtcgtccatg
     1021 gtcaggacgg cgttgggcat cgcctgccag aagctgggcc agccggtgcc gctgtcgaac
     1081 ttggtcttgc tgtcgaacag ctgcaggtcg cagccggcgc aggcgaacac gccgacgcgg
     1141 tgctcgttga gcaatggcga cgagcccggg gtttcagtgc cctggcggcg catgatgtag
     1201 aaggcgtcgt cgccgaggat cttcttccac tcgtcgtcgg tgtgggtgac ctcgaaggta
     1261 ccgggcacct gttccccctc cccggccagc gcgttgccga gcatggtggt tacgtacggc
     1321 agagcggcaa gtccgacgag ggcggtgccg ccgagcagca gcgaacgtcg attcaatgag
     1381 gccattttcc cctccaaaaa gaacagcgcg tgtcctacca caagatagga cacgcgcacg
     1441 tcaattgcct gtgtccggga agtaaccccg acacactgcc gatcacatct tgggcagcag
     1501 aaccttgtcg atgacgtgga tgacgccgtt cgactggatg acgtcggcga tagtcacgtc
     1561 ggcgacatcg ccgttctcgt cggtgacagt caccttgccg ccggcgacct tgagggtcag
     1621 cttgcaaccg ccgaccgtgt cgacgacgtg cgaaccgcca tcggccttga ccatcgccat
     1681 gacgtcggtc gacagagcct tggccgccac cacgtggcac tcgaggatct tcaccagctg
     1741 cgccttgttc tcaggcttca gcaggttgtc gacggtgccg gccggcagcg cggcgaaggc
     1801 ctcgttggtc ggcgcgaaca cggtgaacgg gcctttgccc tcgagggtcg cgacgagccc
     1861 ggcggccttc acggcagcga cgagggtcgt gtgatccttc gagttcacgg cgttctggat
     1921 gatgttcttg gtggcgtaca tcggagcacc accgaccatc gggtcagcgg cgagagcgac
     1981 ggtcgagagg accgacatcg agagcacggt gccgagcgca atggcgcgca gggtggagat
     2041 cttcatggct gacttccttc ctttggggga ccggtatgtt ccggttgaga cagccagagt
     2101 tacgaagccc gtgaagggtc agtttccaaa agcgatccgc gaaaaaatat atcccaaacg
     2161 gcgatccaga gcgaaactcc cgctcgtatt gggccgttgc ctgctttgcc ggactaatgg
     2221 agaccggcag ggaacgatcg gcaatcgatc gccgagcccc actccccgcc ggtctcctcg
     2281 cacaatgacc caagtatggt cgtcttgtcc ggacagccat gagacgcccg tcgcgagtac
     2341 cggcttggtc agccggcaac aacaatgttg gctatatctg cgcggccttg ccggcggcga
     2401 cgacgggtcc ggtaggcagg ccggtcggcg agccgccctg cggctcgagc gagatggcaa
     2461 gcgtcgttcc cggcccgaag ccggccagca catcggagct gaccttgacg ctgtcgccgc
     2521 tgtcgacctt gatcaggccc atcgacttgg gggcattgct gccttcgatc gcccagagct
     2581 ggtagtcctt gcccggcacc gcggcgccgg acagcgccgt cagccgcacc tcgccggtcg
     2641 tggcattgta gagcgcgacc atgctgacat tgctgccctg ggcactgagc gccgcgacaa
     2701 gctgcgcggc gaaggcccgc ggatcagggc ggggcgtggc aatgttgacg ccgatggcga
     2761 cgaccgcaat ggccgccgcg acaccggcga agctccgcca cagcgccagc gaactccaca
     2821 tgccaggcct gccggcaccc gcaaagagcc gccgctcgat gccggcccag gccgatgccg
     2881 gcgcggcggt ctcggcgaac tcggtgtcga ggctcgccag ccgggtgcgc cagaacgaga
     2941 gctcggcggc aagcgtcggc tcgctgcgga cgcgggcacg aaaggcctgg tcctcggacg
     3001 cgggaaggac gccgagcgca tactcggccg cgaggaagcg gtcctcgtct ccaccggtgc
     3061 tgtcgatcgc gtcgctcatg ccgaaaggca ctctctcagt ttcaacaggc tgcggcgcag
     3121 ccaggttcgc atggtgttga gcggcacctg gtgacgggcc gacaactcct cgtagctgta
     3181 accgtcgaga taggcgccgc gcacggcgtc agccttctcg gcgtcgagct gggccaggca
     3241 attgtcgatg cgggcgcgtt caccgcgatc ggcttccgcc tgttcggggt taggaccggc
     3301 atcggccacg tcgagggcca gatcgatgtc ttcgctccgc ggcttgcggg cacggaggac
     3361 gtcgagcgag tggttgcggg cgaccgccac cagccaggag atcgggctat agccgccggg
     3421 cacgtagcgg tcggcgcgct gccagatctt gacgtaaacc tcctgcagcg cctcgtcggc
     3481 ctctgagcgg tccttcaaga tacgcagcgt cacgccgtag agtttcgcgc tggtgcggcc
     3541 ataaagattg cggaaagcct gccgatcgcg gagcgcgcag cgggcgatca gatcggcgat
     3601 gtcggcagta tcgctcgcca tatcgtgacc ctagcgcgcg ccagccgtcc tgcctatccc
     3661 cgggccggga tcggcggcgg gggaaaatcc gctttcctgt gcggacggat gctttataca
     3721 cctcgccgca agatgagccc gaagcgaaaa atgccggata tcgagtcgtt ttcccgcgat
     3781 gccgccgtcc tgtcgcaggc gctgccctat atgcagcgct acgaaggcaa gaccgtggtg
     3841 gtcaagtatg gcgggcacgc catgggcgat atcgcgctgg gccgcagctt tgcccgcgac
     3901 atcgcgctgc tcaagcagtc caaggtcaat cccatcgtcg tccacggggg cggcccgcag
     3961 attgcctcga tgctcaagag cctgggcatc gagagcaagt tcgaggccgg cctgcgcgtc
     4021 accgaccagc ggaccatgga cgtggtcgaa atggtgctcg ccggctcgat caacaaggaa
     4081 atcgtggcgc tgatcaacgc cgagggcgag tgggcgatcg ggctgtgcgg caaggacggc
     4141 aacatggtct ttgcgcggaa ggcccacaag acggtgcgcg atccggactc gaacatcgag
     4201 cgggtgctag atctcggttt cgtcggcgaa ccggtcgagg tcgaccgcac gctgctcgac
     4261 cttctggcgc gctcggaaat gatcccggtg ctggcgccgg tagcgcccgg ccgcgacggc
     4321 cacacctaca acatcaacgc cgacacattc gccggtgcca ttgccggcgc ctgcaaggcc
     4381 tcacgcctgc tgttcctcac cgacgtgccc ggcgtgctcg acaagaacaa gaagctgatc
     4441 gacgagctga ccgtggccga ggccaggggg ctgatcaagg atggtacggt ttcgggcggc
     4501 atgatcccca aggtcgagac ctgcattgag gcgatcgagc gcggcgtcga
//
LOCUS       DATAZA010000080         2718 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_469684, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000080 DATAZA010000000
VERSION     DATAZA010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2718
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_469684"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="VHZ56_02035"
     CDS             complement(<1..383)
                     /locus_tag="VHZ56_02035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006325665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HEX4296779.1"
                     /translation="MILFPAIDLKDGKCVRLLRGDMARATVFNDSPATQAKAFAQAGC
                     EWLHLVDLNGAVEGHPVNKAAVVEILKTVEVPAQLGGGIRTIESIAQWIEAGVKRVIL
                     GTVAVKEPGLVKAACKQWPGQVAVG"
     gene            complement(1094..2473)
                     /locus_tag="VHZ56_02040"
     CDS             complement(1094..2473)
                     /locus_tag="VHZ56_02040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012706579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1380 family transposase"
                     /protein_id="HEX4296780.1"
                     /translation="MRTDCSVDLFGFEPVEGRRLEAAFDGGAMTSDAGALLLGLADRR
                     LGLLRRFAACFIDGRWSNAVEHTIEKLVGQRVLGIALGYEDVNDHDELRYDPALAATL
                     GRLAGRRRRCAALAGKSTLNRLEHAPVNDGERYHKIGHVPEAIEALLVEVFLEAHQRP
                     PEEIVLDLDATDDPIHGEQEGRFFHGYYGGYCYLPLYVFCGRHLLASKLRRSNIDGAA
                     GAREEVERIVGQIRSRWPEVRIVLRADSGFAREALMAWCEAHGVDYLFGLARNVRLEA
                     EIAGELAEAAAESAASGQAARRFKDFLWTTRDSWSRRRRVVGKAEHTPKGSNPRFVVT
                     SLTQQDHDARALYEDVYCARGEMENRIKECQLDLFADRTSTATMRANQLRLWFASIAY
                     VLLEGVRRIGLKTTKLADATCGSIRLKLLKIGALVRISVRRVKVAMASSHPRQRDWAI
                     AYAALGAAR"
BASE COUNT          465 a          915 c          873 g          465 t
ORIGIN      
        1 atgccgaccg cgacctggcc cggccactgc ttgcaggcgg ccttcaccag ccccggctcc
       61 ttgaccgcga cggtgcccag gatcacccgc ttgacgcccg cctcgatcca ctgcgcgatg
      121 ctctcgatgg tgcggatgcc gccgccgagc tgggccggca cctcgaccgt cttcaggatc
      181 tcgaccaccg cggccttgtt gaccggatgg ccttcgaccg cgccgttgag gtcgaccagg
      241 tgcagccatt cgcagccggc ctgggcgaag gccttggcct gggtcgccgg gctgtcgttg
      301 aacacggtgg ccctggccat gtcgccgcgc agcaagcgca cgcacttgcc gtccttcaaa
      361 tcgatggcag gaaaaaggat catcgcggcg cgggatttag cgcgttggcg gcgctcgcgc
      421 caccctccgt agtacggccg tggaaaccat ccccattatc ccgctgactc accggagccg
      481 gtggattctc acgcttgtcg gatcgcgtgt ggaggcagaa ggttcttctc acgaagttcg
      541 gcgaccgcct cggcggagac cggacggaga gagggaccgc aaggttcctc gcggtggcga
      601 aagccgctga tgggcctctg gagtgccgcg acgaaatcgt cttcgacgca gcaccgcacc
      661 tcctctcgag gggagcgtgt gacgggaaac cggagccggg gcccgatgcg aacggtccat
      721 gcgcatggac cggacgtgcc ccgaggatgg tgatggcggg cggggatccc gcaactcacc
      781 ggccactcgc ggctccgtaa aggagttgtg gccagccgcg ccccgcggcg agtgcgacga
      841 acgctcgacg aaggtgcgtg cgaagcggcg agaccgggaa actggtctcg ccgttttctt
      901 ttgctgggaa cgttgagcta acccggatat ctcacggtat ctcgagggtc gatgtttctg
      961 atggcagcga gaagtttgtg cccgttggcc ggtacggccg gccggtaaat ggtgtcatgc
     1021 ggacgcgcca acggtggccg tgtcgtcggc gttggctgat gtgtgatgtc gactatgcgc
     1081 tgtctggctc gtgtcagcgc gcggcgccaa gggcggcata ggcgattgcc cagtcgcgct
     1141 ggcgaggatg gctcgacgcc atggcgacct tgacgcgccg gacgctgatg cggacgaggg
     1201 caccgatctt gagaagcttg aggcggatcg agccgcaggt cgcatcggca agcttggtcg
     1261 tcttgagccc gatgcgacgc actccttcga gcaacacgta ggcgatcgaa gcgaaccaca
     1321 ggcggagctg gttcgcgcgc atggtggccg tcgaggttcg atctgcgaag aggtcgagct
     1381 ggcactcctt gatgcggttc tccatctcgc cgcgggcaca gtagacgtcc tcgtagagtg
     1441 cgcgggcgtc gtggtcctgt tgcgtgagcg aggtcacgac gaagcgtgga ttggagcctt
     1501 tcggcgtgtg ctcggccttg ccgaccacgc gccgccgccg gctccagctg tcgcgcgtcg
     1561 tccacaggaa gtccttgaag cggcgcgctg cctgtccgct agccgcgctt tccgccgccg
     1621 cctcggccag ttcaccggcg atctccgcct ccagtcgtac attgcgcgcc aagccgaaca
     1681 ggtaatcgac gccatgggcc tcgcaccacg ccatcagcgc ctcgcgagca aagcccgagt
     1741 cggcccgcag cacgatccgc acctcgggcc accggctacg gatctgcccg acgatgcgct
     1801 cgacctcctc gcgcgccccg gccgcgccgt cgatgttcga acgccgcagc ttcgaggcca
     1861 acagatgccg gccgcagaag acgtagagcg gcaggtagca atagccgccg tagtagccgt
     1921 ggaagaaccg gccctcctgc tcgccgtgga tcggatcgtc ggtcgcgtcg agatcgagca
     1981 cgatctcctc gggtggacgc tgatgggcct ccaggaagac ctcgaccagc agcgcttcga
     2041 tcgcttcagg cacatgaccg atcttgtgat accgctcccc gtcattcacc ggtgcgtgct
     2101 ccagccggtt cagcgtcgac ttcccggcca gcgccgcaca gcgccgacgg cgccccgcca
     2161 gccggcccag cgtcgccgcc agggccgggt cgtaccgaag ctcgtcgtgg tcgttgacgt
     2221 cttcgtaacc cagcgcgatc cccagaaccc gctggcccac cagcttctcg atcgtatgct
     2281 cgaccgcatt cgaccatcgc ccgtcgatga agcaggccgc gaagcgccgc agcaatccaa
     2341 gtcgccgatc cgccaacccc agaagcaacg ctcctgcgtc ggaggtcatc gctccaccgt
     2401 cgaacgccgc ctccaaacgg cggccttcaa caggttcaaa accaaacaaa tccacgctac
     2461 agtctgttcg catcggagct cttcctggga cagagtgaag tcgttgctgc acaacaactt
     2521 tctcaaagcc cgtgctccga tgaacctaaa ctccgtgaga tatccgggct agagcagcct
     2581 cgcgagcaag cgccgcaacc ggcgcgtatc gctgccttta atcaggctgt cgatacatca
     2641 accgcttgcc tttgccagcg gtgagcagcg catcggcgcg ggccgcatcg tcaaggccgc
     2701 gagtgttcgc acgaaaat
//
LOCUS       DATAZA010000081         5561 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3951692, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000081 DATAZA010000000
VERSION     DATAZA010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5561
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3951692"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..508
                     /locus_tag="VHZ56_02045"
     CDS             <1..508
                     /locus_tag="VHZ56_02045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEX4296781.1"
                     /translation="VRELFGFSFSTWRFHLRGQTIRSPHDVGRVRNLTVGSMMRADIR
                     VVSDRTGLVEFRKSFPLGSTERVIATDKAGRYTGIMLVADAFQPDVETRSADGSIEPL
                     LRYRDRFLLPGLNAADAAKLFQKAESEELAVVDNLGNRKVVGLLTEKYLLRRYAEELD
                     KGLKDVTG"
     gene            732..1979
                     /locus_tag="VHZ56_02050"
     CDS             732..1979
                     /locus_tag="VHZ56_02050"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX4296782.1"
                     /translation="MLKLTNGLAIAVALAGMLTAAAARADGVTLTLSRWAGPQADAQQ
                     PLLDEYAKLSGDTIKLDAIDYGQLKQKQTLNMSTKTGAYDLIYVPEAWFNEYADAGYL
                     TKLDDMVKDPALTGADWDFADFSKSSLGVYTAKDGSLQALPYFAQTPLLVYNKDEFAK
                     ANLQPPKTWDDLLKAAKYFHDQGTGIALPFKQGPAITNVMAVLLAGDNTDFFGKDGKL
                     DLTDPAVVETVKFMQQLSQYELNGSNGWHWDEVNKVLQFGQAPLGITISGLFTALEDP
                     KQSSVAGHLGYLPIPYNKAAAGLLQTWAWAVPADSKNPKEAFKLAAWLDSKKALTEMS
                     TADPSFISFRSSLASDPELAKHSPWLAAAADAFGHGVTLPLQAAAPQLLDALATGLSG
                     VVTSGTDPAAMLADVQSKQAANF"
     gene            2062..2991
                     /locus_tag="VHZ56_02055"
     CDS             2062..2991
                     /locus_tag="VHZ56_02055"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX4296783.1"
                     /translation="MTLTLAESPAPTRSISPHARRDIQLGFLLLAPAAATVFLVMIVP
                     LGFALWASFYDYKLGQESRMAFVFLGNYVKFFTDPAALHALGNTVLFTVLSLGLGLTI
                     GVGMSVLLKGVSARAANFMRGIFAMPILISPIIVSLIWRYMYDPTFGLLYWLLGLVHL
                     QNFGGLTNTLTALVCVVVADVWHTTPFIILVSSAGLTVIPDDLYEAARVDGATPWQML
                     VRITLPLLAKILVVITLIRGSDAFRTFDLVYGLTGGGPADATSTISLYAYKQAFEDNQ
                     MGYAMAASIVTLICLVGLFGPLLRNSATSGENA"
     gene            2991..3815
                     /locus_tag="VHZ56_02060"
     CDS             2991..3815
                     /locus_tag="VHZ56_02060"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX4296784.1"
                     /translation="MARLSFGATARWIVLILFAVWTIVPIALVVINSFKTARDIFTRA
                     PTLIFTPVLDNYVDAFTKANFGQYYLNSLIVALASTALVILIGTFAAYALTSFRLVGA
                     NTIAGGFLVGKLVPTISMLLPLFVIINAIGLRGTLGGPIIAHTALNLPFVVWLMMGFI
                     RDVPRDLLQAAMIDGCSRMQAFWRVLVPVILPGIAAAFVLSMQYSWNELMFSLQLTTL
                     GTYTLPVGIAGFVGSISVNWGLSSAAATATMVPLIILGFFVQKHIAAGTTGGAVKG"
     gene            complement(3869..4618)
                     /locus_tag="VHZ56_02065"
     CDS             complement(3869..4618)
                     /locus_tag="VHZ56_02065"
                     /inference="COORDINATES: protein motif:HMM:NF019322.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX4296785.1"
                     /translation="MTVSTRELFMDLDRSSPIPLYYQIAKRLQDAIQSGRLPPGSRIE
                     NELQIANDLGISRPTVRRAIRELVDQGLLVRRRGVGTQVVRGQVRRNVELTSLYDALS
                     AAGRSPSTKILVHEAIEPSMEVLDSLALPPGTTVLHAVRVRSADGVPFAVLDNYLPPE
                     FLDLTAEQMRKHGLYQLMRARGTTLRVAHQTIGARSCRKDEAKHLLLKAGAPVLTMQR
                     VFFDQSGHPVELGYHCYRPDLYAFDMTVVDK"
     gene            4761..>5561
                     /locus_tag="VHZ56_02070"
     CDS             4761..>5561
                     /locus_tag="VHZ56_02070"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEX4296786.1"
                     /translation="MSNAAANGEMLAVVKTGPGSANVRLERVPEPSAEPGMARLRVLA
                     SGICGTDIHIARDEYAHDAPVVMGHEILGVVDSVGDDADRALLGKRVACETYFSTCGK
                     CDWCRAGRPNLCPNRRSIGSFENGGFAHYLVVPVRNLHPLPDFLDEIEGVLSEPLACV
                     TQCLLDPAVINPGDRVLVTGPGAMGQLAAQVALAGGAEVTLAGLEKDAERLAVARSLG
                     IATTTEEPPADVYDVVVECSGSAAAAKACLRSARRGGRYIQVGIFGGEI"
BASE COUNT          927 a         1876 c         1769 g          989 t
ORIGIN      
        1 tgtccgcgaa ctcttcggct tctcgttctc gacctggcgc tttcacctgc gcggccagac
       61 catccgctcg ccccacgacg tcggtcgcgt gcgcaacctg acggtgggct cgatgatgcg
      121 ggccgacatc cgtgtggtct ccgaccgcac cggcctcgtc gagttccgca agagctttcc
      181 gcttggctcg accgagcgcg tcatcgccac cgacaaggcc ggccgctaca ccgggatcat
      241 gctcgtggcc gatgcattcc agccggacgt cgagacgcgc tcggccgatg gctcgatcga
      301 accgctgctg cggtatcgcg atcgcttcct gctgccgggc ctgaacgcgg cagacgccgc
      361 aaaactgttc cagaaagccg aaagcgagga actggcggtc gtcgacaatc tgggcaaccg
      421 caaggtggtc ggcctgctga ccgagaaata cctgctgcgc cgctacgccg aagagctcga
      481 caaggggctg aaggacgtga ccggctagcg ccaccggcgg gttgccaggc aggctccgga
      541 gtcctcaccg accgccgctg ttcacagcac cgcgacgtcg ccgcttgacc gcatatgtaa
      601 ttacattaag atgatctcgc aaatgcgaca ggctcgccgc cttcctcttg cggcttcgtc
      661 gccaagccag ttcgggtggc atcggcggtt gccggtgacc aggacctcga gcagtcaatg
      721 ggaggattga agtgcttaaa cttacgaatg gactggccat cgccgtggcg ctggccggca
      781 tgctcaccgc cgctgcggcg cgtgccgatg gcgtcaccct gacgctgtcg cgctgggctg
      841 gcccgcaggc cgacgcgcaa cagccgctgc tcgacgaata cgccaagctg agcggcgaca
      901 cgatcaagct cgacgccatc gactacggcc agctgaagca gaagcagacg ctcaacatga
      961 gcaccaagac cggtgcctat gacctgatct acgtgccgga ggcctggttc aacgaatatg
     1021 ccgacgccgg ctatctcacc aagctcgacg acatggtgaa ggacccggcc ctcaccggcg
     1081 ccgactggga ttttgccgat ttctcgaaat cgtcgctggg tgtctacacg gccaaggacg
     1141 gctcgctgca ggccctgccg tatttcgccc agacgccgct gctcgtctac aacaaggacg
     1201 agttcgccaa ggccaacctg cagccgccca agacctggga cgacctgctc aaggcagcca
     1261 aatacttcca cgaccagggc accggcatcg ccctgccgtt caagcagggt ccggcgatca
     1321 ccaacgtcat ggcggtgctg ctcgccggcg acaacaccga tttcttcggc aaggacggca
     1381 agctcgacct caccgatccg gccgtggtcg agacggtcaa gttcatgcag cagctcagcc
     1441 agtatgagct caacggctcg aacggctggc actgggacga ggtgaacaag gtgctgcagt
     1501 tcggccaggc gccgctcggc atcaccatct cgggcctgtt cacggcgctc gaggacccca
     1561 agcagtcgag cgtcgcggga cacctcggct atctgccgat cccctacaac aaggcagcag
     1621 ccggattgct gcagacctgg gcatgggcag tcccggccga cagcaagaac cccaaggaag
     1681 cgttcaagct cgcggcctgg ctcgacagca agaaggccct gaccgaaatg agcaccgccg
     1741 atccgtcgtt catcagcttc cgctcgtcgc tggcctccga tcccgagctc gccaagcaca
     1801 gcccctggct ggcagcggcg gccgacgcct tcggtcatgg cgtgaccctg ccgttgcagg
     1861 ccgccgcgcc gcagttgctc gatgcgcttg ccacgggcct ctcgggcgtc gtgaccagcg
     1921 gcaccgaccc ggccgcgatg ctggccgacg tgcagtccaa gcaggcagcg aacttctgag
     1981 ttctgccatc accagtccgg ccgcgggtgg attaagctcc tgcccgcggc ccaggagttc
     2041 ggccgcagaa tggacgggca aatgactctg actcttgccg agagcccggc gccgacgcgg
     2101 tcgatcagcc cgcacgcccg ccgcgacatc cagctcggct tcctgctgct cgcgccggcc
     2161 gccgccaccg tgttcctggt gatgatcgtg ccgctcggct ttgccctctg ggccagcttc
     2221 tatgactaca agctggggca ggaaagccgc atggccttcg tcttcctcgg caactacgtg
     2281 aagttcttca ccgacccggc ggcgctgcac gcgctcggca acaccgtgct gttcaccgtg
     2341 ctgtcgctgg gcctcgggct caccatcggc gtcggcatgt cggtgctgct caagggcgtc
     2401 tcggcgcgcg ccgccaattt catgcgcggc atcttcgcca tgcccatcct catttcgccg
     2461 atcatcgtca gcctgatctg gcgctacatg tacgacccga cattcggcct cctctactgg
     2521 ctgctcggcc tggtgcacct gcagaatttc ggcgggctca ccaacacgct gacggcgctg
     2581 gtctgcgtgg tagtcgccga tgtctggcac acgacgccgt tcatcattct cgtctcgtcg
     2641 gcgggactga cggtgatccc cgacgatctc tacgaggcgg cgcgggtcga cggcgcaacg
     2701 ccgtggcaga tgctggtccg catcacgctg ccgctgctgg ccaagatcct cgtcgtcatc
     2761 acgctgatcc gcggctcgga tgcgttccgc accttcgacc tggtctatgg cctcaccggc
     2821 ggcgggccgg ccgacgccac cagcaccatc agcctctacg cctacaagca ggcgttcgag
     2881 gacaaccaga tgggctatgc catggctgcg tcgatcgtga cgctgatctg cctcgtcggg
     2941 cttttcgggc cgctgctgcg caactccgcc accagcgggg agaacgcctg atggcccggc
     3001 tgtccttcgg cgccactgcg cgctggattg tgctgatcct gtttgcggtg tggaccatcg
     3061 ttccgatcgc cctggtggtg atcaactcgt tcaagaccgc cagggacatt ttcacccgcg
     3121 ccccgacgct gatcttcacg ccggtgctcg acaactatgt cgacgcgttc accaaggcca
     3181 atttcggcca gtactacctc aacagcctga tcgtcgcgct ggcctcgacc gcgctggtga
     3241 tcctgatcgg caccttcgcc gcctatgcgc tgaccagctt ccggctggtg ggcgccaaca
     3301 ccatcgccgg cggcttcctc gtcggcaagc tggtgccgac gatctcgatg ctgctgccgc
     3361 tgttcgtgat catcaacgcc atcgggctgc gtggcacgct gggcggcccg atcatcgcgc
     3421 ataccgcgct caacctgccg ttcgtggtgt ggctgatgat gggcttcatc cgcgacgtgc
     3481 cgcgcgacct gctgcaggcg gccatgatcg acggctgctc gcgcatgcag gcattctggc
     3541 gcgtgctggt gccggtgatc ctgcccggca tcgccgccgc cttcgtgctc tcgatgcagt
     3601 attcgtggaa cgagctgatg ttctcgctgc agctgacgac gctgggcacc tacacgctgc
     3661 cggtcgggat cgccggcttc gtcgggtcga tctcggtcaa ctgggggctg tcgagcgccg
     3721 ctgcgacggc aacgatggtg ccgctgatca tcctcggctt cttcgtccag aagcacatcg
     3781 cggccggtac caccggcggg gcggtcaagg gttgagccca catgcgcacg atctgccgct
     3841 tcagcgccac ccgccggacg accgccgtct atttgtcgac gaccgtcatg tcgaaggcat
     3901 agagatccgg ccggtagcag tggtagccga gctcgaccgg gtggccggat tgatcgaaga
     3961 acacccgctg catggtcagt accggtgccc ccgccttgag cagcaggtgc ttggcctcat
     4021 ccttgcggca gctgcgcgcc ccgatcgtct ggtgcgcgac gcgcagggtc gtgccgcggg
     4081 cccgcatcag ctgatagagg ccgtgcttcc gcatctgttc ggcggtcagg tcgagaaact
     4141 ccgggggaag ataattgtcg agcactgcga acggcacgcc gtcggcagag cgaacccgaa
     4201 ccgcatgcaa gactgtcgtt ccaggcggca gggcgaggct gtcgagaacc tccatcgatg
     4261 gctcgatggc ttcgtgcacg aggattttcg tgctcggcga gcggccggca gcgctcagcg
     4321 cgtcatagag gctggtgagc tcgacattgc ggcgcacctg gccgcgaacc acctgcgtgc
     4381 cgacgcctcg gcgcctgacc agcagcccct ggtcgacaag ctcgcggatc gcccggcgca
     4441 cagtggggcg cgagataccc agatcgttgg cgatctgcag ctcattctcg atgcgcgacc
     4501 cgggcggcag gcgcccggac tggatggcgt cctgcagccg cttggcgatc tggtagtaaa
     4561 gcggtatcgg gctcgagcgg tcgagatcca tgaacagttc ccgggtcgat accgtcatcc
     4621 tcccgctcct tctgctgtta ccggcaagtc cgctgcgtca cgattgttgg cggcaagcaa
     4681 taagacagga caaagttaca agccctgtca tttgtcagct ttggctgacc gcctccgaaa
     4741 ctgcaagagg agatagtctg atgtccaacg ccgcggcgaa cggcgagatg ctggcggtcg
     4801 taaagaccgg acccggatcg gcaaacgtac gtctggagcg tgttccggag ccgagtgccg
     4861 aacccgggat ggcccggttg cgcgtgctgg cctcgggcat ctgcggcacc gacatccaca
     4921 ttgccaggga tgaatacgcc cacgatgcgc cggtggtcat gggccacgaa atcctggggg
     4981 tcgtcgactc ggtgggcgac gacgcggatc gcgccctgct gggcaagcgc gtcgcgtgcg
     5041 agacctattt ctcgacctgt ggcaagtgcg actggtgccg ggccggacgt ccgaacctct
     5101 gtccgaaccg ccgttctatc ggctcgttcg aaaacggcgg ctttgcgcac tacctcgtgg
     5161 tcccggtcag gaacctgcat ccgctgcccg acttcctcga cgagatcgaa ggcgtgctca
     5221 gcgaacccct ggcgtgcgtg acgcagtgcc tgctggatcc ggcagtgatc aacccgggcg
     5281 accgggtgct ggtcaccgga cctggggcga tggggcaact cgccgcgcag gtggccctgg
     5341 cgggcggcgc cgaggtgacc ctggcgggcc tcgaaaagga cgccgagcgg ctggcggtcg
     5401 caagatcgct ggggatcgcc acaacgaccg aggagccgcc ggccgatgtc tatgacgtgg
     5461 tcgtcgagtg ctccggcagc gccgccgcgg caaaggcctg cctgcggtcg gcgcggcgcg
     5521 gcgggcgcta tatccaggtc ggaatttttg gcggagaaat a
//
LOCUS       DATAZA010000082         1946 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3603258, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000082 DATAZA010000000
VERSION     DATAZA010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1946)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1946)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1946
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3603258"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VHZ56_02075"
     CDS             <1..186
                     /locus_tag="VHZ56_02075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEX4296787.1"
                     /translation="PPRVEYQLTELGRTLTDPLDTLWNWAARHMGTVNEARTAYDLLH
                     TAEAEARPERRYAGAAR"
     gene            183..968
                     /gene="aac(3)"
                     /locus_tag="VHZ56_02080"
     CDS             183..968
                     /gene="aac(3)"
                     /locus_tag="VHZ56_02080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016734484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside 3-N-acetyltransferase"
                     /protein_id="HEX4296788.1"
                     /translation="MSGPATRRSLAADFRGIGLAPGDSVLVHAALRRVGRILGGPDML
                     LAALRDATGPGGTILGYTDWQSEDHVDDSLRGDLPAFDPATSRATRDNGFFPELLRTT
                     AGARRSANPGASMAALGGRAEWFTADHALDYGYGPRSPLGRLVEAHGKVLMLGAPLDT
                     MTLLHHAEHLADIPAKRIKHYEAPILVDGKTVWRPFEEFNTSHPVVDGLPEDYFATIV
                     ELFLAEGQGRRGTVGAAASVLVDADAIVPFAVAWLERRFGTTR"
     gene            1065..1670
                     /locus_tag="VHZ56_02085"
     CDS             1065..1670
                     /locus_tag="VHZ56_02085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013897156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296789.1"
                     /translation="MRTVTALFDSYDHATSAVRSLAAYGVAAADVSLVANNVSGDIET
                     PGAEDGAAAGAGVGLVAGGGAGLLAGLGALAIPGIGPVIAGGWLLATAVGALAGAAVG
                     GAAGGLVGALANAGVPEADAHVYAEGVRRGGTLLSVRAADDHAEAVADILHRAEGVDI
                     DARRADYLTEGWTGFDEDATALAEEHIRDYRSSYGLLPPIV"
     gene            complement(1799..1883)
                     /locus_tag="VHZ56_02090"
     tRNA            complement(1799..1883)
                     /locus_tag="VHZ56_02090"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1847..1849),aa:Leu,seq:caa)
BASE COUNT          264 a          731 c          644 g          307 t
ORIGIN      
        1 ccgccgcgcg tcgaatacca gctcaccgaa ctcggccgca ccctgaccga tccgctcgac
       61 accctgtgga actgggcggc gcggcacatg ggcacagtca acgaggcccg caccgcctac
      121 gacctgctgc acaccgccga agccgaagcc cgcccggagc gccgctacgc cggggccgcc
      181 cgctgagcgg tccggcgacg cgtcgcagtc tcgccgcaga ctttcgcggc atcggcctcg
      241 cgccgggcga ctcggtgctc gtccatgccg cgctgcggcg cgtcggccgc atcctcggcg
      301 gccccgatat gctgctcgcg gccctgcgcg acgcgaccgg tcccggcggt accatcctcg
      361 gctacaccga ctggcagtct gaggatcacg tcgacgattc ccttcgcggc gacttgcccg
      421 ccttcgatcc cgcgacctcg cgcgccaccc gcgacaacgg cttttttccc gagttgctcc
      481 gcaccaccgc cggcgcccgg cggagcgcca atcccggagc ctcgatggcg gcgctcgggg
      541 gccgcgccga gtggttcacc gccgaccatg cgctcgacta tggctacggt ccccgctcgc
      601 cgctcggccg cctcgtcgag gcccatggca aggtgctgat gctcggcgcc ccgctcgaca
      661 ccatgacgct gctgcatcat gccgagcacc tcgccgatat cccggccaag cgcatcaagc
      721 actacgaggc ccccatcctc gtcgacggca agacggtctg gcggccgttc gaggagttca
      781 acacctctca cccggtggtc gacggcctgc ccgaggacta tttcgccacg atcgtcgaac
      841 tattcctcgc cgagggccag ggccgtcgcg gcaccgtcgg cgcagccgcc tcggtgctgg
      901 tggacgccga tgccatcgtg ccgttcgccg tcgcctggct ggaacggcgt ttcggcacga
      961 cccgctgaag gcagcctcgc cttgcgggga acggctgcct ttttcgggag ttgaaccgat
     1021 acaggcacca ctgcgcccca tgtcctttcc cggaggcttg agccatgcgc accgtcaccg
     1081 cgctttttga cagttatgac cacgcgacct cggccgtccg ctcgctcgcg gcatatggcg
     1141 ttgctgccgc cgatgtctcg ctcgtcgcta acaacgtgtc cggcgacatc gaaacgcctg
     1201 gcgccgagga cggcgccgcg gccggagctg gagtgggcct cgtcgccggc ggcggggcgg
     1261 ggctgcttgc cggcctggga gcccttgcca ttcccggcat cggcccggtg atcgccggcg
     1321 gctggctgct ggccactgct gtcggtgccc tcgccggcgc tgccgtcggc ggcgcggccg
     1381 gcggtttggt cggcgccctc gccaatgccg gcgtgcccga ggccgacgcc cacgtctatg
     1441 ccgagggcgt gcgccgcggc ggcaccctgc tcagcgtccg cgccgcggac gaccacgccg
     1501 aggccgtcgc cgatatcctc catcgggccg agggggtcga tatcgacgcg cgccgggccg
     1561 actacctgac cgagggctgg accggctttg acgaagacgc gaccgctttg gccgaagagc
     1621 atatccgcga ttaccgcagt tcctacggcc tgctgccgcc gatcgtctga tcgcggctga
     1681 accttctgcg ccgcccggga gttaagagaa tgccggctgt gcgggccggc gaacgcatga
     1741 tcgaggcttc gcccttccac cggcggagcc tcatcgcttt cggggtgtga gagaaggctg
     1801 gtgcccccgg tcgggatcga accgacactc ctttcggaac cggattttga gtccggcgcg
     1861 tctaccaatt ccaccacagg ggcccgtggg agtgcggcgg gcttaagcaa atccggcggc
     1921 agcgtcaacc ggcgggcgcg ggcacc
//
LOCUS       DATAZA010000083         2674 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3139469, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000083 DATAZA010000000
VERSION     DATAZA010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2674
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3139469"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..983)
                     /locus_tag="VHZ56_02095"
     CDS             complement(<1..983)
                     /locus_tag="VHZ56_02095"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEX4296790.1"
                     /translation="MPDLLLELFSEEIPARFQRRAAEDLKKAVTDALVEAGLLYDGAR
                     AFVTPRRLALAVSGIPERSPDLKEEKKGPRVGAPQPAIDGFLKSAGLASIAEAKIVSD
                     PKKGDSYVAIIEKKGADAARLLADLLPRIVGNFPWAKSMQWGHGGLTWVRPIRAITAT
                     FGRDTEEPAVIPFTVGTVAAGQVTYGHRFLAPGPITVRRFDDYVTALDRAKVVLDLDR
                     RKDIIRADAEHLAFAQGLAVIADEGLLEEVAGLVEWPVVMMGSFDGAFLEVPEEVIIA
                     TIRANQKCFCLRDARGAFPSEVDTGSRFGNATKEKSGRLANKFLLTANNLAT"
     gene            complement(1057..>2674)
                     /locus_tag="VHZ56_02100"
     CDS             complement(1057..>2674)
                     /locus_tag="VHZ56_02100"
                     /inference="COORDINATES: protein motif:HMM:NF044955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2207 domain-containing protein"
                     /protein_id="HEX4296791.1"
                     /translation="LESLGNGFRRIRIGDADTLVDPGAHTYVIHYAMTRMARFFADHD
                     ELFWNATGNYWIFPIVKAEATLNLPPGAVVSRTVGYTGAPGSTEQAVTVERTSDTSVT
                     FRTTRELAPGEGLSVDAAFQKGIVAEPQGLTAAGDWLSDHRELVFPAIAVFIVLLYNF
                     LAWSAVGRDPRKGPIIPLFHPPADLSPAQVHFVEHMGFRQNGWPAFTASIFDLGVKGL
                     VRIDKATGPMTVTSTGDAKGPLPIGEQGIYDLVHANGSVVVDKTDGPALDRKRNDMVT
                     AIKAQSGESYFRNNVPYTLGGVGLAIVLLGALVWLDVLQPAYLVVAVVAAIVIGIFVG
                     VLARRGAGGIVSTLFGFIWVAIIAANIFGSGLSFAGGLRLDTGLIAAISIIVIEIVFA
                     VLMRAPTVAGRKLMDQIDGFRMYLETAEKNRLNFVAEPQMTVPRFEAILPFAIALGVE
                     KPWSQRFEADLARNAVAGATVGYAPLWYVGPNWSSSSSGFSNAVSSVASGMSAAMIAA
                     QPSSSSGSGFSGGGGGGSGGGGGGGGGGGW"
BASE COUNT          429 a          807 c         1033 g          405 t
ORIGIN      
        1 gtggcgaggt tgttggcggt gagcaggaac ttgttcgcga gccttccgga cttttctttg
       61 gtcgcatttc cgaatcgcga accggtatcc acttcgcttg gaaatgctcc cctggcgtcg
      121 cgcaggcaga agcatttctg gttggcgcgg atggtggcga tgatgacttc ctcgggcacc
      181 tcgaggaagg cgccgtcgaa cgagcccatc atcaccaccg gccattcgac gaggccggcg
      241 acctcctcga gcaggccctc gtcggcgatg acggccagcc cctgggcgaa agcgaggtgc
      301 tcggcgtcgg cgcggatgat gtccttgcgg cgatcgaggt cgaggacgac cttcgcccgg
      361 tcgagggcgg tcacgtagtc gtcgaagcgg cgcacggtga tggggccggg cgcgaggaag
      421 cggtggccgt aggtgacctg cccggcggcg acggtgccga cggtgaaggg gatgacggcc
      481 ggctcctcgg tgtcgcggcc gaaggtggcg gtgatggcgc ggatggggcg cacccaggtg
      541 aggccgccat ggccccactg catcgacttg gcccagggga aattgccgac gatgcgcggc
      601 aggagatcgg cgagcagtct tgccgcgtcg gcgccctttt tctcgatgat ggcgacgtag
      661 gagtccccct ttttggggtc ggaaacgatc ttcgcctcgg cgatcgaagc caggccggcg
      721 gacttgagga agccgtcgat ggcgggctgc ggggcgccga cgcgcggacc cttcttttct
      781 tccttgaggt cgggcgagcg ctccgggatg ccggagaccg ccagggcgag gcggcgcggg
      841 gtgacgaagg ccctggcgcc gtcgtagagc aggccggctt cgaccagcgc gtcggtgacg
      901 gccttcttca aatcctcggc ggcgcggcgc tggaagcgcg ccgggatttc ctcggaaaac
      961 agttcgagca gcaggtcggg catgcggcgg tcctcggggc gccggagggt tagcaatccg
     1021 ggccgggatt gtccaacccg atgcgcgccg ccggggctac cagccgccgc ctccacctcc
     1081 gccgccaccg ccgccggagc cgccgcctcc gccgccggaa aagccggagc cggaggacga
     1141 ggagggctgg gccgcgatca tggcggcgct catgccgctg gcgaccgagc tgacggcgtt
     1201 ggaaaagccg gaggacgagc tggaccagtt cgggccgacg taccagagcg gggcgtagcc
     1261 aacggtggcg ccggcgacgg cgttgcgggc gaggtccgcc tcgaagcgct gcgaccacgg
     1321 cttttcgacg ccgagggcga tggcgaaggg caggatggcc tcgaagcgcg gcacggtcat
     1381 ctgcggctcg gcgacgaagt tgagccggtt tttctcggcg gtctcgaggt acatcctgaa
     1441 gccgtcgatc tggtccatca gcttgcggcc ggcgacggtc ggggcgcgca tcaggacggc
     1501 gaagacgatc tcgatgacga tgatcgagat cgccgcgatg aggccggtgt cgagccgcag
     1561 gccaccggcg aaggagaggc cggagccgaa gatgttggcg gcgatgatgg ctacccagat
     1621 gaagccgaag agggtgctga cgatgccacc ggcgccacgg cgcgccagga cgccgacgaa
     1681 gatgccgatg acgatggcgg cgacgacggc gaccacgagg taggccggct gcagcacgtc
     1741 gagccagacg agagcgccca gcagcacgat ggcgagaccg acgccgccga gggtgtaggg
     1801 gacgttgttg cggaaatagc tctcgccgct ctgcgccttg atggcggtga ccatgtcgtt
     1861 gcgcttgcgg tcgagggcgg ggccgtcggt cttgtcgacg acgacgctgc cattggcgtg
     1921 aacgaggtcg tagatgccct gctcgccgat gggcagcggg cccttggcgt cgccggtcga
     1981 ggtgacggtc atcgggccgg tggccttgtc gatcctgacc agccccttga cgccgaggtc
     2041 gaagatcgag gcggtgaagg cgggccagcc gttctggcgg aagcccatgt gctcgacgaa
     2101 atgcacctgc gccggcgaca ggtcggcggg cgggtggaac agcgggatga tcggaccctt
     2161 gcgcgggtcg cggccgacgg cgctccaggc gaggaaatta tagagcagca cgatgaagac
     2221 ggcgatcgcc ggaaacacca gctcgcgatg gtcggacagc cagtcgccgg cggcggtgag
     2281 gccctgcggt tcggcgacga tgcccttctg gaacgcggca tcgacggaga ggccctcccc
     2341 tggcgccagc tcgcgcgtgg tgcggaacgt gaccgaggtg tcggaagtgc gctcgacggt
     2401 gaccgcctgc tcggtggagc ccggcgcacc ggtgtagccg acggtccgcg agaccacggc
     2461 gccgggcggc aggttgagcg tcgcctcggc cttgacgatg gggaagatcc agtagttgcc
     2521 ggtggcgttc caaaacagct cgtcgtggtc ggcgaagaag cgcgccatcc gcgtcatggc
     2581 gtagtggatg acgtaggtgt gggcgcccgg atcgacgagg gtgtcggcgt cgccgatgcg
     2641 gatgcggcga aagccgttgc caaggctttc gagc
//
LOCUS       DATAZA010000084         4156 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1398749, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000084 DATAZA010000000
VERSION     DATAZA010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4156
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1398749"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..478
                     /locus_tag="VHZ56_02105"
     CDS             <1..478
                     /locus_tag="VHZ56_02105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HEX4296792.1"
                     /translation="KPEWGGVTRFTWNRGYLTLEGGELHVHTATDADAWTGNAYLRDQ
                     RVTAELTPLAGGSHLVSARVQGTARFYAGGFESGEAVIVRQDHGATVLARTPFVAEPG
                     RRYRLELEVLGDRLALSIDGKPLLTATDNLYRYGMAGVRMASAGRMSVARLTVEDF"
     gene            636..1811
                     /locus_tag="VHZ56_02110"
     CDS             636..1811
                     /locus_tag="VHZ56_02110"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018430786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX4296793.1"
                     /translation="MTDPIHFDPAAEGPLRGIRVIDLSRLVAGNMLSLQLGDFGADVI
                     KVEPPQGDPLREWREDGHSLFWKAYGRNKRSLVLNLREAEDMAALRTLLQSADVFIEN
                     FRPGTLEQMGLAPADLLAANPDLVIVRVSGFGQTGPYAQFPGFGTIVEGMSGFAHRSG
                     FPDREPLLPPLALADMIAGIYGASATVTALLARDRGLARGQVIDLSLLEPMVSVLGPE
                     AAIYRTTGRVKERTGSASNTSSPRNVYRCRDGRYVALSGSTPAVARRVFEIIGRPEMN
                     DNPRFATNTERVRNRELVDEAVGGWFARHDQEDALRIMRDSGATVGPIYSAADAAADP
                     HFAGRGVIVDVDDAEFGTLPVHNILPRLSATPGVWRRPAPQLGEHTAEILAEIGRTR"
     gene            1811..2593
                     /locus_tag="VHZ56_02115"
     CDS             1811..2593
                     /locus_tag="VHZ56_02115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018430785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX4296794.1"
                     /translation="MPRSLLYVPAHSERFLAKAHERGADAIILDLEDAVPEADKDRAR
                     AGLGEAVRSAGRNGAEIHVRINAGERQRADAEAAARAGASGIVVAKAALPAVEVLAGL
                     GVPLIPMLEDPGAILDARDFARNPAVIALMVGGEDLATALGATPSPEVLRTPKLLVHY
                     AAKAERKLSFGLLRSIADYADLAALDAAAREARQHGFDGASCVHPSAVAILNAAFAPT
                     ADELAWAGRVLAAAAVHAGAFTVDGRMVDAPVIARARSLLGR"
     gene            2621..3238
                     /locus_tag="VHZ56_02120"
     CDS             2621..3238
                     /locus_tag="VHZ56_02120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711194.1"
                     /note="Members of this highly hydrophobic protein
                     family,regularly are found preceded by the yybP-ykoY
                     manganese riboswitch (see RF00080). A metal cation
                     transport function is proposed; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YjbE family putative metal transport protein"
                     /protein_id="HEX4296795.1"
                     /translation="MHDLLAPVLTFLQVVFIDLALAGDNALVVGIAAAGLPAAQRRKA
                     IFVGIAAATLLRVTLAGFATMILAVVGLLLAGGILLLWVCWKLYRELSAPEPAEAAGD
                     AATPARTKTLSQAVLQIVAADVSMSLDNVLAVAGAAHDHPIVMVLGLTLSVVLMGIAA
                     SWIAKLLSHWRWIGYVGLFVIAAVAGNMIYHGALDLAATLRALHG"
     gene            complement(3251..>4156)
                     /locus_tag="VHZ56_02125"
     CDS             complement(3251..>4156)
                     /locus_tag="VHZ56_02125"
                     /inference="COORDINATES: protein motif:HMM:NF013315.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HEX4296796.1"
                     /translation="FPVHGLRRLSEALSRRQFLVASAAVAASGALSGAAWAAVPKPYD
                     WTALPPTDTRANFISWMAANRGEDPTYLGPRFDRYQWMVNVRDIFADDNKRGFLMTPR
                     EEFCLKANLPRAYDIDFLDIGYGVTISGPGLVGRMTSSLGIKKGDKVLEIGTGSGYQS
                     AFLSNVTDKVWTIEIIAPLADRTRGIYDGLIGRGYTEYQAISTKQADGYYGWEEAAPF
                     DKIIVTCGIDHVPPPLLEQLVPGGVMVIPIGPPGAQHVLKVVKRVADDGTMAVDRSDI
                     YNGRVIPFVPFTSLVGDVVKGTHNG"
BASE COUNT          581 a         1508 c         1417 g          650 t
ORIGIN      
        1 aaagccggaa tggggcggcg tcacccgctt cacctggaac cgcggctacc tgacgctcga
       61 gggcggcgag ctccacgtcc ataccgcgac cgacgccgac gcctggaccg gcaacgccta
      121 cctccgcgac cagcgggtga cagcagagct gacgccgctg gccggcggct cacacctcgt
      181 ctcggcccgc gtacagggca ccgcgcggtt ctacgccggc ggcttcgaga gcggcgaggc
      241 ggtgatcgtc cgtcaggacc acggcgccac tgtcctcgct cggacgccat ttgtagcgga
      301 gcccggccga cgctaccggc tcgaactcga agtcctcggc gaccggctgg ctctgtcgat
      361 cgacggcaaa ccgctcctca ccgcgaccga caacctctat cgctacggca tggccggcgt
      421 gcgcatggcg tctgcggggc ggatgagcgt ggcgcggctg acggtggaag acttctgatg
      481 cggtgggtgc gactaatccc ctcgccaatc ctccccgcac ggggaaggac gctccttcgt
      541 tccattggcg agatggtgct cgagccaccg accggcatct ccccccttgt gggggagtct
      601 gggacggggg gcgccgctgc cgaagcggac gacacatgac agaccccatc cacttcgatc
      661 ccgccgccga ggggccgctc cgcggcatcc gcgtcattga cctcagccgc ctcgttgccg
      721 gcaacatgct gtcgctgcaa ctgggggact tcggcgccga cgtcatcaag gtcgagccgc
      781 cgcagggcga tccgctgcgc gagtggcgcg aggacggcca ttcgctgttc tggaaggcct
      841 atggccgcaa caagcggtcg ctggttctca atctgcgcga agccgaggac atggcggcgc
      901 tcagaacgct gctccagtcc gccgacgtct tcatcgagaa tttccggccc ggcacgctcg
      961 agcagatggg cctcgcgccc gccgacctgc tcgctgccaa tcccgacctc gtcatcgttc
     1021 gcgtctccgg cttcgggcag accggaccct acgcgcagtt tcccggcttc ggcaccatcg
     1081 tcgaggggat gagcggcttc gcccaccgca gcggcttccc cgaccgcgag ccgttgctgc
     1141 cgccgctggc gctcgccgac atgattgccg gcatctacgg cgcctcggcc accgtcaccg
     1201 cgctgctcgc gcgcgaccgc ggcctcgccc gcggccaggt gatcgacctc tcgctgctcg
     1261 agccgatggt ttcggtgctc ggcccggagg ccgcgatcta ccgcaccacc gggcgcgtca
     1321 aggaacgcac cggcagcgcc tccaacacgt cctcgccgcg caacgtctat cgctgccgcg
     1381 acggcaggta cgtcgcgctg tccggatcga cgccggccgt cgccagacgc gtcttcgaga
     1441 tcatcggccg gcccgagatg aacgacaatc cacgctttgc caccaatacc gagcgcgtcc
     1501 gcaatcgcga gctggtcgat gaagccgtgg gtggctggtt cgcgcggcac gaccaggagg
     1561 acgcgctgcg catcatgcgc gactccggcg cgacggtcgg gccgatctat tccgcggcgg
     1621 acgcggccgc cgacccgcac ttcgccggtc gcggcgtcat cgtcgatgtc gacgacgccg
     1681 agttcggcac gctgccggtg cacaacatcc tgccgcggct ctcggccacc cccggcgtct
     1741 ggcgccggcc ggcgccccag ctcggcgaac atacggcgga gatcctcgcc gagatcggca
     1801 ggacccgctg atgccgcgct cgctgcttta cgtcccggcg cattccgaac gcttcctcgc
     1861 gaaagcgcac gagcgcggcg ccgacgccat catcctcgat ctcgaggatg cggtgccgga
     1921 ggctgacaag gatcgggccc gcgccgggct cggcgaagcg gtgcgttcgg ccggccgcaa
     1981 cggcgccgaa atccacgtgc gcatcaacgc cggcgagcgg cagcgcgccg atgccgaagc
     2041 ggcggcgcgg gcaggggcca gcggcatcgt cgtcgccaag gcggcgctgc cggccgtcga
     2101 ggtgctcgcc gggctgggcg tgccgctgat cccgatgctg gaggaccccg gcgccatcct
     2161 cgacgcccgc gacttcgccc gcaatcctgc cgttatcgcg ctgatggtgg gcggcgaaga
     2221 cctcgcgacg gcgctggggg cgacgcccag cccggaggtg ctgcgcacgc caaagctgct
     2281 ggtccactat gccgccaagg ccgaacgcaa gctgagcttc gggctgctgc ggtccatcgc
     2341 cgactatgcc gacctcgctg cgctcgacgc cgccgcgcgc gaggcgcgcc agcacggctt
     2401 cgatggcgcg agctgcgtgc atccctccgc cgtcgccatc ctcaacgcgg cgttcgcacc
     2461 caccgccgac gaactggcgt gggccggccg cgtcctcgct gccgccgctg tccacgccgg
     2521 cgccttcacc gtcgacggcc gcatggtgga tgcgccggtg atcgcccgcg cccgatcgct
     2581 gctgggtcgc tgacgcatgt tcccgttcgg cctgccggca atgcacgatc tgctcgcacc
     2641 ggtgctgacg ttcctgcagg tggtgttcat cgacctggcg ctcgccggcg acaacgccct
     2701 cgtcgtcggc atcgccgccg ccgggctgcc ggccgcccag cgccgcaagg ccatcttcgt
     2761 cggcatcgcc gccgcgaccc tgctgcgtgt caccctcgcc ggtttcgcga cgatgatcct
     2821 cgcggtggtc gggctgctgc tcgccggcgg catcctgctg ctgtgggtgt gctggaagct
     2881 ctatcgcgag ctcagcgcgc ccgaaccggc ggaggcggcc ggcgatgcgg cgacgccggc
     2941 gcgaaccaag accctcagcc aggccgtgct gcagatcgtc gccgccgatg tgtcgatgtc
     3001 gctcgacaac gtgctcgcgg tggccggcgc cgcccacgac cacccgatcg tcatggtgct
     3061 ggggctgacg ttgtcggtgg tgctgatggg catcgctgcg tcgtggatcg cgaagctgct
     3121 ctcgcactgg cgctggatcg gctatgtcgg gctgttcgtc atcgccgccg tcgccggcaa
     3181 catgatctac cacggcgccc tcgaccttgc cgccacgctg cgggcgctgc acggttaggg
     3241 cagggcggcc tcagccgttg tgcgtgccct tgacgacgtc gccgacgagg ctggtgaacg
     3301 gcacgaacgg gatcacacgg ccgttgtaga tgtcggagcg gtcgaccgcc atggtgccgt
     3361 cgtcggcgac gcgcttgacc accttgagca cgtgctgggc gcccggcggc ccgatcggga
     3421 tcaccatgac gccgcccggc accagctgct cgagcagcgg cggcggcacg tggtcgatgc
     3481 cacaggtgac gatgatcttg tcgaacggcg ccgcctcttc ccagccgtag tagccgtcgg
     3541 cctgcttggt gctgatcgcc tggtattcgg tgtagccgcg cccgatcagc ccgtcataga
     3601 tgccgcgcgt ccggtcggcg agcggcgcga tgatctcgat cgtccatacc ttgtcggtga
     3661 cgttggagag gaacgccgac tggtagcccg agccggtgcc gatctcgagc accttgtcgc
     3721 ctttcttgat gccgagcgag ctggtcatcc ggccgaccag ccccgggccc gaaatggtca
     3781 ccccgtagcc gatgtcgagg aagtcgatgt cgtaggcccg cggcaggttg gccttgaggc
     3841 agaattcctc gcgcggcgtc atcaggaaac cgcgcttgtt gtcgtcggcg aagatgtcgc
     3901 ggacgttgac catccactgg tagcggtcga agcgcggccc gagataggtc gggtcctcgc
     3961 cgcggttggc cgccatccag ctgatgaagt tggcccgcgt gtcggtcggc ggcagcgccg
     4021 tccagtcgta cggcttgggc accgcggccc aggccgcacc gctgagcgcg ccgctggcgg
     4081 cgaccgccgc cgaggccacg aggaactgcc ggcgggacaa cgcttcgctc aggcggcgca
     4141 gcccgtggac gggaaa
//
LOCUS       DATAZA010000085         2827 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_470209, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000085 DATAZA010000000
VERSION     DATAZA010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2827
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_470209"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            79..900
                     /locus_tag="VHZ56_02130"
     CDS             79..900
                     /locus_tag="VHZ56_02130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004128072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX4296797.1"
                     /translation="MTFADDDLTLLEAHGLPPLPPTDASGHVVHDNARIWHASFGHGP
                     PVILLHGGLGHSGNWARQVPALVEAGYRAVVIDSRGHGRSSRDERPYSYVLMAADVRA
                     VMDTLGIERAVFVGWSDGADTALVLAEETPERVAGVWFFACNVDPSGTKEFVFTPVIG
                     RIYEQHVRDYARLSATPAEFEAFRDAVGLMQRTQPNYGAADLARLRVPFLSVLGEHDE
                     FIRREHAEYIARSIPGASFLLLPEVSHFAPLQRPDAFNRAMLDFVRQVAPVPTGQ"
     gene            complement(919..1605)
                     /locus_tag="VHZ56_02135"
     CDS             complement(919..1605)
                     /locus_tag="VHZ56_02135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296798.1"
                     /translation="MSDTVGDVAARLRFDQQKARVQVQVDPAVYAGYVGAYRFVDDGT
                     YYFVETRDGRLFARILGQTESEIFPESQTRFFMKGAPVQITFLGDGRGAVNSLAYQAN
                     GADVRGVRVEPAEAAAAEADLERRRREKIPHPQSEEVLRRIIEAHQRGAPSYAAMTPV
                     LASALRQQRQTLQSTLQIAGKLRTISFRGVGQSGLDVYDTVFERSWLEWAIGVGSNGW
                     LIAFTMRPSL"
     gene            1787..2677
                     /locus_tag="VHZ56_02140"
     CDS             1787..2677
                     /locus_tag="VHZ56_02140"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX4296799.1"
                     /translation="MPLRYWGLIIGLGAIWGCSFLFNAILIREISPLWVSAGRVTIGA
                     VICWAFFFAMRRKAPTDWHIYAQLVVLGVLNYAIPFALFPWSEEHLASGIVGVINGMT
                     PMTTVIVSQLWPGGEKASWNKSVGVLVGLAGAVLLASPSFSDGAASQVLAYAAALGAT
                     LCYALTLNYARRFKAVDSTVVASSSLTAAAVIMIPVALLFSGVPVITRPETWGALFGI
                     GIFSTSFSFLLVYWLLPKVGATNLSLNTFITPISAILLGVLVLHEGFLPVHVAGILVI
                     FVGLIFIDGRLVKRWRRAPA"
BASE COUNT          405 a         1001 c          920 g          501 t
ORIGIN      
        1 cccagatgcg aaaaatcggc tggatcaaat gacaccggcc ggtgtcgaat cccggccggt
       61 ccgtacgacc agtcgatcat gaccttcgcc gatgacgacc tcactctgct ggaagcccac
      121 ggactgccgc cgctgccgcc caccgatgcc agcggccatg tggtgcatga caacgcccgc
      181 atctggcatg cgagcttcgg ccatgggccg ccggtgatcc tgctccatgg cgggctcggg
      241 cattccggca actgggcccg ccaggtgccg gcgctggtcg aggccggcta tcgcgcggtg
      301 gtcatcgaca gtcgcggcca cggccgctcg agccgcgacg agcggcccta cagctacgtc
      361 ctgatggcgg ccgacgtgcg tgctgtgatg gatacgctcg gcatcgagcg tgccgtcttt
      421 gtcggctgga gcgacggcgc cgacaccgcg ctcgtcctcg cggaggagac gccggagcgg
      481 gtggccggcg tctggttttt tgcctgtaac gtcgacccct ccggcacgaa agagttcgtc
      541 ttcacaccgg tcatcgggcg catctacgaa cagcatgtcc gcgactacgc caggctctcg
      601 gcgacgccgg cggaattcga ggcgtttcgc gacgccgtcg ggctgatgca gcggacgcag
      661 ccgaactacg gcgcggcgga cctcgcgcgc ctccgcgtac cgttcctgag cgtcctcggc
      721 gagcacgacg agttcatccg gcgcgagcac gccgaataca ttgcccgctc gatcccgggc
      781 gccagcttcc tgctgctccc cgaggtcagc catttcgcgc cgctgcagcg gccggatgcc
      841 ttcaaccggg cgatgctcga tttcgtccga caggtggccc ctgtcccgac cgggcagtga
      901 ccggggcgtc gcggggagct agagcgacgg ccgcatggtg aaggcgatca gccagccatt
      961 gctgccgacg ccgatggccc attccagcca gctccgctcg aacaccgtgt cgtagacgtc
     1021 gaggccggac tggccgacgc cgcgaaagct gatcgtgcgc agcttgccgg ctatctgcag
     1081 cgtcgactgc agggtctgcc gctgctggcg cagggcgctg gcgagcaccg gcgtcatcgc
     1141 cgcatagctc ggtgcgccac gctggtgcgc ctcgatgatc cggcgcaaca cttcttcgct
     1201 ctgcgggtgt ggaatcttct cgcggcgccg ccgctcgagg tcggcctcgg ccgccgccgc
     1261 ctcggccggc tcgacgcgta cgccccggac atcggcgccg ttcgcctggt aggcgaggct
     1321 gttcaccgcc cccctgccgt ccccgaggaa ggtgatctgc accggcgctc ccttcatgaa
     1381 gaaccgcgtc tggctctcgg gaaaaatctc gctctcggtc tgcccgagga tgcgggcgaa
     1441 cagccggccg tcgcgcgtct ccacgaaata ataggtgccg tcgtcgacga agcggtaggc
     1501 tccgacatat ccggcgtaca ccgccggatc gacctgcacc tgcacacgcg ctttctgctg
     1561 gtcgaagcgc aggcgggcgg ccacatcgcc gacggtgtcg ctcatctcgg tctccttgcg
     1621 atcctggtca cgccataagc cggttggcag gtcgacgcaa ccgcggcggc ggcatcttgc
     1681 cggcggtatg gccccggcca tcagcgcggt tgatcgcagc catcgtcaaa atcggttcga
     1741 cccgactccg cgccccctct agtatgccca ccaagggaga acctcgatgc cgttgcgata
     1801 ttgggggctg atcatcgggc tcggcgccat ctggggctgc tcgttcctgt tcaacgccat
     1861 cctgatccgt gagatctcgc cgctctgggt gtcggccggc cgggtcacca tcggggccgt
     1921 catctgctgg gcgttctttt tcgcgatgcg gcgcaaggca ccgaccgact ggcatatcta
     1981 cgcccaactg gtcgtcctcg gagtgctgaa ctacgccatc ccgttcgcgc tgttcccgtg
     2041 gtccgaggag cacctggcga gcggcatcgt cggggtgatc aacggcatga cgccgatgac
     2101 cacggtgatc gtcagccagc tctggccggg tggcgagaag gccagctgga acaaatcggt
     2161 gggcgtgctc gtcggacttg ccggcgccgt gctgctggcc tcgccctcgt tcagcgacgg
     2221 cgccgccagc caggtgctgg cctatgccgc cgcgctcggg gcgaccctct gctacgcgtt
     2281 gacgctcaac tacgcccgcc gcttcaaggc ggtggattcc accgtcgtcg cctccagctc
     2341 gctcaccgcc gccgcggtca tcatgatccc ggtggcgctg ctgttcagcg gcgtgccggt
     2401 catcacccgg cccgagacct ggggcgcgct gttcggcatc ggcatcttct cgacgagctt
     2461 cagcttcctg ctggtctact ggctgctgcc gaaagtcggg gcgaccaatc tgtcgctcaa
     2521 caccttcatc acgccgatct cggcgatcct gctcggcgtg ctggtcctgc acgagggctt
     2581 cctgccggtg cacgtcgccg gcatcctggt gatcttcgtc ggcctgatct tcatcgacgg
     2641 gcgactggtc aaacgctggc ggcgcgcgcc ggcctgactg cctgcgggaa cgccagagcc
     2701 agccggccgt tctgtgatgg tcacagagga gaccggtcat ggcccgcaac ggcgatcccc
     2761 accccgaacc cgacgatcct gctaccatgc ccgcgccgct gttcccgccc ggcgcgggtg
     2821 gcgttcg
//
LOCUS       DATAZA010000086         1535 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3256039, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000086 DATAZA010000000
VERSION     DATAZA010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3256039"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..747)
                     /locus_tag="VHZ56_02145"
     CDS             complement(<1..747)
                     /locus_tag="VHZ56_02145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004115786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein"
                     /protein_id="HEX4296800.1"
                     /translation="MSDAFPIVSLRSFETSGSAQRKSFAGEVDGICRRTGFLAIADHG
                     VPQEVIDGAWNKAKAFFDQPVEVKQRAKAPYAGYPYGYLGPNSEALAASRGVSTPPDL
                     KESFNGGPLTVPPGLTDKEALSFCYAETIWPDGPAGFKRAWRAYYGAMEDLAARIMRL
                     FAVALDLPEDHFASVIDHPISALRALNYPEQSVAPQPGQLRAGAHSDYGSLTILLPQA
                     GSRGLQIQRGAEWIDVPPVPGAFIINIGDLM"
     gene            908..1414
                     /locus_tag="VHZ56_02150"
     CDS             908..1414
                     /locus_tag="VHZ56_02150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296801.1"
                     /translation="MSTTIRLHQPLAVLLALGAIAVTSSAALAESRDFGPHTRAQIDT
                     ICDTAHGQRTLGPAVATWGCNGTHFAIACKLSGKTCIIDLFGIVTDGTIASASPPSAG
                     SGDTLNPGTGNPPPGTGGGGVYAGPARVDTSGLGLSQSGGSGGDTLTGVNGGGGDHGA
                     GLQPLPGH"
BASE COUNT          240 a          603 c          476 g          216 t
ORIGIN      
        1 catcaggtcg ccgatgttga tgatgaacgc ccccggcact ggtggaacat cgatccactc
       61 ggccccgcgc tggatctgca gccccctgct gccggcctgc ggcaacagga tcgtcaggct
      121 gccatagtcc gaatgcgctc cggcccgcag ctgcccgggc tgcggcgcca cagactgctc
      181 gggatagttg agcgcccgca acgcgctgat cggatggtcg atgacgctgg caaaatggtc
      241 ctcgggcagg tccagcgcca ccgcgaacag ccgcatgatc cgcgccgcca gatcctccat
      301 cgcgccgtag tacgcccgcc acgcccgctt gaagccggcc ggcccgtccg gccagatcgt
      361 ctccgcgtag caaaagctca gcgcttcctt gtcggtgagc cccggcggca cggtgagcgg
      421 gccgccgttg aaactttcct tcaggtcggg tggggtcgaa accccgcgcg aggccgccag
      481 cgcctccgaa tttggcccga gatagccgta cgggtacccc gcataagggg ccttcgcccg
      541 ctgcttgacc tcgaccggct ggtcgaagaa cgccttcgcc ttgttccagg cgccgtcgat
      601 cacctcctgc ggcaccccat gatcggcgat cgccaggaac ccggtccgcc ggcagatgcc
      661 gtcgacctcg ccggcgaacg acttgcgctg cgcactcccg gaagtctcga agctgcggag
      721 gctgacaatc ggaaaggcgt cggacacggc aggtccctca aaatactggc gccgcccact
      781 gtgcagcatc ggccatcggt gcgccacccg ctggcgaggc ccgcaagctg aagccgccgt
      841 tcatcgcgcc gtcagccgcg atgcgctctc ctcacgtcca tcagatgccg ctccggagga
      901 gaccacgatg tccaccacca tccgcctgca ccagccgctc gccgtcctgc tggccctcgg
      961 cgccatcgcc gtcacctcca gcgccgccct cgccgagagc cgcgatttcg ggccgcacac
     1021 ccgggcccag atcgacacca tctgcgacac cgcgcacggc cagcggacct tgggcccggc
     1081 ggtcgcgaca tggggctgca acggcacgca tttcgccatc gcctgcaagc tgtccggcaa
     1141 gacttgcatc atcgacctct tcggcatcgt caccgacggc accatcgcca gcgcctcgcc
     1201 cccgtccgca ggcagcggcg acaccctcaa ccccggcacc ggcaatccgc cgcccggcac
     1261 tggcggtggc ggcgtctacg ccggccccgc ccgcgtcgac accagcggcc tgggcctgag
     1321 ccagtccggc ggcagcggcg gcgacacgct caccggcgtc aacggcggcg gcggcgacca
     1381 tggcgctggc ctgcagccac tcccgggcca ctgaggcgcc gcttcccggc cggcgcccgg
     1441 cgtggcaggc tcgccgaaaa gggagtccgc catgccgccg acgatgtcgc tcgatcacgt
     1501 ctcgctgctc gtccgcagcc tcgagaagag caccc
//
LOCUS       DATAZA010000087         6856 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_122404, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000087 DATAZA010000000
VERSION     DATAZA010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6856
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122404"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..642)
                     /locus_tag="VHZ56_02155"
     CDS             complement(<1..642)
                     /locus_tag="VHZ56_02155"
                     /inference="COORDINATES: protein motif:HMM:NF015655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamine synthetase]
                     adenylyltransferase/[glutamine
                     synthetase]-adenylyl-L-tyrosine phosphorylase"
                     /protein_id="HEX4296802.1"
                     /translation="MPIPLDRLLAASPYLRELEGRHRTWLATAVPAADAALAAELAEL
                     GAAAGVAADEEAIGTRMRQAKGRIALLAAAAETGGLWSTQQATAALSDLADTALDAGL
                     AVLLRRAHAKGDFLAEPAPGRSGLALFALGKHGGRELNYSSDIDIVAFFDRDAGGLAD
                     PDEATKTYSRIVQRLAALLQDRVGGDYVFRTDLRLRPDPGSTPVALSVDAALAY"
     gene            784..1428
                     /locus_tag="VHZ56_02160"
     CDS             784..1428
                     /locus_tag="VHZ56_02160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296803.1"
                     /translation="MRFALASIALLVPLAAAAPASAAELSGMGADLFGNYFHFGQPNL
                     QKPPVRGMTAGGVRIDLQHTKLSTLRAAFGGTIQTEGSEGSLASWLCYHTNGSKTEPA
                     ANTWFISNILGGGEFVMIVAVEADDSTPDDCGPAPARFSLPKMGIPGLGESSSALRNA
                     LGFSGGSKITYRADVPAADGLGTADNAQYLAYVLSGGVIAAYGVGETSVNSPKN"
     gene            complement(1433..2821)
                     /locus_tag="VHZ56_02165"
     CDS             complement(1433..2821)
                     /locus_tag="VHZ56_02165"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX4296804.1"
                     /translation="MNRIARLWRTTTVRLTAVFILLFVIFSILLLTFIAYESSIQIQQ
                     QQTTTIDREVDLLQRIDARAGIRGTIIAVQRLADLPGPGIYYLGSTTGQQIAGNVSNF
                     PVNVLQHEGVFSFNYERDDPIEGEDSEGFAVVRSLVLESGLRLIVGRDVVERRGFTVI
                     VFQGFLLAVAGILAFSMVAGVVTARRVLRRIDVINATSSKIMSGNLSERIPVTKRNDE
                     FDVLAESLNAMLDRIEGLMQGLKEVTDNVAHDLKTPLTRLRTKAEAALRDGTDPEVQR
                     DALETTLTESDKLIRTFNALLMIARAEAGAPSGAFADVDVSEVAADVAELYEPVAEER
                     EMAFATSIAPDVHLRGNRELIGQAIVNLIENALKYYEPAEGKTGRITVSVVHADGRVR
                     IEVGDNGPGIPAEDRSRVLERFVRLEQSRTEEGSGLGLSLVAAVARLHRGEFRIEDNA
                     PGVRAVIDLPEA"
     gene            complement(2814..3485)
                     /locus_tag="VHZ56_02170"
     CDS             complement(2814..3485)
                     /locus_tag="VHZ56_02170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX4296805.1"
                     /translation="MKILLIEDDREAASYLIQALDEAGHVTHHASDGETGFAMASSMD
                     YDVLVVDRMLPRRDGLSIVESLRAEGNKTPVLILSALGEVDDRVTGLRAGGDDYLAKP
                     YAFTELLARIEVLARRSSPSEAATSYEVGDLSLDRLSRKVERSGDGILLQPREFRLLE
                     YLMKNAGKVVTRTMLLENVWDYHFDPQTNVIDVHMSRLRSKIDKGHANPLLHTIRGAG
                     YMIRE"
     gene            complement(3571..5136)
                     /locus_tag="VHZ56_02175"
     CDS             complement(3571..5136)
                     /locus_tag="VHZ56_02175"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HEX4296806.1"
                     /translation="MRSTFLSRTRRWIGASALAILVGLGGGSAFLMASSTPMIAAQVT
                     PAAQISPPATAPSQGFADLVAAVKPAVVSIVVEGRDKSGAQFDDQGGGYNPQLPDLPD
                     DNPLKKFFQQFGNGNGNGPPGGRAPGGGGQQDQGQKYVAAGSGFLISPDGYIVTNNHV
                     VENATKVTVTFDNGDQKPATIIGTDQRSDLAVVKVDGLTDAPYVKFAQDDIRVGDWVV
                     AVGNPFGLGGTVTAGIVSARGRDVQGSAYGDFLQIDAAVNMGNSGGPAFNMKGEVVGV
                     NTEIFSPNGGNVGIAFAIPAKTVQQITTALIQSGSVTRGFLGVSIQDVTRDIADSVGL
                     KDAKGALVTQLADDSPGGKAGLQSGDIITQVNGQEIDNALALSRTIAGMAPGTTVQLT
                     VWRNNATTTVSATLGTLKEQNPTKPTTPTPPADNSPMQSSVGITLVPNSGAEGGLLIQ
                     AVDPNSVAADKGFTVGDIVLEVDNKKVTTGKEFEDAIAAVKTSGRGTALIKAERDGNV
                     RFIGLPLSAAATN"
     gene            complement(5315..5773)
                     /locus_tag="VHZ56_02180"
     CDS             complement(5315..5773)
                     /locus_tag="VHZ56_02180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein"
                     /protein_id="HEX4296807.1"
                     /translation="MRALLVLFSLFWLAVPAFAVNPDEMLADPALEARARVISEGLRC
                     LVCQNESIDDSNADLAHEIRVLVRDRLKAGDTDDQVRQYLVDRYGEFVLLKPVFAPHT
                     LLLWIAAPVILLGGGIVLVVMARRRRTGAAAAPLSPEEQRVLDELEKPMS"
     gene            complement(5770..>6856)
                     /locus_tag="VHZ56_02185"
     CDS             complement(5770..>6856)
                     /locus_tag="VHZ56_02185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c-type biogenesis CcmF C-terminal
                     domain-containing protein"
                     /protein_id="HEX4296808.1"
                     /translation="LTSVHSFATDPTRGLVILVLLALFIGGAFALFAFRASTLRLGGL
                     FAPISREGALILNNLFLATGAAAVLVGTLYPLLLEALTGKTISVGAPFFSLTFGTIMV
                     PLLIVLPFGPFLAWKRGDLIAVTQRLAGAAGAAIFVTILIFALTGASINLSPLGLLLG
                     FWVAFGAVAELIDRAGIGRMAPGQSLRRLVGLPRSAFSTAIAHFGLGMSVIGIVAASS
                     WQLELITTMQPGTTKTIGDYTLKFDGIDNLDVENYAAQQGRFTVTGPGGGTRQMTPER
                     RIYTASGTPTTEAAIETYGFSQLYLQLGEPGANGSQVVRAWYKPYVTLIWLGAIVMAF
                     AGFLSLTDRRLRVGAPRRAAVKPAPAE"
BASE COUNT         1077 a         2184 c         2480 g         1115 t
ORIGIN      
        1 gtaggcgagc gcggcatcga ccgagagcgc caccggggtg gagcccgggt cgggccgcag
       61 ccgcaggtcg gtgcggaaca catagtcgcc accgacgcgg tcctgcagca gcgcggccag
      121 ccgctggacg atgcgcgaat aggttttggt cgcctcgtcg gggtcggcga ggccgccggc
      181 gtcgcggtcg aaaaacgcca cgatgtcgat gtcggaggaa tagttgagct cgcggccccc
      241 gtgcttgccg agcgcaaaca gcgccagccc ggaacgcccg ggcgccggct cggcgaggaa
      301 gtcgcccttc gcgtgggcgc gccgcagcag cacggccagc ccggcatcga gcgccgtatc
      361 ggcgagatcg gagagcgcgg ccgtcgcctg ctgcgtcgac cacaggccgc cggtctcggc
      421 cgcggcggca agcagcgcga tgcgcccctt ggcctgtcgc atgcgggtgc cgatcgcttc
      481 ctcatcggct gccactccag cggcggcccc gagttccgca agctcggcgg cgagcgccgc
      541 atccgcggcc ggcacggcag tcgccagcca ggtgcgatga cggccctcga gctcgcgcag
      601 atagggcgag gcggccagca gcctgtcgag ggggatgggc atgggcaagg cttagcggcc
      661 ggccgtggcg cgggcaagga ggccgagatc ccccgccgcc gccgtggata cgaagatttg
      721 accgctggtt ttcccgtccg ggcgcgttat gtttcctcgc ctcctctttt gccggatctc
      781 cccatgcgtt tcgcgctcgc ttccattgcc ctgctggttc ccctcgcggc cgcggctccc
      841 gccagcgcgg cggagctgtc gggcatgggg gccgacctgt tcggcaacta cttccatttc
      901 ggccagccca acctgcagaa gccgccggta cgcggcatga cggcgggcgg cgtgcggatc
      961 gacctgcagc acaccaagct gtcgacgctg cgggcggctt tcggcggcac catccagacc
     1021 gaggggtcgg agggcagcct cgcgagctgg ctctgctacc acaccaacgg cagcaagacc
     1081 gagccggcgg ccaacacctg gttcatctcc aatatcctgg gcggcggcga gttcgtgatg
     1141 atcgtcgcgg tcgaggcgga cgactcgacg ccggacgatt gcggcccggc gccggcccgc
     1201 ttcagcctgc cgaagatggg catccccggc ctcggcgagt cgagctcggc gctgcgcaac
     1261 gccctcggct tttcgggcgg cagcaagatc acctaccgcg ccgacgtgcc ggcggccgat
     1321 ggcctcggca ccgccgacaa cgctcagtac ctcgcctatg tgctgtcggg cggcgtcatc
     1381 gccgcctatg gcgtcggcga gacctcggtg aattcgccca agaactgagg gctcacgcct
     1441 ccggcaggtc gatgaccgcc cgcacgccgg gagcgttgtc ctcgatgcgg aactcgccgc
     1501 ggtgcaaccg ggcgacggcg gcgaccagcg acaggccgag tcccgagcct tcttcggtgc
     1561 ggctctgctc gagccggacg aagcgctcga ggacgcgcga gcggtcctcg gccggaatgc
     1621 ccggaccgtt gtcgccgacc tcgatccgca cgcggccgtc ggcgtggacg accgagaccg
     1681 tgatgcggcc ggtcttgccc tcggccggct cgtagtattt gagcgcattc tcgatgaggt
     1741 tgacgatcgc ttggccgatg agctcgcggt tgccgcgcag gtgcacgtcg ggcgcgatgc
     1801 tggtcgcgaa cgccatttcc cgctcctcgg cgaccggttc gtagagctcg gcgacgtcgg
     1861 cggccacctc gctgacgtcg acatcggcga aggcgccgga cggtgcgccg gcttcggcgc
     1921 gggcaatcat cagcagcgca ttgaaggtgc ggatgagctt gtcgctctcg gtcagcgtgg
     1981 tctcgagcgc gtcgcgctgc acttcgggat cggtgccgtc gcgcagcgcc gcttccgcct
     2041 tggtcctgag ccgtgtcagc ggtgtcttga gatcgtgggc gacgttgtcg gtgacctcct
     2101 tgagcccctg catcagaccc tcgatgcgat cgagcatggc gttgaggctt tcggcgagca
     2161 cgtcgaactc gtcgttgcgt ttggtgacag gaatgcgctc gctgagattg ccggacatga
     2221 tcttggacga ggtggcgttg atcacgtcga tgcggcgcag cacgcggcgg gccgtcacca
     2281 cgccggcgac catcgagaag gcgaggatgc cggcgacggc gagcaggaaa ccctggaaga
     2341 cgatgacggt gaagccgcgg cgctcgacca cgtcgcggcc gacgatcagc cgcaggccgc
     2401 tttcgagcac cagcgagcgc acgaccgcaa agccttcgga gtcctcgccc tcgatcgggt
     2461 cgtcgcgctc gtagttgaag ctgaagacgc cctcgtgctg cagcacgttg accggaaaat
     2521 tgctgacgtt gccggcgatc tgctggccgg tggtgctgcc gagataatag atgcccggtc
     2581 cgggcaggtc ggcgaggcgc tgcaccgcga tgatggtgcc gcggataccg gcccgcgcgt
     2641 cgatgcgttg cagcaggtcg acctcgcggt cgatggtcgt cgtctgctgc tgctggatct
     2701 ggatgctcga ttcgtaggcg atgaacgtca gcagcagaat cgagaagatg acgaagagca
     2761 ggatgaagac ggcggtgaga cggacggtag tcgtccgcca cagccgggcg atcctattca
     2821 cggatcatgt atccggcgcc gcggatggtg tggagcagcg ggttggcgtg gcccttgtcg
     2881 atcttggagc gcagccgcga catgtgcacg tcgatgacgt tggtctgcgg atcgaagtga
     2941 tagtcccaga cgttttcgag cagcatggtg cgggtcacca ccttgccggc gttcttcatc
     3001 agatattcga gcaggcggaa ttcgcgcggc tgcagcagga tgccgtcgcc gctgcgctcg
     3061 accttgcgcg acagccggtc gaggctcaaa tcgccgacct cgtagctggt cgccgcttcg
     3121 gaggggctgg agcggcgggc gagcacctcg atgcgggcga gcagctcggt gaaggcatag
     3181 ggcttggcga ggtagtcgtc gccgccggcg cgcaggccgg tgacgcggtc gtcgacttcg
     3241 cccagcgcgc tgaggatgag aacgggagtc ttgttgccct cggcgcgcag gctttcgacg
     3301 atggagaggc cgtcgcggcg gggcagcatg cgatcgacga cgagcacgtc gtagtccatg
     3361 ctcgaggcca tggcgaagcc ggtctcgccg tcggaggcgt gatgggtcac gtgccccgcc
     3421 tcgtcgagcg cctggatcag atagctcgcc gcctcgcggt cgtcctcgat caacaggatt
     3481 ttcatgacgc caacctaatg ggcagatgca cccggatcaa taagtgccgg ccccggacgt
     3541 ggattccggg accggctggg gggatagccc ttagttagtg gcagcagcgc tgagcggcag
     3601 gccgatgaac cggacgttgc cgtcccgctc ggccttgatc agtgccgtgc cgcggcccga
     3661 agtcttgacc gcggcgatcg cgtcctcgaa ctccttgcca gtggtgacct tcttgttgtc
     3721 gacctcgagg acgatgtcgc caaccgtgaa gcccttgtcg gcggccaccg agttgggatc
     3781 gaccgcctgg atcagcagtc cgccctcggc gccgctattg ggcaccaggg tgatgccgac
     3841 gctcgactgc atcgggctgt tgtcggccgg cggggtcggg gtggtcggct tggtcgggtt
     3901 ctgctccttg agcgtaccga gggtcgccga gacggtcgtc gtggcgttgt tgcgccacac
     3961 cgtcagctgc accgtggtac ccggagccat gccggcgatg gtccgcgaca gcgccagggc
     4021 gttgtcgatt tcctggccgt tgacctgggt gatgatgtca cccgactgca ggcccgcctt
     4081 gccgcccggc gaatcgtcgg ccagctgcgt caccagggcg cccttggcgt ccttgaggcc
     4141 gacgctgtcg gcgatgtcac gggtcacgtc ctggatcgag acgccgagga agccgcgggt
     4201 caccgagccg ctctggatga gcgcggtggt gatctgctgc accgtcttgg ccgggatggc
     4261 gaaggcgatg ccgacgttgc cgccattggg cgagaagatc tcggtgttca cgccgacgac
     4321 ttcgcccttc atgttgaagg ctgggccgcc ggaattgccc atgttgaccg ccgcatcgat
     4381 ttgcaggaag tcgccatagg cggagccctg gacgtcacgg ccacgggccg agacgatgcc
     4441 ggccgtcacg gtgccgccga ggccgaacgg attgccgacc gcgacgaccc agtcgccgac
     4501 gcggatgtcg tcctgcgcga acttcacgta gggggcatcg gtcaggccgt cgaccttgac
     4561 caccgcgagg tcggagcgct ggtcggtgcc gatgatcgtc gccggcttct ggtcgccatt
     4621 gtcgaaggtg acggtgacct tggtggcgtt ctcgaccacg tggttattgg tgacgatgta
     4681 gccatcgggc gagatcagga aaccggagcc ggccgcaacg tatttctggc cctggtcctg
     4741 ctggccgccg ccgccggggg cgcgtccgcc cggagggcca ttgccgttgc cgttaccgaa
     4801 ctgctggaag aacttcttca gcgggttgtc gtccggcagg tcgggcagct gcgggttgta
     4861 gccgccgccc tggtcgtcga actgggcgcc gctcttgtcg cggccttcga ccacgatcga
     4921 aacgacggcc ggcttgacgg ccgcaacgag gtcggcgaag ccctgcgagg gggcggtagc
     4981 cgggggactg atctgtgccg cgggggtgac ctgcgccgcg atcatcgggg tggacgacgc
     5041 catcaggaac gccgaaccgc cgccgagacc aacgaggatc gcgagggccg aagctccgat
     5101 ccagcggcgg gtccgtgaca ggaaagtgga gcgcataggg tttgttctcc ttcaaacagc
     5161 tctcaacatg tgagtgccgt tatcggggga tggccctttc cgcgatgttg cgtcaacatt
     5221 accctttggt aagggctggc cggatattcg cgcaggactg gcaggcgagg ttctatactg
     5281 ctgaaagggc tcggataaac cttgatccta aatattagga catgggcttt tccagctcgt
     5341 cgagcacccg ctgttcctcg ggcgaaagcg gcgccgcggc ggcccccgtc cggcgccgcc
     5401 gggccatgac caccagcacg atgccgccgc ccagcagaat caccggcgcg gcgatccaca
     5461 gcagcagcgt gtgcggcgcg aacaccggct tcagcagcac gaactcgccg tagcggtcga
     5521 ccaggtattg gcggacctgg tcgtcggtgt cgccggcctt cagccggtcg cgcaccagaa
     5581 cgcggatttc gtgcgccagg tcggcattgg aatcgtcgat cgattcgttc tggcagacga
     5641 ggcagcgcag gccttcggag atcacgcggg cccgggcctc gagcgccgga tcggccagca
     5701 tctcgtcggg attgacggca aaggccggca ccgcgagcca gaacaggctg aagaggacga
     5761 gcagcgccct cattcggccg gggccggctt gaccgcggca cggcgtggcg ccccgacgcg
     5821 cagccgccgg tcggtcagcg acaggaagcc ggcgaacgcc atgacgatgg cgccgagcca
     5881 gatcagcgtg acgtagggct tgtaccaggc gcgaaccacc tggctgccgt tggcgccggg
     5941 ctcgcccagc tgcaggtaga gctggctgaa gccgtaggtt tcgatcgccg cctcggtcgt
     6001 gggggtgccg ctggcggtgt agatgcggcg ctccggcgtc atctggcggg tgccgccgcc
     6061 cggcccggtg acggtgaagc ggccctgctg cgcggcgtag ttttcgacgt cgaggttgtc
     6121 gatgccgtcg aatttcagcg tgtagtcgcc gatggtcttg gtggttcccg gctgcatggt
     6181 ggtgatcagc tcgagctgcc aggacgaggc cgcgacgatg ccgatgacac tcatgccgag
     6241 gccgaaatgg gcgatggcgg tggagaacgc cgagcgcggc aggccgacca gccggcgcag
     6301 gctctggccg ggcgccatgc ggccgatgcc ggcgcggtcg atgagttcgg cgacagcgcc
     6361 gaaggcgacc cagaagccga gcagcaggcc gagcggcgac aaattgatcg aggcgccggt
     6421 gagggcaaag atcaggatgg tgacgaagat cgcggcgccg gcggcgccgg cgaggcgctg
     6481 ggtgacggcg atcaggtcgc cgcgcttcca ggcgaggaac gggccgaatg gcaggacgat
     6541 cagcagcggc accatgatgg tgccgaaggt gagcgagaag aacggcgctc cgaccgagat
     6601 ggtcttgccg gtcagcgcct cgagcagcag cggataaagc gtgccgacca gtaccgccgc
     6661 ggcgccggtg gcgaggaaca aattgttgag gatcagcgcg ccctcgcggc tgatcggcgc
     6721 gaacaggccg cccagccgca gcgtcgaggc gcggaaggca aagagcgcga aggcgccgcc
     6781 gatgaacagc gccagcagca ccaggatgac gaggccgcgg gtcgggtcgg tggcgaagct
     6841 gtgcaccgag gtcagc
//
LOCUS       DATAZA010000088         6718 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2908059, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000088 DATAZA010000000
VERSION     DATAZA010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6718
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2908059"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            92..2557
                     /locus_tag="VHZ56_02190"
     CDS             92..2557
                     /locus_tag="VHZ56_02190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HEX4296809.1"
                     /translation="MSEHRIRDLVEQMTLEEQVSLLSGEDFWSLPAIPRLGIGKLRVT
                     DGPNGARGGGGLVGGVRSAAFPVGIALGASWNPGLVEEIGAALAEEVKSKGAHVSLSP
                     TVNIHRSVTNGRNFECYSEDPVLTAQLSGAFITGLQGQGVAATIKHFVGNESEIERTS
                     MSSEIDERTLREVYLVPFEHAVKVAGTWGIMSSYNRLNGTFTSESQWLLTGVLRNEWH
                     YTGVVVSDWFGSHSTAPTMNAGMDLEMPGPSRDRGQKLLDAVAAGEVTPDMVRQRATN
                     VLRLMDRTGALDDHAPWQERAEDRPAHRALIRRAGAEAAVLLKNDGLLPLDPAKRQRL
                     AVIGPNAKVAQIMGGGSAQLNPHYAVSPWQGMVAAFGEDRLSFAEGTTNRRFEPLLQS
                     EFAVEYFDSPDLGGAVMHRETQQGSEAFLIGPVGGGKVDAERWSARFTTEFVPTASGE
                     HRVGIAAAGLARVKIDGQLVVDDWSNWQRGRTFFEEGSDEVVGTLAMVAGQAYRVEIE
                     FARRPAAVLGISAFRMGIGLPLGDAAIAEAAAVAGAADVAVVCVGRSGEWDTEGSDLL
                     DIRLPGRQDDLVRAVAAANPRTVVVLQTGGPVEMPWLGDVAAVLEAWYPGQEAGNAIA
                     DVLAGMAEPGGRLPQSFPVRWNDNPAQSQDREVYPGLAGKVRYEEGVFVGYRHYDRHG
                     IAPLFPFGFGLSYTSTALEDFAVDDGGFESDGRVVVSVTVRNRGARAGSEVVQLYVGD
                     ETASVPRPVKELKAFIKVHLGAGEARRVSLELGPRDFAFFDVVRSAWSVEPGVFALML
                     GTSATAIAFTAAVRRVEPLTLPV"
     gene            2695..3867
                     /locus_tag="VHZ56_02195"
     CDS             2695..3867
                     /locus_tag="VHZ56_02195"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HEX4296810.1"
                     /translation="MQVARFARRMGLCLALAVLLSVPAVAAPVRKPVPAQPAVPVVAT
                     IPQLLIDATTLQVLYAEDAGLPWHPASTTKLMTAYLTFAAIKAGRVSLDTPVKISQHA
                     WNQEPAKSGLDVGETVTLKDALYIMLVKSANDMAVAVAETVGGDEKSFVAQMNTMAQQ
                     MGLTATHYDNANGLKSPGQISSARDLAMLALFVQRDYPQYMPIFSTQQVQLGPHRLET
                     SNGMLEHFAGMTGMKTGFICQSGLNIVATVNRDGRQLLAVVLGASSVRERNELAAQLI
                     LRGLSGALKPTGQTVMQLKDVDAPPADISSLICGRGARAYIKQREAAFPMGLRGQPSY
                     LTDKIAGPAYVATDLGKVVDGVPLPRDRPGSQAPTVTAAATGDADADPADSDQQGD"
     gene            complement(3864..4076)
                     /locus_tag="VHZ56_02200"
     CDS             complement(3864..4076)
                     /locus_tag="VHZ56_02200"
                     /inference="COORDINATES: protein motif:HMM:NF013379.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HEX4296811.1"
                     /translation="MLDARGLKCPLPVLKLEKRLAAMPPGATVAILATDPVARIDIPL
                     YCTQQGHDCTMTTEADTFRFAITKRR"
     gene            complement(4078..4530)
                     /locus_tag="VHZ56_02205"
     CDS             complement(4078..4530)
                     /locus_tag="VHZ56_02205"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEX4296812.1"
                     /translation="MLSALSRVALAAMMTAALAACSTGGLSPGLSQRMDMPGAQLNRA
                     DALNIVNQYRSSTGAGPLTDDSSLDATAQTLVTQYAKTGHQPAAPAGTLDIRYSAGYF
                     TFAETFSGWRNSTTDAPAIADAKATRAGLAAIFDNNTPYGVYWVIILG"
     gene            complement(4625..4701)
                     /locus_tag="VHZ56_02210"
     tRNA            complement(4625..4701)
                     /locus_tag="VHZ56_02210"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4665..4667),aa:Arg,seq:cct)
     gene            4938..6548
                     /locus_tag="VHZ56_02215"
     CDS             4938..6548
                     /locus_tag="VHZ56_02215"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX4296813.1"
                     /translation="MNALLKIAGALLLATSLSVPAAMAQSTVTGPGGNTSGTYMDYMK
                     TVYDRAGAPEITSLPLTEFDADFKLNPMGAASWTQSADGLTWTFKLQPNLVWSDGVPL
                     TAEDYVFALQRAAKEGYDFNWYWAFAGGIKNWSNVTDKGADVSTLGIKAVDDTTIEVT
                     TDSPKSYFPGVATLWYPVPKHVVDKLGDDYALNVDTLVASGPFMVKEWEKSNNNMTYV
                     KNPKYNGPWQAQIDSLTLDNTIGPPEVGFPAFMAGEADWTYLNTGEVPVLQQQFPKEI
                     RKNAVFAVSYLAFDVTKPPFDNVDVRKAFQAAINRDELTSTVLKDVAVPADSILAPSY
                     PGYQQKIADEAKFDPKLAQDEMAKAGYPGGKGFPPIEIWYRVESNYNGVIAPAMLQYL
                     QAQFKTILGIDLGIKSMPSKDWTQALKDQSNGLFLAPYEYDYLDPSNFYDLFKTGGRH
                     HNSFPDYDAAVNAGDAEADWNKRLDDYAKAEQVLIDNASIVPLVHPITVAAVSDKLQG
                     PGVTPNAQGFTPLDRLSGYLYTHITKQP"
BASE COUNT         1125 a         2109 c         2412 g         1072 t
ORIGIN      
        1 tggttactgt ctgtgcctag ggctcaaatc ggtattgttt gacagcgcaa gcgggctcgt
       61 tgcctgtcgg aggcctgagc gggaggccgg catgagcgag catcgcattc gcgacctggt
      121 ggagcagatg acgctcgagg agcaggtcag cctgctgtcg ggcgaggatt tctggtcgct
      181 gccggcgata ccgcggctcg gcatcggcaa gctgcgggtc accgacgggc cgaacggcgc
      241 ccgaggcggc ggcggcctcg tcggcggggt caggtcggcg gcgtttccgg tcggcatcgc
      301 gctgggcgcc agctggaatc cgggactggt cgaggagatc ggcgcggcgc tcgccgagga
      361 ggtcaagtcg aagggcgcgc atgtctcgct gtcgccgacc gtcaacatcc accgctcggt
      421 gaccaacggg cgaaatttcg aatgctattc ggaagatccg gtgctcaccg cgcaactgag
      481 cggcgccttc atcaccgggc tgcagggcca gggcgtggcc gcgacgatca agcatttcgt
      541 cggcaacgaa tccgagatcg agcgcacgtc gatgagctcg gagatcgacg agcggacact
      601 gcgcgaggtc tatctcgtgc cgttcgagca tgcggtgaag gtcgccggca cctggggcat
      661 catgagctcg tacaaccggc tcaacggcac cttcacgtcg gagagccagt ggctgctgac
      721 cggcgtgctg cgcaatgagt ggcactacac cggcgtcgtc gtgtccgact ggttcggctc
      781 gcattcgacg gcgccgacga tgaatgccgg catggacctc gagatgcccg gcccgtcccg
      841 ggatcgcggg cagaagctgc tcgatgccgt cgccgccggc gaggtgacgc cggacatggt
      901 gcggcagcgg gcgacgaacg tgctgcggct gatggaccgg acgggggcgc tcgacgacca
      961 tgcgccgtgg caggagcggg ccgaggaccg gccggcgcat cgggcgctga tccggcgggc
     1021 cggcgccgag gccgccgtgc tgctcaagaa cgatggccta ttgccgctcg atccggcgaa
     1081 gcggcagcgc ctcgcggtga tcggcccgaa tgccaaggtg gcgcagatca tgggtggcgg
     1141 cagcgcgcag ctcaacccgc actacgccgt gtcgccgtgg caagggatgg tggcggcgtt
     1201 cggcgaggac cggctgagct ttgccgaggg gacgaccaac cggcgcttcg agccgctgct
     1261 gcagtcggag ttcgcggtcg aatatttcga ctcgcccgat ctcggcggcg cggtgatgca
     1321 tcgcgagacg caacagggca gcgaggcgtt cctcatcggt ccggtgggtg gcggcaaggt
     1381 cgatgcggag cgctggtcgg cgcggttcac gacggagttc gtgccgacgg cgagcggcga
     1441 acatcgcgtc ggcatcgccg cggcgggact ggcccgggtc aagatcgacg ggcagctggt
     1501 ggttgacgac tggagcaact ggcagcgcgg ccgcaccttt ttcgaggagg gcagcgacga
     1561 ggtggtcggt acgctcgcga tggtcgcggg gcaggcctat cgggtcgaga tcgagttcgc
     1621 gcggcggccg gcggcggtgc tggggatttc ggcgttccgc atgggtatcg gcctgccgct
     1681 cggcgatgcg gcgatcgccg aagccgcagc ggtggcgggg gcggccgacg tggcggtggt
     1741 gtgcgtcggc cggagcggcg agtgggacac cgagggcagc gacctgctcg acatccggct
     1801 gccgggccgg caggacgatc tggtgcgcgc agtagcagcg gccaatccac gcaccgtggt
     1861 ggtgctgcag accggcgggc cggtcgaaat gccgtggctc ggcgacgtcg cggcggtgct
     1921 cgaggcctgg tatccggggc aggaggcggg caacgccatt gccgatgtgc tggcgggcat
     1981 ggcggagccg ggcgggcggc tgccgcaaag ctttccggtg cgctggaacg acaatccagc
     2041 acagtcgcag gaccgcgagg tctatccggg gctcgccggc aaggtgcgct acgaggaggg
     2101 ggtgttcgtc ggctaccggc actacgaccg gcacggcatc gcgccgctgt tcccgttcgg
     2161 tttcgggctc agctacacct cgaccgcgct ggaggacttt gctgtggacg atggtggctt
     2221 cgagtccgac gggcgcgtcg tcgtgtcggt gacggtccgc aaccgcggag cgcgggccgg
     2281 cagcgaggta gtgcagctgt atgtcgggga cgagaccgcc tcggtgccgc ggccggtcaa
     2341 ggaactcaag gcgttcatca aggtgcacct cggcgccggc gaggcgcggc gggtgagcct
     2401 cgagctgggc ccccgcgatt ttgccttctt cgacgtcgtc cggagcgcct ggtcggtcga
     2461 accgggggtt ttcgcgctga tgctgggcac gtcggccacc gccatcgcgt tcacggctgc
     2521 cgtgcggcgg gtcgagccgt tgacgctgcc ggtctaggcg ccgccgaatc gcggccgcat
     2581 cgggagcggc gacagcaggc ggttcaaaat cccgtcagca gcaatcggtg ttcttgaggc
     2641 ggccacagta tggggctaga agctgcggac catttctaga ctgagactgg attgatgcag
     2701 gtcgcgcgat tcgcccgccg gatgggactc tgtctcgcgc ttgccgtcct cctgtcggtg
     2761 ccggccgttg ccgccccggt gcggaagccg gttccggcgc aaccggcggt gccggtggtc
     2821 gcgacgatcc cgcagctctt gatcgatgcg acgacgctgc aggtcctcta cgccgaggat
     2881 gccggcctgc cctggcatcc ggcctcgacc accaagctga tgacggccta cctcaccttc
     2941 gcggcgatca aggcgggccg cgtgagcctc gatacgccgg tcaagatcag ccagcacgcc
     3001 tggaaccagg agccggccaa atcggggctc gatgtgggcg agaccgtcac gctcaaggat
     3061 gcgctctaca tcatgctggt gaagtcggcg aacgacatgg cggtggccgt ggccgaaacc
     3121 gtcggcggcg acgagaagag cttcgtcgcg cagatgaaca cgatggccca gcagatgggc
     3181 ctgacggcga cccattacga caatgccaac gggctcaaga gcccgggcca gatcagctcg
     3241 gcgcgcgatc tcgccatgct ggcgctgttc gtgcagcgcg actatccgca atacatgccg
     3301 atcttttcga cgcagcaggt gcagctcgga ccgcaccggc tggagaccag caacggcatg
     3361 ctggagcatt ttgccgggat gaccggcatg aagaccggct ttatctgcca gtcgggcctc
     3421 aacatcgtcg cgacggtcaa ccgcgacggc cggcaattgc tggcggtcgt gctcggcgcg
     3481 tcctcggtgc gggaacgcaa cgagctggcg gcgcagttga tcctgcgcgg cctgtcgggg
     3541 gcactgaagc cgaccgggca gacggtgatg cagctcaagg acgtcgatgc gccgccggcc
     3601 gacatctcgt cgctgatctg cggcaggggc gccagggcct acatcaagca gcgcgaggcg
     3661 gcgttcccga tggggctgcg cggccagccg agctacctca ccgacaagat cgccggtccc
     3721 gcctacgtgg cgaccgacct cggcaaggtg gtcgacggcg tacccctgcc gcgggaccgg
     3781 ccgggcagcc aggcgccgac cgtcaccgcg gcggccaccg gcgatgccga cgccgatccg
     3841 gccgacagcg accagcaggg cgattagcgc ctcttggtga tggcgaagcg gaaggtatcg
     3901 gcttcggtgg tcatcgtgca gtcatggccc tgctgcgtgc agtagagcgg gatgtcgatg
     3961 cgcgccaccg ggtcggtggc gaggatggcg acggtggcgc ccggcggcat cgcggccagg
     4021 cgcttttcga gcttcagcac gggcagcggg catttgagcc cgcgcgcgtc gagcacctca
     4081 tccaaggatg atgacccagt agacgccgta gggcgtgttg ttgtcgaaga ttgcggcgag
     4141 gcctgccctg gtggccttgg cgtcggcgat ggcgggggcg tcggtggtcg aattgcgcca
     4201 gcccgagaac gtctcggcga aggtgaaata gccggctgaa tagcgaatat cgagggtgcc
     4261 cgcaggggcg gccggctggt ggccggtctt ggcgtactga gtgaccagcg tctgggcggt
     4321 ggcatcgagg ctgctgtcgt cggtgagcgg gccggcgccg gtcgaactgc ggtactggtt
     4381 gacgatattg agcgcatcgg cgcggttgag ctgggcgccc ggcatgtcca tgcgctggct
     4441 cagcccgggc gacagtccgc cggtcgagca cgctgcaagc gcggcggtca tcatggctgc
     4501 gagggcaacg cgcgaaaggg cggagagcat cagggactac ctcttctggc tggcggggcg
     4561 gggtggccgc aaaacacacc ctcggaccga ggctggtgcc tcggctgccg ccgcgacttt
     4621 tctatggcgg ccccgatgag attcgaactc atggcctcag gattaggaat cctgcgctct
     4681 atccagctga gctacgggac cgtccgcctc gcgtgtagca aaagccgccg cggctggaaa
     4741 ccgcttccga gccgggcgcg attcacgtgg gcagcacggg aatgctgcgg cagtggcggg
     4801 ccgacgggag tccttgccgg ttctggtgcg ccggggcgac ggatcggctt gtcaatttcg
     4861 gccaactttg tcagacatat gtcattgggc cagccactgg ggaacgaagc cggcccagca
     4921 accagggaga gacgtgaatg aacgcactgc tcaagatagc tggtgcgctg cttcttgcga
     4981 cgagcctgtc cgtgccggct gcaatggccc agagcaccgt gaccggcccc ggcgggaaca
     5041 ccagcggcac ctatatggac tacatgaaga cggtctacga ccgcgccggc gcccccgaga
     5101 tcacttcgct gccgctgacc gagttcgacg ccgatttcaa gctcaacccg atgggcgcgg
     5161 cgagctggac gcagtcggcg gacgggctga cctggacctt caagctgcag ccgaacctgg
     5221 tctggtcgga tggcgtgccg ctcaccgccg aagactatgt cttcgccctg cagcgcgccg
     5281 ccaaggaagg ctacgacttc aactggtact gggcgttcgc cggcggcatc aagaactggt
     5341 cgaacgtcac cgacaagggc gccgacgtgt cgacgctcgg catcaaggcc gtggacgaca
     5401 ccacgatcga ggtcacgacc gactcgccga aatcgtattt cccgggcgtt gccaccctct
     5461 ggtacccggt gcccaagcac gtcgtcgaca agctcggcga cgactacgcg ctcaatgtcg
     5521 ataccctggt cgcctccggc cccttcatgg tcaaggaatg ggagaagtcg aacaacaata
     5581 tgacctacgt caagaacccg aagtacaacg ggccgtggca ggcgcagatc gacagcctga
     5641 cgctcgataa caccatcggg ccgccggaag tgggcttccc ggccttcatg gcgggcgagg
     5701 cggactggac ctatctcaac accggcgagg ttccggtgct gcagcagcag ttccccaagg
     5761 aaatccgcaa gaacgcggtt tttgcggtgt cctacctggc cttcgacgtg accaagccgc
     5821 cgttcgacaa tgtcgacgtg cgcaaggcct tccaggcggc gatcaatcgc gacgagctga
     5881 cgtcgacggt gctcaaggat gtcgcggtgc cggccgactc gatcctggcg ccgtcctacc
     5941 cgggctacca gcagaagatc gccgacgagg cgaagttcga tcccaagctc gcgcaggacg
     6001 agatggccaa ggccggctat ccgggcggca agggcttccc gccgatcgag atctggtatc
     6061 gcgtcgagag caactacaac ggcgtgatcg cgccggcgat gctgcagtac ctgcaggccc
     6121 agttcaagac catcctcggg atcgatctgg ggatcaagtc catgccgtcc aaggactgga
     6181 cgcaggccct caaggaccag agcaacggct tgttcctggc gccgtacgag tatgactatc
     6241 tcgacccgtc gaacttctac gaccttttca agaccggtgg tcgtcaccac aactcgttcc
     6301 ccgactacga cgccgccgtc aatgccggcg acgccgaggc cgactggaac aagcgcctcg
     6361 acgactacgc caaggccgag caggtcctga tcgacaacgc gtcgatcgtg ccgctggtcc
     6421 atccgatcac cgtcgcggcg gtgagcgaca agctgcaggg tccgggcgtt acgccgaacg
     6481 cccagggctt cacgccgctc gatcggctgt cggggtatct gtacacccac atcaccaagc
     6541 agccgtaagg cttgatggcg ggcgcccgat cggcgcccgc caactttacc cagggaaggc
     6601 gccggatgcg gctggttgac atcgacgacc tgcaggtgag cttcagccag cacgatgggc
     6661 tggtgcaggc cgtgcggggc gtcagcttcc acctcgatgc cggcgagagc ctcgggat
//
LOCUS       DATAZA010000089         1616 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3256706, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000089 DATAZA010000000
VERSION     DATAZA010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3256706"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..473)
                     /locus_tag="VHZ56_02220"
     CDS             complement(<1..473)
                     /locus_tag="VHZ56_02220"
                     /inference="COORDINATES: protein motif:HMM:NF021489.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2207 domain-containing protein"
                     /protein_id="HEX4296814.1"
                     /translation="MTTAASPRSAWNGVRARLAPRLIAFFLLLALAAAPALAREEITS
                     FTSNTTLATNGTVDVVETIVVNAEGDQIRHGIYRDLPLVLINPDRSRLRSDLSVLGVT
                     RDGEVENYSLESLGNGFRRIRIGDADTLVDPGAHTYVIHYAMTRMARFFADHDEL"
     gene            complement(565..1122)
                     /locus_tag="VHZ56_02225"
     CDS             complement(565..1122)
                     /locus_tag="VHZ56_02225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007196447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEX4296815.1"
                     /translation="MVGWIVLVVVILVVVYGVAAYNNLVRQRQLSQEGWSGIDVQLKR
                     RADLIPNLMESVKGYMGHERDTLEAVTNARAAAVSAQGGTPEQRAQAEGALSGALGRL
                     MAVAEAYPDLKASQNFLQFQAALQQTEDELQLARRYYNGTARNLNTAVQSFPSSILAG
                     LFHFTTVQYFEIDTPADRAVPQVKF"
     gene            complement(1335..>1616)
                     /locus_tag="VHZ56_02230"
     CDS             complement(1335..>1616)
                     /locus_tag="VHZ56_02230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase"
                     /protein_id="HEX4296816.1"
                     /translation="GLQQGPRPPFDFPGYWLYLGGRPIIHMQDRGAGMGGRGWIDHLA
                     FGPLVFAEQTARLDALAIAYTVGGIPGGPIRQLFVSGPEGSRLELQCPD"
BASE COUNT          271 a          454 c          618 g          273 t
ORIGIN      
        1 aacagctcgt cgtggtcggc gaagaagcgc gccatccgcg tcatggcgta gtggatgacg
       61 taggtgtggg cgcccggatc gacgagggtg tcggcgtcgc cgatgcggat gcggcgaaag
      121 ccgttgccaa ggctttcgag cgaatagttc tcgacttcgc cgtcgcgggt gacgccgaga
      181 acgctgaggt cggagcgtag gcgggaacgg tcaggattga tgagcaccag cggcaggtcg
      241 cggtagatgc cgtggcggat ctgatcgccc tcggcgttga cgacgatggt ctcgacgaca
      301 tcgacggtgc cgttggtggc cagcgtcgta ttggaggtga aggaggtgat ttcctcgcgg
      361 gccaacgccg gggcggcagc gagggcgagg aggaggaaga aggcgatgag gcgcggtgca
      421 agtcgcgctc gaacgccgtt ccaggccgat cggggagagg cggctgtcgt catcgaaagc
      481 tccgtggctg cctgccctgg gttcccgcgt tcgcgggagt gacgccgtgg gaggacggac
      541 cgctgcgttg aggcgaggcc caggctagaa cttgacctgg gggacggcgc ggtcggcggg
      601 ggtgtcgatc tcgaaatact gcacggtcgt gaagtggaag aggccggcga ggatgctcga
      661 ggggaacgac tggaccgcgg tgttgaggtt gcgggcggtg ccgttgtagt agcggcgcgc
      721 cagctgcaat tcgtcctcgg tctgctgcag cgccgcctgg aactgcagga agttctggct
      781 ggccttgagg tcggggtagg cttcggcgac ggccatcagc cggccgaggg caccggacag
      841 cgcgccctcc gcctgggccc gctgttcggg ggtgccgccc tgggcggaga cggcggcggc
      901 gcgggcgttg gtgacggcct cgagcgtgtc gcgctcgtgc cccatgtagc ccttcaccga
      961 ttccatcaga ttggggatga ggtcggcgcg gcgcttgagc tggacatcga tgccggacca
     1021 gccctcctgg ctcagctgcc gctggcggac gaggttgttg taggcggcga cgccataaac
     1081 gacgaccagg atgacgacga cgagaacgat ccagccgacc atgagaccct ccagcggcgc
     1141 gcccctcgcg ccctcgtgcc gagcttgtca ccggcacctg ggtgctgcaa ctgacgcggg
     1201 cggggtgaat ggcgaatgaa tggagagggc ggagcgggtt gaatatggct cgtaactcaa
     1261 tttcggttac gtagcagcat caatccgaat tgagtttatt tcgctcggtt atcaatctaa
     1321 atgcagttac ttttttagtc cgggcactgc aattccaacc gactgccttc ggggccgctg
     1381 acgaagagct ggcggatcgg gccgccgggg atgcccccga ccgtataggc gatggcgagg
     1441 gcgtcgaggc gggcggtttg ttcggcgaac acaagcgggc cgaaggccag atggtcgatc
     1501 cagccgcggc cgcccatgcc ggcgccgcga tcctgcatgt ggatgatcgg gcgaccgccg
     1561 aggtacagcc agtagccggg gaaatcgaag ggcgggcgcg gcccctgctg cagccc
//
LOCUS       DATAZA010000090        10294 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_819433, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000090 DATAZA010000000
VERSION     DATAZA010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 10294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10294
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_819433"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..431)
                     /locus_tag="VHZ56_02235"
     CDS             complement(<1..431)
                     /locus_tag="VHZ56_02235"
                     /inference="COORDINATES: protein motif:HMM:NF023169.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMIN domain-containing protein"
                     /protein_id="HEX4296817.1"
                     /translation="MFNCEVVAPAWRGPLGVLVTLLALWSAAAPAPALAQSALPDVLA
                     ARVSTTAQRARLVLDLSDSTQFAIVSLGDPERIAIDVKAADVQIATPQPVAGAGLVSG
                     FTTTMAEDGRARTELVLAQPAVVQQAYVLDKIAGQPARLVV"
     gene            1023..3791
                     /locus_tag="VHZ56_02240"
     CDS             1023..3791
                     /locus_tag="VHZ56_02240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HEX4296818.1"
                     /translation="MATKRMLVDGTHPEETRIVVTNGNRLEEFDFESASRRQLRGNIY
                     LAKVTRVEPSLQAAFIEYGGNRHGFLAFSEIHPDYYQIPVADREALMRDEEEAEREDH
                     DDSDSMPAEAPRRASVSEEAETIDADAQTPNASTEAEAEADPQSSEAADDDEAGSGRN
                     DGSHIEEAPASNEPVESLGGGGSDILEESRERRQRAPRRHAYKIQEVIKRRQVMLVQV
                     VKEERGNKGAALTTYLSLAGRYSVLMPNTARGGGISRKITNAADRKRLKDIVGDLEVP
                     QGQGIILRTAGASRTKAEVKRDFEYLQRLWESVRTLTLQSTAPCLVYEEGSLIKRTIR
                     DLYSKDIDELWVAGDDAYREAKDFMRMIMPSHAKNVGVYKDDQPLFSKFGVEGQLDQM
                     FSPQVTLPSGGYLVINPTEALVSIDVNSGRSTKEHNIEDTALQTNLEAAEEVSRQLRL
                     RDLAGLIVIDFIDMVENRSNRAVERKLKDSLKNDRARIQVGRISHFGLMEMSRQRIRF
                     GVVESSTHKCPTCNGTGLVRSVESVALMVMRNVEDHVLKKPGQSINVRVPVDVALYIL
                     NSKRGTLSTLEMKNGLSITIVADDHVGLQHYVIEKGEPRIATGDLPPPAHVRVDTAAI
                     EEADEPVVAEDEEDEEPSEAEAEAGAPARADETGDRQGRGRRRRRRGGRDRDEREPRP
                     ERQPAPVAAAASPEEPADDDDGEPDGDAAPQADGPRDENGEPRRRRRRGRRGGRRNRR
                     EGEENGAQPDVVAEPAANGMSEESTERVVAAVLAQDAIAADAGIEPDISVVPAAEGAE
                     KPRRARRSRKSADADAAVQDAVAQDAVPEGENPARPRSRSRKPRAEPPTEEQALRSAE
                     AIAVMPAAAPEPAATAAPAPTVDEAPRRARKELPADEIVVSSSSAPADDGAKPKRAGW
                     WQRGFFGS"
     gene            3856..4569
                     /locus_tag="VHZ56_02245"
     CDS             3856..4569
                     /locus_tag="VHZ56_02245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010911498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family protein"
                     /protein_id="HEX4296819.1"
                     /translation="MSRTERLLELLQMLRRHRAPVTGSALAGELGVSIRTVYRDIATL
                     QGQGAEIEGEPGLGYVLKPGFMLPPLMFSIDELEALVLGGAWVGRQTDDPRLSRAAGN
                     ALAKISAVLPAELRREVEAGTTFVVPRRIEPVQIDPSLLRDAIRKELKLRIGYHDDLG
                     RATDRVVWPFIIGFFEQRKVVSAWCELRNDYRHFRIDRIASLAATGERMPRRRHALLK
                     EWRERMDAERSRRQPAAEN"
     gene            4616..4984
                     /locus_tag="VHZ56_02250"
     CDS             4616..4984
                     /locus_tag="VHZ56_02250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004440552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX4296820.1"
                     /translation="MTSPNFILAYVADAPRSAALYSRLLGAQPVESSPSWAMFAFPNG
                     LALGLWSRSDVEPKATLPGGSEIGFPVANDDAVTQTRDAWAGLGLKILQEPTRMDFGY
                     TFTAADPDGHRLRVFAPAAR"
     gene            complement(4926..5171)
                     /locus_tag="VHZ56_02255"
     CDS             complement(4926..5171)
                     /locus_tag="VHZ56_02255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296821.1"
                     /translation="MIDGKAAAAARTAAAKKRSEIGIDYLEAAQSRIRQLQAHNLRLE
                     AQVRRLKEQLEAPEGEGAVSAPPERTPAGGGRRDRRR"
     gene            complement(5322..6494)
                     /locus_tag="VHZ56_02260"
     CDS             complement(5322..6494)
                     /locus_tag="VHZ56_02260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX4296822.1"
                     /translation="MIDGEGDEVMTAAATEGLAPFHGLEINALARGLEADGHDICFLE
                     QGQPAAPPAPRVLEAARAALASPQHYTHFAGQPKLREALARYYAEQHRVTVAPDSIVA
                     TMGSSSAFILAFAGGFERPPTIAVTRPGYPAYLNTLIGLGYRAVEIPVSGRQGWRLTA
                     ADIEAAYAREKFDGLLFASPANPTGAGVTRAELAEIVAACARLGVRLISDEIYHGLDY
                     RGPSVSALELTRDAIVINSFSKYYCMTGWRIGWMVLPDDVLRRTQILQQNMFIAAPTL
                     SQTAAVVALGERDYSEAQKAHYAANRPLLTAGLASLGLPVDESDGAFYAYADVGRFTN
                     DSLAFCHELLTVAGVAATPGIDFDRTNGNRFVRFSYAGSRETIDKALERLGAFLRR"
     gene            6607..7485
                     /locus_tag="VHZ56_02265"
     CDS             6607..7485
                     /locus_tag="VHZ56_02265"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEX4296823.1"
                     /translation="MSRLSIVLVLLVGLLAGGLGVSLLRPQAPGLGDSDVRAIVAEMQ
                     ARTAMPAPSMAMGDADAGKVDKLVQDFLMGNPMILDQMNAKLSAQKEVAQRQAEKDVI
                     DANKAQIYDAADNVVLGNPKGDVTLVEMFDYNCTYCRGALPDLAQLMTDDHNLRVILK
                     QFPILSSGSVDAARVALLVAKDPKIDYWQFHQKLFAERGEVGAAQALDVAASLGGNRV
                     ELMLDMNAKAPNDVLQANYDLAKSLNATGTPTYILGDEMIPGAMPIDQLKQKIANLRT
                     CGSTECPVQMPASPAG"
     gene            7557..7997
                     /gene="aroQ"
                     /locus_tag="VHZ56_02270"
     CDS             7557..7997
                     /gene="aroQ"
                     /locus_tag="VHZ56_02270"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HEX4296824.1"
                     /translation="MPKRILVINGPNLNMLGIREPKTYGTQTLADIEAMCKAEGKTLG
                     LTVECRQSNREGEICEWIQEAYGKKDGIVLNPAGYSHTSVAIRDAIAAVGIPTIEVHL
                     SNIHAREEFRHFSYVSAVAAGVICGLGAAGYRLALVALAERLGA"
     gene            8039..8524
                     /gene="accB"
                     /locus_tag="VHZ56_02275"
     CDS             8039..8524
                     /gene="accB"
                     /locus_tag="VHZ56_02275"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013214870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEX4296825.1"
                     /translation="MPKDVPADQQLIRAIAELLNEQNLAEIEIEREDLRVRVTRSYAA
                     TGVQQVMLPAAAPAAAAAAPTAPQGSASAAKSPAEDLASNPGTLTSPMVGTAYLSPEP
                     GKPVFVAVGSRVTEGQTILIIEAMKTMNQIPAHKSGTVSRILVADTSPVEYGQPLAVI
                     D"
     gene            8524..9870
                     /gene="accC"
                     /locus_tag="VHZ56_02280"
     CDS             8524..9870
                     /gene="accC"
                     /locus_tag="VHZ56_02280"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014328039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEX4296826.1"
                     /translation="MFQKVLIANRGEIALRVLRACKELGISTVAVYSTADRNAMHVRM
                     ADESVCIGPPPARDSYLNIPSILAACEITGADAVHPGYGFLSENARFARILSEHKITF
                     IGPSEHHIEIMGDKITAKKTAVELGIPVVPGSDGEVKTAEEAQKLAKKIGYPVIVKAT
                     AGGGGRGMKVANNDEEMSIAISTARTEAKAAFGNDSVYIEKYLQQPRHIEIQVMGDGQ
                     GNAVHLGTRDCSLQRRHQKVWEEATAPTVSPEQRAKIGETCAAAMRKLKYSGAGTIEF
                     LYENGEFYFIEMNTRLQVEHPVTERVTGVDLVYEQIRVASGEVLSLRQDEITFTGHAI
                     EVRINAEDPQTFAPSPGLIKFYHPAGGVGVRIDSAIYSGYTIPPYYDSLIGKLIVYGR
                     TREECLMRLRRAIDEFVVDGIKTTLPLFQRLIREPDILAGNYDIHWLEQFLAANKA"
BASE COUNT         1790 a         3607 c         3406 g         1491 t
ORIGIN      
        1 tcgaccacca ggcgggccgg ctgcccggca atcttgtcga gcacataggc ctgctgcacc
       61 accgccggct gggcgagcac cagttcggtg cgggcgcggc cgtcctcggc cattgtcgtg
      121 gtgaaccccg agaccagccc cgctccggcg accggttgcg gggtcgcgat ctggacgtcc
      181 gccgccttga cgtcgatggc gatgcgctcg ggatcgccga gcgagacgat ggcgaactgg
      241 gtggaatcgc tcaggtcgag gaccagccgg gcccgctgcg ccgtggtcga gacgcgcgcc
      301 gcgagcacgt cgggaagcgc cgactgcgcc agtgccggag ccggagccgc cgcggaccat
      361 agggcaagca gggtgacgag caccccgagg ggcccgcgcc acgccggcgc gacgacctcg
      421 caattgaaca agtcggcaga gctcccatat gaccggatag gcaaagcgca gtctttaggc
      481 gattctacgg ccggctggcg cccagtcggc gcccagccag cgctctgccc gccccgccgg
      541 aggcgccgcc agcctcatgg tttcgttacc gcgggaattt ttgattgcca atccgcggca
      601 agggtcctac aggcttgcag cgaggcggac tgccgccccg atccggttgc aagacggcac
      661 tggccgttcc cggaaagcta ggcggcagag ggatttatgg ctgaacgcca atatcccgga
      721 tgcggcactt tcggccgcct cgacaagttt tcggccccgt atgggccgag cggtgcgtcg
      781 gttgtccgac gcccacatag gaagaggttg gatgaccatc gggtcgacaa aacctgacgc
      841 aacgccgttt tctgcttgcg cttttgtcat tgctcgtccg tcggccgcca gtctcgctac
      901 accccgcggc gcagtgtttt gcgccgcatc ctcaagacct ttggccgcgc atggcgccat
      961 gcagaggaga ccggcaagcc ggctccagcg tgttggcgcg cgacggcctg gagtaaatct
     1021 atatggctac caagagaatg ctggtggatg gcacccaccc ggaagaaacc cggatcgtcg
     1081 tcactaacgg aaaccgcctc gaagaattcg atttcgaatc cgcctcgcgc cggcagctgc
     1141 gcggcaacat ctacctcgcc aaggtgacgc gcgtagagcc gtcgctgcag gccgccttca
     1201 tcgagtatgg cggcaatcgc cacggcttcc tcgccttcag cgaaatccac cctgactact
     1261 accagatccc ggtcgccgac cgcgaagcgc tgatgcgcga cgaggaagag gccgagcgcg
     1321 aggaccacga cgattccgac tcgatgcccg ccgaagcgcc gcgccgcgcc tcggtgagcg
     1381 aagaggccga gaccatcgac gccgacgcgc agacgccgaa tgcgtcgacc gaagcggaag
     1441 ccgaggccga cccgcaatcg tccgaggcgg cggacgacga tgaggccggt tccggccgca
     1501 acgacggcag tcacatcgag gaagcgccgg ccagcaacga gccggtcgag tcgctgggcg
     1561 gcggcggatc cgacatcctc gaggaaagcc gcgagcgccg gcagcgcgcg ccgcgccggc
     1621 atgcctacaa gatccaggaa gtgatcaagc gccggcaggt gatgctggtg caggtcgtca
     1681 aggaagagcg cggcaacaag ggcgcggcgc tcaccaccta tctcagcctc gccggccgct
     1741 attcggtgct gatgcccaac accgcccggg gcggcggcat ctcgcgcaag atcaccaacg
     1801 ccgccgaccg caagcggctc aaggacatcg tcggcgatct cgaagtgccg cagggccagg
     1861 ggatcatcct gcgcaccgcg ggcgcctcgc gcaccaaggc cgaggtgaag cgcgacttcg
     1921 aatatctgca gcggctgtgg gaaagcgtgc ggacgctcac cctgcagtcc accgccccct
     1981 gcctcgtcta cgaggagggc tcgctgatca agcgcaccat ccgcgatctt tattccaagg
     2041 atatcgacga gctctgggtc gccggcgacg acgcctaccg cgaagccaag gacttcatgc
     2101 ggatgatcat gccgagccac gccaagaacg tcggggtcta caaggacgac cagccgctgt
     2161 tctcgaagtt cggcgtcgag ggccagctcg accagatgtt ctcgccgcag gtgacgctgc
     2221 cctccggcgg ctacctcgtg atcaatccga ccgaggcgct ggtctcgatc gacgtcaact
     2281 cgggccgctc caccaaggag cacaacatcg aggacacggc gctgcagacc aacctcgagg
     2341 cggccgagga agtctcgcgg cagcttcggc tgcgcgatct cgccggcctc atcgtcatcg
     2401 acttcatcga catggtcgag aaccgttcca accgggcggt ggagcgcaag ctcaaggatt
     2461 cgctgaagaa cgaccgggcc cgcatccagg tcggccggat cagccatttc ggcctgatgg
     2521 agatgagccg gcagcgcatc cgcttcggcg tggtcgagag ctcgacccac aaatgcccga
     2581 cctgcaacgg caccggcctc gtccgctcgg tcgagagcgt ggcgctgatg gtgatgcgca
     2641 atgtcgagga ccatgtgctg aagaagccgg gccagtcgat caacgtgcgc gtcccggtcg
     2701 acgtcgccct ctacatcctc aactccaagc gcggcacgct gtcgacgctg gagatgaaga
     2761 acgggctgtc gatcaccatc gtcgccgacg accatgtcgg gctgcagcat tacgtcatcg
     2821 agaagggcga accgcggatt gccaccggcg acctgccgcc gccggcgcat gtgcgcgtcg
     2881 acaccgccgc gatcgaggaa gccgacgagc ccgtggtcgc cgaggacgag gaggacgaag
     2941 agccctccga agccgaggcc gaagccggcg cgccggcacg agcggatgaa actggcgacc
     3001 gccagggtcg gggacgccgc cggcgtcgcc gcggcgggcg cgatcgcgac gagcgcgagc
     3061 cgcgtcccga gcggcagccg gcgccggtcg ccgccgcggc gtctccggaa gagccggccg
     3121 acgacgatga cggcgagccg gatggcgatg cggcgccgca ggccgatggc ccgcgcgacg
     3181 aaaatggcga gccccgccgg cgtcgccgcc gcggtcgccg tggcggtcgc cgcaatcgcc
     3241 gcgagggcga ggagaatggc gcccagccgg acgtcgtggc cgagcccgcc gccaacggca
     3301 tgagcgagga gtccaccgaa cgcgtcgtcg ccgcggtact ggcgcaggat gccatcgccg
     3361 ccgatgccgg catcgagccc gacatcagcg tcgtgccggc ggcagagggt gcggaaaagc
     3421 cccgccgcgc ccggcgcagc cgcaagtccg ccgatgcgga tgccgcggtg caggatgccg
     3481 tcgcgcagga tgctgtcccc gaaggcgaga acccggcccg gccgcgcagc cgttcgcgca
     3541 agccgcgagc cgaaccgcca accgaggaac aggcgctccg ctcggccgag gccattgcgg
     3601 tcatgccggc ggcagcgccg gaacctgccg ccactgccgc accggcgccc accgtcgacg
     3661 aggcgccacg gcgcgccagg aaagagctgc cggccgacga gatcgtggtc agctcgtcat
     3721 cggccccggc cgacgacggc gccaagccga agcgggccgg ctggtggcag cgcggcttct
     3781 tcggaagctg aacccataaa gggcggcccg gtgccgccct tttccttttg cgcgcggctg
     3841 gtctagcctc agggcatgtc tcgtaccgaa cgcctgctcg agctcctgca gatgctgcgt
     3901 cgccaccgcg ccccggtgac cggctcggcg ctcgccgggg agctcggcgt gtccatccgc
     3961 acggtctatc gcgacatcgc gacgctgcag ggacagggtg ccgaaatcga gggcgaaccg
     4021 gggctcggct acgtgctcaa gcccggtttc atgctgccgc cgctgatgtt ctcgatcgac
     4081 gagctcgagg cgctggtgct cggcggcgcg tgggtcggcc ggcagaccga cgatcctcgc
     4141 ctgagccggg cggcgggcaa cgcgctggcc aagatctccg ccgtgctgcc ggccgagctg
     4201 cgccgcgagg tcgaggctgg aacgacgttc gtggtgccac gccggatcga gccggtgcag
     4261 atcgatccgt cgctgctgcg cgacgccatc cgcaaggaac tgaagctgcg gatcggctac
     4321 cacgacgatc tcggccgcgc gaccgaccgg gtcgtctggc cgttcatcat cggctttttc
     4381 gaacagcgca aggtggtgag cgcctggtgc gagctgcgca acgactatcg gcacttccgc
     4441 atcgaccgca tcgcctcgct cgccgccacc ggcgagcgga tgccccgccg ccgccacgcg
     4501 ctcctcaagg agtggcgcga gcggatggac gccgagcggt cgcgccgcca gcctgctgcc
     4561 gaaaactgac agtggagcgg tccatcgaag cgtcattcca acacggagtg acgccatgac
     4621 cagcccgaac ttcatcctcg cctacgtcgc cgatgcgccc aggagtgccg ccctctattc
     4681 ccggctgctc ggcgcacagc cggtcgaatc ctcgcccagc tgggcgatgt tcgccttccc
     4741 caacgggctc gcgctcggcc tctggtcgcg cagcgacgtc gagcccaagg ccaccctccc
     4801 cggcggcagc gaaatcggtt ttccggttgc caatgacgat gccgtcaccc agacccgcga
     4861 cgcctgggcc gggctcggcc tcaagatcct gcaggagccg acgcggatgg atttcggcta
     4921 caccttcacc gccgccgatc ccgacggcca ccgcctgcgg gtgttcgctc cggcggcgcg
     4981 ctgacggcgc cctcgccctc cggcgcctcg agctgttcct tgagccgccg cacctgcgct
     5041 tcgagccgca ggttgtgggc ctgcagctgg cggatgcgcg actgcgccgc ctcgagatag
     5101 tcgatgccga tctcggaccg cttcttggca gcggcggtgc gcgccgccgc cgccgccttg
     5161 ccgtcgatca cgtcgcgcca gctgagctcg tgcttcttga cgaacgccgc cgcggccttg
     5221 gctgcagcgg cgcgttcgcc ggcatgctcg gacgccagca ggccgaggat ccggtcgagg
     5281 cgggcgagat ccctctgttg aatttcggcc tcccggtgcc gctagcgcct gaggaacgcg
     5341 cccagccgct ccagcgcctt gtcgatggtc tcgcggctgc cggcgtagga gaagcggacg
     5401 aagcggttgc cgttggtgcg gtcgaaatcg atgcccggcg tcgccgccac gcccgcaacc
     5461 gtcagcagct cgtggcagaa cgccagcgag tcgttggtga agcgaccgac gtcggcgtag
     5521 gcgtagaacg cgccgtcgct ctcgtccacc ggcaggccga ggctcgcgag ccccgccgtc
     5581 agcagcggcc ggttggcggc atagtgggcc ttctgcgcct cggaataatc gcgctcgccc
     5641 agcgccacca ccgccgccgt ctggctcaat gtcggcgccg cgatgaacat gttctgctgc
     5701 aggatctggg tgcggcgcag cacatcgtcg ggcagcacca tccagccgat ccgccagccg
     5761 gtcatgcagt aatatttgga gaagctgttg atgacgatgg cgtcgcgcgt cagctccagc
     5821 gcgctgaccg aggggccgcg atagtcgagg ccgtgataga tttcgtcgga gatcagccgc
     5881 accccgagcc tggcgcaggc agcgacgatt tcggccagct ccgcacgggt caccccggcg
     5941 ccggtcggat tggccggcga ggcgaacagc aggccgtcga atttttcccg cgcataggcg
     6001 gcctcgatgt cggccgcggt cagccgccag ccctgccggc cgctgacggg gatttcgacc
     6061 gcccggtagc caagccctat tagcgtattg aggtaagccg gataccccgg ccgcgtcacg
     6121 gcgatggtcg gcggtcgctc gaagccgccg gcaaaggcca ggatgaaggc cgaggacgac
     6181 cccatggtgg cgacgatcga gtccggcgca acggtgacgc ggtgctgctc ggcatagtag
     6241 cgggccagcg cctcccgcag cttcggctgg ccggcaaagt gcgtgtagtg ctgcgggctg
     6301 gcgagggccg cgcgcgccgc ctcgagcact cttggcgccg gcggcgcggc tggctggccc
     6361 tgctcgagaa agcagatgtc gtggccgtcg gcttcgagcc cgcgcgccag cgcattgatc
     6421 tcgagcccat gaaagggcgc gaggccttcc gtcgccgcag ccgtcataac ttcgtcgcct
     6481 tcgccgtcga tcaccccgtt cgcctagccc tccgcggcga atgtctcaac tgaatttgat
     6541 ccttttggcg cggccgggcg cgccgccgca tgctaagtct ctgccgccac ggccttcgga
     6601 gcgtccatgt cgcgtctcag catcgtcctc gtccttttgg tcggcctgct cgccggcggc
     6661 ctcggcgtct cgctgctgcg tccgcaggcg cccgggctcg gcgacagcga cgtgcgcgcc
     6721 atcgttgccg aaatgcaggc caggacggcc atgcccgcgc cgtcgatggc gatgggcgac
     6781 gccgatgccg gcaaggtcga caagctggtg caggatttcc tgatgggcaa tccgatgatc
     6841 ctcgaccaga tgaacgccaa gctcagcgcg cagaaggaag tcgcccagcg gcaggccgaa
     6901 aaggacgtga tcgacgccaa caaggcgcag atctacgacg cggccgacaa tgtcgtgctc
     6961 ggcaatccca agggcgacgt caccctggtc gagatgttcg actacaactg cacctactgc
     7021 cgcggcgccc tgcccgacct ggcgcagctg atgaccgacg accacaacct ccgcgtcatc
     7081 ctcaagcagt tcccgatcct gagttcgggc tcggtggacg cagcgcgagt ggcgctgctg
     7141 gtcgccaagg accccaagat cgactactgg caattccacc agaagctgtt cgccgagcgc
     7201 ggcgaggttg gcgcggcgca ggcgctcgac gtcgccgcgt cgctgggcgg caaccgggtc
     7261 gagctgatgc tcgacatgaa cgccaaggcg ccgaacgacg tgctccaggc caattacgac
     7321 ctcgccaagt cgctcaacgc caccggcacg cccacctaca tcctgggcga cgagatgatc
     7381 ccgggtgcca tgccgatcga ccagctcaag cagaagatcg ccaatctgcg gacctgcggc
     7441 agcaccgagt gccccgtgca aatgcccgcc agcccggccg gctgagccgg attctcgtgc
     7501 aataatggcg gccgcggctt gcgccagtcg cctcgcgcgg gcacaaggcg aggaccatgc
     7561 ccaagcgcat cctcgtcatc aacggcccca acctcaacat gctgggcatc cgcgagccca
     7621 agacctacgg cacgcagacg ctcgccgaca tcgaggccat gtgcaaggcc gagggcaaga
     7681 cgctggggct gacggtcgag tgccggcaga gcaaccgcga aggcgaaatc tgcgagtgga
     7741 tccaggaggc ctacggaaaa aaggacggca tcgtcctcaa tccggccggc tattcgcaca
     7801 cctcggtcgc catccgcgac gccatcgccg cggtgggcat cccgaccatc gaggtgcatc
     7861 tcagcaatat tcacgcgcgc gaggaattcc gccacttttc ctatgtctct gcggtcgcgg
     7921 cgggggtcat ttgcggcctc ggcgcggcgg ggtataggct ggcgctggtg gcgctcgccg
     7981 agcggctcgg cgcctgagcc ggccccaaga agaacacttg cccaagggag gcagacccat
     8041 gcccaaggac gtccccgccg atcagcaact gatccgcgcc atcgccgagc tcctcaacga
     8101 gcagaacctg gccgagatcg agatcgagcg ggaagacctg cgggttcgcg tcacccggtc
     8161 ctacgccgcc accggcgtgc agcaggtgat gctgccggct gcggcaccag cggctgcagc
     8221 cgccgcgccc accgcgcccc agggttcggc ctcggccgcc aaatcgccgg ccgaagacct
     8281 cgcgtccaat ccgggcaccc tcacctcgcc gatggtgggc acggcctatc tctcgccgga
     8341 gccgggcaag ccggtgttcg tcgccgtcgg cagccgcgtg accgaaggcc agaccatcct
     8401 catcatcgag gcgatgaaaa cgatgaacca gataccggcg cacaaatccg gcacggtgtc
     8461 gcgcatcctc gtcgccgaca cttcgccggt cgaatacggg cagccgctcg cggtcatcga
     8521 ctgatgttcc agaaggttct catcgccaac cggggcgaga tcgcgctgcg cgtgctgcgg
     8581 gcgtgcaagg agctcggcat ctcgacggtc gcggtctatt cgaccgccga ccgcaacgcc
     8641 atgcacgtgc gcatggccga cgagagcgtc tgcatcgggc cgccgcccgc ccgcgacagc
     8701 tatctcaaca tcccctcgat cctcgccgcc tgcgagatca ccggcgccga cgccgtgcat
     8761 ccgggctacg gttttctcag cgagaacgcg cgcttcgccc gcatcctcag cgagcacaag
     8821 atcaccttca tcggcccgtc cgagcaccac atcgagatca tgggcgacaa gatcaccgcc
     8881 aagaagacgg cggtcgagct cggcatcccg gtggtcccgg gctccgatgg cgaggtgaag
     8941 acggcggaag aagcgcagaa gctggcgaaa aagatcggct atccggtgat cgtcaaggcg
     9001 accgccggcg gcggcggtcg cggcatgaaa gtcgccaaca acgacgagga gatgtccatt
     9061 gccatctcca ctgcgcgcac cgaagccaag gcggcattcg gcaacgacag cgtctatatc
     9121 gaaaaatacc tgcagcagcc gcgccacatc gaaatccagg tgatgggcga cggccagggc
     9181 aatgcggtgc acctcggcac ccgcgactgt tcgctgcagc gccgccacca gaaggtctgg
     9241 gaagaggcga cggcgccaac cgtctcgccc gagcagcgcg ccaagatcgg cgagacctgc
     9301 gcggcggcca tgcgcaagct caaatactcg ggcgccggca ccatcgagtt cctctacgag
     9361 aacggcgagt tctacttcat cgagatgaac acccggctgc aggtcgagca cccggtcacc
     9421 gagcgggtca ccggcgtcga cctcgtctat gagcagatcc gcgttgcgtc gggcgaggtc
     9481 ctaagcctca ggcaggacga gatcaccttc accggccacg ccatcgaggt gcgcatcaac
     9541 gccgaggatc cgcagacctt cgcgccctcg cccggcctca tcaaattcta tcatccggcc
     9601 ggcggcgtcg gcgtgcgcat cgatagcgcc atctacagcg gctacacgat cccgccctac
     9661 tacgacagcc tgatcggcaa gctcatcgtc tacggccgca cccgcgagga gtgcctgatg
     9721 cggctgcgtc gcgccatcga cgagttcgtg gtcgacggca tcaagaccac cctgccgctg
     9781 ttccagcgcc tgatccggga acccgacatc ctcgccggca actacgacat ccactggctg
     9841 gagcaattcc tggcggcgaa caaggcctga tcgcaggccg gggcgtcacg gtgcggcggc
     9901 accgggcggc cgacgcaccg gccgacggtc accccgttcg tgggccgcgg tcctatctgc
     9961 agattctcag gtctcgagag tttccggaac cgggaaacgg cgacatggtc gccacgctgc
    10021 ctttgctctc cgagcggcaa gccggcacgc gccgacctgt cgaaggatgc cggattgccc
    10081 gccgccatcg acgaggccgc tgcggcgcgc gacaagctga aagcgagctt ctaaacctta
    10141 ccccagcgac ctgagatact gcgccggctt ggtgctcagc gcgctccacg tcgtcgcggc
    10201 gccggtgacg atcgtcagga ggatcgagcc gatcagcacg ccgaggatca gcgtcgggtt
    10261 gacgccgaag ccgacgtcca tcttggcgcc cttg
//
LOCUS       DATAZA010000091         7691 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_354991, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000091 DATAZA010000000
VERSION     DATAZA010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 7691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7691
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_354991"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1246
                     /locus_tag="VHZ56_02285"
     CDS             <1..1246
                     /locus_tag="VHZ56_02285"
                     /inference="COORDINATES: protein motif:HMM:TIGR03808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TIGR03808 family TAT-translocated repetitive
                     protein"
                     /protein_id="HEX4296827.1"
                     /translation="AEFGLDPNDGGDQSEKLQAAFDAAAGDGRLLLLPAGSFTVGNLE
                     IADGVQVIGIRGRTLLKSSGSTRLGHIAKATGITIEGVTFAASALDSAAGVNGLVEVE
                     DSTGVTFRQCTFRNSGANGIAANGSAVTVEDCDFAAMAAAAIHSQNGQGLMIRGNRIS
                     DCGNAGIRIWRDDAGPDGSIVSGNRIGKIDFTDGGNGQNGNGVSIYKANGVIVSDNVI
                     DGCAFSAVRVNSGNDTQIRGNTCTNSGEVAIFSEFAFSGSVIADNVVDGAATGISITN
                     LDQGGHLATCTGNIVRNIADHSANNPDTRPVGIYAEADTVVANNTVDTVPGIGIVAGY
                     GPYVRNVVVSDNVVTGAQTGIAVSVVQDKSPGPVRVSGNIVGAGTQHGIVGMEWDKIV
                     SDDLGKDAGRYPNVTVADNTVS"
     gene            complement(1239..2258)
                     /locus_tag="VHZ56_02290"
     CDS             complement(1239..2258)
                     /locus_tag="VHZ56_02290"
                     /inference="COORDINATES: protein motif:HMM:NF017864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEX4296828.1"
                     /translation="MDANPILAETVRGNWVENRHRGAFVVADSDGNIIASAGDIDRPV
                     FPRSAVKSMQALALVTSGAIEKFELADEELALACASHQGEDFHVAGVTAFLDHLGLGL
                     SDLECGAHAPSFGPAREKLRDSGQPPSAVHNNCSGKHSGMLAVAEALGVPTARYVDRD
                     HPVQQEVRSGIETVLHEPLNTDRCGTDGCSIPTWAAPLRLFASGFARMATGEGLPPDL
                     ARGAKRIFDAATSHPELVGGTGSLDTEVMRAFGGRLMQKGGAEGVQCGAVRDKGWGYA
                     LKVDDGNMAASHAMVATLLLAIADPDEAQQHILKRFAVQVLRNVRGLDVGLIKATAAM
                     LPKVS"
     gene            complement(2356..2523)
                     /locus_tag="VHZ56_02295"
     CDS             complement(2356..2523)
                     /locus_tag="VHZ56_02295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296829.1"
                     /translation="MKRTNEKLLVAVLAGVIIAGAAAYAIQPSLGGIGAAAPSATPTS
                     AVLTLRLSDKA"
     gene            2692..3549
                     /locus_tag="VHZ56_02300"
     CDS             2692..3549
                     /locus_tag="VHZ56_02300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018328829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX4296830.1"
                     /translation="MAKVIVTGGSGKLGRAVLKDLVANGYEVLNLDQNPARDGICPTV
                     RIDLTQFGEVAAALLSGVDERKGPFDAVVHLAAIPAPGLFANARTFANNVPSTYNVFE
                     AARLAGIKTVVFASSETVLGLPFDTPPPYAPVDEEYYPRPESAYSLGKLVDETMARQF
                     ARWDPELKIAGLRFSNVMDIEDYKAFPGFDGDPKKRKWNLWGYIDARDGAQAVRKAIE
                     ADFKGFEAFIIANADTVMSRANASLMAEVFPGVETRPNMSATGTLLSIEKAKRLLDYN
                     PQHSWRNHV"
     gene            complement(3571..4965)
                     /locus_tag="VHZ56_02305"
     CDS             complement(3571..4965)
                     /locus_tag="VHZ56_02305"
                     /inference="COORDINATES: protein motif:HMM:NF006631.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AtzE family amidohydrolase"
                     /protein_id="HEX4296831.1"
                     /translation="MKSTAGVAEIAKAVQSGEATAHSAVVAALGRIEANNARLGAFTA
                     VLRDRAMARAESVDAMVRDGRKLPLAGVPFAVKNLYDLADLPTRAGAKLRANAPTARA
                     DAALVARLEAAGAVCLGALNMDEFAYGFTGENAHDGPAHNPHDLGHMTGGSSSGPAAA
                     VAGGLVPVALGSDTNGSIRVPASLCGLFGLKPTYGRLSRRGMYPFVASFDHPGALARS
                     VEDLALAYDALQGFDDSDPAMVKRPSEPISGRLERGSAGLRIAVADGYFAGDAEPRAV
                     VEHVATALKLTAHISVPDVQAARSAAFLITMVEGAGLHLDRLRDHPQDFDPEVRDRLL
                     AGALLPAAWVERAQRFRRVFRDAVLALLNDLDAIVTPATPMRAPKLGQKTALLGGVEM
                     PIRPNLGIFTQPFSFIGLPAVTVPVWLDGHRLPLGVQVVTAPWREDIALRIARQLEKT
                     GTARAPVARGFADE"
     gene            complement(4962..5150)
                     /locus_tag="VHZ56_02310"
     CDS             complement(4962..5150)
                     /locus_tag="VHZ56_02310"
                     /inference="COORDINATES: protein motif:HMM:NF024714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4089 domain-containing protein"
                     /protein_id="HEX4296832.1"
                     /translation="MAVRLPDFDHWIDAMAPVLRLDIAPEHRPGVKANLKTAAKMAAL
                     LEKVPLDDDVKPAPVYRA"
     gene            complement(5315..5391)
                     /locus_tag="VHZ56_02315"
     tRNA            complement(5315..5391)
                     /locus_tag="VHZ56_02315"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5355..5357),aa:Pro,seq:cgg)
     gene            5527..5601
                     /locus_tag="VHZ56_02320"
     tRNA            5527..5601
                     /locus_tag="VHZ56_02320"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5559..5561,aa:Gln,seq:ttg)
     gene            complement(5624..6238)
                     /locus_tag="VHZ56_02325"
     CDS             complement(5624..6238)
                     /locus_tag="VHZ56_02325"
                     /inference="COORDINATES: protein motif:HMM:NF014669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HEX4296833.1"
                     /translation="MAVTLTTPNTLLGALEPKTSTERLLSNVAVVLIGTLLITAAAKI
                     NVPTWPVPVTLQTFAVALLAAAFGWRVGVATVVAYLVEGAIGVPVFATGGGMGYLVGP
                     TGGFLLGFIPMAYIIGRATDLGGSSRVLMLVLAMLIGDVLLFVFGYAWLLALGSNAAW
                     LDQSDLLGSAFAKAVQPFIVWDILKMVFAALTVSGLWAAVRKRT"
     gene            6300..7217
                     /locus_tag="VHZ56_02330"
     CDS             6300..7217
                     /locus_tag="VHZ56_02330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX4296834.1"
                     /translation="MADTPPPLVFDTRFDARTGHPVAVLPKVVRLTAPNPSPYTFTGT
                     NSFILGDRRVAVLDPGPDDAGHRAALLAAIGGRPVDAIVLTHTHRDHSAGAAALQAAT
                     GAPLWFGGRHRLSRPLQPGESNPLAADCDWELVPDRVLADGEAFPAGDLELVAVATPG
                     HCANHMCYGLAGTDWLLSGDHVMGWNSTLVAVPDGSMADYLGSLRKLLALPFLHYLPA
                     HGGPIDNGPAYARALLAHRELRNRQVVEAVRRGATTIDALLQAIYPMLSPKLRLAAAL
                     TLRAHIEYLADRGEVRLTATQPEMRLAPG"
     gene            complement(7214..>7691)
                     /locus_tag="VHZ56_02335"
     CDS             complement(7214..>7691)
                     /locus_tag="VHZ56_02335"
                     /inference="COORDINATES: protein motif:HMM:NF019032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1499 domain-containing protein"
                     /protein_id="HEX4296835.1"
                     /translation="TDFDAPPPLVSFVESRFIGPGERARIEAAYPNARSRNYPVDAVQ
                     MFGVVSDLLDSRGWEVRARREPQSPMDTGELNVIAANILGFRQEIVIRVAGAADGSTV
                     AMRSASLFDFPDFGNNGRRIEDFLLDLDTQVTDALRNAPGQPADNADANDSADADN"
BASE COUNT         1263 a         2384 c         2937 g         1107 t
ORIGIN      
        1 ggcggagttc gggctcgatc cgaatgacgg cggcgaccag agcgagaagc tgcaggcggc
       61 gttcgatgcg gcagccgggg acggacggct gctgctgctg ccggccggaa gtttcacggt
      121 gggcaacctc gagatagcgg acggggtgca ggtcatcggc atccggggac ggacactcct
      181 taagtcgtcg ggatcgacgc ggctcggcca catcgccaag gcgaccggga tcaccatcga
      241 aggcgtgacg tttgcggcca gtgcgctgga cagcgcggcc ggcgtcaacg gcctggtcga
      301 ggtcgaggac agcactgggg tgacgttccg gcaatgcacg tttcgcaact cgggggcgaa
      361 cggcatcgca gccaacggct cggcggtgac ggtcgaggac tgcgacttcg cggcgatggc
      421 ggccgcggca atccattcgc agaacggcca ggggctgatg atccgcggca accgcatcag
      481 cgattgcggc aatgccggca tccggatctg gcgggacgat gcggggccgg atggctcgat
      541 cgtttccggc aaccgcatcg gcaagatcga cttcaccgac ggcggcaacg ggcagaacgg
      601 caatggagtg tcgatctaca aagccaacgg cgtgatcgtc agcgacaatg tcatcgatgg
      661 ctgcgcgttc tcggcggtgc gcgtcaactc ggggaacgac acgcagatcc gcggcaacac
      721 ctgcacgaac tcgggcgagg tcgcgatctt ctcggaattc gcattctccg gttcggtgat
      781 tgccgacaat gtggtcgacg gcgcggcgac cggcatttcg atcaccaatc tcgaccaggg
      841 cgggcacctc gcgacctgca ccggcaacat cgtacgcaac attgccgacc attcggcgaa
      901 caatccggac acaaggccgg tcggcatcta cgccgaggcg gatacggtgg tcgcgaacaa
      961 cactgtcgac accgtgccgg gcatcggcat cgtcgcgggg tacgggccgt atgtgcgcaa
     1021 cgtggtggtg agcgacaacg tcgtcacggg cgcgcagacc ggcatcgcgg tgagcgtggt
     1081 gcaggacaaa tcgccgggac cggtgcgggt cagcggcaac atcgtcggcg ccggcacgca
     1141 gcacggcatc gtcggcatgg aatgggacaa gatcgtcagc gacgatctcg gcaaggatgc
     1201 cgggcgctac ccgaacgtga cggtggcgga caatacggtc agctgacctt cggcagcatg
     1261 gcggcggtgg ccttgatcag gccgacgtcg aggccgcgca cgttgcgcag gacctggacg
     1321 gcgaagcgct tgaggatgtg ctgctgggct tcgtcgggat cggcgatggc gaggaggagc
     1381 gtcgccacca tggcatgcga ggcggccatg ttgccgtcgt cgaccttgag cgcatagccc
     1441 cagcccttgt cgcgcacggc gccgcactgg acgccctcgg cgccgccctt ctgcatcagg
     1501 cgaccgccga aggcgcgcat cacctcggtg tcgaggctgc cagtgccgcc gaccagctcg
     1561 gggtgtgaag tggcggcatc gaagatgcgc ttggcgccgc gggccaagtc cggcggcagc
     1621 ccctcgcccg tcgccatgcg ggcgaacccg gacgcgaaca ggcgaagcgg cgcggcccag
     1681 gtggggatgg agcagccgtc ggtgccgcag cggtcggtgt tgagcggctc gtgcaacacg
     1741 gtttcgatgc cggagcggac ttcctgctgc accgggtggt cgcggtcgac atagcgggcg
     1801 gtgggcacgc ccagcgcctc ggcgacggcg agcatgcctg agtgcttgcc cgagcagttg
     1861 ttgtggacgg cggaaggcgg ctggccgctg tcgcggagct tttcgcgcgc cgggccaaag
     1921 ctcggggcat gggcgccgca ctcgaggtcg gagaggccga ggccgagatg atcgaggaaa
     1981 gcggtgacgc cggcgacgtg aaagtcctcg ccctggtgcg aggcgcaggc gagggcgagt
     2041 tcctcgtcgg cgagctcgaa cttttcgatg gcaccggagg tgacgagcgc gagcgcctgc
     2101 atcgacttca ccgccgagcg cgggaagacc gggcgatcga tatcgccggc cgaggcgatg
     2161 atgttgccat cggaatcggc gacgacgaag gcgccgcgat ggcggttctc cacccagttg
     2221 ccgcggaccg tctcggcgag gatcgggttg gcatccatga aaaatcggcc tccgtgttac
     2281 ccttgggata acaggaggcc ggaaaagtca ccagaggagg tcagggccgc tgcatgacgg
     2341 ccggaaggaa cgaactcagg ccttgtcgga gagccggaga gtgaggaccg cggaggtggg
     2401 cgtggcggat ggcgcggcgg caccgatgcc accaagcgag ggctggatcg cgtaagcggc
     2461 ggcgccggcg atgatcacgc ccgcgagcac ggcaaccagc agtttttcgt tggtcctctt
     2521 catctcgatc tccatcgggt ccgagttcga tgcggcggtt ctaggggcat gggattgaat
     2581 gccggctgag atggccgttc agtttccgtt cattggacga acggcgcggc ggagcgcccg
     2641 gcttgcctgt tcagaccgcc gatggaatga tccggccaac aggaggacgg catggcaaaa
     2701 gtgatcgtga ccggcggcag cggcaagctc gggcgcgcgg tgctcaagga cctcgtggcg
     2761 aacggctacg aggtgctcaa cctcgaccag aacccggcgc gcgacggcat ctgcccgacg
     2821 gtgcggatcg acctcacgca attcggggaa gtggcggcgg cgctgctgag cggagtggac
     2881 gagcgcaagg ggccgttcga cgcggtggtg cacctcgcgg cgatcccggc accggggctg
     2941 ttcgccaacg cgcggacctt cgccaacaac gtgccgtcga cctacaatgt gttcgaggcg
     3001 gcgcggctcg ccgggatcaa aacggtggtg ttcgcctcga gcgagacggt gctgggactg
     3061 ccgttcgaca cgccgccgcc ctatgcgccg gtggacgaag agtattatcc gcgaccggaa
     3121 agcgcctatt cgctgggcaa gctggtggac gagacgatgg cgcggcagtt cgcgcgctgg
     3181 gatccggagc tgaagattgc cgggctgcgg ttctccaacg tgatggacat cgaggactac
     3241 aaggcgttcc cggggttcga cggcgacccg aagaagcgca agtggaacct ctgggggtac
     3301 atcgatgccc gcgacggggc gcaggcggtg cgcaaggcga tcgaagcgga cttcaagggc
     3361 ttcgaggcgt tcatcatcgc caacgccgac acggtgatga gccgggccaa cgcctcgctg
     3421 atggccgagg tgttccccgg cgtcgagacg cggccgaaca tgtcggcgac ggggacgctg
     3481 ctgtcgatcg aaaaggccaa gcggctgctc gactacaacc cgcagcacag ctggcggaac
     3541 cacgtctaga ggcagtcgca ggcgcctgcg ctactcgtcg gcgaagcccc tggcgacggg
     3601 ggcccgcgcg gtgccggtct tttcgagctg gcgggcgatg cggagcgcga tgtcctcgcg
     3661 ccagggggcg gtgaccacct gcacgccgag cggcagccgg tggccgtcga gccagaccgg
     3721 gacggtgacc gccggcaggc cgatgaacga gaacggctgg gtgaagatgc cgaggttggg
     3781 gcggatcggc atctcgacgc cgccgagcag cgcggttttc tggccgagct tcggggcgcg
     3841 catcggggtg gcgggcgtga cgatggcgtc gaggtcgttg agcagcgcca gcactgcatc
     3901 gcggaagacg cgtcggaagc gctgcgcgcg ctcgacccag gcggccggca gcagggcccc
     3961 ggccagcagg cggtcgcgga cctcgggatc gaagtcctgc gggtggtcgc ggagccggtc
     4021 gagatggagg ccggcgccct cgaccatggt gatgaggaag gccgccgagc gcgccgcctg
     4081 gacgtcgggg acgctgatgt gggcggtcag cttgagggcg gtggcgacgt gctcgacgac
     4141 ggcacgcggc tcggcgtcgc cggcgaagta gccgtcggca acggcgatgc ggaggccggc
     4201 agaaccgcgt tccagccggc ccgagatcgg ctcggacggg cgcttgacca tggccggatc
     4261 ggagtcgtcg aagccctgca gcgcgtcgta ggcgagcgcc agatcctcga ccgagcgggc
     4321 gagcgcaccg ggatggtcga aactggcgac gaacgggtac atgccgcgcc ggctcagccg
     4381 gccgtaggtc ggcttcaggc cgaagaggcc gcacagcgac gccggtacgc ggatcgagcc
     4441 attggtgtcc gagccgaggg cgaccggcac cagcccgccg gcgacggcgg cggcgggccc
     4501 cgacgaggag ccgccggtca tgtggccgag gtcgtgcgga ttgtgagcgg ggccgtcatg
     4561 ggcgttctcg ccggtgaagc cgtaggcgaa ctcgtccatg ttgagggcgc cgaggcagac
     4621 cgcgccggcg gcttcgagcc gggcgacgag ggcggcatcg gcccgggcgg tgggcgcatt
     4681 ggcgcggagt ttggcgccgg cgcgggtcgg cagatcggcg aggtcgtaga gattcttgac
     4741 ggcgaacggg acgccggcga gcggcagctt gcggccgtcg cggaccatgg cgtcgacgct
     4801 ctcggcgcgg gccatggcgc ggtcgcgcag cacggcggtg aaggcgccga ggcgcgcatt
     4861 gttggcttcg atgcggccga gcgcggcgac gacggcgctg tgggcagtcg cctcgccgga
     4921 ttgcacggct ttcgcgatct cggcgacgcc ggccgtcgat ttcatgcgcg gtagaccggg
     4981 gcgggcttga cgtcgtcgtc gagcggaacc ttttcgagca gggccgccat cttggccgcg
     5041 gtcttgaggt tggccttgac gccagggcga tgctcggggg cgatatcgag ccgcagcacc
     5101 ggcgccatgg cgtcgatcca gtgatcgaaa tcgggaagcc ggacggccat ctgctgcgtt
     5161 gcccctaccg cagcggcggc gttgcggccc ggctgcgcgg tgaatggtag cggggatgcg
     5221 gccgggaaag aataggcatc ggcggctctg caagggcaat atcgagcccc agacaggcaa
     5281 aagggccggc ccttgcggaa ccggccctcg atgctggtcg gagtagagtg attcgaacac
     5341 tcgaccccct gctcccgaag caggtgcgct accaggctgc gctatactcc gatagggttc
     5401 cgacggcgtg ccaaggcccg gaatggccgg ggttataacc gcgcccggac ggggtttcaa
     5461 gcgccgatgg ggccgccggg cggcttcgtt gcgccgtccg ggtgaagcgt gtaggaaccg
     5521 cgccgttggg gcgtcgccaa gtggtaaggc agcggttttt ggtaccgcca ttcctaggtt
     5581 cgaatcctag cgccccagcc agtttgcagc ggcagcagcc ggatcaggtg cgcttgcgca
     5641 ccgccgccca gaggccgctg acggtcagcg ccgcgaacac catcttcagg atgtcccaga
     5701 cgatgaaggg ctgcaccgcc ttggcgaagg ccgagccgag caggtcggac tggtcgagcc
     5761 aggcggcgtt ggagccgagc gccaggagcc aggcgtaacc gaagacgaac agcagcacgt
     5821 cgccgatcag catggcgagc accagcatca gcacgcggga cgaaccgccg agatcggtgg
     5881 cgcggccgat gatgtaggcc atggggatga agccgagcag gaagccgccg gtggggccga
     5941 cgaggtagcc catgccgccg ccggtggcga acaccggtac gccgatggcg ccttcgacga
     6001 gataggccac cacggtggcg acgccgacgc gccagccgaa ggcggccgcg agcagcgcca
     6061 cggcgaaggt ctgcagcgtc accggcaccg gccaggtggg cacgttgatc ttggccgcgg
     6121 cggtgatcag cagcgtgccg atgaggacga ccgccacatt gctgagcagg cgctcggtcg
     6181 aggtcttggg ctcgagggcc cccagcagcg tgttgggagt ggtcagcgtg acggccatcg
     6241 ggttaccttt gcgggcgcgg attgttgagc gtttctagtc cgtcgcccct gggagcgcaa
     6301 tggccgacac cccgccgccg ctggtcttcg acacgcgttt cgacgcccgg acgggccatc
     6361 ccgtcgcggt gctgccgaag gtggtgcgac tcaccgcgcc gaaccccagc ccgtacacct
     6421 tcaccggcac caacagcttc atcctcgggg accggcgggt ggcggtgctg gaccccgggc
     6481 cggacgacgc cgggcatcgc gcggcgttgc tggcagcgat cggcggcagg ccggttgatg
     6541 ccatcgtgct gacgcacacg caccgggacc attcggccgg cgccgctgcg ctgcaggcgg
     6601 caaccggagc gccgctgtgg ttcggcgggc ggcaccggct gagccggccg ctgcagccgg
     6661 gggagagcaa tccgctggcc gccgactgcg actgggagct ggtgcccgac cgggtgctgg
     6721 ccgacggcga ggcgttcccg gcgggcgatc tcgagctggt cgcagtggcg acgccggggc
     6781 attgcgccaa ccacatgtgc tacgggctcg cgggcaccga ctggctgctg agcggcgacc
     6841 acgtgatggg gtggaactcc actctggtcg cggtgccgga cgggtcaatg gcggactatc
     6901 tcggatcgct gcgcaagctg ctcgccctgc ccttcctgca ctatctgccg gcgcatggcg
     6961 ggccgatcga caacgggccg gcctatgccc gggcgctgct ggcgcatcgc gagctgcgca
     7021 accggcaggt ggtggaggcc gtgcggcgcg gcgcgacgac gatcgacgcg ctgctgcagg
     7081 cgatctaccc gatgctgtcg cccaagctca ggctggcggc ggcgctgacg ctgcgggcgc
     7141 acatcgaata cctggcggac cgcggcgagg tgcggctgac ggccacgcag ccggagatgc
     7201 ggctggcacc gggctagttg tcggcgtcgg cgctgtcgtt ggcgtcggca ttgtcggccg
     7261 gctggcccgg ggcattgcgc agggcgtcgg tgacctgggt atcgaggtcg agcaggaagt
     7321 cctcgatgcg ccggccgttg ttgccgaaat cgggaaagtc gaagagcgac gcggaacgca
     7381 tggcgacggt cgaaccgtcg gcagcgccgg cgacgcggat gacgatctcc tggcggaagc
     7441 cgaggatgtt cgcggcgatg acgttgagct cgccggtgtc catcggcgac tgcggctcgc
     7501 ggcgggcgcg aacttcccag ccgcggctgt cgagcaggtc ggagacgacg ccgaacatct
     7561 gcacggcgtc gacgggatag ttgcgcgagc gggcattggg ataggcggcc tcgatccggg
     7621 cgcgttcccc cggaccgatg aagcgggatt cgacgaagct caccagcggc ggcggtgcgt
     7681 cgaaatcggt g
//
LOCUS       DATAZA010000092         4015 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3721003, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000092 DATAZA010000000
VERSION     DATAZA010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4015
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3721003"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1094)
                     /locus_tag="VHZ56_02340"
     CDS             complement(<1..1094)
                     /locus_tag="VHZ56_02340"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX4296836.1"
                     /translation="MTTNLSEQFLLDPEVVFLNHGSFGACPRPVFEDYQRWQLKLERQ
                     PVEFLDSRRSLARNLGVARSALARELNADPDNLAQVSNATTGLNVVIQSLPLQPGDEI
                     LTTNHEYGALEKTWAYVTRKTGAKVVAMQVPVPLTSAGQFHDAVAAGFSDRTRVLFLS
                     HITSATALLFPIESLVAEARKRGIFSVIDGAHTPGHIPLDLEAIGADFYAGNCHKWFM
                     SPKGSGFVYCRPEWQSLIDPLVISHGWTEDNKQPGVRGPFGASAFVDEVEMQGTRDPS
                     AWLAVPAALAFRRAHDWWAVSAECRRLAQETAARVRELTGLPALSSPELCAPQMVAMP
                     IPECDTLAIKTALLEQYRIEIPVHEWQGHY"
     gene            complement(1096..1998)
                     /locus_tag="VHZ56_02345"
     CDS             complement(1096..1998)
                     /locus_tag="VHZ56_02345"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4296837.1"
                     /translation="MSEIASAAAPLAKPDMVRQHSPLYYAWRRFVANKSAVGAGIVLL
                     VVVLMAIFARLITSTGPNDQLYLTSALNFPSATHWFGVDDLGRDFFTRIVYGARISLG
                     IGFSAAVFSLVVGLPLGALAGYMGGRVDWVVMRIIELFSVVPPLLAALLLATLTRGGV
                     WAIILIAAVFGWVNVCLLVRAQVKSFREKEFIMAAQALGASPWHIIWRHLIPNSVSPI
                     IVGFVLAIPLAMMLEASLSFLGIGVQPPTPSWGQMINGGLNFMFFYWHMVVFPTAALA
                     LTILSASLLGDGLRDAFDPTLKGR"
     gene            complement(1995..2927)
                     /locus_tag="VHZ56_02350"
     CDS             complement(1995..2927)
                     /locus_tag="VHZ56_02350"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4296838.1"
                     /translation="MTGFIVRRVVSMLVTFVLISIVIFLMMHAIPGGPFDGNEMPLPD
                     NIKARLMATLGLDKPLWEQYLRYMWGVLHLDFGVPFQSPGETVMGLVAHAWVPSIVLG
                     GCGILIGAPIGILLGMAASLRRNSWIDYLASAVATLGLTVPVFVISTLLILVFAVWLK
                     WTPASGWGEPKRWILPILAYAAVPLATYARYARATMLDALNKPFVTVLRAKGLSERRI
                     VFQHVLRNAAIPMVTIFPAMFVGIATGSIFVEAMFRVPGLGAYFVSSINKRDYPLEMA
                     LMLLISGLYSVSYLLADILYAVLNPRIRVEGGNR"
     gene            complement(2924..3859)
                     /locus_tag="VHZ56_02355"
     CDS             complement(2924..3859)
                     /locus_tag="VHZ56_02355"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4296839.1"
                     /translation="MSAPALELRQVSKRYGATAVVDRVDLVVPQRQVVALVGESGSGK
                     TTTGLLALRLVNASGGQVLLDGTDISTLGPAAMKPFRRRMQVVFQDSYASLDPMMTLG
                     EIVAEPLGIHAVGNAAERRETARHWLEKVGLDGSYATRYPHELSGGQRQRVSVARALI
                     LGASVLVADEPTSALDVSVKAQIVNLLQDLQADMGLSLLFISHDLSVVRSLADEVVVM
                     LRGRVVERAPTDRIFAEARHPYTRALLDAVPVVDPAARRRRTFLSAEEITARTPRLRP
                     DEIDPQPLLDTAEPQLVALAGSHYVEAIVAERAVA"
BASE COUNT          715 a         1393 c         1330 g          577 t
ORIGIN      
        1 atgtagtgac cttgccactc gtgcaccgga atctctattc gatactgctc gagcagcgcg
       61 gtcttgatcg ccagcgtgtc gcattcgggg attggcatcg ccaccatctg cggcgcgcac
      121 agctcgggac tcgacagtgc cggcaggccg gtgagttcgc gcacccgcgc cgccgtctcc
      181 tgcgccagcc gccggcactc ggcgctgacc gcccaccagt cgtgcgcccg ccggaacgcc
      241 agtgccgccg gcaccgccag ccacgccgac ggatcgcgcg tcccctgcat ctcgacctcg
      301 tcgacgaagg ccgaggcgcc gaacggcccg cgcacgcccg gctgcttgtt gtcttcggtc
      361 cagccatggc tgatcaccag cggatcgatg agcgactgcc attccggccg gcaatagacg
      421 aagcccgagc ccttcggcga catgaaccat ttgtggcagt tgccggcgta gaaatcggcg
      481 ccgatcgcct cgaggtcgag cgggatgtgg ccgggcgtgt gcgcgccgtc gatgacactg
      541 aagatgccgc gcttccgcgc ctccgcaacc aggctctcga tcggaaacag cagcgccgtc
      601 gccgacgtga tgtggctgag gaacagcacc cgcgtgcgat cgctgaaccc ggcagccacc
      661 gcatcgtgga actgtccggc cgaggtcagc ggcaccggca cctgcatcgc caccaccttg
      721 gcgccggtct tgcgcgtcac gtaggcccag gtcttttcga gcgccccgta ctcatggttc
      781 gtcgtcagga tttcgtcgcc cggctgcagc ggcagcgact ggatgacgac gttgagcccg
      841 gtggtcgcgt tcgacacctg cgcgagattg tcggggtccg cattgagctc gcgcgccagc
      901 gccgaacgag caaccccaag gttgcgggcc aggctgcggc gggagtcgag gaactcgacc
      961 ggctgccgct cgagcttcag ctgccagcgc tggtagtcct cgaacaccgg acgcgggcag
     1021 gccccgaacg aaccgtggtt gaggaacacg acctcgggat cgagcaggaa ctgctcggac
     1081 agattggtgg tcaattcaac gccctttcaa ggtcggatcg aaggcatcgc gcaggccgtc
     1141 gccgagcagc gatgccgaga ggatggtgag cgcgagtgcc gctgtcggga acaccaccat
     1201 gtgccagtag aagaacatga agttcaggcc gccattgatc atctgtcccc agctcggggt
     1261 cggcggctgc accccgatgc cgaggaagct gagcgacgcc tcgagcatca tcgccagcgg
     1321 aatggcgagc acgaagccga cgatgatcgg cgacaccgaa ttggggatga ggtgacgcca
     1381 gatgatgtgc cacggcgaag cgcccagcgc ctgcgcggcc atgatgaatt ccttctcgcg
     1441 gaaggatttg acctgcgccc ggacgagcag gcagacgttc acccagccga acaccgcggc
     1501 gatgaggatg atcgcccaga cgccgccgcg cgtcagcgtc gccagcagca gcgcggcaag
     1561 cagcggcggc accaccgaga acagctcgat gatgcgcatc accacccagt cgacgcggcc
     1621 gcccatgtag cccgcgagcg ccccgagcgg cagcccgacg acgaggctga acaccgccgc
     1681 cgaaaatccg atgccgagcg agatgcgggc gccatagacg atgcgcgtga agaagtcgcg
     1741 tccgaggtcg tcgacgccga accagtgcgt cgccgagggg aagttgaggg cactggtcag
     1801 gtacagctgg tcgttcggcc ccgtcgaggt gatcagccgc gcaaagatcg ccatcagcac
     1861 gacgacgagg agcacgatgc cggccccgac cgccgacttg ttggcgacga accgccgcca
     1921 cgcgtagtag agcgggctgt gctgccgcac catgtccggc ttggcgagcg gcgccgccgc
     1981 cgacgcgatc tcgctcatcg gttgccgcct tccacccgga tgcgcggatt gagcaccgca
     2041 tagaggatgt ccgcgagcag gtaggagacg ctgtagagcc cgctgatcag cagcatcagc
     2101 gccatctcca gcggatagtc gcgcttgttg atcgacgaga cgaaataggc gcccagcccc
     2161 ggcacccgga acatcgcctc gacgaagatc gagccggtgg cgatgcccac gaacatcgcc
     2221 gggaagatcg tgaccatcgg gatcgccgca ttgcgcagca catgctggaa gacgatgcgc
     2281 cgctcgctca gccccttggc gcgaagcacg gtgacgaacg gcttgttcag cgcatcgagc
     2341 atcgtggcgc gggcgtagcg cgcataggtc gccagcggca ccgccgcgta ggcgaggatc
     2401 ggcaggatcc accgcttcgg ctcgccccag ccgctcgccg gcgtccattt gagccacacc
     2461 gcgaacacca ggatcagcag cgtcgagatc acgaacaccg gcacggtcag tcccagcgtt
     2521 gccaccgccg acgcgagata gtcgatccat gagttgcggc ggagcgatgc ggccatgccc
     2581 agcaggatgc cgatcggcgc gccgatgagg atgccgcagc cgcccagcac gatgctggga
     2641 acccaggcat gcgcgaccag ccccatcacg gtttcgcccg ggctctggaa cggcactccg
     2701 aaatcgaggt gcagcacgcc ccacatgtag cgcaggtatt gctcccacag cggcttgtcg
     2761 aggccgaggg tcgccatcag cctggccttg atgttgtccg gcagcggcat ctcgttgccg
     2821 tcgaacggcc cgcccgggat cgcgtgcatc atcaggaaga tgacgatcga gatcagcacg
     2881 aacgtcacca gcatcgaaac cacgcggcgg acgatgaagc cggtcatgcc acggcccttt
     2941 cggcgacgat cgcctcgaca tagtggctgc ccgccagggc caccagttgc ggctcggccg
     3001 tgtcgagcag cggctgcggg tcgatctcgt cgggccgcag ccgtggcgtg cgggcggtga
     3061 tctcctcggc cgacaggaag gtccggcgcc gccgcgccgc cggatcgacc accggcaccg
     3121 cgtcgagcag cgcccgggtg tagggatgcc gcgcctcggc aaagattcga tcggtcggtg
     3181 cccgctcgac cacccggccg cgcagcatca ccaccacctc gtcggcgagc gagcgcacca
     3241 cgctcaaatc gtggctgatg aacagcagcg acagccccat gtccgcctgc aggtcctgca
     3301 gcaggttgac gatctgggcc ttgaccgaca cgtcgagcgc cgaggtcggc tcgtcggcga
     3361 ccagcaccga ggcgccgagg atcagcgccc gcgccaccga cacgcgctgc cgctgccctc
     3421 cggacaattc atgcgggtag cgcgtcgcat agctgccgtc gagcccgacc ttctcgagcc
     3481 agtgccgcgc cgtttcgcga cgctcggcgg cgttgccgac ggcgtggatg cccagcggct
     3541 cggcaacgat ctcgcccagc gtcatcatcg gatcgagcga ggcgtagctg tcctggaaca
     3601 ccacctgcat gcggcgtcgg aacggcttca tcgccgccgg cccgagcgtc gagatgtcgg
     3661 tgccgtcgag caggacctgc ccgccgctgg cattgaccag ccgcagcgcc agcaggcccg
     3721 tcgtggtctt gcccgaacca gattctccaa ccagcgccac cacctgccgt tgcggcacca
     3781 cgagatcgac gcggtcgacc actgcagtcg cgccataccg cttgctgacc tgcctgagct
     3841 cgagcgccgg cgcactcatg cggcgacctt ctccgcctcg acgcggatgc aggccgcgtt
     3901 gcggcccggc gccttggcct cgagcggcgg cacgatctgc cggcattcga gcacggccat
     3961 cgagcagcgc ggatggaacg ggcagccggc cggcggatgc gacggattgg gcgag
//
LOCUS       DATAZA010000093         4426 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_819831, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000093 DATAZA010000000
VERSION     DATAZA010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4426
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_819831"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..367
                     /locus_tag="VHZ56_02360"
     CDS             <1..367
                     /locus_tag="VHZ56_02360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296840.1"
                     /translation="LDYDWTAADGSVRHQSSDFNVSMGIASVANSAECGEGGDIVPVR
                     RDPFELRLDQKGYRIAMPFSGDIAPGFTTRWRIELTAPQTSEHDFQIVLLLSDGRQVA
                     SRPIHLTYFMPPKAVLPTD"
     gene            complement(371..2041)
                     /gene="amrB"
                     /locus_tag="VHZ56_02365"
     CDS             complement(371..2041)
                     /gene="amrB"
                     /locus_tag="VHZ56_02365"
                     /inference="COORDINATES: protein motif:HMM:TIGR04336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system protein B"
                     /protein_id="HEX4296841.1"
                     /translation="MGGREGLRMALVWLLLVAFVPTAGAADNRFLPGLDPAPLLAAID
                     KERPAFTPPAGVTGISVPHHLLAADLIARGFWAASAGHYTTIILISPDHFHKVDKAFG
                     TTREDLKTAFGTVQSDGAGVAALIARDGLVQVLPAVDYEHGLMAIAPFIKHFFPSARV
                     IPLLGSVNASEADWQAMVAMLKPLLGPDTLIVQSTDYSHYRPLPEAITRDQETLSMIA
                     ANDPEGVPPLLQPSHVDSKAAQYIQMTLQRDVFHAFPVVLANRNSVEYGANAGSTTSY
                     VVTAYVRQPADGTVFKYPDQSQYIFGGDVLLGRYFLPALRDPKSWALIRDSVLGITRG
                     TPLIVNLEGVLLDAPVSGVGPGSHAMTTDDAAPMLTALKVAAASLANNHANDLGAEGR
                     AESVTQLDRLGIKPLQHGSVTDFGGFRLLALDFVSGKFVGDAIADPQKLDWVCGLDAA
                     PPLVAFVHWGTEYTSLASDTERGIAATLARCGVTLIVGDHSHQASTAIEPVAGGGAAM
                     VYSLGNLLFDQSSPRGSGTLLELRTFRQGTVAARLIPVPNLFDVTRPQ"
     gene            2116..4158
                     /locus_tag="VHZ56_02370"
     CDS             2116..4158
                     /locus_tag="VHZ56_02370"
                     /inference="COORDINATES: protein motif:HMM:NF014124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RyR domain-containing protein"
                     /protein_id="HEX4296842.1"
                     /translation="MNARRLLLYCGLLLGLAVIGLVLTIGGLQACAPPPLPGDELWTW
                     RQDFATALDLVFRAGSVGCFTGDAAGRLALLLGPRTALVLLVVLVLVLLWETLGRALR
                     LAWFRWRGGHVLLAGTADDLAGLMRRQGRFGGTVFLAPDRGAAVDLARARPFAEITSA
                     GIPRALARRLAHLGAGSAALVAAGTRNDLVNVDIADAALAGPGRGELLLRLESGAVRA
                     LSSHALRQRAERHGRRLVVVSLSHLQTRRGMAAAMSGRYTLDGAPRVHIALCGTGPGL
                     QEVTMEVVRQGFGLETERPLVSILRTGAADFTAGALERLQASEAAAIEASTAFAAITG
                     GLDKSISSIVLDHPPLLAVHCVGDTPAEAEALALRWEEALLRLRQPVPPIIAYAADDR
                     PLGTTGMIRTAAAPDLAAASDVARLMDQRAMAVHAMFLAAQRADRGEHFGTAPAEVEW
                     AQLPETYRDDNRNVADQMDYKLARVRLLSRPGPAVAPLAAGEIEVLAGLAHARWLAAK
                     ALTGWRFGPVRDNQQLLHPDMIPYAELSEGAKQKDRDEVASLAPMAALAGEALLRERR
                     VALTAPLAGSALQRFADNLLASPKAQVPVAVLPLDDAGMLGVAATLAGRGIAIEAVLG
                     EGSFALWRSEAEAPRLASILRAAWRIHVAQGRTARDALAERAGEVGNGEGAIDALV"
     gene            4145..>4426
                     /locus_tag="VHZ56_02375"
     CDS             4145..>4426
                     /locus_tag="VHZ56_02375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296843.1"
                     /translation="MRWSSLLAVAAILLVALLPAAADAASTVTTNHARDSIVQQLGPT
                     RSHALLIGIDQFDDAAVWHGLPGVDKEIKDVGAALEAQGFDIAPESLVGH"
BASE COUNT          607 a         1633 c         1510 g          676 t
ORIGIN      
        1 gctcgactac gactggaccg ccgccgacgg ctcggtccgg caccagagct cggatttcaa
       61 cgtcagcatg ggcatcgcct cggtcgccaa ctccgccgaa tgcggcgagg gcggcgacat
      121 tgtcccggtt cgccgcgatc ccttcgagct caggctcgac cagaagggct accgcatcgc
      181 catgccgttc agcggcgata tcgcgcccgg cttcaccacg cgctggcgca tcgagctcac
      241 cgcgccgcag acctcggagc acgatttcca gatcgtgctg ctgctctccg atggtcgcca
      301 ggtcgcttcg cgcccgatcc acctgacgta tttcatgccg cccaaggcag tcctgccgac
      361 ggactgagct ttactgcggc cgggtgacat cgaagagatt gggaaccggg atcagccgtg
      421 cggccacggt gccctgccgg aaggtccgta gttcgagcag cgttcccgag ccgcgcggcg
      481 agctctggtc gaacagcagg ttgcccagcg aatagaccat cgccgcgccg ccccctgcca
      541 ccggctcgat cgctgtggac gcctggtgcg aatggtcgcc gacgatcagc gttactccgc
      601 accgcgccag tgtcgccgcg atgccgcgct cggtgtcgct cgccagcgaa gtgtattcgg
      661 tgccccagtg cacgaaggcg acgagcggcg gcgccgcgtc gagcccgcag acccagtcga
      721 gcttctgcgg atcggcgatc gcgtcgccga cgaacttgcc cgacacgaaa tcgagcgcca
      781 gcaaccggaa gccgccgaaa tcggtaaccg aaccatgctg cagcggcttg atcccgaggc
      841 ggtccagctg ggtgaccgat tcggcccggc cttcggcgcc gaggtcgttg gcgtgattgt
      901 tggcgaggct cgcggcggcc accttgagcg ccgtgagcat cggcgccgcg tcgtccgtcg
      961 tcatcgcgtg cgagcccggg ccgacaccgc tgaccggcgc gtcgagcagt accccctcga
     1021 ggttgacgat gagcggcgtc ccgcgagtga tccccagcac gctgtcgcgg atcagcgccc
     1081 acgactttgg atcgcgcagc gccggcagga aatagcggcc gagcagcacg tcgccgccaa
     1141 agatgtattg cgactggtcg gggtacttga acaccgttcc atcggccggc tgcctgacat
     1201 aggccgtcac cacatagctg gtggtcgatc cggcattggc gccatattcg accgagttgc
     1261 ggttggccag caccaccgga aacgcgtgga acacgtcgcg ctgcagcgtc atctggatgt
     1321 attgcgccgc cttggaatcg acgtgcgacg gctgcagcag cggcggcacg ccctccggat
     1381 cgttggcggc gatcatcgac agcgtctcct ggtcgcgggt gatcgcctcg ggcagcggcc
     1441 ggtagtgcga atagtcggtc gattgcacga tcagcgtatc gggcccgagc agcggcttca
     1501 gcatcgccac catcgcctgc cagtcggctt cgctggcgtt taccgagccc agcagcggga
     1561 tcacccgggc gctcgggaag aaatgcttga tgaagggcgc gatggccatc aggccgtgct
     1621 cgtagtcgac cgccggcagc acctgcacga ggccgtcgcg cgcgatcagc gccgccacgc
     1681 ctgcgccgtc cgactgcacc gtgccgaacg ccgtcttcag atcttcgcgg gtggtgccga
     1741 acgccttgtc gaccttgtgg aaatggtcgg gcgaaatcag gatgatcgtc gtgtagtgcc
     1801 cggccgacgc cgcccagaag ccgcgggcga tcaggtcggc ggccagcaga tgatgcggca
     1861 cgctgatgcc ggtgaccccg gccggtggcg tgaaggccgg ccgttccttg tcgatcgcgg
     1921 ccagcagcgg ggccggatcg agcccgggca ggaagcgatt gtccgccgcc cccgcggtcg
     1981 gcacgaaggc gaccagcaac agccacacca gcgccatgcg caggccttcg cgccccccca
     2041 tgctcgcctc ccgccgggat ttcacttgct gcccgagcat gccatgttgc ggcccgattg
     2101 ggggaaatct tcgccgtgaa cgcgcgccgg ctcttgctct attgcggcct gctgctgggg
     2161 ctcgccgtca tcggcctggt gctcaccatc ggcggtctgc aggcctgcgc cccgccgccg
     2221 ctgccgggcg acgagctgtg gacctggcgg caggatttcg ccaccgcgct cgacctcgtc
     2281 ttccgtgctg gaagcgttgg ctgcttcacc ggcgatgccg ccggccggct ggccctgctg
     2341 ctcggtccgc gcaccgccct cgtcctgctg gtcgtgctgg tcctggtgct gctgtgggaa
     2401 accctcggcc gcgcgctgcg gctcgcctgg ttccgctggc gcggcggcca cgtgctgctg
     2461 gcgggcactg ccgacgatct cgccggcctg atgcgccggc agggccgctt cggcggcacc
     2521 gtgttcctgg cgccggaccg cggggccgcc gtcgacctcg cgcgcgcccg gccgttcgcc
     2581 gaaattacca gcgccggtat tccccgcgcc ctcgcgcgcc ggctggcgca tctcggcgcc
     2641 ggcagcgcgg cgctggttgc cgccggcacc cgcaacgacc tcgtcaacgt cgacatcgcc
     2701 gacgcggcgc tggccggccc cggtcgcggc gagttgctgc tgcggctcga gagcggcgcc
     2761 gtgcgggcgc tgtcgtcgca cgccctgcgc cagcgcgccg agcggcacgg ccgccgcctc
     2821 gtcgtcgtct ccctgagcca tttgcagacc cgtcgcggca tggccgccgc gatgtccggc
     2881 cgctacaccc tcgatggtgc gccgcgcgtc cacatcgcac tctgcggtac cggtccgggg
     2941 ctgcaggagg tgacgatgga agtcgtccgc cagggcttcg ggctcgagac agaacggccg
     3001 ctcgtttcga tcctgcggac cggcgcggcc gacttcaccg ccggggcgct cgagcggctg
     3061 caggcgagcg aggccgcggc catcgaagcc agcaccgcct tcgccgcgat caccggcggc
     3121 ctcgacaaat ccatctcctc gatcgtcctc gaccacccgc cgctgctcgc cgtccactgc
     3181 gtcggcgata cccccgccga ggccgaagcc ctggccctgc gctgggagga ggcgctgctg
     3241 cgcctgcgcc agccggtgcc gccgatcatc gcctacgccg ccgacgaccg gccgctcggc
     3301 accaccggca tgatccgcac cgccgccgcc cccgatctcg cggcggccag tgacgtggcg
     3361 cgcctgatgg accagcgcgc catggccgtg cacgcgatgt tccttgccgc gcagcgcgcc
     3421 gatcgcggcg agcacttcgg caccgcgccg gccgaggtcg agtgggcgca gctgcccgag
     3481 acctaccgcg acgacaaccg caacgtcgcc gaccagatgg actacaagct cgcccgcgtc
     3541 cgcctgctgt cgcggccggg accggccgtc gcgccactgg cggccggtga gatcgaggtc
     3601 ctcgccgggc tcgcccacgc ccgctggctg gcggccaagg cgctcaccgg ctggcgcttc
     3661 ggcccggttc gcgacaacca gcagctgctc catcccgaca tgatccctta cgccgagctg
     3721 tccgagggcg ccaagcagaa ggatcgcgac gaggtggcaa gcctcgcgcc catggcggcg
     3781 ctggccggcg aggcgctgct gcgcgagcgc cgcgtcgcgc tcaccgcccc gcttgccggc
     3841 tccgccctcc agcggttcgc cgacaatctg ctggcgagcc ccaaggctca ggtgccggtg
     3901 gccgtcctac cgctcgatga tgccggaatg ctcggcgtcg ccgccaccct tgcgggtcgc
     3961 ggcatcgcca tcgaggcggt gctcggcgag ggcagcttcg cgctgtggcg cagcgaggcc
     4021 gaggcgcccc gcctggcgtc gatcctgcgc gccgcctggc gcatccacgt ggcgcagggt
     4081 cggacggcgc gcgatgcctt ggctgaacgg gccggcgagg tcgggaacgg ggagggagcg
     4141 atcgatgcgc tggtctagtc tgctggccgt ggcggccatc ctgctcgtcg ccctgctgcc
     4201 ggccgccgcc gatgccgcct ccactgtcac caccaaccat gcccgcgaca gcatcgtgca
     4261 gcagctcggg cctacccgct cgcacgcgct gctgatcggc atcgaccagt tcgacgatgc
     4321 ggcggtctgg cacggcctgc ccggtgtcga caaggagatc aaggacgtcg gcgccgcgct
     4381 cgaggcgcag ggttttgaca tcgcccccga aagcctcgtc ggccac
//
LOCUS       DATAZA010000094         3070 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4069325, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000094 DATAZA010000000
VERSION     DATAZA010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3070
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4069325"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(33..182)
                     /locus_tag="VHZ56_02380"
     CDS             complement(33..182)
                     /locus_tag="VHZ56_02380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296844.1"
                     /translation="MSLVETNRDRLLELYVPMFSQTPRVPYSTIIAMVEKALGATGPL
                     AGTVS"
     gene            complement(416..1144)
                     /gene="istB"
                     /locus_tag="VHZ56_02385"
     CDS             complement(416..1144)
                     /gene="istB"
                     /locus_tag="VHZ56_02385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_043766072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HEX4296845.1"
                     /translation="MERTEVLELMATLKLYGMRAAYDEVMATGIKRRHEPPRIVGDLL
                     SAEIAEKQARSIKYQLTIAKLPLAKDIDNFDFIGTPVNEALVRDLATGAFVAEQRNAV
                     LIGGTGTGKSHLAIAIARACIRGGARGRFYTVVDLVNRLESEARGGRQGRLADYLTRL
                     DFVVLDELGYLPFAQTGGQLLFHLISRLYERTSVVVTTNLAFGEWPSVFGDAKMTTAL
                     LDRLTHHCEIVETGNESWRFKHRA"
     gene            complement(1150..2643)
                     /gene="istA"
                     /locus_tag="VHZ56_02390"
                     /pseudo
     CDS             complement(1150..2643)
                     /gene="istA"
                     /locus_tag="VHZ56_02390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006200010.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
BASE COUNT          518 a         1017 c          986 g          549 t
ORIGIN      
        1 tgactatttg attggtctcg actcgatcag gtctagctga cggtcccggc caacggcccg
       61 gttgccccga gggccttctc caccattgcg atgatggtcg agtatgggac gcgaggcgtc
      121 tgcgaaaaca tcggcacgta caattccagc aggcggtcgc gattggtttc aacgagactc
      181 attcgcttct cggcggtcag tgtgtcaatc ggcgtccaag tttgaccccg gatcggcgtc
      241 caatgttgac ccctctcggt gctggttagg gcttgtcccg gtagcgaaca ggagggcccc
      301 gcgcggagcg gagtgaccgc cacgggtctg acgcagcgca gcgcgggagg tacctgtttg
      361 cccacctggg caagccccag ggggtggggt ccggggcggg ggatttcgcc ggcgctcagg
      421 cgcggtgctt gaagcgccag ctttcgttgc cggtctcgac gatctcgcaa tgatgggtca
      481 gccggtcgag cagtgcggtc gtcatcttgg cgtcgccgaa gacactgggc cattcgccga
      541 aggccaggtt ggtggtgacg acgacagagg tacgttcgta aagtcggctg atcaggtgga
      601 acagcagctg gccgccggtc tgggcgaacg gcaggtagcc gagttcgtcg agcaccacga
      661 agtcgagccg ggtcagatag tcggcaagcc gtccctggcg gccgccacgg gcctcgctct
      721 ccagccggtt aacgaggtca acgacggtgt agaagcggcc gcgcgcaccg ccgcgaatgc
      781 aggcccgggc gatggcgata gcgagatggc ttttgcctgt gcctgtaccg ccgatgagca
      841 cggcgttgcg ctgctcggcg acgaacgcgc ctgtcgccag gtcgcggacg agcgcctcat
      901 tcaccggcgt gccgataaag tcgaagttgt cgatgtcttt ggccagcggc agcttggcga
      961 tggtgagctg gtacttgatc gagcgggcct gcttctcggc gatctcggcg ctgagcaggt
     1021 cgccgacgat gcgcggcggc tcgtgccggc gcttgatgcc ggtcgccatc acctcgtcgt
     1081 aggccgcccg catgccgtag agcttgagcg tggccattag ctcgagcacc tcggtgcgct
     1141 ccatcacgac gccctccgca gccggtcata gcgggcgcaa tcggcgatcg gcgcgtggtg
     1201 cagccgcaat gcttccgggg ccaggattgt cgccgtcggc cccgggtccc gccggcgggc
     1261 caggatgttg aggatgacgt cggcggaatg caccccctcg ccgagtgcct cggcgcaggc
     1321 cgcctcgacc gcggccaggc cgtcggtcaa caccgccgcg agaaccttga ccatctggcg
     1381 atcgccgtcg tccgagccct tcagcttgcg ccgaacccgc tccaggctgg ccggcagcgg
     1441 ccagtccttg aacggagctc cgttcctgag cgcgccgggc ttgcgagcaa gcaccggcac
     1501 gtaatgccag gggtcgtaaa tcgtctcgcc gcggccgaag cggcggcgat gctcgccgac
     1561 gatcgcgccg tcctggcgaa tgacgatgcg atcggcgtag gcctgaatct cgaccggccg
     1621 gccgacggcg cgcgagctga ccgagtacct gttgttgtcg aagcgaacga ggcaggtctt
     1681 ggagaccgag gcctgggtcg cgtggaaccc gtcgaaaggg ctgccgatcg gcaccagctg
     1741 cgcgcgctcg gcctcgaaca ccgaccagat cgtgcggtcg ataagctcgg gatgcttgtg
     1801 caccctggcg taggcgacgc agcggtcgag cagccaggcg ttcagctcct cgtagctcgt
     1861 cacccgcagc cgcggcgtga agaagcgctc gcgcaccacc ccgacctggt tctcgacctg
     1921 gcccttctcc cagcccgagg ccggcgtaca ggcaaccgga tcgaccaggt aatgcccaca
     1981 catccgcgcg aagcggcggt tatattggcg gtccttgccg atgaacacgg tctcgaccgc
     2041 cgtcttcatg ttgtcgtaga tgccgcgtgt gcaggtgccc ttgaagaagg cgaaggcccg
     2101 gttgtgcgcg tcgaacacca tctcctgggt ctcgcgcgga taggctcgca cgaatagcat
     2161 ccggctgtgg cagagccgga catgcgccac cttcacggtg accgtcgtgc cgttgatcag
     2221 cacgatctcg tgcgaccagt cgaactggta ggcctcgccc ggcgcaaagc tcagcggcac
     2281 ataggcctcc gccatcgcgg cgccccgttc gacgcgccac ttcttggcat atcgccgaac
     2341 cgcgtcgtag ctgccctcat agcccagccc gcgcagctcc tcgaacactc ggatcagcgt
     2401 cagacgctcg cgcgccgcct tcccctcgtt cgccagcagc atccgatcca gttcggtgtg
     2461 ccaggccccc agcttcggcc gcggctgcac caaccgctgg tactccaaag aggtcgcgcc
     2521 cgatctgagt atcttgcgca ccgtgttccg cgacaccttc agtgcgcgaa cgatctcctt
     2581 gatcgacctg cctttgacaa ggtgctcccg cctgatccga ccgatcgtct ccacaaccaa
     2641 catcccccgc cacccgctcg catccccaag cgggtcagcc tgcacgtcac agcgcaaagg
     2701 gggtcaatat tggacgccga tcacccctca acaggggtca atcttccacg ccggatcaca
     2761 ctccctggta atcgacacct ggaggatggc agagcgtccg gaaattctag tgcagcggac
     2821 caggatcaac catacctaga attctattct ctctgcgttt tgtgataaat cgagcggcgc
     2881 cacgcgctgc ttttgggagg gagacatggg ggaagtcgcc gcaaagctcg cgcagcccga
     2941 agctgctgcc accttcgcca gcgaatttat cgttcgctac ctcgatcccg cattcggcgc
     3001 gaaatcgaaa tcggagatcg acctcctcgt gtttgcgtgc ttggtcaaag ccggcgccgt
     3061 caatccgtcg
//
LOCUS       DATAZA010000095         4309 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1168039, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000095 DATAZA010000000
VERSION     DATAZA010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4309
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1168039"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            222..1424
                     /locus_tag="VHZ56_02395"
     CDS             222..1424
                     /locus_tag="VHZ56_02395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296846.1"
                     /translation="MPAPDPTAGFTDMQWYMYRRRNVAFFAAYTSRAFSADDLLRAAR
                     SLVELAPQLATGRPGGITDAMLRALIYRETVASLDGFPERWLDRGDAVLADPALPLFR
                     IRYAAAEAPSPDGRAGFLLVQVSHALVEGADSALLSRSQSAAHPPAVSSPRRTSPLVA
                     AAATGLGAVLAGLHLLAGNVLTIRHGPFGFATRSFPRPLFSELARAHGVRQRALFFAL
                     AMATLFDLGPDGKRRLSSTYSVIDDGGGRVRDPYMRMRMRFAAFDTVADFPALVRAVD
                     ARLAEAELRDNGFNDAMNAEGIRLHRQLSRLVPFAYTPRLFQFMPYDFVLGLIPPHRL
                     GGGLTAGLLEPVYAGAALEGANACVIVPGRRLVTFNFYIEQKLLPRIARLDAMLADPL
                     TFRSGTAR"
     gene            1530..2855
                     /locus_tag="VHZ56_02400"
     CDS             1530..2855
                     /locus_tag="VHZ56_02400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296847.1"
                     /translation="MKSFSSSSFASDHAEVLDLALAAVNKHPQALFTDFQWFLYEGRD
                     TVFFTAFSTATFDKDSIGNLVAEMVALAPQLTHGFFGARPGQPFPKHVLDAITSVETV
                     DEFDGYPDKWIGKSEDIFARNDLPLFRVMVAVRRGGPDAEGRASIIQVRSSHALMEGS
                     DSALLTRSQSAAHGVMSDKNNKVGLWPRIWGTVKAWSMTLIYVALGLTFAPPEKPFGF
                     KTLAISRHRLRRLANRLGVRQRSLYFALVTHALNGEGKDKYMDKKVIGAAYTMLDGAR
                     NNADDDFFRVRALEAHFKWSDDFVQFVRTIDDTVGRIENKDITKFQVMMNGIFKTLRS
                     LNRLATWLPGKRFWRFSAGLQIVLTLVPPHRTYGSMTNGLIEPIYCGAWHDGMNIATF
                     CPGRDYVTLNFAIETRLMHNVDKVMPLLERIEAMDLPAPTRRAVEVDAD"
     gene            2975..3751
                     /locus_tag="VHZ56_02405"
     CDS             2975..3751
                     /locus_tag="VHZ56_02405"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018429231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4296848.1"
                     /translation="MPVSTFARYPSLDGMPVVVSGGASGIGEAIVREFAAQGSRVGFV
                     DLMRDRGEALAAELTAAGHAVRFSATDITDVDAYQSAIRGFEAAHGPALALVNNAAND
                     RRMVWNEVTSADWDWSVAVNLKHSFFAAQAVVPGMIKAGKGSIVNFGSLSWMIMLGNL
                     PAYTASKAAMHGMSRSLARDFGPHGIRVNTLVPGWIMTEKQLTTIVGDAENRMIDAGQ
                     ALKGRVYPVDVARMALFLASDDSRMISAQDFVVDGGWAHN"
     gene            3828..>4309
                     /locus_tag="VHZ56_02410"
     CDS             3828..>4309
                     /locus_tag="VHZ56_02410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006724396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper domain-containing protein"
                     /protein_id="HEX4296849.1"
                     /translation="MKSSIVVAGLAVLALSACTTMNAYTGQQQLSSTAGGAMVGAGAG
                     AVVGAVAGAATGADPRVAALIGAGIGALSGAAVGHYMDQQEAELRAQLQSSGVSVTRV
                     GNQIILNMPSNITFDIDSATVQQTFNQTLTSIGLVMKKYDKTIVDVYGYTDNTGSTAH
                     "
BASE COUNT          679 a         1556 c         1302 g          772 t
ORIGIN      
        1 ataatccatg cccgtctctt ctgcccgccg atcagcgagc gaaccgtatt gatcaggtgt
       61 cagccttgac ataggtcaat tcgacgcgcg gagcgcccgg ctaagtcctt gcagttgaag
      121 ccatcctgag aagaactctg gcacgatcct aaataatccc gcccggcttg caagccgggg
      181 gaacggttgc ccagcgacct gtcggcccct acgctcggta aatgcccgct ccggatccga
      241 ccgccggttt caccgacatg cagtggtaca tgtaccgccg gcgcaatgtc gcgttctttg
      301 ccgcctacac gtcgcgcgcc ttctccgccg acgatctcct gcgcgccgcc cgaagcctcg
      361 tcgagctggc cccccagctg gccaccggac gtcccggcgg catcaccgac gccatgctgc
      421 gcgcgctcat atacagagag accgtcgcga gcctcgacgg ctttcccgag cgctggctcg
      481 atcgtggtga cgccgtcctc gccgatccgg cgctgcccct gttccgcatc cgctacgccg
      541 ccgccgaagc gccctcgccg gatggtcgcg ccggcttcct cctcgtgcag gtgtcgcacg
      601 ccctcgtcga gggcgccgat tccgcgctgc tcagccgctc gcaatccgcc gcccatccgc
      661 ctgccgtcag ctcgcctcgt cgaacctcgc cgctggtcgc cgccgccgcg accggtctcg
      721 gcgccgtcct cgccggactg cacctgctcg ccggcaatgt cctgaccatt cgtcatggtc
      781 cgttcggctt tgccacccgc agttttccac gcccgctgtt ctccgaactc gcccgcgcac
      841 acggcgtacg ccagcgagcg ctgttcttcg cccttgcgat ggcgaccctt ttcgatctcg
      901 gcccggacgg gaagcggcgc ctgagctcga cctactcggt catcgacgat ggcggcggcc
      961 gcgtccgcga tccctacatg cggatgcgca tgcgctttgc cgccttcgac accgtggccg
     1021 acttccccgc ccttgttcgc gccgtcgacg ctcgccttgc cgaggccgag ctgcgcgaca
     1081 acggcttcaa cgacgcgatg aacgccgagg gcatccgcct ccatcgccag ctcagccggc
     1141 tcgttccctt tgcctacacg ccgcggctgt tccagttcat gccctacgac ttcgtgctcg
     1201 gcctcattcc gccgcatcgg cttggcggcg gcctgactgc ggggctgctg gagccggtct
     1261 atgccggcgc cgcgctggag ggggccaacg cctgcgtgat cgttcccggc cgccggctgg
     1321 tgaccttcaa tttctacatc gagcagaagc tcttgccgcg catcgcccgg ctcgacgcca
     1381 tgctcgccga cccgctcacc ttccgttcag gaacggcacg ctaacccctg tcggaccggc
     1441 gttaacggca tccctgtccg ccggttgacc ggggtttgcc gtaccgaata tcaatgttaa
     1501 taacccgcta agagcattgg aggccctttg tgaagagctt ttcctcgtcc agtttcgcca
     1561 gcgaccacgc cgaggtgctc gacctagcgc tggccgccgt caacaagcat ccgcaggccc
     1621 tgttcacgga cttccagtgg ttcttgtacg aaggccgtga caccgtcttc ttcaccgcct
     1681 tctcgacggc gacgttcgac aaggattcga tcggcaatct ggtcgccgag atggtggcgc
     1741 tggcgccgca gctgacgcac ggctttttcg gtgcgcgccc cggccagccg tttcccaagc
     1801 acgtgctcga cgccatcacc agcgtcgaga ccgtcgacga gttcgacggc tatcccgaca
     1861 agtggatcgg caagtccgag gatatcttcg cccgcaacga cctgccgctg ttccgcgtca
     1921 tggtggcggt gcggcgcggc ggtcccgacg ccgaggggcg cgcctcgatc atccaggtgc
     1981 gctcgagcca cgctttgatg gagggctcgg attcagcgct gctgacccgg tcgcagtctg
     2041 ccgcccacgg cgtcatgtcg gacaagaaca acaaggtcgg gctctggccg cgcatctggg
     2101 gcacggtcaa ggcctggtcg atgacgctga tctacgtcgc gctcggcctg accttcgcgc
     2161 cgcccgagaa gcccttcggc ttcaagacgc tggccatcag ccgtcaccgc cttcgccgcc
     2221 tggccaaccg cctcggtgtc cgccagcgct cgctctattt tgcgctcgtc acccatgccc
     2281 tcaacggcga gggcaaggac aagtacatgg acaagaaggt gatcggtgcc gcctacacca
     2341 tgctcgatgg ggcgcggaac aatgccgacg acgacttctt ccgcgtccgc gcgctcgagg
     2401 cgcacttcaa gtggtccgac gacttcgtcc agttcgtccg caccatcgac gacaccgtcg
     2461 gccggatcga gaacaaggac atcaccaagt tccaggtgat gatgaacggc atcttcaaga
     2521 cgttgcgttc gctcaaccgg ctcgccacgt ggctgccggg gaagcgcttc tggcggttca
     2581 gcgccggcct gcagatcgtc ctgacgctgg tgccgccgca tcgcacctac ggatcgatga
     2641 ccaacggcct catcgagccg atctattgcg gcgcctggca cgacggcatg aacatcgcca
     2701 ccttctgtcc cggccgcgat tacgtgacgc tcaacttcgc tatcgaaacc cggctgatgc
     2761 acaacgtcga caaggtgatg ccgctgctcg agcgcatcga ggcgatggat ttgccggcac
     2821 cgacgcgccg ggcggtcgag gtcgacgccg actagcaccg cctgatcgtc attccgcacc
     2881 gaccctgccg gcttccggtg gggtctggtc ctgccgtctt gcccgccgtc atcggcggct
     2941 ctaagacacc ccctgcatgg caacggaggg catcatgccg gtcagcactt tcgcccgcta
     3001 tcccagtctc gatggcatgc ccgtggtcgt ctcgggcggc gcctccggca tcggcgaggc
     3061 gatcgtgcgc gagttcgccg cgcagggcag ccgggtcggc ttcgtcgatc tcatgcggga
     3121 ccgcggggaa gccctcgccg ccgagcttac cgccgccggc catgctgtcc gcttcagcgc
     3181 caccgacatc accgatgtcg atgcctacca gtcagccatc cgcggcttcg aggccgcgca
     3241 cggccccgct ttggccctcg tcaacaatgc cgccaacgac cggcgcatgg tctggaacga
     3301 ggtgacctcg gccgactggg actggtcggt cgcggtcaac ctcaagcatt cgttcttcgc
     3361 ggcgcaggcg gtggtccccg gcatgatcaa ggccggcaag ggatcgatcg tcaatttcgg
     3421 ctcgctgagc tggatgatca tgctcggaaa tctgccggcc tacaccgcga gcaaggccgc
     3481 catgcacggc atgtcgcgct cgctggcgcg cgatttcggc ccgcacggca tccgcgtcaa
     3541 caccctggtg ccgggctgga tcatgaccga aaagcagctc accaccatcg tcggcgatgc
     3601 cgaaaaccgc atgatcgatg ccggccaggc actcaagggc cgggtctatc ccgtcgatgt
     3661 tgcgcgcatg gcgctgttcc tcgccagcga cgacagccgc atgatctcgg cgcaggactt
     3721 cgtggtcgac ggcggctggg cccacaactg acagcgccgc ttgcccggat caccgtgctg
     3781 ccgcattctg gcgtgatgag gaacccgtcg ttccgcaggg ggatcacatg aagtcgtcga
     3841 tcgtggtggc cggcctcgcc gtgctggcct tgagcgcatg cacgaccatg aacgcctaca
     3901 ccggccagca gcagctttcg agcaccgccg gtggtgccat ggtcggggca ggggcgggcg
     3961 ccgtggtcgg cgccgtcgcc ggcgctgcca caggtgccga tccgcgggtc gccgcgctga
     4021 tcggtgccgg catcggcgcg ctgagcggcg ccgccgtcgg ccactacatg gaccagcagg
     4081 aggccgaact gcgcgcccag ctgcagtcga gcggcgtctc ggtgacccgt gtgggcaacc
     4141 agatcatcct caacatgccc tccaacatca ccttcgacat cgattccgcg acggtgcagc
     4201 agaccttcaa ccagacgctg acctcgatcg gcctggtgat gaagaaatac gacaagacca
     4261 tcgtcgacgt gtacggctac accgacaaca ccggctcgac ggcccacaa
//
LOCUS       DATAZA010000096         5386 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2908915, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000096 DATAZA010000000
VERSION     DATAZA010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5386
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2908915"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..436
                     /locus_tag="VHZ56_02415"
     CDS             <1..436
                     /locus_tag="VHZ56_02415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HEX4296850.1"
                     /translation="DRATAPSFGALLQQANVPAGGILVVGSADWNGDPTILAAPFLQG
                     AIYPAVDDTGYQAILPLYQQRFGGTPHPFVTLAYTAVVLANAATLSLATPRYDAALLT
                     SPAGFNGRDGVFRFNANGTSQYALVIKKIGTGGAQVVDGPKI"
     gene            complement(455..1615)
                     /gene="hemW"
                     /locus_tag="VHZ56_02420"
     CDS             complement(455..1615)
                     /gene="hemW"
                     /locus_tag="VHZ56_02420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HEX4296851.1"
                     /translation="MAEPRSNGLFGVYVHWPFCAAKCPYCDFNSHVHRGAFDEAAYVE
                     AYKAEIGYFARLTKGRTVQSIFFGGGTPSLMDPRSVAAILETIGQYWSIAPKAEITLE
                     ANPTSVEADRFRGYRAAGVNRVSLGVQSLRPGPLAELGRRHTVDEAVAAVRLAQSIFP
                     RTSFDLIYARPRQTLSDWEDELKEALWLAQGHVSLYQLTIEMGTRYYDLFNAGKLKMP
                     DEDLGADFYELTQELTRAAGLPAYEISNHARPGQESIHNLIYWRYGEYAGIGPGAHGR
                     LLLDGQRHATAMEKLPFEWQKRVLGRGHGMATDDILTWEEEGDELLVMGLRLREGIDP
                     ERFARLSGRRIAQRQIDELRRIGFVESLPNGNLRVTDKGWPVLDAVVADLAA"
     gene            complement(1608..2462)
                     /gene="pdxY"
                     /locus_tag="VHZ56_02425"
     CDS             complement(1608..2462)
                     /gene="pdxY"
                     /locus_tag="VHZ56_02425"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: protein motif:HMM:TIGR00687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008478 - pyridoxal kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009443 - pyridoxal 5'-phosphate salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase"
                     /protein_id="HEX4296852.1"
                     /translation="MTSAILSIQSEVVTGHVGNAAARLALQRLGHEAWTVPTVLLSSH
                     AGHPGFAGEPVAPALFGKLLDALAAQGRLAEAAGILSGYLGAPEQAPLVAAAVERAKA
                     YTGTRLYCLDPAFGDDGRIYARPGVMEAMRDTLLPLADITTPNAFELSTLSGIAVTDT
                     ASAVAAAESLGRPIVVVTSVPVEGGLGTLLVAEDTALLATTPKIVSPPRGAGDLIAAL
                     LFGHMVAGRAIGEALERAVLSTYHVLEKSSGQPEMALVAEQDALAAPPRLEGFRLETI
                     AVGSRSDG"
     gene            complement(2455..3108)
                     /locus_tag="VHZ56_02430"
     CDS             complement(2455..3108)
                     /locus_tag="VHZ56_02430"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009146 - purine nucleoside triphosphate
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP pyrophosphatase"
                     /protein_id="HEX4296853.1"
                     /translation="MANIGRLKRGEKLLIATHNKGKLAEFRELFTPLGLVLISAADLG
                     LPEPDETGTTFVENARLKAHAAAGAAGMVALADDSGLCVDALGGEPGVYTADWAATPN
                     GRDYQMAMRRVEDRLQAIGANSPGLRKGSFNATLCLAHPDGRDDLYEGKVTGTMVWPP
                     RGDKGFGFDPIFMPDGFDITFGEMPSSAKHSWAPGQVGLSHRARAFARFVEGALEHD"
     gene            complement(3101..3820)
                     /gene="rph"
                     /locus_tag="VHZ56_02435"
     CDS             complement(3101..3820)
                     /gene="rph"
                     /locus_tag="VHZ56_02435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004549 - tRNA-specific ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEX4296854.1"
                     /translation="MRPSGRQPDQMRPVTIERAVAQKAEGSCLISFGNTRVFVTASVE
                     TTLPSWRRGSGLGWVTAEYGMLPRSTGSRTRREAAAGKQSGRTQEIQRLIGRSLRAVV
                     DMQALGENQITLDCDVLEADGGTRTASITGAYIALYDAIGWLKARNLTKGEPLRDSVA
                     AISCGIYRGTPVLDLDYLEDVEAHTDANFVLTGTGKFVEIQGTAEQVPFSRAELDSLM
                     GLAETGISQLTELQRQALANG"
     gene            3950..5020
                     /gene="hrcA"
                     /locus_tag="VHZ56_02440"
     CDS             3950..5020
                     /gene="hrcA"
                     /locus_tag="VHZ56_02440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017482677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HEX4296855.1"
                     /translation="MAKLPDDFLRVLNARSQDIFKKIVERYLETGSPVGSRDLSRLLA
                     VGLSPASVRNVMADLEDLGLIAAPHTSAGRQPTQQGLRFFVDAMLEVGAVDERERTQI
                     ARQIEGQSGKLEDILTEASSLLSGLSHGAGVVIAAKADMVLKHIEFVRLDASQAMAIL
                     VGQDGAVENRVVALPPGLAANALTQASNYLATIALGKTLAETRATVAQQRAARVAELD
                     ELTQRLVDTGLATLSEGSAAQAPTVIVRGRSNLLNDAMESEELNRMRRLFDELERQDG
                     LMELLGDAEQAEGVRIFIGSENKLFSLSGSSVILSPYRDASEKVIGVLGVIGPTRLNY
                     ARIVPVVDYTAQAISAVLGRKK"
     gene            5135..>5386
                     /gene="grpE"
                     /locus_tag="VHZ56_02445"
     CDS             5135..>5386
                     /gene="grpE"
                     /locus_tag="VHZ56_02445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006724972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEX4296856.1"
                     /translation="MSDDTMAQDGFEPRPEIETPAPEADPVEALGKENAELKDRLLRL
                     AAEMENLRKRMEREIADTRSYAITKFARDMLTATDSLSRA"
BASE COUNT          836 a         1775 c         1960 g          815 t
ORIGIN      
        1 cgatcgcgcc acggcgccga gtttcggcgc gctgctgcag caggccaatg tgccggcggg
       61 cggcatcctg gtggtcggct cggccgactg gaacggcgat ccgacgatcc ttgcggcgcc
      121 gttcctgcag ggggcgatct atccggcggt ggacgacacc ggctaccagg ccatcctgcc
      181 gctctaccag cagcgcttcg gcggcacccc gcatccgttc gtgacgctgg cctacactgc
      241 cgtggtgctg gccaacgccg caacgctcag cctcgcgacg ccgcgctacg atgcggcgct
      301 gctcacctcg ccggccggct tcaacggtcg cgacggggtg ttccgcttca atgccaacgg
      361 caccagccaa tacgcgctgg tgatcaagaa gatcggcacc ggcggcgcgc aggtcgtcga
      421 cgggccgaag atctaggcaa acaccagcga tacttcaggc cgccagatcc gccaccacgg
      481 catcgagcac cggccagccc ttgtcggtca cccgcaggtt gccgttgggc aggctctcga
      541 cgaagccgat gcggcgcaat tcgtcgatct ggcgctgggc gatgcggcgg ccgctgaggc
      601 gggcgaagcg ctcggggtcg atgccctcgc gcagccggag gcccatgacg aggagttcgt
      661 cgccctcctc ctcccaggtc aggatatcgt cggtcgccat gccgtggccg cggccgagca
      721 cgcgcttctg ccactcgaac ggcagcttct ccatggcggt ggcgtggcgc tggccgtcga
      781 gcagcagccg gccatgggcg ccggggccga tgccggcata ttcgccgtag cgccagtaga
      841 tgaggttgtg gatcgattcc tggccgggcc gggcgtggtt ggagatctcg taggccggca
      901 gccccgcggc gcgggtcagc tcctgcgtca gctcgtagaa atcggcgccc agatcctcgt
      961 cgggcatctt gagcttgccg gcattgaaca ggtcgtaata gcgcgtcccc atctcgatgg
     1021 tgagctggta gagcgagaca tggccctgcg ccagccacag cgcttccttg agctcgtctt
     1081 cccagtcgct cagggtctgg cgcggccggg cgtagatgag gtcgaagctg gtgcgcggaa
     1141 agatcgattg cgcgaggcgc acggcggcga ccgcttcgtc cacggtatgg cggcggccga
     1201 gttcggcaag cgggccgggg cgcagcgact gcacgccgag cgagacgcgg ttgacgccgg
     1261 cggcacggta gccgcggaag cggtcggcct cgaccgaagt cgggttggct tcgagcgtga
     1321 tctcggcctt tggagcgatg ctccagtatt gtccgatggt ctcgaggatc gccgccaccg
     1381 agcgtgggtc catcagcgat ggcgtgccgc cgccgaagaa gatcgactgc accgtgcggc
     1441 ccttggtcag cctcgcgaaa tagccgatct cggccttgta ggcctcgaca taggcggcct
     1501 cgtcgaaggc gccgcggtgg acgtgcgaat tgaagtcgca atacgggcat ttggcggcgc
     1561 agaacggcca gtgcacatag acaccgaaca ggccgttgga gcgcggctca gccatcggag
     1621 cggctcccga cggcgatggt ctcgagccgg aagccctcga gccgcggcgg ggcggccagc
     1681 gcgtcctgct cggcgaccag cgccatttcc ggctggcccg agcttttttc gagcacgtgg
     1741 taggtcgaca gcacggcgcg ctccagcgct tcgccgatgg cgcggccggc gaccatgtgg
     1801 ccgaacagca gcgccgcgat caggtcgccg gcgccgcgcg gcgggctgac gatcttcggc
     1861 gtggtcgcga gcagcgcggt atcctcggcc accagcagcg tgccgaggcc gccctcgacc
     1921 ggcaccgagg tgacgacgac gatcgggcga ccaagcgatt ccgctgcggc gacggcgctg
     1981 gcggtgtcgg tgacggcgat gccggagagc gtcgacagct cgaacgcatt gggggtggtg
     2041 atgtcggcaa gcggcagcag ggtgtcgcgc atcgcctcca tgacgccggg acgggcatag
     2101 atgcggccgt cgtcgccgaa cgccgggtcg aggcagtaga gccgcgttcc ggtgtaggcc
     2161 ttggcgcgct cgacggcggc ggcgacgagc ggcgcctgct ccggcgcgcc gagatagccg
     2221 ctgaggatgc cggcggcttc ggccagccgg ccctgcgccg caagcgcgtc gagcagcttg
     2281 ccgaacagcg ccggagcgac cggctcgccg gcaaagccgg ggtgcccggc gtggctcgag
     2341 agcagcaccg tgggcaccgt ccaggcctcg tggccgagcc gttgcagggc caggcgcgcc
     2401 gcggcgttgc cgacgtggcc cgtcaccacc tcggactgga tcgagaggat ggcgctagtc
     2461 atgttcgagc gcaccctcga cgaatctggc gaaggcgcgg gcgcggtggc tgaggccgac
     2521 ctgcccgggg gcccagctgt gcttcgccga ggacggcatt tcgccgaagg tgatgtcgaa
     2581 gccgtcgggc atgaagattg ggtcgaagcc gaagcccttg tcgccgcgcg gcggccagac
     2641 catcgtgccg gtcaccttgc cctcatagag gtcgtcgcgg ccatcgggat gggcgaggca
     2701 cagcgtggcg ttgaacgagc ccttgcgcag gccgggcgaa ttggcgccga tcgcctgcag
     2761 ccggtcctcg acgcggcgca tcgccatctg gtagtcgcgg ccgttcggcg tcgccgccca
     2821 gtcggcggtg tagacgccgg gctcgccgcc gagggcatcg acgcaaaggc ccgaatcgtc
     2881 ggccagcgcc accatgccgg ccgcaccggc ggcggcgtgc gccttgagcc gggcgttttc
     2941 gacgaacgtc gttccggttt cgtccggctc gggcaggccg aggtcggcag ccgagatcag
     3001 caccagcccg agcggggtga acagctcgcg gaattcggcg agcttgccct tgttgtgggt
     3061 ggcgatcagc agcttttcgc cgcgcttcag gcggccgata ttagccattg gccagcgcct
     3121 gccgctgcag ctcggtgagc tgcgaaatgc cggtctcggc cagccccatc aggctgtcga
     3181 gctcggcgcg gctgaacggc acctgctcgg cggtgccctg gatctcgacg aatttgccgg
     3241 tgccggtgag cacgaaattg gcgtcggtgt gagcctcgac gtcctcgaga tagtctaggt
     3301 cgagcaccgg ggtgccgcga tagatgccgc aggagatggc ggcgacggag tcgcgcagcg
     3361 gctcgccctt ggtgaggttg cgggccttga gccagccgat ggcgtcgtag agcgcgatat
     3421 aggcgccggt gatcgaggcg gtgcgggtgc cgccatcggc ctcgagcacg tcgcaatcga
     3481 gcgtgatctg gttttcgcca agcgcctgca tgtcgaccac ggcgcgcagc gagcggccga
     3541 tcaggcgctg gatttcctgg gtgcggccgg actgcttgcc ggcggcggcc tcgcggcggg
     3601 tgcgcgagcc ggtcgagcgc ggcagcatgc cgtattcggc ggtgacccag cccagccccg
     3661 agccgcgccg ccacgagggc agcgtggttt cgaccgaggc ggtgacgaac accctggtat
     3721 tgccgaagct gatgagacag ctgccctcgg ccttctgggc gacggcgcgc tcgatggtga
     3781 cggggcgcat ctggtcgggc tggcgtccgg acgggcgcat cggctcactc gggttggggg
     3841 cgttaaccgc ctcttaaccc tagcgccggg cggccacaac ccggcgccgc ctttcatcga
     3901 ccgtcgtttt tgcctagatg gttagaagct ccaatttgat cgaaagccga tggcgaaact
     3961 ccccgacgat ttcctgcggg tgctgaacgc ccgcagccag gacatcttca agaagatcgt
     4021 cgagcgctat ctcgagaccg gcagcccggt gggctcgcgc gatctgagcc ggctgctggc
     4081 ggtcgggctg tcgccggcct cggtgcgcaa cgtcatggcc gacctcgagg acctcgggct
     4141 gatcgcggcg ccgcacacct cggccggccg gcagccgacg cagcaggggc tgcggttctt
     4201 cgtcgacgcc atgctggagg tcggcgccgt cgacgagcgc gagcgcacgc agatcgcgcg
     4261 gcagatcgaa gggcagtcgg gcaagctcga ggatatcctc accgaggcct cgtcgctgct
     4321 gagcgggctc agccacggcg ccggggtggt gatcgccgcc aaggccgaca tggtgctcaa
     4381 gcacatcgaa ttcgtgcggc tcgacgcgag ccaggcgatg gccattctcg tcgggcagga
     4441 cggcgcagtc gaaaaccgcg tcgtggcgct gccgccgggg ctggcggcga acgccctgac
     4501 gcaggcctcg aactatctgg ccaccatcgc gctcggcaag acgctggccg agacccgggc
     4561 gacggtggcg cagcagcggg cggcgcgggt ggccgagctc gacgaattga cgcagcggct
     4621 ggtcgacacc gggctcgcga cgctcagcga aggcagcgcg gcgcaggcgc cgacggtgat
     4681 cgtgcgcggc cgctcgaacc tcctcaacga cgccatggaa tcggaagagc tcaaccgcat
     4741 gcggcggctg ttcgacgagc tcgagcggca ggacgggctg atggagctcc tgggcgacgc
     4801 cgagcaggcc gagggcgtgc gcatcttcat cggcagcgag aacaagctgt tttcgctctc
     4861 cggctcctcg gtgatcctca gtccctatcg cgacgccagc gaaaaagtca tcggcgtgct
     4921 gggcgtcatc ggtccgaccc ggctcaacta cgcccgcatc gtgccggtgg tcgactacac
     4981 ggcgcaggcg atcagcgcgg tgctggggcg gaagaaatga gccccggcca ccgcccgcca
     5041 gcaactgccc gagggttgaa tcttgcggcc atctggccga tatgcggggc aaatggccgg
     5101 aacctccggc atcaccccac agtttgaggc aatgatgagc gacgacacca tggcgcagga
     5161 cgggttcgag ccgcgtccgg agatcgagac gccggcgccc gaggccgatc ccgtcgaggc
     5221 cctcggcaag gaaaatgccg agcttaagga ccggctgctg cggctggcgg ccgaaatgga
     5281 aaatctgcgc aagcggatgg agcgcgagat cgccgacacg cggtcctacg cgatcaccaa
     5341 attcgcccgc gacatgctga cggcgaccga ctcgctgagc cgggcg
//
LOCUS       DATAZA010000097         2525 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3141480, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000097 DATAZA010000000
VERSION     DATAZA010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2525
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3141480"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            169..1047
                     /locus_tag="VHZ56_02450"
     CDS             169..1047
                     /locus_tag="VHZ56_02450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020047386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX4296857.1"
                     /translation="MINTLIQGVLLGGYYALIASGLTFMFSVMRVINLAHGSLAVMAA
                     YALFALAKNFGISPFYGLLIVLPAMAVLGFLLQRLVLERSLRGGQLVPILATFGLAIV
                     IDNLLFEIFGANTTSLAPMIGSLSYDSIALPGNIYVGTLAVYTFIAAVVVLGALQLLL
                     SFTPLGRAIRATSEDPETAGLVGINARLVNAAATAIALVTVGIAGAALGMRGTFDGYA
                     GGAQLLFAFEAAVIGGAGSVWGTLLGGIVLAVAQSIGATISPLAFLIGGHAVFLVVLF
                     ARLLAPTLADRLRRRA"
     gene            1044..2063
                     /locus_tag="VHZ56_02455"
     CDS             1044..2063
                     /locus_tag="VHZ56_02455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX4296858.1"
                     /translation="MSSGLDFSIVRWTAASRAAIAAMAVIVVALAAGPLVLGPGAMDR
                     LTVLFVYVILAAMWNALAGYGGLVSVGQQVFLGLGAYFTVRYAAWGLDPFVSMVAAAV
                     TVGIIAVPLSYPMLRLRGGEFAIGMWVVSELAHLLVNLDGLVRGETGTSLISLNAYDA
                     PLRRDIIYWLALVAMVALLGALFVLLRSRVGSAIQAIRDNEDAAASVGVRVLGTKRLI
                     FVFAAFGAAMAGAVWLATALTFQPKAYFSVNWTAYMIFMVLVGGIGTFEGAILGAVLF
                     FAIETWFGSTGVWYLIGLGAAALVFALVLPRGIWGAIESRTGLRLLPVGYRLDIRSLL
                     KAEAR"
     gene            2065..>2525
                     /locus_tag="VHZ56_02460"
     CDS             2065..>2525
                     /locus_tag="VHZ56_02460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003550970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX4296859.1"
                     /translation="MLFGKCIVITGAASGIGARTAEVCTQLGAEVIGIDRQEPKAALA
                     GFIGGDLSSQGGIDAIVAKLPQRFDALCNIAGLSGAPGAAPTVAVNFYGLRALSEAVA
                     GKIREGGAIVSVASIAGYGWRANLNRAKSMLAAGGFPDVAAVLREHNVAEP"
BASE COUNT          306 a          803 c          946 g          470 t
ORIGIN      
        1 gacgatcctc ctcgtcgagc aggatctgag ccgggcgatg cgcgtcgcca gccgggtgat
       61 ctgcatgctc gaggggcgca ttgcgctcga ggggccgacc agcgggctcg agcgcgagcg
      121 ggtgacggcg gcgtatttcg gactgggcca cgaccggcag gtggtcgcat gatcaacacg
      181 ctgatccagg gcgtgctgct gggcggctac tacgcgttga tcgcctcggg cctcaccttc
      241 atgttctcgg tgatgcgggt catcaacctc gcgcatggaa gcctcgcggt gatggcggcc
      301 tatgcgctgt tcgcgctggc gaagaacttc ggcatctcgc cgttctacgg gttgctgatc
      361 gtgctgccgg cgatggcggt gctgggcttc ctgctgcagc ggctggtgct ggaacggagc
      421 ctgcgcggcg gccagctggt gccgatcctt gccaccttcg ggcttgccat cgtcatcgac
      481 aacctgctgt tcgagatctt cggcgccaac accacgtcgc tggcgccgat gatcggctcg
      541 ctgagctacg attcgatcgc gctgcccggc aacatctatg tcgggacgct ggctgtttac
      601 accttcatcg cggcggtggt ggtgctcggc gcgctgcaat tgctgctgag cttcactccg
      661 ctcggccggg cgatccgcgc cacctcggag gaccccgaga ccgccgggct ggtcggcatc
      721 aacgcgcgac tggtcaatgc ggcggcgacg gcgatcgcgc tggtgacggt gggcatcgcc
      781 ggcgcggcgc tcggcatgcg cgggacgttc gacggctacg ccggcggggc gcagctgctg
      841 ttcgccttcg aggcggcggt gatcggcggc gccggctcgg tgtggggaac gctgctcggc
      901 ggcatcgtct tggccgtggc gcagtcgatc ggcgcgacga tctcgccgct ggccttcctc
      961 atcggcggcc acgcggtgtt cctcgtcgtg ctgttcgcgc gactgctggc gccgacactg
     1021 gcggaccggc tgcggaggcg cgcatgagct ccggtctcga tttcagcatc gtgcgctgga
     1081 cggcggcgtc gcgcgcggcg atcgcggcaa tggcggtgat cgtcgtcgcg ctggcggccg
     1141 gaccgctggt gctcgggccg ggcgcgatgg accggctgac ggtgctgttc gtctacgtca
     1201 tccttgcggc gatgtggaac gcgctcgccg gctatggcgg gctggtttcc gtcggccagc
     1261 aggtgttcct cgggctcggc gcctatttca cggtgcgcta cgccgcctgg gggctcgatc
     1321 cgttcgtctc gatggtggcg gcggcggtga cggtgggcat catcgcggtg ccgctgagct
     1381 acccgatgct gcggctgcgg ggcggcgaat tcgccatcgg catgtgggtg gtttccgagc
     1441 tggcgcatct gctggtcaac ctcgacgggc tggtgcgcgg cgagaccggc acgtcgctga
     1501 tctcgctcaa tgcctatgat gcgccgctgc ggcgggacat catctactgg ctggcgctgg
     1561 tggcgatggt ggcgctgctc ggggcgctgt tcgtgctgct gcgcagccgg gtcggcagcg
     1621 ccatccaggc gatccgcgac aacgaggacg cggcggcctc ggtcggcgtg cgggtgctcg
     1681 gcaccaagcg gctgatcttc gtgttcgcgg cgttcggcgc ggcgatggca ggcgcggtgt
     1741 ggctggcgac cgccctcacc ttccagccga aggcgtattt ctcggtgaac tggaccgcct
     1801 acatgatctt catggtgctg gtcggcggca tcggcacgtt cgaaggcgcg atcctcggcg
     1861 cggtgctgtt ctttgccatc gagacgtggt tcggctcgac cggcgtctgg tacctgatcg
     1921 ggctcggcgc cgcggcgctg gtgtttgcgc tggtgctgcc caggggcatc tggggggcga
     1981 tcgagagccg cacggggttg cgcctgctgc cggtgggcta ccgcctcgac atccgctcgc
     2041 tgctgaaagc ggaggcccga tagaatgctg ttcggcaaat gcatcgtcat caccggcgcg
     2101 gcctccggga tcggagcccg caccgcggag gtgtgcacgc agctcggggc cgaggtcatc
     2161 ggcatcgacc ggcaggagcc gaaggcggcc cttgccggct tcattggggg cgacctgtcc
     2221 tcgcagggcg gcatcgatgc catcgtggcg aagctgccgc agcggttcga tgcactgtgc
     2281 aacatcgcgg gactctccgg cgcgccgggg gcggcgccga cggtcgccgt caatttctat
     2341 gggctgcggg ccctgagcga agcggtcgcc ggcaagatcc gcgaaggtgg cgcgatcgtc
     2401 agcgtggcct cgatcgcagg atatggctgg cgcgccaacc tcaaccgggc gaaatcgatg
     2461 ctggcggccg gcggcttccc ggatgtcgcc gcggtgctgc gcgagcacaa tgtcgccgaa
     2521 cccga
//
LOCUS       DATAZA010000098         4883 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1401032, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000098 DATAZA010000000
VERSION     DATAZA010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4883
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1401032"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            168..1352
                     /locus_tag="VHZ56_02465"
     CDS             168..1352
                     /locus_tag="VHZ56_02465"
                     /inference="COORDINATES: protein motif:HMM:NF005761.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding domain"
                     /protein_id="HEX4296860.1"
                     /translation="MARMLISGAGIAGCCLAWWLQKDGAEVTLVEQAPEPRRGGYVLD
                     FWGLGYKVAEKMGLLAGLRQHDLEVEQFRIVDRSGRRISGIDQGALQGLTGGRIMSLQ
                     RSAVAAALYEAVRDRVDIRFDDGVAGIEDGPQGVDVQFRAGGAARFDLVFGADGLHSA
                     VRAAAFGAEESFERFVGYYVAAFTTTGYPHRDPHAYVTYGEPGRQIWRITIENDATVF
                     LLVFAEADPNAVPMHDTARQKDVLARRYADCGWETKEVLGALETATDLYFDRVSQIVM
                     PRWTSGRIALLGDACACPSLLAGEGSSMAMAEAYTLAGELHAAPGDHLRAFAAYEQRL
                     RPYVERKQKAARGFAASFVPTSAIGLWLRNFSIDAVGRLGLTRMLFGAQLNDDLQLGD
                     YR"
     gene            complement(1453..2448)
                     /locus_tag="VHZ56_02470"
     CDS             complement(1453..2448)
                     /locus_tag="VHZ56_02470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017965922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX4296861.1"
                     /translation="MLKSVLLLAAVAGLALAGPAVAQDKKQLVIVVKGLDNPFFESMH
                     QGCEKWNSENPTSQYECFYTGPASASDEAGEAQVLSDILAKPTTAAVAISPSNAQLIA
                     QTLRTANPQIPIMTVDADLTKDDAALRKTYLGTDNYLMGQKIGEFIKSKKPNGGTICT
                     IEGNAAADNILQRAQGMRDALTGQKGATALAGQGGWTEVPGCPVFTDDDGAKGVQAMT
                     DILTANPKIDAFGIMGGWPLFAAPQPYRALVGPLKARMDSGDFVIGSADTIGDEVGIL
                     KDGLVGELVGQRPFEEGYKAPAVMLDLIAGKKVDDNVFTGLDVCTQSTVDTCIAK"
     gene            2679..3419
                     /locus_tag="VHZ56_02475"
     CDS             2679..3419
                     /locus_tag="VHZ56_02475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013530854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4296862.1"
                     /translation="MAVLELDHISKHFGAIQAVNDISLSLEAGEVVGLMGDNGAGKST
                     LVKMIAGNFLPTSGSMKMDDSEVVLHRPVEARRHGIEIVHQDLALCNNLTAAANVFLG
                     RELRRGFGPFSILDYTGMYRRAGELFAQLRSETRPRDLIRQMSGGQRQAVAIARTMLS
                     RARIVLMDEPTAAISVRQVAEVLTLIRNLRDQGLAVVLISHRMPDVFGVADRVVVLRR
                     GRKVADKRIAQSSPEEVTGLITGAIEQV"
     gene            3423..4430
                     /locus_tag="VHZ56_02480"
     CDS             3423..4430
                     /locus_tag="VHZ56_02480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018854787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4296863.1"
                     /translation="MAITLEQTIARRQHNWTSLLLASQAFWVFVAIIAACVFLSFATR
                     GFMTPANLFNITRNFTFTAIIALGMTFVIIIGGIDLSVGSVLCLCSMAIATTMHAGAS
                     LEVGILAALATGLAVGLFNGVLIAYFGFPSFVVTLGMLSAARSFAMIASNNMTIFQFG
                     PDQARLLYLGGGAVNLFGLQVSLPLVYTLVLAAIAGFVLRWTRFGRHVQAIGGNEHAA
                     TLTGVPVRPIKVAVFMISGFTAAIAGIVETGWLGAVTTNIGTGMELQVIAAAVIGGAS
                     LVGGAGTAIGALVGAALIEIIRNSLGLLGINPFWQGTVIGGAIILAVAFERVRQIRIK
                     D"
     gene            4653..>4883
                     /locus_tag="VHZ56_02485"
     CDS             4653..>4883
                     /locus_tag="VHZ56_02485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007538051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX4296864.1"
                     /translation="MSRNFLVIDPEEKPDVLRALASEVRISILKVLHVVGPLNLNDIA
                     ARLSQPQSTISSNMQVLVDAGLVRTETQKARKG"
BASE COUNT          777 a         1622 c         1609 g          875 t
ORIGIN      
        1 tacccctgcg cgctgaactc ctccgctgcc gtgcggaaga gtgcctcgcg gcggtccacc
       61 ggcagccgct tcagtctttc agtggccatg attcgacttg ccgtgcgcca tcgtctgtac
      121 cataaatgtg taccaccggt acagacaatg gtccagagga gaggaatatg gccaggatgc
      181 tcatttcggg agccggaata gccggctgct gcctcgcctg gtggctccag aaagacggtg
      241 cggaggtgac cttggtcgag caggcgccgg agccgcggcg gggcggctac gtcctcgact
      301 tctggggcct cggctacaaa gtggcggaga aaatgggctt gctggccggg cttcggcagc
      361 atgacctcga ggtcgagcaa ttccgcatcg tcgaccggtc cgggcgccgc atcagcggca
      421 tcgaccaggg cgcattgcag ggtctcaccg gcggacggat catgagcctg cagcggtcgg
      481 cggtggccgc ggcgctctac gaggcggtca gggatcgggt cgacatccgg ttcgacgacg
      541 gggttgccgg tatcgaagat ggaccgcagg gcgtcgatgt gcagttccgc gccggcgggg
      601 ccgcgcggtt cgacctcgtc ttcggtgccg acgggctgca ctcggcggtg cgggccgcag
      661 cgttcggcgc cgaggagagc ttcgagcgtt tcgtcggata ttacgtcgcc gccttcacca
      721 ccaccggcta cccgcatcgg gatccgcatg cgtacgtcac ctacggcgag ccaggccggc
      781 agatctggcg gatcaccatc gagaacgacg ccaccgtctt cctgctggtg ttcgccgagg
      841 ccgatccaaa tgccgttcca atgcacgaca cggcgcgaca gaaagacgtt ctcgcgcgcc
      901 gctatgccga ctgcggctgg gagacgaagg aggtgcttgg cgcgctcgag actgccaccg
      961 acctctattt cgaccgggtg agccagatcg tcatgccgcg ctggaccagt gggcggatcg
     1021 ccttgctggg agatgcgtgc gcctgtccca gcctgctggc cggcgaaggc tcctcgatgg
     1081 cgatggccga agcctacacg cttgccggcg agttgcacgc cgcacccggc gatcacctgc
     1141 gggccttcgc cgcctatgag caacgcctgc ggccctatgt ggagcgcaag cagaaggccg
     1201 cgcgcggctt tgccgccagt ttcgtgccga ccagcgcgat cgggctctgg ctgcgcaatt
     1261 tctcgatcga cgccgtgggc cgactcggcc tgacccggat gctgttcggg gcgcagctga
     1321 acgacgatct ccagctcggc gactatcgct aggtcgagcc cggctggatt ccgggccatc
     1381 ggcgtcaggg gaaaaagaag gggcgcttgt cgcgcccctt caagatccgc cggaagaata
     1441 tgagccggtg ttctacttgg cgatgcaggt gtcgacggtc gactgcgtgc acacgtcgag
     1501 gccggtaaag acgttgtcgt cgaccttctt gccggcgatc aggtccagca tgacggcggg
     1561 cgccttgtag ccttcctcga acggccgctg gccgacgagt tcacccacga ggccatcctt
     1621 gaggatgccc acttcgtcgc cgatcgtatc cgccgagccg atgacgaaat cgcccgaatc
     1681 catgcgggcc ttgagcggcc cgaccaacgc acggtagggc tgcggcgcgg cgaacagcgg
     1741 ccagccgccc atgatgccga aggcgtcgat cttgggattg gcggtgagga tatcggtcat
     1801 cgcctgcacg cccttggcgc cgtcgtcgtc ggtgaacacc gggcagccgg ggacttccgt
     1861 ccagccaccc tggccggcga gcgcggtggc gcccttctgg ccggtgagcg cgtcgcgcat
     1921 gccctgggcg cgctgcagga tattgtcggc cgcagcattg ccctcgatgg tgcagatcgt
     1981 gccgccattg ggcttcttgc tcttgatgaa ctcgccgatc ttctggccca tcaggtagtt
     2041 gtcggtgccg aggtaggtct tgcgcagcgc cgcgtcgtcc ttggtgaggt cggcgtcgac
     2101 ggtcatgatc ggaatctgcg gattggcggt ccgcagggtc tgcgcgatca gctgcgcgtt
     2161 ggagggcgag atcgccaccg ccgcggtggt cggcttggcg aggatgtccg acaggacctg
     2221 cgcttcgcca gcttcgtccg aagccgaggc cggaccggtg tagaagcact catactgcga
     2281 tgtcgggttc tccgaattcc acttctcgca gccctggtgc atcgactcga agaacgggtt
     2341 gtcgaggccc ttgacgacga tcaccagctg cttcttgtcc tgggcgactg ccggaccggc
     2401 cagtgccagc cccgcgaccg cggcgagcag caacacactt ttcaacatgg atagaccctc
     2461 ccctgtgagt ggaggttcgc agcgccttgt ggcgtctcgc gagaccctcc cgccgcggaa
     2521 ataagcaggc tgaggtacgc acgtcaatcc aaaaatcata cttttcaatt tggtggtggc
     2581 gttgacctga aacggcctcg ggacgaagct ctccgcatcc ggtgaaggca ccgcggcagc
     2641 aagccgcggc cggctggata tgggggagag acatcagggt ggcggtccta gaactcgatc
     2701 acatttcgaa gcatttcggc gccatccagg cggtcaacga catctcgctg tcgctcgagg
     2761 cgggcgaggt cgtgggcctg atgggcgaca acggcgccgg caagtcgacg ctggtcaaga
     2821 tgatcgccgg caacttcctg cccacctccg gcagcatgaa gatggacgac agcgaggtgg
     2881 tgctgcaccg gccggtcgag gcccgccggc atggcatcga gatcgtccac caggacctcg
     2941 cgctctgcaa caatctgacg gcggcggcca atgtgtttct cggccgcgaa ctgcgccggg
     3001 gcttcggccc gttcagcatc ctcgactaca ccggcatgta ccggcgtgcc ggcgagctgt
     3061 tcgcccagct gcgctcggag acccggccgc gcgacctgat ccgccagatg tcgggcggcc
     3121 agcgccaggc cgtggccatc gcccggacca tgctcagccg cgcccgtatc gtgctgatgg
     3181 acgagccgac ggccgccatc tcggtgcggc aggtcgccga ggtgctcacc ctcatcagga
     3241 acctccgcga ccagggactg gcggtcgtcc tcatcagcca ccgcatgccg gacgtgttcg
     3301 gggtggccga ccgcgtcgtc gtgctgcgcc gcggccgcaa ggttgccgac aaacgcatcg
     3361 cccagagttc gcccgaagag gtcaccggcc tcatcaccgg cgccatcgaa caggtatagc
     3421 ccgtggccat cacgctcgaa cagaccatcg cccgccgcca gcacaactgg acgtcgctgc
     3481 tgctcgccag ccaggccttc tgggtcttcg tcgccatcat cgcggcctgc gtgttcctga
     3541 gctttgcgac gcggggcttc atgaccccgg ccaacctctt caacatcacg cgcaacttca
     3601 ccttcacggc gatcatcgcg ctcggcatga ccttcgtcat catcatcggc ggcatcgacc
     3661 tgtcggtggg atcggtgctc tgcctctgct cgatggcgat cgccaccacc atgcatgccg
     3721 gcgccagcct ggaagtcggc atcctcgcgg cgctggcgac gggcctcgcg gtcggcctct
     3781 tcaacggcgt gctgatcgcc tatttcggct ttccatcctt cgtggtgacg ctcggcatgc
     3841 tgtcggccgc ccgcagcttt gcgatgatcg cctccaacaa tatgacgata ttccagttcg
     3901 gccccgacca ggcccggctg ctctacctgg ggggtggcgc ggtcaacctg ttcggcctgc
     3961 aggtgtcgct gccgctcgtc tatacgctgg tcctcgccgc catcgccggc ttcgtgctgc
     4021 gctggacgcg cttcggccgc cacgtgcagg cgatcggcgg caacgagcac gccgccacac
     4081 tgaccggcgt gccggtgcgg ccgatcaagg tcgcggtgtt catgatctcg ggcttcaccg
     4141 ccgccattgc cggcatcgtc gagaccggct ggctgggggc ggtgacgacc aatatcggca
     4201 ccggcatgga gctgcaggtc atcgccgccg cggtgatcgg cggcgccagc ctcgtgggcg
     4261 gcgccggcac cgccatcggc gcgctggtcg gtgcggcgct gatcgagatc atccgcaaca
     4321 gcctcgggct gctgggcatc aatccgttct ggcagggcac ggtgatcggc ggcgccatca
     4381 tcctcgccgt cgccttcgaa cgcgtccggc aaatccgtat caaggactga accggcggcc
     4441 cggaccgccg gccgtggact ctcgcgtttg acgcctatcg cccaaggctt ctcgcgacgc
     4501 gtgcagagcg ggcggcgcgc gtttgccgga ccaggggcgt cagtccgaag ctccgctcgt
     4561 ttcttcgcaa tccgaagatc cgggtaggcg cctcttgatc acgtccaacc ctctgataca
     4621 taccggccag cagcaaccgg ttggaaaatg ccttgagccg taattttctg gtcatcgacc
     4681 cggaggaaaa gcccgatgtg ctgcgggccc tcgcctccga ggttcgcatc agcatcctga
     4741 aggtgctgca cgtcgtcggg ccgcttaatt tgaacgacat cgctgcccgg ctgagccagc
     4801 cgcagtcgac catcagttcc aacatgcagg tgctggtcga cgccgggctg gttcgcaccg
     4861 agacgcagaa ggctcgcaag ggc
//
LOCUS       DATAZA010000099         5239 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_124503, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000099 DATAZA010000000
VERSION     DATAZA010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5239
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124503"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..599
                     /locus_tag="VHZ56_02490"
     CDS             <1..599
                     /locus_tag="VHZ56_02490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HEX4296865.1"
                     /translation="AETLRTLQLRGNDGRPIADRVMLLDDLTALLAGGTLHPDALLQL
                     DYKEDASVLDARTLASFAQSVGPVAGNLILSSGDAESVRLLTETAPGIRVGYDPCDDD
                     AMAELAATSDYATFVRGALAASPAAEMVYLAHPLVLAAADAGTDLIGAFHAGGRLVDV
                     YTIQRADVAARPLVERLLALRADQLTTDDPEGLAAMLA"
     gene            complement(596..1423)
                     /locus_tag="VHZ56_02495"
     CDS             complement(596..1423)
                     /locus_tag="VHZ56_02495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003521667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HEX4296866.1"
                     /translation="MPQSYDAILADMVDVARQAGALTLDHFRRFRDLEIGIKGPADFV
                     SDADRESEQLIRKFLFARYPDWSFTGEEFPPVDGADREYRWLVDPIDGTTNFLNGQHY
                     TISIALRRGNQTVCGALYNPAADEMFTAIRGEGAFLNGERLQVSQRTEVGLMAIGTGL
                     PTSNLFSFPGFYQRLEAIRDPVGAVRIVGSSANSCAYVACGRLTGYFEESGLVDWAVG
                     VLLVEEAGGVVTDWWGRGAEFYERTGCVIVANPATHAYLLEKLRDAPVKEARHAKSA"
     gene            1708..2976
                     /locus_tag="VHZ56_02500"
     CDS             1708..2976
                     /locus_tag="VHZ56_02500"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HEX4296867.1"
                     /translation="MRFPKFGRVVAAAAAMTFVGMGVALAADPMGVDDGTQLTLWTRA
                     ATQARVDQLVQAYNASHKNHVTATYVVTDDYTTKVGAAAAANGLPDLFSADVVFMPNW
                     TSAGLFTDITDRVTAMPGIDKVAQAGINVATWQGKKYGMPFIADLSVWMWNKKLFKQA
                     GLDPDKGPASLVEFAADARAVAKLGGDIHGTYWGGNCGGCEVFTWFPIAWADGSDILN
                     ADGTASTANSDEWKSIYKIFHDMAADGTALMPDTKNETGATWTALFPKGTIGVMPMPA
                     TQISALVGTGLADADIGVTPIAGLKGGQSTFIGGDDIGISRDSKKADAAWNFITWVQS
                     DDAQVNVVAKSGNVLTRTDLATNKYITDPRVQLFNTIGAKGKTPLAKNFGSSFNDPQG
                     PWVKLMQDVVFGDGSQLDADTQAINDSLAQ"
     gene            3043..3975
                     /locus_tag="VHZ56_02505"
     CDS             3043..3975
                     /locus_tag="VHZ56_02505"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX4296868.1"
                     /translation="MASLSTTSEPTQTGVAQRARFMLRRQVIGFAYTIPTIVLVAVLF
                     VTPLLLVVRMSLSNWPLLTGAGKWNFPKNFVSISGNQLFWPAVWFTIEYTVLVTILLL
                     GFGLGLALLVQAQTRWVGLLRTVFLLPVSLGLAAASLLAYGFFSPNIGPIEQALEAMG
                     AGHGAILFLGTPLNALLSTSFLVVWKYAGFYMLILLVGLQEIPDDLYEAASLDGATWW
                     QSFRYVTLPLLRPSLSLATILCVTGSLLAFDQFFILTKGAPNNSTVTVVQVIYREAFQ
                     RENLGTAAALSLMVLVVLVVINALQLRFLRGERD"
     gene            3978..4817
                     /locus_tag="VHZ56_02510"
     CDS             3978..4817
                     /locus_tag="VHZ56_02510"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX4296869.1"
                     /translation="MAAATQPSTNGFGRTSYYVLTGGLAIIFLFPLAWSVVASVSPQA
                     LTGQSQGYGFGNYAMLWSFTPGLPTLLLNNVTLAVLTVAITLAVSTLGGYAFARFKFW
                     GKDALFLLTLSILMVPGATLLIPLYVMLTGLGLANTLLGVALVVAVFQLPFATYMMRI
                     SFEAIPRDLEESALIDGCDTFAVLWRIMLPAVVPGLVTVGLFAFLAAWNEFFAPLIML
                     TDPTKQTLPVAVANLRQQTMGAIDYGATEAGVVVMAVPCVILFLLLQRYYVRGFMSGA
                     IKG"
     gene            4881..>5239
                     /locus_tag="VHZ56_02515"
     CDS             4881..>5239
                     /locus_tag="VHZ56_02515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000976 - transcription cis-regulatory
                     region binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX4296870.1"
                     /translation="MTDSTKASRTGRSGLTIHDVARAAEVSIGTASKALNGTGHLRQE
                     TREKVLAAAQSIGYRPNDLAQSLHRARSMTVGLITNDSFGRFSFPIVEALEETLADRG
                     IAVFMCNATDDPERERQ"
BASE COUNT          855 a         1721 c         1729 g          934 t
ORIGIN      
        1 ctgccgagac gctccgcacc ctgcagctgc gcggcaatga cggccgcccg atcgccgacc
       61 gcgtgatgct gctcgacgat ctcaccgcgc tgctggcggg cggaacgctg caccccgacg
      121 cgctgctgca actcgactac aaggaggacg catcggtgct cgacgcgcgc accctcgcca
      181 gtttcgcgca gagcgtcggg ccggtcgccg gcaacctgat cctgagttcc ggcgatgcgg
      241 aatccgtccg cctgctgacc gagacggcgc cggggattcg cgtcggctac gatccgtgcg
      301 atgacgatgc catggcagag ctcgccgcaa ccagcgacta cgcgacattt gtccgtggtg
      361 cgctggcggc gtcgccggcc gccgaaatgg tctatctcgc gcacccgctg gtgcttgcag
      421 cggccgatgc gggcaccgac ctcatcggcg ccttccatgc tggtggacgg ctggtggacg
      481 tctacaccat ccagcgcgcc gacgtcgcgg cgcgcccgct cgtcgagcgg ctgctggcgc
      541 tgcgcgccga ccagctcacg accgacgatc cggagggtct ggcggcgatg ctcgcctagg
      601 ccgacttggc gtggcgggct tccttgaccg gcgcgtcacg gagcttttcg agcaggtagg
      661 catgggtggc cgggttggcg acgatgacgc agccggtgcg ctcgtagaac tccgctccac
      721 ggccccacca gtcggtgacc acgccgcccg cctcctcgac cagcagcact ccaacggccc
      781 agtccacgag gccggattcc tcgaagtagc cggtgagccg gccgcaggcg acataggcgc
      841 aggagttggc cgagctgccg acgatccgca cggcgccaac ggggtcgcgg atggcttcga
      901 gccgctggta aaagccgggg aagctgaaca ggttgctggt cggcaggccg gtgccgatgg
      961 ccatcaagcc gacctcggtg cgctgactca cctgcaggcg ctcgccgttg aggaatgctc
     1021 cctcgccgcg gatcgcggtg aacatctcgt cggcggccgg attgtacagc gcgccgcaga
     1081 ccgtctggtt gccgcggcgc agcgcgatcg agatggtgta gtgctggccg ttgaggaaat
     1141 tggtcgtgcc gtcgatggga tcgaccagcc accggtactc gcggtcggcc ccgtcgaccg
     1201 gcggaaactc ctcgccggta aaactccagt ccggatagcg ggcgaagagg aatttgcgga
     1261 tcagctgctc ggattcgcgg tcggcatcgg agacgaagtc cgccggtccc ttgatgccga
     1321 tctcgaggtc gcggaagcgg cgaaaatggt cgagcgtcaa cgccccggcc tggcgagcga
     1381 cgtccaccat gtcggcgagg atggcatcgt aggattgcgg cataagattc tccggatgtt
     1441 ccgtagccta ccgcgacgtc ccacgatcgc acagacattg cgacgcgagt tgaggtcgcg
     1501 atgcggcgtg atgtgccctt tggatgaagc cggccgggtg cttgtcaaac agcggccgac
     1561 gtggcaatta gtgccaagaa aagcttttcc tagctaatgg tccgactcaa ggaccggctt
     1621 gaacgctgtg caggaaaagc ttttcttggc gaacggggag ggacccatgg cgggttcggc
     1681 gttcgcttcc atgttgggag gacgttgatg agatttccga aattcggtcg ggtcgtggcg
     1741 gctgctgccg cgatgacctt tgtcggcatg ggcgtcgcgc tcgctgccga tccaatgggc
     1801 gttgatgacg gcacccagct gacgctgtgg acgcgcgccg ccacgcaggc ccgcgtcgat
     1861 cagctggtcc aggcctacaa cgcctcgcac aagaaccatg tgaccgcgac ctatgtcgtc
     1921 actgacgact ataccaccaa ggtcggggcc gccgcggcgg cgaacggcct gccggacctg
     1981 ttctcggccg acgtggtgtt catgcccaac tggacgtctg ccgggctgtt cacagacatc
     2041 accgatcgcg tcacggcgat gccgggcatc gacaaggtcg cccaggccgg catcaacgtg
     2101 gcgacctggc agggcaagaa gtacggcatg ccgttcatcg ccgacctctc cgtctggatg
     2161 tggaacaaga agctgttcaa gcaggctggc ctcgaccccg acaagggccc ggcgtcgctc
     2221 gtggagttcg cggcggatgc ccgcgccgtg gccaagctcg gcggcgatat ccacggtacc
     2281 tactggggcg gcaactgcgg tggctgcgaa gtgttcacct ggttcccgat cgcgtgggcc
     2341 gacggctcgg acatcctgaa cgccgacggc accgcttcga ccgccaattc cgacgagtgg
     2401 aagtcgatct acaagatctt ccacgacatg gcggctgacg gcacggcgct gatgcccgat
     2461 accaagaacg agacgggcgc tacctggacc gcgctctttc ccaagggcac catcggtgtg
     2521 atgccgatgc cggcgacgca gatctcggcg ctggtcggaa ccggcctcgc cgacgcggac
     2581 atcggcgtga cgccgatcgc cggcctcaag ggcggccagt cgacgttcat cggtggcgac
     2641 gacatcggca tttcgcgcga cagcaagaag gccgacgcag cgtggaactt catcacgtgg
     2701 gtgcagagcg atgatgccca ggtcaacgtc gttgccaaga gcggcaacgt gctgacccgc
     2761 acggaccttg caaccaacaa gtacatcacc gatccgcgcg tgcagctgtt caacacgatc
     2821 ggcgcaaagg gcaagacccc gctcgccaag aacttcggct cgtccttcaa cgacccgcag
     2881 gggccgtggg tgaagctgat gcaggacgtg gtgttcggcg acggcagcca gctcgacgcc
     2941 gacacgcagg cgatcaacga ctcgctcgcc cagtaaagcg atataggttg ggcgcggctt
     3001 ccccttcggg agaccgcgcc cagcgaccca gcgagtctcg ccatggccag cctttcgacg
     3061 acatccgagc cgacgcagac cggcgttgcg cagcgagccc gcttcatgct gcggcgccag
     3121 gtgattggct ttgcttacac cattccgacg atcgttctgg tggccgtgct gttcgtgacc
     3181 ccactgctgc tcgtcgtgcg catgtcgctc agcaactggc cactgctgac gggcgcgggc
     3241 aaatggaatt ttcccaagaa cttcgtttcg atctcgggca accagctgtt ctggccggcg
     3301 gtgtggttca ccatcgaata caccgtgctg gtgaccatcc tgctgctcgg cttcggcctc
     3361 ggcctggcgc tgctcgtgca ggcgcagacc cgctgggtgg gcctgttgcg aacggtgttc
     3421 ctgctgccgg tgtcgctcgg cctcgcggct gcctcgcttc ttgcctacgg ctttttctcc
     3481 cctaatatcg ggccgatcga gcaggcgctc gaggcgatgg gcgcgggcca cggcgccatc
     3541 ctgtttctcg gcacgccact caatgccctg ctgtcgacaa gcttcctcgt ggtctggaaa
     3601 tacgcgggct tctacatgct gattctgctg gtcgggctgc aggagattcc cgacgatctc
     3661 tatgaggccg cctcgctcga cggcgccacc tggtggcaga gcttccgcta cgtcacgctg
     3721 ccattgctgc ggccgtccct gtcgctggcg acgatcctgt gcgtgaccgg ttcgctgctc
     3781 gccttcgacc agttcttcat cctcaccaag ggggcgccga acaactcgac cgtgacggtg
     3841 gtgcaggtga tctaccgcga ggcgttccag cgggagaacc ttgggacggc ggcggcgctc
     3901 tcgctcatgg tgctggtggt gctggtggtg atcaacgccc tgcaactgcg gtttctccgc
     3961 ggggaaaggg actgaccatg gccgccgcga cacagccctc cacgaacggg ttcggacgca
     4021 cgtcgtacta cgtgctcacc ggcggcctcg cgatcatctt cctgtttccc ctcgcctgga
     4081 gcgttgtcgc atcggtgagc ccgcaggcgc tcacggggca atcgcaaggc tatggcttcg
     4141 gcaactacgc gatgctgtgg agcttcacgc ccggcctgcc gacgctcctg ctcaacaacg
     4201 tgacgctcgc cgtgctgacg gtcgccatca cgctcgccgt ctcgacgctc ggcggctatg
     4261 cgttcgcgcg gttcaagttc tggggcaagg acgcgctgtt cctgctgacg ctgtcgatcc
     4321 tgatggttcc cggcgcgacg ctgctcatcc cgctctatgt gatgctgacc ggattgggac
     4381 tcgccaacac cctgctgggc gtcgccctcg tggtcgcggt cttccagctg ccgttcgcca
     4441 cctacatgat gcgcatttcg ttcgaggcga tcccccgcga tctcgaggaa tccgccctga
     4501 tcgacggctg cgacaccttc gcggtgctct ggcgcatcat gttgccggcc gtggtccccg
     4561 gtctcgttac agtcggactg ttcgcattcc tcgccgcgtg gaacgagttc ttcgcgccgc
     4621 tgatcatgct gaccgacccg accaagcaga ccctgccggt ggccgtcgcc aacctccggc
     4681 agcagacgat gggcgccatc gactatggcg cgaccgaggc cggcgtcgtg gtcatggcgg
     4741 tgccctgcgt catcctcttc ctgctgctgc agcgctacta tgtgcgcggc ttcatgtccg
     4801 gcgcgatcaa gggctgaggt cgcagcgatg gatagggtca cggcaggcac aggcgggaca
     4861 cggcgcgcgg gagaccgcag gtgaccgaca gcacgaaggc atctcgcacc gggcgcagcg
     4921 gcctgacgat ccacgacgtg gcgcgggccg cagaggtgtc gatcggcacc gcgagcaagg
     4981 ccctgaacgg caccggccat ctgcggcagg agacgcgcga gaaggtgctg gcggcggcac
     5041 aaagtatcgg ctatcggccc aatgatctgg cgcagagcct gcaccgcgcg cggtcgatga
     5101 ccgtggggct gatcaccaac gacagttttg gccggttcag tttcccgatc gtcgaggcac
     5161 tggaggagac gctcgcggat cgcggcatcg ccgttttcat gtgcaatgcg acggatgatc
     5221 ccgagcggga gcggcagca
//
LOCUS       DATAZA010000100         3294 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3373907, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000100 DATAZA010000000
VERSION     DATAZA010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3294
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3373907"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            257..1609
                     /gene="mgtE"
                     /locus_tag="VHZ56_02520"
     CDS             257..1609
                     /gene="mgtE"
                     /locus_tag="VHZ56_02520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010658501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEX4296871.1"
                     /translation="MTYQSETAAEIAELSRLNSADAVEILNRESPQEAARRIGELPFA
                     LAVRILERSELSEAPAIITAMPDTLAGRLLDAMADDRATDIVGALEPEVSARLIKLVG
                     AASRSSIETLLAYPAGTAGAMMTTEYVAVPATFTVGATLAYVRKVERTRETIYAIYVL
                     DPGNGHLLRVVTLRRLIMGDAEAPILSIASEAAPIVVGPLMPREDVARLIRRHDLLAL
                     PVVDEAQRMLGIVTVDDVIDAMIAEQTEDVHKFGGLEALDRPYMQISFLGMIRKRAGW
                     LCALFLSEMLTASAMQTFADELNRAVVLTLFIPLIMSSGGNSGSQATSLLIRSLALNE
                     IGLREWWRVALRELPTGLVLGAILGVIGVIRISAWQWLGLFNYGAYWPLIATTVGASL
                     VGIVTFGSLAGSMLPFALKALKFDPASASAPFVATLVDVTGLVIYFSIALVFLRGTLL
                     "
     gene            1681..2334
                     /locus_tag="VHZ56_02525"
     CDS             1681..2334
                     /locus_tag="VHZ56_02525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HEX4296872.1"
                     /translation="MTDFEHARKIMVDNQLRTSGITDRRLLAAMGEVPRELFVPAVRR
                     ELAYIDEAQPLNATRRMAPPAPFAKLVQLAAIEHTDRVLDLGCGTGYSTAVLARLGAQ
                     VVAVEEDAGLAAEARRRLAGLGVGNAQVVEGSFTTAAASAGPYDVIVIEGSMTEVPDA
                     VLAQLKPEGRLVVTIQPKGRPGVANLFARSGKGVAATAAFDARLPPLEHGVDDAFVF"
     gene            2533..>3294
                     /locus_tag="VHZ56_02530"
     CDS             2533..>3294
                     /locus_tag="VHZ56_02530"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX4296873.1"
                     /translation="MFCSLPALAHAETLREALTSAYTNNPDILSALLNVKATAENIAL
                     AKGEKLPTIGASASVSDSYTAGEDVSTIGSNLTGGVGLSYNQTLFDNFKSDADIEAAR
                     ALTEASRYALQNSEQNVLLAVVEAYMDVIRDQQLAQLRQENVKFYQAQVDSANDRLKI
                     GEGTKLDVSQAQARLAQGTALYQADIATLQADMATYDRYVGHNPKNLTSTFNVGTLMP
                     KTLDRAIAEATTDNPAILSAKAAIRASQANSDAANA"
BASE COUNT          542 a         1065 c         1162 g          525 t
ORIGIN      
        1 tgaaaatcgg cgacttcctg gcggcgggcg agagcgactt tgtcgcatgg ggcgggccgt
       61 cccgggcgtt gacggcgccg cgccggaagc tcatttcagc cgcaggcagc gggcgtgtcc
      121 cgcggctttt cccggagtta cgaaccccat gccaagcgac agtcccagtc gatcgtcgat
      181 gccgttcgcg ggcgtgagct gacctcctga tcggctcgcc ttcgccgaac ggcggatcgg
      241 cggaaagcga gccacaatga cctatcaatc cgagaccgcg gctgaaattg ccgagctcag
      301 ccggctgaat tcggccgacg ccgtcgaaat cctcaatcgc gagagcccgc aggaggcagc
      361 gcgccggatc ggcgagctgc cgtttgcgct cgccgtgcgc atcctcgagc gctccgagct
      421 cagcgaggcg ccggcgatca tcaccgccat gccggatacg ctcgccggcc ggctgctcga
      481 cgccatggcc gacgaccgcg ccaccgacat cgtcggcgcc ctcgagcccg aagtcagcgc
      541 gcggctgatc aagctggtgg gcgccgcgag ccgctcctcg atcgagaccc tgctcgccta
      601 tccggcaggg acggcgggcg ccatgatgac caccgaatac gtggcggtgc cggccacctt
      661 cacggtcggc gcaacgctgg cctatgtgcg caaggtcgag cggacgcggg agacgatcta
      721 cgccatctac gtgctcgatc cgggcaacgg ccacctgctg cgggtggtga cgctgcgccg
      781 gctgatcatg ggcgatgcgg aggcaccgat cctcagcatc gcgtcggagg cggcgccgat
      841 cgtcgtcggg ccgctgatgc cgcgcgagga cgtggcgcga ctgatccggc ggcacgattt
      901 gctggccctg ccggtggtcg acgaggcgca gcggatgctc ggcatcgtga cggtcgacga
      961 cgtgatcgac gcgatgatcg ccgagcagac cgaggacgtg cacaagttcg gcgggctcga
     1021 ggcgctcgac cggccgtaca tgcagatcag ctttctcggg atgatccgga agcgggccgg
     1081 gtggctgtgc gcgctgttcc tcagcgagat gctgacggcg agcgcgatgc agacctttgc
     1141 cgacgagctc aatcgcgcgg tggtgctgac gctgttcatt ccgctgatca tgagctcggg
     1201 cggcaattcg gggtcgcagg cgacctcgct gctcatccgg tcgctggcgc tcaacgaaat
     1261 cggactccgg gagtggtggc gggtggccct gcgggagctg ccgaccgggc tcgtgctcgg
     1321 cgccatcctc ggggtgatcg gggtgatccg catcagcgcg tggcaatggc tcgggctgtt
     1381 caactacgga gcgtactggc cgctgatcgc gacgaccgtg ggggcgtcgc tggtcggcat
     1441 cgtgacgttc ggctcgctgg ccggatccat gctgccattc gcgctcaagg cgctgaagtt
     1501 cgacccggcg agcgcctcgg cgccgttcgt ggcgacgctc gtcgacgtca ccggcctcgt
     1561 catctacttc agcatcgcgc tggtgttcct gcgcggcacg ctgctctaag ccgcaggtgc
     1621 ttgcccggct ggcggggcag ggctatgcgt caggaatcat tggttcgtgc agggcaggcg
     1681 atgacggatt tcgagcacgc gcgcaaaatc atggtggaca accagctgcg caccagcggc
     1741 atcaccgacc ggcgcctgct ggcggcgatg ggcgaggtgc cgcgcgagct gttcgtgccg
     1801 gcagtgcggc gcgagctcgc ctatatcgac gaggcgcagc cgctgaacgc aacgcgccgg
     1861 atggcgccgc cggcgccgtt cgccaagctg gtgcagctcg cggcgatcga acacaccgac
     1921 cgggtgctcg atctcggctg cggcaccggc tactcgacgg cggtgctcgc ccggctcggg
     1981 gcgcaggtgg tggcggtgga ggaagatgcg gggctcgcag cggaggctcg ccggaggctc
     2041 gccgggctcg gcgtgggcaa tgcgcaggtg gtcgagggga gcttcacgac ggcggccgcg
     2101 agcgcgggcc cgtacgatgt catcgtgatc gaagggtcga tgaccgaggt gccggatgcc
     2161 gtgctggcgc agctcaaacc ggaaggccgg ctggtggtca cgatccagcc caagggccgg
     2221 ccgggcgtcg cgaacctgtt tgcgagatcg ggcaagggcg tcgccgcgac cgcggcgttc
     2281 gacgcgcggc tgccgccgct cgagcacggc gtcgatgacg ctttcgtttt ctagcgagac
     2341 ctcgccgctt gctagaccac gcttagcatg tgttgcccgc gcaccactga aagtgtgaat
     2401 cgcacgttaa cttttgacac cccttgcccg gataagttgt gcgacccaac tgccgggcat
     2461 aggctcccta ggcgctggag gcggtagtag atgttgtttt ctcgtagtgt gcgtgcgggc
     2521 gcactagcac tcatgttttg ttcgttgccg gcattggcgc atgcggagac gctgcgcgag
     2581 gccctgacga gcgcctatac caacaatccc gacattcttt cggccctgct gaacgtcaag
     2641 gcgacggcgg aaaacatcgc gctcgccaag ggcgagaagc tgccgacgat cggcgcttcg
     2701 gcgagcgtgt cggacagcta cacggccggt gaggatgtct cgacgatcgg ctcgaacctg
     2761 accggcggcg tcgggctcag ctacaaccag acgctgttcg acaacttcaa gagcgacgcc
     2821 gacatcgagg cggcgcgggc gctgaccgag gccagccgct acgcgctgca gaactccgag
     2881 cagaacgtcc ttctggcggt ggtcgaagcc tatatggacg tgatccgcga ccagcagctg
     2941 gcacagctgc gccaggagaa cgtcaagttc taccaggcac aggtcgacag cgcgaacgac
     3001 cggctgaaga tcggcgaggg caccaagctc gacgtctcgc aggcgcaggc gcggctggcg
     3061 cagggcacgg cactgtacca ggcggatatc gcgacgctgc aggccgacat ggcgacctat
     3121 gatcgctatg tcgggcacaa cccgaagaac ctcacgagca cgttcaacgt cggcacgctg
     3181 atgcccaaga cgctggaccg ggcgatcgcc gaggcgacga cggacaaccc ggcgatcctt
     3241 tcggccaagg cggcgatccg cgcatcgcag gccaactccg acgccgccaa cgcc
//
LOCUS       DATAZA010000101         4323 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3025378, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000101 DATAZA010000000
VERSION     DATAZA010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4323
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3025378"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..431)
                     /locus_tag="VHZ56_02535"
     CDS             complement(<1..431)
                     /locus_tag="VHZ56_02535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020090970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX4296874.1"
                     /translation="MGSLDGQVSLITAAAQGIGRATVEAFARAGAHVVATDINADKLA
                     ELKALPNVETRVLNVLDPDAIAGAVAAIGRIDVLFNCAGVVHSGTVLEMSDKDLEFAL
                     SLNLWAQVRMVRAVLPQMLERRQGCIINMATVASSVKAVPNR"
     gene            complement(464..1588)
                     /locus_tag="VHZ56_02540"
     CDS             complement(464..1588)
                     /locus_tag="VHZ56_02540"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEX4296875.1"
                     /translation="MSIPGLTGVRGVAALWVVLFHIQGFATALHLPLLAGLPVVRNGW
                     EGVDLFFLLSGFVLMLGHEDDFHRLGKQALLRFAWLRVFRIYPLATVVLLLILALVLI
                     DRPFAARVAAGNIPPNLTLSSFIRTLLLATRWWTPVDGDWNQPVWSLSAEIMGYAVFP
                     LLAFAAGRVTSRAGLLVLTLVCLAYPTGIAWMHGQLVNSDLFWGAGTRMAGAFTGGIL
                     LCRLHRLTPETQRRRQGAIADAGLVGLLVAQALPAGAILGIFCFGAIVYGLASNEGWT
                     SRLCASRPAMLLGRISFPLYLVHVTVLSWLVFNVATYATPAWAAAIGLLLALLFCFCL
                     SWLLHVGIEQPAHNFARSRARRPEVARAGGEPIAVATPSR"
     gene            complement(1667..3382)
                     /locus_tag="VHZ56_02545"
     CDS             complement(1667..3382)
                     /locus_tag="VHZ56_02545"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX4296876.1"
                     /translation="MSTPSASRSDSRVFRFDQSGALLRKVMESAAVGMSLVGIDGRMI
                     YANRAHEAMLGLAADGALGQLAGDMIFEDDRQSTLLHFDRLLRGECDEMRLECRMRHA
                     DGGPIWVLATASLLHSDTTGRPLYAIVQTVSIDRQKRAEAALAESESRWNFALESAGQ
                     GVWDHDIRRDDMFYSRMWRRMRGIPDGEPIDPSQENWLARVHPEDVPSILARVKKQDL
                     GEDGFDTLQYRERHRDGHWVWIMSRGRPVEWDAGGHPLRTVGTDTDITHLKQIESDLA
                     GAKERFRVTLESIGDGVISTDAEARVMFMNPVAEAMTGWPAAEAIGRPLREVFVAKSE
                     STGEPATDHVGFCLSTGRSSQIEDDVVLAARDGTGRGLSGTAAPVRAADGSTIGAVLV
                     FKDVTDTQDAQRRLAHSARHDPLTGLPNRAAFGHALAEAQRQATAERRQHALCFIDLD
                     RFKPVNDTAGHAAGDALLQKVAQLIRMSCRSHDFAARFGGDEFVLLLPDCPLPSAREV
                     AHKIVDGIAALDFAWNGVPYRIGASAGVAPITAGSAHDPLAEADAACYSAKAAGRGRA
                     MISAT"
     gene            3576..3666
                     /locus_tag="VHZ56_02550"
     tRNA            3576..3666
                     /locus_tag="VHZ56_02550"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3610..3612,aa:Ser,seq:gct)
     gene            complement(3708..>4323)
                     /locus_tag="VHZ56_02555"
     CDS             complement(3708..>4323)
                     /locus_tag="VHZ56_02555"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013529297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="membrane dipeptidase"
                     /protein_id="HEX4296877.1"
                     /translation="FYDMGLRSLGPVWSRPTVFGHGVPFRYPGDPDIGPGLTPAGKDL
                     VRLCNELGIMIDLSHMNQAGFEDVARLSKAPLVATHSNVHALCASPRNLTDRQLDSIR
                     DTSGMVGLNFSVSFLRRDGMTSGESGLDDMLRHLDYLIEKLGEDHVGLGSDFDGCVVP
                     TPIKDVTGVPVLFRALADHGYDAALLAKLARGNWLACLDRSLKQ"
BASE COUNT          719 a         1424 c         1580 g          600 t
ORIGIN      
        1 cggttgggga cggccttcac cgacgacgcg acggtggcca tgttgatgat gcagccctgc
       61 cggcgctcga gcatctgcgg cagcacggcg cgcaccatgc gcacctgcgc ccaaaggttg
      121 aggctgagcg cgaactcgag gtccttgtcg ctcatctcca gcacggtgcc gctatggacg
      181 acgccggcac aattgaacag cacgtcgatg cggccgatcg cggccacggc ccctgcgatc
      241 gcatcggggt cgagcacgtt gaggacgcgc gtctcgacgt tgggcagcgc cttcagctcg
      301 gccagcttgt cggcattgat gtcagtagcg accacatgcg cgccggcgcg cgcgaaggcc
      361 tcgaccgtcg cccggccgat gccctgcgcc gcggccgtaa tgaggctgac ctgcccgtcg
      421 agactgccca taacccgttc cttcacccgt gacgcgcgga gtgctaccgg cttggcgtag
      481 cgacggcaat aggctcgccg cccgcccggg cgacctcggg ccgcctggcg cggctgcggg
      541 cgaaattgtg cgccggctgc tcgatgccga catgcagcag ccacgacagg cagaagcaga
      601 acagcagggc gagcagcagg ccgatagccg ctgcccaggc aggggtggcg taggtggcga
      661 cgttgaagac gagccagctc agcacggtga cgtggaccag gtagagcggg aacgagatgc
      721 gcccgagcag catcgcggga cggctggcgc acaggcgcga cgtccatccc tcgttcgagg
      781 caaggccata gacgatggcg ccgaagcaga agatgccgag gatggctccg gccggcaggg
      841 cctgcgcgac cagtagtcca acgaggccgg cgtcggcgat ggcgccctgc cgccggcgtt
      901 gcgtttcggg cgtcaggcga tgcagccggc aaagcaggat gccgccggtg aaggcgccgg
      961 ccatgcgggt gccggcgccc cagaacaggt cggaattgac cagttgccca tgcatccagg
     1021 cgatgccggt gggataggcg aggcatacga gcgtcagcac cagcaggccg gcccggctgg
     1081 tgacgcgacc ggccgcgaac gccagcagcg gaaacacggc atagcccatg atctcggcgc
     1141 tcagcgacca gaccggctgg ttccagtcgc cgtcgaccgg cgtccaccag cgggtggcga
     1201 gcagcagcgt gcggatgaag gaggacaggg tcaggttggg cggaatgttg cccgcggcga
     1261 cccgcgccgc gaacgggcgg tcgatgagca ccagcgccag gatcagcagc agcaccactg
     1321 tcgccagcgg gtaaatgcgg aagacccgca accaggcgaa gcgcaaaagc gcttgttttc
     1381 caagccggtg gaagtcgtct tcgtgaccga gcatgaggac gaagccggag agcaggaaga
     1441 acaggtcgac gccctcccag ccattcctga cgaccggcag gccggccagc agcggcaggt
     1501 gcaacgcagt ggcgaacccc tggatgtgga acaggaccac ccacagcgcc gccacgccgc
     1561 gaacgccggt caggccggga atggacacga ggcggcctcc gtggaccggt tgcgacgacg
     1621 ctgcccgcgc ggacgcgggg accagaggca aatggcgggg cggcggttag gttgccgaaa
     1681 tcatcgcccg gccgcgaccg gcggccttgg cggagtagca cgcggcatcc gcctcggcga
     1741 gcggatcgtg ggccgagccg gcggtgatcg gcgcgacgcc ggccgaggcg ccgatccggt
     1801 agggcacgcc gttccaggcg aaatcgaggg ctgcgatgcc gtcgacgatc ttgtgggcga
     1861 cctcgcgggc gctcggcagc ggacaatcgg gaagcagcag cacgaactcg tcgccgccga
     1921 agcgggccgc gaaatcgtgg ctgcggcagg acatgcggat gagctgcgcc accttctgca
     1981 gcagggcgtc gccggcggcg tgcccggcgg tgtcgttgac cggcttgaag cggtcgagat
     2041 cgatgaagca gagcgcgtgc tggcgccgct cggccgtcgc ctgccgctgc gcctccgcaa
     2101 gggcgtggcc gaaggcggcg cggttgggca gcccggtgag cgggtcgtgc cgcgccgaat
     2161 gggccagccg gcgctgcgca tcctgggtgt cggtgacgtc cttgaacacc agcacggccc
     2221 cgatcgtgct gccatcggca gcgcgcaccg gggcggcggt gccgctcagc ccgcggccgg
     2281 tgccgtcgcg ggcggcgagc acgacgtcgt cctcgatctg gctcgaccgg ccggtggaga
     2341 ggcagaagcc gacatggtcg gtcgccggct cgccggtcga ttccgacttg gcgacgaaca
     2401 cctcgcgcag cggccggccg atcgcctcgg ccgccggcca gccggtcatc gcctcggcga
     2461 ccgggttcat gaacatcacc cgcgcctcgg cgtcggtcga gatgacgccg tcgccgatgg
     2521 attcgagggt gacgcggaac cgctccttgg cgcccgcgag gtcgctttcg atctgcttga
     2581 gatgggtgat gtcggtgtcg gtgccgacgg tgcggagcgg gtggccgccg gcatcccact
     2641 cgaccgggcg gccgcggctc atgatccaga cccagtggcc gtcgcgatgg cgctcgcggt
     2701 actgcagcgt gtcgaacccg tcctcgccga gatcctgctt cttgacgcgc gccaggatgg
     2761 acgggacatc ctcaggatgc acccgggcga gccagttttc ctgcgatgga tcgatgggct
     2821 cgccatcagg gatgccgcgc atgcgtcgcc acatgcgcga atagaacatg tcgtcgcggc
     2881 ggatatcgtg gtcccagacc ccctgccccg ccgattcgag cgcgaagttc cagcggctct
     2941 cgctttcggc aagcgccgcc tcggcccgct tctggcggtc gatgctgacg gtctggacga
     3001 tggcgtagag cggccgcccg gtggtgtcgc tgtgcagcag cgaggcggtc gccagcaccc
     3061 agatcgggcc gccatcggcg tgtcgcatcc ggcattcgag ccgcatctca tcgcactcgc
     3121 cgcgcagcag tcggtcgaag tgcaacagcg tcgactggcg gtcgtcctcg aagatcatgt
     3181 cgccggcgag ttggccgagc gcaccgtcgg cggccagccc cagcatcgcc tcgtgggcgc
     3241 ggttggcgta gatcatgcgc ccgtcgatgc cgacgaggct catgcccacc gccgcgctct
     3301 ccatgacctt gcgcagcagc gcgccgctct ggtcgaagcg gaaaacccgg gagtcggatc
     3361 gcgaagcgga gggcgtggac attggcgcag gctggcgcgg caaccttaag gaccggctta
     3421 cttcgtcgca accacggccc ggccaccgga aaaaccgtgg cggatgatga agaatcggca
     3481 aagggccggc ccacaatccg cacccggcgg gaccactgcc cgcgacccgg cgcggccttg
     3541 ctttatggcg gcaaagcagg tttaaggcgc gcgtgggaga ggtggccgag tggtcgaagg
     3601 cacgcccctg ctaagggcgc agaccccaaa agggtctcgt gggttcgaat cccatcctct
     3661 ccgccagcca tcatgtcgcc gtccagccgc accgcggcca cgcccggcta ttgcttcagg
     3721 ctgcggtcga ggcaggcgag ccagttgccg cgggcgagct tggcgaggag ggcggcgtcg
     3781 tagccgtggt cggccagggc gcggaacagc accggcacgc cggtgacgtc cttgatcggg
     3841 gtgggaacga cgcagccgtc gaagtcggag ccgaggccga catggtcttc gccgagcttc
     3901 tcgatgagat agtcgagatg gcgcagcatg tcgtcgaggc cgctctcgcc ggaggtcatg
     3961 ccgtcgcggc gcaggaacga caccgagaaa ttgagcccga ccatgccgga ggtgtcgcgg
     4021 atgctgtcga gctgccggtc ggtgaggttg cggggcgagg cgcagagcgc gtggacgttg
     4081 gaatgggtcg ccaccagcgg cgccttcgac agccgcgcca cgtcctcgaa gcccgcctgg
     4141 ttcatatgcg acaggtcgat catgatgccg agctcgttgc agaggcggac gagatccttg
     4201 ccggcgggcg tcagtcccgg tccgatatcg ggatcgccgg gatagcggaa cggcacgccg
     4261 tgcccgaaga cggttggccg gctccacacc gggccgagcg agcgcaggcc catgtcgtag
     4321 aag
//
LOCUS       DATAZA010000102         2624 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3490182, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000102 DATAZA010000000
VERSION     DATAZA010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2624
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3490182"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..523
                     /locus_tag="VHZ56_02560"
     CDS             <1..523
                     /locus_tag="VHZ56_02560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HEX4296878.1"
                     /translation="ARRAVDAGAQMITVHGRTRQQFYKGAARWAPVRAVVEAVDVPVV
                     VNGDISSLAAAREALALSGAAAVMIGRGAQGQPWLVGQIAAGLAGVEAAEAPAGAELA
                     AIVVEHYEGVLSEYGTGVGVRAARKHLDWYLEASALPVDRGLRGRLVQSTVPAEVIAL
                     IGEIFGGGLRAAA"
     gene            520..1650
                     /locus_tag="VHZ56_02565"
     CDS             520..1650
                     /locus_tag="VHZ56_02565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007693476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4296879.1"
                     /translation="MNEMATPTLPLSVLQALPQPVIVVDEDRMVIFVNYAAESFFGAS
                     LSVLSRQRLDDLIAFGSPIVALAHSVAERRAPMTEYRVRVGSVRFGDGADDRIVDVFA
                     SPISDLDARVALLFQERTMADKIDRQLVSRGAARSVTGLASMLAHEIKNPLSGIRGAA
                     QLLEQSVTPEEMPLARLVREEVDRIVDLIDRVEVFGDDRPIEREATNIHVVLDRVKLL
                     AKSGIARNVSFSEDYDPSLPPVYGNRDQLIQVFLNLVKNAAEALERTPKAEIHISTAF
                     RPGIRIAVQGVAQRISLPLEIVIEDNGPGISPDLLPILFDPFVSTKANGSGLGLALVA
                     KIVGDHGGVIDSDSRPGRTRFRVLLPVAKGLKMPDETEVAAP"
     gene            1647..>2624
                     /locus_tag="VHZ56_02570"
     CDS             1647..>2624
                     /locus_tag="VHZ56_02570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003512914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEX4296880.1"
                     /translation="MSHTILLADDDAAIRMVLNQALTRAGYEVRPTGNLSTMWNWVSR
                     GEGDLLITDVAMPDGNAFDIMPKIKKLRADLPIVVMSAQNTFMTAIRANEVGAYEYLP
                     KPFDITEVLSVVARALADARKPAKGARKPDEPGEAMPLVGRSAAMQDIYRALARLMQT
                     DLTVMITGESGTGKELVARALHDFGRRRNGPFVAINMAAIPRDLIEAELFGHEKGAFT
                     GATARSSGRFEQAEGGTLFLDEIGDMPMDAQTRLLRVLQEGEYTMVGGRTPIKSNVRI
                     VAATHRDLSQMIRQGLFREDLYYRLNVVPIRLPPLRERTDDIGDLVSHFL"
BASE COUNT          418 a          831 c          975 g          400 t
ORIGIN      
        1 cgcgcggcgc gcggtcgatg ccggggcgca gatgatcacg gtgcacgggc ggacgcggca
       61 gcagttctac aagggcgcgg cgcgctgggc gccggtgcgc gccgtggtcg aggcggtgga
      121 cgtgccggtg gtggtcaatg gagacatcag cagcctcgcg gcggcgcggg aggcactggc
      181 gctgtccggc gcggcggcgg tgatgatcgg ccgcggggcg caggggcagc cgtggctggt
      241 cggacagatt gcagccggcc tcgctggcgt ggaggcggcc gaggcgccgg caggggcgga
      301 actcgcggcg atcgtcgtcg agcactacga gggggtgctt tcggaatatg gcaccggtgt
      361 cggggtgcgt gccgcgcgca agcatctcga ctggtatctg gaagcctcgg cgctgcccgt
      421 cgaccgcggc ctgcgcggcc ggctggtgca atcgaccgtg ccggccgaag tcatcgcgct
      481 catcggcgag attttcggcg gcgggctgag ggcggccgca tgaacgagat ggcgacgccg
      541 acgctgccgc tttcggtgct gcaggcgctg ccgcagccgg tgatcgtcgt cgacgaggac
      601 cgcatggtga tcttcgtcaa ctacgcggcg gaatcgttct tcggcgcctc gctcagcgtg
      661 ctgagccggc agcggctgga cgatctgatc gccttcgggt cgccgatcgt ggcgctggcc
      721 cattcggtgg ccgagcgccg ggcgccaatg acggagtatc gcgtgcgggt ggggtcggtg
      781 cgcttcggcg acggtgccga cgaccgcatc gtcgatgtgt tcgcgagccc gatttccgat
      841 ctcgatgccc gggtggcgct gctgttccag gagcgcacca tggccgacaa gatcgaccgg
      901 cagctggtga gccggggggc ggcacgctcg gtgacggggc tcgcctcgat gctggcgcac
      961 gagatcaaga acccgctgtc gggcatccgc ggcgcggcgc agctgctcga gcagtcggtg
     1021 acaccggagg aaatgccgct ggcccggctg gtgcgcgagg aagtcgaccg gatcgtcgac
     1081 ctgatcgacc gggtggaggt gttcggcgac gaccgcccga tcgagcgcga ggccaccaac
     1141 atccacgtcg tcctcgaccg ggtgaagctg ctggccaagt cggggatcgc gcgcaatgtc
     1201 agcttcagcg aggattacga cccgtcgctg ccgccggtct atggcaaccg cgaccagctg
     1261 atccaggtgt tcctcaacct ggtcaagaat gccgccgagg cgctcgagcg cacgccaaaa
     1321 gccgaaatcc acatctcgac ggccttccgc ccgggtatcc gcattgccgt gcagggggtg
     1381 gcgcagcgca tctcgctgcc gctcgagatc gtcatcgagg acaatgggcc gggcatctcg
     1441 ccggacctgt tgccgatcct gttcgacccg ttcgtcagca ccaaggcgaa cggatctggc
     1501 ctgggacttg cattggtagc gaagatcgtc ggtgaccacg ggggcgtcat cgacagcgac
     1561 agccggccgg gccgcactcg attccgggtg ctgctgcccg tggccaaagg attgaagatg
     1621 ccggacgaga ccgaggtcgc tgccccatga gccataccat cctgcttgcc gacgacgacg
     1681 cggccatccg catggtgctg aaccaggcgc tgacccgtgc cggctacgag gtgcggccga
     1741 cgggcaacct gtcgacgatg tggaactggg tcagccgcgg cgaaggcgac ctgctgatca
     1801 ccgacgtggc gatgccggac ggcaacgcct tcgacatcat gccgaagatc aagaagctgc
     1861 gcgccgacct gccgatcgtg gtgatgagcg cgcagaacac cttcatgacg gcgatccgcg
     1921 ccaacgaggt cggcgcctac gagtatctgc ccaagccgtt cgatatcacc gaagtcctgt
     1981 cggtggtggc gcgggcgctg gcagatgccc gcaagccggc aaaaggcgcg cgcaagccgg
     2041 acgagccggg cgaggcgatg ccgctggtcg gccgttcggc ggcgatgcag gacatctacc
     2101 gggcgctggc gcggctgatg cagaccgacc tcacggtgat gatcaccggc gagagcggca
     2161 ccggcaagga gctggtggcg cgggcgctgc acgatttcgg ccggcggcgg aacgggccgt
     2221 tcgtggcgat caacatggcg gccattccgc gcgacctgat cgaggcggag ctgttcgggc
     2281 acgagaaggg agccttcacc ggggccaccg cacggtcctc cgggcgcttc gagcaggccg
     2341 agggtggaac gctgttcctc gacgagatcg gcgacatgcc gatggatgcc cagacgcgcc
     2401 tgctgcgcgt gctgcaggaa ggcgagtaca cgatggttgg cggtcgcacg ccgatcaagt
     2461 cgaacgtgcg gatcgtggcg gcgacgcacc gcgacctcag ccagatgatc cggcagggcc
     2521 tgttccgcga ggatctctac taccggctga acgtggtgcc gatccggctg ccgccgctgc
     2581 gcgagcgcac cgacgacatc ggcgacctgg tgagccattt cctg
//
LOCUS       DATAZA010000103         9579 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2213280, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000103 DATAZA010000000
VERSION     DATAZA010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 9579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9579
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2213280"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..119)
                     /locus_tag="VHZ56_02575"
     CDS             complement(<1..119)
                     /locus_tag="VHZ56_02575"
                     /inference="COORDINATES: protein motif:HMM:NF012360.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-[acyl-carrier-protein]--UDP-N-
                     acetylglucosamine O-acyltransferase"
                     /protein_id="HEX4296881.1"
                     /translation="MSRNIHSTAIVEPGATLGDDVKIGPYCIVGAETALDDGV"
     gene            complement(121..555)
                     /gene="fabZ"
                     /locus_tag="VHZ56_02580"
     CDS             complement(121..555)
                     /gene="fabZ"
                     /locus_tag="VHZ56_02580"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEX4296882.1"
                     /translation="MDIDAILKCLPHRYPFLMIDRIVEIDGDNSAVGVKNVSVNEPIF
                     QGHFPGNPVFPGVLIIEGMAQTAGAIAIAADRTGGPHLVYMVTVDKCKFRKPARPGDV
                     IEYHIRKIRRRSAMGWYEARAMVGETLIAEAEVGAMVMAETP"
     gene            complement(596..1624)
                     /gene="lpxD"
                     /locus_tag="VHZ56_02585"
     CDS             complement(596..1624)
                     /gene="lpxD"
                     /locus_tag="VHZ56_02585"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: protein motif:HMM:NF002060.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HEX4296883.1"
                     /translation="MVDTRFHSSAGPAPLGALLASIGLGGVVPDDGGPLIAGAEELAL
                     AGPDQIALAAQSSYRDALRATFAGAVIVSRDLAGDVPAGTIAVIATAPHVAFADLLDR
                     LYPQDTRSTVLALMGPHDSLPRTEADVRLGPGVVLGPGVEIGRGTVIGPNSVIGAGVT
                     IGRNAVIGSNCSIECAYLGNGVVLHAGVRIGSEGFGWLDHGRTNRKIPQLGRVIVQDR
                     VEIGANSTVDRGALGDTVIGEGTKIDNLVQIGHNCRIGRNCLIAGTAALAGSTVVEDS
                     VMFGGGAAASGHLTIGRGSVLAARTLVTKDLAPGSQVAGYPAEDAHAWRRGVAMLRRL
                     SRRGESGR"
     gene            complement(1692..4016)
                     /gene="bamA"
                     /locus_tag="VHZ56_02590"
     CDS             complement(1692..4016)
                     /gene="bamA"
                     /locus_tag="VHZ56_02590"
                     /inference="COORDINATES: protein motif:HMM:TIGR03303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEX4296884.1"
                     /translation="MIDPTRLLRGAVLALALLFLAPLAGIGGPIVGVEAAQAATVTKI
                     TVIGNSRVDAATVDKYLALNVGDVVTAAKLSESVDSLQATGLFKTVSVTMQGSILVVK
                     VSENPIAAAALFEGNQRFSDANLIAMIDLMNRGTVDEAGLARDVASITQAYKDAGYSN
                     VGVTTRLEPVGDGRVRVVFVINEGVRNGIAAINFTGNNAIGSWTLKSIIKTHETSWLS
                     WLLKDDSYTQDQLDGDRALIQQYYANHGYPDAQVPSATAEFDAKKNGYFINFTVVEGN
                     HYKFGKIGVETSISGLDANQLTNTIRTHQGDGFSASDMQQTAQDMAVEATGLGYPFGT
                     VRPRVDRDPTANVFNVTYLIDEGQHVYIERINITGNVKTRDFVIRRELGFGEGDPFNQ
                     SLVAQAKTNINALGFFSNVDIQTEPGSAPDKVVLDIAVTEQSTGDYGVSLGFDSQAGI
                     LGTLSVSERNFLGRGQYISASIGASQAGQTYDFAFTEPYFMGLKMSAGIDVYRHVTDE
                     TSDDVYGTTTTGAQLNFGLPITPDLTGTVFTGFDQTTIADATSPFSPIFNDGDTFNKA
                     SVGYNLRYDTLDDEKHPTTGLVASFTQEYDGLDYNFIKTEAKARYFIPILPESGVIGS
                     IKLQAGIENSFGGSGVSPLQTFTYGNSIVRGFAPREMGPMLLSDGEAVGFTSYAAASA
                     EVDFPIPMLPETYGLSAGVWGDAGVIGGNGATGGNAIDPNSIDQPLKSSVGASILWDS
                     PFGPLRGDFALPLTYSTSEKAHLQYFSLTLQNLL"
     gene            complement(4279..5367)
                     /gene="rseP"
                     /locus_tag="VHZ56_02595"
     CDS             complement(4279..5367)
                     /gene="rseP"
                     /locus_tag="VHZ56_02595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018185430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEX4296885.1"
                     /translation="MVLTVIVFVHEMGHYLVARWNGVAIQTFSLGFGPEIIGFNDRRG
                     TRWRLSMIPLGGYVRFVGDMNASSMPDPEAVAALPEEEQRNLFINKNVWQRIAVVVAG
                     PLANVAFTFVVLYVLLLSYGQYTIPPVISDVTVGGIAATAGLEAGDKVMSVDGFSVRG
                     FEDFQRLISTAPGRQVTIVLERDGADRTIRLVPDAVEQTDRFGNVQRIGRIGVSRDVA
                     ASDVTLYTPGPIEAVGMTVDQIHFIVDRTVAFIGDFFVGRGDPEQLGGPVKVAKVSGE
                     VATLGIVALINLAALLSLNIGLFNLLPVPVLDGGHLLYYLVEAIRGRPLSQRAQEFGF
                     RVGFAIVGALMIFTLLNDTLLDALRHVS"
     gene            complement(5504..6361)
                     /locus_tag="VHZ56_02600"
     CDS             complement(5504..6361)
                     /locus_tag="VHZ56_02600"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: protein motif:HMM:NF013327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEX4296886.1"
                     /translation="MTSSAPSGSPPPRQAPSWTDLGPRVLSAAVIVAVAATGLYFGGY
                     AFAVLAAVLFGLLYREWEQMITLAPLGPFGFALIGLLAVAAILYPLLGVLGIIALIAL
                     AALLATFGDRAVLGWRVGGLVFFGAVLIAAMTMRGAGPAGIAAGWYLGIVIALNDSGA
                     YFAGRLLGGPKLVPAISPAKTWSGAIGGWITGIVAGTIFWLIFVHSPLWIGVLLAALL
                     GLVGQAGDITESAVKRVFRIKDSGDIIPGHGGFMDRLDSVSFGVLLLFVVGALHGGIG
                     NVAGGFLYW"
     gene            complement(6358..7119)
                     /locus_tag="VHZ56_02605"
     CDS             complement(6358..7119)
                     /locus_tag="VHZ56_02605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009465991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HEX4296887.1"
                     /translation="MSSEPAKQPQAAAEPGLRIPAHVGVIMDGNGRWAKARGKPRTEG
                     HVAGVRALRGLVESCINLGIEYLTVFSFSSENWTRPKDEISFIFGLLRRFVASDLEKL
                     HRNNVRVRIIGARQGLDDSLRRLIAEVEATTAMNTGLKLQVAFNYGGKAEIAEAVRRI
                     ASLVAAGRLRAEDITEDTIGRALYTSGLPDPDLIIRTSGEQRFSNFLLWQGAYSELVF
                     VEENWPDFDDAAFRRVLEDYSGRDRRYGGVEARQR"
     gene            complement(7156..7722)
                     /gene="frr"
                     /locus_tag="VHZ56_02610"
     CDS             complement(7156..7722)
                     /gene="frr"
                     /locus_tag="VHZ56_02610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002964286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEX4296888.1"
                     /translation="MAQAPAFSLDEMKQRMQKSIISLREELTGLRTGRASASLLEPVM
                     VEAYGTKMPLNQIATVTVPEARMLQVSVWDRSMAPAVDKAIRNSGLGLNPSTEGATIR
                     VPLPELNEERRRELTKVAHNYAEQARVAIRHIRRDGMELLKKLEKDGVMSQDDSRAKS
                     DLVQKATDEAIGEVDTVLAAKEREIMQV"
     gene            complement(7734..8477)
                     /gene="pyrH"
                     /locus_tag="VHZ56_02615"
     CDS             complement(7734..8477)
                     /gene="pyrH"
                     /locus_tag="VHZ56_02615"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004683875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEX4296889.1"
                     /translation="MTKPAYKRILLKVSGEVLAGDQSFGIETAYLVATAKQIVDAAQA
                     GVQIAIVPGGGNIFRGMSVAAGGADRVTADMMGTLGTVINALALSSEISRQGVRSKVF
                     SATTMPSVADTYTARAARAALDDGLVVVLGGGTGNPFFTTDTAAALRAIELECDVLLK
                     GTKVDGVYTEDPKKNPKATRYETVSYDEVIRRNLKVMDTAAFALARDNGLPILVYALG
                     EKDGLMGVLSGKTRSTLVGDPKPAADPKK"
     gene            complement(8649..>9579)
                     /gene="tsf"
                     /locus_tag="VHZ56_02620"
     CDS             complement(8649..>9579)
                     /gene="tsf"
                     /locus_tag="VHZ56_02620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007628662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HEX4296890.1"
                     /translation="KELRESTGVGMMDCKKALEETGGDMEAAVDWLRTRGLAKAAKKA
                     GRIAAEGLVGVSTEGTKAAIVEVNSETDFVARNDQFQGIVGSVAKLALEAKGSIEKLA
                     EMPFPGSGRSVAAELTDAIAKIGENMNLRRSAVVEVKDGVIGSYVHNTVKPGMGKLGV
                     IVGVESTGDKAVLTGLGKQLAMHIANTNPLSVSPDDIDPAVVAKEREIYTEQAKETGK
                     PAEVIAKMVEGRVRKFFEESTLLAQTFVIDGESKVRDIVARAEKEAGAPIKVTKFVRY
                     SLGEGIEKQETDFAAEVAATSGVPQQPTTPPHA"
BASE COUNT         1576 a         3260 c         3101 g         1642 t
ORIGIN      
        1 tcgacgccgt cgtcgagcgc cgtttccgcg ccgacgatgc aatagggccc gatcttgacg
       61 tcgtcgccca gcgtcgcgcc gggctcgacg atggcggtcg aatggatgtt gcgcgacata
      121 tcagggggtc tcggccatca ccatggcgcc gacctcggcc tcggcgatga gcgtctcgcc
      181 gaccatcgcc cgcgcctcgt accagcccat ggcactgcgc cggcggatct tcctgatgtg
      241 gtactcgatg acgtcccccg gccgtgccgg cttgcggaat ttgcacttgt cgacggtgac
      301 catgtagacg aggtgcggcc cgcccgtccg gtcggcggcg atcgcgatgg cgcccgccgt
      361 ctgcgccatg ccctcgatga tcagcacgcc cggaaacacc gggttgcccg ggaaatggcc
      421 ctggaagatc ggctcgttga cgctgacgtt cttgacgccg acggccgagt tgtcgccgtc
      481 gatttcgacg atccggtcga tcatcaggaa cggatagcgg tgcggcaggc acttgaggat
      541 ggcatcgatg tccatcgact cgagtgtccc cgaccgcgtc gctccggcct cgtctctaac
      601 gtccactttc gccccgtctg ctcagtcgtc tcaacatcgc caccccgcgc cgccaggcat
      661 gcgcatcttc ggccggataa ccggcgacct gcgaacccgg cgccaggtcc ttggtgacca
      721 gcgtgcgggc agctaagacg ctcccgcgcc cgatggtcaa gtgcccgctc gccgccgcgc
      781 cgccgccgaa catcacgctg tcctcgacga cggtcgagcc ggccagcgcc gcggtcccgg
      841 cgatcaggca gttgcggccg atccggcaat tgtggccaat ctgcaccaga ttatcgatct
      901 tggtgccctc cccgatcacc gtatcgccta gcgctccgcg gtcgacggtc gaattggcgc
      961 cgatttccac ccggtcctgt acgatgacgc ggccaagctg cgggatcttg cggttggtac
     1021 ggccgtgatc gagccagcca aagccctccg agccgatgcg cacccccgcg tgcagcacga
     1081 cgccattgcc gagataggcg cattcgatgc tgcaattgga gccgatcacc gcgttccggc
     1141 cgatggtgac gccagcgccg atcaccgaat ttggcccgat caccgtgccg cggccgatct
     1201 cgacgccggg accgaggacc acgccggggc cgagccggac atcggcctcg gtccgcggca
     1261 ggctgtcgtg cggccccatc agcgccagca cggtgctgcg ggtatcttgc gggtagagcc
     1321 gatccagcag atcggcgaac gcgacgtgcg gggccgtggc gatcaccgcg atggtgccgg
     1381 ccggcacgtc gccggcgaga tcgcgcgaaa cgatcacggc gccggcaaac gtcgcccgca
     1441 gggcgtcgcg atagctcgac tgcgccgcca gcgcgatctg gtcgggtccg gcgagcgcca
     1501 gttcctcggc gcccgcaatc agcggcccgc cgtcatccgg aaccacgccg ccgaggccaa
     1561 tcgaagccag cagggcgcca agcggtgccg ggccggcaga actgtggaat cgcgtatcga
     1621 ccatggcggg ctaacagaaa gggccgcggt gcaaggcccc gcggcccccg aactgtttca
     1681 tgctccccgg atcagagcaa gttctgcagg gtcagcgaga agtactgcag atgcgccttc
     1741 tcgctcgtcg agtaggtgag cggcagcgcg aagtcgccac gcagcggacc gaacggcgag
     1801 tcccagagga tcgacgcacc caccgagctc ttgagcggct ggtcgatcga attgggatcg
     1861 atcgcattgc cccccgtcgc accattgccg ccgatgacac ctgcatcgcc ccacacgccg
     1921 gcgctgagcc catatgtctc gggcagcatc gggatcggga agtccacctc ggcggacgct
     1981 gccgcgtagg acgtgaagcc cacagcctcg ccgtcgctca gcaacatcgg acccatttca
     2041 cgcggcgcaa agccccgcac gatgctgttg ccataggtga aggtctgaag tgggctgacc
     2101 ccactcccgc caaaggagtt ttcaataccg gcttgcagct tgatgctgcc gatcacgccg
     2161 gattccggca ggatcggaat gaagtaccgc gccttggctt cggtcttgat gaagttgtag
     2221 tcgaggccgt catattcctg ggtgaacgac gccaccagac ccgtggtcgg atgcttctcg
     2281 tcgtccagcg tgtcgtagcg cagattgtac cccaccgaag ccttgttgaa cgtgtcgccg
     2341 tcgttgaaga tcggcgagaa aggcgaggtg gcgtcggcaa tggtggtctg atcgaagcca
     2401 gtgaacaccg tgccggtcag gtctggggtg atcggcagcc cgaagttcag ctgcgcgccg
     2461 gtcgtggtcg tgccgtacac atcgtccgac gtctcgtcgg tcacgtgccg gtagacgtcg
     2521 atgcccgccg acatcttgag tcccatgaag tacggctcgg tgaaggcgaa atcgtaggtc
     2581 tgcccggcct ggctggcgcc gatcgaggcg ctgatgtact ggccgcggcc aaggaagttg
     2641 cgctcgctca ccgacagggt gccgaggatg cccgcctggc tgtcgaagcc gaggctcacg
     2701 ccatagtcac ccgtcgactg ctcggtcacc gcgatgtcca gcaccacctt gtcgggcgcg
     2761 ctgcccggct cggtctggat gtcgacgttc gagaagaacc cgagagcgtt gatgttggtc
     2821 ttggcctgcg ccaccagcga ctggttgaag gggtcgcctt cgccgaaacc cagctcgcgc
     2881 cggatgacga agtcgcgggt cttcacgttg ccggtgatgt tgatgcgctc gatgtagacg
     2941 tgctgcccct cgtcgatgag gtaggtcacg ttgaacacgt tggcggtcgg gtcgcggtcg
     3001 acgcgcggcc gaacggtgcc gaacgggtag ccgaggccgg tggcctcgac ggccatgtcc
     3061 tgcgccgtct gctgcatgtc cgaggccgag aacccgtcgc cctggtgggt gcggatggtg
     3121 ttggtcagct ggttcgcgtc gagcccggag atgctggtct cgaccccgat cttgccgaac
     3181 ttgtagtggt tgccctcgac cacggtgaag ttgatgaaat agccgttctt cttggcgtcg
     3241 aactcggcgg tcgccgacgg cacctgcgca tccgggtagc catggttggc gtagtactgc
     3301 tggatcagcg cgcggtcgcc gtcgagctgg tcctgcgtat agctgtcatc cttcagcagc
     3361 cagctcagcc agctcgtctc gtgcgtcttg atgatggatt tgagcgtcca ggagccgatc
     3421 gcgttgttgc cggtgaaatt gatcgcggcg atgccgttgc gcacgccttc gttgatcacg
     3481 aacaccaccc gcacgcggcc atcgcccacc ggctccagcc gcgtggtgac gccgacgttg
     3541 ctgtagccgg cgtccttgta ggcctgcgtg atgctcgcca cgtcgcgcgc cagccccgcc
     3601 tcgtcgacgg tgccgcggtt catcaggtcg atcatggcga tcaaattggc gtcggagaat
     3661 cgctggttgc cctcgaacag ggccgcggcg gcgatcgggt tctcggagac cttcaccacc
     3721 aggatcgacc cctgcatggt caccgatacc gtcttgaaca ggcccgtcgc ctgcagcgaa
     3781 tcgaccgact cgctgagctt ggccgccgtc acgacgtccc cgacattgag cgcgagatat
     3841 ttgtcgacgg ttgccgcatc gacccggctg ttgccgatca ccgtgatctt ggtgaccgtc
     3901 gccgcctggg cggcctcgac cccgacgatc gggcctccta ttcccgccag cggcgctaag
     3961 aacaggagcg caagtgcaag aacggcaccg cgcagcagcc gggtgggatc gatcatgtcg
     4021 taagtgcctc tcagacgaaa ggccggggga atcgccatgc acagctgccc ccagctactc
     4081 tggtcgaagc atttactggt tttttaacca agggcaagct gcaagggtcg gttgcgttag
     4141 cgaaagcttg gcccccgtgc atttgcgcaa caccctgaaa accaaggtta acaaatactt
     4201 agcaggcggc ccgctgtcgc cggcgcagcg cttggcagcg catccgcgcg attgcccttt
     4261 cccgctcgaa aatcgggctc aggagacgtg gcgaagggcg tcgagcaggg tgtcgttgag
     4321 cagcgtgaag atcatcagcg ccccgacgat ggcgaagccc acgcggaaac cgaattcctg
     4381 cgcccgctgg ctcagcggcc gaccgcggat cgcctcgacc aggtagtaga gcagatggcc
     4441 gccgtcgagc accggcaccg gcagcaggtt gaacagcccg atgttcagcg acagcagcgc
     4501 cgcgaggttg atcagcgcca cgatccccag cgtcgccacc tcgcccgaca ccttggcgac
     4561 cttgaccggg ccgcccagct gctcgggatc gccgcgcccg acgaagaagt cgccgatgaa
     4621 cgccaccgtc cggtcgacga tgaagtggat ctggtcgacc gtcatgccga cggcctcgat
     4681 cgggccgggc gtgtagagcg tcacgtccga ggccgcgacg tcgcggctga ccccgatcct
     4741 gccgatgcgc tggacgttgc cgaagcggtc ggtctgctcg accgcatcgg gcaccagccg
     4801 gatcgtccgg tcggcgccgt cccgctccag cacgatcgtc acctgccggc ccggcgcggt
     4861 ggagatgagg cgctggaaat cctcgaaacc gcggacgctg aagccatcga ccgacatgac
     4921 cttgtcgccg gcttcgagcc ccgccgtcgc ggcgatgccg ccgacggtca cgtccgaaat
     4981 caccggcggg atggtgtact ggccgtagct cagcagcagc acgtagagga cgacgaaggt
     5041 aaacgccacg ttcgccagtg gtccggccac caccaccgcg atccgctgcc agacgttctt
     5101 gttgatgaac aggttccgct gctcttcctc gggcagcgcc gctaccgcct cggggtccgg
     5161 catgctgctg gcgttcatgt cgccgacgaa ccgcacgtag ccgcccagcg ggatcatcga
     5221 cagccgccag cgcgtcccgc gccggtcgtt gaagccgatg atctccggcc cgaaaccgag
     5281 cgagaaggtc tggatcgcga cgccattcca gcgcgccacc aggtaatgtc ccatttcgtg
     5341 cacgaacacg atgacggtga gcaccacgat gaaggcgggt acggcgtaga ggaccggcag
     5401 gctgaggaag gacagtttcg tgcgctccgt gggggcgtcg ctctaggcgc cgattgcggt
     5461 cacagttgga cggggtggcg atgcgaatgc ggccaagagc ttctcaccaa tagagaaatc
     5521 cccccgcgac attgccgatc ccgccgtgca gggcgcccac gacgaacagc agcagcacgc
     5581 cgaagctgac gctgtcgagc cgatccatga agcccccgtg cccgggaatg atatcgcccg
     5641 aatccttgat gcggaagacg cgcttgaccg cgctctcggt gatgtcgccc gcctggccga
     5701 cgagccccag caaggccgcc agcagcacgc cgatccacag cggcgaatgc acgaagatca
     5761 accagaagat cgttccggcg acaatgcccg tgatccagcc gccgatcgcc cccgaccagg
     5821 tcttggcggg cgagatcgcc ggcaccagct tgggtccgcc cagcagccgc ccggcgaaat
     5881 aggcgccgct gtcgttgagt gcgatcacga tgcccaggta ccagccggcg gcaatccccg
     5941 ccgggccggc accacgcatc gtcatcgcgg cgatcagcac ggcgccgaaa aacaccagcc
     6001 cgccgacccg ccagccgagc accgcgcggt ccccgaacgt cgccagcagg gcggccagcg
     6061 cgataagggc gatgatcccg agcacgccca gcagcggata gaggatcgcc gccaccgcca
     6121 gcagcccgat cagcgcgaag ccgaatggcc cgagcggcgc cagcgtgatc atctgctccc
     6181 actcgcggta cagcaggccg aacagcaccg ccgccagcac cgcgaaggca tagccgccga
     6241 aatagaggcc ggtcgccgcg acggcgacga tcactgcggc cgacaggacg cgcgggccga
     6301 gatcggtcca ggagggcgcc tggcgcggtg gcggggagcc ggatggggct gacgatgtca
     6361 ccgttgccgc gcctcgacgc ctccatagcg ccgatcgcgg ccggaatagt cctcgagcac
     6421 gcgccgaaac gccgcgtcgt cgaaatccgg ccagttctcc tcgacgaaga ccagttcgga
     6481 ataggcaccc tgccacagca ggaaattcga gaaccgctgt tcgccgctgg tccggatgat
     6541 gaggtccgga tcgggcagcc ccgacgtgta gagcgcccgc ccgatggtgt cttcggtaat
     6601 gtcctcggcc cgcagccgtc ccgcggcgac gagcgaggcg atgcgccgga cggcctcggc
     6661 gatctcggcc ttgccgccat agttgaaggc gacttgcagc ttgagcccgg tgttcatggc
     6721 ggtcgtcgcc tcgacctcgg cgatcagccg gcgcagggaa tcgtcgagcc cctgccgcgc
     6781 cccgatgatc cgcacccgta cattgttgcg gtgcagtttc tcgaggtccg acgcgacgaa
     6841 gcggcgcaac aggccgaaaa tgaagctgat ttcatccttc ggccgcgtcc agttctccga
     6901 cgagaagctg aagaccgtga gatattcgat accgagattg atgcagctct cgaccagccc
     6961 gcgcagggcc cggacgcccg ccacgtggcc ttcggtgcgc ggcttgccgc gggccttcgc
     7021 ccaccggcca ttgccgtcca tgatcacccc gacatgcgcc ggaatccgca ggcctggctc
     7081 tgcggccgct tggggctgtt tggcaggttc actcgacatc ggcggccctc ccgggcctca
     7141 gcggcaggac gcaggctaaa cctgcatgat ttcgcgttcc ttagcggcga gcacggtatc
     7201 gacttcgccg atcgcctcgt cggtcgcctt ttgcacgagg tccgacttgg cgcggctgtc
     7261 gtcctggctc atcacgccgt ctttctcgag cttcttgagc agctccatgc catcgcggcg
     7321 gatgtgccgg atggcgacgc gcgcctgctc ggcatagttg tgcgcgacct tggtcagctc
     7381 gcggcgacgc tcctcgttca gctcgggcag cggcacccgg atcgttgcgc cctcggtcga
     7441 tggattgagc ccgagcccgg aattgcggat cgccttgtcg accgccggtg ccatcgagcg
     7501 gtcccacacc gacacctgca gcatgcgggc ctccggcacc gtcacggtgg cgatctggtt
     7561 gagcggcatc ttggtgccgt aggcctcgac catcaccggc tcgagcaggc tggcgctggc
     7621 gcggccggtg cgcagtcccg tcagctcttc gcgcagcgaa atgatggatt tctgcatccg
     7681 ctgcttcatc tcgtcgagcg agaatgccgg ggcctgtgcc atcgaaccag ctcctatttc
     7741 ttcggatcgg ccgcaggttt cggatcgccc acgagggtgg agcgcgtctt gccgctcaaa
     7801 acccccatca gcccatcctt ctcgccgagt gcgtagacca gtatcggcag cccgttgtcg
     7861 cgcgcaagcg cgaacgccgc cgtgtccatg actttgaggt tgcgacggat gacctcgtca
     7921 tagctgacgg tctcgtagcg cgtcgctttc ggattcttct tgggatcctc ggtatagacg
     7981 ccgtcgacct tggtcccctt gagcagcacg tcgcattcga gctcgatggc gcgcagcgcc
     8041 gccgccgtgt cggtggtgaa gaacgggttg cccgtgccgc cgccgaggac gaccaccaaa
     8101 ccatcgtcca gcgccgcccg cgccgcacgg gcggtatagg tatcggcgac cgacggcatg
     8161 gtcgtggcgc tgaacacttt cgagcgcacc ccctggcgcg agatctcgct cgacagggcc
     8221 agcgcgttga tcacggtgcc cagcgtaccc atcatgtcgg ccgtaacccg gtcggcaccg
     8281 cccgccgcga ccgacatgcc gcgaaagatg ttgccgccgc cgggaacgat ggcgatctgc
     8341 acgccggcct gcgccgcatc gacgatctgc ttggcggtcg ccacgagata ggcggtctcg
     8401 atgccgaacg actggtcgcc cgccagcacc tcgccggaga ccttgagcag gatgcgcttg
     8461 taggcaggct tggtcatggg cgcccctctt cggtgaggcc gagcggcgaa tcctgcgccg
     8521 gcggcgagag gtgtacgtta aaatgcgccc gcgtcacagg gcgccgtgtg cattaagtcc
     8581 ttatttccgc gcgccgattt tgcgcacggg gcaattgcag ccgggcgttt gccgcccggc
     8641 tcgaagcgtc aggcgtgcgg cggcgtggtg ggctgctgcg gcacccccga ggtcgcggca
     8701 acctcggccg cgaagtcggt ttcctgcttc tcgatgccct cgcccagcga atagcgcacg
     8761 aacttggtca ccttgatcgg cgccccggcc tctttctcgg ccctggcgac gatgtcgcga
     8821 accttgctct cgccatcgat gacgaaggtc tgggcgagca gcgtcgattc ctcgaagaac
     8881 ttgcgcaccc ggccctcgac catcttggcg atgacctcgg ccggcttgcc ggtctccttg
     8941 gcctgctcgg tatagatttc acgctccttg gccaccaccg ccggatcgat gtcgtcgggc
     9001 gacaccgaca gcggattggt gttggcgatg tgcatggcga gctgcttgcc gagcccggtc
     9061 agcaccgcct tgtcgccggt cgactcgacg ccgacgatca ccccgagctt gcccatgccc
     9121 ggcttcaccg tgttgtgcac gtacgagccg atgacgccgt ccttgacctc gacgaccgcc
     9181 gagcggcgga ggttcatgtt ctcgccgatc ttggcgatgg catcggtcag ctcggccgca
     9241 accgagcggc cgctgccggg gaacggcatc tcggccagct tctcgatcga ccccttggcc
     9301 tcgagcgcca gcttggcgac gctgccgacg atgccctgga actggtcatt gcgggcgacg
     9361 aaatcggtct ccgaattgac ctcgacgatc gctgccttgg tgccctcggt ggagacgccg
     9421 acgagccctt cggcggcgat gcggccggcc ttcttggcgg ccttggcgag gccgcgcgtg
     9481 cgcagccagt cgaccgccgc ttccatgtcg ccgccggtct cttccagcgc cttcttgcaa
     9541 tccatcatgc cgacgccggt cgattcgcgg agctctttg
//
LOCUS       DATAZA010000104         2343 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3722780, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000104 DATAZA010000000
VERSION     DATAZA010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2343
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3722780"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..189)
                     /locus_tag="VHZ56_02625"
     CDS             complement(<1..189)
                     /locus_tag="VHZ56_02625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003610998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEX4296891.1"
                     /translation="MNENAWSDVDRYIGAQLLADADPVFEAVLRANAAGGLPSIDVSP
                     AQGKFLGLLVRIAGARRIL"
     gene            complement(387..>2343)
                     /locus_tag="VHZ56_02630"
     CDS             complement(387..>2343)
                     /locus_tag="VHZ56_02630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEX4296892.1"
                     /translation="ARPDGSIIETPITANFKEGLNVLEYFNSTHGARKGLADTALKTA
                     NSGYLTRRLVDVAQDSIITELDCGTDKGLTMEAIVDAGQIVATLGQRILGRTTAENIV
                     HPETGKTIIKKNVLLAEKDVDVIEAARVQSVKIRSPLTCELRTGCCAACYGRDLARGT
                     PVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGTAQVVDTSFLEAGAEGKIAIRNANVA
                     KVSGGRLVVMARNVALAILDGDGKERSVHKVAYGAKLLVNEGDEVKRGQRIAEWDPYT
                     RPVLAETDGEAAFEDLVDGASMAETTDETTGFTKRLVTDWRTNQRGENLKPAITITRK
                     GVVAKVDRGGDARYLLSVDAVIAVEPGDKVSAGDVLARIPLESAKTKDITGGLPRVAE
                     LFEARRPKDHAIIAEIDGTIKFGRDYKNKRRVIIEPEDKSLEPAEYLIPKGKPFHLQE
                     GDSIEKGEYILDGNPAPHDILAIKGVEELARYLVNEIQEVYRLQGVLINDKHIEVIVR
                     QMLQKVEIINPGDSGMLKDEQLDKLDFDELNDQLVADGKKPATANPVLLGITKASLQT
                     RSFISAASFQETTRVLTEAAVSGKADLLEGLKENVIVGRLIPAGTGASTTKQKEIATK
                     RDELILDERRRQAETARLEAPAPEPAE"
BASE COUNT          322 a          769 c          806 g          446 t
ORIGIN      
        1 gaggatgcgc cgggcgccgg cgatgcgcac cagcaggcca aggaacttcc cctgcgccgg
       61 cgacacgtcg atcgagggca ggccgccggc ggcgttcgcc cgcagcaccg cttcgaacac
      121 cgggtcggcg tcggcaagga gttgtgcgcc aatgtagcgg tcgacgtccg accaggcgtt
      181 ttcgttcatc cgggatctcc gcgctgtcgg cgactgcgtt agtcccgccc tcgcctgcgt
      241 gcaagccggc gcgtcggtaa gcggtccgac atcaggcatg gtggaattgg ctgtcatgag
      301 gcggacgatt gggtccggca gccttcgccc agaaaacgaa agggccccgc gaggggccct
      361 tcctgactgt ttcgatcgct gcggccttat tcggccggct cgggcgcggg ggcctcgagc
      421 cgggccgtct cggcctggcg gcggcgctcg tcgaggatga gctcgtcgcg cttggtggcg
      481 atctccttct gcttggtcgt ggaggcgccg gtgcccgccg ggatcagccg gccgacgatg
      541 acgttctcct tgaggccttc gagcaggtcg gccttgccgg aaaccgccgc ctcggtgagg
      601 acgcgggtgg tctcctggaa cgaggccgcc gagatgaagc tgcgggtctg cagcgacgcc
      661 ttggtgatgc ccagcagcac ggggttggcc gtggccggct tcttgccgtc ggccaccagc
      721 tggtcgttga gctcgtcgaa atcgagcttg tcgagctgct cgtccttgag catgccggag
      781 tcgcccggat tgatgatctc gaccttctgc agcatctgcc ggacgatgac ctcgatgtgc
      841 ttgtcgttga tgagcacgcc ctggaggcga tagacctcct ggatctcatt gacgaggtag
      901 cgcgccagct cctcgacgcc cttgatcgca aggatgtcgt gcggggccgg gttgccgtcg
      961 aggatgtact cgcccttctc gatggagtcg ccttcctgca gatggaacgg cttgcccttc
     1021 gggatcaggt actcggcggg ctcgaggctc ttgtcctcgg gctcgatgat gacgcggcgc
     1081 ttgttcttgt agtcgcgtcc gaatttgatc gtgccgtcga tctcggcaat gatcgcatgg
     1141 tccttcggac gccgggcctc gaacagctcg gccacccgcg gcaggccgcc ggtgatgtcc
     1201 ttggtcttgg cgctctcgag cgggatacgc gcgagcacgt cgccggccga caccttgtcg
     1261 cccggctcga ccgcgatgac cgcgtcgacg ctcagcagat agcgggcatc gccgccgcgg
     1321 tcgaccttgg ccaccacacc cttacgggtg atggtgatcg ccggcttgag gttctcgccg
     1381 cgctggttgg tccgccagtc ggtgacgagg cgcttggtga agcccgtggt ctcgtcggtg
     1441 gtttccgcca tcgaggcgcc atcgaccaga tcctcgaacg ccgcctcgcc gtcggtctcg
     1501 gccagcaccg ggcgggtata cggatcccac tcggcgatgc gctggccgcg cttgacctcg
     1561 tcaccctcgt tgacgagcag cttggcgccg tatgccacct tgtgcaccga ccgctccttg
     1621 ccgtcgccgt cgaggatggc gagcgcgacg ttgcgcgcca tgaccaccag ccggccgccc
     1681 gagaccttcg ccacgttggc gttgcggatg gcgatcttgc cttccgcgcc ggcctcgagg
     1741 aacgaggtgt cgaccacctg cgccgtgcca ccgatgtgga acgtgcgcat ggtgagctgg
     1801 gtacccggct caccgatcga ctgcgccgcg atgacgccca ccgcctcacc gatgttgacc
     1861 ggcgtaccgc gagccaggtc acggccgtag caggccgcgc agcacccggt gcggagctcg
     1921 caggtcagcg gcgagcggat cttgaccgac tgcacgcggg ccgcctcgat cacgtcgacg
     1981 tccttctcgg cgagaagcac gttcttcttg atgatggtct tgccggtctc ggggtgaacg
     2041 atattctcgg ccgtggtgcg gccgaggatg cgctgcccga gggtcgccac gatctggccg
     2101 gcatcgacga tcgcctccat cgtgaggccc ttgtcggtgc cgcaatcgag ctcggtgatg
     2161 atcgagtcct gcgccacgtc gaccagacgc cgcgtcaggt agcccgagtt cgcggtcttc
     2221 agcgccgtat ccgcgagacc cttgcgggcg ccgtgggtgg agttgaagta ctcgagaacg
     2281 ttgaggcctt ccttgaagtt ggcggtgatc ggggtctcga tgatcgagcc gtccggacgc
     2341 gcc
//
LOCUS       DATAZA010000105         4847 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1401733, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000105 DATAZA010000000
VERSION     DATAZA010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4847)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4847)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4847
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1401733"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..819
                     /locus_tag="VHZ56_02635"
     CDS             <1..819
                     /locus_tag="VHZ56_02635"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX4296893.1"
                     /translation="LKPTYGSVPKAGAIGLAPSMDHLGPISASVGDAALTLDVIAGRS
                     GPEAAASRLGQPIAGLRVGYARNWFASDPQAMPEIVAAMDAALSQLSLLGVIVQQVEL
                     PDYDLFEAAGAAILHAEAFKLHAADLRDHPEAYGRKSFQTLVTGVALTEPQYRAALQA
                     GVALRSRLDAVLDDVDALVTACTLTTALPVAAFGTSAVWTPMRTIGFNVTGHPVLALP
                     IRLSDEGLPIGMQIVGKHLDEAVICQLGDAFERSAGTADLVPPPVTAATRKAAV"
     gene            913..2238
                     /gene="hisD"
                     /locus_tag="VHZ56_02640"
     CDS             913..2238
                     /gene="hisD"
                     /locus_tag="VHZ56_02640"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEX4296894.1"
                     /translation="MAKWLKRGKDVAARAEADRQVRATVEGILADIEQRGDDAVRDLS
                     RKFDGWDRPDFRLSQSEIDACMAELSDQDLSDIAFAQTQVRNFAEKQKATMLELSVET
                     LPGVTLGHRHIPIAAVGCYVPGGKYPLLASAHMSVLTAKVAGCGRVITAAPPFHGKAA
                     PAIVAAQHMAGADEIYVLGGVQAIAAMAIGTQTIKPVDMLVGPGNAFVAEAKRQLYGR
                     VGIDLFAGPTETLIIADETVDGEICATDLLGQAEHGPTTPAILLTNSEKLARDTMAEI
                     ERLLGILPTGEIARKSWTDFGEVIVCDSYDELLAEADRIASEHVQVMTDRDLWFRDNL
                     SNFGAVFLGPRTNVAFGDKVIGTNHTLPTMKAARYTGGLWVGKFLKTCTWQIVATDEA
                     SAMVGEYASRLCMLEGFAGHAEQANIRIRRYGGRNIPYATAASPRAAAE"
     gene            2242..3006
                     /locus_tag="VHZ56_02645"
     CDS             2242..3006
                     /locus_tag="VHZ56_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011969919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4296895.1"
                     /translation="MTLLRTPSLRVDGKRALVTGGTRGIGLAAATALAEAGAAVTVVA
                     RHATEVDEVVASLEAAGYTADGRAFDVTDHAAARAFVEAAEPYDVLVNSAGIARHAPF
                     LDITDADYRSVMEINVAATLFLSQAVARRLVAAGRPGSIIHISSQMGHVAGPSRALYA
                     ASKHAVEGLARGMAIDLAPHNIRVNSICPTFIETALSAKSLADPDFRAWVLGKIKLGR
                     LGRLEEIMGPVVFLASEASSLMTGSSLMVDGGWTAE"
     gene            3024..4070
                     /locus_tag="VHZ56_02650"
     CDS             3024..4070
                     /locus_tag="VHZ56_02650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007199017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX4296896.1"
                     /translation="MTSSQVAEHAGVSQSAVSRTFTPGASISSKTRTKVLASAKQLGY
                     RPNAIARSLITSRSRIIAVVMAYLENLFYPDVLEELGRRLAAENYHVLLFTGFKDRDS
                     DPVFDQLMQYRVDGIILASTSLSSQLSEECTVAGIPVVLFNRTTEREAASSVTTRNRE
                     GGRLLADFLVAGGHKSFGYISGLESASTNRDRLSGFRDGLAAAGFDKIEVRTGNYNRA
                     DAEAATRDLLSLRKRPQAIFVANDHMAVAAMDVARYEFGLSIPDDLSIVGYDDVGPAR
                     WPSYGITSVTQPIVPMVEATVDILMDQIASGEIEPQHRVIAGELIVRTSARLPRKGIV
                     ERNGVKLYKPAGSH"
     gene            4135..>4847
                     /locus_tag="VHZ56_02655"
     CDS             4135..>4847
                     /locus_tag="VHZ56_02655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin"
                     /protein_id="HEX4296897.1"
                     /translation="MTKWTQEAMEKRLVRYADLKGLRNAFIDARTPGSDRKENFTIIG
                     PGVSENPAQVVHIPEAHGFNFGAARQPFGCTNSQHSHLTAETFLVHTGKWRLVFGANK
                     DEGYLDVEPGDVATVPTLMFRGFEKRDEGTGFLAVVLGHDDPGKVVWAPSVFKMAEDF
                     GLKLLKGGKLVDTTLGEKVPAGAEMEQPPDTAKLKELATPPMSELKNYAVRAADMQGN
                     PNSPLAGAGVEEDALIGDV"
BASE COUNT          806 a         1753 c         1522 g          766 t
ORIGIN      
        1 ctcaagccga cctacgggtc cgtcccgaag gccggcgcca tcggcctcgc gcccagcatg
       61 gaccatctgg gtccgatcag cgccagcgtc ggcgatgcgg cgctcaccct cgatgtcatc
      121 gccggtcggt ccggccccga ggcagcggcg agccgtctcg gccagcccat cgccggcctt
      181 cgtgtcggct atgcccgcaa ctggttcgcc agcgatccgc aggcgatgcc ggagatcgtc
      241 gccgcgatgg atgcggcgct ctcgcagctt tcgctgctcg gggtcatcgt ccagcaggtc
      301 gagctgcccg actacgacct gttcgaggcc gccggcgccg cgatcctcca cgccgaagcg
      361 ttcaagctgc atgccgccga tctgcgcgat catccggaag cctacggccg caagtcgttc
      421 cagactctcg tcaccggcgt ggcgctcacc gagccccagt atcgcgccgc gctgcaggcc
      481 ggggtcgcgc ttcgctcccg gctcgatgcg gtgctcgacg acgtcgatgc gctggtgacg
      541 gcctgcaccc tgaccaccgc gctgcccgtt gcggccttcg gcacgtccgc cgtctggacg
      601 ccgatgcgca cgatcggctt caacgtcacc gggcatcccg tgctcgcctt gcccatcagg
      661 ctcagcgacg agggacttcc catcggcatg cagatcgtcg gaaagcatct cgacgaggcg
      721 gtcatctgcc agctcggcga cgccttcgag cggtcggccg gcaccgctga cctggtgccg
      781 ccgccggtga ccgcggcaac ccgcaaagct gcggtgtgaa ccggtacaat ccgggcgaca
      841 ccgtcttcac attgttgcat acgtatgcaa cataggcggc cgtaagcgcc gaaagaagcg
      901 acagaggaaa ttatggcgaa atggctgaag cgcggcaagg atgttgccgc gcgcgcagag
      961 gcggaccggc aggtgcgcgc cacggtcgag ggcatcctcg ctgacatcga gcagcgcggc
     1021 gacgacgcgg tgcgcgacct gtctcgcaaa ttcgacggtt gggatcgccc cgatttccgc
     1081 ttgtcgcagt ccgagatcga cgcttgcatg gccgagctca gcgaccagga tctgtccgac
     1141 atcgccttcg cccagacgca ggtgcgcaac ttcgccgaaa agcagaaggc gacgatgctc
     1201 gagctgtcgg tcgagacgct ccccggcgtc accctcggcc accgccacat ccccatcgcc
     1261 gccgtcggct gctacgtccc gggcggcaag tacccgctgc tggcgtccgc ccacatgtcg
     1321 gtgctcacgg cgaaagtcgc cggctgcggc cgcgtcatca ccgccgcccc gccgttccac
     1381 ggcaaggccg ccccggcgat cgtcgctgcg cagcacatgg ccggcgccga cgagatctac
     1441 gtactcggcg gcgtgcaggc gatcgccgcc atggccatcg gcacccaaac catcaagccg
     1501 gtcgatatgc tggtcgggcc cggcaatgcg tttgtcgccg aggccaagcg ccagctctac
     1561 ggccgcgtcg gcatcgatct gttcgccggt cccaccgaga cgctgatcat cgccgacgag
     1621 accgtcgacg gcgaaatctg cgccaccgac ctgctcggcc aggccgagca cggccccacc
     1681 acgcccgcca tcctcctcac caattccgag aagctggcgc gcgacaccat ggccgaaatc
     1741 gagcggctgc tcggcatcct gcccaccggc gagatcgccc gcaagtcgtg gaccgacttc
     1801 ggcgaagtca tcgtctgcga cagctacgac gagctgctgg ccgaagccga ccgtatcgcc
     1861 tccgagcatg tgcaggtgat gacggaccgc gatctgtggt tccgcgacaa cctcagcaac
     1921 ttcggcgccg tgttcctcgg gccgcgcacc aatgtcgcgt tcggcgataa ggtcatcggc
     1981 accaatcaca cgctgcccac catgaaggcg gcgcgttaca ccggcggcct gtgggtgggc
     2041 aagttcctca agacctgcac ctggcagatc gtggccaccg acgaggcctc cgccatggtc
     2101 ggcgaatatg cctcgcgcct ctgcatgctc gagggctttg ccggccacgc cgaacaggcc
     2161 aatatccgca tccgccgcta cggcggccgc aacatcccct atgcaactgc ggcgagcccc
     2221 cgggccgctg ccgaatgacc gatgaccctg ctccgcacgc ctagcctcag agtcgacggc
     2281 aagcgcgccc tggtcaccgg gggcacgcgc ggcatcggcc tggccgcggc gaccgcgctg
     2341 gcggaagcgg gcgcggcggt gacggtcgtg gcgcgccacg cgaccgaggt ggacgaggtc
     2401 gtcgcatcgc tcgaggccgc cggctacacc gctgatggcc gcgctttcga tgtgaccgac
     2461 cacgccgccg cgcgggcgtt tgtcgaggcc gccgaaccct atgacgtgct ggtcaacagc
     2521 gccggcatcg cgcgccacgc gccgtttctc gacatcaccg acgccgacta tcggtcggtg
     2581 atggagatca acgtcgcggc caccctgttc ctgtcgcagg ctgtcgcccg ccggctcgtt
     2641 gctgccggcc ggcccggttc gatcatccac atctcctcgc agatggggca cgtcgccggc
     2701 ccaagccgtg ccctctacgc cgccagcaag cacgccgtcg agggcctggc ccggggcatg
     2761 gcgatcgacc tcgcacccca caatattcgg gtgaactcga tctgtccgac cttcatcgag
     2821 accgcgcttt ctgcgaaaag tcttgccgat ccggacttca gggcctgggt cttgggcaag
     2881 atcaagctcg gccgcctcgg ccggctcgag gagatcatgg ggccggtggt gttcctcgcg
     2941 tcggaggcat cgtcgctgat gaccggctcg tcgctgatgg tggatggcgg atggacggcg
     3001 gagtaatcgg caagaagcct tccgtgacct cctcgcaggt cgccgagcac gccggcgtct
     3061 cgcagtcggc ggtgtcgcgc accttcacgc ccggtgcctc gatctcgtcc aagacgcgca
     3121 ccaaggtcct cgcctccgcc aagcagctcg gctaccgccc gaacgccatt gcccgctcgc
     3181 tcatcacctc gcgctcgcgc atcatcgcag tggtgatggc ctatcttgaa aacctgttct
     3241 accccgacgt cctcgaggag ctgggccgcc gcctcgcagc cgagaactac cacgtgctgc
     3301 tgttcaccgg cttcaaggac cgcgactccg atccggtgtt cgaccagctg atgcagtatc
     3361 gcgtcgatgg catcattctc gcctccacct cgctcagttc ccagctcagc gaggagtgca
     3421 ccgtggccgg cattcccgtc gtgctcttca accgcaccac cgagcgcgag gcggcatcct
     3481 cggtcaccac gcgcaaccgc gaaggcgggc ggctgctcgc cgatttcctg gtcgccggtg
     3541 gccacaagag cttcggctac atctccggcc tcgagagtgc ctccaccaac cgcgatcgcc
     3601 tctccggctt ccgcgatggc ctcgcggcgg ccggcttcga caagatcgaa gtccgcaccg
     3661 gcaattacaa tcgcgccgat gccgaagcgg cgacgcggga tctgttgtcg ctccgcaagc
     3721 ggccgcaggc gatcttcgtc gccaacgacc acatggccgt cgccgccatg gacgttgccc
     3781 gctacgaatt cggcctgtcg attcccgacg acctctcgat cgtcggctac gacgacgtcg
     3841 gccccgcccg ctggcccagc tatggcatca cctcggtgac gcagccgatc gtgccgatgg
     3901 tcgaggcgac ggtcgacatc ctgatggatc agatcgcctc cggcgagatc gagccgcagc
     3961 acagggtgat cgccggcgag ctcatcgtcc gcacctccgc gcggctgccc agaaagggca
     4021 tcgtcgagcg caatggagtg aagctctaca aacccgccgg ctcgcactga ccgaggactt
     4081 tggtcggcgc gcgctgtgca tacgaatgca aattgtgagt gaaaggatac tcggatgacc
     4141 aaatggactc aggaggcgat ggaaaagcgg ctggtccgct acgccgacct caagggattg
     4201 cgcaacgcct tcatcgacgc ccgcacgccg ggctccgacc gcaaggagaa cttcaccatc
     4261 atcgggcccg gcgtctccga gaacccggcc caggtggtgc acatccccga agcccacggc
     4321 ttcaatttcg gcgccgcgcg ccagcccttc ggctgcacca attcgcagca cagccacctc
     4381 acggccgaga ccttcctcgt ccacaccggc aagtggcgcc tcgtcttcgg cgccaacaag
     4441 gacgagggtt acctcgacgt cgagccgggt gacgtggcaa ccgtacccac cctcatgttc
     4501 cgcggcttcg agaagcgcga cgagggcact ggctttctcg ccgtggtgct cggtcacgac
     4561 gatccgggca aggtggtctg ggccccgtcg gtgttcaaga tggccgagga tttcggcctg
     4621 aagctgctca agggcggcaa gctcgtcgac accacgctcg gcgagaaggt gccggcgggc
     4681 gccgagatgg agcagccgcc ggataccgcc aagctcaagg agctggccac cccgccgatg
     4741 agcgagctca agaactacgc cgtcagggcc gccgacatgc agggcaaccc gaactcgccg
     4801 ctcgccggcg cgggcgtcga ggaagacgcg ctgatcggcg acgtcga
//
LOCUS       DATAZA010000106         6871 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3258606, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000106 DATAZA010000000
VERSION     DATAZA010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6871
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3258606"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1103)
                     /locus_tag="VHZ56_02660"
     CDS             complement(<1..1103)
                     /locus_tag="VHZ56_02660"
                     /inference="COORDINATES: protein motif:HMM:NF024882.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HEX4296898.1"
                     /translation="MPARPLLEAPAPAPAIAITIPVRLIGIVMLAIVVAVMAALASWS
                     VDDPSLSYAASKPVANWLGFPGAVIADLSFQVLGLGIIVLLIPPACWGWSFVRRRVPS
                     RLGLRLVAWLATVILATGVLAFLPAPASWPLPTGLGGLVGSGFTRLAALVTGEHPQRI
                     TAWLFAVILVAPTLALFWTALGVGAINLPTPASRKKRGQAPADEPERNGILDVLIGAL
                     VHLGFSAAAALRRAMTQARENAAARREADAAEWRTGSEPRVAGAAPEVSLGADARREP
                     ALGIDRRYTAASEPAIEDDYPPEDDADIEIAPARPARIVAPAKRPAPGARAAREAQPS
                     LLETESGFELPALNLLSEAKHRGLADEHRPERL"
     gene            complement(1419..2621)
                     /locus_tag="VHZ56_02665"
     CDS             complement(1419..2621)
                     /locus_tag="VHZ56_02665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013948071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HEX4296899.1"
                     /translation="MLTSMALVLMMTIPGLGLFYGGMVRKKNVLATVMQSFAITCVVT
                     ILWFVIGYSAAFTNNDPAAPGAFIGSFAHFFLSGIGPNSVNPLAGTIPENVFNAFQMT
                     FAIITPALICGAFAERFKFSAMLLFMTLWLLFVYVPIAHWVWGGGFLGNLGVLDFAGG
                     TVVHINAGVAGLVCALVLGKRKGFGSTNMAPHNLVLTFIGAGLLWVGWFGFNAGSAGA
                     ANGLAGAAMMNTQVATAAAALAWMFVEWAVVKKPSVLGILSGAVAGLVAVTPASGFVN
                     VSGAFVVGIVAGAGCYYAAAHLKKMLGYDDSLDAFGVHGIGGIIGALLTGFLADPAVN
                     GHAGLFFGNPGQVWTQVEGIAVTIVWTAVVSWIILMICRFTLGLRPTEQEEEEGLDIT
                     QHGESVAE"
     gene            complement(2837..3175)
                     /locus_tag="VHZ56_02670"
     CDS             complement(2837..3175)
                     /locus_tag="VHZ56_02670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEX4296900.1"
                     /translation="MKLVIAIIKPSRLEEVRQALNSLDVHGMTVTEVKGYGRQKGHSE
                     IYRGTEYAVHFLPKLKIEIAVEDAQSDPIVSAIRESAQTGRIGDGKIFVLDLLAVTRI
                     RTGETGAAAL"
     gene            3453..4670
                     /locus_tag="VHZ56_02675"
     CDS             3453..4670
                     /locus_tag="VHZ56_02675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX4296901.1"
                     /translation="MSDDRYDVIIVGGGPVGLSMALALSRFQRGLKLALVDRRPFTVP
                     DDKRAFALSAGVRRVLDTLGVWPAIQPQATAIEAMVVTDSGGDDLSRPVFLSFAGDVA
                     PGEPYAHMVANRTLTAALLAAVGERAELIAPAEVAGFSAGPASAALALRDGRTLRAPL
                     VVAADGAMSGLRRLAGIDVVAHDYRQAGIVTTIAHDLPHEGTAYEHFRPAGPFASLPL
                     GGNRSSLVWTETSAEAARLKELPPEEVAVLIEAAMGSRLGKVRIEEGLQSFPLRLQLA
                     RSFVAPRLALIGDAAHVIHPLAGQGLNLGLKDVAALSEAVVEALRLGRDAGAADVLAG
                     YERWRRFDATLMAAVTDNLNRLFSNDVPPVRALRDIGLGLVDRLPAVKAALIARAAGI
                     EANGPRLLRGLPL"
     gene            complement(4688..4918)
                     /locus_tag="VHZ56_02680"
     CDS             complement(4688..4918)
                     /locus_tag="VHZ56_02680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HEX4296902.1"
                     /translation="MADAPERRYEIDPRTLEMLVCPLTKTRLVLSADHTELISVAAHL
                     AFPIREGVPMLSLDEARDVDPDEMRVQFPPAV"
     gene            complement(4932..5594)
                     /locus_tag="VHZ56_02685"
     CDS             complement(4932..5594)
                     /locus_tag="VHZ56_02685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEX4296903.1"
                     /translation="MLIRPASPADLPQHLPVFPLSGALLLPFSHRPLNVFEPRYVEMV
                     DQALAGNRLIGLIQPEDASEESPRGRAPLQKIGTVGRLSHWEENGEGRYFIILEGLTR
                     FELVSELTTLTPFRQAVISAERFALDFTRAYGEDAVDRPRFLKMMKDYAEFANFELNW
                     DEINKTGTADLVNFACMVSPYGAKEKQVLLEASSLETRAETLIALAEFEMAKGGGGVP
                     LQ"
     gene            complement(5594..6535)
                     /gene="trxA"
                     /locus_tag="VHZ56_02690"
     CDS             complement(5594..6535)
                     /gene="trxA"
                     /locus_tag="VHZ56_02690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEX4296904.1"
                     /translation="MNVNISSAPAAAPPPAVLVKDSTDRAFKADVIDASLEAPVLVDF
                     WAPWCGPCRTLSPTIEKVVKEKQGKIRLVKINIDENPAIAGQLGVQSIPAVFAFAGGR
                     PVDAFIGAYPESEVRKFADKVIAAAPPAPSQAGSLEDEIKGAMLAAGEALAAGDLNTA
                     AQVFGMVLQHQPEHAEALLGMARVYLKAGETAQAQAVFDTIPAAARKGADYTSLAAEL
                     KLLGEAEKLGGTADLQRQLDKSPDDHQARFDLAIALNAEGKRVEAAEQLVALMKRDRT
                     WNEDGARRKLLDFFEAWGMKDPATLKGRRMLSALLFA"
     gene            6698..6772
                     /locus_tag="VHZ56_02695"
     tRNA            6698..6772
                     /locus_tag="VHZ56_02695"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6730..6732,aa:Gly,seq:gcc)
BASE COUNT         1070 a         2170 c         2567 g         1064 t
ORIGIN      
        1 tcgagccgct ccgggcggtg ctcgtcggcg aggccgcgat gcttggcttc cgacaggagg
       61 ttgagggccg gcaattcgaa gccggattcg gtctcgagca gcgagggctg cgcctcgcgc
      121 gcggcgcgcg caccgggcgc cgggcgcttc gccggggcga cgatgcgggc ggggcgggcc
      181 ggcgcgatct cgatgtcggc gtcgtcctcg gggggatagt cgtcttcgat cgccggctcg
      241 ctggcggcgg tgtagcggcg gtcgatgccg agggccggct cgcgccgcgc atcggcgccg
      301 aggctgactt ccggcgcggc cccggcgacg cgcggctcgc tgccggtgcg ccattcggcg
      361 gcatcggctt cgcggcgggc cgcggcgttc tcgcgcgcct gggtcatggc gcggcgcagg
      421 gcagcggcgg cggaaaagcc gaggtgcacg agagcgccga tgaggacgtc gagaatgccg
      481 ttccgctcgg gctcgtcggc cggagcctgg ccgcgcttct tccggctggc gggagtgggc
      541 aggttgatgg caccgacacc gagcgcggtc cagaacagcg ccagggtcgg ggcgacgagg
      601 atcaccgcga acagccaggc ggtgatgcgc tgcggatgct cgccggtgac gagcgcggcg
      661 aggcgggtaa agcccgagcc gacgaggccg ccgaggccgg tcggcagcgg ccagctggcc
      721 ggcgccggca ggaaggcgag gacgccggtc gcgaggatca ccgtcgccag ccaggcgaca
      781 agccgcaggc ccagccgcga cggcacgcgg cggcgcacga agctccagcc ccagcaggcg
      841 ggcggaatca gcagcacgat gatgccgagc cccagcacct ggaagctcag gtcggcgatg
      901 acggcgccgg gaaagccgag ccagttggcg acgggcttgc tggccgcata ggagagcgac
      961 gggtcgtcca ccgaccacga ggcgagggcc gccatcacgg ccacgacgat ggcgagcatg
     1021 acgatgccga tcagccggac cgggatggtg atggcgatgg ccggcgcggg ggccggggct
     1081 tcgagcaggg gacgtgccgg catcgcgggt aacactctac ttgacgtggt ccccgatcct
     1141 aggtgggcgt ggttaatccc aagctaacca tagggatttt gccgtccggc acagcaaaaa
     1201 ggcccgccgt ggggggcggg ccttgcgaag cgatccggcc gggtgtgcag cccatgcagt
     1261 ttgcgagtgg gaagcctctg tggcgggcca agaggaacat gagctgcacg ccgggcggga
     1321 cggtggagag ggacagcccg gccgcaaccg ggctgtccgg gatcgcctgg cgcgggtcgc
     1381 tcggggagga gacgacgccc gcgccaggaa ggcttgtgct actcggcgac gctttcgccg
     1441 tgctgcgtga tgtcgaggcc ttcctcttct tcctgctcgg tcggacgcag gcccagggtg
     1501 aagcggcaga tcatcaggat gatccagctg accacggcgg tccacacgat ggtcaccgcg
     1561 atgccttcga cctgggtcca gacctggccc ggattgccga agaacaggcc ggcatggccg
     1621 ttgacggcag gatcggccag gaagcccgtg agcagggcgc cgatgatgcc gccgatgccg
     1681 tggacaccga aggcgtcgag cgagtcgtcg tagccgagca tcttcttcag atgcgcggcg
     1741 gcgtagtagc agccggcgcc ggcaacgatg ccgacgacga aggcgccgct gacattgacg
     1801 aagccggagg cgggggtgac ggcaacgagg ccggcgaccg cgcccgagag gatgccgagg
     1861 acgctcggct tcttgaccac ggcccactcg acgaacatcc aggccagggc cgccgcggcg
     1921 gtcgccacct gggtattcat catggccgca ccggcaaggc cgttggcggc gccggcggag
     1981 ccggcgttga agccgaacca gccgacccac agcaggcctg cgccgatgaa ggtcagcacg
     2041 aggttatgcg gcgccatgtt ggtggagccg aaacccttgc gcttgccgag gacgagggca
     2101 cagacgaggc ccgcgacacc ggcattgatg tgcaccacgg tgccgcccgc gaagtcgagc
     2161 acgccgaggt tgccgaggaa gccgccgccc cacacccagt gggcgatcgg cacgtagacg
     2221 aagagcagcc acagcgtcat gaacagcagc atcgccgaga acttgaagcg ttcggcgaag
     2281 gcaccgcaga tcagcgccgg ggtgatgatc gcgaaggtca tctggaaggc gttgaagacg
     2341 ttctccggga tggtgccggc gagcgggttc accgaattcg gcccgatgcc cgacaggaag
     2401 aagtgcgcga aggagccgat gaaggcgccc ggcgcggccg ggtcgttatt ggtgaaggcg
     2461 gccgaatagc cgatgacgaa ccacaggatg gtcacgacgc aggtgatggc gaaggactgc
     2521 atgacagtcg ccagcacgtt cttcttgcgc accatgccgc cgtagaacag cccaaggccc
     2581 ggaatggtca tcatcaggac cagggccatg gaggtgagca tccaggcggt gtcgcccgaa
     2641 ttgatcggcg aggcggctgc cgcgtcggca gcgggagcgg cggccgctgc agtggcatcc
     2701 gccgcggcgc tgacggccga ggaggcgtcc tgggccagag ccggcagggt ggcggcgagc
     2761 gctaccagtc cccccagccc cagcagggtc gagatttttt gcagtttcat tttcccttgt
     2821 tctcctgaag ccggtgctag agggccgccg cgccggtctc accggtgcgg atgcgggtga
     2881 cggcgagcag gtcgagcacg aagatcttgc cgtcgccgat gcggccggtc tgggcgcttt
     2941 cccggatggc cgagacgatc gggtccgact gggcgtcctc gaccgcgatc tcgatcttga
     3001 gcttgggcag gaagtgcacg gcatattcgg tgccgcggta gatttccgaa tgccccttct
     3061 gccggccgta gcccttgacc tcggtcacgg tcatgccgtg cacgtcgagc gagttgagcg
     3121 cctgacgcac ctcctcaagc cgcgatggct tgatgattgc gatcaccagt ttcatggatg
     3181 cccctttccg attgccttgg tctccaatgc ctgcaacaga ctcaaatgcc gtgccaaacc
     3241 tcccgccagc gacccaagat tatgattccg ttaagggatt tcgcgggcgc caactgccga
     3301 ggaaagcggc atcgatccgc cgcggcatat ttctgcacaa tgattgtgca aatcgagcgc
     3361 cgttgccggt tattcaggca gcggggaacg gcttgccgct tgcttcggca gcgacgctgg
     3421 cggacaacgc ggcaaactga gaggatcgag cgatgagcga cgatcgctat gatgtcataa
     3481 ttgtcggggg cggcccggtc ggcctgtcga tggcgctggc gctgagccgc ttccagcgcg
     3541 gactcaaact ggcgctggtt gaccgccgcc cattcaccgt gccggacgac aagcgggcgt
     3601 tcgcgctttc ggccggcgtg cggcgggtgc tcgacacgct cggggtgtgg ccggcgatcc
     3661 agccgcaggc gaccgcgatc gaggcgatgg tggtcaccga ttcgggcggc gacgacctgt
     3721 cgcggccggt gtttctcagc tttgccggcg acgtcgcgcc gggcgagccc tatgcccaca
     3781 tggtcgccaa ccgcacgctg acggcggcgt tgctggcggc ggtcggcgag cgggcggagc
     3841 tgatcgcgcc ggcggaggtc gcgggcttct cggccgggcc ggcgagcgcc gccctggcgc
     3901 tgcgcgacgg ccgcacgctg cgggcgccgc tggtggtggc cgcagacggg gcgatgtcgg
     3961 gcctgcggcg cctcgccggg atcgacgtgg tggcgcacga ctaccggcag gcggggatcg
     4021 tcaccaccat cgcgcacgac ctgccgcacg agggtaccgc ctacgagcat ttccggccgg
     4081 ccggcccgtt cgcgagcctg ccgctgggcg gcaaccgctc gtcgctggtg tggaccgaaa
     4141 cgagcgccga agcggcgcgg ctcaaggagc tgccgccgga ggaagtcgcc gtgctgatcg
     4201 aggcggcgat ggggtcgcgg ctgggcaagg tgcggatcga ggaaggcctg cagagctttc
     4261 cgctgcggct gcaactggcg cgcagtttcg tcgcgccgcg gctggcgctg atcggggacg
     4321 cggcgcatgt catccatccg ctcgccgggc agggactcaa tctcggcctc aaggacgtcg
     4381 cggcgctgag cgaggcggtg gtcgaggcgc tgcggctcgg tcgcgacgcc ggggcagcgg
     4441 acgtgctggc ggggtacgag cgctggcggc ggttcgacgc gacgctgatg gcggcggtga
     4501 ccgacaatct caaccggctg ttctcgaacg atgttccacc ggtgcgggcg ctgcgcgaca
     4561 tcggcctcgg cctggtcgac cggctgccgg cggtgaaggc ggcactgatc gcacgcgccg
     4621 cgggcatcga ggccaacggg ccgcggctgc tgcgcggcct gccgctgtag cagttttccc
     4681 cgagcagtca gactgccggc gggaactgca cgcgcatctc gtcggggtcg acgtcgcggg
     4741 cctcatcgag gctcagcatc ggcacgccct cgcggatggg gaaggcgagg tgggcggcga
     4801 ccgagatcag ctcggtgtgg tcggcgctca gcaccaggcg ggtcttggtc agcgggcaga
     4861 ccagcatctc gagggtgcgc ggatcgattt cgtagcggcg ctccggggcg tcggccatcg
     4921 ctgctgcccc gctattgcag cggcacgccg ccgccgccct tggccatctc gaactcggcc
     4981 agcgcgatca gcgtctcggc ccgggtctcg agcgagctcg cctcgagcag cacctgcttt
     5041 tccttggcgc catagggcga gaccatgcag gcgaaattga ccagatcggc ggtgccggtc
     5101 ttgttgatct cgtcccagtt gagctcgaaa ttggcgaact cggcgtagtc cttcatcatc
     5161 ttgaggaagc gcggccggtc gactgcgtcc tcgccatagg cgcgggtgaa gtcgagggca
     5221 aagcgctcgg ccgagatcac cgcctggcgg aacggggtga gggtggtgag ctcggagacg
     5281 agctcgaagc gggtgaggcc ttcgaggatg atgaagtagc ggccctcacc gttctcctcc
     5341 cagtggctga gacggccgac ggtgccgatc ttctggagcg gcgctctacc acgggggctt
     5401 tcctccgagg cgtcctcggg ctggatcagt ccgatcagcc ggttgccggc cagcgcctgg
     5461 tcgaccattt cgacgtagcg cggctcgaag acgttgagcg gccggtgcga gaacggcagc
     5521 agcagggcgc ccgacagcgg gaacaccggc aggtgctgcg gcaggtcggc gggcgaggcg
     5581 gggcgtatca gcatcatgcg aacaggaggg cgctcagcat cctcctcccc ttgagggtgg
     5641 ccggatcctt catgccccag gcctcgaaga aatcgagcag cttccggcgc gcgccgtcct
     5701 cgttccaggt gcggtcgcgc ttcatcagcg ccaccagctg ctcggcggcc tcgacacgct
     5761 tgccctcggc gttgagagcg atggccaggt cgaagcgggc ctgatggtcg tcgggggatt
     5821 tgtcgagctg gcgctgcagg tcggcggtgc cgccgagctt ttccgcctcg ccgaggagct
     5881 tcagttcggc ggccagcgag gtgtagtcgg cgcccttgcg ggcggcggcg ggaatggtgt
     5941 cgaagaccgc ctgcgcctgc gccgtctcgc cggccttgag gtagacgcgg gccatgccga
     6001 gcagcgcctc ggcatgctcg ggctggtgct gcagcaccat gccgaagacc tgtgcggcgg
     6061 tgttgaggtc gccggcggcc agggcctcgc cggcggcgag catggcgccc ttgatttcgt
     6121 cctcgagcga gccggcctgg ctgggcgccg ggggcgccgc ggcaatcacc ttgtcggcga
     6181 acttccgcac ttcgctctcg gggtaggcgc cgatgaaggc gtcgaccggg cggccgccgg
     6241 cgaaggcgaa aaccgccggg atcgactgca cgccgagctg gccggcaatc gccgggttct
     6301 cgtcgatgtt gatcttgacc agccggatct tgccctgctt ttccttcacc accttttcga
     6361 tggtggggct cagggtgcgg caggggccgc accagggggc ccagaaatcc accagcaccg
     6421 gggcctcgag cgaggcatcg atgacgtcgg ccttgaaggc gcgatcggtc gaatccttga
     6481 ccagcacggc aggcggcggg gcggcggcag gggcggagct gatgttgacg ttcacgggcg
     6541 ggctctcttt tccatttacc cttttcgcat gtcgttgcgg tgccgcgcca gcggcgccgc
     6601 gaacggggcg aatgagggtt gcaaaggcaa tatcgattgg gcatataggc ccgcgtcgcc
     6661 ccgctgccaa gatttcgtgg ccggcgcggc ttggagtgcg ggtgtagctc aggggtagag
     6721 cataaccttg ccaaggttag ggtcgagggt tcgaatccct tcgcccgctc caaaaacaat
     6781 caatttctca agagcttgag acgtctccac gggaggcgtc tcggcttgcc tatatctttg
     6841 gggacgcgtc gggcaggcac tgcgtgcttt t
//
LOCUS       DATAZA010000107         5183 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1053672, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000107 DATAZA010000000
VERSION     DATAZA010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5183
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1053672"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..474
                     /locus_tag="VHZ56_02700"
     CDS             <1..474
                     /locus_tag="VHZ56_02700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296905.1"
                     /translation="SAANLAATLRSWSASAKDPTPLSEAADLLQQSIELTPRDQAAAD
                     WAELESKLGNVWGDMFGFDGKPETADKAVAAYQAAEEVTTADANLDAWAGLELDILDV
                     QLRAGTPTHDIARMKLARDTAATAASILKARGNSQASYFEPVVPALDQYIAAFAK"
     gene            527..1513
                     /gene="denD"
                     /locus_tag="VHZ56_02705"
     CDS             527..1513
                     /gene="denD"
                     /locus_tag="VHZ56_02705"
                     /EC_number="1.1.1.410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-erythronate dehydrogenase"
                     /protein_id="HEX4296906.1"
                     /translation="MHILVIGAAGMIGRKLTQALVATGKVGDRPIERLTLADIVGPEA
                     PRFDGAVETVATDLSAPGAAAAIIARRPDLIFHLAAIVSGEAEADFEKGYRINLDGTR
                     QLLEAIRLEGAKSPYRPRLVFTSSIAVFGAPFPDAIGDEFFSTPLTSYGTQKAICELL
                     LNDYSRKGFVDGVGIRFPTIAVRPGRPNLAASGFFSNILREPLSGKEAVLPVSREVRH
                     WFASPRAAIGFLLHAASLDTAQLGWRRTLSAPGLSATVGDEIEALRRAAGDGAVRLIR
                     DEPNETIARIVEGWPRNFDARRALALGFRAESSMDEIVRVHIEDELGGRVGG"
     gene            complement(1510..2415)
                     /locus_tag="VHZ56_02710"
     CDS             complement(1510..2415)
                     /locus_tag="VHZ56_02710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017997155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEX4296907.1"
                     /translation="MTTHRFVPTVWYNTLGSHPPALTVESGDIVVTETIDANGFDKLD
                     RPVKDGPNPMNGPIAVAGAEPGDSLRVDIIAMTPIRPTGWTRAALAANVVDPGFVPNL
                     PPSDRVTWRIDRNAQTATLENAPPALAGRVFPLAPMIGCFGVAPALGQAISTATSAEH
                     GGNMDYRRFGPGSAAWFPVAAPGALFFLGDCHALQGDGEIVGTGIETCCEVTVRLTVE
                     KRTIVWPRGETARDIFTIGNARPLDQALQHATTEMVRWLGERGFDISAASHLLGQAVR
                     YDIGNVFDPAYTIACRLDKKWLQPA"
     gene            complement(2412..3038)
                     /locus_tag="VHZ56_02715"
     CDS             complement(2412..3038)
                     /locus_tag="VHZ56_02715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007633958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296908.1"
                     /translation="MRKPKSVRALEELGRVRLSENFFMRDFLYSEIANFYGIANIPDD
                     PDLAIAAGRKLCEDALEPLRERFGRISIRSAYRSPAVNRLGNERNLSCACNEANLGGH
                     IWDRHTAAGEVGATASIIVHALIPWYQRTGRWEAIAWWIHDHLPYDELEFFPKFAAFN
                     YGHGERQNRRIKSYIPPRRGILTKPGMANATGDHSAEYEGWLKGLETS"
     gene            3110..3469
                     /locus_tag="VHZ56_02720"
     CDS             3110..3469
                     /locus_tag="VHZ56_02720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014526819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4326 domain-containing protein"
                     /protein_id="HEX4296909.1"
                     /translation="MARPLRMHLSRHKGFNLQAESKKLNGLPAKRVTRPGRWGNPFTI
                     IDTAARYGLDDAAAQVKAVELCGQWLRGTLDKKLSPHDPPSHADIRAGLRGQNLACWC
                     KPGTPCHSEVLIEIANS"
     gene            complement(3466..4260)
                     /locus_tag="VHZ56_02725"
     CDS             complement(3466..4260)
                     /locus_tag="VHZ56_02725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007755896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEX4296910.1"
                     /translation="MQTGYGDAALKHRIPVIDRMMEVLSQLERRDNGLTIRDLVTQLH
                     LPRTTIYRILNTLQMHDMVHRDDGGAYQLGHRLLGLAAHVATGASEIDLVAMAQPHLD
                     RLGAEIGEGVKLSVLDRNGVLVLAAAQGRREYALTVAPGQRMEAHAGAASKLLLSYLP
                     EAELLPWLARPLVAFTPRTLTDPRRLKTELARIRRLGWSQDRGETAPSIHAFAAPVFD
                     TRDQVIAALSVPFLAGTEPSRMEEIRLATIATAKALSSEIPGPVAR"
     gene            4395..5090
                     /locus_tag="VHZ56_02730"
     CDS             4395..5090
                     /locus_tag="VHZ56_02730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007813092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HEX4296911.1"
                     /translation="MNHVELKLADTAERLKKLYAAAVYDIMDEMGLPNQCLDLSIKPL
                     ERSMRIAGPAFTIACAADARVDWEYDNDEVKRFTFFRRMYQGCVVVVSSGGENRAGHW
                     GELMSMSSQARGAAGVIIDGGIRDGNILMGMENWPVFTRYLSPIESKGRTRIRAIEEP
                     IAVAGSLSSQVRINPGDWLFGDMDGVVVMPAKIVDEVLRKAEEMGGIEDRAREEIRNG
                     ADVTTVFEKYGRL"
BASE COUNT          840 a         1648 c         1848 g          847 t
ORIGIN      
        1 tcggcggcga atcttgctgc gacgctgcgc agctggtccg cctcggccaa ggacccgacg
       61 ccgctcagcg aggccgcgga cctcttgcag cagtcgatcg aactgacgcc gcgcgaccag
      121 gccgccgccg actgggccga gctcgaaagc aagctcggca atgtgtgggg cgacatgttc
      181 ggtttcgacg gcaagcccga gaccgccgac aaggcggttg cggcctacca ggcggcggaa
      241 gaggtgacga ccgccgacgc caacctcgat gcgtgggcgg ggctggagct ggacatcctc
      301 gacgtgcagt tgcgggccgg cacgccgacg cacgacatcg cgcggatgaa gctcgcccgc
      361 gacacggcgg cgaccgcggc aagcatcctc aaggcgcgtg ggaacagcca ggcgagttat
      421 ttcgaaccgg tcgttccggc cctcgaccag tacatcgcgg cgttcgccaa gtagcttgcg
      481 cgcccggcat tggcgagtaa ggtccgcgcg acctcgggag gacgatttgc atattctggt
      541 cattggtgcc gccggcatga tcggccgcaa gctgacacag gccctggtgg cgaccggaaa
      601 ggtcggcgac cggccgatcg agcggttgac cctggccgac attgtcgggc ccgaggcgcc
      661 gcgtttcgat ggcgcggtcg aaacggtcgc gaccgatctc agtgcgccag gtgcggcggc
      721 ggcgatcatc gcccggcgtc cggacctgat ttttcatctt gccgcgatcg tttcgggcga
      781 ggccgaggcc gacttcgaga agggttaccg catcaacctc gatggcaccc ggcagctgct
      841 cgaggcgatc cggctcgaag gcgccaagtc gccctatcgg ccgcggctgg tgttcacctc
      901 ttcgatcgcg gtattcggcg cgccgttccc cgatgccatc ggggacgagt tcttctcgac
      961 gccactcacc agctacggca cgcagaaggc catctgcgag ctgctgctca atgactattc
     1021 gcgcaagggc ttcgtcgacg gcgtcggcat ccgcttcccg accatcgcgg tgcggccggg
     1081 ccggcccaac ctcgcggcct cgggcttctt ctccaacatc ctgcgcgagc ctctcagcgg
     1141 caaggaagcc gtcctgccgg tgagccgcga ggtgcggcac tggtttgcca gcccgcgggc
     1201 cgccatcggt ttcctgctgc atgcggcaag cctcgataca gcacagctcg gctggcgtcg
     1261 gacgctttcg gcaccggggc tcagcgccac agtgggcgac gagatcgaag cgctgcgccg
     1321 cgccgcggga gacggggcgg tgcgcttgat ccgcgacgag ccgaacgaga ccatcgcgcg
     1381 catcgtcgag ggctggccgc gcaatttcga cgctaggcgc gcgctggctc tcggcttcag
     1441 ggccgagtcg tcgatggacg aaatcgtccg ggtccacatc gaggacgaac tcggcggccg
     1501 ggtcggcggc taggccggct gcagccattt cttgtcgagg cggcaggcga tcgtataggc
     1561 gggatcgaag acgttgccga tgtcgtagcg caccgcctgg cccagcaaat ggcttgcggc
     1621 cgagatgtcg aagccgcgct cgccgagcca gcggaccatc tcggttgtcg cgtgctgcag
     1681 ggcctggtcg agcggccggg cattgccgat ggtgaagatg tcgcgcgccg tctcgccgcg
     1741 cggccagacg atggtgcgtt tttccaccgt cagccgcacc gtcacctcgc agcaggtctc
     1801 gatgccggtg ccgacgattt cgccgtcgcc ctgcagggcg tggcagtcgc cgagaaagaa
     1861 cagggcgccc ggggcagcga cggggaacca cgccgcggag cccgggccga agcggcggta
     1921 gtccatgttg cccccgtgct cggcgctggt cgcggtcgag atggcctggc cgagcgccgg
     1981 cgccacgccg aagcaaccga tcatcggcgc cagcgggaac acccgtccgg ccagcgccgg
     2041 cggggcattc tcgagcgtcg ccgtctgggc gttgcggtcg atgcgccagg tgacgcggtc
     2101 gctcggcggc aggttgggga cgaagccggg gtcgacgaca ttggcggcga gggcggcgcg
     2161 ggtccagccg gtcggccgga tcggcgtcat cgcgatgata tccacccgga ggctgtcgcc
     2221 gggttcggca cccgctacag cgatcgggcc gttcatcggg ttcgggccat ccttcaccgg
     2281 ccggtcgagc ttgtcgaagc cgttggcgtc gatcgtctcg gtgacgacga tgtcgccgct
     2341 ctcgacggtc agcgccggcg ggtggctgcc gagcgtgttg taccagacag tcggcacgaa
     2401 acgatgcgtg gtcatgacgt ctccaggcct ttgagccagc cttcatactc cgccgagtgg
     2461 tcgcctgtcg cgttggccat gccgggtttg gtcaggatgc cgcgacgcgg cgggatgtag
     2521 ctcttgatgc ggcggttctg gcgctcgcca tggccgtagt tgaaggcggc gaatttcggg
     2581 aagaactcga gctcgtcgta gggcaggtgg tcgtggatcc accaggcgat ggcctcccag
     2641 cggccggtgc gctggtacca ggggatcagc gcgtgaacga tgatcgaggc ggtggcgccc
     2701 acttcgcccg cggcggtgtg gcgatcccag atgtggcctc caaggttggc ctcgttgcac
     2761 gcacaactga gattgcgttc gttgccgagc cggttgacgg cggggctgcg gtaggcggag
     2821 cggatggaga tgcggccgaa gcgctcgcgc agcggctcca gcgcatcctc gcagagcttg
     2881 cggccggcgg cgatcgcgag gtcaggatcg tcgggaatgt tggcgatgcc gtagaagttg
     2941 gcgatctcgg agtagaggaa atcgcgcatg aagaaattct cgctgaggcg gacgcggccc
     3001 agttcttcca gcgcccgcac ggatttcggt ttcctcatcc gggctttcct cttgatgcca
     3061 ggcgactaga atggcgccgc cggcacggcg agaaaacccg gaatcgacca tggccagacc
     3121 actgcgcatg cacctgtcgc gtcacaaggg cttcaatctg caggccgagt ccaaaaagct
     3181 caatggcctg ccagccaagc gggtgacgcg gccgggcaga tggggcaacc cgttcaccat
     3241 catcgacacg gcggcgaggt acggcctcga cgatgcagcg gcgcaggtca aggcggtcga
     3301 gctttgcggg cagtggctgc ggggtaccct cgacaagaag ctgtcgccgc acgatccgcc
     3361 gagccacgcc gacatccgcg ccgggctcag gggtcaaaat ctcgcctgct ggtgcaagcc
     3421 ggggacgccg tgccacagcg aagtgctgat cgagatcgcg aacagctagc gcgccacggg
     3481 cccggggatt tcgctgctga gcgccttggc cgtggcgatc gtcgccaggc ggatttcctc
     3541 catccggctc ggttcggtgc cggcgaggaa gggcacgctc agggccgcga tcacctggtc
     3601 gcgagtgtcg aacaccggcg cggcgaaagc gtggatcgac ggcgcggttt cgccgcggtc
     3661 ctgcgaccag ccgaggcggc ggatgcgggc gagttcggtc ttcagccgcc gcgggtcggt
     3721 gagggtgcgc ggcgtgaagg cgaccagcgg tcgggccagc cagggcagca gctcggcttc
     3781 gggcaggtag gacaacagca gcttgctggc ggcgccggca tgcgcttcca tgcgctgtcc
     3841 cggtgcgacg gtgagggcat attcgcgccg gccctgcgcc gcggccagca cgagaacacc
     3901 gttccggtcg agcacgctga gcttgacgcc ttcgccgatc tcggcgccca gccggtcgag
     3961 gtgcggctgt gccatggcca cgaggtcgat ctcgctggcg cccgtcgcca cgtgtgcggc
     4021 gagcccgagc agccggtgcc cgagctgata ggcgccgccg tcgtcgcgat gcaccatgtc
     4081 gtgcatctgc agggtgttga ggatgcggta gatggtggtg cgcggcaaat gcagctgggt
     4141 gacgaggtcg cggatggtca gcccgttgtc gcgccgttcg agctggctca gcacctccat
     4201 catgcggtcg atcaccggaa tgcggtgctt cagcgccgcg tccccatagc cagtctgcac
     4261 cgtcgaatcc ccatctgcga tgcccgttga ctccgggctg gaagcgcatt taacatcaat
     4321 tattgaacag gccaagttca aatatgaata gatcggcaaa cgatcactgg cctgtcggtg
     4381 gaggagaggg cgccatgaac cacgtcgagc tcaagctcgc cgatacggcg gaacggctga
     4441 agaagctcta cgccgcggca gtctacgaca tcatggacga aatgggcctg cccaatcagt
     4501 gcctcgatct gtcgatcaag ccgctggagc gctcgatgcg catcgccggg ccggccttca
     4561 ccatcgcctg cgccgccgat gcccgggtcg actgggaata cgacaacgac gaggtcaagc
     4621 gcttcacctt ctttcgccgc atgtaccagg ggtgcgtggt ggtggtgtcc tcgggcggag
     4681 agaaccgcgc cggccactgg ggcgagctga tgagcatgtc gtcgcaggcg cgcggcgcgg
     4741 ccggggtcat catcgacggc ggcattcgcg acggcaacat tctcatgggc atggagaact
     4801 ggccggtgtt cacccgctat ctcagcccga tcgagtcgaa gggccgcacc cgtatccggg
     4861 cgatcgagga gcctatcgcc gtcgccggtt cgctcagcag ccaggttcgc atcaatccgg
     4921 gagactggct gttcggcgac atggacgggg tggtggtgat gccggccaag atcgtcgacg
     4981 aggtgctgcg caaggccgag gagatgggcg gcatcgagga ccgggcgcgc gaggaaatcc
     5041 gcaacggcgc cgatgtcacc acggtgttcg agaaatacgg ccggttgtga tgcgaaagtc
     5101 tgcatgtcac cgccctcgcg tggccacgcg cgacatgatt tgatcggcgt cgaacggaga
     5161 cgcgtgcgcc gatggccagg att
//
LOCUS       DATAZA010000108         5878 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1517726, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000108 DATAZA010000000
VERSION     DATAZA010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5878
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1517726"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1602
                     /locus_tag="VHZ56_02735"
     CDS             <1..1602
                     /locus_tag="VHZ56_02735"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4296912.1"
                     /translation="AESYSANAAATEFTFKLRDGMKWSDGHPYTTEDVMFWYDDVFSN
                     KDIEVTDQDHLIVGDDKAVFTKIDDLSFKISFKNPNGLFLPLLAWADSDQTGRFPKHY
                     VSQFMPKYNPDADKNAIAAGFSGWVQMFQKKTGAALEDDFFTNSDIPVLHPWKMKVAP
                     GESTEHAIAERNPFYWKVDTAGNQLPYLDQIDYVLVSDAQVLLLKCLQGEIDLLDQYI
                     GTPTNKSVLFDGQKKGDYNFYTVTSTEPNEMAITLNMTHPDKVKAALYSQKDFRAALS
                     IAIDRQALIDSVFVSVGTPSQPAIVEGDPLYNEQLAKQYTEFDPDKANAMLDKILPTK
                     DSDGYRLDSSGRRVSIVFEQDQNREAMVDMMQLIMPMLKNVGIDGQLKLIDRSLWEVR
                     IRQNMDFDATTNRFGGGGGLAAALDPRYFVPYSDNAFYAMGWQIWYNDKTAPNAVEPP
                     QQVQDALKAYDAMKSTIDDAKRNEAFKQILQIAADQFYCIGIKIPNDGYGIRKNNFKN
                     VPDKMPNSFGYPTPAPSNPEQFYKA"
     gene            1671..3791
                     /locus_tag="VHZ56_02740"
     CDS             1671..3791
                     /locus_tag="VHZ56_02740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020487023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004565 - beta-galactosidase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase trimerization
                     domain-containing protein"
                     /protein_id="HEX4296913.1"
                     /translation="MTDADAVRQPGGLRSPTWYESATRWTQLTLVEDDPQSFDIDFWF
                     GVFDDTRSNAACLSAGGYVAYYHSKIPLQHVSRSIGNSDPFGALVAGARSRNMHVVAR
                     VDPHAVHADVAAAHPEWISRTADGALRRHWSYPEAYVTCAWGNYNREFMSGVIREIAH
                     DYDIDAIFANRWAGHGVCYCAHCSTDFKARTGYDLPRQRDPHDPVWQAWLGWSREVLT
                     ALVGHWNGVVAAERSHGRFIPNIGNSSLLDFALDEVKRYCPILFVDHQGRTGVVPVWS
                     AGRDGKRMRGVMGNRPIGLVTSTSIEEKWRWKDSVQSPEEIRMWMTDGMAHGLRPWFT
                     KFNGKVHDSRWLPPIVETFGLHAALESELAPLVPTAEIALLDPSTTLRTWHADDRENA
                     EGHELGFYHALIEARLPFDLLSDLVIDDAALDRYKLIAVANAAFLSLAQCDALTRYVE
                     RGGSLVTSFETSLYDEHGVRRSDFGLARLLGVHATGETEGPTKNTYIAVEAPEHPLAA
                     GFEGAQRIIGGTRRVPVELTSALADVPFRFIPHFPDLPMEEIYARAAADTPAAITRQL
                     PGGGRVVYFPWNIGEIFWEVMNLDHSILLENAVLWALGDRPRVEVEGFGIVDIATREG
                     PGKLSVHLVNLTNPMMMKGPIREAIPLAGQMVSVALPEGCSSARVRLLVSKLAAEVRI
                     GGGRVEAHLPPILTNEVVLIEFRD"
     gene            3793..4779
                     /locus_tag="VHZ56_02745"
     CDS             3793..4779
                     /locus_tag="VHZ56_02745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007753190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4296914.1"
                     /translation="MLVYIVKRLLYMIPTLFGMSLISFIIIQLPPGDFLTSLISALAD
                     SGQSLDQASIARLTALYGLDQPFYVQYWKWISAILFHGDFGWSFDWGQPVSRLLWDRM
                     GVTLLVSVLSLVLIWVIAIPIGIYSAVKRYSLGDYVFTFFGFIGLAIPTFILALGLMY
                     LSFTYFGQNVGGLFSPEYQSAPWSLGKFWDLCLHLWIPILVIAISSTAALIRVMRANL
                     SDELSKPYVVTARAKGLSEFTLIMRYPVRLALNPFISTIGWVLPSLISGVTITAIVLN
                     LPMAGPLLLRALVSQDMYLAGAFILVMSALTLVGMLISDILLALLDPRIRYQ"
     gene            4776..>5878
                     /locus_tag="VHZ56_02750"
     CDS             4776..>5878
                     /locus_tag="VHZ56_02750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016555747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4296915.1"
                     /translation="MTMEAIPSEDAALPADQPSLLVAAAGQGAAVAGEWRLMLWRFRR
                     HRLAVVSLGIVLLLYLIGIFAEFLAPYGPDTTRPQYTYAPPQGIEFLAQGADGSTSWN
                     FHAAGYDITVDQQAMRRTFLVNPAKVMPLGLFVHGEKYKLWGLISSDLHLIGPAKAGD
                     VVYLLGSDRLGRDVLSRLIYGTRVSMSIGLVGVAISVVLGVFLGGISGYFGGAIDTLI
                     QRLVEVVSAMPTIPLWMGLAAAIPLTWGPIEVYFTVTAIVSLLGWTSLAREVRGRFFA
                     LRNEDFVTAARLDGAGQMRIIFRHVLPSMTSHILAMVTLAVPAMIIAETSLSFLGIGL
                     KPPVVSWGVLLQDAQNLRAIASAPWLLLWPALAV"
BASE COUNT          998 a         1997 c         1842 g         1041 t
ORIGIN      
        1 gccgagtcct attcggccaa cgccgccgcc accgagttca ccttcaagct gcgcgacggc
       61 atgaagtggt ccgacggcca tccctacacc accgaagacg tgatgttctg gtacgacgac
      121 gtgttctcga acaaggacat cgaggtcacc gatcaggatc acctgatcgt cggcgacgac
      181 aaggcggtct tcaccaagat cgatgacctc agcttcaaga tcagcttcaa gaatccgaac
      241 ggcctcttcc tgcccctgct ggcctgggcc gacagcgacc agacgggccg cttccccaag
      301 cactacgtca gccagttcat gcccaagtac aatcctgacg ccgacaagaa cgccatcgcc
      361 gccgggttct ccggctgggt gcagatgttc cagaagaaaa ccggcgccgc gctcgaggac
      421 gatttcttca ccaactcgga catcccggtc ctccatccgt ggaagatgaa ggtggcgccc
      481 ggcgagagca ccgagcacgc gatcgccgaa agaaatccgt tctactggaa agtcgacacc
      541 gccggcaacc agctgcccta tctcgaccag atcgactacg tgctcgtctc cgacgcgcag
      601 gtgctgctgc tcaaatgcct gcagggcgag atcgacctgc tcgaccagta catcggcacg
      661 ccgaccaaca agtcggtgct gttcgacggc cagaagaagg gcgactacaa tttctacacc
      721 gtcacctcga ccgagcccaa cgagatggcc atcaccctca acatgaccca tcccgacaag
      781 gtcaaggcgg cgctgtattc gcagaaggat ttccgcgcgg cgctgtcgat cgccatcgac
      841 cggcaggcgc tgatcgactc ggtcttcgtc agcgtcggca cgccctcgca gccggcgatc
      901 gtcgagggcg atccgctcta caacgagcag ctggccaagc aatacaccga gttcgacccg
      961 gacaaggcca atgcgatgct cgacaagatc ctccccacca aggacagcga cggctaccgc
     1021 ctcgacagct cgggacgccg cgtcagcatc gtcttcgagc aggaccagaa ccgcgaggcg
     1081 atggtcgaca tgatgcagct catcatgccg atgctgaaga acgtcggcat cgacgggcag
     1141 ctcaagctga tcgaccgctc gctgtgggaa gtgcgcatcc ggcaaaacat ggacttcgac
     1201 gccacgacca accgcttcgg cggtggtggc ggcctcgccg ccgcgctcga tccgcgctac
     1261 ttcgtgccct atagcgacaa cgccttctac gcgatgggct ggcagatctg gtacaacgac
     1321 aagacggcgc cgaacgccgt cgagccgccg cagcaggtgc aggacgccct caaggcctac
     1381 gacgccatga agagcacgat cgacgacgcc aagcgcaacg aggcgttcaa gcagatcctg
     1441 cagatcgccg ccgaccagtt ctattgcatc ggcatcaaga tccccaacga cggctacggc
     1501 atccgcaaga acaatttcaa gaacgtgccg gacaagatgc cgaattcctt cggctatccg
     1561 acaccggcgc cgagcaaccc ggaacagttc tacaaagcct gaggtccagc ccgatggggg
     1621 agcccgtatg gctcccccag tcctcccgcc tggcccgatt ggattccacc atgactgatg
     1681 ctgatgccgt gaggcagccc ggcgggctgc gctcgccgac ctggtatgaa agcgcgacgc
     1741 gctggacgca gctgacgctc gtcgaggacg atccgcaaag cttcgacatc gacttctggt
     1801 tcggcgtctt cgacgacacc cggtcgaatg ccgcctgcct ttcagccggc ggctatgtcg
     1861 cctactacca cagcaaaatc cccctgcagc atgtgagccg gtcgatcggc aacagcgacc
     1921 cgttcggcgc gctggtggcc ggcgcccggt cccgcaacat gcacgtggtg gcgcgcgtcg
     1981 atccgcatgc cgtgcatgcc gatgtcgcgg cggcacatcc ggaatggatt tcgcggacgg
     2041 ccgatggcgc cctccgccgc cactggtcgt atcccgaagc ctacgtcacc tgcgcctggg
     2101 gcaattacaa ccgcgagttc atgagcgggg tgatccgcga gatcgcccac gactacgata
     2161 tcgatgcgat cttcgccaat cgctgggccg gccacggggt ctgctactgc gcccattgca
     2221 gcaccgattt caaggccagg accggctatg acctgccgcg ccagcgcgac ccgcacgatc
     2281 cggtctggca ggcgtggctg ggctggtcgc gcgaggtgct gacggcgctt gtcggccact
     2341 ggaacggcgt cgttgccgcg gagcggtcgc atggccgctt catccccaac atcggcaatt
     2401 cgtcgctgct cgacttcgcc ctcgacgagg tgaagcgcta ctgcccgatc ctgttcgtcg
     2461 atcaccaggg ccgtaccggc gtggtgccgg tctggtcggc gggacgcgac ggcaagcgca
     2521 tgcgcggcgt catgggcaac aggccgatcg gcctcgtcac gtcgacctcg atcgaggaga
     2581 aatggcgctg gaaggactcg gtgcagtcgc ccgaggaaat ccgcatgtgg atgaccgacg
     2641 gcatggcgca cgggctgcgg ccatggttca ccaagttcaa cggcaaggtg cacgacagcc
     2701 gctggttgcc gccgatcgtc gagaccttcg gactgcacgc cgcgctcgag agcgagctcg
     2761 cgccgctggt gccgacggcg gagatcgcgc tgctcgatcc ctcgacgacg ctgcgcacct
     2821 ggcacgccga cgaccgcgaa aatgccgagg gccacgagct cggtttctac cacgcgctga
     2881 tcgaggcgcg cctgccgttc gacctgctct cggacctcgt gatcgatgac gccgcgctcg
     2941 accgctacaa gctgatcgcg gtcgccaacg ccgccttcct gtcgctggcg cagtgcgatg
     3001 ccctgacgcg ctatgtcgaa cgcggcggca gcctcgtcac cagcttcgag acgtcgctct
     3061 acgacgagca cggggtgcgg cgcagcgatt tcggccttgc ccggctgttg ggcgtgcatg
     3121 cgaccggcga aaccgagggg ccgaccaaga acacctacat cgccgtcgag gccccggagc
     3181 acccgctggc ggcggggttc gagggtgcgc agcggatcat cggcggaacc cgccgggtgc
     3241 ccgtcgagct gacgagcgcg ctggcggacg tgccgttccg cttcattccg catttccccg
     3301 acctgccgat ggaggaaatc tacgcccgcg cggccgcgga caccccggcg gccatcaccc
     3361 ggcagctgcc cggcggcggc cgcgtcgtgt attttccgtg gaatatcggc gagatcttct
     3421 gggaggtgat gaacctcgac cattcgatcc tgctcgagaa tgcggtgctc tgggccctcg
     3481 gcgaccggcc gcgcgtcgag gtcgagggat ttggcattgt cgacatcgcc acccgcgaag
     3541 gaccggggaa gctctcggtt caccttgtca atctcaccaa tccgatgatg atgaagggac
     3601 cgatccgcga ggcgatcccg ctggcgggcc agatggtatc ggtggcgctg ccggaggggt
     3661 gcagcagcgc cagggtgcgg ctgctggtat cgaagctggc agccgaagtg cgcattggcg
     3721 gcgggcgcgt cgaagcgcat ctgccgccca tcctcaccaa cgaggtggtc ctgatcgagt
     3781 tccgcgactg aaatgctggt ctatatcgtc aagcggctgc tctacatgat cccgacgctg
     3841 ttcgggatgt cgctgatttc gttcatcatc atccagctgc cgccgggcga cttcctgacc
     3901 tcgctgatct cggccctcgc cgattccggc cagtcgctcg accaggcctc gatcgcccgg
     3961 ctgacggcgc tctacggtct cgaccagccg ttctacgtgc agtactggaa gtggatctcc
     4021 gccatcctgt tccacggcga tttcggctgg tcgttcgact ggggccagcc ggtgagccgg
     4081 ctgctctggg accgcatggg cgtgacgctg ctggtgtcgg tgctgagcct cgtcctcatc
     4141 tgggtcatcg ccatccccat cggcatctat tcggcggtga agcgctattc gctgggcgac
     4201 tacgtgttca cgttcttcgg cttcatcggg ctggcgatcc cgaccttcat cctggcgctc
     4261 gggctgatgt atctgagctt cacctatttc ggccagaacg tcggcggcct gttctcgccc
     4321 gaataccagt cggcgccatg gagcctcggc aagttctggg atctgtgcct gcatctgtgg
     4381 attccgatcc tcgtcatcgc catttcctcg acggcggcac tgatccgggt gatgcgggcc
     4441 aacctctccg acgagctcag caagccctac gtggtgacgg cgcgcgccaa gggcctgtcc
     4501 gagttcaccc tgatcatgcg ctacccggtg cggctggcgc tcaatccgtt catctcgacc
     4561 atcggctggg tgctgccgtc gctgatctcg ggcgtcacca tcaccgccat cgtgctcaac
     4621 ctgccgatgg ccggaccgct gctgctgcgc gcgctggtca gccaggacat gtatctcgcc
     4681 ggcgccttca tcctggtcat gagcgcgctg acgctggtgg gcatgctgat ttccgacatc
     4741 ctgctcgccc tgctcgatcc gcgcatccgg tatcaatgac catggaagcg atccccagcg
     4801 aagacgccgc gctgcccgcc gaccagccct cgctgctggt cgcagcagca gggcagggcg
     4861 cggcggtggc cggcgaatgg cggctgatgc tctggcgctt ccggcgccat cggctggcgg
     4921 tggtctcgct ggggatcgtc ctgctgctct acctcatcgg catcttcgcc gagttcctgg
     4981 cgccctacgg gccggacacc acgcgcccgc aatataccta cgcaccgccg cagggcatcg
     5041 agttcctggc gcagggcgcc gatggcagca cgtcgtggaa cttccacgcc gccggttacg
     5101 acatcacggt cgatcagcag gcgatgcgcc gcaccttcct ggtgaacccg gccaaggtga
     5161 tgccgctcgg gcttttcgtg cacggcgaga aatacaagct ctggggcctc atcagcagcg
     5221 acctgcactt gatcggaccg gcgaaggcgg gcgacgtagt ctatctgctg ggcagcgacc
     5281 ggctggggcg cgacgttctc agccggctga tctacggaac ccgcgtctcg atgtcgatcg
     5341 gtctcgtcgg cgtggcgatc tcggtggtgc tcggggtctt cctgggcggc atctcgggct
     5401 atttcggcgg cgccatcgac accctgatcc agcgcctggt cgaggtcgtg agcgccatgc
     5461 ccaccatccc gctgtggatg gggctcgcgg ccgccatccc gctgacctgg ggcccgatcg
     5521 aggtctattt cacggtgacg gcgatcgtct cgctccttgg ctggacgtcg ctggcgcgcg
     5581 aggtgcgcgg ccgcttcttc gcgctgcgca acgaggattt cgtcaccgcc gcgcggctcg
     5641 acggggcggg gcagatgcgg atcatcttcc ggcacgtgct gccatcgatg accagccaca
     5701 tccttgccat ggtgacgctg gcggtgccgg ccatgatcat cgccgagacc tcgctgtcgt
     5761 tcctcggcat cggcctcaag ccgccggtgg tcagctgggg cgtcctgctg caggacgcgc
     5821 agaacctgcg cgccatcgcc agcgcgccat ggctgctgct gtggccggcg ctggcagt
//
LOCUS       DATAZA010000109         2531 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2563007, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000109 DATAZA010000000
VERSION     DATAZA010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2531
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2563007"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(515..1705)
                     /locus_tag="VHZ56_02755"
     CDS             complement(515..1705)
                     /locus_tag="VHZ56_02755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015886711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HEX4296916.1"
                     /translation="MRPVLEVADVFRRHGDAFRRDRSPHLGRVERRVMAAIEACRTAA
                     LGGHVEQCGECGLSRPAYNSCRNRHCPKCQGLARAEWLEARQAELLPVPYFHVVFTLP
                     ALAAEIAFQNKRVVYAILFRAAADALREIAADTRHLGAEIGAVAVLHTWGQALQHHPH
                     LHCIVPGGGLSPDQSRWIACRPGFFLPVRVLSRRFRTLFLTRLQAAFAGGELRFSGAL
                     ADLAEPDCFAGRLGALRGMEWVVYSKRPFAGPEQVLGYLGRYTHRVAIANSRLTQLAD
                     GQVSFTWKDYRHHGKTKVMTLPADEFMRRFLLHTVPDGFHRIRHVGFLANSHRAAKLT
                     LCRALLAVPAPVPSPPQTYQDRYFELTGHSLDVCPDCGGAMRDRGPLLPRPPPRPAFW
                     CDTS"
     gene            complement(1715..2530)
                     /locus_tag="VHZ56_02760"
     CDS             complement(1715..2530)
                     /locus_tag="VHZ56_02760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006199609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEX4296917.1"
                     /translation="MVRNLSPATQRSYVHAVAKFGRFFGRSPERLGLEDVRTFQVHLV
                     AGGISWPALNQTVCALRFLYGVTLKQADLPERIPYARTHRKLPVVLSADEVVCFLEAV
                     PSLKARAALTTAYAGGLRASEACGIKVADIDSSRMVIRVEHGKGGRDRYVMLSPQLLN
                     ILRSYWRLARPERWLFPGRDGEHPISPTVLHAACRSACAAAGLSKRVTVHTLRHSFAT
                     HLLESGTDIRIIQALLGHSSLNTTARYTQVATSTIRATPSPLDRLQLEVTPPP"
BASE COUNT          462 a          769 c          908 g          392 t
ORIGIN      
        1 tcgtagatcg ccgctaatgc cagcaaacgg cgcgcctgcg ggccgtcttt ggttttcttc
       61 gcggcagcac gcacctgcgc cgcggtaaag tccattcgaa gcgggaccgg catggcaaac
      121 tccgaggttc gccatcttga atcacactaa agccgattcg ggaatctgga ggcttctgtg
      181 aggtcgcggg gcttggctcg cggttgcagc acgctcggtc gcgacctcat tgaagccgga
      241 ttgaactgaa ccgcgggccg agagggctat gggcgttgat gtcgccgcag ggtggggcat
      301 ggttgccagc gccggatctg atcggagccg tcatgctgga gcgagagcgc cgcacgcgtt
      361 gtcggccggg ttgcgggtcg aaacaccggt gagtggtggc cgctgtatag cggcacgagc
      421 gggacgttag tcacgatcag gacgtacgtt tctgatccga cgcggatatc ggtccaaacg
      481 gcgcgatgcg gacatggggc gaacacgatg gtgatcatga ggtgtcgcac cagaacgctg
      541 gtcgaggcgg cggccggggt agcagtgggc cgcgatcacg catcgctccg ccgcagtccg
      601 gacagacatc cagcgaatgg ccggtcagct cgaagtagcg gtcttggtag gtttgcggcg
      661 gagatggaac cggcgccggg actgcaagca gggcgcggca cagcgtgagc ttggcggcgc
      721 gatgactgtt ggccaggaac ccaacgtggc ggatgcgatg aaagccgtcg ggcacggtat
      781 gcagcagaaa ccgccgcata aactcgtcgg ctggcagcgt catcaccttg gtcttgccgt
      841 gatggcggta gtctttccag gtgaaactga cctggccgtc ggcgagctgg gtaaggcggc
      901 tgttggcgat ggcgacgcga tgggtgtagc ggccgaggta gccgagcacc tgttcggggc
      961 cggcgaatgg acgcttgctg tagacgaccc attccatgcc gcgcagagcg ccgaggcggc
     1021 cggcgaaaca gtcaggttcg gcgagatccg cgagcgcgcc agagaagcgt agttcgccgc
     1081 ctgcgaacgc agcttgcagc cgggtcagga acaacgtgcg gaaccgacgc gagaggacgc
     1141 gtacggggag gaaaaagcct ggccggcagg cgatccaccg gctctgatcg ggcgacaggc
     1201 cgccacccgg gacgatgcag tgcaggtgcg gatgatgctg cagcgcctgc ccccaagtgt
     1261 gcagaacggc aacagcgccg atctcggcgc cgaggtggcg cgtgtcggca gcgatctcac
     1321 gcaacgcgtc ggccgccgcg cggaagagga tggcgtagac gacgcgcttg ttctggaacg
     1381 cgatctccgc cgctagcgcc ggcagggtga acacgacgtg gaagtaaggc accggaagca
     1441 attcggcctg acgcgcctcg agccattcgg cgcgcgccaa cccctggcac ttaggacagt
     1501 gccggttgcg gcaggagttg tacgcggggc gagacaatcc gcactcgcca cactgctcga
     1561 catgcccgcc gagagcggcc gttcgacacg cctcgatcgc tgccatgaca cgccgctcga
     1621 cgcggcccaa atgcggactg cgatcgcgcc ggaatgcgtc gccgtggcgg cggaacacgt
     1681 ccgccacctc tagcacagga cgcatcgggc cgccttaagg cggcggggtc acctcaagct
     1741 gcagccgatc gagcggactc ggcgtggcgc ggatcgtgct ggtcgcgacc tgcgtgtagc
     1801 gcgccgtggt gttcaggctg ctgtggccga gcaaagcttg gatgatgcga atatcggtcc
     1861 cgctctccag cagatgggtg gcgaagctgt gccgcagcgt gtggaccgtc acccgcttgc
     1921 tcagcccggc ggcggcgcac gccgagcggc aagccgcgtg cagcacggtc ggactgatcg
     1981 ggtgctcgcc atctcggccg gggaagagcc agcgctctgg acgtgccagc cgccagtagg
     2041 aacgcaggat gttgagcaac tgcggagaga gcatcacgta gcggtcgcgt ccgcctttgc
     2101 cgtgctcaac gcggatcacc atgcggctgc tgtcgatgtc ggctaccttg atcccgcaag
     2161 cctcggacgc gcgtaacccg cccgcatacg ccgtggtgag cgcggcgcgc gctttcaggc
     2221 tcgggacggc ctccagaaag cagacaactt cgtcggcgct cagcaccacc ggcagcttgc
     2281 ggtgcgtgcg ggcatacggg atccgctccg gaaggtcggc ctgcttgagg gtgacgccat
     2341 acaggaaccg aagcgcgcag accgtctggt tcaatgccgg ccacgagatg ccgccggcga
     2401 cgagatggac ctggaaagtg cggacatcct ccaggccaag gcgctccggc gagcggccga
     2461 aaaaacggcc gaacttggcg acagcgtgca cgtaggatcg ttgtgtcgcc ggcgacaggt
     2521 tgcgaaccat c
//
LOCUS       DATAZA010000110         1745 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4072102, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000110 DATAZA010000000
VERSION     DATAZA010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4072102"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1015
                     /locus_tag="VHZ56_02765"
     CDS             <1..1015
                     /locus_tag="VHZ56_02765"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4296918.1"
                     /translation="FGFAINADPHHLPTLVEMGDHGPLTRAVLAGMQQSDYFDFRGQV
                     AGTAAGEDALRRGAANFVVVIPQNFERDVVRGRSPDILIAADASDPSAVGGAAAALPG
                     IVNSAVEQVLVGPLAPATGGAPPFSIELHREYNPEGKTSTNIVPGLLAIILSMTMIVI
                     TSVAIVKETERGTMELLISTPVKPLEVMLGKILPYIFVGYVQTAVFLAAASVVFHVPF
                     EGSWAAFFLGFNLFIVVNLALGFLISTAARNQMQAMQLSFFTILPSILLSGFMFPFAG
                     MPGWAQVLGTAVPATHFLRIIRAVMLKGGDVADVGAECGALVVILAVISVVAMLRYRQ
                     TLD"
     gene            complement(1026..>1745)
                     /locus_tag="VHZ56_02770"
     CDS             complement(1026..>1745)
                     /locus_tag="VHZ56_02770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006202740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAF domain-containing protein"
                     /protein_id="HEX4296919.1"
                     /translation="AVPDDYREEATRRNMNPRMLVEFVDGSKTMVEMCAIANATGLVP
                     DVPGMHGPKADRDQMVKVLIPKADGGILDHKGVVDFTVGKGVAPGVFVIVEAEHPRII
                     ERMDDLHVGKGPYYSFFRPYHLTSLEVPLTAARIMLYGKPDMVPLPEPAAEVCAVAKR
                     DLAVGERFDAIGETCYRSFILTIGDARDKLAVPVGLLEGGKVIAPVKKGELLTRRNAA
                     PDPTTRLYALRQRQDQMFGLS"
BASE COUNT          253 a          541 c          631 g          320 t
ORIGIN      
        1 gttcggcttt gcgatcaacg ccgatccgca tcatctgccg acactggtcg agatgggtga
       61 ccacgggccg ctgacccgcg ccgtgctcgc cggcatgcag caatcggact atttcgattt
      121 tcgcgggcag gtggcgggaa ctgcggcggg cgaagacgcg ctgcggcggg gcgccgccaa
      181 tttcgtcgtc gtcatcccgc agaatttcga gcgcgatgtg gtgcgcggcc gctcgcccga
      241 catcctcata gcggccgacg cctccgaccc gtcggcggtc ggcggggccg cggcggcgct
      301 gccgggcatc gtcaacagtg cggtcgagca ggtgctggtc ggtccgttgg caccggccac
      361 aggcggcgcc ccgccattct cgatcgagct gcaccgcgag tacaaccccg agggcaagac
      421 ctcgaccaat atcgtgccgg ggctgctggc gatcatcctc agcatgacga tgatcgtcat
      481 cacctcggtc gccatcgtca aggagaccga gcgcggcacg atggagctgc tgatctcgac
      541 gccggtcaaa ccgctcgaag tgatgctcgg caagatcctg ccctacatct tcgtgggcta
      601 cgtgcagacg gcggtgttcc tcgcggcggc gtcggtggtg ttccacgtgc cgttcgaggg
      661 cagctgggcg gcgttcttcc tcggcttcaa cctgttcatc gtggtcaatc tggcgctcgg
      721 gttcctgatt tcgacggcgg cgcgcaacca gatgcaggcg atgcaactga gcttcttcac
      781 catcctgccg tcgatcctgc tgtccggctt catgttcccg ttcgccggca tgccgggctg
      841 ggcgcaagtg ctgggcaccg cggtgccggc gacgcatttc ctgcgcatca tccgggcggt
      901 gatgctgaag ggcggcgacg tggcggatgt cggcgccgag tgcggggcgc tcgtcgtcat
      961 cctcgcggtg atctcggtgg tcgccatgct gcgctaccgg cagacgctgg attgaggcgg
     1021 gccggtcagc tcaggccgaa catctggtcc tggcgctggc gcagggcgta gaggcgcgtg
     1081 gtggggtcgg gcgcggcatt gcggcgggtg aggagctcgc cctttttcac gggggcgatg
     1141 accttgccgc cttcgagcag gccgacgggg accgcgagct tgtcgcgggc gtcgccgatg
     1201 gtgaggatga agctgcggta gcaggtttcg ccgatggcat cgaagcgctc gccgacggca
     1261 aggtcgcgct tggcgacggc gcacacctcg gctgccggct cgggcagcgg caccatgtcg
     1321 ggcttgccgt agagcatgat tctggcggcg gtgagcggga cctcgagcga ggtcaggtgg
     1381 tagggacgga agaagctgta gtaggggccc ttgccgacat gcaggtcgtc catgcgctcg
     1441 atgatgcgcg gatgctcggc ctcgacgatg acgaacacgc cgggcgcgac gcccttgccg
     1501 accgtgaagt cgacgacgcc cttgtggtcg aggatgccac catcagcttt ggggatcagc
     1561 accttgacca tctggtcgcg atcggccttc gggccgtgca tgccagggac gtcggggacg
     1621 aggccggtgg cgttggcgat ggcgcacatc tcgaccatgg tcttggagcc atcgacgaac
     1681 tcgacaagca tgcgcgggtt catgttccgg cgggtggctt cctcgcgata gtcgtcgggg
     1741 acggc
//
LOCUS       DATAZA010000111         2444 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3839897, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000111 DATAZA010000000
VERSION     DATAZA010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3839897"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..718
                     /locus_tag="VHZ56_02775"
     CDS             <1..718
                     /locus_tag="VHZ56_02775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate-cysteine ligase family protein"
                     /protein_id="HEX4296920.1"
                     /translation="NSPFVDGKPSGDLSFRARIWLDTDRARTGLLPFVFDDGFGFDRY
                     VEHALDVPMYFVIRDHRYIDASGQSFRAFLRGELPQLPGEKPTIKDWEDHLSTLFPEV
                     RLKQFLEMRGADMGDRDHVLALPALWVGLLYDSAALDAAWSLVRDWTAGERDALRDGV
                     PRTAIHTPFRRGTVADVARQMVDIARSGLEARGQGEEQYLAPLEQTLALGKTPAERWL
                     DKYHGEWGGDLTRIFDEAEI"
     gene            complement(723..1481)
                     /locus_tag="VHZ56_02780"
     CDS             complement(723..1481)
                     /locus_tag="VHZ56_02780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4296921.1"
                     /translation="MTFFRDTWIIFLRSMRLSLRQPLWVLIGLLQPILYLTLFGPLLQ
                     NIAASSGFQGDAWQVFVPGLLVQLGIFGGLFVGFGIIAEWRSGVIERQLVTPAMRTAI
                     VTGRTLRDVVVIVVQAAVLVGAAFLLGLRVPAGALAIGFVLVALLGAAFSFISNAIGI
                     ATKSEDALAPLVNTLALPILLLSGILLPMNIAPRWLQIVSDFNPFKHIVEALRAVFRG
                     DFSDPIVWIGLLLAVILVVLGAWLGNRTLSAQTR"
     gene            complement(1493..>2444)
                     /locus_tag="VHZ56_02785"
     CDS             complement(1493..>2444)
                     /locus_tag="VHZ56_02785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4296922.1"
                     /translation="TMIEAKGLKRTYKARGKSIEAVRGIDLRVEAGEIVGFLGPNGAG
                     KTTTLKMLCTLLAPTGGSATVAGSDLRADSVGVRRKIGYVSQAGSTSSEAVVGDEIIS
                     HAQLYGIDKKAARARGEELLAALDLSDVWSRTCGSLSGGQRRRLDIVMGLIHQPTLVF
                     LDEPSTGLDPQSRANLWTHIRQLRDKLGTTVFLTTHYMDEADSLSDRILIIDNGTIVA
                     EGTPAELKKRVSGDAITLTLRHEEDARKSAEIAGGLAGADKPGIEANVVRLHVPDGAR
                     ALPVLLADLTRAGIDAIGVDVNRPTLDDVFLTLTGRSLRD"
BASE COUNT          408 a          890 c          771 g          375 t
ORIGIN      
        1 caattccccc ttcgtcgacg gcaagccctc gggcgacctg agctttcgcg cccgcatctg
       61 gctcgacacc gaccgcgccc gtaccggcct gctgccgttc gtcttcgacg acggcttcgg
      121 cttcgaccgc tacgtcgagc atgccctcga cgtgccgatg tatttcgtca tccgcgacca
      181 ccgctacatc gatgcctccg gccagagctt ccgcgccttc ctgcgcggtg agctgccgca
      241 gcttccgggc gaaaagccga ccatcaagga ctgggaagac cacctctcga cgctgttccc
      301 cgaagtccgg ctgaagcagt ttctcgagat gcgcggcgcc gatatgggcg atcgcgatca
      361 cgtcctggcg cttccggcgc tctgggtcgg cctgctctac gacagcgccg cgctcgacgc
      421 cgcctggagc ctcgtccgcg actggactgc cggcgaacgc gacgccctgc gcgacggcgt
      481 cccgcgaacc gcgatccaca cgccgttccg ccgcggcacc gtcgccgacg tggcgcggca
      541 gatggtcgac atcgccagat ccggcctcga ggcgcgcggg cagggggagg aacagtacct
      601 cgccccgctc gagcagaccc tcgcgctcgg caagacgccc gccgagcgct ggctcgacaa
      661 atatcacggc gagtggggcg gcgacctgac ccgcatcttc gacgaggccg agatctagac
      721 gctcaccgcg tctgcgcgct gagcgtccgg ttgccgagcc aggcgccgag caccacgagg
      781 atcaccgcca gcagcagccc gatccagacg atgggatcgg agaaatcgcc gcgaaatacg
      841 gcgcgcagcg cttcgacgat gtgcttgaac gggttgaagt cggaaacgat ctgcagccag
      901 cgcggcgcga tgttcatcgg cagcaggatg cccgacagca agaggatcgg cagcgccagc
      961 gtgttgacca gcggcgccag cgcgtcttcg ctcttggtgg cgatgccgat ggcgttggaa
     1021 atgaacgaga acgccgcgcc cagcagcgcc accagcacga agccgatggc gagcgccccg
     1081 gccggcaccc gcagcccgag caggaacgcc gcgccgacca gcaccgccgc ctgcaccacg
     1141 atcaccacca cgtcgcgcag tgtccgcccg gtgacgatcg cggtgcgcat cgccggcgtc
     1201 accagctgcc gctcgatcac gccgcttcgc cattcggcga tgatcccgaa gccgacgaac
     1261 agcccgccga agatgcccag ctgcaccagc agccccggca cgaacacctg ccaggcatcc
     1321 ccctggaatc ccgagctcgc cgcgatgttc tgcagcagcg gcccgaacag tgtcagataa
     1381 aggatcggtt gcaacagccc gatcagcacc cacagcggct gcctgaggct cagccgcatc
     1441 gagcgcagga aaatgatcca cgtatcgcgg aagaaggtca ttccagttct cctcagtctc
     1501 tcaggcttcg tccggtcagc gtcaaaaaca catcgtcgag ggtcggccgg ttgacgtcca
     1561 cgccgatggc gtcgatcccc gcccgtgtca ggtccgccag caggacgggc agggcgcgcg
     1621 cgccatcggg aacgtgcagc cgcaccacat tggcttcgat ccccggcttg tcggcgcccg
     1681 cgagcccccc ggcgatctcc gccgatttgc gcgcgtcttc ctcgtgccgc agcgtcagcg
     1741 tgatggcgtc gccggagacg cgcttcttga gctcggccgg agtcccctcg gcgacgatcg
     1801 tgccattgtc gatgatgagg atgcggtcgg acagcgaatc tgcctcgtcc atgtagtgcg
     1861 tggtgagaaa caccgtggtc ccgagcttgt cgcgcagctg tcggatatgg gtccagaggt
     1921 tcgcccggct ctgcggatcg agcccggtcg agggctcgtc gaggaacacc agcgtcggct
     1981 gatggatgag ccccatgacg atgtcgagcc gccgccgctg cccacccgac agcgagccac
     2041 aggtgcgcga ccacacatcg ctcaggtcga gcgccgccag cagttcttca ccacgcgccc
     2101 gcgccgcctt cttgtcgatg ccgtagagct gcgcgtggct gatgatctcg tcgcccacca
     2161 cggcttccga tgaggtcgag ccggcctggc tgacatagcc gatcttgcgc cgcaccccga
     2221 ccgagtcggc ccgcaggtcg ctgccggcga ccgtggcgct gccgccggtc ggcgccagaa
     2281 gcgtgcaaag catcttcagc gtcgtcgtct tgccggcgcc gttcggcccg agaaagccga
     2341 cgatctcgcc cgcctcgacc cgcagatcga tgccgcgcac cgcctcgatc gacttgccgc
     2401 gggccttgta ggtccgcttg aggcccttgg cctcgatcat cgtc
//
LOCUS       DATAZA010000112         3104 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3375767, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000112 DATAZA010000000
VERSION     DATAZA010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3104
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3375767"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..937
                     /locus_tag="VHZ56_02790"
     CDS             <1..937
                     /locus_tag="VHZ56_02790"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002967888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HEX4296923.1"
                     /translation="EMFLWSALGARGVDMLAWESFGEGWVTDVAKQLKLKDVRTITAP
                     YGQLPDLKQVNFDNDVVFTWNGTTSGVRVPNADWIAADRKGLTICDATSGAFAQKLDF
                     SKLDVVTFSWQKALGGEAAHGILILSPRAVERLESYKPDRPLPKIFRLTKGGKLMEDI
                     FEGATINTVSMLCIEDAVDAMEWGKSIGGLKAMQARADANFKVLGDWVAKTDWIDFLA
                     QVPEQRSNTSVCLVIADPQVKALDEDARSAFAKAIVSRLDKAGVAYDIGHYRDAPTGF
                     RIWAGSTVEASDLKALTGWLDWAFATEKSALKVAA"
     gene            1093..2676
                     /gene="serA"
                     /locus_tag="VHZ56_02795"
     CDS             1093..2676
                     /gene="serA"
                     /locus_tag="VHZ56_02795"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004617 - phosphoglycerate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HEX4296924.1"
                     /translation="MPKVLVSDKLSKTAVQIFKDNGVEVDYLPDLGKDKDKLFEVIGQ
                     YDGLAIRSATKVTEKIISAAKNLKVIGRAGIGVDNVDIPAATKKGIIVMNTPFGNSIT
                     TAEHAIAMMFALARQLPEADASTKASKWEKNRFMGVEVTSKTLGIIGAGNIGSIVADR
                     AQGLRMKVVAFDPFLSPERAQAIGVEKVELDELLKRADFITLHTPLIDATRNIINADS
                     IARMKPGVRIINCARGGLVDEKALYDGLKSGKVAGAAFDVFVEEPAENNPLFELPNFI
                     ATPHLGASTTEAQENVALQVAEQISAYLMTGEITNALNFPSISAEEAPRLTPWVKLAE
                     ALGSFAGQLTDTSVKGIRIEYEGSVAELNVRPMTAAAVNGVLKPQMQEVNMVSAPQIA
                     KDRGINVEVITRDRQGAYEGYVRLTVITDKQERAIAGTIFANGRPRVIQVKGINMEAE
                     LTPSMLYVTNEDKPGHIGRLGTLLGNLGVNIANFNLGRADVGGDAIALLSIDGSVSDK
                     QLKEIGTLPGVRQARSLAF"
     gene            2702..>3104
                     /locus_tag="VHZ56_02800"
     CDS             2702..>3104
                     /locus_tag="VHZ56_02800"
                     /inference="COORDINATES: protein motif:HMM:NF016062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004671 - protein C-terminal
                     S-isoprenylcysteine carboxyl O-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006481 - C-terminal protein methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEX4296925.1"
                     /translation="MHLSAVRIAFAVLWGGWVISWLVAAIWASRAAQRPPFLQEIPYR
                     LLTTIGALLVALQFRRPGLGMIFWDPPAAIGWLLFLIAVAGIAVTWWARIYLGTLWSG
                     SVTRKADHRIVDTGPYGVVRHPIYTGILTAIY"
BASE COUNT          575 a          972 c         1043 g          514 t
ORIGIN      
        1 cgagatgttc ctgtggtcgg cgctcggcgc ccgcggcgtc gacatgctgg cctgggaatc
       61 gttcggcgaa ggctgggtga cggatgtcgc caagcagctg aagctcaagg acgtgcggac
      121 catcacggcg ccgtatgggc agctccccga tctcaagcag gtcaatttcg acaatgacgt
      181 ggtgttcacc tggaacggca cgacgtcggg cgtgcgcgtg ccgaacgccg actggatcgc
      241 ggccgaccgc aaggggctga cgatctgcga cgcaacctcg ggcgcctttg cgcaaaagct
      301 cgatttctcg aagctcgatg tggtgacctt ctcctggcag aaggcgctgg gcggggaggc
      361 tgcgcacggc atcctcatcc tctcgccgcg cgcggtcgag cggctcgaga gctacaagcc
      421 cgaccggccg ctgccgaaga tcttccgcct gaccaagggc ggaaagctga tggaggacat
      481 cttcgaaggg gccaccatca acaccgtatc gatgctgtgt atcgaggacg cggtggatgc
      541 gatggagtgg ggcaagtcga tcggcggcct caaggccatg caggcgcggg ccgacgcgaa
      601 cttcaaggtg ctcggcgact gggttgcaaa gaccgattgg atcgatttcc tcgcccaggt
      661 tccggagcag cgttccaata cgtcggtgtg cctcgtcatc gccgaccccc aggtcaaagc
      721 gctggacgaa gatgcgcgtt cggccttcgc caaggccatc gtctcccggc tcgacaaggc
      781 cggcgtcgcc tacgacatcg gccactatcg cgacgcgccc acgggctttc gcatctgggc
      841 cggctcgacg gtcgaggcgt ccgatctcaa ggcgctgacc ggctggctcg actgggcgtt
      901 cgccaccgag aagtcggcgc tgaaggtcgc cgcctgactc gccaacatca cggagtcatt
      961 cccgcgaaag cgggaatctc cgttaggccg attcacaaga agcagagatt cccgctttcg
     1021 cgggaatgac cccatcaaac tggttgccgg cgcggtgcac gcgaggcagc cgcggcaaac
     1081 aggaggggcg acatgcccaa ggttctcgtt tcggacaagc tcagcaagac cgcggtccag
     1141 atcttcaagg acaacggtgt cgaggtggac tacctgccgg acctcggcaa ggacaaggac
     1201 aagctgttcg aggtgatcgg ccagtacgat ggcctcgcca tccgctcggc caccaaggtc
     1261 accgagaaga tcatctcggc ggcgaagaac ctcaaggtca tcggccgcgc cggcatcggc
     1321 gtcgacaatg tcgacattcc cgcggcgacc aagaagggca tcatcgtgat gaacacgccc
     1381 ttcggcaatt caatcaccac cgccgagcat gcgattgcga tgatgttcgc gctcgctcgc
     1441 cagctgccgg aagcggatgc ctcgaccaag gccagcaagt gggagaagaa ccgcttcatg
     1501 ggggtcgagg tcaccagcaa gacgctgggc atcatcgggg cgggcaacat cggctcgatc
     1561 gtcgccgacc gggcgcaggg cctcaggatg aaggttgtcg cgttcgatcc gttcctgagc
     1621 ccggagcggg cgcaggcgat cggcgtcgag aaggtcgagc tcgacgaact gctgaagcgc
     1681 gccgatttca tcacgctgca cacgccgctg atcgacgcca cccgcaacat catcaatgcc
     1741 gactcgatcg ccaggatgaa gcccggggtg cggatcatca actgcgcgcg cggcgggctg
     1801 gtggacgaaa aagccctcta cgacgggctc aaatcgggca aggtcgcggg cgcggcgttc
     1861 gacgtgttcg tcgaggaacc ggccgagaac aatccgctgt tcgagctgcc gaacttcatc
     1921 gccacgccgc acctgggtgc ctcgaccacg gaagcgcagg agaatgtcgc gctgcaggtc
     1981 gccgagcaga tttcggcgta cctgatgacc ggggagatca ccaacgcgct caacttcccg
     2041 tcgatttccg ccgaggaagc tccgcggctg acgccgtggg tgaagctcgc cgaagcgctg
     2101 gggtcgttcg ccggacaatt gaccgacacc tcggtcaagg gcatccggat cgagtatgag
     2161 ggcagcgttg ccgagctcaa cgtcaggccg atgacggccg cggcggtgaa cggcgtgctg
     2221 aagccgcaga tgcaggaagt gaacatggtt tcggcgccgc agatcgccaa ggatcgcggc
     2281 atcaatgtcg aggtcatcac gcgcgaccgg cagggcgcgt acgagggcta cgtccggctg
     2341 accgtgatca ccgacaagca ggagcgggcg atcgccggca cgatctttgc gaacggcagg
     2401 ccgcgcgtca tccaggtcaa gggcatcaac atggaggcgg agctgacgcc gtccatgctg
     2461 tacgtgacga acgaggacaa gcccggccac atcggtcgcc tcggcacgct gctgggcaac
     2521 ctcggcgtca atatcgccaa cttcaacctc ggccgcgccg atgtcggggg cgacgccatc
     2581 gcgctactct cgatcgacgg ttcggtgagc gacaagcagc tgaaggagat cggcacactg
     2641 ccgggcgtgc gccaggccag gtcgctggcg ttctagtccg gcgcagcgct gggagatcac
     2701 gatgcatttg tcggccgtgc gcatcgcttt tgccgtgttg tggggcggct gggtcatctc
     2761 ctggctggtg gcggcgatct gggccagccg ggcggcgcag cgaccaccgt tcctgcagga
     2821 gattccctac cggctgctga ccaccatcgg cgcgctgctg gtggcgctgc agttccggcg
     2881 tcccgggctc gggatgatct tctgggaccc tccggccgcg attggctggc tgctgttcct
     2941 gatcgcggtg gcgggcatcg cggtcacctg gtgggcgcgg atctacctcg gcacgctgtg
     3001 gtcgggttcg gtcacgcgca aggccgacca ccgcattgtc gacacgggac cctatggggt
     3061 ggttcgccat ccgatctata ccggcattct gacggcgatc tatg
//
LOCUS       DATAZA010000113         3305 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_10470, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000113 DATAZA010000000
VERSION     DATAZA010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3305
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10470"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..698
                     /locus_tag="VHZ56_02805"
     CDS             <1..698
                     /locus_tag="VHZ56_02805"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="trypsin-like serine protease"
                     /protein_id="HEX4296926.1"
                     /translation="TPRVVPGPDNRTQITDSSAYPFGAIGWLWTQDQKGNWATCTATL
                     IGPKSIITAAHCVYDHDTGGWVKSMLFIPGATDAQTAPYGQYDWANVNILKGFIDNYD
                     GKNYGSVMPWDIAEVELQTDAGNQIGWMGFQVDDGSAWTATTAGYPGDKPDGTMWQTS
                     CDIPANTTQDPTVAHTCATYAGTSGSPMWAPDAKGDLYIRAINVAEDVQGKMNYGVRL
                     TDAYYQFLTDNYK"
     gene            complement(776..3055)
                     /locus_tag="VHZ56_02810"
     CDS             complement(776..3055)
                     /locus_tag="VHZ56_02810"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HEX4296927.1"
                     /translation="MLLAASPICFVGAMVTTEAHAENYALIAAASDYPNLLPKYWLKG
                     PKNDALLVRDYLLNNAPVKFEPQDVTTLSSGDGMQLATHQNILDSLDRIASEAKAGDF
                     VFLQFSGHGSQQPAVNDPDEPDGKDEVFLSADTEMAPADNPTFFPNVLTDNEMATKLA
                     AIRKTGAFVWVVFDSCYSGSMTRAPADPGMVERKIDPADLGIPDSAFPKPGATPTAAS
                     DDTSRALPLPTSVYSDDPDNTKQGGLVAFFAAQTTETAPETPFDVQQPDGTVIKQNYG
                     VFTHTIFTALANNPNLTYRQLAQTVLADYTADNWLKPTPVFQGRLDAPVFGSNDIKPT
                     EQWPVKVETDGTLSVAAGQIYGVAAGTKLLVLPSPAAPSDQAIGVVEVKSADELNAVV
                     IPSSDDKHPLIDASLIKPGTYVRVDAVQYPFELVVARPDPKTTDATQAKAVDDALDAI
                     VAAEDKPAADPAKPPLRLKVVDPDQAADLRLAVLSQTDAAKLTGATGVQATSLSEAPT
                     LWLLPASGEISLDPTREAPQMPLPTAASADTSADFAKALQDNLVKVFRATGLSRLTAA
                     NSFAPSDFKLVYSKEDAGSTTRETLAPEQTPVMRPGDRLFVDFTNNSGKTADVNVLYV
                     DHDYGITQVCKAKLAAGDHMLQPVADIDETDSGAERVVTVVNESDKNLTDLGFLAQPG
                     IIRSRGLGEPALLGMIDDLGAGEATRAAPVMRSASQTPRGAVVVMPLDIEAATGATAV
                     KKMGLADDPAWTGDCGNDS"
BASE COUNT          513 a         1107 c         1116 g          569 t
ORIGIN      
        1 ccacgccgcg cgtcgtcccg ggaccggaca accgcaccca gatcaccgat tccagcgcct
       61 atccctttgg cgccatcggc tggctgtgga cgcaggacca gaagggcaac tgggcgacct
      121 gcacggcgac cctcatcggc cccaagagca tcatcaccgc agcgcactgc gtctacgacc
      181 acgacaccgg cggctgggtg aaatcgatgc tgttcatccc cggcgcgacc gatgcccaga
      241 ccgcccccta cggccagtac gactgggcca acgtcaacat cctcaagggc ttcatcgaca
      301 actacgacgg caagaactac ggctcggtga tgccgtggga catcgccgag gtcgagctgc
      361 agaccgatgc gggcaaccag atcggctgga tgggcttcca ggtcgacgac ggctcggcgt
      421 ggacggcgac gaccgccgga tatcccggcg acaagccgga cggcacgatg tggcagacca
      481 gttgcgacat cccggccaac accacccagg acccgacggt cgcccatacc tgcgccacct
      541 acgccggcac gtcgggcagc ccgatgtggg cccccgacgc caagggcgat ctctacatcc
      601 gcgccatcaa cgtcgccgag gacgtgcagg gcaagatgaa ctacggcgtc cgcctgaccg
      661 acgcctacta ccagttcctg accgacaact ataagtagcc cagtcggcag ccgacgaaaa
      721 agccccgcgg cgcgtgccgc ggggctttgc tttcagccgc gtccgaccgt gcggctcagc
      781 tgtcgttgcc gcagtctccg gtccaggcgg gatcgtccgc gaggcccatc ttcttgaccg
      841 ccgtcgcccc ggtcgccgcc tcgatgtcga gcggcatcac caccacggcg ccgcgcggcg
      901 tctggctggc gctgcgcatc accggcgccg cccgcgtcgc ctcgccggct cccagatcgt
      961 cgatcatccc gagcagcgcc ggctcaccga ggccccgcga acggatgatc cccggctgcg
     1021 cgaggaaccc caggtcggtc aggttcttgt cgctctcatt gaccaccgtc accacgcgct
     1081 ccgcgcccga gtcggtctcg tcgatgtcgg cgaccggttg cagcatgtgg tcgccggcgg
     1141 caagcttggc cttgcacacc tgggtgatgc cgtagtcgtg gtcgacgtag agcacgttga
     1201 catcggcggt cttgcccgaa ttgttggtga agtcgacgaa cagccggtcg cccggccgca
     1261 tcaccggcgt ctgttcgggc gccagggttt cccgcgtcgt gctgccggca tcctctttgc
     1321 tgtagaccag cttgaagtcg ctgggcgcaa agctgttggc ggccgtcagt cgcgacaggc
     1381 cggtggcgcg gaagaccttc accagattgt cctgcagcgc cttggcgaag tcggcgctgg
     1441 tgtccgcact ggcggcggtc ggcagcggca tctgtggcgc ctcgcgggtc ggatcgagcg
     1501 agatctcgcc gctcgccggc agcagccaca acgtcggcgc ctcgctgagc gaggtggctt
     1561 gcactccggt ggcgccggtg agcttggcgg cgtcggtctg cgacagcacg gcgagccgca
     1621 ggtcggcggc ctggtcgggg tcgaccacct tgaggcgcag cggcggcttg gccggatcgg
     1681 ccgccggctt gtcctcggcc gcaacgattg cgtcgagcgc gtcgtccacg gccttggcct
     1741 gcgtcgcgtc ggtggtcttc ggatcgggtc gtgccacgac cagctcgaac ggatattgca
     1801 ccgcatccac gcggacatac gtccccggct tgatgaggct cgcatcgatc agcggatgct
     1861 tgtcgtcgga cgacggaatg acgaccgcgt tcagttcgtc ggcgctcttc acctcgacga
     1921 cgccgatcgc ctggtcgctg ggggcggcgg ggctcggcaa caccaggagc ttggtgccgg
     1981 cggcaacgcc gtagatctgg ccggcggcga cgctgagcgt gccgtcggtc tcgaccttga
     2041 ccggccattg ctcggtcggc ttgatgtcgt tgctgccgaa caccggcgcg tcgagccgcc
     2101 cctggaacac cggcgtcggc ttcagccagt tgtcggccgt gtagtcggcg agcaccgtct
     2161 gcgccagctg ccggtaggtg aggttggggt tgttggcgag ggcggtgaag atcgtgtgcg
     2221 tgaacacccc gtagttctgc ttgatgacgg tgccgtccgg ctgctgcacg tcgaacggcg
     2281 tttccggcgc cgtctcggtg gtctgcgcgg cgaagaacgc caccagccca ccctgcttgg
     2341 tgttgtcggg gtcgtctgaa tagaccgagg tcgggagcgg cagcgcccgg ctggtgtcgt
     2401 cgcttgctgc ggtgggcgtc gcgccgggct tggggaaggc gctgtcgggg atgcccaggt
     2461 cggccggatc gatcttgcgt tcgaccatgc cgggatcggc cggcgcccgc gtcatcgacc
     2521 ccgaatagca tgaatcgaac accacccaga cgaacgcccc ggtcttgcgg atcgcggcga
     2581 gcttggtcgc catctcgttg tcggtgagca cgttgggaaa gaacgtcggg ttgtctgccg
     2641 gcgccatctc ggtgtcggcc gacaggaaca cctcgtcctt gccatccggt tcgtccgggt
     2701 cgttgaccgc cggctgttgc gaaccatgcc cggaaaactg caggaagacg aaatcgccgg
     2761 ccttggcctc gctggcgatc ctgtcgaggc tgtcgaggat gttctggtgc gtcgccagct
     2821 gcatgccgtc gcccgagctg agcgtggtga cgtcctgcgg ctcgaacttc accggtgcgt
     2881 tgttgaggag gtagtcgcgc accaggaggg cgtcgttctt ggggcctttc agccagtact
     2941 tgggcagcag attcgggtaa tcgctggcgg cggcgatcag cgcgtagttc tccgcgtgcg
     3001 cctcggtcgt gaccatcgcc ccgacaaagc agatcggcga cgcagccagc agcaaggcga
     3061 gcgatcggga cagtccacga tgagcaggca tttgcgaaat tcccccaaaa gacatggtga
     3121 tactgctggt tagacgcagg gactatgacc ggccggcggc ggaacacaag cggcggcaag
     3181 gcgtttgacg ggcatttacc agccgcgccg ggaacctgcc tgctcctctt gcgggcactt
     3241 gcccggccgc aatagtgtcc ccccacttca gccggaggta gatcgatgcc gagcccgatg
     3301 atccc
//
LOCUS       DATAZA010000114         3737 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_822705, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000114 DATAZA010000000
VERSION     DATAZA010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3737
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_822705"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(154..3135)
                     /locus_tag="VHZ56_02815"
     CDS             complement(154..3135)
                     /locus_tag="VHZ56_02815"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding and (Fe-S)-binding domain-containing
                     protein"
                     /protein_id="HEX4296928.1"
                     /translation="MTRSLDISHKPGGDRQTKIAPSGRIEAVWAGPLRTDYDRLGAEI
                     EGAISGEVRFDAGSRALYATDASNYRQVPIGVVVPRSKDEVVKTIELCRKYSAPIVLR
                     GGGTSLAGQGCNVAVLIDMSKYMHEIVSLDYAARRAIVQPGCVLDHLRGAAEKQHLTF
                     GPDPATHDHNTLGGMLGNNSCGVHSIMSGRTSDNTESLEILTYDGLRMRVGPTSDAEY
                     RAILAAGGRKAEIYRALDDFRTRYRELILAKYPKIPRRVSGYENLEQLLPENGFNVAR
                     ALVGTEATCVTILEAELQLIPSPPERSIAIVGFEDVFAAADAVPDVLKFGPIACEGVD
                     DLLVEFVLKKHLHADDLSVLPDGKGWLIVEFGADTEDEAAGKAQKLIDAYKPSAKGTA
                     LLRDREQQKRIWEVRDAALGATAHVPGFPETYPGWEDSAVHRDNLGDYLRDLKTLFHK
                     YDYEASVYGHFGDGLVHCRVPFGLTTETGVESWRRFMDEAADLVVHYDGSLSGEHGDG
                     QARAELLDKMYGAELVRAFVEFKTIWDPEGRMNPGKIVDPYPITSNLRAGPSHQPDEI
                     DTYFAFKDDGGSFARATRRCVGVGSCRRRDSDKGVMCPSYMATNEEKHSTRGRARLLF
                     EMLYEGPIDNPWHSSEVEEALDLCLSCKGCKSDCPVNTDMATYKAEFRAHYYKGRLRP
                     PAAYSMGLIRDWSRFASHVPGLANFALQSPGLSRVIKKLAGVAEQRRMPRYADQTFVR
                     WFRSRDRRHDVRLDRTVMLFPDTFNNYFRPETAIAATRVLEQLGYTVTIPDKPVCCGR
                     PLYDWGMLDKARRLWTQTIDTLTPAIRLGIPIVGLEPACVSAFRDELPGLMGGNERAA
                     RLSGQMVFFTEFLDHKCPEAALPQVTGTGLVQMHCHHHAVIKTTSEEAVLKRLGLDYE
                     IMKSGCCGMAGSFGFEADKYEVSMTAAERVLLPRLRQAPLETIVLANGFSCREQIEQG
                     LPRKTQHIAELIASQLPSLKS"
     gene            complement(3153..>3737)
                     /locus_tag="VHZ56_02820"
     CDS             complement(3153..>3737)
                     /locus_tag="VHZ56_02820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEX4296929.1"
                     /translation="PDQDLARVEAARQAIGGAGLFVDANGAYDRKQALDFAHSFADLG
                     VSWFEEPVSSDDLAGLKLLRDRAPPGMEIAAGEYGYDPFYYRRMLEAGAVDVLQADAT
                     RCGGYTGFLKAATLADAWSVPLSAHTAPALHLPVCCAAPRLRHIEWFHDHARIEAMLF
                     DGAPMPADGTIAPDLDRPGHGLTFRHKEAERFAL"
BASE COUNT          639 a         1160 c         1251 g          687 t
ORIGIN      
        1 cgcaaggcac ttgtgctgcc gccgccgctc ggactgcccg caccctgacg cctgccgcca
       61 ggcagcattc acccggacgg cgaccgtcag tgggcggccg cacgccttcg cctcgtcact
      121 tggcggtctt gaagacgctc aatgcccgct cattcaggac ttaagggacg gaagttggct
      181 ggcgatcagt tcggcgatgt gctgcgtctt gcggggcagg ccctgttcga tctgctcgcg
      241 gcagctgaag ccgttggcga gcacgatggt ttcaagaggc gcctggcgga gcctcggcag
      301 caggacgcgc tctgcggctg tcattgagac ctcgtatttg tccgcctcga agccgaagga
      361 gccagccatg ccgcagcagc cggacttcat tatctcgtag tcgaggccga gccgcttcag
      421 caccgcctcc tccgaagtgg tcttgatcac cgcgtgatgg tggcaatgca tctgcacgag
      481 gcccgtgccg gtcacctgcg gcagtgcagc ctcgggacac ttgtggtcga ggaattcggt
      541 gaagaacacc atctgcccgc tgaggcgcgc ggcgcgctcg ttaccaccca tcagtccggg
      601 cagttcatcg cggaaggcgc tgacgcaggc cggctcgagc ccgacaatgg gaatgccgag
      661 gcggatcgcg ggggtcaggg tgtcgatggt ctgggtccac aggcgccgcg ccttgtcgag
      721 catgccccag tcgtaaagcg ggcggccgca gcaaaccggc ttgtcgggga tagtcacggt
      781 gtaaccaagc tgttccagaa cgcgggtcgc ggcgatggcg gtctcaggcc ggaaataatt
      841 gttgaaggtg tcgggaaaca gcatcaccgt acgatcgagc ctgacgtcgt ggcggcggtc
      901 gcggctcctg aaccagcgca caaaggtctg atcggcgtag cgtggcatgc gccgctgttc
      961 ggcgacgccc gcaagcttct tgatgactct cgagagacct ggcgactgca gcgcaaagtt
     1021 ggcgaggccc ggcacgtggc tggcgaaacg cgaccagtcc cggatgagcc ccatggaata
     1081 ggccgcgggc ggccggaggc gacccttgta gtaatgcgcg cggaactccg ccttgtaggt
     1141 ggccatgtcg gtgttgacag ggcagtcgct cttgcagccc ttgcaggaga gacagagatc
     1201 gagcgcctct tccacttcgg agctgtgcca gggattgtcg ataggcccct cgtacaacat
     1261 ttcgaacagc agccgggcac ggccgcgggt cgagtgcttt tcctcattgg tagccatgta
     1321 gctggggcac atgacgccct tgtcgctgtc tcggcggcgg caggagccaa cgccgacgca
     1381 tcgacgggtc gctcgcgcaa agctgcctcc atcatccttg aaggcgaaat aggtgtcgat
     1441 ctcgtccggc tgatgagagg gccctgccct caaattcgaa gtgatgggat agggatcgac
     1501 gatcttgccc gggttcatgc gaccttccgg atcccagatc gtcttgaact cgacgaaggc
     1561 gcggaccagc tcggccccgt acatcttgtc gagaagctcg gcgcgcgcct gcccgtcgcc
     1621 atgctcgccc gacagcgatc catcatagtg gacgacgagg tcagcagcct cgtccatgaa
     1681 ccgccgccag ctttcgacgc ccgtttcggt tgtgaggccg aacggcaccc ggcagtgcac
     1741 cagtccgtcg ccgaaatggc catatacgga tgcctcgtag tcgtatttat ggaacagcgt
     1801 cttaaggtcg cgcaaatagt caccgagatt gtcgcggtgg acggcgctat cctcccagcc
     1861 gggataggtc tcaggaaatc cgggaacatg ggcggtggca ccgagcgcgg catcgcgcac
     1921 ctcccagatc cgcttctgct gctcgcggtc gcgcagcaaa gccgtgccct tggcactggg
     1981 cttgtaggcg tcaatcagct tctgtgcttt gccggcagct tcgtcttccg tgtcggcgcc
     2041 gaactcgacg atcagccagc ccttgccatc gggcagtacg ctgaggtcgt cggcatgcag
     2101 gtgctttttc agcacgaact cgaccagcag gtcatcgacg ccctcgcagg cgatgggtcc
     2161 gaatttcaaa acgtccggca ccgcgtcggc ggcagcgaag acatcttcga atccgacaat
     2221 agcgatcgat cgttctggcg ggctcggaat cagctggagc tccgcttcga ggattgtcac
     2281 gcaggtggcc tcggttccca ccagggcccg cgccacgttg aagccgttct ccggcaagag
     2341 ctgctcgaga ttttcgtagc cggaaacgcg acggggaatc ttgggatatt tggcgaggat
     2401 gagctcgcgg tagcgcgtgc ggaagtcgtc cagcgcccgg tagatttccg ccttgcgtcc
     2461 gcctgcggcg aggatcgccc gatactcagc gtcgctggtc gggccgacgc gcatcctgag
     2521 gccgtcatag gtcaggattt cgaggctctc ggtgttatcc gaagtgcggc cgctcatgat
     2581 cgaatggacg ccgcaggagt tgttgccgag catgccgccc agcgtattgt ggtcatgcgt
     2641 ggccggatcg ggaccgaagg tgaggtgctg cttttccgcc gcgccacgta ggtgatcgag
     2701 cacgcaaccg ggctgcacga tggcgcgccg ggccgcgtag tcgagtgaaa cgatctcgtg
     2761 catgtatttc gacatgtcga tgagtacggc gacattgcag ccctgtcccg cgaggctggt
     2821 gccgccgccg cgcagcacga tcggggcgct gtatttgcgg cagagctcga tggtcttgac
     2881 gacctcgtcc ttggaacgcg gcacgaccac gccgatgggc acttggcgat agttcgaggc
     2941 gtcggtggcg tagagggcgc ggctgccggc gtcgaagcgg acttcaccgc taatcgcgcc
     3001 ttcgatctcg gcgccaagcc ggtcgtagtc ggtgcggagc gggccggccc agacggcctc
     3061 gatgcgcccg ctcggggcga ttttcgtctg ccgatcgccg ccgggcttat gggaaatgtc
     3121 gagcgaacgg gtcatgggtc gcctcgcttc gcctagaggg cgaagcgctc tgcctcctta
     3181 tgtctgaagg taagcccatg cccggggcgg tcgagatcgg gagcgatggt cccatcggcg
     3241 ggcatgggcg cgccgtcgaa cagcatggct tcaatgcgcg cgtggtcgtg gaaccattca
     3301 atgtggcgca gccttggcgc cgcgcagcag accggtaggt gcagggccgg ggccgtgtgg
     3361 gccgagagcg gaaccgacca ggcatcggcg agcgtcgccg ctttgagaaa gccggtgtat
     3421 ccgccgcatc gagttgcgtc ggcctgcagc acatcgacag cgcccgcctc gagcatccgt
     3481 ctgtagtaga aaggatcata accgtattcg cccgctgcaa tctccatgcc cggcggcgct
     3541 cggtcacgga gcagctttag tcccgcgagg tcgtcgctcg agaccggctc ctcgaaccag
     3601 ctcaccccca ggtcagcgaa gctgtgggcg aagtcgagcg cctgcttgcg atcgtaggcg
     3661 ccgttggcgt ccacaaacag gccggcgccg ccgatggcct gccgcgcggc ctcgacacgg
     3721 gcaagatcct ggtcggg
//
LOCUS       DATAZA010000115         3859 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2215126, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000115 DATAZA010000000
VERSION     DATAZA010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3859
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2215126"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..478
                     /locus_tag="VHZ56_02825"
     CDS             <1..478
                     /locus_tag="VHZ56_02825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018012486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4296930.1"
                     /translation="LPEGATYCSLCSRLRRGHLYRIAREEGCSALVLGHHREDSLETF
                     FMNLFHGGKLAAMPPKLLNDDGDVEVLRPLIYCAEDDLAKFAAQMRFPIIPCDLCGSQ
                     EGLQRNAMKAMLDDIERRMPGRKDVMIRALGNVSASHLLDPELFDFMGIAPGGPAR"
     gene            475..1296
                     /locus_tag="VHZ56_02830"
     CDS             475..1296
                     /locus_tag="VHZ56_02830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012557813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEX4296931.1"
                     /translation="MTRVDVLELAGILREAAKAEILPRFRRLDPNTVRTKTSATDLVT
                     EADTEAERAIKLEIARRWPDAVVIGEESVAADPALLHRIGGADLAITVDPVDGTANFA
                     AGLPLYAVMASVVANGEVVAGIIYDPMGDDWVLAERGGGAWLRRPDGAAERLKVAEPV
                     PLEQTIAHVSIGFLDPRYKVRVLGNLAKLAISANYRVAGHDYRTMASGHCHTVLFNKL
                     MPWDHLPGTLICAEAGAYVRKFDGSEYRPTDLDGGLLLAPDRDSWSLLRREVFTL"
     gene            1325..2044
                     /locus_tag="VHZ56_02835"
     CDS             1325..2044
                     /locus_tag="VHZ56_02835"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX4296932.1"
                     /translation="MELDDYWTIAESDIEIQNPVTDRKLRLLDDYCDIRDGLKVLDIG
                     CGKAWVMRQWADRFSIEGTGLDTNGAFLDVARRRPPTRGKLSFVHGQADRFVAEPGSY
                     DVVLCLGAAAALGGFVEAVDWMVAAARPGGAVVIGDLTVRHRPHVSSYEHLPLDPVDG
                     VAIIDRHGAEVSALISASDADYERYVSHHRHSALRWAREHPQHPDAEDVLEKSREDWG
                     YYLRTIRPYLGWTVFVARKSD"
     gene            complement(2045..3295)
                     /locus_tag="VHZ56_02840"
     CDS             complement(2045..3295)
                     /locus_tag="VHZ56_02840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HEX4296933.1"
                     /translation="MTDQSLAARALSRPEFIALVAGLMALNSLAIDVMLPALPAMGQA
                     LGVATDNDRQLVISAYMIGFGVAQLAFGPITDRFGRRAPLFAGIILYVLSAFLATFAP
                     SFALLLLLRLFQGFGAAATRVIAMSVIRDRFSGREMASVMSLAFMVFMVLPIVAPGIG
                     QLILFVGTWHEIFLFMAGLATIIGIWVYFRLPETLHPEYRRPLKLAVITEGFRLVFTN
                     RAALFYGLSGMFFFSGMFGFIICTQQIFVGIYGLGTLFPVAFAFVAGLMAISNFVNSR
                     IVKQYGQRRVSHFALLVYIGSAVVMLALALLGPVPFWAYFALLCLLQFVFAWATSNMN
                     SLSMEPLGQVAGTAAAVFGFLQTVGGAVIGTFIGQLFNGTLVPNSAAYVVMGLLVLGC
                     VLIAENGRLFGIGKEYQATPAMAE"
     gene            complement(3420..3755)
                     /gene="grxD"
                     /locus_tag="VHZ56_02845"
     CDS             complement(3420..3755)
                     /gene="grxD"
                     /locus_tag="VHZ56_02845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018902196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HEX4296934.1"
                     /translation="MSDINVFIDDKVKSNDVFLFMKGTPDFPMCGFSGRVVQILDYLG
                     VDYQSANVLENQELREGIKAYANWPTIPQLYIKGEFVGGADIITEMFQAGELQSHLVD
                     KGIAVKQPA"
BASE COUNT          711 a         1266 c         1287 g          595 t
ORIGIN      
        1 gctgccggaa ggcgcgactt attgctcgct ctgctcgcgg ctgcggcgcg gccacctcta
       61 tcgcatcgcg cgcgaggagg gctgctcggc gctggtgctg ggccaccatc gcgaggacag
      121 cctcgagacc ttcttcatga acctcttcca cggcggcaag ctggccgcca tgccgccaaa
      181 gctgctcaac gacgacggcg acgtggaagt gctgcggccg ctgatctact gcgccgagga
      241 cgacctcgcg aaattcgcgg cgcagatgcg ctttccgatc atcccctgcg acctctgcgg
      301 ttcgcaggaa ggcctgcagc gcaacgccat gaaggccatg ctcgacgaca tcgagcgccg
      361 catgcccggc cgcaaggacg tgatgatccg cgcccttggc aatgtcagcg ccagccatct
      421 gctcgaccca gaactgttcg atttcatggg catcgcaccg ggtggcccgg cacgatgacg
      481 cgggtcgatg tgctggagct ggcggggatc ctgcgcgagg ccgccaaggc agagatcctg
      541 ccgcgctttc gccgcctcga tccgaacacg gtccgcacca agaccagcgc gaccgacctg
      601 gtgacggagg ccgacaccga ggccgagcgc gcgatcaagc tcgaaatcgc aagacgctgg
      661 cccgacgcgg tggtgatcgg cgaagagtcc gtcgccgccg acccggccct gctgcatcgc
      721 atcggcggcg ccgacctggc gattacggtc gatccggtcg acggcacggc gaacttcgcg
      781 gctggattac cgctctacgc ggtgatggca tccgtggtgg ccaacggcga ggtggtcgcc
      841 ggcatcatct acgatccgat gggcgacgac tgggttctgg ccgagcgcgg cggcggcgcc
      901 tggctgcgcc gcccggacgg cgctgccgaa cggctgaagg tggccgagcc ggtcccgctc
      961 gagcagacca tcgcgcatgt ttcgatcgga tttctcgacc cgcgatacaa ggtccgggtg
     1021 ctgggcaatc tggcaaagct ggcaatttcg gcgaattatc gcgtcgccgg gcacgactac
     1081 cgcaccatgg cgtccggaca ttgccacacc gtgctgttca acaagctgat gccctgggac
     1141 cacctgccgg gcacgctcat ctgcgccgaa gcgggcgcct acgtccgcaa gttcgacggg
     1201 tccgagtacc ggccgacgga cctcgacggc ggcctgctgc tggcgcccga ccgcgactcg
     1261 tggagccttc tgcgccgcga ggtcttcacg ctatagtcgg gttagtcgcg ccggggaggt
     1321 tgccatggag ctcgacgact actggaccat cgccgaatcg gacatcgaaa tccagaaccc
     1381 ggtgaccgac cggaagctgc gtctgctgga cgattattgc gacatccgcg atggcctgaa
     1441 ggtgctcgac atcggctgcg gcaaggcctg ggtgatgcgc cagtgggccg accggttcag
     1501 catcgaaggc accggcctcg acacgaacgg cgccttcctc gatgtggcgc ggcgccggcc
     1561 gccgacccgc ggcaaattga gtttcgtcca cggccaggcc gatcgcttcg ttgccgagcc
     1621 cggcagctac gacgtcgtgc tctgcctcgg tgcggcggcg gcgctgggtg gcttcgtcga
     1681 ggccgtcgac tggatggtcg cggcggcgcg gcccggcggc gccgtggtga tcggcgattt
     1741 gacggtcagg caccgcccgc atgtgagctc ctacgagcac ctgccgctcg acccggtcga
     1801 cggcgtcgcc atcatcgacc ggcacggcgc tgaggtctcg gcgctgatct cggcctccga
     1861 cgccgactac gagcgctacg tcagccatca ccggcattcg gcgctgcgct gggcccgcga
     1921 gcatccccag caccctgacg ccgaggacgt gctcgaaaag agccgggagg actgggggta
     1981 ctacctgcgg accatccggc cctacctcgg ctggacggtg ttcgtggcgc gcaagagcga
     2041 ctgactattc ggccatcgcc ggcgttgcct ggtactcctt gccgatcccg aacaaccggc
     2101 cgttttcggc gatgaggacg cagcccagca ccagcaggcc catcaccaca taggcggccg
     2161 agttgggcac cagcgtgccg ttgaacagct gcccgatgaa ggtgccgatg acggcgcccc
     2221 ccactgtctg caggaacccg aacaccgccg cggcagtccc ggcgacctgg cccagcggct
     2281 ccatgctgag cgaattcatg ttcgacgtcg cccaggcgaa gacgaactgc agcaggcaga
     2341 gcagcgcgaa atacgcccag aacggcaccg gtccgagaag cgccagcgcc agcatgacca
     2401 ccgccgagcc gatgtagacc agcagcgcga aatggctgac ccggcgctgc ccgtactgct
     2461 tgacgatgcg cgagttgacg aagttggaga tcgccatcag cccggcgacg aacgcgaacg
     2521 ccaccgggaa cagcgtgccc agcccgtaga tgccgacgaa gatctgctgc gtgcagatga
     2581 tgaagccgaa cattcccgaa aagaagaaca tgccgctgag gccgtagaac agcgcggcgc
     2641 gattggtgaa caccagccgg aagccctcgg tgatgacggc aagcttgagc ggccgccggt
     2701 attccggatg cagcgtctcg ggcaggcgga aatacaccca gatgccgatg atcgtggcga
     2761 gccccgccat gaacaggaag atctcgtgcc aggtgccgac gaacaggatc aattgcccga
     2821 tgcccggagc gacgatcggc agcaccatga acaccatgaa cgccagcgac atcaccgagg
     2881 ccatctcgcg ccccgagaag cggtcgcgga tcaccgacat ggcgatgacc cgggtggcgg
     2941 cggcgccgaa tccctggaac agccgcagca gcaggagcag cgcaaagctc ggcgcaaacg
     3001 tcgcgaggaa cgcgctcagc acgtagagga tgatccccgc gaacagcggc gcccgccggc
     3061 cgaaccggtc ggtgatcggc ccgaacgcca gttgggcgac gccgaacccg atcatgtagg
     3121 cggaaatcac cagctgccgg tcgttgtcgg tggcaacgcc cagcgcctgc cccatcgccg
     3181 gcagggccgg cagcatgaca tcgatggcca gtgagttgag ggccatcagc cccgccacga
     3241 gagcaatgaa ttccggccgg gacagggccc gtgccgcgag agactggtct gtcatttgtg
     3301 atccgggagc cgggggaggt ggctcggagc cccgaggatt gatccgcggg gccagggaat
     3361 caaggcaact acgctgctaa ggctacggaa atgtcaccgg ccgcagccgg ccggagacgt
     3421 caggccggct gtttgaccgc gatgcccttg tcgacgaggt gcgactgcaa ttcgccggcc
     3481 tggaacatct cggtgatgat gtcggcgccg ccgacgaact cgcccttgat gtagagctgc
     3541 ggaatggtcg gccagttggc gtaggccttg atcccttcgc gcaattcctg gttctcgagc
     3601 acgttggcgc tctggtagtc gacgccgagg taatcgagaa tctgcaccac gcggccggaa
     3661 aagccgcaca tcgggaaatc cggcgtgcct ttcatgaaca ggaacacgtc gttggacttc
     3721 accttgtcgt cgatgaaaac gttgatgtcg ctcatggctg gcctttctgt ccgggggagg
     3781 gaccggagat ttcctgacta gataagccga gtttgcgacg ctgtcgaggc attcatcggg
     3841 atgtgacgat ggaacgcgg
//
LOCUS       DATAZA010000116         5390 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2215142, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000116 DATAZA010000000
VERSION     DATAZA010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5390
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2215142"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..375
                     /locus_tag="VHZ56_02850"
     CDS             <1..375
                     /locus_tag="VHZ56_02850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002967251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX4296935.1"
                     /translation="PLLGLAQAGAGGFFDAAGFPSGEGWDEVRLPGPGENGIYALEVT
                     GDSMLPLYRDGDRIVVSPTEQVRRGDRVVVKTREGEVMAKILARQTANVVELHSLNPA
                     HPPRLLDMKDIDWIARIIWASQ"
     gene            complement(395..2026)
                     /locus_tag="VHZ56_02855"
     CDS             complement(395..2026)
                     /locus_tag="VHZ56_02855"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEX4296936.1"
                     /translation="MTAPLPRLDPQFFDAAQAARAWPFEEARKLVERLKRTSQKDVLF
                     ETGYGPSGLPHIGTFGEVARTTMVRTAFRLLTRDEVPTRLIAFSDDMDGFRKVPANIP
                     NQEMMAGFLGKPLTRVPDPFGSPEGSFGAANNARLRAFLDGFGFSYEFASSTDYYTSG
                     RFDAALMRMLECYDEVMAIMLPSLGEERRETYSVFLPISEVSGNVLQVAVLEHDARAG
                     TIVYVDPADGQKHQTLVTGGRVKCQWKPDWALRWFALGVDYEMAGKDLIDSVKLASRI
                     VAVLGGSAPEGFNYELFLDENDQKISKSKGNGLTIDEWLAYGSPESLGQYMFHKPRAA
                     KKLYFGVVPKAVDDYYAFVAAYQGQTTAERLENPAFHVHFGHPPAAATPIGFSLLLNI
                     VSASNAESTDVLWGFISRYVDGATPKTHPELDKLAGYAVRYFNDRVKPTKTFRAPTEK
                     ERVALQDLSDRLAAFEGSTDAEALQNLVYEVGKAHAFEPLRDWFGAIYQVLLGADQGP
                     RFGSFIALYGVAETRRLIADALAGKLLKAPGLSPT"
     gene            2159..2563
                     /locus_tag="VHZ56_02860"
     CDS             2159..2563
                     /locus_tag="VHZ56_02860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015338732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HEX4296937.1"
                     /translation="MPLSTQDALIHLMVVAATSDSRVSDRELEAIGSATSLPVFEGFD
                     RQRLGAVAAEAIDLIKDSSSLDKVLDLILGAIPGRLHDTAYALAVEIAAVDLRLEQEE
                     LRLLEMIRDKLDLDGLVAAAIEASARARLRRA"
     gene            complement(2570..3379)
                     /locus_tag="VHZ56_02865"
     CDS             complement(2570..3379)
                     /locus_tag="VHZ56_02865"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX4296938.1"
                     /translation="MRAVFALIFLCFGVSLALAQTMPYHADPSARELVPNLSAVPNIR
                     FLTTADFPPFNYRDKSGELVGYNVDLARAVCADLSITCTIQAWPWEQAGKALQDGQGD
                     ALIAGLAMTPDNGALFDFTNIYLMFPGRFVTLKASATGFDPAQLAGKTVSVRKGSAHE
                     EFVHRYLPKATVAEFDTEIAALEAVRDKKADAYFGDAERASFWFNDNPDCCAFAGEPY
                     FRPDLFGEGMAVAVAPGHDAVRQAIDYSLGRLKKSGKLDELYLRWFPVGFY"
     gene            3535..>5390
                     /locus_tag="VHZ56_02870"
     CDS             3535..>5390
                     /locus_tag="VHZ56_02870"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX4296939.1"
                     /translation="MSHSVEAIALLRAVLRENCSTDIAARKHLNEAERLGVDPLDYCA
                     HRFGIGNETAWRRAAQWAGVPFAATTPSRLFAPAIDHLERLAGVRTLRQSVLGEEIVF
                     VAPGFASALSFRNASPAARRRVRFVPPDAIEAGLARAASAQLMDEARQQTTRLWPRAS
                     AAQDLPRSARIGFVCVLLGLIVLVMTAGLVARPWLVPVVALLLLAPGVIRILATPPAR
                     PARGVPLLGDPDLPLYTVLIPLRDEAAMVPMLHRAMAAIDYPPEKLDIKFVVEEGSVA
                     TVEAVRGVLEDPRFRLVVVPPGRPQTKPKALDYALPLARGRYLVVYDAEDVPDPGQLR
                     LAASHFAADAGVACLQAELVPENASENALTALFAGEYAGLFGRLLPALARWRLPVPLG
                     GTSNHFRIDALRALGGWDAFNVTEDADLGVRLARRGMRARMFASRTLEEAPLGYRAWL
                     AQRTRWMKGWMQTFIVHNRAPLQFLRDAGWRGFLGFQVLVGGMILTSLLHTFFIASLL
                     LRLGLEGVVGLVPKDLWDWLSVAILVSGYGGAFAIQVSGLIHQRAYHLLPIQLLLPAY
                     WFLHSFAALRAAWELVDRPDYWAKTRHGVTRLKRAAGPEPATAATELARVAA"
BASE COUNT          823 a         1736 c         1941 g          890 t
ORIGIN      
        1 ccgctgctcg gcctcgcgca ggccggcgcc ggcggcttct tcgacgcggc ggggtttccc
       61 tcgggcgaag gctgggacga agtgcggctg cccggtccgg gcgagaacgg catctacgcg
      121 ctcgaggtca ccggcgattc catgctgccg ctgtatcgcg atggcgaccg catcgtggtg
      181 tcgccgaccg aacaggtgcg gcgcggcgac cgcgtggtgg tgaagacccg cgagggcgag
      241 gtgatggcca agatcctggc gcggcagacc gccaatgtgg tggaactgca ttcgctcaac
      301 ccggcccatc cccccaggct gctcgacatg aaggacatcg actggatcgc gcggatcatc
      361 tgggcgagcc agtgaggaag gtgccccgcc gccctcaggt gggagacagg ccgggggcct
      421 tcagcagctt gcccgcgagg gcatcggcga tcaggcggcg ggtctcagcg acgccgtaga
      481 gggcgatgaa ggaaccgaaa cgcggcccct ggtcggcgcc gagcagcacc tggtagatgg
      541 cgccgaacca gtcgcgcagc ggctcgaagg catgcgcctt gccgacttcg tagacgaggt
      601 tctgcagcgc ctcggcatcg gtcgagcctt caaaggcggc gagccggtcg ctcagatcct
      661 gcagcgccac gcgttccttc tcggtcggcg cgcggaaggt cttggtcggc ttcacgcgat
      721 cgttgaagta gcgcacggcg tagccggcga gcttgtcgag ctcggggtgg gtcttcggcg
      781 tcgcgccgtc gacgtaccgc gaaatgaagc cccacagcac gtcggtgctc tcggcgttgc
      841 tggccgacac gatgttgagc agcaggctga agccgatcgg cgtcgcggcc gccggcggat
      901 gaccgaaatg cacatggaaa gcggggttct cgagccgctc ggcggtggtc tggccctggt
      961 aggcggcgac gaacgcgtaa tagtcgtcca ccgccttggg cacgacgccg aaatacagct
     1021 tcttggcggc gcgcggcttg tggaacatgt actggccgag gctctcaggc gagccgtagg
     1081 ccagccactc gtcgatggtg agcccgttgc ccttcgactt cgagatcttc tggtcgttct
     1141 cgtcgaggaa gagctcgtag ttgaagccct cgggtgccga tccgccaagc accgcgacga
     1201 tgcggctcgc gagcttgacg ctgtcgatca gatccttgcc agccatttcg tagtcgacgc
     1261 cgagggcaaa ccagcgcagc gcccagtcgg gcttccactg gcacttgacg cggccgccgg
     1321 tgaccagggt ctggtgcttc tggccgtcgg cgggatcgac gtagacgatg gttccagccc
     1381 tggcatcgtg ctcgagcacg gccacctgca agacgttgcc gctgacctcg gagatcggca
     1441 ggaagaccga ataggtttcg cggcgttcct cgccgagcga aggcagcatg atcgccatca
     1501 cctcgtcgta gcattcgagc atgcgcatga gcgcggcgtc gaaccggccg gaggtgtagt
     1561 agtcggtgga cgaggcgaat tcgtagctga agccgaagcc gtcgaggaag gcgcgcagcc
     1621 gcgcattatt ggcggcaccg aaggagcctt ccggactgcc gaatggatcg gggacgcggg
     1681 tcagcggctt gccgaggaag ccggccatca tctcctggtt ggggatgttt gcgggcacct
     1741 tgcggaagcc gtccatgtcg tcggagaagg cgatgagccg ggtcggtact tcgtcgcggg
     1801 tcagcagacg gaacgccgtc cgcaccatgg tggtgcgcgc gacctcgccg aaggtgccga
     1861 tgtgcggcaa cccggacggg ccgtacccgg tttcgaacaa cacatccttc tggctggtgc
     1921 gcttcagtct ctcgacgagc ttgcgggctt cctcgaatgg ccaggcccgg gcggcctggg
     1981 cggcgtcgaa aaactgcgga tcgaggcgcg gaagcggggc ggtcacggaa atctggcctt
     2041 tggggtaagg gacccggtgt tgccccagcg ggcggcgaaa agtcaatggc cgcggctgga
     2101 caaggcggag agcgctccct aggtatgcgg gacttttcgc agccgcagag gacctgtcat
     2161 gccgctttcg acccaggatg cgctgatcca cctgatggtg gtcgccgcga cgtcggattc
     2221 gcgggtcagc gaccgcgagc tcgaggcgat cggcagcgcg accagcctgc cggtgttcga
     2281 gggcttcgac cggcagcggc tgggcgccgt cgcggccgaa gcgatcgacc tcatcaagga
     2341 cagttccagc ctcgacaagg tgctcgacct catcctcgga gcgatcccgg ggcggctgca
     2401 cgacaccgcc tatgcgctgg cggtcgagat cgcggcggtc gacctccggc tcgagcagga
     2461 ggagttgcgg ctcctcgaaa tgatccgcga caagctcgat ctcgacgggc tggtggcggc
     2521 ggccatcgag gcatcggcgc gggcccggct gcggcgcgcc tgaccggctt cagtagaagc
     2581 cgacggggaa ccagcgcaga tagagctcgt cgagcttgcc ggatttcttg agccgcccga
     2641 ggctgtagtc gatggcctgc cgcacggcgt catggcccgg cgccaccgcg acggccatac
     2701 cctcgccgaa caggtctgga cggaaatacg gctcgccggc aaaggcgcag cagtccgggt
     2761 tgtcgttgaa ccagaagctc gcacgctcgg catcgccgaa ataggcgtcg gccttcttgt
     2821 cgcgcaccgc ctcgagcgcg gcgatttcgg tgtcgaattc ggcgacggtc gccttgggca
     2881 gatagcgatg cacgaactct tcgtgcgccg agcccttgcg gacggagacg gtcttgccgg
     2941 cgagctgcgc cgggtcgaag ccggtggcgc tcgccttgag ggtcacgaag cggcccggga
     3001 acatcaggta gatgttggtg aagtcgaaca atgcgccatt gtcgggcgtc atcgccagcc
     3061 cggcgatcag cgcgtcgccc tgcccgtcct gcagcgcctt gcccgcctgc tcccagggcc
     3121 aggcctggat ggtgcaggtg atcgacaggt cggcgcagac agcgcgggcg aggtcgacgt
     3181 tgtagcccac cagctcgccg gatttgtcgc ggtagttgaa gggcgggaag tcggccgtgg
     3241 tgaggaagcg gatgttgggc acggcgctca gattgggcac cagttcccgg gcgctcggat
     3301 cggcgtggta gggcatggtc tgggccagcg ccagcgacac gccgaagcac aaaaatatca
     3361 gggcgaagac ggcgcgcatc ggggtccgca acagatccgg tccgagctta tggcgcaatt
     3421 cagcgccgct ggcgaggcat tgcgggcctc ttgcaaagtc gcgctccgcc gtagcactat
     3481 acggcttatt acttatgcat atttcaacga cgtccgtaac gcttgggggc ggcggtgtct
     3541 cactcagttg aagccattgc tctactgcgc gccgtgctgc gcgaaaactg cagcaccgat
     3601 atcgcggcac gcaagcattt gaacgaggcg gagcggctcg gggtcgaccc gctcgactat
     3661 tgcgcgcacc ggttcgggat cggcaacgag acggcgtggc ggcgcgcggc gcagtgggcc
     3721 ggcgtgccgt ttgccgccac gaccccttcg cggctgttcg cgccggcgat cgatcacctc
     3781 gaacggctgg ctggcgtgcg cacgttgcgt caatcggtgc tgggcgaaga gatcgtgttt
     3841 gtcgcgccgg ggttcgcgag cgcgctgtcg tttcgcaacg ccagcccggc ggccaggcga
     3901 cgggtgcggt tcgtgccgcc cgacgccatc gaagctggcc tcgcgcgggc ggccagcgcc
     3961 cagctgatgg acgaggcgcg gcagcagacg acacggctct ggccacgggc gagcgccgcg
     4021 caggacctgc cgcgctcggc gaggatcggc tttgtctgcg tgctgctcgg gctcatcgtc
     4081 ctggtgatga cggctggact cgtggcgcgc ccgtggctgg tgccggtggt ggcgctgctg
     4141 ctgctggcgc ccggcgtgat ccgcatcctc gcgacacccc cggctcggcc ggcgcggggg
     4201 gtgccgctgc tcggcgatcc ggacttgccg ctttacaccg tactgatccc gctgcgcgac
     4261 gaggccgcga tggtgccgat gctgcaccgc gccatggcgg cgatcgacta tccgccggaa
     4321 aagctcgaca tcaaattcgt ggtcgaggag ggcagcgtgg cgaccgtcga agccgttcgt
     4381 ggcgtactcg aggatccgcg cttccggctg gtggtagtgc cgccgggccg gccgcagacc
     4441 aagcccaagg ccctcgacta cgcgctgccg ctggcgcgcg gccgatacct cgtggtctat
     4501 gacgccgaag acgtccccga tccgggccag ctgcgactgg cggcgagcca tttcgccgcc
     4561 gatgccggtg tcgcctgcct gcaggcggag ctggtgcccg agaacgccag cgagaacgcc
     4621 ctcacggcgc tgttcgcagg cgaatatgcg gggctgttcg gccggctgct gccggcactg
     4681 gcgcgctggc gcctgccagt gccgctgggc ggcacgagca accatttccg catcgacgcg
     4741 ctgcgggcgc tgggtgggtg ggacgcgttc aacgtcaccg aagatgccga cctcggggta
     4801 cggctggcgc ggcgcggcat gcgcgcccgg atgttcgcga gccgcacgct cgaggaggcg
     4861 ccgctcggct accgcgcctg gctggcgcag cgcacgcgct ggatgaaggg ctggatgcag
     4921 accttcatcg tccacaaccg cgcgccgctg cagttcctcc gcgacgcggg ctggcgcggc
     4981 tttctcggct tccaggtgct ggtgggcggg atgatcctca cctcgctcct ccacaccttc
     5041 ttcatcgcct cgctgctgct gcggctcggg ctcgagggcg tcgtcgggct ggtgcccaag
     5101 gacctgtggg actggctcag cgtggccatc ctcgtctccg gctatggcgg cgcgttcgcc
     5161 atccaggtca gcgggctcat tcaccagcgg gcctatcatt tgctgccgat ccagctgctg
     5221 ctgccggcct actggttcct gcactccttc gctgcgctgc gggcggcctg ggagctggtc
     5281 gaccggcccg actactgggc caagacccgg cacggggtga cgcggctgaa gcgtgccgcc
     5341 ggcccggagc cggcgacggc ggcaaccgag ctagcccgcg tagcggccga
//
LOCUS       DATAZA010000117         3337 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_706603, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000117 DATAZA010000000
VERSION     DATAZA010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3337
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_706603"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            51..126
                     /locus_tag="VHZ56_02875"
     tRNA            51..126
                     /locus_tag="VHZ56_02875"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:84..86,aa:Ala,seq:cgc)
     gene            complement(332..2521)
                     /locus_tag="VHZ56_02880"
     CDS             complement(332..2521)
                     /locus_tag="VHZ56_02880"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF017076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX4296940.1"
                     /translation="MLLGLLTVALLAWLRLADPYPVRALRDIGFDVFEQFAPRPASAA
                     PVRIVDIDEASLAKIGQWPWPRDVLARLTQRLTELGAASIAFDVLFPEPDRLSPAALA
                     QSLAADATVTPLHGDLPDYDTDFAAALAGAPAVLGFGTLPRPTALPARAKAGFAIVGD
                     GPIAAAPPFAGIVQSLPVLVNAAKGSGSIALDPTGSVGTVRRLPLLWSAGGQLYPALS
                     LEALRIALGQQSVIVFGDQTGQGTISAIRVGDFSIPTNSDGSIWLYYERPPASLYVSA
                     ADILSDGYKSKADLISGQIVLIGTSASGLQDIRGTPLGYDVPGVEVHAQALQQIVDHR
                     FLSRADWVNGLEVLAFVLIGAAIVVITLLSGPWVCLAVGAFLASIVAGLSWFGFAQAS
                     VLIDPTFPLLGSLIVYSAMIFFQYGIADADKRMIRRAFGHYVAPALLEQIEKRRHSLK
                     LGGETRELSILFLDIRNFTSISETVEPAHLLTILTTLFTRLGASITANSGTIDKFIGD
                     AIMAFWNAPLDVDRHPYRSCMAALEMRGALAQLNAEGAFGLGDGIGGPISTIAVGIGI
                     STGPALVGNFGLETQFNYSCVGDTVNVASRVEGACKAIAYDIAVSASTQVASAGLAFL
                     DAGHMELKGKQEREHVFILVGDEHLARSEAFQTLQKAHAEAIDRLVAAQPAADAIADC
                     TGLASEVEPGLVGFYQRLSQRQDDFAFDLTPVDGEAAGERAIAGVTA"
     gene            complement(2675..>3337)
                     /locus_tag="VHZ56_02885"
     CDS             complement(2675..>3337)
                     /locus_tag="VHZ56_02885"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HEX4296941.1"
                     /translation="GQVQVVFADNTHMVVGPGSSLLIQKILMQNGGTASDFAVKALGG
                     TFRFLTGDSAKTAYNISTPTATIGVRGTEFDFTVDKATGKTDVVLFAGKVILCTTGQS
                     CVTLADRCGVGETSSDSNAQVVTDSDERQAIAQSSAFRYVRSQAPLRSDFRVAQAGTC
                     GGVAIVEVALHSSSPAAPPPPPPPPPPPPPPPCPPPPPCPPPFPHWHFGDHHHRHGSS
                     DE"
BASE COUNT          584 a         1066 c         1142 g          545 t
ORIGIN      
        1 aaggggctag gccaatgccc tacgattggc tatgaagcgc cgtcggcgaa ggggctgtag
       61 ctcagttggg agagcgcatc gttcgcaatg atgaggtcag gggttcgatt cccctcagct
      121 ccaccaacgg ccgacccgac actagcaatt ccggtaactc gcagccgaaa tggctggagt
      181 tttccgcact ctcggccggc aggtcgccct gagagaataa tcggcttccg cggcgacctg
      241 ctcgacctcc ccgctgtctg caatctccaa ggacgtcggc gcctgcgaga tgcccgcccg
      301 agcgcctcct gatctcgacg gcggacgccg atcaagccgt tacaccagca atcgcgcgtt
      361 cgcccgctgc ttctccatcg actggcgtca ggtcgaaggc gaagtcgtcc tgccgttgcg
      421 acaaccgctg atagaagccg acaagacccg gctccacttc ggacgcgagc cctgtgcaat
      481 cggcgatcgc gtcagccgcc ggctgcgccg ccacgaggcg atcgatcgcc tcggcgtgcg
      541 ccttctgcaa ggtctggaac gcttcgctgc gggccagatg ttcatcaccg acgagaatga
      601 agacgtgctc cctctcctgc ttgcccttga gctccatgtg accggcatcg aggaaggcga
      661 gcccggcgct ggccacctgg gtgctcgcgg aaaccgcgat atcgtatgcg atcgccttgc
      721 aggcgccctc gacacgggac gcgacattca ctgtgtcgcc gacgcacgag tagttgaact
      781 gcgtctcgag accaaagttt ccgaccagtg ccggtccggt cgaaatgccg atgccgacgg
      841 cgatcgtcga gatcgggccg ccgatgccgt cgcccaggcc gaacgctcct tcggcattca
      901 gctgcgcgag cgcgccgcgc atttcgagag cggccatgca cgatcggtac ggatgccggt
      961 cgacatcgag cggggcgttc cagaatgcca tgatggcatc gccgatgaac ttgtcgatgg
     1021 tgccgctgtt cgcggtgatg ctggcaccca gccgcgtgaa cagcgtcgtg aggatggtca
     1081 gcagatgcgc cggctctacc gtctcgctga tcgaggtgaa gttccggata tcgagaaaga
     1141 ggatcgacag ttcgcgcgtc tcgcccccga gctttagact gtggcggcgc ttttcgatct
     1201 gctcgagcag tgccggcgcg acatagtggc cgaaggcccg gcggatcatc cgcttgtcgg
     1261 cgtcggcgat gccgtactgg aaaaagatca tcgccgaata aacgatgagc gaaccgagga
     1321 gcgggaacgt gggatcgatc agcacgctcg cttgcgcaaa gccgaaccac gacagcccgg
     1381 ccacgatgct ggcgaggaac gcgccgaccg cgagacagac ccagggcccc gagagcagcg
     1441 taatgacgac gatggcggcg ccgatcaaga cgaaggccag gacttccagg ccgttgaccc
     1501 aatcggcgcg cgacaggaac cgatggtcga caatctgctg cagcgcctgg gcgtgaacct
     1561 cgaccccagg cacgtcgtag ccgagcggcg ttccacggat gtcctgcagg ccggaggcag
     1621 atgtgccgat gagcacgatc tggccgctga tcaggtcggc tttgctcttg tagccatccg
     1681 acaggatgtc tgccgccgag acgtagaggc ttgcgggtgg ccgctcatag tagagccaga
     1741 tggatccgtc gctgttggtc ggaatcgaga aatcgccgac gcggatggcg ctgatcgttc
     1801 cctggccagt ctggtcgccg aagacgatga cgctctgctg gccgagggca atgcgcaggg
     1861 cttccagcga cagcgccggg tagagctgac cgccagccga ccacagcaat ggcaggcggc
     1921 gcacggtgcc cacgctgccg gtcggatcga gtgcgatgct gccgctacct ttggcggcat
     1981 tcaccagcac cgggagcgat tgaacgatgc cggcaaacgg tggcgccgcg gcgattggtc
     2041 cgtcgccgac gatggcgaac ccggctttcg cgcgtgcagg caatgcggtt ggccgaggca
     2101 gcgtgccgaa ccccagaacc gccggtgcgc cggcgagcgc cgcggcgaag tcggtgtcgt
     2161 agtccggcag gtcaccatgt agcggcgtca ccgtcgcgtc ggctgcgagg ctctgcgcca
     2221 gcgccgccgg cgacaggcgg tccggttccg ggaagagcac gtcaaaagcg atcgacgccg
     2281 cgccgagttc ggtcagccgc tgcgtcagcc gtgccagcac gtcgcgcggc catggccact
     2341 ggccgatctt ggcgagggag gcttcgtcaa tgtcgacgat gcgcaccggc gccgcggatg
     2401 cagggcgcgg cgcgaactgc tcgaagacat cgaagccgat gtcgcgcaac gcccggaccg
     2461 gataggggtc ggccagccgg agccacgcca gcaaggcgac cgtcagcagc ccgagcagca
     2521 tcgggagata gcgccggcgg acgacgtcag cgcgttccga ccgcgatcgc accgcaccgg
     2581 acgttgtcac gtttgccgtt cgttcggtcg ttgcgatccc ccatccaccc tggcgacggt
     2641 cggccgtccg gccagggcat ccctcgtgcg atcgttactc gtcgctggac ccgtgcctat
     2701 ggtggtggtc gccgaaatgc caatgcggaa atggcggcgg gcacggcggc ggtggggggc
     2761 acggaggtgg cggcggcgga gggggtggtg gtggcggagg cggaggtgct gcgggcgagc
     2821 ttgagtgcag cgctacttcg acgatcgcga cgccgccgca ggtgccggcc tgggcaaccc
     2881 ggaaatcgct ccggagcggg gcctgcgacc tcacgtagcg gaaggcgctg gattgggcga
     2941 tggcctggcg ctcgtcgctg tcggtcacca cctgggcgtt gctgtcactg ctcgtttcgc
     3001 cgacaccgca gcgatcggcg agcgtgacgc agctctggcc ggtcgtgcag agaatgacct
     3061 tgccggcaaa cagcacgacg tcggtcttgc ccgtcgcctt gtcgaccgtg aagtcgaact
     3121 ccgttccacg gacgccgatg gtcgcggtcg gagtggaaat gttgtaggcg gtcttggcgc
     3181 tgtcgccagt caggaaccgg aacgtgccac cgagtgcctt gacggcgaag tcgctggccg
     3241 tcccgccgtt ctgcatcagg atcttctgga tcagcagcga cgaaccgggg ccgaccacca
     3301 tgtgggtgtt gtcggcaaac accacctgca cctgtcc
//
LOCUS       DATAZA010000118         2094 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2331947, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000118 DATAZA010000000
VERSION     DATAZA010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2094
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2331947"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..233)
                     /locus_tag="VHZ56_02890"
     CDS             complement(<1..233)
                     /locus_tag="VHZ56_02890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4296942.1"
                     /translation="MIEISHVDKWYNASFQALKDCSTKVAKGEVVVVCGPSGSGKSTL
                     IKCVNALEPFQGGKIVVDGISVSDPKTDLPKLRA"
     gene            complement(244..936)
                     /locus_tag="VHZ56_02895"
     CDS             complement(244..936)
                     /locus_tag="VHZ56_02895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020508695.1"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_process: GO:0015837 - amine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX4296943.1"
                     /translation="MFANFDFDVIRRSLGYLFLDGMRFTLMLTALATFGGIVFGTLIA
                     LMRLSGYRLIGLIAGVYVDLIRSLPLVLVIFWFYFLVPYVGQWLTGSSRPLPVGAFTS
                     SLVTFIMFEAAYFSEIMRAGIQSISKGQPAAAQALGLNYSQTMRYIVLPQAFRNMLPV
                     LLTQAIVMFQDTSLVYVVSITDFLGAASNIAQRDGRLVEMYLFAAVVYFVISGFASFG
                     VRRLQSRIAIVR"
     gene            complement(947..1678)
                     /locus_tag="VHZ56_02900"
     CDS             complement(947..1678)
                     /locus_tag="VHZ56_02900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX4296944.1"
                     /translation="MNYHWNWRIFWEPAPSGTGTYLDMLLSGLVVTIEVSLCAWLIAL
                     AFGSVVGVLRTLPSRTATRIGFVYVEFFRNMPLLVQLFLWFFVLPELLPSAWGLWLKQ
                     LRNAPFYTAAIGIGLFMSARVAEQLRAGIGSLPRGQKLAATALGLTTVQTYRYVLLPM
                     AFRIIMPPLTSEFLNTIKNTSVAITIGLVELTGEARSMQEFSFQVFEAFTAATVLYLL
                     INVVVVIAMRFIERAVAVPGYISGK"
     gene            complement(1687..>2094)
                     /locus_tag="VHZ56_02905"
     CDS             complement(1687..>2094)
                     /locus_tag="VHZ56_02905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX4296945.1"
                     /translation="RNLGVNIIAAKDHAEAFLMVETDRAAAFVMDDVLLASLIAGSKD
                     PSAYVISSDAFSKPEPYGIMLRKDDLPFKKVVDAATAAVYTSGEGQKLYDKWFMQKIP
                     PKGLNLNTPIAPELKHEFAKPSDSPDPASYTAM"
BASE COUNT          465 a          651 c          637 g          341 t
ORIGIN      
        1 gcgcgcagtt tcggcagatc cgtcttgggg tcgctgacgc tgatgccgtc gaccacgatc
       61 ttgccgccct ggaacggctc cagcgcgttg acgcatttga tcagggtcga tttgccggag
      121 ccggacggac cgcagaccac cacgacctcg cccttggcga ccttggtcga gcaatccttc
      181 agcgcctgaa agctcgcatt gtaccatttg tcgacgtggc tgatttcgat catggatgcc
      241 tacctagcgg acgatggcga tgcgcgactg caggcgccgg acgccgaacg acgcaaagcc
      301 ggaaatcacg aaatagacca cggcggcgaa caggtacatc tcgaccagcc gcccgtcacg
      361 ctgggcgatg ttgctggccg cgccgaggaa atcggtgatc gacaccacat agaccagcga
      421 ggtgtcctgg aacatcacga tagcctgggt cagcagcaca ggcagcatgt tccggaacgc
      481 ctgcggcagc acgatgtagc gcatggtctg gctgtagttc aagccgagcg cctgcgctgc
      541 tgccggctgc cccttcgaga tcgactggat gccggcgcgc atgatctcgg agaaatatgc
      601 ggcctcgaac ataatgaagg tgaccagcga ggaggtgaac gcgccgaccg gaagcggccg
      661 cgacgatccg gtcagccatt gcccgacata aggcaccagg aaatagaacc agaagatcac
      721 cagcaccagc ggcagcgaac ggatcaggtc gacatacacg ccggcgataa gcccgatcag
      781 ccggtatccc gacaaccgca tcaaggcgat cagcgtgccg aacacgatcc cgccgaacgt
      841 ggcgagggcc gtcagcatca gggtgaatct catgccgtcg aggaacaggt aacccagcga
      901 ccgcctgata acgtcgaaat cgaaattggc gaacatgcgc tgggactcac ttcccgctga
      961 tatagccggg caccgccacg gcgcgctcga tgaagcgcat ggcgataacg acgacgacat
     1021 tgatcagcag atacagcacg gttgccgcgg taaaggcttc gaacacctgg aaggagaact
     1081 cctgcatcga ccgtgcctcc ccggtcagct cgaccagccc gatcgtgatc gccaccgagg
     1141 tgttcttgat ggtgttgaga aactccgagg tcagcggcgg catgatgata cggaaggcca
     1201 tcggcagcag cacatagcga taggtctgca ccgtggtcag cccgagcgcc gtggcggcca
     1261 gtttctgtcc tcgcggcaac gaaccgatgc cggcccgcaa ttgttcggcg acgcgcgccg
     1321 acatgaacag cccgatgccg atcgccgcgg tatagaacgg cgcgttacgc agctgcttca
     1381 gccacagccc ccacgccgac ggcaacaatt ccggcaacac gaagaaccac aggaacaact
     1441 gcaccaataa cggcatgttg cggaagaatt cgacatagac gaagccgatc cgcgtggctg
     1501 tcctggacgg cagcgtgcgc aacacaccga ccaccgatcc gaacgccagc gcaatcaacc
     1561 aggcgcagag cgaaacctcg atcgtcacga cgagccccga cagcagcatg tcgagatagg
     1621 tgccggtccc gctcggggcc ggctcccaga agatgcgcca gttccagtgg tagttcacgc
     1681 aagcccttac atcgccgtat aggatgccgg atcgggagaa tccgacggct tggcgaattc
     1741 gtgcttgagt tccggcgcga tcggggtgtt gaggttcaac cctttcggcg gaatcttctg
     1801 catgaaccat ttatcgtaga gcttctggcc ctcgccactg gtgtagaccg ccgccgtcgc
     1861 ggcatcgacc accttcttga agggaagatc gtccttgcgc agcatgatgc cgtaaggctc
     1921 aggcttcgag aacgcgtcgg acgagatgac gtaggcggag ggatccttcg atcccgcaat
     1981 caggctcgcc agcagcacgt cgtccatcac gaaggcggcg gcgcgatcgg tctcgaccat
     2041 caggaacgcc tcggcatggt ccttggccgc gatgatgttg acgccgagat tgcg
//
LOCUS       DATAZA010000119         9674 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3144648, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000119 DATAZA010000000
VERSION     DATAZA010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 9674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9674
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3144648"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            271..1119
                     /locus_tag="VHZ56_02910"
     CDS             271..1119
                     /locus_tag="VHZ56_02910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX4296946.1"
                     /translation="MPPLIWLVLFFLVPLAVVIQIAFSKAIVGAPPYLPLLTINDQGD
                     VQLTLHLSTFLYLGQDHLYLDALLSSVRIAVISTILALLVGYPIAYFVARASDRWRNI
                     LLMLVILPFWSSFLLRVYAWIGFLKNNGVINNLLGLLGLPHVTLLYTDFAVYLGIVYT
                     YLPFMILPLYTNLVKLDDSLLEASADLGARPFRTFLSVTLPLSAPGIVAGSLLVFIPA
                     IGEYVIPTLLGGPSTLMIGRVLWDSFFANRDWPTASAVAIAMLLVVVIPLMFLQQAQN
                     AVVDRR"
     gene            1116..1919
                     /locus_tag="VHZ56_02915"
     CDS             1116..1919
                     /locus_tag="VHZ56_02915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX4296947.1"
                     /translation="MKRGPFVTIAATLGFIFLYAPIISLVVFSFNSSKLVTVWGGFST
                     RWYGELFNNPQVLGAGILSLRIAASSATIALVLGTLCAVALTRFRRFRGKALLGAMVT
                     APLVMPDVITGLSLLLLFVSMQEIIGWPAGRGELTIIIAHATFCMAYVTVVVRSRLLD
                     LDLSLEEAAQDLGAVPARVFFDITLPIIAPALVSGWLLSFTLSLDDLVIASFVAGPDS
                     NTLPMVIFSKMKLGVSPDINALASVIIGIVAFGVAIATILQLRRPAARA"
     gene            complement(1916..2413)
                     /locus_tag="VHZ56_02920"
     CDS             complement(1916..2413)
                     /locus_tag="VHZ56_02920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003548252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX4296948.1"
                     /translation="MGDEKMGAFLTLGHINFKTRDLKASIRFYETLGFKSFLELTDED
                     HKPWIVYLRFDDQLYLELTGGGKERAPGPEPTGFNHMCITVSDIEAAARELEAKGLKL
                     MNPLNPKKGLDNNRGAWVEDPDGNRIELMEMAPDCVQYDAIKAFSAGKGMTSLVRPLQ
                     PKAKA"
     regulatory      2585..2732
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            2821..3798
                     /locus_tag="VHZ56_02925"
     CDS             2821..3798
                     /locus_tag="VHZ56_02925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX4296949.1"
                     /translation="MSQLSSTSRAVLIGPFLMVLASLALAGSNIPQSLLPTPAQYGGY
                     GMASTGMAFWQYLIATICVLPLILRIGLGNLRTRHPGLHEIRAFVSALGVHVFVYGFA
                     AGVPVWQMVTLLSTGPLFIILGSTIFLHERASTARIGAALVAFAGAIIVSGIGTGAFS
                     LMTLIPVAASALWATTDVLTKYLSREESPETLTVSLLVLITPNHLLILLVATAWATLL
                     PGFVPAGLATGFPFQLPAGAGLWILLALGVLTAVAQYLLAAAYKRADATYLQPFGDLK
                     VPLTALLGWLLLGQVPSGWFWLGAAMIVAASLFILYAEGGRRGQALAPA"
     gene            complement(3822..4643)
                     /locus_tag="VHZ56_02930"
     CDS             complement(3822..4643)
                     /locus_tag="VHZ56_02930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018239920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4296950.1"
                     /translation="MADSFSHGRFDGKIAVVTGAAQGIGEATARLLAERGVAGLLLTD
                     RNAEKGAAVAADISKSGVPAEFVPAELDDMAQVERIVPAADKRFGKVHVLANVAGLTD
                     RGTVRDTTPALWDRMFAVNVRAPFFLMQAALKVMDREAIEGTMVNIISVNAHGGTSFL
                     TPYSASKGALVTLTKNFAHSVSDRRIKVNGLNVGWVDTPGEHVTLKRFHNAPDDWLET
                     AEQAQPWGRLMKPDEVARAVAYLASDESGLMTGSIIDFNQKVQGPNETIGPSTRK"
     gene            4736..4960
                     /locus_tag="VHZ56_02935"
     CDS             4736..4960
                     /locus_tag="VHZ56_02935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296951.1"
                     /translation="MNERDVKFFRPLWIRLLITGLVAVWFCVETLYTHEQIWMFATGA
                     ALAWAVWNLFLRFPKDVPAAATSEEPPKQP"
     gene            5070..5918
                     /gene="purU"
                     /locus_tag="VHZ56_02940"
     CDS             5070..5918
                     /gene="purU"
                     /locus_tag="VHZ56_02940"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008128058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008864 - formyltetrahydrofolate
                     deformylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HEX4296952.1"
                     /translation="MPADFVLTLSCADRPGIVAAVTTELAALDANISESNQFWDRETG
                     TFFMRLAFTTPDRVDRETLERALRPAVERFGMRTALLDQGRRKRIVVMVSKFDHALLH
                     LLYQIRVGWLDAEVAAIVSNHEDSRTTATYEAIPYHCLPVGKDKAAQEAEVLQIVKES
                     GAELVVLARYMQILSNGFATRLFGQIINIHHSFLPSFKGARPYHQAHERGVKIIGATA
                     HYVTPDLDEGPIIEQETARVNHAMSPDDLIAQGRDIESRVLARAVKLHLESRVMLNGR
                     RTVVFG"
     gene            complement(5915..6952)
                     /locus_tag="VHZ56_02945"
     CDS             complement(5915..6952)
                     /locus_tag="VHZ56_02945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010910344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HEX4296953.1"
                     /translation="MDIRVQNLRKEFSRYPALHDVSLDIVSGELIALLGPSGSGKTTL
                     LRLIAGLERPTDGRIFFGDEDASGKSVQERNVGFVFQAYALFRHMSVVDNVAFGLKVR
                     PRATRPPAGEIRRRAMELLDLVQLSGLDKRFPQQLSGGQRQRVALARALAIEPRVLLL
                     DEPFGALDAQVRKELRKWLREIHDRTGHTTVFVTHDQEEALELADRLVVMGQGRIEQV
                     GTADAVYDQPVNPFVFGFIGESSALPVEIEAGELWVGGRAIGLPAGDLPHGHARLYFR
                     PHDVELVSEGAALAGVVAASRRVGGTRRVELEIGGNAERVEIDLPFDHPAGEKTRIAF
                     KPKRWKLYPAA"
     gene            complement(6979..7884)
                     /gene="cysW"
                     /locus_tag="VHZ56_02950"
     CDS             complement(6979..7884)
                     /gene="cysW"
                     /locus_tag="VHZ56_02950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HEX4296954.1"
                     /translation="MAVYEEDIAVYDSRRPDEPADAHSRPTSEPAWVKWTLIGVAVLF
                     LAALLLLPLITVFTQALTKGIGTFWGAFTDPAGGAAIRLTLLVAVIAVPLNLVFGVCA
                     AWAIAKYEFWGKSFLSTLIDIPFSVSPVISGMVYVILFGANSALYPYLQSAHLQIVFA
                     VPGIVLATIFVTFPFVARELIPLMQDQGNASEEAALSLGATGWQTFWRVTLPNIRWGL
                     LYGVLLCNARAMGEFGAVSVISGHIRGKTNTMPLHIEQLFDSYNFAGAFAMASLLALL
                     ALVTLVAKTLLELRYGDELAATRRH"
     gene            complement(7871..8725)
                     /gene="cysT"
                     /locus_tag="VHZ56_02955"
     CDS             complement(7871..8725)
                     /gene="cysT"
                     /locus_tag="VHZ56_02955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HEX4296955.1"
                     /translation="MPAASRRGWHFVKPSVIPGFGVTLGLSLTYLTLIVLIPLAGLAI
                     RSASLGPADFWRLATDQRTVDALWTSFGSSLIAAVVNVVFGLIVAWVLVRYSFRGRRL
                     LDAIVDLPFALPTAVAGISLSTLYGPSGWIGAPLARLGIKIAYTPAGIIVALIFIGLP
                     FVVRTVQPVLEELEQELEEAAATLGANRFQTITRVILPRLLPAILTGFALAFARAVGE
                     YGSVIFIASNIPYKSEIAPLLIVIRLQEFNEPAAAAIGMVMLVIAFVMLLAINLIQAW
                     ARRRYGGV"
     gene            complement(8733..9671)
                     /locus_tag="VHZ56_02960"
     CDS             complement(8733..9671)
                     /locus_tag="VHZ56_02960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011005415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX4296956.1"
                     /translation="MLNVSYDPTRELYQAYDDAFAKHWASLHPGDTVEVDISNGGSGA
                     QATAVINGLQADVVTLAVKSDIDAIGAKGLLDAGWQGKFPNKSLPYTSTIVFLVRHGN
                     PKGIKDWPDLIKDGVQVIAPNPKTSGGARWAYLAAWAWAAKTYNGDLDKEKDYIKQLY
                     QHVPVLDSGARGSTVTFTQKQLGDVELAWENDADLAVAQFGADQYDIVYPPQSILAEP
                     PVALVDKNADAHGTREVATEYLNYLYSAEGQTIAAQNHYRPVNPDLVTDKSLLDAFPK
                     VALVTIDDPIFGGWAKAQPYHFGDGGIFDQIYKPGQ"
BASE COUNT         1526 a         3350 c         3028 g         1770 t
ORIGIN      
        1 cgtctacctc ggcgacatga gcgtgcttca ggtcaagctg gatggcggca agcagatccg
       61 cgtcaccaag tccaactcgc tgcgcggcga tcccgatgcc atcgcctggg gcgaacaggt
      121 ctgggccagc tggagtggca acgccggctc ggtcctggtg tcatgacggt cgacgccgcc
      181 agcacgggaa cccgcgcggg ctggcggcca tgggggttcc tccgcaactg gcttggcatg
      241 gccgggcttg gcggccgctg gatcgttgtc ttgccgcccc tcatctggct ggtcttgttc
      301 ttcctggtgc cgctcgccgt ggtgatccag atcgccttct ccaaggccat cgtcggcgcc
      361 cctccctacc tgccgctgct gaccatcaat gaccagggcg acgtgcagct gacgctgcac
      421 ctgtcgacgt ttctctacct cgggcaggac catctctacc tagatgccct gctgagctcc
      481 gtcaggatcg ccgtgatctc gacgatcctg gcgctgctgg tcggctaccc catcgcctat
      541 ttcgtcgcgc gcgcctccga tcgctggcga aacatcctgc tgatgctggt catcctgccc
      601 ttctggagca gcttcctgct gcgcgtttac gcctggatcg gcttcctcaa gaacaacggc
      661 gtcatcaaca acctgctggg cctgctcggg ctgccgcacg tcacgctgct ctacaccgac
      721 ttcgcggtct atctgggcat cgtctatacc tacctgccct tcatgatcct gccgctctac
      781 accaacctcg tgaagctcga cgactcgctg ctcgaggcgt cggccgatct cggcgcccgc
      841 ccattccgca ccttcctctc ggtgacgctg ccgctgtcgg ctcccggcat cgtcgccggc
      901 tccctgctgg tctttattcc ggcgatcggc gagtacgtca tcccgacgct gctcggcggt
      961 ccctcgaccc tgatgatcgg ccgcgtgctt tgggattcgt tctttgccaa ccgcgactgg
     1021 ccgacggcgt cggccgtcgc catcgccatg ctgctggtgg tcgtcatccc gctgatgttc
     1081 ctgcagcagg cgcagaacgc cgtggtggac cggcgatgaa gcgcggcccc ttcgtcacca
     1141 tcgccgccac gctcggcttc atcttcctct acgcgccgat catctcgctc gtcgtttttt
     1201 ccttcaacag cagcaagctg gtgacggtct ggggcggctt ctcgacccgc tggtacggcg
     1261 agctcttcaa caacccgcag gtgctcggcg ctggcatcct gtcgctgcgc atcgcggcga
     1321 gcagcgcgac gattgcactc gtcctgggca cgctttgcgc cgtggcgctt acccgcttcc
     1381 ggcgcttccg cggcaaggcc ctgctgggag ccatggtgac cgcgccgctg gtgatgcccg
     1441 acgtgattac cggcctcagc ctgctgctgc tctttgtctc gatgcaggag atcatcggct
     1501 ggcccgccgg acgcggcgaa ctgaccatca tcatcgcgca cgcgaccttc tgcatggctt
     1561 atgtgacggt ggtcgtccgg tcgcgcctgc tcgatctcga cctcagcctc gaggaggccg
     1621 cgcaggatct cggtgccgtg ccggcgcgcg tcttcttcga catcacgctg ccaatcatcg
     1681 cgccggcgct cgtctccggc tggctgctga gcttcacgct ctcgctcgac gacctggtga
     1741 tcgcaagttt cgtcgctggc cccgactcga acaccctgcc gatggtgatc ttctcgaaga
     1801 tgaagctcgg cgtctcgccc gacatcaacg ctctcgccag cgtcatcatc ggcatcgtcg
     1861 cgttcggcgt ggcgatcgcg acgatcctgc agctgcggcg tccggcggcg cgcgcctagg
     1921 ccttggcttt tggctgcagt ggtcgcacca ggctggtcat gcccttgccg gcgctgaacg
     1981 ccttgatcgc gtcgtactgc acgcagtcgg gcgccatctc catgagctcg atgcggttgc
     2041 cgtccggatc ctcgacccag gcgccccgat tgttgtcgag gcccttcttg gggttcagcg
     2101 gattcatcag cttgagcccc ttggcctcga gttcgcgcgc tgccgcctcg atatcggaca
     2161 cggtgatgca catgtggttg aagccggtcg gctcaggtcc gggcgcccgc tctttgccgc
     2221 cgccggtgag ctcgagatag agctggtcgt cgaagcgcag gtagacgatc cacggcttgt
     2281 ggtcctcgtc ggtgagctcg aggaacgact tgaaccccag cgtctcgtag aaacggatcg
     2341 acgccttcag gtcgcgcgtc ttgaagttga tgtgccccag cgtgaggaac gcgcccatct
     2401 tctcatctcc catggtctgc gatctcttca ccgctttcgt aagcgatatt atcgataata
     2461 caaagccctc ccgcgggttt atttcaaact gcggcgatgt cgcgaaccgc ccgtttcgca
     2521 ggtcgccatt gatccagacg ttgcgcgggt ctatgtatcc atcgtcgctt cacgatgaag
     2581 cggcgaatgt tctcagggcg gggtgcaatt ccccaccggc ggtagtggca gcgatgccta
     2641 gcccgcgagc gcctccggac tgatccggag ggacagcaga tttgggtgcg attcccgagc
     2701 cgacggtaca gtccggatga aagagaacgg atgtgcccac gcggccgccg gagccattgg
     2761 cgccggcccg ccggctgtcc gcttcgcaac cctgaggaaa ctggttgtga aaggatagac
     2821 atgagccagc tttcctcgac gtcccgcgcc gtgctgatcg gccccttcct gatggtgctc
     2881 gcaagcctcg cgcttgccgg cagcaacatc ccgcaatccc tgttgccgac accggcgcaa
     2941 tacggtggct acggcatggc ctccaccgga atggcgttct ggcagtatct gattgcaacg
     3001 atctgcgtgc tgccgctgat cctgcgcatc ggcctcggca accttcgtac gcgtcacccg
     3061 ggactgcacg aaattcgcgc tttcgtttcg gcgctcggag tccacgtctt cgtctacggc
     3121 ttcgccgctg gcgttccggt gtggcagatg gtgacgctgc tctcgaccgg gccgctcttc
     3181 atcattctcg gctcgacaat attcctccat gaacgtgcct cgaccgcccg tatcggcgca
     3241 gcgctcgtcg cctttgccgg tgcgatcatc gtctcgggca tcggcaccgg tgccttcagc
     3301 ctgatgacgc tcatccccgt cgccgcctcg gcgctctggg caaccacgga cgtgctgacc
     3361 aaatacctgt cgcgcgagga atcgccggaa acgttgaccg tctcgctgct ggtgctgatc
     3421 acccccaacc acctgctgat cctgctggtg gcgacggcct gggccacgct gctgccgggc
     3481 ttcgtcccgg ccggcctcgc gaccggcttt cccttccagc tcccggccgg cgccggcctc
     3541 tggatcctgc ttgccctcgg cgtcctcacc gcggtggcgc aatatcttct ggcggcggcc
     3601 tacaagcggg ccgatgccac ctacctgcag cctttcggcg atctcaaggt gccgctgacg
     3661 gctttgctgg gttggctgtt gctggggcag gtcccgtcag gctggttctg gctcggcgcc
     3721 gccatgatcg tcgccgcctc gcttttcatc ctctacgccg aaggtggcag gcgcgggcag
     3781 gcgctcgcac cggcgtagtc gcaggagagc ggggtacggc gctacttgcg cgtggagggg
     3841 ccgatcgtct cgttcggccc ctgtaccttc tggttgaagt cgatgatcga gcccgtcatc
     3901 agcccggact cgtcgctcgc gaggtacgcg accgcccgcg ccacctcgtc cggcttcatc
     3961 agccggcccc agggctgcgc ctgctcggcc gtctcgagcc agtcgtccgg cgcgttgtgg
     4021 aagcgcttca gcgtcacgtg ctcgccgggc gtatcgaccc agccgacgtt gagcccgttg
     4081 accttgatgc ggcggtcgga aaccgaatgc gcgaaattct tggtcagcgt caccagcgcc
     4141 cccttgctgg cgctgtaggg cgtgaggaag ctcgtcccgc catgggcgtt gaccgagatg
     4201 atgttgacca tcgtcccttc gatcgcctcg cggtccatca ccttgagcgc cgcctgcatc
     4261 agaaagaacg gcgcccgcac gttgaccgcg aacatccggt cccacagtgc cggcgtcgtg
     4321 tcccgcaccg tgccgcgatc ggtgaggccg gcgacgttgg caagcacgtg caccttgccg
     4381 aaccgcttgt cggcggccgg gacgatccgt tcgacctgcg ccatgtcgtc gagctcggct
     4441 ggcacgaact ctgccggcac gccggatttg ctgatgtcgg ccgcgacggc cgcgcctttt
     4501 tccgcattgc ggtcggtgag cagcaggccg gccacgccgc gctcggcgag gagccgcgcg
     4561 gtcgcctccc cgatgccttg cgccgcgccg gtaaccacgg cgattttccc gtcgaagcgc
     4621 ccatgtgaaa agctgtcggc caatttgtcc tcacttcgtt tgctccggct tagcgcgcga
     4681 aaccgccgcg cctcaagcca tttccgcatc gccaacgttc ggttatgctg gtgaaatgaa
     4741 cgaacgcgac gtcaaattct tccgccccct gtggatccgg ctgctgataa ccggcctcgt
     4801 cgccgtctgg ttttgcgtcg agacgctcta cacccacgag cagatctgga tgttcgccac
     4861 cggcgcggcg ctcgcctggg ccgtctggaa cctctttcta cggtttccca aggatgtccc
     4921 ggccgcggcg acctccgagg aaccgcccaa gcagccgtag atcttgctgc gcgcccgcga
     4981 ccctggcagg ctcttaagcc tgaccccagg ccgcccttga ccccgctccc ggccccgacg
     5041 atagaagcgt cattgttccg gagcgcgcga tgcccgccga ttttgtcctg accctcagct
     5101 gcgccgaccg ccccggcatc gtcgcggcgg tgaccaccga gctggccgca ctcgacgcca
     5161 acatctcgga atccaaccag ttctgggatc gcgagaccgg cacgttcttc atgcgcctcg
     5221 ccttcaccac ccccgatcgc gtcgaccgcg agaccctcga gcgcgccctg cggcccgccg
     5281 tcgagcgctt cggcatgcgc accgcgctgc tcgaccaggg ccgccgcaag cgcatcgtcg
     5341 tcatggtcag caagttcgat catgcgctgc tgcacctgct gtaccagatc cgcgtcggct
     5401 ggctcgacgc cgaggtcgcc gcgatcgtct ccaaccacga ggactcgcgc accaccgcca
     5461 cctacgaggc gatcccctat cactgcctgc cggtcggcaa ggacaaggcg gcgcaggagg
     5521 ccgaagtact gcagatcgtc aaggaatcgg gggccgagct cgtggtcctc gcccgctaca
     5581 tgcaaatcct gtcgaacggt ttcgcgaccc ggctgttcgg ccagatcatc aacatccacc
     5641 actcgttcct gcccagcttc aagggcgccc ggccctacca ccaggcgcac gaacgcggcg
     5701 tcaagatcat cggcgccacc gcccattatg tgacccccga cctcgacgag ggtccgatca
     5761 tcgagcagga gaccgcacgc gtgaatcacg ccatgagccc ggacgacctc atcgcccagg
     5821 gccgtgacat cgagagccgc gtgctggcac gggcggtgaa gctccacctc gaatcgcgcg
     5881 tcatgctcaa cggccggcgg acagtcgtct tcggctaggc cgccggatag agcttccagc
     5941 gcttcggctt gaaggcgatc ctggtctttt cgccggccgg atggtcgaac ggcaggtcga
     6001 tctcgacacg ttcggcattg ccgccgatct cgagctcgac ccggcgcgtg cctccgaccc
     6061 gtcgcgacgc cgcgacgacg cccgccagcg ccgcgccctc gctcaccagc tcgacgtcgt
     6121 gcggccggaa atacagccgc gcatgcccgt gcggcagatc gcccgccggc agcccaatgg
     6181 cgcggccgcc gacccacagc tcgccggctt cgatctcgac cggcagcgcg ctcgattccc
     6241 cgatgaagcc gaagacaaag ggattgaccg gctggtcata gaccgcgtcc gccgtcccca
     6301 cctgctcgat ccgcccctgc cccatcacca ccagccggtc ggcgagttcc agcgcctcct
     6361 cctggtcgtg cgtcacgaac accgtggtgt gtccggtacg gtcgtggatc tcgcgcagcc
     6421 atttgcgcag ctccttgcgc acctgggcat cgagtgcgcc gaacggctcg tcgaggagca
     6481 gcacgcgggg ctcgatcgcc agcgcccggg ccagcgcgac gcgctgcctc tggccgccgc
     6541 tcagctgttg cggaaagcgc ttgtcgagcc cgctgagctg caccaggtcg agcagctcca
     6601 tggcgcggcg gcggatctcg ccggccggcg gccgcgtcgc gcgcggccgc accttgagcc
     6661 cgaaggcgac gttgtcgacc acgctcatgt gccggaacag cgcataggcc tggaacacga
     6721 aaccgacatt gcgctcctgc accgacttgc cggacgcgtc ttcgtcgccg aagaagatgc
     6781 gaccgtccgt cggccgctcc agtccggcga tgaggcgcag cagcgtcgtc ttgcccgagc
     6841 cggacggtcc gaggagcgcg atcagctcgc ccgaaacgat gtcgagcgac acgtcgtgca
     6901 gcgccggata gcgggagaat tccttgcgga ggttctgtac gcggatatcc aaaaactgac
     6961 gctccggttg cagtgagttc agtgacgccg cgtcgcggcg agctcgtcgc catagcgcag
     7021 ctcgagcaag gtcttggcca ccagggtgac cagcgccagc agcgccagca gcgaagccat
     7081 agcgaaagcg ccggcaaaat tgtagctgtc gaacaactgc tcgatgtgca gcggcatggt
     7141 gttggtcttg ccccgaatgt ggcccgagat taccgagacg gcgccgaatt cgcccatcgc
     7201 ccgggcgttg cagagcagca cgccgtagag cagaccccag cggatgttgg gcagggtgac
     7261 gcgccagaac gtctgccagc cggtggcccc gagcgacagc gccgcttcct cgctggcgtt
     7321 gccctggtcc tgcatcagcg gaatgagctc gcgcgcgacg aacgggaacg tcacgaatat
     7381 cgtcgccagc acgatccccg gcaccgcgaa gacgatctgc agatgggcgc tctgcaggta
     7441 ggggtagagc gcgctgttgg cgccgaacag gatcacatag accatgccgg aaatcaccgg
     7501 cgacaccgaa aacgggatgt cgatcagcgt cgacaggaac gacttgcccc agaattcgta
     7561 tttggcgatc gcccacgccg cgcagacccc gaacaccagg ttcaacggca ccgcgatcac
     7621 ggcgacgagc agcgtcaggc ggatggccgc cccaccggcg gggtcggtga acgcccccca
     7681 gaacgtaccg atgccctttg tcagcgcctg cgtgaacacc gtgatgagcg gcagcagcag
     7741 cagtgccgcg aggaacagca ccgcgacgcc gatcagcgtc catttcaccc acgccggctc
     7801 gctcgtcggc cgcgaatgcg catcggcggg ctcgtcgggt cgccggctgt catagaccgc
     7861 gatgtcttct tcatacaccg ccatagcgcc tcctggccca ggcctggatg agattgatgg
     7921 cgagcagcat gacgaaggcg atgaccagca tcaccatgcc gatggccgcg gcggccggtt
     7981 cgttgaactc ctgcaggcgg atgacgatca gcagcggcgc gatctccgac ttgtagggaa
     8041 tgttggaggc aatgaagatc accgagccgt attcgccgac ggcccgcgca aaggccagcg
     8101 cgaagccggt gaggatggcc ggcagcagcc gcggcaggat gacccgcgtg atcgtctgga
     8161 agcgattggc gccaagcgtt gcagcggcct cctcgagctc ctgttcgagt tcctcgagca
     8221 ccggctgcac ggtgcgcacg acgaacggca ggccgatgaa gatcaacgcc acgatgattc
     8281 cggccggggt ataggcgatc ttgatcccca ggcgcgccag tggagcgccg atccagccgc
     8341 tcggtccgta cagcgtcgac agcgaaatgc cggcgaccgc tgtcggcagc gcgaaaggca
     8401 ggtccacgat cgcgtcgagc aggcggcggc cgcggaagct gtagcgcacc agcacccagg
     8461 cgacgatcag cccgaagacg acgttgacca ccgccgcgat cagcgacgag ccgaagctgg
     8521 tccacagcgc atcgaccgtg cgctggtcgg tggccagtcg ccagaagtcg gcaggcccga
     8581 gcgaggccga gcggatcgcc agcccggcaa gcgggatcag cacgatgagc gtgaggtagg
     8641 tcagcgaaag acccagcgtg accccgaacc cggggatcac gctgggcttg acgaagtgcc
     8701 acccacgccg cgaggcggcg ggcatcaaac cgtcactggc caggcttgta gatctggtca
     8761 aagatgccgc cgtcgccgaa gtggtagggc tgtgccttgg cccagccgcc gaagatcggg
     8821 tcatcaatag tgaccagagc gacctttggg aaggcatcga gcagcgactt gtcggtcacc
     8881 aggtccgggt tgacaggacg gtagtggttc tgggcggcga tggtctggcc ctctgccgaa
     8941 tagagatagt tgaggtattc cgtcgcgacc tcgcgcgttc catgcgcatc ggcgttcttg
     9001 tcgaccagcg ccacgggcgg ttccgccagg atcgactgcg gcggatagac gatgtcgtac
     9061 tggtccgcgc cgaactgggc gaccgcgagg tcggcgtcgt tctcccaggc cagttccaca
     9121 tcacccaact gcttctgcgt gaacgtcacg gtcgagccgc gtgcgccgct gtcgagcacc
     9181 ggaacgtgct ggtagagctg cttgatgtag tccttttcct tgtcgagatc gccattgtag
     9241 gtcttggccg cccaggccca tgccgcaagg taggcccagc gggcgccgcc ggacgtcttc
     9301 gggttgggcg cgatcacctg cacgccgtcc ttgatcaggt ccggccagtc cttgatcccc
     9361 ttggggttgc cgtggcggac gaggaacacg atggtcgagg tatagggcag cgacttgttg
     9421 gggaatttgc cttgccagcc ggcgtccagc aggcccttcg ccccgatcgc atcgatgtcg
     9481 ctcttgaccg ccagcgtcac cacgtcggcc tgcaacccgt tgatgaccgc cgtcgcctgg
     9541 gcgccggaac cgccgttcga gatgtcgacc tcgaccgtgt cgcccggatg caggctcgcc
     9601 cagtgcttgg cgaaggcgtc gtcatacgcc tggtacagct cccgcgtcgg atcgtagctg
     9661 acgttgagca ggtg
//
LOCUS       DATAZA010000120         2558 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1867889, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000120 DATAZA010000000
VERSION     DATAZA010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2558
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1867889"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VHZ56_02965"
     CDS             <1..184
                     /locus_tag="VHZ56_02965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296957.1"
                     /translation="VPATHYFEWAQRSNDPKGKKTMFRFTVPGQQVFAFPGIWSRSAC
                     GAEGLVDSLVVSQGVV"
     gene            336..1535
                     /locus_tag="VHZ56_02970"
     CDS             336..1535
                     /locus_tag="VHZ56_02970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
                     /protein_id="HEX4296958.1"
                     /translation="MTDEMMNLRGLMEKSPDADFLREMIGFAASRLMELEVGALTGAA
                     HGEKSPERLVQRNGYRDRDWETRAGQVELRIPRLRKGSYFPFFLEPRRLAEKALTAVI
                     QEAYIQGISTRSVDDLVKAMGMSGISKSQVSRLCEEIDERVQAFLTRPIEGEWSYLWI
                     DATYVKVRSAGRIVSVAVTVAVGVNADGRREVLGVAVGPSEAETFWTEFLRSLARRGL
                     RGVKLVISDAHEGIKASVAKVMNCTWQRCRVHFMRNVMAHAGRSGRAMVGAFIGTAFA
                     QNDADAARTQWRAVADQLRPKLPKLAGFLDAAETDVLAYMSFPTAHRTKLHSTNSLER
                     LNGEIKRRTEVVGIFPNEAAIVRLVGAILLEQNDEWTVQRARYMTLESVAPLSDDPLV
                     SLPILAA"
     gene            complement(1807..>2558)
                     /locus_tag="VHZ56_02975"
     CDS             complement(1807..>2558)
                     /locus_tag="VHZ56_02975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296959.1"
                     /translation="GVAVAAAPETVAQPPAGQSWRVVRLASGFELQCWRGRALVASAW
                     RREAPAGADWAAFTRQVRDPPSPSPPAPPAAEALPVSADFSLGQGMELTPASAAPLAA
                     GLAAVLLAGAAAFWAGQALHLSGLADGLERQAAAEHALAAPPAADAAAQRRLAALHAL
                     ATRPDPVAGLAAAMEVLKAHGVAVKSFGIDGGVVTITTPYAALGKIDQISTDLSATGA
                     FSDVRPLPDSGSGAIRIQLTMKGATGQVVTE"
BASE COUNT          391 a          872 c          928 g          367 t
ORIGIN      
        1 cgtgcccgcg acacactatt tcgagtgggc gcagcgctcg aatgacccca agggcaagaa
       61 gaccatgttc aggttcaccg tgcccggcca gcaggtcttc gctttccctg gcatctggtc
      121 acggtcggcg tgcggtgctg aaggcctcgt cgacagcttg gtcgtgtccc agggcgtggt
      181 gtagctgggt ggtagcggag ccgctcgcga cgcgcgcctt ccacatggcg ccgtagcgag
      241 cgagcggctc tgcgggcagc tgcctgggcg ggtggtcatc tgcgattctt cggtagggtc
      301 gagttgcgag atcaactctg accaaggaac cgaagatgac cgacgagatg atgaacctgc
      361 gcgggctgat ggagaagagc ccggacgcgg acttcctgcg cgagatgatc ggctttgcag
      421 cctcgcggct gatggagctg gaggtgggcg ctctgacagg ggccgctcat ggcgagaaga
      481 gccccgagcg tctggtccag cgcaacgggt accgtgatcg ggactgggag acgcgggccg
      541 ggcaggtcga gctgcgcatc cccaggcttc gcaagggcag ctacttcccg ttcttcctgg
      601 agccgcggcg gctggcggag aaggcgctga ccgcggtgat ccaggaggcc tacatccagg
      661 ggatctcgac ccgctcggtg gacgacctgg tcaaggccat gggcatgagc ggcatctcca
      721 agagccaggt cagccggctg tgcgaggaga tcgacgagcg ggtgcaggcg ttcctgaccc
      781 gcccgatcga gggcgagtgg tcctatctgt ggatcgacgc gacctacgtg aaggtgcgct
      841 cggccgggcg catcgtctct gtggcggtca cggtggcggt gggtgtcaac gccgacggcc
      901 ggcgcgaggt gctgggcgtc gcggtcggcc cctcggaggc cgagacgttc tggaccgagt
      961 tcctcaggag cctcgcccga cgcggcctgc ggggcgtcaa gctggtgatc tccgacgccc
     1021 acgaaggcat caaggcgtcg gtcgccaagg tgatgaactg cacctggcag cgctgccgcg
     1081 tccacttcat gaggaacgtc atggcccatg ccggcaggag cggccgggcc atggtcggcg
     1141 ccttcatcgg cacggccttc gcccagaacg acgctgacgc cgccaggacc caatggcgcg
     1201 ccgtcgccga ccagctgcgg cccaagctgc ccaagctcgc cggcttcctc gacgcggccg
     1261 agaccgacgt cctggcctac atgtcgttcc cgactgccca ccgcaccaag ctgcactcca
     1321 ccaactcgct ggagcggctc aacggcgaga tcaagcgccg caccgaggtc gtcggcatct
     1381 tccccaacga ggcggcgatc gtgcgactgg tgggcgcgat cctgctcgag cagaacgacg
     1441 aatggaccgt ccagcgcgcc cgctacatga ccctggaatc cgtcgcgccc ttgagcgatg
     1501 atcccctcgt cagcctgccc atcctggccg cctgaccgac ccggcctcgc cggagagcgc
     1561 ggtgatcacg ccgccgcagt tacaccacgg gctgggacac gatcgtaagt caccgttaaa
     1621 tacgggctct cccgctgctc ggcgcatggg ccgccggcgc cttcagtcgt gctggacgat
     1681 gtcaaagacc gagcccggca gagggctcgg gaatgattca tcgtcaaggt cggagtacgt
     1741 cgtcgaccgt gcgatcaacg acgtagtgtc tccggcgggt acggcgagca aacccgcgcg
     1801 accttgtcat tccgtaacga cctggcccgt cgcccccttc atcgtcagct ggattcggat
     1861 cgcgcctgac cccgagtccg gcagcggccg cacgtcgctg aacgcccccg tcgccgagag
     1921 gtcggtgctg atctggtcga tcttacccag ggctgcgtac ggcgtggtga tcgtcacgac
     1981 gccgccatcg atgccgaacg acttcacggc gacgccgtgc gccttcagca cctccatggc
     2041 ggcggcgagg ccggcgacgg ggtcggggcg ggtggcgagg gcgtggagcg cggcgaggcg
     2101 ccgctgcgcg gccgcgtcgg ccgcgggcgg ggcggcgagg gcgtgctcgg cggcggcctg
     2161 gcgctccagg ccgtcggcaa ggccggagag atgcagcgcc tggccggccc agaacgccgc
     2221 ggcgccagcc agcagcacgg cggcgaggcc ggcggccagc ggcgcggcgg aagccggcgt
     2281 cagctccatg ccctggccga ggctgaagtc ggccgacacc ggcagcgctt ccgcagcggg
     2341 cggcgcgggc ggcgatgggg agggcgggtc gcggacctgg cgagtgaagg cggcccagtc
     2401 ggcgccggcc ggcgcctcgc gccgccaggc cgacgcgacc agcgcccgcc cgcgccagca
     2461 ctgcagctcg aagccgctgg cgaggcgcac cacgcgccag ctttgcccgg ccggcggctg
     2521 cgccaccgtc tccggcgcgg ccgccacggc gacgcccg
//
LOCUS       DATAZA010000121         8819 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2564684, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000121 DATAZA010000000
VERSION     DATAZA010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 8819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8819
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2564684"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..312)
                     /locus_tag="VHZ56_02980"
     CDS             complement(<1..312)
                     /locus_tag="VHZ56_02980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296960.1"
                     /translation="MRVPTLLRRLVRPLRPQTERFFVADATPVELPASSTIRRTPRRP
                     LEYRDVGFDENYDDTHLFYDVFWDGSRIVLVGPDLHDLERLVTGGVFRVDGTVVRTVE
                     RM"
     gene            complement(309..905)
                     /gene="purN"
                     /locus_tag="VHZ56_02985"
     CDS             complement(309..905)
                     /gene="purN"
                     /locus_tag="VHZ56_02985"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEX4296961.1"
                     /translation="MRPPRKRVAILISGRGSNMAALIEAARGPDYPAEIAGVFSNRAD
                     APGLAFAAAEAIPTAVLSHKDFASRELFDAGIDEILAGWRTDLVCLAGFMRILSIDFA
                     RRWSGRMLNIHPSLLPLHKGLNPQQQALDAGDSESGCTAHWVVPELDAGPSILQRRVP
                     VLAGDSAETLAARILVEEHRAYPEALAMVARGEARLAR"
     gene            complement(902..1978)
                     /gene="purM"
                     /locus_tag="VHZ56_02990"
     CDS             complement(902..1978)
                     /gene="purM"
                     /locus_tag="VHZ56_02990"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEX4296962.1"
                     /translation="MSDAPNLPSNGLSYKQAGVDIDAGNALVEAIKPAVRSTRRAGAD
                     AEIGGFGGLFDLKAAGFIDPVLVAANDGVGTKLKIAIDTGSHATIGIDLVAMCVNDIV
                     VQGAEPLFFLDYFATGRLDVDTGRAIVEGIAEGCRIAGCALIGGETAEMPGMYHGKDY
                     DLAGFAVGAAERGTLLPRGDVAPGDAIVAIASSGVHSNGFSLVRRIVEISGIDWYLPA
                     PFDPHRTLSGALLTPTRIYVKPILSALKAGIGLKALAHITGGGFVDNIPRVLPETVAA
                     HIDLGAVTVPKVFGWLARVGGLAEAEMLRTFNCGVGMICVIAAAEAERLVAHLGEQGE
                     KAAIIGRITERSGEPVTFEGTLAL"
     gene            2063..3220
                     /locus_tag="VHZ56_02995"
     CDS             2063..3220
                     /locus_tag="VHZ56_02995"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX4296963.1"
                     /translation="MTLRTQVLVWVGFTIVVILLIWLFRPILLPFIIGIAFAYILNPA
                     VKLVQRAGIGRAWASALVLLAVFGLVVGIFVVVTPLVATQVVGLANRMPGYIGALQAL
                     VQSIAPQLNDWLGPERAGQLEASLSQFLGSGVEFVGSLTAQVAQSGLTVLNTIAVLIL
                     TPVVAFYLLLDWEGMVKGIDDLLPREHRREVRQLLDQINHSIAGVIRGQGGVILVLCV
                     YYATALTLTGLNFGLVIGLMTGLLSFIPFFGFLTGLVLSMGVALVQFAPNWWLVVIVF
                     IVYMIGQFLEGNILYPRFVGQSININPVWLMFALFAFAFLFGFVGLLLAVPLAAITAT
                     LARYAIRRYKESALYRGERPARAAPPEPELALAAPEPAKRATRSPRAPGRK"
     gene            3217..3936
                     /locus_tag="VHZ56_03000"
     CDS             3217..3936
                     /locus_tag="VHZ56_03000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296964.1"
                     /translation="MTVDPAGGGQLPFDYGHQPSHLESDFIDGDGTRLALAHIRAFPN
                     WSGPLTLIEGPAKSGKSHLARIWAARAGAMLATPADLETLSADAGVRPLVLDDVERSG
                     YAEAALFHLLNQSMRDARPLLMTARLPVANWPFATDDLKSRARLAARFTLALSDDIQL
                     SQMFVKLFSDRQVAVDPRVVAYLVARMERSPEEAVVLADIADRLALAEGSAITRRIAA
                     AALAERGVAQLEFDLEGDDDE"
     gene            3938..6109
                     /locus_tag="VHZ56_03005"
     CDS             3938..6109
                     /locus_tag="VHZ56_03005"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HEX4296965.1"
                     /translation="MGEIVPEDAVAPDIAALRQSPARFVNREVSWLQFNMRVLEEAGN
                     PNHPLLERMRFVSISANNLDEFFMVRVAGLKGQVRAGIMTQSADGLTPTEQLDEIATL
                     AQHLHLEQQDAWQTLREELFDKDVVIHEKDDLSPDQVKYLQRLFREEIFPVLTPIAVD
                     PAHPFPFIPNLGFTLAFELTRPGSAQTLTALVRVPSNLDRFITLPSGLATEGRVEVVT
                     IDTLINLFLHKMFPGYEVAGSGSFRVIRDSEIEIDDEAADLVIEFESALRQRRRGQVI
                     RLEIEKKMPRALRRQISERLGATSADTFEVEGFLGLADAAKICEIDRPDLKFPPYIPR
                     YPERVRDFNGDLFAAIRAKDLLVHHPFESFDVVAQFLMQAARDPDVVAIKQTLYRTSR
                     DSPIVKALVLAAEAGKSVTALVELKARFDEEANIRWARDLERAGAQVVFGFIELKTHA
                     KMSQVVRRENGKLVSYCHLGTGNYHPITAKIYTDLSYFTTDTSITRDVARVFNFITGY
                     ARPTELEAIAVSPVNLRSTLLEHIAREVAFAERGQPANIWLKMNALVDPEIIDALYDA
                     SQKGVKIELIVRGICCLRPGIPGFSDNIRVKSVVGRFLEHSRIFCFGQGEPMPSRKAK
                     VYMSSADLMQRNLDWRVEVMVPILNKTVHEQILDRMLVAYLKDNQQSWEVLPDGSSHR
                     APLKDGEEPYSAHNYFMTNASLSGRGSARTREARDTDESDD"
     gene            6106..7647
                     /locus_tag="VHZ56_03010"
     CDS             6106..7647
                     /locus_tag="VHZ56_03010"
                     /inference="COORDINATES: protein motif:HMM:NF014587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA phosphatase family protein"
                     /protein_id="HEX4296966.1"
                     /translation="MNQYWGHDADPTAQGRIQGALPVAVLDIGSNSVRLVVYERLGRS
                     LTPLYNEKSACSLGRGLAQTGRLAYENIDRALTAIQRFALVARLMKAGEVHVLATSAV
                     RDASNSKAFVDAVEATMNARVEVLSGEAEAHFAALGVVAGIPEFAGLVGDLGGGSLEL
                     SAIAGGHDALGETHELGVIRLQDDSGRAMGRAQSVVRERLGRSNLIKAAGGGQFCAIG
                     GTWRSLAKMHQVMRKYPLHMVQHYVAKASDMQKFCNEIVDAVAAGNPMPATDSVSSSR
                     RDLVPYGAAVLAEVLKQGRFDSVVFSALGVREGYLYGLLPPEQQAVDPLLEGAEEISV
                     LRSRSPAHAADLIEFTAGFMSAIHVKETPAEERLRKVACYLSDIGWRGHPDYRGEQSV
                     DLVAYGSLAGVDHPGRAFLAEALAVRYMGLKHKSMSSSLMALAGPSANMKARLLGATF
                     RVAYPMSAAMPGVLPRARFTLEGGRLRLHLPPDLAFLAGEHLESRLEQLAGVAGIKSS
                     EIVAA"
     gene            complement(7644..>8819)
                     /gene="rnd"
                     /locus_tag="VHZ56_03015"
     CDS             complement(7644..>8819)
                     /gene="rnd"
                     /locus_tag="VHZ56_03015"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016891 - RNA endonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HEX4296967.1"
                     /translation="SKTGSMELITTTGALAAFCARAKGFDFVTVDTEFLRETTYWPKL
                     CLLQAATPEEAVLVDPLADGLSLQPFFELLSNESVVKVFHAARQDIEIFVKLTGKVPQ
                     NIFDTQVAASVCGFGDSVSYDNLVRAVTGVELDKSSRFTDWSHRPLTEKQRLYALADV
                     THLRDIYRKLVEQVTETHRWDWVEDELGVLRSIDTYVVKPENAWERFKTKLSKPRDIA
                     ALMALAAWRERRAQDSDQPRSRVLKDDALIELAMQRPTSPEGFDKLRAVQRGYGRSAA
                     AGEVVGLIRTVEALPKAELPPAAERYRGPSPKGAVGDLVRVLLKAVSEEHGVAARILA
                     TSDEIDALVLDDDADVPALRGWRRKLFGEKALAIKHGRIGLAATRKGVVEIPIKAAD"
BASE COUNT         1360 a         3025 c         2991 g         1443 t
ORIGIN      
        1 cattctctcg acggttcgaa cgacggtgcc gtccacccga aagacacccc cggtgaccag
       61 tcgctcgaga tcgtgcaggt cgggacccac cagtacgatg cggctgccgt cccagaacac
      121 gtcgtagaac agatgcgtgt cgtcgtagtt ctcgtcgaac ccgacatcgc gatattcgag
      181 cgggcggcgc ggggtgcgcc ggatcgtgga cgacgccggc agctcgaccg gcgtcgcgtc
      241 ggcaacgaag aagcgttccg tctgcgggcg aagcgggcga acgagccgcc gcagaagggt
      301 cggaactctc accgcgccag cctcgcttcg ccgcgcgcca ccatcgcgag tgcctccggg
      361 taggcgcggt gctcttcgac gagaatccgc gccgccagcg tctccgccga atcgccagcc
      421 agcaccggca cgcgccgctg caggatcgac ggcccggcgt cgagctcggg caccacccag
      481 tgcgccgtgc agccgctctc gctgtcgccg gcgtcgagcg cctgctgctg cgggttaagg
      541 cccttgtgca ggggcagcag cgaggggtgg atgttgagca tgcggccgct ccagcgccgg
      601 gcaaagtcga tcgagagaat acgcatgaag ccggcgaggc acaccaggtc cgtgcgccag
      661 ccggcgagaa tttcgtcgat cccggcatcg aagagctcgc ggctggcgaa gtccttgtgg
      721 ctgaggaccg cggtcgggat ggcttcggcc gccgcgaatg cgaggccggg agcgtccgcc
      781 cggttcgaga agacgcctgc gatttccgcc ggataatcgg gcccccgggc cgcctcgatc
      841 agcgccgcca tgttggagcc gcgaccggag atcaggatgg cgacgcgttt cctcggtggc
      901 ctcacagcgc cagcgtgccc tcgaacgtca ccggctcgcc gctgcgctcg gtgatgcggc
      961 cgatgatggc cgccttctcg ccctgttcgc ccagatgcgc gaccagccgc tccgcctcgg
     1021 cggcggcgat gacgcagatc atgccgacgc cgcagttgaa ggtgcgcagc atttccgcct
     1081 cggcgaggcc gccgactcgc gccagccagc cgaagacttt cggcacggtg actgccccca
     1141 ggtcgatgtg agcggcaacc gtttccggca gcacccgcgg gatgttgtcg acgaagccgc
     1201 cgccggtgat gtgggccagc gccttgaggc cgatgccggc cttcagcgcg ctgaggatcg
     1261 gcttcacata gatgcgggtc ggcgtcagca gcgcgcccga cagcgtgcgg tgcggatcga
     1321 acggggcggg caggtaccag tcgatgccgg aaatctcgac gatgcggcgg accagcgaaa
     1381 agccgttgga gtgaacgccc gacgacgcga tggcgacaat ggcgtcgccg ggggcgacgt
     1441 cgccccgcgg caggagggtg ccgcgctccg cggcgccgac ggcaaagccc gcgaggtcgt
     1501 agtccttgcc gtggtacatg cccggcatct cggccgtctc gccgccgatc agcgcgcagc
     1561 cggcaatgcg gcagccctcg gcgatgccct cgacgatggc ccgcccggtg tccacgtcga
     1621 gtcgcccggt ggcgaaataa tccaggaaga acagcggctc ggcgccctgc acgacgatgt
     1681 cgttgacgca catggcgacg aggtcgatgc cgatggtggc gtggctgccg gtgtcgatgg
     1741 cgatcttgag cttggtgccg acgccgtcat tggccgccac cagcaccgga tcgatgaaac
     1801 cggccgcctt gaggtcgaac agcccgccga agccgccgat ctcggcgtcg gcgccggcgc
     1861 gccgggtgga gcgcacggcg ggcttgatgg cttccacaag ggcgttgccg gcatcgatgt
     1921 cgacgcccgc ctgcttgtag ctgagcccgt ttgatggcag gttcggtgcg tcggacatgg
     1981 gcgcttgtgc cggctcgggg agggcgaaat ccgatcgcgc tgatagccgc ttgaccccga
     2041 tcgtgcaagt ccaggatcag gaatgacact cagaactcaa gtcctggtgt gggtcggctt
     2101 caccatcgtc gtcatcctct tgatctggct gttccggccg atcctcctgc cgttcatcat
     2161 cggcatcgcc ttcgcctaca tcctcaatcc ggccgtcaaa ctcgtccagc gcgccggcat
     2221 cggccgggcc tgggcgagcg ctttggtgct gctcgccgtg ttcggactgg tggtcggcat
     2281 cttcgtcgtg gtgacgccgc tggtcgcgac gcaggtggtc ggcctcgcca accgcatgcc
     2341 gggctatatt ggggcgttgc aggcgctggt gcagtcgatc gcgccgcagc tcaacgactg
     2401 gctcggcccg gagcgcgccg gccagctcga ggcgagcctg tcgcagttcc tcggctcggg
     2461 tgtcgagttc gtcggctcgc tgacggcgca ggtggcgcag agcggcctca cggtgctcaa
     2521 caccatcgcc gtgctcatcc tgacgcctgt ggtggccttc tacctgctgc tcgactggga
     2581 aggcatggtc aagggcatcg acgacctgct gccgcgcgag caccgccgcg aggtgcggca
     2641 gctgctcgac cagatcaatc actcgatcgc cggcgtcatc cgcgggcagg gcggcgtaat
     2701 cctcgtgctg tgcgtctact acgccacggc gctgaccctg accgggctca atttcggcct
     2761 cgtcatcggg ctgatgaccg gcctcctgag cttcatcccg ttcttcggct tcctcaccgg
     2821 cctggtgctg tcgatgggtg tcgcgctggt gcagttcgcg ccgaactggt ggctcgtggt
     2881 gatcgtcttc atcgtctaca tgatcggcca gttcctcgag ggcaacatcc tctatccgcg
     2941 cttcgtcggg cagagcatca acatcaaccc ggtctggctg atgttcgcgc tgttcgcgtt
     3001 cgcgttcctg ttcggcttcg tcgggctgct gctggcggtg ccgctcgcgg cgatcaccgc
     3061 gacgctcgcc cgctacgcca tccgccgcta caaggagagc gccctctatc gcggcgaacg
     3121 gccggcccgg gcggcgccgc ccgaaccgga gctggcgctg gccgccccgg aaccggccaa
     3181 gcgcgccacc cgctcgccgc gcgcccccgg acggaaatga ccgtcgatcc ggccggcggc
     3241 ggccagctgc ccttcgacta cggccaccag ccgtcgcacc tcgaatccga cttcatcgac
     3301 ggcgacggca cccggctggc gctcgcccat atccgggcgt ttcccaactg gtccgggccg
     3361 ctgacgctga tcgaggggcc tgcgaaatcc ggcaagtcgc acctggcgcg catctgggcg
     3421 gcgcgggccg gggcgatgct ggcaacgccg gccgacctcg agacgctgtc ggcggacgcc
     3481 ggggtgcggc cgctggtgct cgacgacgtc gagcgcagcg gctatgccga ggctgcgctg
     3541 ttccatctgc tgaaccagtc gatgcgcgat gcccggccgc tgctgatgac ggcgcgcttg
     3601 cccgttgcca actggccgtt cgcgaccgat gatctcaagt cgcgggcccg actcgccgcg
     3661 cgctttactc tcgctttgag cgatgacatc cagttgtcac agatgttcgt gaaattgttc
     3721 agcgaccggc aggtggcggt ggacccgcgg gtcgtcgcct accttgtcgc ccgcatggag
     3781 cgctcgcccg aggaagccgt tgtgctggcg gacatcgccg accggctggc gctggcggaa
     3841 gggtcggcga tcacccgccg catcgccgcg gcggcgttgg ccgaacgcgg cgtggcgcag
     3901 ctcgaattcg acctggaagg cgacgacgat gaatgagatg ggcgagatcg tccccgaaga
     3961 cgccgtggcc ccggacatcg ccgcgctgcg ccagagcccg gcgcgcttcg tcaaccgcga
     4021 ggtgagctgg ctgcagttca acatgcgggt gctcgaggaa gccggcaatc ccaaccaccc
     4081 gctgctcgag cgcatgcggt tcgtatcgat ctcggccaac aacctcgacg aattcttcat
     4141 ggtgcgcgtc gccggcctga agggccaggt gcgggccggc atcatgacgc agagcgccga
     4201 cgggctgacc ccgaccgagc agctcgacga gatcgcgacc ttggcccagc acctgcacct
     4261 cgagcagcag gacgcctggc agacgctgcg cgaagagctg ttcgacaagg acgtggtgat
     4321 ccacgaaaag gacgacctgt cgcccgacca ggtgaaatat ctgcagcggc tgttccgcga
     4381 ggaaatcttt ccggtgctga cgccgatcgc ggtcgatccg gcgcatcctt tcccgttcat
     4441 ccccaatctc ggcttcacgc tggccttcga gctgacccgg ccgggctcgg cccagacgct
     4501 gaccgcgctg gtgcgcgtgc cgtccaacct cgaccgcttc atcaccctgc cgtccggcct
     4561 tgcgaccgag gggcgggtcg aggtggtgac catcgatacg ctgatcaacc tcttcctgca
     4621 caagatgttt cccggctacg aggtcgccgg atctggctcg ttccgggtga tccgcgacag
     4681 cgagatcgaa atcgacgacg aggcggccga cctcgtcatc gagttcgaga gcgcgctgcg
     4741 gcagcgccgc cgcggccagg tgatccgcct cgagatcgaa aagaagatgc cgcgcgcgtt
     4801 gcgccggcaa atctcggagc ggctcggggc gacctccgcc gacaccttcg aggtcgaggg
     4861 tttcctcggg ctcgccgacg ccgccaagat ctgcgagatc gaccggccgg acctcaaatt
     4921 cccgccttac ataccgcgtt atcccgaacg cgtccgcgac ttcaacggcg acctgttcgc
     4981 ggccatccgg gccaaggacc tgctggtcca ccacccgttc gagagcttcg acgtggtcgc
     5041 ccagttcctg atgcaggcgg cgcgcgaccc cgacgtcgtc gccatcaagc agacgttgta
     5101 ccgcacgtcg cgcgacagcc cgatcgtcaa ggcgctggtg ctcgccgctg aagccggcaa
     5161 gtcggtgacg gcgcttgtgg agctgaaggc gcggttcgac gaggaggcca atatccgctg
     5221 ggcccgcgac ctcgagcggg ccggcgcgca agtggttttc ggcttcatcg agctgaagac
     5281 gcacgccaag atgagccagg tcgtgcgccg cgagaacggc aagctggtga gctattgcca
     5341 cctcggcacc ggcaactacc acccgatcac cgccaagatc tacaccgacc tcagctactt
     5401 cacgaccgat acctcgatca cgcgcgacgt ggcccgcgtg ttcaacttca taacagggta
     5461 tgcgcggccg accgagctcg aggcgatcgc tgtctcgccg gtgaatctgc gctcgacgct
     5521 gctcgagcac atcgcccgcg aagtggcctt cgccgagcgc ggccagcccg ccaatatctg
     5581 gctgaagatg aacgcgctgg tcgatccgga aatcatcgac gcgctctacg acgccagcca
     5641 gaagggcgtg aagatcgagc tgatcgtgcg cggcatctgc tgcctgcgcc ccggcattcc
     5701 gggcttttcc gacaacatcc gggtgaagtc cgtggtcggc cgcttcctcg agcattcgcg
     5761 catcttctgc ttcgggcagg gcgagccgat gccgtcgcgc aaggccaagg tctacatgtc
     5821 ctcggccgat ttgatgcagc gcaacctcga ttggcgcgtc gaggtgatgg tgcccatcct
     5881 caacaagacc gtgcacgagc agatcctcga ccgcatgctg gtggcctacc tcaaggacaa
     5941 ccagcagagc tgggaggtgc tgccggacgg ctcgtcgcat cgcgcgccct tgaaggacgg
     6001 cgaggaaccc tatagcgccc acaattactt catgaccaac gcgagccttt ccggccgcgg
     6061 cagcgcccgc acccgcgaag cgcgcgacac cgacgagagc gacgattgaa ccagtactgg
     6121 ggccatgatg cggacccgac ggcacaggga cgcatccagg gcgccctgcc ggtcgctgtc
     6181 ctcgatatcg gctcgaactc ggtgcggctc gtggtctatg agcggctcgg ccgctcgctg
     6241 acgccgctct acaacgaaaa atccgcctgc tcgctggggc gcggcctcgc gcagacgggc
     6301 cggctggcct acgagaacat cgaccgcgcg ctgacggcga tccagcgctt cgccctggtc
     6361 gcgcggctga tgaaggccgg cgaagtgcac gtgctcgcca cctctgcggt gcgggacgcc
     6421 agcaactcga aggccttcgt cgatgccgtc gaggcaacga tgaacgcccg ggtggaggtg
     6481 ctgagcggcg aggcggaggc gcacttcgcc gcgctcggcg tggttgccgg catccctgaa
     6541 ttcgccggcc tcgtgggcga tctcggcggc ggcagcctcg aactgtcggc gatcgccggc
     6601 ggccacgacg cgctgggcga gacgcacgag ctcggcgtga ttcgcctgca ggacgattcc
     6661 ggccgcgcca tgggacgcgc gcagtcggtg gtgcgcgagc gcctcggccg ctcgaacctg
     6721 atcaaggcag ccggtggcgg gcagttctgt gccatcggcg gcacctggcg gtcgctcgcc
     6781 aagatgcatc aggtgatgcg caaatatccg ctgcacatgg tgcagcacta cgtcgccaag
     6841 gcctcggaca tgcagaagtt ctgcaacgag atcgtcgacg ccgtcgccgc cggcaatccg
     6901 atgccggcca ccgacagcgt cagctcgtcg cggcgcgacc tggtgccgta cggcgccgcg
     6961 gtgctggccg aggtgctgaa gcagggccgg ttcgacagcg tcgtgttctc ggcgctcggg
     7021 gtgcgcgaag gctatctcta tgggctgctg ccgcccgagc aacaggccgt cgatccgctg
     7081 ctcgagggcg ccgaggaaat ctcggtgctg cggtcgcgct cgccggccca cgccgccgac
     7141 ctgatcgagt tcaccgccgg attcatgtcg gcgatccatg tcaaggagac gcccgcggag
     7201 gagcggctgc gcaaggtcgc gtgctacctc agcgacatcg gctggcgcgg ccatccggat
     7261 tatcgcggcg agcaaagcgt cgatctcgtc gcctacggtt cgctggccgg cgtcgaccat
     7321 ccgggccggg catttctcgc cgaggcgctg gccgtccgct acatggggct caagcacaaa
     7381 tcgatgagct cgtcgctgat ggcgctggcc ggaccgtccg ccaacatgaa ggcgcggctc
     7441 ctcggggcga cgttccgggt ggcgtatccg atgtcggcgg cgatgccggg cgtcctgccg
     7501 cgggcccgct ttacgctcga gggcggccgg ctgcggctgc acctgccgcc ggacctcgcg
     7561 ttcctggcag gcgagcacct cgagagccgg ctggagcagc tcgccggcgt cgccggaatc
     7621 aagtcgagcg agatcgtcgc ggcttagtcc gcggccttga tcgggatttc caccacgccc
     7681 ttgcgcgtcg ccgccagccc gatgcggccg tgcttgatgg ccagcgcctt ttcgccgaac
     7741 agcttgcggc gccagccgcg cagcgccggc acgtccgcgt cgtcgtcgag caccagcgcg
     7801 tcgatttcgt cggaggtggc gaggatgcgc gcggcgacgc cgtgctcctc gctcaccgcc
     7861 ttgagcagga cccgcaccag gtcgccgacg gcgcctttgg gcgaaggccc gcgatagcgc
     7921 tcggcggccg gcggcagctc ggccttgggc agcgcctcga ccgtgcggat gaggccgacg
     7981 acctcgcccg cggcggccga gcggccgtag ccgcgctgca ccgcgcgcag cttgtcgaag
     8041 ccctcgggcg acgtcggccg ctgcatcgcg agttcgatca gcgcgtcgtc cttcagcacc
     8101 cggctgcgcg gctggtcgct gtcctgcgcc cgccgctcgc gccacgccgc cagcgccatg
     8161 agcgcggcga tgtcgcgcgg cttgctgagc ttggtcttga agcgctccca ggcgttctcg
     8221 ggcttgacca cgtaggtgtc gatggagcgc agcaccccga gctcgtcctc gacccagtcc
     8281 cagcggtgcg tctcggtgac ctgctcgacc agcttgcgat agatgtcgcg caggtgcgtc
     8341 acgtcggcca gcgcgtagag ccgctgcttt tcggtgagcg gccggtgcga ccagtcggtg
     8401 aagcgcgagg atttgtcgag ctcgaccccg gtcacggcgc gcaccagatt gtcgtagctg
     8461 acgctgtcgc caaagccaca gaccgacgcc gccacctgcg tgtcgaagat gttctgcggc
     8521 accttgccgg tcagcttgac gaagatctcg atgtcctgcc gggcggcgtg gaacaccttg
     8581 accaccgact cgttggacag cagctcgaag aacggctgca ggctcagccc gtcggcgagc
     8641 ggatcgacga gcaccgcctc ctcgggcgtc gccgcctgca acaggcagag cttgggccag
     8701 taggtggttt cgcggaggaa ttcggtgtcg acggtgacga agtcgaaccc cttggcgcgc
     8761 gcgcagaacg cagccagcgc gccggtcgtg gtaatcagct ccattgatcc agtctttga
//
LOCUS       DATAZA010000122         8093 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_824072, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000122 DATAZA010000000
VERSION     DATAZA010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 8093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8093
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_824072"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..646
                     /locus_tag="VHZ56_03020"
     CDS             <1..646
                     /locus_tag="VHZ56_03020"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4296968.1"
                     /translation="VGFYGLVGAGRTEVMEAVFGLTPTTSGSIRIGGAAVSIGSPMQA
                     IRQGLAYVPEDRGRNGGILPMSIGANISLAALGRLGRGPFLSTSREAELAHRFTQLLS
                     IKAANAAQRLDQLSGGNQQKVVISKWLATDPGIIILDEPTKGIDIGSKIAVHEFIGEL
                     VGRGVAVVLVSSELDEVLGLSDRIVVMHRGRVAARLDRAAASRELIVRHASGDS"
     gene            648..1700
                     /locus_tag="VHZ56_03025"
     CDS             648..1700
                     /locus_tag="VHZ56_03025"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4296969.1"
                     /translation="MAGLAGTTSAILPGRFLLRREPALALLLLLLLVVIGVRAPGYVT
                     PGNLVTVLVDSSVLCILVVGQLFALLIRGIDLSTAANLAFVGMFLALLSEADPGLPAI
                     AYLLLAALAGLLLGALNAVFIAVIGVPPIICTLGTMVIYRGMIFILSGGAWVSSHEMS
                     QPFQTFPLETWIGLPNIVLVAIVVAASAWLFLRFSSTGRAFYAVGSSPLGATFAGISI
                     RRTTLLAFTLSGLCSGIAGYLWTARYAIAFTQAGEGLEFAVIAACFIGGVSVAGGRGS
                     VAGVLIGALFISVVQSALPFVRVSPFVQTAISGTIILIAVAVNSRAERPRGRQILEAE
                     DVQRNPGRGTLEEPSP"
     gene            1697..2689
                     /locus_tag="VHZ56_03030"
     CDS             1697..2689
                     /locus_tag="VHZ56_03030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006932482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4296970.1"
                     /translation="MSTGQSGFIATLRRLPTWELVLVVLLAAIVILNSQLSPYFLDVA
                     NLFDSTLNFDEKAMIALPVALVIVTGQIDVSVASIVSLCAVAMGLAANAGADGATVVA
                     AALATGLVAGLVNGLLVTGLRVHSIVVTIGTLSLYRGITEAVVQDGAFTKFPQPMLAL
                     GRAYLFNLVPVETVCWLLLAVVFGVILHFTTVGRRIFAIGNNPNAARYSGIAVDRYKV
                     GLFALTGLVCGIAAAFLVCRLGSVRQSIAEGSELQVVTIVVLGGVSIAGGSGTIVGVV
                     LSTLVIGALTYGLNLVNIPGIVVDLCLGGLLIASISVPRIIQFIATARRLTQPT"
     gene            2699..2992
                     /locus_tag="VHZ56_03035"
     CDS             2699..2992
                     /locus_tag="VHZ56_03035"
                     /inference="COORDINATES: protein motif:HMM:NF020317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GYD domain-containing protein"
                     /protein_id="HEX4296971.1"
                     /translation="MPTYFIFETSTGAGLSTVRDAPRRSSGVVASGKKMGVDIKQWFY
                     VTGPFDFIMQAEAPDDETVAAFVMAINSGGNVTAKFHRAYTPEAWAAMVTRLG"
     gene            3007..3804
                     /locus_tag="VHZ56_03040"
     CDS             3007..3804
                     /locus_tag="VHZ56_03040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010686689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX4296972.1"
                     /translation="MRKNKLRQIWDDGQCAVSSWLAIPSSYSAEGVARQGFDAVTVDL
                     QHGMIDVATAIPMLQAISTTDAVPMLRVPGNEPTIIMKALDAGAYGIICPMISTVDEA
                     TRFVAACRYPPQGDRSFGPARGLLYGGADYFAHANAEIVTLAMIETAAGLDNIDAILA
                     VEGLDGIFIGPNDLSLALGEPPSSDPAPGTRAAAAIDHLLARSRAAGRHAGIFCANGT
                     IGSRRRLAGFDFVVPGNEFNLLVGAARRELDLVRGGTPPVAAASQGY"
     gene            4035..5276
                     /locus_tag="VHZ56_03045"
     CDS             4035..5276
                     /locus_tag="VHZ56_03045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018067047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX4296973.1"
                     /translation="MKYLLQAGVSLAALCLTGGIALAADCGISSGKVAILSNDFEALR
                     VVADAAKECASDKVTVTANQTTEHKNLQVPALTVNPAQYTVAFVANNSIAPLLSADLI
                     RPLDDLIAKYGQELQPNQLIKVDGKTIAIAFDANSQHLFYRKDILAKAGVQPPKTYED
                     VLAAAKAIKDQGIMQYPLAAADKPGWDLGAEFVNLYIGEGGDFFDPTSAKLAINNDKG
                     VATLKLMKALTAYMPPDYLTYDADAMKAAYISGKVAMMDGWGSYANDVINPKGSAPDV
                     AANTVLAGAPTIGDNSIPAASLWWDGFSIAKNISDTDATASFQAMMHALDPSVAAAHP
                     DVAPWLMKGFQPGPAQVGVMLTASSPNAKGYPMLPYMGLLHTALSDEIGDYLKGSKDE
                     AKTLADIEAAYDAAAKEGGFL"
     gene            5356..6387
                     /locus_tag="VHZ56_03050"
     CDS             5356..6387
                     /locus_tag="VHZ56_03050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009466710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX4296974.1"
                     /translation="MPHRTFLMFILPSLLAMLVFIAAPVVSVAIQSLYVAHDKVMVSV
                     QSCSPFGCTTDMHVDAAATEVLQKKEPLGKFNGLGTYLDRNHLAVAEIGTILAANTGF
                     NDAVGRIYALPFYRALSFTLVYTFVVTPLAMLLGFVIALSVNAVSPWIKGPVIFFSLL
                     PMIITPIVGSLIVYWMIDADAILGAALQDLFHDPNLYLKASPFLTWVVLLCYGIWTNG
                     PFSFVVFYAGIQMVPSDTLESAMIDGANRWERVRFVVVPYLTPLATFVALVQLMDNFR
                     VFEPIVGFNAQANATSLSYSIYSDLNGQFSQLFSSAAATSMLTIVGVVILLVPVLVRT
                     WREFNLKAA"
     gene            6387..7268
                     /locus_tag="VHZ56_03055"
     CDS             6387..7268
                     /locus_tag="VHZ56_03055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007199013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX4296975.1"
                     /translation="MESFAHRQPPLLRIASTTFVIVWLIVAAFPFLWTVWGSFKVEGD
                     FFSRETWLNAVFGVKTALETGSPFTWAGYYGAWVTNGLWRAVGNTLIVTVCVTVISLT
                     FGTLGGYALARSGRRYSFVILIVALIFRAMPHITLVSGYLLPFFQLNVWGVLPTAIIV
                     LVAINQPFTLWMLHSFFLSIPKDLDESALVDGCSRFQAFRLAVIPVMWPGVVTTGLFS
                     FLLAYNDFAVTSMLLSEDNQTMVPRIASFLGSIEQTGKVMYAVAAVVSATVPLFILVM
                     FFQRQIVSGLTAGAVKG"
     gene            7285..>8093
                     /locus_tag="VHZ56_03060"
     CDS             7285..>8093
                     /locus_tag="VHZ56_03060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009466708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4296976.1"
                     /translation="MAEIRLKNVSKKWRGFVGVDNFTLDIADEEFLVLLGPSGCGKTT
                     TMRMIAGLEDVTEGEIWLGDRMVNRLEPKDRDISMVFQSYGLYPNLTVYENIRFPLRV
                     RKIPRELHHDKVMKAASMVELNDFLERRPAALSGGQRQRVALARAIVREPNAFLMDEP
                     LSNLDAKLRVSTRAQIKNLHHTLRTTTIYVTHDQIEAMTLADRVVVMSRGVVQQIGTP
                     REIYNNPTNTFVAGFIGSPAMNLVPGTVQSGTFSSDNIRIEGVQWRDGPVTL"
BASE COUNT         1247 a         2932 c         2403 g         1511 t
ORIGIN      
        1 cgtcggcttc tacgggctcg tcggggcagg gcgcaccgag gtgatggagg ccgtgttcgg
       61 cctgacgccc accacctcgg gcagcatccg catcggcgga gcggcagtct cgatcggcag
      121 cccgatgcag gcgatccggc agggcctcgc ctatgtgccc gaggatcgcg gccgcaatgg
      181 cggcatcctg ccgatgagca tcggcgccaa tatcagtctc gccgccttgg ggcgccttgg
      241 acgcgggccg ttcctgtcga cctcgcgcga agccgagctc gcccaccgct tcacgcagct
      301 gctgtcgatc aaggcggcga acgccgcgca gcggctggac cagctctcgg gcggcaatca
      361 gcagaaggtg gtgatcagca aatggctggc caccgatccg ggcatcatca tcctcgacga
      421 gccgaccaaa gggatcgaca tcggcagcaa gatcgccgtg cacgagttca tcggcgagct
      481 cgtcggccgc ggcgtcgccg tcgtcctcgt ctcctccgag ctcgacgagg tgctggggct
      541 ttccgatcgc attgtcgtca tgcaccgcgg ccgcgttgcc gcgcgcctcg accgggccgc
      601 ggcgagccgc gagctcatcg tccgccatgc ctcgggagac agctgacatg gccggtctcg
      661 cgggcacgac ttcggccatc cttcccgggc gcttcctgct gcggcgcgaa cccgcgctcg
      721 ccctgttgct gctgctgttg ctcgtcgtca tcggcgtccg tgctccgggc tacgtcacgc
      781 ccggcaacct ggtgacggtg ctggtcgatt cgagcgtcct ctgcatcctc gtcgtcggcc
      841 agctcttcgc cctgctgatc cgcggcatcg atctgtcgac ggcggcgaac ctcgccttcg
      901 tcgggatgtt cctcgccctc ctgtccgaag ccgatccggg acttcccgcc atcgcctacc
      961 tgctgctcgc ggcgctggcc ggcctcctgc tgggcgccct caacgccgtg ttcatcgccg
     1021 tcatcggcgt gccgccgatc atctgcaccc tgggcacgat ggtgatctat cgcggcatga
     1081 tcttcatcct ctccggcggc gcctgggtgt cgtcgcacga gatgtcccag cccttccaga
     1141 ccttcccgct cgaaacctgg atcggcttgc ccaacatcgt tcttgtcgca atcgtcgtcg
     1201 ccgcgtcggc ttggctgttc ctgcggttca gcagtaccgg ccgcgccttc tacgccgtcg
     1261 gcagcagccc gctcggcgcc accttcgccg gcatttccat ccgtcgcacc acccttctcg
     1321 ccttcactct ttccggcctc tgctccggca ttgccggcta cctctggacg gcgcgctacg
     1381 ccatcgcctt tacccaggca ggggaggggc tggagttcgc cgtcatcgcc gcctgtttca
     1441 tcggcggcgt gtcggtggcg ggcggccgcg gatccgtcgc cggggtgctg atcggcgcgc
     1501 tcttcatctc ggtcgtccaa agcgccctgc cgttcgtgcg cgtcagtccc ttcgtgcaga
     1561 cggcaatctc cggcaccatc atcctcatcg ccgttgcggt gaactcgcgg gccgaacgac
     1621 cccgcgggcg gcaaatcctc gaggctgagg acgtgcagcg caatcctggc cgcggcaccc
     1681 tcgaggagcc gtcaccgtga gcaccggcca gtctggattt atcgcgaccc tgcggcggct
     1741 ccccacctgg gagttggtgc tggtcgtcct gctcgccgcc atcgtcatcc tgaacagcca
     1801 gctttcgccc tatttcctcg acgtcgccaa cctcttcgac agcacgctca atttcgatga
     1861 gaaggccatg atcgccctgc cggtcgccct cgtcatcgtc accgggcaga tcgacgtctc
     1921 cgtcgcttcg atcgtctcgc tttgcgccgt ggcgatgggc ctcgcggcca atgccggggc
     1981 cgatggtgcg accgtggtcg ccgcggctct tgcgaccggc cttgtcgccg gcctggtcaa
     2041 cggccttctc gtcaccggtc tgcgcgtcca ttcgatcgtc gtgaccatcg gcaccctgtc
     2101 gctctatcgc ggcatcaccg aagccgtggt gcaggacggg gccttcacca aattccccca
     2161 gccgatgctc gcgctcggcc gcgcctatct cttcaatctg gtgccggtcg agaccgtctg
     2221 ctggctgctc ctcgcggtgg tcttcggcgt cattctgcac ttcaccaccg tcggtcgtcg
     2281 gatcttcgcc atcggcaaca accccaacgc cgcgcgctat tccgggatcg ccgtcgatcg
     2341 ctacaaggtc ggcctcttcg cgctcaccgg gctggtctgc ggcatcgccg cggcgttcct
     2401 cgtctgtcgg ctcggcagcg tccgccagag catcgccgag gggtcggagc tgcaggtcgt
     2461 caccatcgtc gtgctcggcg gcgtcagcat cgccggcggc agtggcacga tcgtcggcgt
     2521 ggtgctgtcg acgctggtga tcggcgcgct gacctacggg ctcaacctcg tcaacattcc
     2581 gggcatcgtc gtcgatctct gcctcggcgg cctgctgatc gcctcgatct cggtcccccg
     2641 catcatccag ttcatcgcga cggctcgtcg cctcacccag ccaacctgaa ggatcgctat
     2701 gcccacctat ttcatcttcg agacctcgac cggtgccgga ctgtcgaccg ttcgcgatgc
     2761 gccgcgccgg tcgagcggcg ttgtcgcctc cggcaagaag atgggcgtcg acatcaagca
     2821 gtggttctac gtcaccggcc ccttcgactt catcatgcag gccgaggcgc ccgacgacga
     2881 gaccgtcgcc gccttcgtca tggcgatcaa ctccggcggc aacgtcaccg cgaaattcca
     2941 tcgcgcctac acgcccgaag cctgggcagc catggtcacg cggctcggtt gatcgaggga
     3001 tccggcatgc gcaagaacaa gctcaggcag atttgggatg atggccagtg cgccgtttca
     3061 tcctggctcg ccattccatc gtcctattca gccgaaggcg tcgctcggca aggcttcgac
     3121 gccgtcaccg tcgacctgca gcacggcatg atcgacgtcg ccaccgctat cccgatgctg
     3181 caggcgatct cgaccaccga cgcggtgccc atgctgcgcg ttccgggcaa cgagccgacc
     3241 atcatcatga aggccctcga cgccggcgcc tacggcatca tctgcccgat gatctcgacg
     3301 gtcgatgagg ccacgcgctt cgtcgcagcc tgccgctacc ccccgcaggg cgatcgctcc
     3361 ttcgggccgg cccgcgggct gctctatggc ggcgccgatt atttcgcgca cgccaatgcc
     3421 gagatcgtca cgctggcgat gatcgagact gcggccgggc tcgacaacat cgacgccatc
     3481 ctcgccgtgg agggactcga cggcatcttc attggcccca acgacctgtc gctggcgctc
     3541 ggcgaaccgc cgagttccga tcccgccccg ggcacccggg ccgccgccgc catcgatcac
     3601 cttctggccc gctcccgtgc ggcaggccgg catgccggca tcttctgtgc caatggcacg
     3661 atcggcagcc gccgtcgtct tgccggcttc gacttcgtcg tgcccggcaa cgaattcaac
     3721 ctgctggtcg gggcggcgcg tcgcgagctg gacctcgtcc gcggcggcac gccgccggtc
     3781 gctgccgctt cgcagggcta ttgaagcgag gctcctgccg cagcaacaga gcccatatcc
     3841 accgcccgtt ccgcgatgca tacgaatgca gaatcaattt gcattcgtat gcaaaaccgg
     3901 tctacgtctt gctcaggcag ggcgcgggga accttttgga aggggtctgc cccaggcgaa
     3961 acgacccatc gcacgccgtg ccgcgcaaca cgcacgaacc gaccgcgcgg ttcggtgccg
     4021 acagggagaa cgatatgaaa taccttctgc aggccggcgt ctcgcttgcc gccctctgcc
     4081 tcaccggagg catcgccctc gccgccgact gcggcatcag ctccggcaaa gtcgccattc
     4141 tgtccaatga tttcgaagct ctccgcgttg tggccgacgc cgccaaggaa tgcgccagcg
     4201 acaaggtgac ggtcaccgcc aaccagacca ccgaacacaa gaacctgcag gtccccgcgc
     4261 tcaccgtgaa cccggcgcag tacaccgtgg cgttcgtcgc caacaactcg attgccccgc
     4321 tgctgtcggc cgatctcatc cgtccgctcg atgacctgat cgccaagtac ggccaggaac
     4381 tgcagccgaa ccagctgatc aaggtcgacg gcaagaccat tgccatcgcc ttcgacgcca
     4441 attcgcagca cctgttctac cgcaaggaca tcctggccaa ggccggcgtg cagccgccca
     4501 agacctacga ggacgtgctg gccgccgcca aggcgatcaa ggaccagggc atcatgcagt
     4561 atccgctggc agcagcggac aagcccggct gggacctcgg cgccgagttc gtcaacctct
     4621 acatcggcga gggcggcgat ttcttcgatc cgacctccgc caagctcgcg atcaacaacg
     4681 acaagggcgt cgcaaccctc aagctgatga aggcgctcac cgcctacatg ccgcccgact
     4741 acctgaccta cgacgccgac gccatgaagg ccgcctacat ctcgggcaag gtcgcgatga
     4801 tggacggctg gggatcctac gccaacgacg tgatcaatcc gaagggctcg gctcccgatg
     4861 ttgccgccaa caccgtgctc gccggcgcgc cgaccatcgg cgacaacagc atcccggccg
     4921 cttcgctctg gtgggacggc ttctcgatcg ccaagaacat ctcggacacc gacgcgaccg
     4981 cttcgttcca ggcgatgatg catgcgctcg atccctcggt cgccgccgcg catcccgatg
     5041 tcgcgccgtg gctgatgaag ggcttccagc ccggcccggc ccaggtcggc gtcatgctga
     5101 cggcctcctc gccgaacgcc aagggctacc cgatgctgcc ctatatgggc ctgctgcaca
     5161 ccgcgctcag cgatgagatc ggcgactatt tgaagggcag caaggacgag gccaagaccc
     5221 tcgccgacat cgaggctgcc tacgacgcgg ctgccaagga aggcggtttc ctctaagctt
     5281 cctccgatcg accgatcggg aaggcggttc gccgccttcc ctttccctgc cccggacaac
     5341 aggaaccgac agcccgtgcc gcaccggacc ttcctgatgt tcatcctgcc ctcgctgctg
     5401 gcgatgctgg tgttcatcgc ggcgcccgtg gtgtcggtgg cgatccagtc gctctacgtc
     5461 gcgcacgaca aggtcatggt ctcggtgcaa agctgcagcc cgttcggctg caccaccgac
     5521 atgcacgtcg acgcggccgc caccgaagtg ctgcagaaga aggagccgct gggcaagttc
     5581 aacggcctcg gcacctatct cgaccgcaac catctcgccg tcgccgagat cggcacgatc
     5641 ctcgccgcca acaccggctt caacgacgcc gtcggccgca tctacgcgct gcccttttat
     5701 cgcgcgctgt cgttcacgct ggtctacacc ttcgtcgtga cgccgctggc catgctgctg
     5761 ggcttcgtca tcgccctttc ggtcaacgcc gtgtcgccct ggatcaaggg gccggtcatc
     5821 ttcttttcgc tgctgccgat gatcatcacc ccgatcgtcg gctcgctcat cgtctactgg
     5881 atgatcgacg ccgacgcgat cctgggggcc gcgctgcagg acctgttcca cgatcccaac
     5941 ctctacctca aggcgtcgcc ttttctcacc tgggtcgtgc tgctctgcta cggcatctgg
     6001 accaacgggc cgttctcctt cgtggtgttc tatgcgggca tccagatggt gcccagcgac
     6061 acgctggaaa gcgccatgat cgacggcgcc aaccgctggg agcgggtgcg cttcgtcgtg
     6121 gtgccctatc tcaccccgct cgccaccttc gtcgcgctgg tgcagctcat ggacaatttc
     6181 cgggtgttcg agccgatcgt cggcttcaat gcccaggcca acgccacctc gctcagctac
     6241 tcgatctatt ccgacctcaa cggccagttc agccagctgt tctcgtcggc cgccgcgacc
     6301 tcgatgctca ccatcgtcgg tgtcgtcatc ctgctggtgc cggtactggt ccgcacctgg
     6361 cgcgaattca acctcaaggc cgcctgatgg agtcgttcgc gcaccgccag ccgccgctgc
     6421 tccgcatcgc ttcgacgacc ttcgtgatcg tctggctgat cgtcgcggcg ttcccgttcc
     6481 tgtggacggt gtggggctcg ttcaaggtcg agggcgactt cttctcgcgc gagacctggc
     6541 tcaatgcggt gttcggcgtg aagaccgcgc tcgagaccgg ctcgccgttc acctgggccg
     6601 gctattacgg cgcctgggtg accaacggcc tctggcgcgc cgtcggcaac acgttgatcg
     6661 tcaccgtctg cgtcaccgtc atctcgctga ccttcggcac gctgggcggc tatgcgctgg
     6721 cgcgctccgg acgccgctat tccttcgtca tcctgatcgt ggcgctgatc ttccgcgcca
     6781 tgccgcacat cacgctggtc tcgggctatc tgctgccgtt cttccagctc aacgtctggg
     6841 gcgtgctgcc caccgccatc atcgtgctcg tcgccatcaa ccagccgttc acgctgtgga
     6901 tgctgcactc gttcttcctg tcgatcccca aggacctcga cgagagcgca ctggtcgatg
     6961 gctgcagccg cttccaggct ttccgcctgg cggtgatccc ggtgatgtgg ccgggggtgg
     7021 tgaccaccgg gctgttcagc ttcctcctcg cctacaacga cttcgccgtg acctcgatgc
     7081 tgctcagcga ggacaaccag accatggtgc cgcgcatcgc cagtttcctc ggctcgatcg
     7141 agcagacggg caaggtgatg tacgcggtgg ccgccgtggt ctcggccacc gtgccgctct
     7201 tcatcctcgt catgttcttc cagcgccaga tcgtgtcggg cctcacggcc ggcgcggtaa
     7261 aaggctagac tttagggaac gccgatggcc gaaatccgcc tcaagaacgt ctccaagaaa
     7321 tggcgcggct ttgtcggcgt cgacaacttc acgctcgaca tcgccgacga ggaattcctc
     7381 gtgctgctcg gcccttcggg gtgcggcaag accacgacga tgcggatgat cgccggtctc
     7441 gaggacgtca ccgaaggtga gatctggctt ggcgaccgca tggtcaaccg cctcgagccc
     7501 aaggaccgcg acatctcgat ggtgttccag agctacgggc tctaccccaa cctcacggtc
     7561 tacgagaaca tccgcttccc gctgcgcgtg cgcaaaatcc ccagggagct gcaccacgac
     7621 aaggtgatga aggccgccag catggttgag ctcaacgact tcctcgagcg ccggccggcg
     7681 gcgctctcgg gcggccagcg ccagcgcgtg gcgctcgccc gcgccatcgt gcgcgagccc
     7741 aatgccttcc tgatggacga gccgctcagc aatctcgacg ccaagctgcg cgtctcgacc
     7801 cgcgcgcaga tcaagaacct ccaccatacc ctgcgcacca ccaccatcta cgtgacgcac
     7861 gaccagatcg aagccatgac gctcgccgac cgcgtcgtgg tgatgagccg cggcgtcgtg
     7921 cagcagatcg gcacgccccg cgaaatctac aacaatccca ccaacacctt cgttgccggc
     7981 ttcatcggct cgccggcgat gaacctcgtg cccggcacgg tgcagtcggg caccttcagc
     8041 agcgacaaca tccgcatcga aggcgtgcag tggcgcgatg gccccgtgac cct
//
LOCUS       DATAZA010000123         2324 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2448498, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000123 DATAZA010000000
VERSION     DATAZA010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2324
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2448498"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..411)
                     /locus_tag="VHZ56_03065"
     CDS             complement(<1..411)
                     /locus_tag="VHZ56_03065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019858029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX4296977.1"
                     /translation="MVTLLDARPRHPEKAHRPDSEVLRKPDWIRVRAPGSPVYRETQQ
                     IVREHNLVTVCEEAGCPNIGECWSKKHATMMIMGEICTRACAFCNVATGIPTQLDPRE
                     PENVASAVEKLGLNHVVITSVDRDDLIDGGAEHFA"
     gene            complement(420..716)
                     /locus_tag="VHZ56_03070"
     CDS             complement(420..716)
                     /locus_tag="VHZ56_03070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003573335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEX4296978.1"
                     /translation="MPERQDNGGELVRDETLRHVVVFLVIGAIAGWLASWIVGGSGLL
                     TYLISGVIGAFVGGYLFSALKIRLPIRSVWLSQVVTATVGAIIVVLVARLIAGS"
     gene            complement(766..1023)
                     /locus_tag="VHZ56_03075"
     CDS             complement(766..1023)
                     /locus_tag="VHZ56_03075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008526838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEX4296979.1"
                     /translation="MSPDLQSLLIFLVTGLVAGWIASLILGGKGLIRHLVTGVIGALV
                     GGYVLKLAHVTLPIENSWANDLATAVIGAIIVIVVARVIVR"
     gene            complement(1059..1319)
                     /locus_tag="VHZ56_03080"
     CDS             complement(1059..1319)
                     /locus_tag="VHZ56_03080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEX4296980.1"
                     /translation="MDGFGWIGTIVIGGLAGWIASIILKVPNNIFMNIILGIVGAVVL
                     NFVLVNLLHVPDYGGFWGQLVTAIIGAAVVMLIYRAITGRNI"
     gene            complement(1356..>2324)
                     /locus_tag="VHZ56_03085"
     CDS             complement(1356..>2324)
                     /locus_tag="VHZ56_03085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEX4296981.1"
                     /translation="GARPRVLPGIEPDGDRIWTYFEAMVPKAMPKSLVVMGSGAIGME
                     FASFYRSLGAEVTIIELLPQILPVEDAEIAAHVKKRFEKRGIKFMTEAKVAKVDKTRD
                     GIVAHVELKDGSQLDVAGDRLISAVGVQCNTENLGLEKLGVRLERGAIAVDDHGRTNV
                     AGLWAIGDVAGPPMLAHKAEHEAVIVVETIAGMKVHGLDKRRIPGCTYCEPQVASVGL
                     TEAKARETGRELKIGHFPFIGNGKAIALGEPEGMVKTIFDAKTGELLGAHMVGAEVTE
                     LIEGFVVAMNLETTEEELMHTIFPHPTLSEMMKESVLDAYGRALNI"
BASE COUNT          384 a          801 c          733 g          406 t
ORIGIN      
        1 ggcgaaatgc tcggccccgc catcgatcag atcgtcgcgg tcgaccgagg tgatgacgac
       61 gtggttgaga cccagctttt cgaccgcact ggcgacgttc tcgggctccc gcgggtcgag
      121 ctgcgtcgga atgccggtcg ccacattgca gaacgcgcag gcgcgcgtgc agatctcgcc
      181 catgatcatc atggtggcgt gcttcttcga ccagcactcg ccgatattgg ggcagccggc
      241 ctcctcgcac acggtgacga ggttgtgctc gcgcacgatc tgctgcgtct cgcgatagac
      301 cggcgagccg ggcgcgcgga cgcggatcca gtctggcttg cgcagcactt cgctgtcggg
      361 ccggtgggcc ttttccggat gccgcggacg ggcgtcgagc agggtgacca cgaaagctcc
      421 tagctgccgg cgatcagccg ggccaccagc acgacgatga tggcgcccac cgtcgccgtt
      481 accacctggc tcagccacac gctgcggatc ggcagccgga tcttcagcgc cgagaacaaa
      541 tagccaccaa cgaaggcccc gatgacgccc gagatgaggt aggtgagcaa cccgctgccg
      601 ccgacgatcc agctcgccag ccagccggcg atggcgccga tgacgaggaa caccaccacg
      661 tgccgcagcg tctcgtcgcg caccagctcg ccgccattgt cctgccgctc gggcatattc
      721 atctcagcct ccggactgct gcgatttcat atggttgcgc cgccctcacc gtacaatgac
      781 ccgcgccacc acgatcacga tgatggcgcc gatgaccgcc gtcgcgaggt cgttcgccca
      841 gctgttctcg atcggcagcg tcacgtgcgc gagcttgagc acgtagccgc cgaccagcgc
      901 gccgatgacc ccggtgacaa ggtgccggat gagccccttg ccgccgagga tgagactggc
      961 gatccacccg gcgacgagcc cggtgacgag gaagatcaac agcgactgca gatctggcga
     1021 catcagcgga atgtcctcgg gcggtcgcgg aacggccact agatgttgcg gccggtgatc
     1081 gcgcgataga tcagcatcac gaccgcggcg ccgatgatgg cggtgaccag ctggccccag
     1141 aatccgccgt agtccggtac gtgcagcagg ttgaccagca cgaagttgag gaccaccgcg
     1201 ccgacgatcc ccaggatgat gttcatgaag atgttgttgg gcaccttcag gatgatcgag
     1261 gcgatccagc ccgccaggcc gccgatgacg atcgtcccaa tccagccaaa tccgtccatt
     1321 tgcacgctcc ggtttgcggt cgcggggatc gcggcctaga tgttcagcgc ccgcccgtag
     1381 gcgtcgagca cgctctcctt catcatctca ctgagcgtgg gatgcgggaa gatggtgtgc
     1441 atcagttctt cctcggtcgt ttcgaggttc atggcgacca cgaagccttc gatcagctcg
     1501 gtgacctcgg cgccgaccat gtgcgcgccg agcagctcgc ccgttttggc gtcgaagatg
     1561 gtcttgacca tgccctcggg ctcgcccagc gcgatcgcct tgccgttgcc gatgaacggg
     1621 aaatggccaa tcttgagctc gcgcccggtt tccctggcct tggcctcggt cagcccgacg
     1681 ctggccacct gcggctcgca ataggtgcag ccgggaatcc gtcgcttgtc gaggccgtgg
     1741 accttcatgc cggcgatcgt ctcgaccacg atcaccgcct cgtgctcggc cttatgggcc
     1801 agcatcggcg gtccggcgac gtcgccgatg gcccacaggc ccgccacgtt cgtgcgccca
     1861 tggtcgtcga ccgcgatggc gccgcgctcc agcctcacgc cgagtttctc gagcccgaga
     1921 ttctcggtgt tgcactgcac gccgacggcc gagatcagcc ggtcgccggc gacgtcgagc
     1981 tgactgccgt ccttgagctc gacatgcgcg acgatgccgt ccctggtctt gtcgaccttg
     2041 gccaccttcg cctcggtcat gaacttgatg ccacgcttct cgaaccgctt cttgacgtgc
     2101 gcggcgatct cggcgtcctc gaccggcagg atctgcggca ggagctcgat gatcgtcact
     2161 tcggcgccga gcgagcggta gaacgaggcg aactccatgc cgatggcgcc cgagcccatc
     2221 accaccagcg atttcggcat cgccttgggc accatcgcct cgaagtaggt ccagatgcgg
     2281 tcgccgtccg gctcgatccc cggcagcacg cgcggccgcg cccc
//
LOCUS       DATAZA010000124         2962 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2681831, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000124 DATAZA010000000
VERSION     DATAZA010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2962
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2681831"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1544)
                     /locus_tag="VHZ56_03090"
     CDS             complement(<1..1544)
                     /locus_tag="VHZ56_03090"
                     /inference="COORDINATES: protein motif:HMM:NF044718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAN domain-containing protein"
                     /protein_id="HEX4296982.1"
                     /translation="MRGLVRSAAWLLATLVFILSISAVDAAQRSVTLLPNTDMPGGDY
                     NVIKNTTINGCQTACTGDGICGGFTFNTKTKWCFLKGVPGTQSPFTGATSGLIVTNPS
                     AADLAKARTSDLPFPASDLIDSANDFATDLPTNNPPPKGLAYPALVKAGDDAMGQANS
                     AGAMVSYQQALATNPNDPGVWLKLANAALAGADAAAAANPDSGDNDTATTASYAALEG
                     FLKSEAVPDRATLLGALAHALELRQMYRESIVTYRASLALVDDTTLQARLDKVVAQHG
                     FRVASNQVDAESATPQICAVFSDPLPAKQDLSGYVVVDDAPQVAVSVSDTQICITGVE
                     HGKRYHVKLRAGLPSADGETLRSDVDLNVYVPDRKPFVGFANNAYVMPAGLGGGLPIT
                     AVNAKSADVTVYRIGDRSIATAVRNGVFQGTLSNSTAEDIANQYGDKLWSGTVDLAQG
                     APNAETTTAIPVGDVLKGIAPGAYVATATVTGEVQSDDYSDVATQWFIVSDLGLTTIS
                     GDDGLHA"
     gene            1744..2940
                     /locus_tag="VHZ56_03095"
     CDS             1744..2940
                     /locus_tag="VHZ56_03095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018856018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEX4296983.1"
                     /translation="MKIVDLKCAVIGRNPIVRIVTDDGLSGYGEVESWKPYLKPYVLQ
                     FREALIGEDPTDVERCMLKIRQRGAFKPYGAAVSVIEHALWDIAGKAAGVPVYKLLGG
                     KVRDKVRTYNGSMRMPMGGVRPEDYAADCKWQMSLPEGFDIIKQGIAFHSPMKREFEG
                     FYYGTPNASPFHGALDSGVVTERGMHHMIECVIAMKEVLGDKVGLALDCGPGWLPSDA
                     LRFARAVEPYNLMWLEDLLTGDYVPWVNADVYRDLTMQTSTPIHTGEQIYLRQNFRQL
                     IETRAVNVVGPDPADVGGLAELKWIAEYAALHGILMAPHGTGNGLLGLAALVQVCATL
                     PSNFIAFEYPTGTDPWWYEIVDGLPEKIVSNGLIDVLERPGMGVDLIPEAAKRYLKEE
                     DAAFFD"
BASE COUNT          502 a          889 c         1080 g          491 t
ORIGIN      
        1 gcatgcagcc cgtcgtcgcc ggagatggtg gtgaggccga ggtcggagac gatgaaccat
       61 tgcgtggcga cgtcggagta gtcgtcgctc tgcacttcgc cggtgacggt ggcggtcgcc
      121 acataggcgc cgggagcgat gcccttgagc acgtcgccga ccgggatggc ggtggtggtc
      181 tcggcgttgg gcgcgccctg cgccagatcg acggtgcccg accagagctt gtcgccgtac
      241 tggttggcga tgtcctcggc ggtggagttg gagagcgtac cctggaaaac gccgttgcgc
      301 acggcggtgg cgatcgagcg gtcgccgatg cggtagacgg tgacgtcggc gctcttggcg
      361 ttgacggcgg tgatcggcag gccgccgccg aggccggcgg gcatcacata ggcgttgttg
      421 gcgaagccga cgaagggctt gcggtcgggc acatagacat tgaggtcgac atcggagcgc
      481 agcgtttcgc catcggccga gggcaggccg gcgcgcagtt tcacgtggta gcgcttgccg
      541 tgctcgacgc cggtgatgca gatctgggtg tcggacacgc tgacggcgac ctgcggcgcg
      601 tcgtcgacga cgacgtagcc cgaaaggtcc tgcttggcgg gcagcggatc ggagaagacg
      661 gcgcagatct gcggggtggc ggattcggcg tcgacctggt tggaggcgac gcggaagccg
      721 tgctgggcga cgaccttgtc gagccgggcc tgcagcgtgg tgtcgtcgac cagcgcgagg
      781 gaggcgcgat aggtgacgat cgattcgcgg tacatctggc gcagttcgag cgcatgggcg
      841 agcgcgccga gcagcgtggc gcgatcgggc accgcctcgg acttgaggaa gccctcgagc
      901 gcggcgtagc tcgccgtcgt ggcggtgtcg ttgtcgcccg aatcgggatt ggccgccgcc
      961 gcggcatcgg cgccggcaag cgccgcgttg gcgagcttca gccaaacgcc ggggtcattg
     1021 ggattggtcg ccagcgcctg ctgataggag accatggcgc cggccgaatt ggcctggccc
     1081 atggcgtcgt cgccggcttt caccagcgcc ggataggcga ggcccttggg cggcgggttg
     1141 ttggtcggca ggtcggtggc gaaatcgttg gcggaatcga tgaggtcgga ggccgggaac
     1201 ggcaagtcgg aggtgcgcgc cttggcgagg tcggcggccg aggggttggt gacgatcagc
     1261 ccgctggtgg cgccggtgaa cggcgactgg gtgcccggca cgcccttgag gaagcaccat
     1321 ttggtcttgg tgttgaaggt gaagccgccg cagatgccgt cgccggtgca ggcggtctgg
     1381 cagccattga tggtggtgtt cttgatgacg ttgtagtcgc caccgggcat atcggtgttg
     1441 ggcagcagcg tgacgctgcg ctgggcggca tcgacggcag aaatggacag gatgaaaacc
     1501 agcgtggcca gaagccacgc agccgaccgg acgagcccgc gcatgcgata taccctctaa
     1561 acgcccccgc gctttcaggt gatcctaatg tgctggggcg attgcggtaa aggtgcggca
     1621 ggacaatcaa atccggcgaa gatttcgcaa agcctgttga cgccaattgt ggcgacggcg
     1681 gcttgcgggc gatgctgaaa cgcgcgacca catgcggtcc gtcctcccgc cccgagctct
     1741 cccatgaaaa tcgtcgacct caaatgcgcc gtcatcggcc gcaaccccat cgtccgcatc
     1801 gtcactgacg acggcctttc cggctatggc gaagtcgaat cgtggaagcc atatctcaag
     1861 ccctatgtgc tgcagttccg cgaggcgctg atcggcgagg acccgaccga cgtcgagcgc
     1921 tgcatgctga agatccggca gcgcggggcg ttcaagccgt acggcgcggc ggtgagcgtc
     1981 atcgagcacg cgctgtggga catcgccggc aaggcggcgg gagtgccggt gtacaaattg
     2041 ctcggcggca aggtgcgcga caaggtgcgc acctacaacg gctcgatgcg catgccgatg
     2101 ggcggggtcc gaccggagga ctatgcggcg gactgcaagt ggcagatgtc gctgcccgaa
     2161 ggcttcgaca tcatcaagca gggaattgca ttccactcgc cgatgaagcg cgagttcgag
     2221 ggcttctact acggcacccc caacgccagc ccgttccacg gggcgctgga ttcgggcgtc
     2281 gtcaccgaac gcggcatgca ccacatgatc gagtgcgtca tcgccatgaa agaagtgctg
     2341 ggcgacaagg taggcctggc gctcgattgc gggccgggct ggctgccgtc cgacgcgctg
     2401 cgcttcgcca gggcggtcga gccctacaac ctgatgtggc tcgaggatct gctgaccggc
     2461 gactacgtgc cgtgggtcaa cgccgacgtc taccgcgacc tgacgatgca gacctcgaca
     2521 ccgatccaca ccggcgagca gatctatctc aggcagaact tcaggcagct gatcgaaacc
     2581 cgcgccgtca acgtggttgg tcccgacccg gccgatgtgg gcggcctcgc cgagctcaaa
     2641 tggatcgccg aatacgcggc gctgcacggc atcctgatgg cgccgcacgg caccggcaac
     2701 ggactcctcg ggctcgcggc gctggtgcag gtgtgcgcca ccctgcccag caatttcatc
     2761 gccttcgagt atccgacggg caccgatccg tggtggtacg agatcgtcga cggcctgccg
     2821 gaaaagatcg tcagcaacgg attgatcgac gtgctggagc gccccggcat gggggtcgac
     2881 ctgatccccg aggcagcgaa acgctacctc aaggaggagg acgcggcgtt cttcgactga
     2941 cgcctgcgcg ctactgcgcg ac
//
LOCUS       DATAZA010000125         2698 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1520604, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000125 DATAZA010000000
VERSION     DATAZA010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2698
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1520604"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2054
                     /locus_tag="VHZ56_03100"
     CDS             <1..2054
                     /locus_tag="VHZ56_03100"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX4296984.1"
                     /translation="PYGFCVWSSEFKLVMWNRHYLDIYSFPADRIEKGMPLEDVVKLS
                     GDLGNHPNQTPQQFLTAYKKELRNNRGGARAKSRELLAGGRTIETAHVYSPGLGWVVT
                     HEDVTEELASEEIVQRRKRELERQNIRLDAAVNNISQGLCMFDPRERLVICNAPYARI
                     YKLTDELVKPGTPLDDILGHLFDNGFHASGLPSRDVYIKWRHEVIERGEYDKTVVEFG
                     TRTIMMQHHPMKDGGFVSTHEDITEQRQQETRIQHLARHDALTELPNRIQFLEEMAAS
                     EAGIERGEKAAVLCIDLDHFKSVNDMLGHAVGDKLLKQASARIWGTTRETDLLARLGG
                     DEFSLLLRPVDRPSDAAAIAERIVKTMTAPFMIDGHQIAIGASVGIAMAPQDGENTDV
                     LMKNADMALYRAKSEGRSTYHFFEKEMDAAIQKRRMIEAGLRTALAANELRLVFQPLV
                     GLKENRVTCFEALLRWTHGDTQISPVEFIPVAEETGLIVPIGEWVLREACRTAMRWPS
                     DARVAVNLSAVQFKSKRLFETVQAVLNETGLPPTRLELEITESLLLNDNEQTLQTLHR
                     LRAIGIRISMDDFGTGYSSLSYLRSFPFDKIKIDRSFMRDLESRGDSLAIIKAVIGLG
                     HSLGMSTTAEGVETEEQLRAVREQGCNEVQGFLFSPPLEAPQVLQLLANEARPQLRKA
                     S"
     gene            complement(2051..2263)
                     /locus_tag="VHZ56_03105"
     CDS             complement(2051..2263)
                     /locus_tag="VHZ56_03105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296985.1"
                     /translation="MDELYRGYRIAIRQTDRWVARVTHVRGTHMPLDTQAALHEGAGR
                     CLEKARLLVDRYIAFLDDDDIGREPN"
BASE COUNT          491 a          878 c          909 g          420 t
ORIGIN      
        1 tcccttacgg cttctgcgtg tggtccagcg agttcaagct ggtcatgtgg aaccggcact
       61 atctcgacat ctattcgttc ccggccgatc gcatcgaaaa gggcatgcca ctcgaggatg
      121 tggtgaagct ctcgggcgac ctgggcaacc accccaacca gacgccgcag caatttctca
      181 ccgcctacaa gaaggagctg cgcaacaatc gcggcggggc gcgcgccaaa tcgcgcgagc
      241 ttctggcggg tgggcgcacc atcgagacgg cgcacgtcta ctcgccgggc ctgggctggg
      301 tggtgacgca tgaggacgtg accgaggagc tggcgtccga ggagatcgtg cagcggcgca
      361 agcgcgagct cgaacggcag aacatccggc tcgacgcggc ggtcaacaac atcagccagg
      421 gcctttgcat gttcgatccg cgcgagcggc tggtcatctg caacgcgccc tacgcgcgca
      481 tctacaagct gaccgatgag ctggtgaagc cgggcacgcc gctcgacgac atcctgggcc
      541 acctgttcga caacggcttt cacgccagcg gcctgccgag ccgcgatgtc tacatcaagt
      601 ggcgacacga ggtgatcgag cgcggcgaat acgacaagac ggttgtcgag ttcggcaccc
      661 gcacgatcat gatgcagcac catccgatga aggatggcgg gttcgtgtcg acgcacgagg
      721 acatcaccga gcagcgccag caggagacgc ggatccagca cctggcgcgg cacgatgcgc
      781 tgaccgagct gcccaaccgc atccagttcc tcgaggagat ggcggcctcg gaggccggca
      841 tcgagcgcgg cgagaaggcc gcggtgctgt gcatcgacct cgaccatttc aagtcggtca
      901 acgacatgct cggccatgcc gtcggcgaca agctgctgaa gcaggcgtcg gcgcgcatct
      961 ggggcacgac gcgcgagacc gacctcctgg cgcggctcgg gggcgacgag ttctcgctgc
     1021 tgctgcgacc ggtcgacagg ccgtccgacg ccgccgccat cgccgaacgc atcgtcaaga
     1081 cgatgaccgc accattcatg atcgacgggc accagatcgc catcggcgcg agcgtcggca
     1141 tcgccatggc gccgcaggac ggcgagaaca ccgacgtcct gatgaagaat gccgacatgg
     1201 cgctctaccg cgccaaatcg gagggccgct cgacctacca tttcttcgag aaagagatgg
     1261 atgcggcgat ccagaagcgg cggatgatcg aggcggggct gcgaacggcg ctggcggcga
     1321 acgagctgcg gctggtgttc cagccgctgg tcgggctcaa ggaaaaccgc gtcacctgct
     1381 tcgaggcgct gctgcgctgg acgcatggcg acacacagat ttcgccggtg gagttcatcc
     1441 cggtggccga ggagaccggc ctcatcgtgc cgatcggcga atgggtgctg cgcgaggcct
     1501 gccgcacggc gatgcgctgg ccaagcgacg cccgcgtcgc ggtcaacctt tcggcggtgc
     1561 agttcaagag caagcggctg ttcgagaccg tgcaggcggt gctcaacgag accggcctgc
     1621 cgcccacccg gctcgagctc gagatcaccg aatcgctgct gctcaacgac aacgagcaga
     1681 cgctgcagac gctgcaccgg ctgcgcgcca tcggcatccg catctcgatg gacgatttcg
     1741 gcaccggcta ttcgtcgctg agctacctgc gctcgttccc gttcgacaag atcaagatcg
     1801 accgctcgtt catgcgcgac ctcgaaagcc gcggcgacag cctcgcgatc atcaaggcgg
     1861 tgatcgggct cggccattcg ctgggcatgt cgacgaccgc cgagggggtc gagaccgagg
     1921 agcagctgcg agcggtgcgc gagcagggct gcaacgaagt gcagggcttc ctgttctcgc
     1981 cgccgctcga ggctccgcag gtgctgcagc tgctcgccaa cgaggcgcgg ccgcaattgc
     2041 gcaaggcaag ctagttcggc tcgcggccga tgtcgtcgtc gtcgagaaac gcgatgtagc
     2101 ggtcgaccag cagccgcgcc ttttcgaggc agcgcccggc gccttcgtgc agggccgcct
     2161 gggtgtcgag cggcatgtgg gtgccgcgga catgggtcac gcgggcgacc cagcggtcgg
     2221 tctgcctgat ggcgatgcgg tagccgcggt agagttcatc cacccttccg gttccttgtc
     2281 tgcgcgaatg tgacaaggtc gatacgggcg ggcgccggac agagtttcgg ccgctgcggc
     2341 ggccggcgcg attgtcgcac ctcgtcgacg ccggccgcgc gcgaacggtg cagccgacgg
     2401 cgagttccag cacgaagtgt tgcggtcggc ggagcccgtg cgaacgcagt ggcgacaccg
     2461 tcgttccgcc cgatggcgaa aagaaaccgg ggtttggagc gttgtttcag gcggattcct
     2521 gagaactaag tgacgccatg tccgtagcta catggctaca gtgcacccac ggagcaacca
     2581 ccatgacaga cttgaccccc agccgccgcc acgtcctcaa atggaccggc gtcgcggcca
     2641 cgctcgccat cgccggcagc gtgctgccga atttcggcat ttccgccgcg ctcgccgc
//
LOCUS       DATAZA010000126         2956 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2216937, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000126 DATAZA010000000
VERSION     DATAZA010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2956
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2216937"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..600)
                     /locus_tag="VHZ56_03110"
     CDS             complement(<1..600)
                     /locus_tag="VHZ56_03110"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HEX4296986.1"
                     /translation="MLSPDEQALLRAVIDRLLPADEFPAASGFGADAYILAMLGGDAA
                     PAREVIRYGLAELDRQGYRQLDAAGQDRMLKAAEGEPWFTRLVDLTAEGTYADPGNGG
                     NVDARSWRMLGYDPRLPDGPTGPPPQPDPPPGVYGPSDVIDWDVIVIGSGGGGGSAAG
                     MLAAAGKRVLVLERGRLRDYANSGHRDHLRNHRLFEYGHN"
     gene            complement(624..708)
                     /locus_tag="VHZ56_03115"
     tRNA            complement(624..708)
                     /locus_tag="VHZ56_03115"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(672..674),aa:Leu,seq:gag)
     gene            complement(810..1043)
                     /locus_tag="VHZ56_03120"
     CDS             complement(810..1043)
                     /locus_tag="VHZ56_03120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009469263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliM/FliN family flagellar motor switch protein"
                     /protein_id="HEX4296987.1"
                     /translation="MNTLDQIEVDITVELGATIMPIHHLLRMGRGAIIELNTTEQDPL
                     KVYANNTLVARGEVKVDDGHLSVEVTEKVLKLG"
     gene            1106..1834
                     /gene="lipB"
                     /locus_tag="VHZ56_03125"
     CDS             1106..1834
                     /gene="lipB"
                     /locus_tag="VHZ56_03125"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HEX4296988.1"
                     /translation="MITEALTCVGPDKLRRTDGAAVDWIVADGLVDYPLALDTMKARA
                     AAISRGEAPEAVWLVEHPPLYTAGTSARPADLLEPGRFPVHAAGRGGEYTYHGPGQRV
                     AYLMLDLKARGRDVRCLVQGLEGWIIDTLAAFNVDGETRDGRIGVWVRQPGRPGGESK
                     IAAIGVRVSKWVTTHGIALNVAPDLRHFGGIVPCGIADRGVTSLEDLGRIVSLAEVDM
                     ALRAAFEARFGPTVAAGDSLVAAA"
     gene            1919..2389
                     /locus_tag="VHZ56_03130"
     CDS             1919..2389
                     /locus_tag="VHZ56_03130"
                     /inference="COORDINATES: protein motif:HMM:NF025475.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4282 domain-containing protein"
                     /protein_id="HEX4296989.1"
                     /translation="MTSDDLKRIFMGPTLFRLDTILSPRLVPVLYVSGLAALLLWAVT
                     HLFDSFGRNFGDGLWGLLEIVVYGGFGMVVLRVACEALLVWFKANEGATDSVSRTRIS
                     SSLLEEVREAIHDMADEEDDEDMITPATVPAPGVEITPPRGPRRPARRTPAPKF"
     gene            complement(2386..>2956)
                     /locus_tag="VHZ56_03135"
     CDS             complement(2386..>2956)
                     /locus_tag="VHZ56_03135"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEX4296990.1"
                     /translation="ESMNATLQKYAPWMLGILRIVTALVYMEHGTQKLFHFPPMAPRP
                     GAGGAARGAVAAAQHVADAAASAMSSAIDTASSMLGSAADVASSAPANGGPGGGGLPP
                     IFLAGGLIEVIGGIALVLGIFSRPVAFIVAGECAVIFWWMHVPRGGIFPATNGGEAAV
                     LFCFTFLYLVFAGPGAFAIDNLMARRRTA"
BASE COUNT          462 a         1002 c         1034 g          458 t
ORIGIN      
        1 gttgtggccg tactcgaaca ggcggtggtt gcgcagatgg tcgcgatgac ccgaattggc
       61 gtagtcgcgc agccggccgc gctcgagaac caggacgcgc ttgccggcgg cggcgagcat
      121 gccggcggcg ctgccgccgc caccgccgga accgatgacg atcacgtccc agtcgatgac
      181 gtcggagggg ccatagacgc ccggcggcgg gtcgggctgc ggcggtggac cggtggggcc
      241 gtccggcagg cgcgggtcgt agccgagcat ccgccacgac cgggcgtcga cgttgccgcc
      301 gttgcccgga tcggcatagg tgccctcggc ggtgaggtcc accagacgcg tgaaccaggg
      361 ctcgccctct gctgccttga gcatgcggtc ctggccagcg gcgtcgagct gccgatagcc
      421 ctgccgatcg agctcggcca gcccgtagcg gatcacttcg cgcgccgggg cggcatcgcc
      481 gccgagcatg gcgaggatgt acgcatcggc gccgaacccg ctggccgcgg gaaactcgtc
      541 ggccggcagc agccggtcga tcaccgcgcg cagcagcgcc tgttcatctg gggagagcat
      601 tgcgtcccga ctttaaggga cgatggtgcg gtcgagaaga ctcgaacttc cacgccttgc
      661 ggcacagcga cctcaacgct gcgcgtctac caattccgcc acgaccgcac gccatggtag
      721 cgccccgccg aggcggcgaa gcgaggctgc gtgtagcaaa cggtgccggg gcccacaagc
      781 gattaaatcg ccggcgtgga aggcgccggt cagccgagtt tcaggacctt ttcggtcact
      841 tcgaccgaca aatgcccgtc gtcgaccttg acctcgcccc gcgccaccag cgtgttgttg
      901 gcatagacct tgagggggtc ctgctcggtg gtgttgagct cgatgatggc gccgcgtccc
      961 atccgcaaca gatggtggat gggcatgatg gtcgcaccga gctcgacggt gatgtcgact
     1021 tcaatctgat cgagagtgtt catatatagt tccgacgcgc tccgctgaat caccgcggag
     1081 accccgccac gaacatcggc cgccgatgat taccgaagcg ttaacctgcg tgggacccga
     1141 caagcttcgc cgcaccgacg gagccgcggt cgactggatc gttgccgacg ggctggtcga
     1201 ctatccgctg gcgctcgaca ccatgaaggc gcgtgcggcg gcgatctcgc ggggcgaggc
     1261 gcctgaagcc gtgtggctgg tcgagcatcc gccgctctat accgcgggca cctccgcacg
     1321 gccggccgac ctgttggaac cgggccggtt tcccgtccat gccgccggcc gcggcggcga
     1381 atacacttat cacgggcccg gccagcgcgt ggcctacctg atgctcgacc tcaaggcccg
     1441 ggggcgcgac gtgcgctgcc tcgtgcaggg actcgagggc tggatcatcg atacgctcgc
     1501 cgccttcaac gtcgatggcg agacccgcga cggccgcatc ggggtctggg ttcgacaacc
     1561 gggtcggccg ggcggcgaga gcaagatcgc cgcgatcggc gtgcgggtca gcaaatgggt
     1621 cacgacgcac ggcatcgcgc tcaatgtcgc cccggacctc cggcatttcg gcggtatcgt
     1681 gccctgcggc atcgccgacc ggggcgttac cagcctcgag gatctcggcc ggatcgtctc
     1741 gctggccgag gtggacatgg cgttgcgggc ggcgttcgag gcgcggttcg gcccgacggt
     1801 tgccgcgggc gacagtcttg tcgccgccgc ctgagcgccg catcttccgc ttctgcccgc
     1861 gcctccgagg cggaaaactg ctatctgatg cgcgactcct gggattgggg acccgccgat
     1921 gacctccgac gatttgaagc gcatcttcat gggcccgacg ctgttccggc tcgacaccat
     1981 cctgtcgcca cggctggtgc ccgtgctcta tgtcagcggc cttgcggcac tgctgctgtg
     2041 ggcggtgacg cacctgttcg acagcttcgg gcgcaatttc ggcgacggcc tgtgggggct
     2101 gctggaaatc gtcgtctatg gcggattcgg catggtggtg ctgcgcgtcg cctgcgaagc
     2161 gctgctggtc tggttcaagg ccaatgaggg cgccaccgat tcggtcagcc gcacccgcat
     2221 ttcatcgagc ctgctcgagg aggtgcgcga ggccatccac gacatggccg acgaggagga
     2281 cgacgaggac atgatcacgc cggcgacggt gcccgccccc ggcgtcgaga tcacgccgcc
     2341 gaggggtccg cgccgtccgg cgcgccggac cccggcaccg aagttctagg cggtccggcg
     2401 ccgggccatg aggttatcga tggcgaaggc gcccggcccg gcaaacacca gatagaggaa
     2461 ggtgaagcag aacagcacgg ctgcctcgcc gccgttggtc gccgggaaaa tgccgccgcg
     2521 cggcacgtgc atccaccaga agatcacggc gcactcgccg gcgacgatga acgccaccgg
     2581 gcggctgaag atgcccagca ccagcgcgat gccgccgatc acctcgatca gcccgccggc
     2641 gaggaaaatc ggcggcagcc cgccgccgcc cgggccgccg ttcgcaggcg cactcgaggc
     2701 cacatcggcg gcgctgccca gcatcgagct ggcggtatcg atggcgctgc tcatggccga
     2761 ggccgccgca tcggccacgt gctgcgccgc tgcgacagcg ccgcgggccg cgccgccggc
     2821 gcccggccgc ggcgccatcg gcgggaaatg gaacagcttc tgcgtcccgt gctccatata
     2881 gaccagcgcg gtcacgatgc ggaggatgcc cagcatccac ggggcgtatt tctggagagt
     2941 ggcgttcatc gattca
//
LOCUS       DATAZA010000127         2874 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_592697, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000127 DATAZA010000000
VERSION     DATAZA010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2874
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_592697"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(53..481)
                     /locus_tag="VHZ56_03140"
     CDS             complement(53..481)
                     /locus_tag="VHZ56_03140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4296991.1"
                     /translation="MARKPGRRGKFEEAQAPFALDAPDLQAVFAAYGWCCGFTGLDLR
                     TEATADPAGALLRLAPLGPITLGAVIPASLEAIYAYERGHLALGSRCQFLVALDRIDP
                     EFLERLNPIGRLTLPADTAFAPRADLLKVHRAAFVEGLID"
     gene            612..1784
                     /locus_tag="VHZ56_03145"
     CDS             612..1784
                     /locus_tag="VHZ56_03145"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008128060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEX4296992.1"
                     /translation="MSALERALTIEDLKAIARRRVPKMFFDYADSGAWTEGTYRANEA
                     DFQKITFRQRVAVDMSNRSLATTMMGQEVSMPVGIAPVGSTGMQQADGEIKAARAAEK
                     AGIPFTLSTMAICSIEDIAENTSAPFWYQLYVMRDRDFVLRLIDRAKAAKCPVLVLTM
                     DLQILGQRHKDLRNGLLVPPKFTPKFMFEMARKPAWAMGMLGTKRRTFRNIAGHVKDA
                     TNLSSLTIWSREQFEQKLNWTDVRWIKDRFGGPVLVKGVLDAEDARLAIANGADGIIV
                     SNHGGRQLDGAPSSIRVLPSIVDAVGDKTEVFMDGGIRSGQDVLKALALGARGTFIGR
                     AMVYGLGAGGEAGVTRSLQIIHDEMDVTLALMGERDVRNVGLKNIYSNDLERRQGY"
     gene            complement(1810..2631)
                     /locus_tag="VHZ56_03150"
     CDS             complement(1810..2631)
                     /locus_tag="VHZ56_03150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HEX4296993.1"
                     /translation="MTAAAAFEINADALHAFADGQLGATEQAAVERFLAVHPEAAAEL
                     AQWRLQNDALHALFDPVAGEPVPARLAPRRIAHDVRTGRGRMIRNLAAAIVLVAVSGS
                     LGWYTRGALWAEEPMSERLIDTAVVAHALYVQENAHAVEAAAGAPNLMRWLSNRIDAP
                     IDAPSLADQGFSFLGGRLLPGEIGEHAHGPAAQLMYENGSAQRVTLYITAALPDKKEV
                     WKFESRGSVEAYYWANDAVTCTIVSDLPEAQVRKLGTAVFEQLTRRPDSSWNPTG"
     gene            complement(2628..>2874)
                     /locus_tag="VHZ56_03155"
     CDS             complement(2628..>2874)
                     /locus_tag="VHZ56_03155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008599206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /protein_id="HEX4296994.1"
                     /translation="SVAPAQHGRIALAEIARAIDTLALEQREALLLVVLEGLSYAEAA
                     DVLGIPMGTLMSRLGRARAALRTLTGSGEEPKLRTVK"
BASE COUNT          487 a          922 c         1027 g          438 t
ORIGIN      
        1 gtgagcgtga tcggcaacgc gctgcggctc aacacggtaa agctctagcg gctcagtcga
       61 tcaggccttc gacgaaggcc gcgcgatgga ccttcagcag atcggcgcgc ggcgcgaagg
      121 cggtatcggc gggcaatgtc agccggccga tgggattgag gcgctcgagg aattccggat
      181 cgatgcggtc gagggcgacg aggaactggc agcgcgagcc gagcgccagg tggccacgct
      241 cataggcgta gatggcctcg agcgaggcgg gaatgaccgc gccgagcgtg atcggaccga
      301 gcggggcgag tcgtagcagc gcccctgccg ggtcggcagt cgcttcggtg cgaaggtcga
      361 ggccggtaaa gccacagcac cagccatagg cggcaaagac cgcctggagg tccggcgcgt
      421 cgagcgcaaa cggcgcctgc gcttcctcga acttgccgcg cctgccgggc ttccgggcca
      481 atccgccacc tcgcgcctac gcgaaacatc gtaaggtgtt ctgcgtggaa agggcaaatc
      541 ggcaactaac atgttagttg accactaaca tgtcagtggc tagcgtgcgc ccggcagcaa
      601 ggggaaatgc gatgtctgct ctcgagcgcg cgctcaccat cgaggacctg aaggcgatcg
      661 cccgccggcg ggtaccgaag atgttcttcg actacgccga ttccggcgcg tggacggaag
      721 gcacctatcg cgccaacgag gcggatttcc agaagatcac cttccgccag cgcgtcgcgg
      781 tcgacatgtc gaaccgctcg ctggcgacca cgatgatggg acaggaggtg tcgatgccgg
      841 tcggcatcgc gccggtcggc tcgaccggca tgcagcaggc ggatggagag atcaaggcgg
      901 cgcgcgctgc cgagaaggcc ggtatcccgt tcacgctgtc gacgatggcg atctgctcga
      961 tcgaggacat cgccgagaac accagcgcgc cgttctggta ccagctctac gtgatgcggg
     1021 accgcgactt cgtcctcagg ctgatcgacc gggccaaggc ggccaaatgc ccggtgctgg
     1081 tgctgacgat ggacctgcag atcctcgggc agcggcacaa ggatctgcgc aacggcctgc
     1141 tggtgccgcc gaagttcacc ccgaaattca tgttcgagat ggcgcgcaag ccggcctggg
     1201 cgatgggcat gctgggcacg aagcggcgca cgttccgcaa tattgccggc cacgtgaagg
     1261 acgccaccaa tctcagttcg ctgacgatct ggagccgcga gcagttcgag caaaagctca
     1321 actggaccga cgtgcgctgg atcaaggacc gcttcggcgg gccggtactg gtcaagggcg
     1381 tgctcgatgc cgaggatgcg cggctggcga tcgccaatgg cgccgacggc atcatcgtct
     1441 ccaaccatgg cggccggcag ctcgacggcg cgccgtcgtc gatccgcgtg ctgccctcca
     1501 tcgtcgatgc ggtcggcgac aagaccgagg tcttcatgga tggcggcatc cgctcgggcc
     1561 aggacgtgct gaaggcgctg gcgctcggcg ccaggggcac cttcatcgga cgcgcgatgg
     1621 tctatggcct cggcgccggc ggcgaggccg gggtgacgcg ctcgctgcag atcatccacg
     1681 acgagatgga cgtgacgctg gcgctgatgg gcgagcgcga cgtacgcaat gtcgggctca
     1741 agaacatcta ctccaacgat ctcgagcggc ggcagggcta ctagcgccca ccgccgcctc
     1801 cgcgatcgat cagcccgtcg ggttccagct cgaatccggg cggcgggtca gctgctcgaa
     1861 caccgcggtg ccgagcttgc gcacctgcgc ctcgggaagg tcggaaacga tcgtgcaggt
     1921 caccgcgtcg ttggcccagt aataggcctc gacgctgccg cggctctcga acttccagac
     1981 ttcctttttg tccggcaacg cggcggtgat gtagagggtc acgcgctgcg ccgagccgtt
     2041 ctcgtacatc agctgggcgg ccggtccgtg cgcatgctcg ccgatctcgc cggggagcag
     2101 gcggccgccg aggaagctga acccctggtc ggcgaggctc ggcgcatcga tcggcgcgtc
     2161 gatgcggttg gagagccagc gcatcaggtt gggagcgccc gccgctgctt cgacggcgtg
     2221 ggcattttcc tgcacgtaga gcgcgtgggc gacgacggcg gtgtcgatga gccgctcgct
     2281 catgggctct tcggcccaca gcgcgccgcg cgtgtaccag ccgaggctgc cggacaccgc
     2341 gacgaggaca atcgcagccg cgaggttgcg gatcatccgc ccgcggcccg tcctgacgtc
     2401 gtgggcgatg cgccgtggcg ccagccgggc cggcaccggc tcgccggcga ccggatcgaa
     2461 caaagcgtgc agagcgtcgt tctggagccg ccactgggcg agctcggcgg cggcctcggg
     2521 atggaccgcg aggaagcgct cgaccgcggc ctgctcggta gcgccgagct gcccgtcggc
     2581 aaaggcgtgg agcgcatcgg cgttgatctc gaaggcggcg gcggcggtca tttcacggtc
     2641 ctcagtttcg gttcctcgcc ggaaccggtc agcgtccgca gcgccgcgcg ggcgcggccc
     2701 aggcgcgaca tcagcgtgcc catcggaatg ccaagcacgt cggcggcttc cgcatagctc
     2761 aggccctcga ggacgacgag cagcagcgct tcgcgctgtt caagggcgag ggtgtcgatg
     2821 gcccgcgcga tctcggcgag ggcgatgcgt ccatgctggg cgggagcaac cgat
//
LOCUS       DATAZA010000128         2792 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3609782, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000128 DATAZA010000000
VERSION     DATAZA010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2792
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3609782"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            188..964
                     /locus_tag="VHZ56_03160"
     CDS             188..964
                     /locus_tag="VHZ56_03160"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX4296995.1"
                     /translation="MPQFAHDRASVHYEITGSGPPLLLVAGIASDSASWGPLLPLLSN
                     RRLILVDNRGSGQTRVEGPIELDEMAADCAALVDHLGLGTVDVAGHSLGGYVALALAA
                     KHPERVRRLVTMATGAISAPARVLFHDLARLYFTLPPEDWFRLLYQWLFSGAFFADEA
                     TVARAAAASASYAHRQSPGDFARQVAAIDRYPGVDLAAIACPVLALVAERDLLARDDA
                     VASMHAPIRDCRLLTISGAAHSIHWEQPHAVATAIDEFLG"
     gene            complement(961..1704)
                     /locus_tag="VHZ56_03165"
     CDS             complement(961..1704)
                     /locus_tag="VHZ56_03165"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008191830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX4296996.1"
                     /translation="MARLTGKRAIVTGGASGFGAGIVRKFLAEGASVMVADINGDAAR
                     AMAVEVGATASQVDVSKDASVAAMVEAAYAAFGGLDILVNNAGVSHMPAPLDEISEAD
                     FDRVLAVNVKSVYLTARHVVPRFKAAKAGVILNIASTAAVSPRPRLSWYNASKGWLVT
                     ATKSMAVELAPLGIRVNAINPVAGETPLLKTFMGEDTPEMRARFLATIPIGRFSTPAD
                     IGNAACYLCSDEASMVTGVALEVDGGRVI"
     gene            complement(1692..>2792)
                     /locus_tag="VHZ56_03170"
     CDS             complement(1692..>2792)
                     /locus_tag="VHZ56_03170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009363034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX4296997.1"
                     /translation="FYGGAADKVMGETIPYLDGYTVYTLRQPHGVTGHIIPWNYPMQV
                     LGRSVGGALCMGNAAVLKPAEEACLTAIAFAAIAQEAGLPDGVLNVVPGLGEEAGAAL
                     TSHPDINHISFTGSVAVGRVVQTAAAQNIVPVTLELGGKSPQLVFADADLERALPFLV
                     NAGIQNAGQTCSASSRVLVDRRIHDQVLERMAARYRSLRVGPAIADLDVGPMVSERQK
                     EIVGGFLADLGGAEVAAEGRIEAEAPGGGHYLRPTLLAGVTPDNRLAQDEIFGPVQVV
                     IPFDSEEEAVAIANGTDYGLVAGVWTADGGRQMRMARDIRSGQVFINNYGAGGGVELP
                     FGGVGKSGFGREKGMEALYGFSVLKTVAAWHG"
BASE COUNT          427 a         1016 c          894 g          455 t
ORIGIN      
        1 gcgagcgcgg agtccgcatc ggcgtcggcg gcggcgagca cgttggtcgc ccgcgtctcg
       61 tagccgagga agccgccgac gaaatcgtcg atgccggcga gcgtcgatgc ctcgcgcgtg
      121 ctcacttcat ttccgaggac atcctgtgcc attacccaac gatagccgct gggttcgggg
      181 aagcacaatg ccgcaattcg cgcacgatcg ggccagcgtc cactatgaga tcaccggtag
      241 cgggccgcct ttgctgctgg tggccggcat cgccagcgac agcgccagct ggggtccgct
      301 gctgccgctg ctgtcgaatc ggcggttgat cctcgtcgac aaccgcggca gcgggcagac
      361 cagggtggaa ggacccatcg agctcgacga gatggccgcc gactgtgccg cgctggtcga
      421 ccacctcggg ctgggcaccg tcgatgtcgc cggccattcg ctgggcggct acgtcgccct
      481 cgcgctcgcc gcaaagcatc ctgagcgggt gcgtcgcctc gtgacgatgg cgaccggcgc
      541 gatctcggca cccgcgcgcg tcctgttcca cgacctggcc cggctgtatt tcaccctgcc
      601 gccggaagac tggttccgtc tcctctacca gtggctgttt tcgggtgcgt tcttcgctga
      661 tgaagcgacg gtggcgcgcg ccgccgcggc atcggcgagc tacgcccacc gccagtcgcc
      721 gggagatttc gcccgccagg tcgcggccat cgatcgctat cctggcgtcg acctcgcggc
      781 catcgcctgc ccggtcctcg ccctggtcgc cgagcgtgat ctgctcgcgc gggacgacgc
      841 cgtggcaagc atgcacgcac cgatccgcga ctgccgcttg ctgacgattt cgggcgccgc
      901 ccactcgatc cattgggagc agccgcacgc cgtggcgacg gcgatcgacg agttcctcgg
      961 ctagatcacc cggccgccgt cgacctcgag cgccactccg gtcaccatcg acgcctcgtc
     1021 ggaacagagg tagcacgccg cgttgccgat atcggccggc gtcgagaacc ggccgatggg
     1081 aatggtcgcg aggaaccgcg cccgcatctc cggcgtgtcc tcgcccatga acgtcttgag
     1141 cagcggcgtc tcgcccgcca cgggattgat cgcgttgacc cggatgccga gcggcgccag
     1201 ttcgaccgcc atcgatttgg tggcggtcac cagccagccc ttgctggcgt tgtaccagct
     1261 gagccgcggc cgcggactga cagctgccgt cgaggcgatg ttgagaatca cgccggcttt
     1321 cgccgccttg aaccggggca cgacgtggcg tgccgtgagg tacacggact tgacgttgac
     1381 cgcgagtacg cggtcgaaat cggcctcgct gatctcgtcc agcggcgccg gcatgtggct
     1441 cacgccggcg ttgttgacga gaatatcgag gcctccaaaa gccgcgtagg ccgcctccac
     1501 catcgcggcg acgctcgcgt ccttcgagac gtccacctgg ctcgcagtcg caccgacttc
     1561 gacagccatc gcccgcgctg cgtcaccgtt gatatcggca accatcacgc tcgccccttc
     1621 ggccaggaac ttgcgcacga tgcctgcccc gaaccccgag gcgccgccgg tgacgatcgc
     1681 gcgcttgccg gtcagccgtg ccatgccgcc accgtcttga gcacgctgaa tccgtacaaa
     1741 gcctccatgc ccttctcacg cccgaagccg gacttgccga cgccgccgaa cggcagctcg
     1801 accccgccgc ctgcgccgta attgttgatg aacacctgtc ccgagcggat gtcgcgcgcc
     1861 atccgcatct gccggccgcc atcggccgtc cagacgcccg cgaccagtcc gtagtcggtg
     1921 ccgttggcga tggcgacggc ctcctcctcg ctgtcgaacg ggatgaccac ctgcaccggc
     1981 ccgaaaatct cgtcctgcgc cagccggttg tcgggcgtca cgccggcaag cagcgtcggc
     2041 cgcaaatagt gaccgccccc gggcgcctcc gcctcgatcc gcccttccgc cgcgacctcg
     2101 gcacccccga ggtcggccag gaagccgccg acgatctcct tctgtcgctc cgataccatc
     2161 gggccgacat cgaggtcggc aatcgccggc ccgacgcgca aggaccgata gcgcgccgcc
     2221 atgcgctcga gcacctggtc gtggatccgc cggtccacca ggacccgcga gctcgctgag
     2281 cacgtctggc cggcgttctg gatgccggca ttgacgagga acggcagcgc ccgctcgagg
     2341 tcggcatcgg caaacaccag ctgcggcgac ttgccaccca gctcgagcgt taccggaacg
     2401 atgttctgcg ccgccgccgt ctgcaccacc cggccaaccg ccaccgagcc ggtgaacgag
     2461 atatggttga tatcaggatg gctggtgagc gccgcgccgg cttcctcgcc gagcccgggc
     2521 acgacgttca gcactccgtc gggcaacccc gcctcctggg caatcgccgc aaatgcgatc
     2581 gcggtgaggc aggcttcttc tgccggtttc agcacagcgg cattgcccat gcagagcgcg
     2641 ccgccaacgg agcggccgag cacctgcatt gggtagttcc agggaatgat gtggccggtg
     2701 acgccgtgcg gttgccggag cgtatagacc gtgtagccgt cgagatacgg aatggtctcg
     2761 cccatcacct tgtcggccgc gccgccgtag aa
//
LOCUS       DATAZA010000129         5823 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1521191, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000129 DATAZA010000000
VERSION     DATAZA010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5823
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1521191"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..540
                     /locus_tag="VHZ56_03175"
     CDS             <1..540
                     /locus_tag="VHZ56_03175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018901029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX4296998.1"
                     /translation="FEDGVKDVATGTGAEYPMLTFAISSVQTLAPDNLKDVGFFATPG
                     TDATKNGVTVWEPAGLYIPASNKDHLDAAKKFVAFVVSKAGCDSLNKAGGGTGPYLIQ
                     GCTLPADVPPAVSDLQTYFNAGDTNSPALEFLSPVKGPSLEQITVAVGSGITSPADGA
                     AQYDDDVKKQAQQLGLAGW"
     gene            610..1521
                     /locus_tag="VHZ56_03180"
     CDS             610..1521
                     /locus_tag="VHZ56_03180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007812310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX4296999.1"
                     /translation="MAAVAESAVATPASAKARRAPSPYPHWFYLPAAIVFGVMYLFPT
                     ISSLFFSLTRWNFQSATFIGLDNFRQFFHEQNLYQGLLNTLMYGALTSGLKVVLGLLL
                     GILLTGNVWARGYLRSVVFFPVLVSTVGVGITFTAMMHPTAGVINTTLALVGIPGPGW
                     LTDPHLALFSVALVDVWKGVGLATVIYMAGLVSIPPDYYEAAAIDGATGWQRFWSITL
                     PLVMPATTTVIILSLIGGLRSFDLIWAMTRGGPGFTSDVIASVIYKQYQAGFYGLSTA
                     GNVVLFAVVAAIIVPLSLVLNRRTTEA"
     gene            1518..2348
                     /locus_tag="VHZ56_03185"
     CDS             1518..2348
                     /locus_tag="VHZ56_03185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012652745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX4297000.1"
                     /translation="MTRRPRDYAVGVAAVLISIVVFLVPFAFIVIQALKDVRDSSDRS
                     FALPTSWHLWDNLVEVLSTRDYMLVTAFINSIILTVGSVALLVVLGAMVGFVLQRRPS
                     RWTGIINFFVLAGLIIPPAVVPTIWVLQGLGLFKTLHGLILIEVAYGLSFSVLLFRAF
                     IATVPRELDEAAIIDGAGPLRLFFGIVLPLLRPVVVTLIVTQSVAIFNDFTNPLYYLP
                     GNKNVTLQLTLFNFQSQFNTSYNLLFMNILLITIPPLVVYIFFSRQIVAGLTSGAVKG
                     "
     gene            2441..4201
                     /locus_tag="VHZ56_03190"
     CDS             2441..4201
                     /locus_tag="VHZ56_03190"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HEX4297001.1"
                     /translation="MDYRFGALSDASGAFFRLWAPSQPEVGLLIEGRDALPMQRTDDG
                     IWELRVEAIQPGTRYRFAAAGREFPDPASRQQDGDAEGWSILRAPSNRAPRSGPLRPW
                     HESILCEMHIGTASPEGTFEGLMHRLEHFRDAGYTGIEIMPVNEFPGQRGWGYDGVLI
                     FAPHTAYGTPEALRALVDRAHELGLCVVLDVVYNHFGEVANAIPGYAPEWFDNDIKTP
                     WGPAIDFRQPLVRQFYYENACWWIEEYDVDGLRFDAIHEIATEARDQFLGELARAIRS
                     VKPDAQLIIENVKNQMHWLTRDAGSKPVDFTAQWNDDFHHVLQFLVTGEKTGGYEDDT
                     RDPVADLEKSLADGFVHDGDAGPDSDGRTRNEPASQLPMEAFIGYLQNHDQIGNRPDN
                     KRIVARVDADRLDFGHFVTLLSPQIPLFFMGEEAHLRCPFKFFFDLPEPQRSTLRDNR
                     YWQMEHVFHTRVEPGSLPDPQDPGTFAASKLDWNAYARNEHHEALDRFKALTALRRDL
                     VWPLTAGRYLASSSARQGDAIIVTWRYEAGTLNMLLNPTGAEATASLSLSEPAASTGK
                     FEFENGRVRIGPWSALVWRS"
     gene            complement(4252..4464)
                     /locus_tag="VHZ56_03195"
     CDS             complement(4252..4464)
                     /locus_tag="VHZ56_03195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2934 domain-containing protein"
                     /protein_id="HEX4297002.1"
                     /translation="MPIRDGDPWGDPEFEQAVRETAYFLWEQDGRPFGREQEYWYRAL
                     ERQLRERNADHVIGREPGRSAAGTEH"
     gene            4577..>5823
                     /locus_tag="VHZ56_03200"
     CDS             4577..>5823
                     /locus_tag="VHZ56_03200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018457192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HWE histidine kinase domain-containing protein"
                     /protein_id="HEX4297003.1"
                     /translation="MNDLPPESPRRPPAFLEGGGEMGELIRGRDWSATALGPPESWPQ
                     SLRVTVRLMLNSRHPMFIWWGPDLIQLYNDGYRQTMGLEMHPSALGAKGRDSWASIWP
                     IIGPQIELVMAGKGSTWNVEQMVPIPRHGHVEEVWWTYGYSPIDLDDRVGGVLVVCTD
                     VTKQHLERERFRLQTERLAQMFEEAPGFIAVLGGPTHQFELVNASYRRLIGSRDVIGR
                     PIRDALPDLTGQGFYELLDQVYATGKTYVGRRAPVALQASAVAPPVDTYLDFVYQPIV
                     DDRGQVTGIFVQGQDVTEHVAVEDHLRLINSELRHRVKNTLAMVGAVATQTFRNSPPE
                     TALPAFTARLAAFAKAHDALTEGANTVGQLADIIGNAVEPHVADKRLIAISGPPIVVG
                     AKPAVAIALAMHEMATNAVKYGAL"
BASE COUNT          919 a         2078 c         1817 g         1009 t
ORIGIN      
        1 ttcgaggacg gcgtcaagga cgtcgccacc ggcaccggcg ccgagtatcc gatgctgacc
       61 ttcgcgatca gcagcgtgca gaccctggcc cccgacaatc tcaaggacgt cggcttcttt
      121 gcgacccccg gcaccgacgc gaccaagaac ggcgtcacgg tatgggagcc ggccggcctc
      181 tacatcccgg ccagcaacaa ggaccatctc gacgccgcca agaagttcgt ggccttcgtc
      241 gtcagcaagg ccggctgcga ctcgctcaac aaggcgggcg gcggcactgg cccctacctg
      301 atccagggct gcaccctgcc ggccgacgtg ccgccggcgg tgtcggacct gcagacctac
      361 ttcaacgccg gtgacaccaa ctccccggcg ctcgagttcc tgtcgccggt gaaggggccc
      421 tcgctcgagc agatcaccgt cgcggtcggc tcgggcatca cctcgccggc agacggcgcg
      481 gcgcagtacg acgacgacgt caagaagcag gcgcagcagc tgggcctcgc cggctggtga
      541 actgatggct gattgatctt ggctgcgccc ggcgcgatgc tgggcgcagt cgtcgtggag
      601 gagagatcga tggctgctgt ggcggagagc gccgtcgcga cgccggccag cgccaaagcc
      661 cgccgggcgc cctcgcctta tccgcactgg ttctacctgc cggcggcgat cgtcttcggg
      721 gtgatgtatc tcttccccac gatctcctcg ctgttcttca gcctgacccg ctggaacttc
      781 cagagcgcga cgttcatcgg gctcgataat ttccggcagt tcttccatga gcagaacctc
      841 taccagggtc tgctcaatac cctcatgtac ggcgcgttga cctcaggcct caaggtggtg
      901 ctcggcctgc tgctggggat cctgctcacc ggcaacgtct gggcgcgggg ctatttgcga
      961 agcgtggtgt tctttccggt gctggtctcg accgtcggcg tcggcatcac cttcacggcg
     1021 atgatgcatc cgaccgccgg cgtcatcaac accacgctgg cgctcgtcgg cattcccggc
     1081 ccgggctggc tgaccgatcc gcacctggcg ctgttttcgg tggcgctggt cgacgtctgg
     1141 aagggcgtcg gcctcgcgac ggtgatctac atggccgggc tggtctcgat cccgccggac
     1201 tattacgagg cggccgcgat cgatggcgcc accggctggc agcggttctg gagcatcacc
     1261 ctgccgctgg tgatgccggc gaccaccacg gtgatcatcc tcagcctcat cggcgggctg
     1321 cgctcgttcg acctgatctg ggcaatgacg cgcggcggcc cgggcttcac ctcggacgtc
     1381 atcgcctcgg tgatctacaa gcaataccag gccggcttct acggcctgtc gaccgccggc
     1441 aacgtcgtgc tgttcgcggt cgtcgcggcg atcatcgtgc cgctgtcgct ggtcctcaac
     1501 cggcggacga cggaagcatg acccggcgcc cgcgggacta cgccgtcggc gtcgcagcgg
     1561 tgctgatctc gatcgtcgtg ttcctcgtgc ccttcgcgtt catcgtcatc caggcactga
     1621 aggacgtgcg cgacagctcc gaccgcagct tcgcgctgcc gaccagctgg cacctgtggg
     1681 acaatctcgt cgaggtgctg tcgacccgtg actacatgct ggtgaccgcc ttcatcaatt
     1741 cgatcatcct gacggtcggc agcgtcgccc tgctcgtcgt gctcggcgcg atggtggggt
     1801 tcgtcctgca gcggcggcca tcgcgctgga ccggcatcat caatttcttc gtcctcgccg
     1861 gcctgatcat cccgccggcc gtggtgccga cgatctgggt gctgcagggg ctcgggctgt
     1921 tcaagacgct gcacggcttg atcctcatcg aagtcgccta cggcctcagc ttttcggtgc
     1981 tgctgttccg cgccttcatc gccaccgtgc cgcgcgagct cgacgaggcg gccatcatcg
     2041 acggcgccgg tccgctgcgg ctgtttttcg gcatcgtgct gccgctgctg cggccagtgg
     2101 tggtgacgct gatcgtcacc cagtcggtgg cgatcttcaa cgactttacc aacccgctct
     2161 attatctgcc gggcaacaag aacgtcactc tgcagctgac cctgttcaat ttccagagcc
     2221 agttcaacac ctcctacaat ctgctgttca tgaacatcct gctgatcacc atcccgccgc
     2281 tggtcgtcta catcttcttc agccgccaga tcgtcgccgg cctgacgtcc ggtgccgtga
     2341 agggataggc cgcggctgtc cacggctcac ctttccaccg ggaaccgggg cgcgaaatcg
     2401 gcgttcaacc ccagcttttt tgcggatggg tgagtggacg atggactaca gattcggcgc
     2461 gctttccgat gcatcggggg cgtttttccg gctttgggcg ccgtcgcagc ccgaggtcgg
     2521 cctgcttatc gaaggccgcg acgcgctgcc gatgcaacgg accgatgacg gcatctggga
     2581 acttcgcgtc gaggccatcc agcccggcac ccgctaccgc ttcgccgctg ccggtcgcga
     2641 atttcccgat ccggcgtccc gccagcagga cggcgacgcc gaaggctgga gcatcctgcg
     2701 cgcgccgtcc aatcgagcgc cgcgatccgg cccgctccgc ccctggcacg aatccatcct
     2761 ctgcgagatg cacatcggaa ccgcttcgcc cgagggcacg ttcgaggggc tgatgcatcg
     2821 gctcgaacac ttccgcgacg ccggctacac cggcatcgag atcatgccgg tcaatgagtt
     2881 ccccggccag cgcggctggg gctatgacgg ggtgctgatc tttgcgccgc ataccgccta
     2941 tggcacgccg gaggcgctgc gcgcgctggt cgaccgcgcc cacgagctcg gcctgtgcgt
     3001 cgtgctcgac gtcgtctaca accatttcgg cgaggtcgcg aacgccattc caggctacgc
     3061 gccggagtgg ttcgataacg acatcaagac gccctgggga ccggcgatcg attttcgcca
     3121 gccgctggtc cgccagttct actacgagaa cgcctgctgg tggatcgagg aatacgatgt
     3181 cgacggcctg cgcttcgatg ccatccacga gatcgccacc gaggcgcgcg accagttcct
     3241 cggcgagctc gcccgcgcca tccgctcggt caagcccgat gcccagctga tcatcgagaa
     3301 cgtcaagaac cagatgcact ggctgacgcg cgacgcaggc agtaagccgg tcgacttcac
     3361 cgcgcagtgg aacgacgact tccaccacgt gctgcagttc ctcgtcaccg gcgagaagac
     3421 cggcggctac gaggacgaca cccgcgaccc cgtggcggac ctcgagaaat cgctcgccga
     3481 cggcttcgtg cacgacggcg atgccggccc cgacagcgac gggcgcaccc gcaacgagcc
     3541 ggccagccag ctgccgatgg aagccttcat cggctacctg cagaaccacg accagatcgg
     3601 caaccgcccc gacaacaagc ggatcgtcgc ccgcgtcgac gccgatcgcc tcgacttcgg
     3661 gcatttcgtc accctgctgt cgccgcagat cccgctgttc ttcatgggcg aggaggcgca
     3721 cctgcgctgc cccttcaagt tcttcttcga cctgccggag ccgcagcgct cgacgctccg
     3781 cgacaaccgc tactggcaga tggagcatgt ctttcatacc cgggtggagc cgggcagcct
     3841 gcccgacccg caggatcccg gcactttcgc cgcctcgaag cttgactgga acgcctacgc
     3901 gcggaacgaa caccatgagg cgctggatcg cttcaaggcg ctgaccgcgc tccgccgcga
     3961 ccttgtctgg ccgctgacgg cagggcggta cctcgcctcg tcgtcggcgc gacagggcga
     4021 tgcgatcatc gtcacctggc gctacgaggc gggaaccctg aacatgctgc tcaatccgac
     4081 cggcgccgag gccacggcgt cactgtcgct gagcgagccg gccgcctcga ccggaaagtt
     4141 cgaattcgag aatgggcggg taaggatcgg gccctggtcg gcgctggtct ggcgcagctg
     4201 aggcttgtgg gaacgcagcg gccggcaccg ctgcccggcg aaggctgccc ctcagtgctc
     4261 cgtcccggct gcggaccgcc ccggctcccg gccgatgaca tggtcggcat tgcgctcgcg
     4321 cagctgccgc tcgagcgccc ggtaccagta ttcctgctcg cggccgaacg ggcgcccgtc
     4381 ctgctcccac agaaaatagg cggtctcgcg gaccgcctgc tcgaattctg ggtctcccca
     4441 gggatcaccg tcccgaatgg gcatctgaag cctcgtcttg tcgacggaca aaactccgca
     4501 gcaggcgccg ggttccttgc gcctcggcgt gtcggagtga gttgaaccag cccctgcggc
     4561 ctgctctata agccgaatga acgacctgcc tcccgagagc ccccgccggc cgcctgcctt
     4621 cctcgagggc ggcggcgaga tgggcgagct catccgtggc cgcgactggt ccgcgactgc
     4681 cctggggccg ccggaaagct ggccgcagag cctgcgggtc acggtgcgcc tcatgctcaa
     4741 ttcccggcac ccgatgttca tctggtgggg gcccgatctc atccagctct acaacgacgg
     4801 ctaccgccag acgatgggcc tcgaaatgca cccgtccgcc ctcggcgcga aaggccgcga
     4861 ctcttgggcc tccatctggc cgatcatcgg gccgcagatc gagctcgtga tggccggcaa
     4921 aggctcgact tggaacgtcg agcagatggt ccccatccct cgccacggcc acgtcgagga
     4981 ggtctggtgg acctacggct attccccgat cgatctcgac gaccgcgtcg gcggcgtgct
     5041 cgtcgtctgc accgacgtga ccaagcagca cctcgagcgc gagcgcttcc ggctgcagac
     5101 cgagcggctg gcgcaaatgt tcgaggaggc ccccggcttc atcgccgtgc ttggcggtcc
     5161 cacccaccag ttcgagctgg tcaacgcgtc ctaccggcgg ctcatcggca gccgcgacgt
     5221 aatcggacga cccatccgcg acgccctccc cgatctcacc ggccagggat tctacgagct
     5281 cctcgaccag gtctatgcca ccggcaagac ctacgtggga cggcgcgccc ccgtcgccct
     5341 gcaggcgagc gcggtcgctc cgccggtcga cacctacctg gacttcgtct accagccgat
     5401 tgtcgatgac cgcgggcagg tcaccggcat cttcgtgcag ggccaggacg tgaccgagca
     5461 cgtcgccgtc gaggaccatt tgcggctcat caacagcgag ctgcgccacc gggtgaagaa
     5521 caccctggcc atggtcggcg ccgtggccac gcagaccttc cgcaattccc cgccggagac
     5581 ggcgctcccg gccttcaccg cccgcctcgc cgccttcgcc aaggcgcacg atgcgctgac
     5641 cgagggcgcc aacaccgtcg gacagctggc cgacatcatc ggcaacgccg tcgaaccgca
     5701 cgtcgccgac aagcggctga tcgccatctc cgggccgccg atcgtcgtcg gagccaagcc
     5761 cgccgtcgcc atcgccctcg ccatgcacga gatggccacc aacgccgtca agtacggtgc
     5821 cct
//
LOCUS       DATAZA010000130         1614 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3843187, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000130 DATAZA010000000
VERSION     DATAZA010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3843187"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..92)
                     /locus_tag="VHZ56_03205"
     CDS             complement(<1..92)
                     /locus_tag="VHZ56_03205"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003602126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HEX4297004.1"
                     /translation="MSEILFYHLEAQPLERALPLLLEKTLERGWR"
     gene            complement(89..1591)
                     /locus_tag="VHZ56_03210"
     CDS             complement(89..1591)
                     /locus_tag="VHZ56_03210"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015915530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEX4297005.1"
                     /translation="MPQTITIHTAPLPLIPAGILVLYVAEGAAPRGPSGAAWDATGLD
                     FAEIAAAAGFKGKQGQLLDIAAPRGVDARRLFVLGAGRVDPDRPATAAAWTDRGGSLA
                     AKLMAANAETVSVLLDGHEAMPAAVAELAAGLRLRHYRFDKYKSAKPDDATPSALAVT
                     LHVADPAAVDAAIARRMAAVEGTLLARDLINEPANVLGTVEFAARTEALRPLGVEVEM
                     LGEEELRALGMNSMLAVAQGSVRPPRLVVMRWNGGSAGTAPLAFVGKGVVFDTGGISI
                     KGAAGMEDMKGDMGGAAAVVGLMHALATRKAKINVVGVIGLVENMPSGTAMRPGDIVR
                     AMSGTTIEIVNTDAEGRLVLADALWYTQEKYHPQAIVDLATLTGAIGVALGQDHAGLF
                     SNNDELALKLATAGLATGEKLWRLPLGPAYEKLIESRFADIKNVGGRSAGAITAAQFL
                     AKFIGNLPWAHLDIAAVALGPPASETNASWAPGFGVALLDRFVRDGYEEA"
BASE COUNT          243 a          507 c          615 g          249 t
ORIGIN      
        1 cgccagccac gctcgagggt cttttcgagc agcagcggca aggcccgctc cagcggctgg
       61 gcctcgaggt gatagaacag gatttcgctc atgcctcttc gtagccgtcg cgcacgaagc
      121 gatcgagcaa agcgacgccg aagccgggcg cccaggatgc gttggtttcg ctcgctggcg
      181 ggccgagcgc gacagcggcg atatcgaggt gcgcccacgg cagattgccg atgaatttgg
      241 cgaggaactg tgcggcggtg atggcaccgg cggagcgccc gccgacgttc ttgatgtcgg
      301 caaaccggct ctcgatcagc ttctcgtagg ccgggccgag cggcaggcgc cagagctttt
      361 cgccggtcgc gaggccggcg gtcgcaagct tcagggccag ctcgtcattg ttcgagaaca
      421 ggccggcgtg atcctggccg agcgcgacgc cgatggcgcc ggtgagggtg gcgagatcga
      481 cgatcgcctg cgggtggtat ttctcctgcg tgtaccagag ggcgtcggcg agcacgaggc
      541 ggccttcggc gtcggtgttg acgatctcga tggtagtgcc ggacatggcg cggacgatat
      601 cgccggggcg catggcggtg ccgctcggca tgttctcgac gagtccgatg acgccgacga
      661 cgttgatttt cgccttgcgg gtggcgagtg cgtgcatgag gccgaccacg gcggcggcgc
      721 cacccatgtc gcctttcatg tcctccatgc cggcggcgcc cttgatcgag atgccgccgg
      781 tgtcgaagac gacgcctttg ccgacaaaag ccagcggcgc ggtaccggcg ctgccgccgt
      841 tccagcgcat gacgacgagc cgcggcggcc ggacggagcc ctgtgccacc gccagcatcg
      901 agttcatgcc gagggcgcgc aattcttcct cgccgagcat ctcgacctcg acgccgagcg
      961 gtcgcaacgc ctccgtgcgg gcggcgaact cgacggtgcc cagcacgttg gcgggttcgt
     1021 tgatgaggtc gcgggcgagc agcgtgccct cgaccgcagc catgcgccgg gcgatcgcgg
     1081 catcgacggc ggccggatcg gcgacgtgga gggtgacggc cagcgccgat ggcgtcgcat
     1141 cgtcgggctt ggcacttttg tatttgtcga agcggtagtg gcggaggcgc aggcccgcgg
     1201 ccagttcggc aacagcggcc ggcatggcct catggccgtc gagcaggacg gagacggttt
     1261 cggcgttggc agccatcagc ttggcggcga gcgagccacc gcggtcggtc caggcggcgg
     1321 ccgtggccgg acgatcgggg tcgacgcgac cggcgccgag cacgaacagc cggcgggcgt
     1381 cgacgccgcg gggcgcggcg atatccagca actggccctg cttgcccttg aatccggcgg
     1441 cggcggcgat ctcggcaaaa tcgaggccag tggcgtccca agccgcgccg gaggggccgc
     1501 gcggcgcagc gccttcggcg acatagagga cgaggatgcc ggccggaata agcggcagcg
     1561 gggcggtatg gatggtgatc gtctggggca tggccgcgtc tggctggagg gacg
//
LOCUS       DATAZA010000131         8673 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1754443, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000131 DATAZA010000000
VERSION     DATAZA010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 8673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8673
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1754443"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..707
                     /locus_tag="VHZ56_03215"
     CDS             <1..707
                     /locus_tag="VHZ56_03215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297006.1"
                     /translation="RRRSFSATCGWLCKAREATTSDWSWHQISAIPDLQIQGLVLVVS
                     SNAEDPMLRRHFIIGAVGFSAFLPASAPAEDASAGPVITLRRANGTAFPVDATHIERI
                     RAWAPGDELPAGTTRVDWLALDYATEDLGTVVKAVLSIVPSFKSLRSPIGGAVWFDAR
                     RAIGPLPVLDKQVDPQKVRSVVRIGTHLQYLASTPDEVVACIRSAGGYPLVPGVAAAT
                     REGNSASSTPLTIWTY"
     gene            complement(1240..1329)
                     /locus_tag="VHZ56_03220"
     tRNA            complement(1240..1329)
                     /locus_tag="VHZ56_03220"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1293..1295),aa:Ser,seq:gga)
     gene            1566..1889
                     /locus_tag="VHZ56_03225"
     CDS             1566..1889
                     /locus_tag="VHZ56_03225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297007.1"
                     /translation="MRLLLRIVGTLLIACAVILLIIDGTKSLGSNAIVLTPLGDFWTQ
                     INAQSLETVKGFFATRLFGPLLETVVSALLGFPGWAVIGVPGILLAWAGRSRRERVFL
                     RQDQI"
     gene            complement(1903..3699)
                     /locus_tag="VHZ56_03230"
     CDS             complement(1903..3699)
                     /locus_tag="VHZ56_03230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297008.1"
                     /translation="MNNRVGVVPLLVMWVLVAAAFTARALATAHGTPLILDTDDAMRL
                     NMVHDFLAGQGWFDLVQHRLNTPYGGLIHWSRLIDLPEAIVLGILRPLFGVAADTVAA
                     YVWPLLLLLPLLWLSAKLSLRLGGREALLPGLFLPAFSVISLAEFVPGRFDHHSAQIL
                     LTLAMLLCTIAALERPRFAIGAGAAAAIALAIGIEGLPMAIAAALVFGCAWVAAPRHA
                     AAMRDFGLSFGLGSALALAQGVPPDRWLLPAFDAISIVYAGAALLAALAFCLLSVVPL
                     RSWPARLVAGAIAGALIAAIVVGLYPAILKGPYGMLDPWLIANWIDHISEAEPWLASL
                     LGEPVYPISVAAAPLLALAVAVWNIVRNRQDRAAWLIYAGYLVVAGAVMLFEIRGARM
                     ATPLAVPGCAALIASAWRRQLVRRGLVPAFALVASWIASAGVAVGLLATLVVLAFPDY
                     AAATEDKYLAAREACLMPSAFTSLAALPPARIMAPIDLGSHLLLFTPHSVVAAPYHRN
                     QEAVLDAFHFFNEPIGEAHAILDARGITLVVICPAMKEIRGLVDHAPDSFVSLFAEGR
                     LPSWLVEQPMPGTPLRVYAVAPRTHQPPPGTT"
     gene            3834..4100
                     /locus_tag="VHZ56_03235"
     CDS             3834..4100
                     /locus_tag="VHZ56_03235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297009.1"
                     /translation="MIAILLYLIGLIAAVVTAVMVGVDGPAMYQALLDAYNSGNQAIP
                     PALGKIAADHAWALEPFLGGLLLMGFARIMMLLGSIRHGLKGPA"
     gene            complement(4171..4806)
                     /locus_tag="VHZ56_03240"
     CDS             complement(4171..4806)
                     /locus_tag="VHZ56_03240"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014133020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX4297010.1"
                     /translation="MAILIGDAAPDFEAETSQGHIHFYDYIDGKWAVLFSHPKNFTPV
                     CTTELGYTAKLKPEFDKRGVVVLGLSVDELKNHEGWSKDIEETQGQKLNFPLIADPTR
                     EIATKYEMIHPNADNSLTVRSVFVIGPDKKVKLKIEYPASTGRNFDEVLRVIDSLQLT
                     AKYSVATPVNWKPGEDVIIASSLNDEAAKQKFPNGWKAPKPYIRIVPQPHA"
     gene            complement(4973..5155)
                     /locus_tag="VHZ56_03245"
     CDS             complement(4973..5155)
                     /locus_tag="VHZ56_03245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297011.1"
                     /translation="MSPIFHIFTDGNAALMSSVVAFVSFFLIGRLARAGQAVAFAFAF
                     TPLLLFFVIEAAVSLA"
     gene            5401..5664
                     /locus_tag="VHZ56_03250"
     CDS             5401..5664
                     /locus_tag="VHZ56_03250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297012.1"
                     /translation="MKKQLALIAAFVIAGGIGAAVVPGFAQDTSSSAMDSSMMMSSSM
                     DCSSMSGMDSSSMMSSSMASSDMMSSSCPPMDSSMMMSSSSAM"
     gene            complement(5694..6197)
                     /locus_tag="VHZ56_03255"
     CDS             complement(5694..6197)
                     /locus_tag="VHZ56_03255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007875738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CreA family protein"
                     /protein_id="HEX4297013.1"
                     /translation="MLTRFARAAGLVLVVLLLAACGKDNTQSVAKISVDWTGNDIAID
                     AVEDPQVKGVVCHLAYFNRSLIDRLQQGNWFEDPSYSAIDCAASGPVTVGTIAMGAGG
                     EEIFKEQRSLIWKSLRITRVYDQANNTLIYLAHARELQLGSGKMSLSAVPLNGLNVTW
                     TNGAPKG"
     gene            complement(6291..7091)
                     /locus_tag="VHZ56_03260"
     CDS             complement(6291..7091)
                     /locus_tag="VHZ56_03260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX4297014.1"
                     /translation="MHRSRRRLADFPFWLLAIALLGVLTLWAIVANEDYARIFGALVG
                     GMATTLWVTLVAFALAALLGLGLALLRTSGQPVLVQLATFYTELIRGIPILVFLFYTA
                     FVGAPATIVAANWLTHPLQLLGWMPVLTVRNFDLTWRAIIALTICYSAFLSEVFRAGI
                     EAVPAGQLEAARALGLHRSQIARHIVAPQAFRIILPPLGNDFVSMIKDSALVSSLGVQ
                     DITQLGKVYSASTFKFFETYNVVAFLYLTMTISLSLVVRYIERRLRRY"
     gene            complement(7139..7954)
                     /locus_tag="VHZ56_03265"
     CDS             complement(7139..7954)
                     /locus_tag="VHZ56_03265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008834543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX4297015.1"
                     /translation="MRSAVSTLVATVFAALMVGSAAAATALPDLKGRVIQAVTENAYT
                     PLNFADPKTGQGIGWEYDATNEIAKRLDAKVNWNIMSWDPMIEAVHEGQYDIAMDGIS
                     ITDERKKQVDFSDPYMDNKEYMLVRTDEKRIAQPGDLVTNTDLLVGAQSGTSGFYASE
                     DLLNPDLKDGDKPDDSRIKLFDTFGASVQALKSGDVDMVLMDQASVNGYIAADPGVFK
                     TIGDPVGSDQFGFIFKPGSDLVAPVNAALASMKADGTIDALNRKWFYEYSAAK"
     gene            complement(8062..8472)
                     /locus_tag="VHZ56_03270"
     CDS             complement(8062..8472)
                     /locus_tag="VHZ56_03270"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX4297016.1"
                     /translation="MPDSWLRRDWIAPGMALIEQGGRTGQLYVLKQGELEVVRDGRHV
                     STIRTPGAVVGEMSVLLDLPQTATVRAVSEVDYFVVDNALEVLRAHPDWLLQIARLLA
                     QRVNATTAALTRDRAEEEMVLPQHFMSSWADPTV"
BASE COUNT         1544 a         2629 c         3118 g         1382 t
ORIGIN      
        1 gcaggcgccg atcattctca gcgacatgtg gctggctttg caaagctcgt gaagccacaa
       61 ccagcgactg gagctggcac caaatatcgg ccattccaga tttgcaaatt cagggcctag
      121 tattggtcgt ctcgtccaac gcggaggatc cgatgcttcg ccggcacttc atcatcggcg
      181 ctgtcggctt cagcgccttc ctccctgcct cggcgcccgc cgaggatgca tcggcaggtc
      241 ccgttattac gctcagacgg gccaatggca cggcattccc ggtcgacgcg acgcatatcg
      301 agcggatccg tgcctgggcg cccggcgacg agctgccagc cggcaccacc cgcgttgact
      361 ggttggcgct cgactatgca accgaggacc tgggcacggt cgtcaaagcg gtgctgtcga
      421 tcgttccaag cttcaagtct ctcaggtcgc ccatcggcgg ggccgtgtgg ttcgacgccc
      481 ggcgggctat cgggccgctg ccggtcctcg acaagcaggt cgacccacag aaggtacggt
      541 ccgtggttcg gatcggcact cacctccagt atctcgccag cacgccggac gaagtggtgg
      601 cgtgcatccg ctcagctggt ggctacccct tggtgccagg cgtggccgcg gcaacccgag
      661 aggggaacag cgccagctcg acgccgctca cgatctggac gtactgaccg cgcgccgacc
      721 aggagtcggc ggcaaggcac cgggacttgg tcgagagcag gcgagccaac acgcttgacg
      781 tcagcgattg cccatcattc ttgatctcag gatgccgtga tcagccggcc acgtctctcc
      841 ccgtggtacc gcttctccgg ctagacttac cccacggctc gtcagcacgc agcggatcga
      901 ggtccctgct ggggtgtcga gccagagccc agggacgcga tgcgccaggc gttggcagcc
      961 gcgctgaagg gcggcccgct gcgcatcagc aaagccctgc aggccgagtt tcgaatgcgc
     1021 ggcggccagt tcagcgcctg agaaacgcca ttccagctgg cagatccgac gattaaagcg
     1081 gaatccccgc aattcccgag aaccgacatg ggccgtctca tctactcgcc gctgctgctg
     1141 ttcatcgagg acttcggccg caacctcata acgctaactt gctgatagtt cgaatttact
     1201 aatcctgctc gtatctccct gcagaatcag tagactagct ggcggagaga aagggattcg
     1261 aacccttgag acggttaccc gcctacacac tttccaggcg tgcgccttcg accactcggc
     1321 catctctccg cgctgggcgg gcgccggtgg gccggcgact gcgtcgcctt cgccggagac
     1381 cggcgggagg ggcggaacac cctccgaagg cgggcgcact atactcatcg gcggatcagc
     1441 cgcaagggac gaggcggacc cctgcgaggc gggcggaatg acgccttgtg caggcaaagc
     1501 gggccgtgca acaagggcgg catccggcgg acggtggggc tttccaccag tccggagatg
     1561 gaagaatgcg gctcctcctc aggatcgtgg gcacattgct gatcgcgtgc gcggtgatcc
     1621 ttttgatcat cgacggcacc aagtcgctgg gcagcaacgc catcgtgctg acgccgctgg
     1681 gcgatttctg gacccagatc aacgcccaaa gccttgaaac cgtgaaggga ttcttcgcca
     1741 cgaggctgtt cgggccgctg ctcgaaacgg tggtttcggc cctgctgggg ttccccggct
     1801 gggcggtgat cggggtgccg ggcatcctgc tggcatgggc cggacggtcg cgccgcgagc
     1861 gggtgttcct gcggcaggat cagatctagc catgaacctc tgtcaggtcg tgccgggcgg
     1921 cggctggtgg gtccgcggcg cgacggcgta gacccgcagc ggcgttccgg gcatgggctg
     1981 ctcgacgagc catgacggca ggcggccctc ggcgaacagc gacacaaacg aatccggcgc
     2041 gtgatcgacg aggccgcgga tttccttcat ggcggggcag atcacgacga gcgtgatgcc
     2101 gcgggcatcg aggatggcgt gggcctcccc gatcggctcg ttgaagaaat ggaacgcgtc
     2161 gagcacggct tcctggttgc gatgataggg ggccgccacc accgaatgcg gggtgaagag
     2221 cagcagatgg ctgccgaggt cgatcggcgc catgatccgg gccggcggca gggccgcgag
     2281 ggaagtgaag gcggacggca tcaggcaggc ctcgcgcgcc gcgaggtact tgtcctcggt
     2341 ggcggcggcg tagtcgggga aagccagcac gacgagggtg gccagcaggc cgacggcgac
     2401 accggcggag gcgatccacg aggcgacgag agcgaacgcc ggcacgaggc cgcgccggac
     2461 caactgccgg cgccaggccg aggcgatgag cgccgcacag ccgggcacgg cgagcggcgt
     2521 cgccatgcgg gcaccgcgga tttcgaacag catgacggcg ccggcgacta cgaggtagcc
     2581 ggcatagatc agccaggcgg cgcggtcctg gcgattgcga acgatgttcc agacggcgac
     2641 ggcaagcgcc agcagcggtg cggcggcgac gctgatggga tagaccggct cgcccagcag
     2701 gctggccagc cacggctcgg cctcggagat gtggtcgatc cagttggcga tgagccaggg
     2761 atcgagcatg ccgtaggggc ccttgaggat cgccggatag aggccgacga cgatggccgc
     2821 gatcagcgcg ccggcgatgg caccggcgac cagccgcgcc ggccagctgc ggagcgggac
     2881 gaccgacagc aggcagaagg ccaaggcggc cagcagggcg gcgccggcat agacgatgga
     2941 gatggcgtcg aaggccggca gcagccagcg atcgggcggc acgccctgcg ccaaggccag
     3001 cgccgagccc aggccgaagc tcaggccgaa atcgcgcatc gccgcggcgt ggcggggcgc
     3061 cgccacccag gcgcagccga agaccagcgc ggcggcgatt gccatcggca ggccctcgat
     3121 gccgatggcg agggcaatgg ccgcggctgc cccggcgccg atggcgaagc gcggccgctc
     3181 gagcgccgcg atagtgcaca agagcatggc gagggtcagc aggatctgcg ccgaatgatg
     3241 atcgaagcgg ccggggacga attcggcgag gctgatcacc gagaaggccg gcaggaagag
     3301 gcccggcagc agcgcctcgc ggccgcccag ccgcagtgag agcttggcgc tgagccagag
     3361 caggggaagc agcagcagca agggccagac ataggcggcg acggtgtcgg cggcgacccc
     3421 gaagaggggc cgcaggatgc cgaggacgat cgcctcgggc aggtcgatca ggcgcgacca
     3481 gtggatgagg ccgccatagg gcgtgttcag ccgatgctgc accaggtcga accagccctg
     3541 cccggcgaga aaatcgtgca ccatgttgag gcgcatggcg tcgtcggtgt cgaggatcag
     3601 cggcgtgccg tgggcggtcg ccaaggcgcg cgcggtgaac gcggcggcga ccagcaccca
     3661 catgacgagc agcggaacga cccctaccct gttgttcatg gccagcgccc gcggctcctg
     3721 ctcggtcccg gggatagcgc tttgccgtta acatcggctg aaaccggggc cggggccgat
     3781 tgacgccgcg gcggggcgcc cgtctagtgg cggcgagctt tcagggggcc aacatgattg
     3841 cgatcctgct ctatctcatc ggcctgatcg cggcggtggt gaccgccgtg atggtcggcg
     3901 tcgacgggcc ggcgatgtac caggcgctgc tcgatgccta caattccggc aaccaggcga
     3961 tcccgccggc gctgggcaag atcgcggcgg accatgcctg ggcactggag ccgttcctgg
     4021 gcgggctgct gctgatgggc tttgcccgga tcatgatgct gctcggctcg atccgccatg
     4081 gcctcaaggg gcccgcctga cacaagaaaa tgggccgccc gaaaaacgag cggcccagtc
     4141 atcagggaga cgtccaggag gtcgaccgga tcaggcgtgc ggctggggca cgatccggat
     4201 ataaggcttg ggagccttcc agccattggg aaatttctgc ttggccgcct cgtcgttgag
     4261 cgaggaggca atgatcacgt cttcgcccgg cttccagttc accggggtgg cgaccgaata
     4321 tttggcggtc agctgcaggc tgtcgatgac ccgcaggacc tcgtcgaagt tgcggccggt
     4381 cgaggcggga tactcgatct tgagcttgac cttcttgtcc gggccgatga cgaagaccga
     4441 ccgaacggtc agcgagttgt cggcgtttgg atggatcatc tcgtatttgg tcgcgatctc
     4501 gcgagtggga tcggcgatca gcgggaagtt gagcttctgg ccctgcgtct cctcgatgtc
     4561 cttgctccag ccctcgtggt tcttcagctc gtcgaccgac aggccgagca cgacgacgcc
     4621 gcgcttgtcg aattcgggct tgagcttggc ggtgtagccg agctcggtgg tgcagaccgg
     4681 cgtgaaattc ttcgggtgcg agaacagcac cgcccacttg ccgtcgatgt agtcgtagaa
     4741 atggatgtgg ccctggctgg tctccgcctc gaaatccgga gccgcatcgc cgatcagaat
     4801 tgccatttga gtggtccttc caggcgccga tcgcgcagcg ccgttgcgta gccccgaata
     4861 tcggccgaag cgccgcagag cggcagggcg ggcgaggaaa tttctttgtg ttttcaggac
     4921 agcggcggcc aagccattcc gtggccggga caatcgacgc caagctgcgg tttcaagcga
     4981 ggctgactgc ggcctcgatg acgaagaaca ggagcagcgg cgtgaaggcg aacgcaaacg
     5041 ccacggcctg gccggcccgc gccagccggc cgatgaggaa gaaactcaca aaggcgacga
     5101 cgctcgacat aagcgccgca ttgccgtcgg tgaaaatgtg aaagatcggg gacatcccgg
     5161 ctctccgcct cgaagcgaga atggagcgcc gtgccggtta cagccgggtg tgcgcgacgt
     5221 gcggcagttg gcacaaattg ttctcgttgg gcactggcaa tggaggctcg ggaacgtcgc
     5281 gcgctatggc cggttgcatc aatccggcgt tccgggttcg tgagagcaag tgattgggca
     5341 aagaacggga gccgtcatta ttgctttgcg agtagaacgc gcaacctcca aggagctaaa
     5401 atgaagaaac aacttgccct gattgcagcc ttcgtgattg ccggcggtat cggcgctgcc
     5461 gtggtgccgg gctttgccca ggacacctcg tcgagcgcca tggattcttc gatgatgatg
     5521 tcgtcgtcga tggactgctc atcgatgtcg ggaatggaca gctcatcgat gatgtcgagc
     5581 tcgatggcct ccagcgacat gatgtcgagc agctgcccgc cgatggacag ctcgatgatg
     5641 atgtcgtcgt cctcggcgat gtgatccggc gcgggcgggg tcgatcccgc ccgctatccc
     5701 ttgggggcgc cgttggtcca ggtgacgttg aggccattga gcgggacggc cgacagcgac
     5761 atcttgccgg aaccgagctg caactcgcgg gcgtgcgcca ggtagatcag cgtgttgttg
     5821 gcctggtcgt agacgcgggt gatgcgcagc gacttccaga tcaggctgcg ctgctccttg
     5881 aagatttcct cgccgccggc gcccatggcg atggtgccga cggtcaccgg gccagaggcg
     5941 gcgcaatcga tagccgaata ggacggatcc tcgaaccagt tgccctgctg caggcggtcg
     6001 atgaggctgc ggttgaaata ggcgaggtgg cagaccacgc ccttcacctg cgggtcctcc
     6061 accgcatcga tggcgatatc gttgccggtc cagtcgacac tgatcttggc gaccgactgg
     6121 gtgttgtcct tgccgcaggc ggcgagcagc agcacgacca gcacgaggcc ggcggcgcgg
     6181 gcgaaacggg tcagcattgg cggttccctc aacagagccg atgacggcga gtgatgtggg
     6241 gccaacggag cgtgagcgca agggcgacgc ggcggtggat gcgggtgggc tcagtagcga
     6301 cggaggcggc gctcgatata gcggacgacg agggacaggg agatggtcat cgtcaggtag
     6361 aggaaggcga cgacgttgta ggtctcgaag aacttgaagg tggaggcgga gtagaccttg
     6421 ccgagctggg tgatgtcctg gacgccgagc gaggagacga gggcggaatc cttgatcatc
     6481 gagacgaagt cgttgcccag gggcggcagg atgatgcgga aggcctgcgg cgcgacgatg
     6541 tggcgggcga tctgggagcg atgcaggccg agggcgcgcg ccgcctcgag ctggccggcg
     6601 ggcaccgcct cgatgccggc gcggaacacc tcgctgagga acgccgagta gcagatggtc
     6661 agcgcgatga tggcgcgcca ggtgagatcg aaattgcgca ccgtgagcac cggcatccag
     6721 cccagcagct gcagcgggtg ggtcagccag ttggcggcga cgatggtggc gggagcgccg
     6781 acgaaggcgg tgtagaacag gaagacgagg atggggatgc cgcggatcaa ctcggtgtag
     6841 aaggtcgcga gctgcaccag caccggctgg ccggaggtgc gcagcagcgc cagcccgagg
     6901 cccaggagag cggcgagggc aaaggcgacg agggtgaccc agagcgtggt ggccatgccg
     6961 ccgacgaggg cgccgaagat ccgggcgtag tcctcgttgg cgacgatggc ccagagcgtc
     7021 agcacgccga ggagcgcgat ggcgagcagc cagaacggga agtcggcaag gcgccggcgc
     7081 gaacggtgca tggaggggga cccgcgggaa cgcacggcgg ccgcggatcc cgattggact
     7141 acttggcggc gctatactcg tagaaccatt tgcggttcaa ggcatcgatg gtgccgtcgg
     7201 ccttcatgct ggcgagcgcc gcgttgaccg gggcgacgag gtcggagccg ggcttgaaga
     7261 tgaagccgaa ctggtccgag ccgacggggt cgccgatggt cttgaagacg cccgggtcgg
     7321 cggcgatgta gccgttgacc gaggcctggt ccatcagcac catgtcgacg tcgccggatt
     7381 tgagcgcctg caccgaggcg ccgaacgtgt cgaacagctt gatgcggctg tcgtcgggct
     7441 tgtcgccgtc cttgaggtcg gggttgagca ggtcctcaga ggcgtagaag ccggaggtgc
     7501 ccgactgcgc gccgaccaag aggtcggtat tggtgacgag atcgccgggc tgcgcgatgc
     7561 gcttttcgtc ggtgcggacg agcatatatt ccttgttgtc catgtaggga tcggagaagt
     7621 cgacctgctt cttgcgctca tcggtgatgg agatgccgtc catggcgata tcgtactggc
     7681 cctcgtgcac ggcctcgatc atcgggtccc atgacatgat gttccagttg accttggcat
     7741 cgaggcgctt ggcgatctcg ttggtcgcgt cgtactccca gccgatgccc tggccggtct
     7801 tgggatcagc gaagttgagc ggggtatagg cgttctcggt gacggcctgg atgacccggc
     7861 ccttgaggtc gggcagcgcg gtggcggcgg cggccgagcc caccatcagg gcggcaaaga
     7921 cggtcgctac aagcgtcgaa acagcggatc tcatcggatt ctccctgcag gtgccccggc
     7981 gctttgttgc cggcgccggc ttcgggcgca cactagaccg gccgctgcac ccggctcaac
     8041 cccgcggcgc ggcatcggcg gtcagacggt cgggtccgcc cagctcgaca tgaaatgctg
     8101 cggcaacacc atttcctcct ccgcccggtc gcgggtcagc gccgcggtgg tggcattgac
     8161 gcgctgcgcc aggaggcggg cgatctgcag cagccagtcc ggatgggcgc gcagcacctc
     8221 cagggcattg tcgacgacga aatagtcgac ttcactgacg gcgcgcaccg ttgcggtctg
     8281 cggcagatcg agcagcacgc tcatctcgcc gacgacggcg ccgggggtgc ggatggtcga
     8341 gacgtgcctg ccgtcgcgaa cgacctcgag ttcgccctgc ttgaggacgt aaagctggcc
     8401 ggtgcgaccg ccctgctcga tgagcgccat cccgggggcg atccagtcgc ggcgcagcca
     8461 ggagtcgggc atcggggtcc tcacaatgga atgacgggca gcagtccggt cgccccgatc
     8521 ctagccgatc ggccaggcga accgacagag ccgattttcg acggcaagcc ttccggaggc
     8581 agcgtttttg cggcaagagg ggccgcccgc tccggttccc tgccggcggc ggcgagaatg
     8641 cgccggtctg ctgccggcaa ggagttgcag atg
//
LOCUS       DATAZA010000132         2593 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_129257, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000132 DATAZA010000000
VERSION     DATAZA010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2593
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129257"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..977)
                     /gene="sufB"
                     /locus_tag="VHZ56_03275"
     CDS             complement(<1..977)
                     /gene="sufB"
                     /locus_tag="VHZ56_03275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020012831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HEX4297017.1"
                     /translation="MAETTNYRDEIPTLKDEIDHATVDSVRALDVDQYKYGFETVIES
                     DRAPIGLSEDTIRFISAKKNEPGWMLEWRLEAYRRWLTMDEPKWARVHYPKLDFQDMY
                     FYSAPKKANAPKSLDEVDPALLEMYEKLGVPLKEREILAGVERPKVAVDAVMDSVSVT
                     TTFRDELAKVGIIFCSISEAIREYPELVQQYLGSVVPVTDNYYATLNSAVFTDGSFCY
                     VPKGVRCPMELSTYFRINERKTGQFERTLLIADAGAYVSYLEGCTAPMREENQLHAAV
                     VELVALENAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGDCRGDNSKISWT"
     gene            complement(986..2140)
                     /locus_tag="VHZ56_03280"
     CDS             complement(986..2140)
                     /locus_tag="VHZ56_03280"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX4297018.1"
                     /translation="MTASATYLDHNASAPLLPEARDAVVAALGMTGNPSSVHGHGRAL
                     RALVDAARGKVAKLAGATREQVVLTGSATEAITQAVVGGAKAFGVGGIVVSAGDHTAA
                     LKAAEATGLPVTTAGLDAAGCIRVDEIAAAMARADAVGQKLLVAVHLVNNETGVIQPL
                     DRIEVLVGTSPHYLFVDAVQAFGKMHLEFSTRAPDMMAVSAHKIGGPSGIGALLAKGH
                     ADQVRLIPGGGQETGRRGGTEAAALIAGFGAAAEAFPDCFYRANVSELIRAAEDGMRN
                     MAPDLVIFGEAADRIGNVSNFAVPGLKNTVATMGLDLKGISISSGSACSSGKVGPSHV
                     LKAMGVPAEVGECALRLSVGWNTTEADIAVFLEGFSEVLGRHRERRHRAA"
     gene            2376..>2593
                     /locus_tag="VHZ56_03285"
     CDS             2376..>2593
                     /locus_tag="VHZ56_03285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007197615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX4297019.1"
                     /translation="MPEVIFNGPEGRLEGRYQPGKDPNAPIAIVLHPHPEFGGTMNNQ
                     IVYNLFYMFAKRGFSVLRFNSRGVGRSQG"
BASE COUNT          420 a          892 c          805 g          476 t
ORIGIN      
        1 gtccagctga tcttcgagtt gtcgccgcgg caatcgccgc gcttggtgac gaaattgtag
       61 atgccgccct tgccgtcctt gtcgcccggg taccagttct gcaccgtcga atacttgatc
      121 tcggcattct cgagcgcgac cagctcgacc accgcggcgt ggagctggtt ctcctcgcgc
      181 atcggcgccg tgcagccttc gaggtagctg acataggcgc cggcgtcggc gatcagcagc
      241 gtgcgctcga actggccggt ctttcgctcg ttgatgcgga aataggtgct gagctccatc
      301 gggcagcgca cgcccttggg gacgtagcag aacgagccgt cggtgaagac ggcggagttc
      361 agcgtggcgt aatagttatc ggtcaccggc acgaccgagc cgaggtactg ctgcaccagc
      421 tcggggtact cgcggatcgc ctcgctgatc gagcagaaga tgattccaac cttggccagc
      481 tcgtcgcgga acgtcgtcgt caccgagacg gaatccatca ccgcgtcgac ggcgaccttc
      541 ggccgctcga caccggcgag gatctcgcgc tccttcagcg gcacgccgag cttctcgtac
      601 atttcgagca gggccggatc gacctcgtcc agtgacttcg gggcgttcgc cttcttcggc
      661 gccgagtaga agtacatgtc ctggaaatcg agctttgggt aatgcacccg ggcccatttc
      721 ggctcgtcca tggtcagcca gcggcgatac gcctcgagcc gccattcgag catccagccg
      781 ggctcgttct tcttggccga gatgaagcgg atggtgtctt cgctgagccc gatcggcgcg
      841 cggtcgctct cgatgacggt ctcgaagccg tatttgtact ggtcgacgtc gagcgcgcgg
      901 acgctgtcga ccgtggcgtg gtcgatctcg tccttcagcg tcgggatttc gtctctgtag
      961 tttgtcgtct cggccatcgc ttgtcctatg ccgccctgtg gcggcgttcg cggtgccgtc
     1021 ccagcacctc gctgaatcct tcgaggaaga ccgcgatatc ggcctccgtg gtgttccacc
     1081 cgacgctgag gcgcagcgcg cattcgccca cctccgccgg cacgcccatc gccttgagca
     1141 cgtggctcgg accaaccttg cccgacgagc aggccgagcc ggaggagatc gaaatcccct
     1201 tgaggtccag ccccatcgtc gccaccgtgt tcttcagccc cggcacggcg aaattactga
     1261 cgttcccgat ccggtcggcg gcctcgccga agatcaccag gtcgggcgcc atgttgcgca
     1321 tcccgtcctc ggccgcccgg atcagttcac tgacgttggc gcgatagaag caatccggga
     1381 acgcctccgc cgctgcaccg aacccggcga tcagcgccgc cgcttcggtg ccaccgcggc
     1441 gtccggtttc ctggccgccg ccggggatca gccgcacctg gtcggcgtgg cctttcgcca
     1501 gcagcgcccc gatgccggac ggtccgccga ttttgtgcgc gctcaccgcc atcatatcgg
     1561 gtgcgcgggt cgaaaattcg aggtgcatct tgccgaaggc ctgcacggca tcgacgaaga
     1621 ggtagtgcgg cgacgtgccg acgagcacct cgatgcgatc gagcggctgg atcacgccgg
     1681 tctcgttatt gacgaggtgg acggcgacca gcagcttttg tccaacggcg tcggcccggg
     1741 ccatcgccgc ggcgatctcg tcgacgcgga tgcagccggc ggcatcaagc ccggccgtcg
     1801 tcaccggcag cccggtggct tctgcagcct tcagcgcggc ggtgtggtcg ccggccgaaa
     1861 cgacaatgcc gccgacgccg aacgccttgg caccgccaac caccgcctgg gtgatggcct
     1921 ccgtcgccga gccggtcaac accacctgct cccgcgtcgc gccggccagc ttcgccacct
     1981 tgccgcgcgc ggcgtcgacg agtgcccgca gcgcccgtcc atggccatgc accgaagatg
     2041 gattgccggt catgccgagc gctgcgacca cggcgtcgcg cgcctcgggc agcagcggcg
     2101 ccgaagcgtt gtgatcgaga tatgtcgcgc tggccgtcat cgaacaccac gagggcgcat
     2161 tgcacccacc cgcctcaaac ttcttgaatt tttgcgggcg cttcctctag aaggagcgct
     2221 cgccaacgct cggccgcagg cacgcgcctc ggctccgaaa aaccggtttg gaaccattct
     2281 aaactgattt tcgggcctac ttttagggag cagcatccca ttcgtcaagc cggacgccac
     2341 ggcgccgggc cctgcctgag gccaacgaca gaaccatgcc agaagtcatc ttcaacgggc
     2401 cggaaggccg cctcgaaggc cgctaccagc cgggcaagga ccccaacgcg ccgattgcga
     2461 tcgtgcttca tccgcatccc gaattcggcg gcacgatgaa caaccagatc gtctataacc
     2521 tcttctatat gttcgccaaa cgcggctttt cggtactgcg cttcaactcg cgcggcgtcg
     2581 gccgcagcca ggg
//
LOCUS       DATAZA010000133         6397 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_129479, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000133 DATAZA010000000
VERSION     DATAZA010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6397
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129479"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..771
                     /gene="sseA"
                     /locus_tag="VHZ56_03290"
     CDS             <1..771
                     /gene="sseA"
                     /locus_tag="VHZ56_03290"
                     /EC_number="2.8.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF008557.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004792 - thiosulfate sulfurtransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-mercaptopyruvate sulfurtransferase"
                     /protein_id="HEX4297020.1"
                     /translation="TVDASWFLPSAKRDPAAEFLAGHIPGAVFFDIDGVADKSTDLPH
                     MLLPPAEFGRQVGALGIGSDMTIIIYDEAGLFSAPRVWWEFVTMGAADVRILDGGGAQ
                     WRAEGRPLEPGQSRRPAAVFTPHFHPELVRSFAQVKEAIAAHGAIGDARPAGRFAGRD
                     PEPRPGLRSGHMPGATSVPAADLVDGGRLKPVDELRRIFERAGLGLAQPIITSCGSGV
                     TASTLMLALKMAGASDVAVYDGAWAEWGARDDAPVITG"
     gene            complement(839..1819)
                     /locus_tag="VHZ56_03295"
     CDS             complement(839..1819)
                     /locus_tag="VHZ56_03295"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX4297021.1"
                     /translation="MTLKHVLLAGVALATMSGVAYAADPIGKGLVMYMQMGGNAGDGA
                     TLARQTGAEQAAAALGVDLKEQFSAWDPGTMISQFKDAVAAKPACIEIMGHPGATAFH
                     DLVKSAVDGGIVVTVGNSPLTDLQNEFGPKGMGYAGVDLYAGGALTAKSMLAQGLKSG
                     DEAMVYGVFDQAERGQSEKGLADTLEKAGLKVDRLQISQEVNSDPTLAVPIITAYIQA
                     HPNLKAIGSQHGGVTGVMAEILQKAGKKPGDIIVGGIDLAPATVDGLKSGYVSATLDQ
                     LLYLQGFLPVLQCVMSAKYNMPGIDVNTGAGTDTPQTIDALTKLIDAGIR"
     gene            complement(1881..3011)
                     /locus_tag="VHZ56_03300"
     CDS             complement(1881..3011)
                     /locus_tag="VHZ56_03300"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4297022.1"
                     /translation="MAVATATRPSLLARVEGLPIIAVFVVLLAVFMWLAPEVFLQPFQ
                     YTTFLSTLPPIILLAVGLTFIIGAGEIDLCFPAILGFSGYVFAVIFKEGQADIVAWVG
                     AGDSDWIASPLAGEIIQWLGVVAALLAGLLVGFINGLLVAVIGIPSFIATLGTQFLWY
                     GIAAILSGGKSYALRGAETSSVWAVLVGRPFASSSVDWVQQLPMQSLWTTLIVVFMWF
                     ILNRHRFGEHTLFLGDSNAVSKVVGIDVVREKVKLFTLMGLLGGVSAIFLTLENKNYF
                     GNQGQGYLLIAIASVLIGGTSIFGGRATIVGTVFGCFIIAIVEPGLVAIGLTGSWVNA
                     VRGLIFLIAIIFYLYVDEPQRRTAFLSRFVGSRAFGRSRSAE"
     gene            complement(3014..3805)
                     /locus_tag="VHZ56_03305"
     CDS             complement(3014..3805)
                     /locus_tag="VHZ56_03305"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4297023.1"
                     /translation="MTADATAVAAAPGFTDLVRLEGVQKYFGPVHALRDINLRIGPNE
                     IVGLIGDNGAGKSTLIKTMTGVLKPSAGRIFVRDRELPLSDYSVRMAHDLSIETVYQD
                     KSLGEKQPLWRNFFVGRQITNRFGFIDIKREKAIAQEILLDTIGFRGAGITVDSTIAN
                     LSGGERQGIAIGRAMHYKADLIILDEPTAALGVAEVRKVVDFVRRIKSSGRSCVYIEH
                     NLAHVHEVADRLIVLDRGSVVTDIRPRDMSVAELTEYLIDLQRNH"
     gene            4079..4870
                     /locus_tag="VHZ56_03310"
     CDS             4079..4870
                     /locus_tag="VHZ56_03310"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FadR/GntR family transcriptional regulator"
                     /protein_id="HEX4297024.1"
                     /translation="MPSPEKPGTPPQTAASAVADALAQTILKEIRPGTSLPSEGELAT
                     RFGVSRLTLREAVKMLAGRGLLDVGRGRRAIVREPSGIAFSDFLTTVIQNDPKGLFDL
                     IELRMSLEVHSAMLAARRVSRAGIATLESAIDGMREAATAGKAGVELESSEQSFHAQD
                     VLFHESVALASGNRLISYLFEAMATPLRWSFYLSRRGHDLRGHTVDDTIVAHQAILAA
                     IRDGNPKAAEAAMRAHLEDTERDIRAALNSRPTGNVVWGDSTVPS"
     gene            4956..5915
                     /locus_tag="VHZ56_03315"
     CDS             4956..5915
                     /locus_tag="VHZ56_03315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015314494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
                     /protein_id="HEX4297025.1"
                     /translation="MSNRQDQGGRRLDDAARAGWLYYVAGNNQEEIARKLGVSRQTAQ
                     RLVSLSVSEGLIKVRLDHPIGRCMELAERLRQRFALDLVEVVPSDPESSSTITGVAQA
                     AAAEIERRLKSPKPIIMAIGTGRTLKAAIEQLTPMEAPQHKIVSLTGNIAPDGSASYY
                     NVIFNMADTVQARMFPMPLPVIASSPEEREMLLRQPMVKETLALTARADITFIGIGDL
                     GADAPLYLDGFITEPELKALQKAGAIGEIVGWAFDAQGKMIDGLTNDRVASAPMPSRE
                     SSLVVAIAMGDKKMPGIVAALNRRLVNGLMTDERTAAKLLGTK"
     gene            6075..>6397
                     /locus_tag="VHZ56_03320"
     CDS             6075..>6397
                     /locus_tag="VHZ56_03320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX4297026.1"
                     /translation="MKLTPILLGALTAVLLSGSAFAATTLTIATVNNGDMINMQKLTD
                     DFTKANPDITLQWVTLEENVLRQKVTTDIATKGGQYDIITIGNYEVPIWAKQGWLAPL
                     DNLGA"
BASE COUNT         1153 a         2148 c         2057 g         1039 t
ORIGIN      
        1 accgtcgacg ccagctggtt cctgcccagc gccaagcgcg atcccgccgc cgagttcctc
       61 gccggccaca tccccggggc ggtgttcttc gacatcgacg gggtagccga caagagcact
      121 gacctgcccc acatgctgct cccgcccgcc gagttcggtc ggcaggtcgg cgcgctcggc
      181 attggcagtg atatgaccat catcatctac gacgaggccg ggctgttctc ggcaccgcgc
      241 gtctggtggg aattcgtcac catgggggcg gccgatgtcc gcattctcga cggcggcgga
      301 gcgcaatggc gcgccgaggg ccgcccgctc gaaccggggc agtcgcgccg cccggccgcg
      361 gtcttcacgc cgcactttca ccccgagctg gtccgcagct tcgcgcaggt gaaggaggca
      421 attgccgcgc acggcgccat cggcgatgcg cgcccggccg gccgttttgc cggccgcgac
      481 ccggagccgc gccccggcct tcggtcgggc cacatgcccg gcgccaccag cgtccccgcc
      541 gccgacctcg ttgacggcgg tcggctgaag ccggtggacg aactgcgccg gatcttcgag
      601 cgcgccgggc tcggcctcgc ccagccgatc atcaccagct gcggttccgg cgtcacggca
      661 tcgaccctga tgctggcgtt gaagatggcg ggcgccagcg acgtcgcggt ctatgacggt
      721 gcgtgggcgg aatggggcgc gcgcgacgat gcgccggtga tcaccggctg atccgaccat
      781 cggcagacaa aagccggcgg gatcgctccc gccggccgtg catgctgtcg cgtggcgcct
      841 agcggatgcc ggcgtcgatc agcttggtca gggcgtcgat cgtctgcggc gtatcggtgc
      901 cggctccggt gttcacgtcg atgcctggca tgttgtactt ggcgctcatc acgcactgca
      961 gcaccggcag gaagccctgc aggtagagta gctggtcgag cgtggcgctg acatagcccg
     1021 acttgaggcc gtcgaccgtc gccggggcga gatcgatgcc gccgacaatg atgtcgcccg
     1081 gcttcttgcc ggccttctgc aggatctcgg ccatcacgcc ggtgacgccg ccgtgctgcg
     1141 acccgatcgc cttgaggttg ggatgggcct ggatgtaggc ggtgatgatc ggcaccgcca
     1201 gcgtcgggtc ggagttgacc tcctggctga tctgcagccg gtcgaccttg aggccggcct
     1261 tctcgagcgt atcggcgagc cccttctcgg actgcccacg ctcggcctgg tcgaacacgc
     1321 catagaccat cgcttcgtcg cccgacttga ggccctgcgc cagcatcgac ttcgccgtca
     1381 gcgcgccgcc ggcatagaga tcgacgccgg catagcccat gcccttcggt ccgaactcgt
     1441 tctgcaggtc agtcagcggc gagttgccaa cggtgaccac gatcccgccg tccactgcgc
     1501 tcttgacgag gtcgtggaac gccgtcgcgc cggggtggcc catgatctcg atgcaggcgg
     1561 gcttggccgc cacggcatcc ttgaactggc tgatcatggt gcccggatcc caggccgaga
     1621 actgctcctt gagatccacc ccgagagccg cggcggcctg ctcggcgccg gtctggcggg
     1681 cgagcgtcgc gccgtcgccg gcgttgccgc ccatctgcat atacatcacc aggcccttgc
     1741 cgatcggatc ggcagcgtag gccacgcccg acatcgtggc gagcgccacg ccggcgagca
     1801 gaacatgctt caaagtcatt tgcgtcctcc cattttgacg accggctgct gcctctcgcg
     1861 gcagcaacgg cggtcgcctt tcattcggcc gatcgagatc ggccgaaagc tcggctgccg
     1921 acaaatcgcg acaggaacgc cgttctgcgc tgcggttcgt cgacgtaaag gtaaaagatg
     1981 atggcaatga gaaagatcag gccgcgcacc gcattgaccc atgagccggt caggccgatc
     2041 gccaccagcc ccggctcgac gatggcaatg atgaagcagc cgaacacggt gccgacgatg
     2101 gtggcgcgcc cgccgaagat cgacgtgccg ccgatcagca ccgaggcgat ggcgatgagc
     2161 aggtagccct ggccctggtt gccgaaatag ttcttgttct cgagcgtcag gaagatcgcc
     2221 gagacgccgc cgagcaggcc catcagcgtg aacagcttga ccttctcgcg caccacgtcg
     2281 atgccgacga ccttcgagac cgcgttggaa tcgccgagga acagcgtgtg ttcgccgaag
     2341 cggtggcggt tgaggatgaa ccacatgaac accacgatga gggtcgtcca cagcgattgc
     2401 atcggcagtt gctggaccca gtcgacgctg gacgacgcga acggccggcc gaccaggacg
     2461 gcccagacgc tgctggtctc ggcgccgcgc agtgcgtagg acttgccgcc cgacaggatc
     2521 gccgcgatcc cgtaccagag gaactgcgtg ccgagcgtgg cgatgaacga cgggatgccg
     2581 atgacggcca ccagcaggcc gttgatgaac cccacgagca gcccggcgag cagcgccgcg
     2641 accacgccga gccactggat gatttcgccg gccagcggcg acgcgatcca gtcgctgtcg
     2701 cccgctccca cccaggcaac gatgtcggcc tgcccttcct tgaagatgac ggcgaagaca
     2761 tagcccgaaa agcccaggat cgccgggaag cagagatcga tctcgccggc gccgatgatg
     2821 aaggtcagcc cgaccgccag caggatgatc ggcggcaggg tggaaaggaa cgtcgtgtac
     2881 tggaagggct gcaggaacac ctcgggcgcc agccacatga agacagccag cagcaccacg
     2941 aacacggcga tgatcggcag gccctcgacg cgcgcaagga ggctggggcg ggttgcggtg
     3001 gcgacagcca tgatcagtgg ttccgctgca ggtcgatgag atattcggtg agctcggcga
     3061 ccgacatgtc gcgcggccgg atgtcggtga cgaccgagcc gcgatcgagc acgatcagcc
     3121 ggtcggcgac ttcatgcacg tgcgcgaggt tgtgctcgat atagacgcag gagcggcccg
     3181 agctcttgat ccgcctgacg aagtcgacga ccttgcgcac ctcggcgacg ccgagcgccg
     3241 ccgtcggctc gtcgaggatg atcaggtcgg ccttgtagtg catggcgcgt ccgatcgcga
     3301 tgccctgccg ctcgccaccg gagaggttgg caatggtgga atccacggtg atgccggcac
     3361 cacggaagcc gatcgtgtcg agcaggattt cctgcgcgat cgctttctcc cgtttgatgt
     3421 cgatgaaacc gaagcgattg gtgatctgcc ggccgacgaa gaaattgcgc cacagcggct
     3481 gcttctcgcc gagcgacttg tcctggtaca ccgtttcgat cgacagatcg tgcgccatgc
     3541 ggaccgagta gtccgaaagc ggcagctccc tgtcgcgcac gaaaatgcgt cccgcggagg
     3601 gcttcagcac gccggtcatg gtcttgatca gcgtcgactt gccggcgccg ttgtcgccga
     3661 tgaggccgac gatctcgttg ggaccgatcc gcagattgat atcgcgcagc gcatgcacgg
     3721 ggccgaaata tttctgcacg ccttcgagcc gcacgaggtc ggtgaaaccg ggcgccgcgg
     3781 caaccgctgt cgcgtccgcc gtcatctcga aggagcccgc tcatccgggc agcacaaaac
     3841 ccgcgccgcg aacatcctgt cgtcctccca cgagtggcgt ttgtcgataa acgccacgcg
     3901 aaggacgcta gagtagtcag acagtcctgt aaagctatcc caatcctcag ccgccaacct
     3961 tgttaaaccc tcgacgcgac aggcccggga tttcgacgct tatggcgacc gctgcccggc
     4021 tttacgaggc gacagaaacc tatatgttag gagacttgtc tgacatgaag gaacgtcgat
     4081 gccctcgccg gaaaagcccg gaacaccgcc tcagaccgcc gcatcggccg tcgccgacgc
     4141 gctggcgcag accatcctca aggagatccg gcccggcacc agcctgccga gcgagggcga
     4201 actggcgacc cgtttcggcg tcagccgcct gacccttcgc gaggccgtca agatgctcgc
     4261 cgggcgcggc ctgctcgacg tcgggcgcgg ccgccgcgcc attgtccgcg agccgagtgg
     4321 aatagcgttc tccgatttcc tgacgaccgt catccagaac gatcccaagg gcctgttcga
     4381 cctgatcgaa ctgcggatgt cgctggaggt gcattccgcc atgctcgcgg cccgccgcgt
     4441 cagccgggct ggcattgcaa cgctggagag cgccatcgat ggcatgcgcg aggcggcaac
     4501 ggccggcaag gccggggtcg agctcgagag ctcggagcag agcttccacg cgcaggacgt
     4561 gctgttccat gagtccgtcg cgctggccag cggcaaccgc ctgatctcct atttgttcga
     4621 ggcgatggcg acgccgctgc gctggagctt ctacctcagc cggcgtggcc acgacctgcg
     4681 cggccacacc gtggatgata ccatcgtcgc ccaccaggcg atcctggcgg cgatccgcga
     4741 cggcaacccg aaggccgccg aagccgccat gcgcgcccat cttgaggata ccgagcgcga
     4801 cattcgcgcc gcgctcaatt cgcggccgac cggaaacgtc gtctggggcg actccaccgt
     4861 gccgtcctga gcgcgtcatt gcggaacttg cgcgcccgga aagattggcc gtaaaaagcc
     4921 cggcatcggc gtgcctccgc cgcggggtga cttggatgag caatcggcag gaccagggcg
     4981 gacgtcgtct cgacgacgcc gcccgcgcgg gttggctcta ctatgtcgcc ggcaacaacc
     5041 aggaggagat cgcccgcaag ctcggcgtct cccgccagac ggcacagcgg ctggtgtcgc
     5101 tgtcggtgag cgagggcctc atcaaggtcc ggctcgacca cccgatcggg cgctgcatgg
     5161 aactggccga acggctgcgg cagcgcttcg cgctcgatct cgtcgaagtc gtgccgtccg
     5221 atccggaatc gagttcgacc atcaccggcg tcgcccaggc cgccgccgcc gagatcgagc
     5281 ggcgattgaa gtcgcccaag ccgatcatca tggccatcgg caccggccgc acgctcaagg
     5341 ctgccatcga gcagctgacg ccgatggagg cgccgcagca caagatcgtg tcgctcaccg
     5401 gcaacatcgc gccggacggt tcggcctcgt actacaacgt catcttcaac atggccgaca
     5461 ccgtgcaggc gcggatgttc ccgatgccgc tgccggtgat cgcctcctct cccgaggaac
     5521 gcgaaatgct gctgcggcag ccgatggtga aggaaacgct cgccctcacc gcccgggccg
     5581 acatcacctt catcggcatc ggcgacctcg gtgcggacgc ccccctctac ctcgacggct
     5641 tcatcaccga gcccgaactc aaggccctgc agaaggccgg tgccatcggc gaaatcgtcg
     5701 gctgggcctt cgacgcgcag ggcaagatga tcgacggatt gaccaatgac cgcgtcgcca
     5761 gcgcgccgat gccctcgcgc gaatcgtcgc tcgtcgtagc aattgccatg ggcgacaaga
     5821 aaatgcccgg catcgtcgcg gctctcaatc gacgcttggt taacggcctg atgaccgacg
     5881 agcgcacggc cgcgaaattg ctcggcacta aataacccat tgaaatcatg taatctgcaa
     5941 tcgatttcac atctgccatg aggcacgtgc gtcatggatt gtcggcgcga gccgcttgac
     6001 agtcttaacg tttgtgtgag taattgccca cgaacaaagc aaaagctcgc tttgtcaaag
     6061 ggaggaattt ccgaatgaaa ctgaccccaa ttctgttggg cgcgctcacg gctgtcctgc
     6121 tttccggctc ggcctttgcc gctacgacgc tgaccatcgc caccgtgaac aacggcgaca
     6181 tgatcaacat gcagaagctg accgacgact tcaccaaggc gaacccggac atcaccctgc
     6241 agtgggtgac gctcgaagag aacgtgctgc gccagaaggt caccaccgac atcgccacca
     6301 agggtggcca gtacgacatc atcaccatcg gcaattacga agtgccgatc tgggccaagc
     6361 agggctggct ggccccgctc gacaatctcg gcgccga
//
LOCUS       DATAZA010000134        14462 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2915616, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000134 DATAZA010000000
VERSION     DATAZA010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 14462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14462
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2915616"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..441
                     /locus_tag="VHZ56_03325"
     CDS             <1..441
                     /locus_tag="VHZ56_03325"
                     /inference="COORDINATES: protein motif:HMM:NF024579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297027.1"
                     /translation="LKVAQTADEADGIVQQIWSVWLAPANSDLSQRMSRAGAAMTGGD
                     DAAALTILNSVVTDFPDYAEGWNQRATLYFEMGNLDASLADIARVLALEPRHFGALSG
                     RVMIYLKQGKRADALRDMVAALAIDPYLSEKALFPELAQDVTHV"
     gene            467..760
                     /locus_tag="VHZ56_03330"
     CDS             467..760
                     /locus_tag="VHZ56_03330"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008597066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4297028.1"
                     /translation="MTDDFSIEREDAGGHGRYVVHLPGELEAEMTFRKLGDTIIAIDH
                     TYVPPEFRSSGLALKLVERGIADARAGGIKVKPECSYVVAQFRRHPGWSDLLA"
     gene            complement(767..2512)
                     /locus_tag="VHZ56_03335"
     CDS             complement(767..2512)
                     /locus_tag="VHZ56_03335"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEX4297029.1"
                     /translation="MAAQKIRRAPTLRTSMLLLTLVGFAVVSLPAYWGFTTLVNAAVA
                     QLGTLFAEKQILFDRYRGSDALSREVALAETLSRSPAILEWARDEADPDKKARAIAEL
                     EQYRQSFADHSYFFVVNASGDYYYNDAQNSHAGSEFSFTVKRGNPSDAWYYATVALQS
                     GCHLNVDHDDELNLTKVFINCVIRDRDDTVLGVLGTGLDLSAFVKQVVDFPQPGVQAM
                     FIDAQGAIQAHRDPRFIDFHSLTNAIENRKTIFSLLDLPADRTALQQMMDEVTTGDVE
                     VRSRFMQVDGRPVLVGVGYLDRLGWYNVSFMDVDKIIDRSLFLPIGLLLAATMIAVAL
                     VIAFLFKVLVLDRLKRVEQVVVAVKDGDRSPVAPDPANDEIGRLSRSFAAMASAVQDN
                     VKTLELLVEERTEELKTLAYRDQLTGIANRRGFSEAFGRVRDEAAPGARLALLLIDID
                     RFKAINDSCGHQAGDEVAVEVAHRISAVLRPADVCGRWGGDEFIVLFADLGSRPLKPI
                     AEAVHRGLSQPVALGDGRSVAVTVSIGACLVEPGETVEQVAEMADAALYAAKEAGRDR
                     VVLHDPTRVRAAAAQ"
     gene            complement(2617..3216)
                     /locus_tag="VHZ56_03340"
     CDS             complement(2617..3216)
                     /locus_tag="VHZ56_03340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008124593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX4297030.1"
                     /translation="MDDYLFAEIAAPKGAPLLLLFHGTGGDENDLVGLGRQLMPDAHI
                     VSPRGDVSESGALRFFRRAGEGIYDMADFARATEKMTGFIARRAAAIGPSSVTALGFS
                     NGANIIAGVLFTAPGLLDRAVLMHPLIPFEPAPQPGLAGKPVLITAGRGDRIAPPSRT
                     EALAEYFLAQGAASRVAWQEAGHDIRRPEVLAVRDFLAS"
     gene            complement(3220..4152)
                     /locus_tag="VHZ56_03345"
     CDS             complement(3220..4152)
                     /locus_tag="VHZ56_03345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018429824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX4297031.1"
                     /translation="MLDQIKGLHHVTAMAKDAAQNNGFWTRTLGLRRVKQTVNFDEPS
                     VYHLYYGDAAGTPGSVMTYFPFPHMARGRPGTGEVGTTVFSVPEGALGWWEERLQSAG
                     LADLARDESFGQRRLHFSGPDGDGLALVEDKNDVRLPWTQGGVAADRAIRGFHSASLR
                     LRDEGATEELLKFMGYEIADTHDGTKRLARPGGNGADFVDLETLPGAAHAQLGAGSVH
                     HIAFAVPTRADQLEVRKALSDTGYQLTPVIDRDYFFSVYFRTPGGVLFEIATNEPGFD
                     RDEDTAHLGEALKLPRQHEHLRASLERTLTPLGD"
     gene            complement(4261..5067)
                     /locus_tag="VHZ56_03350"
     CDS             complement(4261..5067)
                     /locus_tag="VHZ56_03350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020051387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HEX4297032.1"
                     /translation="MRRYSACIEWLFADAAVPPGSPEGPGAARSVVSFPDRIRAAKAA
                     GLDAVEFWSWSGKDLDAVKAALDETGLPLAAISCEPVTDITDPELHAVFLDGVRTSLP
                     VALRLGAPVLIALSGDDRPGVPREAQHAALVRVLKDAAELLKGSGVVLALEPLNDRLD
                     HPGYYLTSTTEGLDIVDEVDRPEVKLLYDVYHSAMMGEHTEDVLEGRVDRVAHAHLAD
                     TQGRGEPGSGTMDWAPRLDWLAEQGYAGPIGLEYRPTKGSLASLEFLKAR"
     gene            complement(5064..6368)
                     /gene="pncB"
                     /locus_tag="VHZ56_03355"
     CDS             complement(5064..6368)
                     /gene="pncB"
                     /locus_tag="VHZ56_03355"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005977689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004516 - nicotinate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0019358 - nicotinate nucleotide salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEX4297033.1"
                     /translation="MPRTDIARRVHNHAWKLDPIVRSLLDTDFYKLLMLQMIWGLYPR
                     VNATFSLINRKTSVRLAEEIDIEELRAQLDHARSLRFSKKEMIWLAGNSFYGSRQIFS
                     PEFLRWLADFRLPAYELGKRDGQFELSFPGRWAETTMWEIPALAIINELRSRAALKNY
                     GPFTLDVTYARAKAKMWEKVERLKKLSQLRISDFGTRRRHSFLWQRWCVEALKEGLGS
                     NFNGTSNVLLAMDNDLEALGTNAHELPMVLAAIAPSETALLAAQYQVLEDWRSYYGGN
                     LLIVLPDTFGTEAFLREAPDWVADWTGFRPDSAPAIEGGERIVSWWKSRGREPREKLL
                     VFSDGLDVDMIEEAYHHFAGRVRMAFGWGTNLTNDFIDCSPFVNHQLDPISLVCKVSS
                     ADGHPAVKLSDNPEKATGDPEEIARYLRIFGNKGRVAHEVVV"
     gene            6538..7518
                     /locus_tag="VHZ56_03360"
     CDS             6538..7518
                     /locus_tag="VHZ56_03360"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4297034.1"
                     /translation="MKKSILLLATAAAVVALASGANAADKLKIGFLPGVVDPFYQVMQ
                     LGVEQAAKDLGYTVVTQIPPTWGVEAQTPLLNAMVARGDLNYIITAPVDQDQMVAPLK
                     AANDAGIKIITVDTFLGDGDYANGKVTFPISYLGSDNEAGGRTCADGLAAAVGGKGTV
                     YLLSTNPNVSSVGAREKGFKEEMAAKYPGITVIGPDYDLDDQNKAVQMTSAVLQAHPD
                     LVGVFGTNVFSAGGAGTAIANAGLTGKVQVVAYDATKQAMEMLDQGTVSQVLAQKPFD
                     MGYMAVEFAAADAAGVTSLPKRIETGFAILDKTNENDPNFSRFVYKVPGQ"
     gene            7642..8781
                     /locus_tag="VHZ56_03365"
     CDS             7642..8781
                     /locus_tag="VHZ56_03365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4297035.1"
                     /translation="MVVSPETLTPPRAPALSTPRRLLLLLSQLWAWAFLAVMILFFVA
                     TVPLLSGGISFLTIRNSQNILVAIVPVLLLGLGQTFVIISAGIDLSVGWVMSLASVLS
                     ALALRNSFNAGAPLPLAVLLGFLAAVGGSGVVGAANGVIIAKLKVPAFIVTLGSSFIV
                     RGLALLWSENTTVVGLPDGIRSYGNESLFYIIQGDHGGLFAFAPPPLTGDMLRHMDRV
                     LSWPVVGSLVVVAICMFVLHRTTFGRYTYAIGGNMQAALRAGIPVDRHIIKLYTLSAV
                     TAGIGGFLSMLQFTAGSASIGDPLLLSSIAAVIIGGVSLFGGAGTIIGTLIGALIIAV
                     LTTGLVMLNVPAFWQFIVVGVVVIVAVLIDQSRDLIVGRYRGAAE"
     gene            8778..9542
                     /locus_tag="VHZ56_03370"
     CDS             8778..9542
                     /locus_tag="VHZ56_03370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006201325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4297036.1"
                     /translation="MSEPILSVRHLTKRFGGLTAVNDVSWDIRPGEVVALLGDNGAGK
                     STLIKCISGVHVPDEGEIRFDGTPRVFARPSDARSTGIETIYQDLALANNLDVPANIF
                     LGRELKHRYFGGLIKTLDDRAMLREAAGSLEALDIRFPSLTQPIESLSGGQRQAVAIA
                     RAIYWKARLMIMDEPTNNLGVPEQHKVLELIGRMREQGVPVILITHTLPDVFAVADRV
                     VVMHRGRKVAEKPMADTTTNELVQYMVGALNDFPTG"
     gene            9547..10557
                     /locus_tag="VHZ56_03375"
     CDS             9547..10557
                     /locus_tag="VHZ56_03375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4297037.1"
                     /translation="MTTTRKVRWGIVSTADIGMKKVTPGIIKSPHSEVVALASRDLGK
                     AEVALRQLGLPNARAHGSYEALLADPDVDAIYNPLPNHLHVPITLAAARAGKHVLCEK
                     PVAITAAEATELRAARRDVLIAEAFMVRHHPQWQRARDIVRSGELGRVHLVRGAFLYF
                     NDDPGNVRNLADIGGGGLLDIGCYCVIAGRYLFEAEPKRVVALIDRDPGFRTDRLASV
                     IADFGDGRQLTFVCGTQTAGRQSVEAFGPKGSLEIVIPFNAPPDERTALLVGDTFDRN
                     LYRREILPPVDQYTLQAENFALAVLGEQALPYGVEDAISQMHVLDAIFRSETSGNWEA
                     VG"
     gene            complement(10571..11482)
                     /locus_tag="VHZ56_03380"
     CDS             complement(10571..11482)
                     /locus_tag="VHZ56_03380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008873376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX4297038.1"
                     /translation="MSELYEIIDPRFAALFNGNARLDQLHTGCKWAEGPAWFGGGRFL
                     LWSDIPNNRMLRYDETDGSVSVFRSPSNNSNGNTVDRQGRLVTCEHGARRVSRTEHDG
                     TIVTLADRFEGKRLNSPNDLVVRSDGSIWFSDPTYGIDADYEGNKAESEIGRSNVYRI
                     DPDTGAVAAVITDMVKPNGLAFSRDESQLYVADTGRTHGAQHPAHIRVFDVRGDKVAG
                     DGRVFAEASAGLFDGFRLDSDGRIWTSAGEGVSCYDPDGTLIGRIHAPEVVANCVFGG
                     LKRNRLYICGTTSLYAVYLMINGARTY"
     gene            complement(11541..12752)
                     /locus_tag="VHZ56_03385"
     CDS             complement(11541..12752)
                     /locus_tag="VHZ56_03385"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family transcriptional regulator"
                     /protein_id="HEX4297039.1"
                     /translation="MSVDDGWEREAVATLGRGMQPTDVRHANQRALLTILAIEPGLSN
                     AELSRRSALAPQTVSSVLEHLEAAQLVVRGEVRRGRRGQPATPFHLNPLGAFAIGAEI
                     GWRHLEVDLIGFSGQVIRHYRRDYDYPDAAGVFAELSRATAEVTADLAPEERRRLAGL
                     GVAAPLGIGDPAWLLEAPAGSAALWAEIDIEAAAAAATGLPVLFSNDGNAACWAELVA
                     LPEPRPQSFAFLLIDTFLAAGIVAANRLWEGRTGVSANLGSMLVTDRLGVPRFVHQIA
                     SLDALARRLAAAGAGLGELAAEALSPAAAMVCDEWIEDASFAIAQTFLNTAAVLEYQV
                     AIVEGALPRSMLERLVAATQRQIGEIPSFGRQRPPVIAGHLGSSGAARGAAQLLLYRR
                     YFSRNLEHMAA"
     gene            13186..>14462
                     /locus_tag="VHZ56_03390"
     CDS             13186..>14462
                     /locus_tag="VHZ56_03390"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEX4297040.1"
                     /translation="MQRAAIYARLRSQQRNERSCQDQIDLCRAWAGHHGFEIVAAFSD
                     QAAAGASIASRLEFGRLMRSARNHEFDVVIAEAPDRLGRDDADLATLEQHLAVLDVSI
                     ATIPAGEVGAVPKGPMGEALLTALAARTRRGQRARVLAGAAGGGRSYGYDPTPGKPGE
                     LGINPREAAIVRRIFAEYRAGDTPRAIVQRLNHEGVPGPRGGAWNASTINGSRSRQNG
                     IVQNALYAGEIVWNRQRFIRDPGTGRRVSRPNPASEWIRTEAPQLRIVDDETFVAAAA
                     RKARVGALRPEVSRRPAYLLSGLVKCAACGSSFVVSGRNRLACSAHREQGTCSNSATI
                     DRAEIETRVLAALHRQMGEPEVVAAFVRDYQAERQLLAQMTNASRDEREARLKLLRDG
                     IERIVDRVVDGTAPEAMVARMDAMEAERKRLQS"
BASE COUNT         2319 a         5290 c         4567 g         2286 t
ORIGIN      
        1 ctcaaggttg cccagactgc cgacgaggcc gacggcatcg tccagcagat ctggtccgtc
       61 tggctggccc ccgccaattc cgacctgtcg cagcgcatga gccgcgccgg cgccgcgatg
      121 accggtggcg acgacgcggc cgccctcacc atcctcaaca gcgtggtcac cgacttcccc
      181 gactatgccg aaggctggaa ccagcgggcg acgttgtatt tcgagatggg caatctcgac
      241 gcctcgctcg ccgacatcgc cagggtcctg gcgctcgagc cgcgccattt cggggccctc
      301 tccggccgcg tcatgatcta tctcaagcag ggcaagcgcg ccgatgcgct cagggacatg
      361 gtggcggcac tcgccatcga tccctatctg agcgagaagg cgctgtttcc cgagctcgcc
      421 caggacgtca cccacgtcta gcgaagcgcg tcccgcaaag gatcacatga ccgacgattt
      481 cagcatcgaa cgcgaggacg ccggcggcca cggccgctac gtcgtccacc tgccaggcga
      541 gctcgaagcc gagatgacct tccgcaagct cggcgacacc atcatcgcca tcgaccacac
      601 ctatgtgcca cccgagttcc gcagctccgg cctggctctg aagctggtcg agcgcggcat
      661 tgccgacgcg cgcgccggcg gcatcaaggt gaagccggaa tgctcctacg tggtcgcgca
      721 gttccgccgc catcccggct ggagcgacct gctcgcctga acaaggctac tgcgccgcgg
      781 ccgcccggac ccgggtcgga tcgtgcagca ccacgcggtc gcggccggcc tcctttgccg
      841 catagagcgc cgcgtccgcc atctccgcca cctgctcgac cgtctcgccg ggctcgacga
      901 ggcatgcacc gatgctgacc gtcaccgcga cgctccggcc atcccccagc gccaccggct
      961 gcgacaggcc gcggtgcacc gcttccgcga tcggcttcag cggccggctg ccgaggtccg
     1021 cgaacagcac gatgaattcg tcgccccccc agcggccgca gacatcggca ggccgcagca
     1081 cggcgctgat ccggtgcgcg acttccaccg ctacctcatc gcccgcctgg tggccgcagc
     1141 tgtcgttgat cgccttgaag cggtcgatgt cgatcagcag gagcgccagc cgcgctcccg
     1201 gcgccgcctc gtcccgcacc cgcccgaatg cctccgagaa gccgcggcga ttggcgatgc
     1261 cggtcagctg gtcgcggtag gccagcgtct tcagctcttc ggtccgctcc tcgaccagca
     1321 gctcgagcgt cttcacattg tcctgcaccg cgctggccat cgcggcgaaa ctgcgggaca
     1381 gccggccgat ctcatcattg gcgggatcgg gcgccaccgg cgagcggtcg ccgtccttca
     1441 ccgccaccac cacctgctcc acccgcttca gccggtcgag caccagcacc ttgaacagga
     1501 acgcgatcac cagcgccacc gcgatcatcg tcgcggcgag cagcaggccg atcggcagga
     1561 acaggctgcg gtcgatgatc ttgtcgacgt ccatgaagct gacattgtac cagcccagcc
     1621 ggtcgagata gccgaccccg accagcaccg gtcggccgtc gacctgcatg aaccgcgacc
     1681 gcacctcgac gtcgccggtc gtcacctcgt ccatcatctg ctggagcgcc gttctgtcgg
     1741 ccggcaggtc gagcaggctg aagatggtct tgcggttctc gatggcgttg gtcaggctgt
     1801 ggaagtcgat gaagcgcggg tcgcggtgcg cctggatcgc gccctgcgcg tcgatgaaca
     1861 tcgcctgcac gccgggctgc ggaaaatcca ccacctgctt gacgaaagcc gagaggtcga
     1921 gcccggtccc gagcacgccc agcacggtgt cgtcgcgatc ccggatcacg cagttgatga
     1981 acaccttggt gaggttgagc tcgtcgtcgt ggtcgacgtt gaggtggcag ccgctctgca
     2041 gcgccaccgt cgcgtagtac caggcgtcgc tgggattgcc ccgcttcacc gtgaagctga
     2101 attcgcttcc ggcatgcgaa ttctgcgcgt cgttgtagta gtagtcgccc gaagcgttga
     2161 cgacgaagaa gtacgagtgg tcggcaaacg actgccggta ttgctcgagc tcggcgatgg
     2221 cgcgggcctt cttgtccgga tccgcctcgt cccgtgccca ctcgaggatc gccggggagc
     2281 gcgacagcgt ctcggcgagt gcgacctcgc gcgacagggc gtcgctgccg cgatagcgat
     2341 cgaagagaat ctgcttttcg gcgaacagcg tgccgagctg cgccactgcc gcattgacca
     2401 gggtcgtgaa gccccagtag gccggtagcg agacgaccgc gaagccgacg agggtcagca
     2461 gcagcatgct ggttctgagg gtgggcgctc ggcggatctt ttgagctgcc atgccgtgcg
     2521 cccggccgcc cggccgtctc tcctgcccgt ttccgcgcgc gaactatggg gcagggatcg
     2581 tcaacgaaat cctaaccttg accagccggt caactctcaa ctcgcgagaa aatcccggac
     2641 cgccagcacc tccggacgcc ggatgtcatg ccccgcctcc tgccaggcga cgcgcgacgc
     2701 agcgccctgc gcgaggaaat actcggccag cgcctcggtc cgcgaaggcg gcgcgatcct
     2761 gtcgccgcgg cccgccgtga tcagcaccgg cttgcccgcc agccccggct gcggcgccgg
     2821 ctcgaacggg atcagcgggt gcatcagtac cgcccggtcg agcagtcccg gcgcggtgaa
     2881 cagcacgccg gcgatgatgt tggcgccgtt cgaaaagccg agcgccgtca ccgacgacgg
     2941 cccgatggcg gcggcgcgcc ttgcgatgaa gcccgtcatc ttctccgtcg cccgggcaaa
     3001 atcggccatg tcgtagatgc cctcgccggc gcgacgaaag aaccgcagcg cgccgctttc
     3061 gctgacgtcg ccgcgcggcg agacgatgtg cgcgtccggc atcaattgcc gcccgaggcc
     3121 gacgagatcg ttctcgtcgc cgccggtgcc gtggaacagc agcagcagcg gcgccccctt
     3181 cggcgccgcg atttcggcga acagataatc gtccatggct tagtctccca gcggcgtcag
     3241 ggtgcgctcc aggctcgccc gcaggtgctc gtgctgccgc ggcagcttca gcgcctcgcc
     3301 cagatgcgcc gtatcctcgt cgcgatcgaa ccccggctcg ttggtggcga tctcgaacag
     3361 caccccgccc ggcgtgcgga aatacaccga gaagaaatag tcgcggtcga tcaccggcgt
     3421 cagttgatag cccgtgtcgc tgagcgcctt gcgcacctcg agctggtcgg ccctggtggg
     3481 caccgcgaac gcgatgtggt gcaccgagcc ggcgccgagc tgggcatgcg ccgctcccgg
     3541 cagggtctcg aggtcgacga aatcggcgcc attgccgccg ggccgcgcca gccgcttggt
     3601 cccgtcatgc gtgtcggcga tctcgtagcc catgaacttc agcagctctt ccgtggcgcc
     3661 ctcgtcgcgc aacctgagcg atgccgaatg aaagccccgg atcgctctgt ccgccgcgac
     3721 gccaccctgc gtccacggca ggcgaacatc gttcttgtct tcgaccagcg ccagcccatc
     3781 gccatccggg cccgaaaagt gcagccgccg ctggccgaag ctttcgtcgc gcgccagatc
     3841 ggccagcccg gcgctctgca gccgctcttc ccaccagccg agcgccccct ccggcaccga
     3901 gaacaccgtc gtccccacct cgcccgtgcc gggccggccc cgcgccatat gcgggaacgg
     3961 gaaatacgtc atcaccgatc ccggcgttcc ggccgcatcg ccgtagtaga ggtgatagac
     4021 gctgggctcg tcgaaattga cggtctgctt cacccgccgc aaccccaggg tacgggtcca
     4081 gaagccgttg ttctgcgcag cgtccttcgc catcgccgtg acgtggtgca gccctttgat
     4141 ctggtcgagc atggtcatct ccttccggca gcaccgccgc ctgttgatgg agatatggcc
     4201 gggcgcgatt ggctccgaaa cctcgcctcc ggacacatga ctgttgccga atatcgaacg
     4261 tcagcgcgcc ttgaggaact cgaggctcgc cagcgacccc ttggttggcc ggtactcgag
     4321 cccgatcggg ccggcatagc cctgctccgc cagccagtcg agccgcggcg cccagtccat
     4381 cgtgccgctg cccggctcgc cgcgtccctg cgtgtcggcg agatgcgcgt gcgcgacgcg
     4441 gtcgacccgc ccttcgagca cgtcctcggt atgctcgccc atcatcgccg aatgatagac
     4501 gtcgtagagc agcttcacct ccggccggtc gacctcgtcg acgatgtcga ggccctcggt
     4561 ggtggaggtg agataataac ccggatggtc gagccggtcg ttgagcggct ccagcgccag
     4621 caccacgccc gagcccttca acagctccgc cgcgtccttc agcacccgca ccagcgccgc
     4681 atgctgcgcc tcgcgcggca cgcccggacg gtcgtcgccg gatagcgcga tcagcaccgg
     4741 cgcgcccagc ctgagcgcca ccggcagcga cgtgcggacc ccgtcgagga aaaccgcatg
     4801 cagctccgga tcggtgatgt ccgtcaccgg ctcgcaggaa atcgccgcca gcggcagccc
     4861 ggtctcgtcg agcgccgcct tgaccgcatc gaggtccttg cccgaccatg accagaactc
     4921 gacggcgtcg agcccggccg ccttggccgc ccggatgcgg tcggggaaac tcaccaccga
     4981 acgagccgcg ccggggccct cgggcgaacc cggcggcacc gcggcatcgg cgaacagcca
     5041 ctcgatacag gccgaatacc gcctcacacc accacctcgt gcgccacccg gcccttgttg
     5101 ccgaagatgc ggaggtagcg cgcgatctct tccggatcgc cggtcgcctt ctcgggattg
     5161 tccgagagct tgaccgccgg atgtccgtcg gcggagctga ccttgcacac cagcgagatc
     5221 ggatcgagct ggtggttcac gaagggcgag cagtcgatga agtcgttggt gaggttggtg
     5281 ccccagccga aggccatgcg cacgcggccg gcgaagtggt ggtaggcctc ctcgatcatg
     5341 tcgacgtcga gcccgtcgga aaacaccagc agcttctcgc gcggctcgcg gccgcggctc
     5401 ttccaccagc tgacgatccg ctcgccgccc tcgatggcgg gagcgctgtc gggccggaag
     5461 ccggtccagt cggccaccca gtcgggcgcc tcgcgcagga atgcctcggt gccgaacgta
     5521 tccggcagga cgatcagcag attgccgccg tagtagctcc gccagtcctc gagcacctgg
     5581 tactgcgccg ccagcagcgc cgtctcgctg ggggcgatcg ccgccagcac catcggcagc
     5641 tcgtgcgcat tggtgccgag cgcctcgagg tcgttgtcca tcgccagcag cacgttcgag
     5701 gtgccgttga aattgctgcc gagaccttcc ttcagcgcct cgacgcacca gcgctgccag
     5761 aggaacgaat gccgccgccg ggtgccgaaa tccgagatgc gcagctggct gagctttttc
     5821 agccgctcga ccttctccca catcttggcc ttcgcccgcg cataggtgac gtcgagcgtg
     5881 aacggcccgt aattcttcag cgccgcccgc gaccgcagct cgttgatgat cgccagcgcc
     5941 ggtatttccc acatcgtggt ctcggcccag cgcccgggga agctgagctc gaactgcccg
     6001 tcgcgcttgc ccagctcgta ggccggcagc cggaaatcgg cgagccagcg caggaactcc
     6061 ggcgaaaaga tctgcctcga gccataaaag ctgttgcccg cgagccagat catttccttc
     6121 ttcgaaaacc gcagcgagcg ggcatggtcg agctgcgccc gcagctcctc gatgtcgatt
     6181 tcctcggcca gccgcaccga agtcttgcga ttgatcagcg agaacgtcgc gttgacccgc
     6241 gggtacagcc cccagatcat ctgcagcatc agcagtttgt agaaatcggt gtcgagcagc
     6301 gaccggacga tcggatcgag cttccaggca tggttgtgga cacgccgcgc aatatcggtc
     6361 ctgggcatga actccgcact cctgctgccg cgccctctgt agtcggatcg cgattgaaaa
     6421 tccagctttg ccccgcagcg cggccttgca acgttgcaaa ccgtcatatt gaatggcggg
     6481 cagtcgcgca cggcaagatg cgcggcaaga tcgtttccgg gtgggaggcc caaaaccatg
     6541 aagaagtcta ttctattgct cgccacggcg gccgccgtgg tggctctggc gtcaggcgcc
     6601 aatgccgctg acaagctcaa gatcggcttt ctgccgggcg tcgtcgatcc gttctaccag
     6661 gtgatgcagt tgggcgtcga acaggccgcc aaggacctgg gctataccgt cgtcacccag
     6721 atcccgccga cctggggcgt cgaagcccag accccgctgc tcaacgccat ggtggcgcgc
     6781 ggcgacctca actacatcat caccgcgccg gtcgaccagg accagatggt cgccccgctg
     6841 aaggccgcga acgatgccgg tatcaagatc atcaccgtcg acaccttcct cggcgatggc
     6901 gactacgcca acggcaaggt gacgttcccg atctcctatc tgggctcgga caacgaggcc
     6961 ggtggccgca cctgcgccga tggcctcgcc gctgcggtcg gtggcaaggg caccgtctat
     7021 ctgctctcca ccaaccccaa tgtgagctcg gtcggcgctc gcgaaaaggg cttcaaggag
     7081 gagatggcgg ccaagtatcc cggcatcacc gtcatcggcc ccgactacga tctcgacgac
     7141 cagaacaagg ccgtgcagat gacctctgcg gtgctgcagg cccaccctga cctcgtcggc
     7201 gtcttcggca ccaacgtgtt cagcgccggt ggcgccggaa ccgccatcgc caatgccggc
     7261 ctcaccggca aggtgcaggt cgtcgcctac gacgccacca agcaggccat ggagatgctg
     7321 gaccagggca ccgtctcgca ggtgctggcg cagaagccgt tcgacatggg ctacatggcg
     7381 gtcgagttcg ccgccgcaga tgccgccggc gtcaccagcc tgcccaagcg catcgagacc
     7441 ggcttcgcca tcctcgacaa gaccaacgag aacgatccca acttctcgcg cttcgtctac
     7501 aaggttccgg gccaataagg ctcggctgcc gcatcccggg ggcgccgcct gcgcccccgg
     7561 tccatcatct ccgcgcccgc tgagcggacc gcgtcggtcg ccgcgaccgt cccccacctt
     7621 ccgtgccgta ggactccgcc cgtggttgtc tctcccgaaa cgctgacgcc gccccgggct
     7681 ccggccctgt ccacgccgcg gcgcctgctg ctgctgctga gccagctgtg ggcatgggcc
     7741 ttcctcgcgg tgatgatcct gttcttcgtc gccaccgtgc cgctgctcag cggcggcatc
     7801 agcttcctca ccatccgcaa ttcgcagaac atcctcgtcg ccatcgtgcc ggtgctgctg
     7861 ctcgggcttg ggcagacctt cgtcatcatc tccgccggca tcgacctttc ggtcggctgg
     7921 gtgatgagcc tcgcctcggt gctctcggca ctggccctgc gcaacagctt caatgccggg
     7981 gcaccgctgc cgctcgcggt gctgctgggc ttcctcgccg ccgttggcgg ctcgggcgtc
     8041 gtcggtgccg ccaacggcgt catcatcgcc aagctcaagg tgccggcctt catcgtcacc
     8101 ctcgggtcct cgttcatcgt ccgcggcctg gcgctgctgt ggagcgagaa caccaccgtc
     8161 gtcggcctgc cggacggcat ccgcagctac ggcaatgaat cgctgttcta tatcatccag
     8221 ggcgaccatg gcgggctgtt cgccttcgcc ccgccgccgc tgaccggtga catgctccgg
     8281 cacatggacc gcgtcctctc atggccggtg gtcggctcgc tcgtcgtggt ggcgatctgc
     8341 atgttcgtct tgcaccgcac cacgttcggc cgctacacct acgccatcgg cggcaacatg
     8401 caggcggcgt tgcgcgccgg catccccgtc gatcgccaca tcatcaagct ctacaccctt
     8461 tctgccgtca ccgccggcat cggcggcttc ctgtcgatgc tgcagttcac cgccggctcg
     8521 gcctcgatcg gcgatccgct gctgctctcc tcgatcgctg ccgtcatcat cggcggggta
     8581 tcgctgttcg gcggcgccgg caccatcatc ggcacgctga tcggcgccct gatcatcgcc
     8641 gtgctgacca ccggcctcgt catgctcaac gtcccggcgt tctggcagtt catcgtcgtc
     8701 ggcgtggtgg tgatcgtcgc cgtgctcatc gaccagtcgc gcgacctcat cgtcggccgc
     8761 taccggggag ccgccgagtg agcgagccga tcctctccgt ccgccacctc accaagcgct
     8821 tcggcggcct caccgcggtc aacgatgtca gctgggacat ccgccccggc gaggtcgtcg
     8881 ccctgctcgg cgacaatggc gccggcaagt cgacgctgat caaatgcatc tcgggcgtcc
     8941 atgtccccga cgagggcgag atccgcttcg acggcacgcc gcgggtgttt gcccgcccca
     9001 gcgacgcccg cagcaccggc atcgagacca tctaccagga cctggcgctc gccaacaatc
     9061 tcgacgtgcc ggccaacatc ttcctcggcc gcgagctcaa gcaccgctat ttcggcggcc
     9121 tgatcaagac cctcgacgat cgcgccatgc tgcgcgaggc tgccggcagc ctcgaggcgc
     9181 tcgacatccg gttccccagc ctgacgcagc ccatcgagag cctgtcgggc ggccagcgcc
     9241 aggccgtcgc catcgcccgc gccatctact ggaaggcgcg gctgatgatc atggacgagc
     9301 cgaccaacaa tctcggcgtg cccgagcagc acaaggtgct cgagctgatc ggccgcatgc
     9361 gcgagcaggg cgtgccggtg atcctcatca cccacaccct gcccgacgtc tttgccgtcg
     9421 ccgaccgcgt cgtcgtcatg caccggggcc gcaaggtcgc cgaaaaaccg atggccgaca
     9481 ccaccaccaa cgagctcgtc cagtatatgg tgggcgcgct caacgatttc cccacaggct
     9541 gaagagatga cgacgaccag gaaagtccgg tgggggatcg tctccaccgc cgatatcggc
     9601 atgaagaagg tgacgccggg gatcatcaag tccccgcact ccgaggtcgt ggccctcgcc
     9661 tcgcgcgacc tcggcaaggc ggaggtcgcg ctgcgtcagc tcggcctgcc caacgcccgc
     9721 gcccatggct cgtacgaggc gctgctcgcc gatccggacg tcgacgcgat ctacaatccc
     9781 ctgcccaacc acctccacgt cccgatcacc ctcgcggcgg cccgcgccgg caagcacgtg
     9841 ctgtgcgaaa agcccgtcgc catcaccgct gcggaagcca ccgagctgcg cgccgcccgg
     9901 cgcgacgtgc tgatcgccga agccttcatg gtgcggcacc acccgcaatg gcagcgcgcc
     9961 cgcgacatcg tgcgctccgg cgagctcggc cgcgtccacc tggtgcgcgg cgccttcctc
    10021 tacttcaacg acgatcccgg aaacgtccgc aacctcgccg acatcggcgg cggcggcctg
    10081 ctcgacatcg gctgctattg cgtcatcgcc ggccgctatc tgttcgaggc cgagccgaag
    10141 cgcgtggtcg ccctgatcga ccgcgatccc ggtttccgca ccgaccggct ggcgagcgtc
    10201 attgccgatt tcggcgacgg ccggcagctg accttcgtct gcggcaccca gaccgcgggc
    10261 cgccagagcg tcgaggcgtt cggccccaag ggcagcctcg aaatcgtcat cccgttcaac
    10321 gccccgcccg acgaacgcac cgcgctgctg gtcggcgata ccttcgaccg caatctctat
    10381 cgccgcgaaa tcctgccacc ggtcgaccag tacaccctgc aggccgagaa cttcgccctc
    10441 gccgtcctcg gcgaacaggc gctgccctac ggcgtcgagg atgccatcag ccagatgcac
    10501 gttctcgacg ccatcttccg ctccgagacg tccggcaact gggaagccgt aggctgaccc
    10561 gcgccggcga tcagtaggtc cgcgcgccgt tgatcatcag gtacacggca tagagcgagg
    10621 tcgtgccgca gatgtagagc cggttgcgct tcagcccccc gaacacacaa ttggcgacca
    10681 cctctggcgc gtggatgcgc ccgatcaggg tgccgtcggg atcgtagcag ctgacgccct
    10741 cgccggcgct ggtccagatg cggccgtcgc tgtcgagccg gaagccgtcg aacagccccg
    10801 cgctggcctc ggcgaacacc cggccgtccc ccgccacctt gtctcccctg acgtcgaaga
    10861 cgcggatatg cgccggatgc tgcgcgccgt gcgtccgccc ggtgtcggcg acatagagct
    10921 ggctctcgtc gcgcgagaac gcgaggccgt tgggcttgac catgtcggtg atgacggccg
    10981 caaccgcgcc ggtgtccgga tcgatgcgat agacgttgga ccggccgatt tcgctctcgg
    11041 ccttgttgcc ctcgtaatcg gcgtcgatgc cgtaggtcgg atccgagaac cagatcgagc
    11101 catccgaccg gaccaccaaa tcgttcggcg aattcagccg cttgccctcg aagcggtcgg
    11161 ccagcgtgac gatggttccg tcgtgctcgg tgcggctcac ccggcgcgca ccatgttcgc
    11221 aggtgaccag ccgtccctgc cggtcgacgg tgttgccgtt ggaattgttc gacggcgagc
    11281 ggaagaccga gacgctgccg tccgtctcgt catagcgcag catccggttg ttcgggatgt
    11341 ccgaccagag caggaaccgg ccgccgccga accacgccgg gccctcggcc catttgcagc
    11401 cggtatggag ctggtcgagc cgcgcattac cgttgaacag cgccgcaaag cgcgggtcga
    11461 tgatctcgta gagctcgctc atgaatcccc ctcgtcgttc gccacgccta gcatgaaagc
    11521 caccagccga gaacgccgcc tcaggccgcc atgtgctcga ggttgcgcga gaaataccgg
    11581 cggtagagca gcagctgcgc cgcgcctcgc gccgcgcccg agctgccgag gtgcccggcg
    11641 attaccggcg ggcgctggcg gccgaagctc gggatctcgc cgatctgccg ctgcgtcgcc
    11701 gccaccagcc gctcgagcat cgagcgcggc agcgcgccct cgacgatcgc cacctggtat
    11761 tcgagcaccg ccgccgtgtt gaggaaggtc tgcgcgatcg cgaacgacgc gtcctcgatc
    11821 cattcgtcgc agaccatggc cgccgccggc gacaatgctt cggcggcgag ttcgccgaga
    11881 cccgctcccg ccgccgccag ccggcgcgcc agcgcgtcca gcgacgcgat ctggtggacg
    11941 aagcgcggca cgcccagccg atcggtgacc agcatcgacc cgaggttggc ggaaacgccc
    12001 gtgcgtccct cccacagccg gttggcggca acgatgccgg cggcaaggaa ggtgtcgatg
    12061 aggagaaatg caaagctctg cggtcgcggc tccggaagcg ccaccagttc tgcccagcag
    12121 gcggcgttgc cgtcgttgct gaacagcacc ggcagcccgg ttgccgccgc cgcggcggct
    12181 tcgatgtcga tctcggccca cagcgccgcg ctccccgcgg gagcctccag caaccacgcc
    12241 ggatcgccga tgccgagcgg cgcggcaaca ccgaggcccg cgaggcgccg tctttcctcc
    12301 ggcgcaaggt cggcggtgac ttcggccgtg gcacggctca gttcggcaaa caccccggcg
    12361 gcatccggat agtcgtagtc ccgccgatag tggcggatca cctggccgct gaagccgatc
    12421 aggtcgacct cgaggtggcg ccagccgatc tcggccccga tcgcgaacgc ccccagcgga
    12481 ttgagatgga acggcgtcgc cggctgcccg cgccggccgc gccgtacctc gccgcggacg
    12541 accagttgtg ccgcttccag atgctcgagc accgacgaca cggtctgcgg cgccagcgcc
    12601 gagcgtcgcg acagttcggc gttggaaagt cccggttcga tcgcgaggat cgtcagcagc
    12661 gcccgctggt tcgcatgccg cacgtcggtc ggctgcatgc cgcgcccgag ggtcgcgacc
    12721 gcctcgcgct cccacccatc gtccacgctc acgatcggat ccccccggat cgcgccctcc
    12781 gggcgctttg ccggctggtt ccggcacaat aatcgccagc taaccccttg agattgaaca
    12841 attcaaggac aaacgagcca tgcgagcgcg acgaaaacag tatatccgcc aaaccggcaa
    12901 caaagcccgc cgaagcgggg ccgttgcgct ggtccgggaa agaattggtt gcggcagcct
    12961 gcaaccgccg ttcccctgca cgcgcttccg cgctcggcag gccccgtgat cagcgcagcg
    13021 cgaccctgtg aattgcgggg ataactacag ggctcgattg acgccccacg gccgccctgc
    13081 gcccgctggc ggggaccggc gtgctcaccc gacatcgagc tgccccgctc gaaccggtca
    13141 aggccctcgc gcacgacgcg cgcgccgctt cgagctggag acgccatgca gcgcgccgcg
    13201 atctatgcga ggctcaggtc gcagcagcgg aacgagcgct cctgccagga tcagatcgat
    13261 ctctgccggg catgggccgg tcaccacggc ttcgagatcg tcgcggcgtt ctccgaccag
    13321 gcagctgccg gcgccagcat tgccagccgc ctcgagttcg gccgcctcat gcggtcggcc
    13381 cgcaaccacg agttcgacgt ggtcatcgcc gaggcgcccg atcggctggg tcgcgacgac
    13441 gccgacctgg cgaccctcga gcagcatttg gccgtcctcg acgtatcgat cgccaccatc
    13501 cctgccggcg aagtcggcgc cgtccccaag ggcccgatgg gcgaagcgct gctgaccgcc
    13561 ctcgcggcca ggacccgccg cggccagcgg gctcgcgtcc tcgccggcgc cgcaggcggc
    13621 ggccgctcct acggctacga cccgacgccc ggcaagcccg gcgagctggg catcaatccg
    13681 cgcgaggcgg ccatcgtccg caggatcttc gccgaatacc gcgccggcga cacgccgcgg
    13741 gcgatcgtgc agcggttgaa ccacgaagga gtcccaggcc cgcgcggcgg cgcctggaac
    13801 gccagcacga tcaacggcag ccgcagccgg cagaacggca tcgtgcagaa cgccctctac
    13861 gccggcgaga tcgtctggaa ccgccagcgg ttcatcaggg accccggcac tggccggcgg
    13921 gtttcccgcc ccaacccggc ctcggagtgg atccgcaccg aagccccgca gctgcgcatc
    13981 gtcgacgacg agaccttcgt ggcggccgcc gcgcgcaagg cccgcgtcgg cgccctgcgt
    14041 cccgaggtct cgcgccgccc ggcctacctg ctgtccggcc tcgtcaaatg cgccgcctgc
    14101 ggctcgagct tcgtcgtcag cggcaggaac cggctggcct gctcggcgca tcgggagcaa
    14161 ggcacctgca gcaattcggc gaccatcgac cgcgccgaga tcgagacgcg cgtgctcgcg
    14221 gccctgcacc ggcagatggg cgagcccgaa gtggtcgccg cctttgtccg cgactaccag
    14281 gctgaacgcc agctgcttgc ccagatgacg aacgccagtc gcgatgaacg ggaagcccgc
    14341 ctcaagctgc tgcgagacgg catcgagcgg atcgtcgatc gcgtcgtcga cggcacggcg
    14401 cccgaagcca tggtggcgcg catggacgcc atggaggccg agcgcaagcg cctgcagtcc
    14461 ga
//
LOCUS       DATAZA010000135         3428 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3959759, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000135 DATAZA010000000
VERSION     DATAZA010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3428
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3959759"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1022)
                     /locus_tag="VHZ56_03395"
     CDS             complement(<1..1022)
                     /locus_tag="VHZ56_03395"
                     /EC_number="7.5.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HEX4297041.1"
                     /translation="MSLAEIAPAPLGPPPSLEVRGIAKRFGGVTALTDVGFSVQPGEV
                     MALIGENGAGKSTLVKILTGVHRPDAGEIVVDGERQVFANARAAAAAGITAIHQEAVM
                     FDDLTVAENIMITHPPRRRPFGAIDWPRLQREASAHLAAIGANIDPNAQLGTIGIAER
                     HMVSIAGALAFDAQVLIFDEPTAALSLKEIEALYVIIRQLRAAGRAIVFISHKFDEIF
                     AIADRYTVLRDGAFVATGRIADTSRDDLVRMMVGRPMTHVYPKADVAIGELALEVEGL
                     SHPTEFRDVSFNVRRGEIVGFYGLVGAGRTEVMEAVFGLTPTTSGSIRIGGAAVSIGS
                     PMQAIR"
     gene            complement(1084..2109)
                     /locus_tag="VHZ56_03400"
     CDS             complement(1084..2109)
                     /locus_tag="VHZ56_03400"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX4297042.1"
                     /translation="MKRRWIIQAVAVAATSLVLGTSMTAVSTAAPPRYAMLVRVLGNT
                     AFELAHVGAEQAAKELGVDLIYTGPTENTAEGQIAQIDSLVDQHVDAIMITANDQTAL
                     LPALQRAQQRGIKVVSWDQDLDPSGRSVFVAEATNDLIALAPLKIVKNLIGTGEIGVI
                     SGAADSTTQNDWVNKMTDLTKNDPDYKGITVDEVTYGDEKSDKAYNEALGLVSKYPNL
                     KAIIAYSSVAIAAASKMVEDQHLIGKVVVTGLGFPNEMVDHVLDGATPAFAIWNMVDV
                     GYTTMKVTDALVKGQITGAKGDVVDAGRMGKLTIGDNGTLVMGELQTYDKTNVQAAAD
                     LIASVSK"
     gene            2320..2856
                     /locus_tag="VHZ56_03405"
     CDS             2320..2856
                     /locus_tag="VHZ56_03405"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX4297043.1"
                     /translation="MGFSPRRIVTATDPDGRSYFMIDGPAGNVLEQPGRGLTFHEMWI
                     TDGPLASNAGTADAAAVPVEHHPPHGGSRIRIVEFLPDTQRESGQAAADFAAVGASER
                     VVGDVDDGMHRNDTVDYNIILRGEIHACTDAGELLLRAGDVLIQRGTKHTWRNRSDSP
                     CIFASIMISAEPLGPTEP"
     gene            2881..>3428
                     /locus_tag="VHZ56_03410"
     CDS             2881..>3428
                     /locus_tag="VHZ56_03410"
                     /inference="COORDINATES: protein motif:HMM:NF014653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HEX4297044.1"
                     /translation="MSQDLQLPVDNLRRFLVELFSRVGMSAENATYSAECLILTNLWG
                     IDSHGVLRVPIYVQRLAGNVIKANPEVRRVAGKHAFEVLDGDNGMGFVVGRVAMARAV
                     ELAKAHGIGAVSVRSSNHFGAASLFARMATDAGLVGIAMTNVIPNLVVPGGSKPITGN
                     NPLAFGVPSAEPFPFMLDISMSS"
BASE COUNT          545 a         1116 c         1158 g          609 t
ORIGIN      
        1 tgccggatcg cctgcatcgg gctgccgatc gagactgccg ctccgccgat gcggatgctg
       61 cccgaggtgg tgggcgtcag gccgaacacg gcctccatca cctcggtgcg ccctgccccg
      121 acgagcccgt agaagccgac gatctcgccg cggcgaacgt tgaaggagac atcgcggaat
      181 tcggtcgggt gggagaggcc ctcgacctcg agcgccagct cgccgatggc cacatccgcc
      241 ttgggataga cgtgcgtcat cggccggccg accatcatgc gcacgaggtc gtcgcggctg
      301 gtgtcggcga tacggccggt ggcgacgaac gccccgtcgc gcagcaccgt gtagcggtcg
      361 gcgatggcga agatctcgtc gaatttgtgc gaaatgaaga cgatggcccg gcccgccgcg
      421 cgcagctggc ggatgatgac gtagagggcc tcgatttcct tgagcgagag cgcggccgtc
      481 ggctcgtcga agatcagcac ctgcgcatcg aacgcgaggg cgccggcgat cgagaccatg
      541 tgccgctcgg cgatgccgat ggttccgagc tgggcgttcg gatcgatgtt cgccccgatc
      601 gccgcgagat gcgccgaggc ctcgcgctgc aggcggggcc agtcgatcgc gccgaacggc
      661 cggcggcgcg gcggatgcgt gatcatgatg ttctcggcga cggtgaggtc gtcgaacatc
      721 accgcctcct ggtggatcgc ggtgatcccc gcggcagcgg cggcgcgggc gttggcaaag
      781 acctgccgct cgccatcgac gacgatctcg ccggcgtcgg gccgatgcac gccggtgaga
      841 atcttgacga gagtggattt tccggcgccg ttttcgccga tcagcgccat gacctcgccg
      901 ggctgcaccg agaagccgac atcggtcagg gcggtgacgc cgccgaagcg cttggcgatg
      961 ccgcgcacct cgaggctcgg cggcggacct agcggtgcag gggcaatttc cgccaagctc
     1021 aaccggccct ccccagaacg cggcgatgcg gtggcgccgc tcatgtggcg ccaccgcgtc
     1081 cggttacttc gagaccgacg cgatgagatc ggcggcggcc tggacgttgg tcttgtcgta
     1141 ggtctgcagc tcgcccatca ccagcgtgcc attgtctccg atcgtcagct tgcccatgcg
     1201 gccggcgtcg acgacgtcgc ccttggcacc ggtaatctgg cccttcacca gcgcgtccgt
     1261 caccttcatg gtggtgtagc cgacatcgac catgttccag atcgcgaagg ccggcgtggc
     1321 gccgtcgagg acatgatcga ccatctcatt ggggaagcct agtccggtga cgacgacctt
     1381 gccaatgagg tgctggtctt cgaccatctt ggacgccgcg gcgatggcga ccgaggagta
     1441 ggcgatgatg gccttgaggt tgggatattt cgagaccagc ccgagcgctt cgttgtaggc
     1501 cttgtcggac ttctcgtcgc cgtaggtgac ctcgtcgacc gtgatgccct tgtagtcggg
     1561 gtcgttcttg gtcaggtcgg tcatcttgtt gacccagtcg ttctgggtgg tcgagtccgc
     1621 ggcgccggag atgacgccga tctcgccggt gccgatcagg ttcttgacga tcttgagcgg
     1681 ggcgagggcg atgagatcgt tggtggcttc ggcgacgaac accgagcggc ccgagggatc
     1741 gagatcctga tcccacgaca ccaccttgat gccgcgctgc tgggcgcgct gcagcgccgg
     1801 aagcagcgcc gtctggtcgt tggcggtgat catgatggcg tcgacgtgct ggtcgaccag
     1861 cgagtcgatc tgcgcgatct ggccctcggc ggtgttctcg gtcgggccgg tgtagatcag
     1921 gtccaccccg agctccttgg ccgcttgctc ggcaccgacg tgggcgagct cgaaggcggt
     1981 gttgcccagc acgcgcacca gcatggcgta gcgcggcggt gccgcagtgc tgacggccgt
     2041 catcgacgtg ccgagcacga gactggtcgc ggctaccgcg acggcttgaa tgatccaacg
     2101 gcgcttcatc gcgattattc ctccctctgg ggttctgatg aacctgtgcc ggcaagtctt
     2161 gacggtcggc agttccggct ggttttccga cccgtagctc aaattttcag ggctccaccg
     2221 gattgtcaac acgattgttg acaatcttgc gaacaatctt caggcgtgtt tatgtcgaac
     2281 cggcgcttcg cccggggcgc ccacaaggag accagccaaa tggggttttc gccacgacgc
     2341 atcgtcacgg ccacggatcc ggacggacgc tcctatttca tgatcgatgg tccggcgggg
     2401 aacgtgctcg aacagcccgg gcgcggattg accttccacg agatgtggat caccgacggg
     2461 ccgctggcct ccaatgccgg cacggccgac gccgccgcgg tgccggtgga gcatcatccg
     2521 ccgcatggcg gctcgcgcat tcgcatcgtc gagttcctgc ccgacacgca gcgcgaaagc
     2581 ggccaggcgg cggcggattt cgccgcggtc ggggcgagcg agcgggtcgt cggcgacgtc
     2641 gatgacggca tgcatcgcaa cgataccgtc gactacaaca tcatcctacg cggcgagatc
     2701 catgcgtgca ccgacgccgg cgagctgttg ctccgcgccg gggacgtgct gatccagcgc
     2761 ggcaccaagc acacctggcg caatcgcagc gacagcccgt gcatcttcgc ctcgatcatg
     2821 atcagcgccg agccactcgg cccgactgaa ccctgaaccc acgcggaccg gatcgcaccg
     2881 atgagccaag atctccagct tcccgtcgac aatctccggc gcttcctcgt cgagctgttc
     2941 agccgggtcg gcatgagcgc cgaaaacgcc acctactcgg ccgagtgcct catcctcacc
     3001 aatctgtggg gcatcgattc gcacggcgtg ctgcgcgtgc cgatctacgt gcaacgcctc
     3061 gccggcaacg tcatcaaggc caatccggag gtgcgcaggg tcgccggcaa gcatgcgttc
     3121 gaggtgctgg acggcgacaa cggcatgggc ttcgtcgtcg gccgcgtggc gatggcgcgc
     3181 gccgttgaac tggcgaaggc gcacgggatc ggcgcggtga gcgtgcggtc gagcaatcat
     3241 ttcggcgcgg cgtcgctgtt cgcgcggatg gcgaccgacg cgggcctcgt cggcatcgcc
     3301 atgaccaacg tcatccccaa cctcgtcgtg cccggcggca gcaagccgat caccggcaac
     3361 aatccgctcg ccttcggcgt gccgtcggcc gaaccgtttc cgttcatgct cgatatctcg
     3421 atgtcgtc
//
LOCUS       DATAZA010000136         6271 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1639234, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000136 DATAZA010000000
VERSION     DATAZA010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6271
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1639234"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..356)
                     /locus_tag="VHZ56_03415"
     CDS             complement(<1..356)
                     /locus_tag="VHZ56_03415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HEX4297045.1"
                     /translation="MPIKKILVANRSEIAIRVFRAANELNIKTVACYAEEDKLALHRF
                     KADEAYLIGKGKGPVEAYLQIGEYIRVARLAGADAIHPGYGLLSESPEFAEACEDAGI
                     IFIGPRPQTMRDLGNKV"
     gene            complement(418..834)
                     /locus_tag="VHZ56_03420"
     CDS             complement(418..834)
                     /locus_tag="VHZ56_03420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family sulfur transferase"
                     /protein_id="HEX4297046.1"
                     /translation="MDVKRINEHVSVSPQISPDDVAQIKAAGFTTIINNRPDGESPDQ
                     PSSATMAAAAKAAGLDYRYIPLGRDGVNPQMVEDTKAALEGSPGPVFCYCRSGTRSTT
                     LWALSQAGKLPAQEIVEAAAHAGYDMSHLLGHLSQK"
     gene            complement(915..1952)
                     /locus_tag="VHZ56_03425"
     CDS             complement(915..1952)
                     /locus_tag="VHZ56_03425"
                     /inference="COORDINATES: protein motif:HMM:NF015995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX4297047.1"
                     /translation="MSRIFWCLALVLLLAAPAVAQDIVSLPPPDSTEPSSSEPPGPPP
                     PCGGQTITIAKMQWPSAELLAEIHARLIKQAFGCDVEVVPGDLASTASSMGVNGQPAV
                     APELWISRVADIWNNSLQGQEVREAGTTYAEPVFEGWFVPDYVVAAHPDLTNVAALKT
                     YWKEFAGTGKKAKFISCPPDWACSVINRNLIRANGLEDLFDIVEPANRFELDTLIAAA
                     VSRKEPILFYYWQPNAVLAQFNFKPIDLGPFNKDNFVCLGRTACADPKPSGFDPEPVV
                     VALAQWVYLDAPEVAAYFARAHMPFAEMNALLQNLNEPGATVEAVADAFVAARGAVWQ
                     QWVGKPVPAAQ"
     gene            2178..3389
                     /locus_tag="VHZ56_03430"
     CDS             2178..3389
                     /locus_tag="VHZ56_03430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4297048.1"
                     /translation="MNKVNKLLGLAAAASLLVAAAPTMAADVKLGFIGGFTGPIESLT
                     PPIFNGAKLALQNINDQGGILDGGKLTIESADGGCDSTTAANAADKLINSSKVTAIVG
                     GLCTGETIGAFNGSGKPGNVVFVSPASSAPALTTLDDNDLVFRTTPSDALQGVKMASL
                     LISKGVKNVVITYVNNDYGKGLNDAFAAAFKADGGTVDADVAHEDSKADYRAELGQLS
                     ATGDQNLVILAYANSSGHTILQQAAESGDFKAYFGGDGMVGDTLTKGIDPASVKGLIA
                     TRAGAPAGAGTDAFNALAKTASVDPTGTYVPQAYDAAFLLALAIEKNGKDSRDGLSTA
                     LRAIASGKGEAILPGQWKEAVADIKAGKDIHYSGAGGDLTFDKAGDVDGIINWLQVDD
                     KGAFVDQGPIK"
     gene            complement(3454..4746)
                     /locus_tag="VHZ56_03435"
     CDS             complement(3454..4746)
                     /locus_tag="VHZ56_03435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019998495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX4297049.1"
                     /translation="MNGRVTRAVGLYAGLVVLIIAVALLNGAPYATRLLVEAGAYALI
                     VLGLNIQWGYGGLFNFGIMGFLMVGGAAVTFISYPLNGVFWNSDGPMLLGRAIIAAAI
                     AALLIVGARQAHRIGIRGGWKTALVTLAWFAGYIIFRSQMDPAVAYVLANGGWVGGLG
                     LPVIWGWVFGGLVAGGIAYIIGRICLGLRSDYLAIATIGISEILRQLIKNNQWLTRGT
                     LTVSPIKWPTPLPQDYQAMGVDTQTSLLYARGGFFLVVAAIIAVVMFLLARAYHGPWG
                     RMMRAIRDNYIAAGSMGKNVTARQLEIFVLGSVLIGVGGAILVSFTQIFDPNSYQTIN
                     HTFFIWVMIIVGGAGNNWGALFGAVFIYVVWLLSEPLAQGLFSVISYWSTQIGWGAIP
                     DVESRSLQMRVFVLGLVITVALRYAPRGLIPETAQTSR"
     gene            complement(4743..5741)
                     /locus_tag="VHZ56_03440"
     CDS             complement(4743..5741)
                     /locus_tag="VHZ56_03440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX4297050.1"
                     /translation="MDALIFFFNKVLVTGTVEGSVYALGAIGVTLIFGILRFAHFAHG
                     DMMTMGAFVAFMLALLLATTGVTFPVPTGFVVLPVAMAITAVIALGLDKGFYAPLRKR
                     GARPVTLLIASIGVTLVIQGLIRLFFGVDTRSFFEHESKGIIRIPTDAIGGSRDITFT
                     QPQILMIGLTIVLCVALHLFLTRSRLGKAMRAMADNPDLAQVSGINTALVVRVTWIIA
                     GALACCGGTMLALDVSLTPDLAFNIELSIFAAAIVGGLGQAYGAIAGGFLIGFAETLA
                     VFDWSVLLKPLQGFIPFPITTGLALVPTEYKLSVSFVILVIVLLARPTGIFKGASS"
     gene            complement(5748..>6271)
                     /locus_tag="VHZ56_03445"
     CDS             complement(5748..>6271)
                     /locus_tag="VHZ56_03445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4297051.1"
                     /translation="FDGQEITNAVPDKLVPMGLSFVPQEKNVFTSMSVEENLEMGAFI
                     RRDDFSDTLDEVYGMFPVLKEKRRQPAGELSGGQRQMVAMGRALMSKPRLLMLDEPSA
                     GLSPRYVLEIFEKIVAVNKAGVGILMVEQNARQALAFATRGFVLAQGQNRFTGTGAEL
                     IADPDVAKSFLGG"
BASE COUNT         1148 a         2186 c         1970 g          967 t
ORIGIN      
        1 accttgttgc cgaggtcgcg catcgtctgc ggccgcggcc cgataaagat gatgcccgcg
       61 tcctcgcagg cctcggcgaa ctccgggctt tcgctcagca ggccatagcc cggatggatc
      121 gcatcggcgc cggcaagccg cgccacgcgg atgtattcgc cgatctgcag gtaggcctcg
      181 accggcccct tgcccttgcc gatcaggtac gcctcgtcgg ccttgaagcg gtgcagcgcc
      241 agcttgtcct cttcggcgta gcaggcgacg gtcttgatgt tgagctcgtt ggcggcgcga
      301 aacacgcgga tggcgatttc gctgcggttc gcgacgagga tcttcttgat cggcatggcg
      361 ggtttccgat ggagagggga tagtcggaaa agcaaaaggg agcccgcggg ccccctccta
      421 tttctggctc aggtgaccca gcagatggga catgtcgtag ccggcatgcg ccgccgcctc
      481 gacgatctcc tgcgccggca gcttgccggc ctggctcagc gcccacagcg tcgtcgagcg
      541 cgtgccggat cggcagtagc agaacaccgg gcctgggctc ccctcgagcg cggccttggt
      601 gtcctcgacc atttgcgggt tcaccccgtc gcggccgagc gggatgtagc ggtagtcgag
      661 accggcggcc ttcgccgccg ccgccatcgt tgccgacgac ggctggtcgg gcgactcgcc
      721 gtcgggacgg ttgttgatga tggtggtgaa cccggcggct ttgatctggg cgacatcgtc
      781 cgggctgatc tgcggggaca cgctgacgtg ctcgttgatc cgcttgacgt ccaaaaaccg
      841 aactcccgat aacgccctgg cttcccgccg gcctttatag acggcgcggt cgcggggacg
      901 caacagcgcc ggcgctactg cgctgccggc accggcttgc cgacccattg ctgccagacg
      961 gctccccggg ccgcgacgaa cgcgtccgcc accgcttcca ccgttgcacc cggctcgttg
     1021 aggttctgca gcagcgcatt catctccgca aagggcatat gtgcacgcgc gaaatacgcc
     1081 gccacctccg gcgcatcgag gtagacccac tgcgccagcg ccaccaccac cggctccgga
     1141 tcgaaccccg acggcttcgg atcggcacag gcggtgcgcc cgaggcagac gaagttgtcc
     1201 ttgttgaacg gccccaggtc gatcggcttg aagttgaact gcgccagcac cgcattgggc
     1261 tgccagtagt agaacaggat cggctccttg cggctcaccg ccgccgcgat cagcgtgtcg
     1321 agctcgaacc ggttggccgg ctcgacgatg tcgaacagat cctccaaccc attggcgcga
     1381 atgaggttcc ggttgatcac cgagcaggcc cagtcgggcg ggcaggagat gaatttcgcc
     1441 ttcttgccgg tcccggcgaa ctccttccag tacgtcttga gcgccgcgac attggtcagg
     1501 tccggatgcg ccgccaccac gtagtcgggg acgaaccagc cctcgaacac cggctcggca
     1561 taggtcgtgc cggcctcgcg cacctcctgg ccctgcagcg aattgttcca gatgtcggcg
     1621 acgcggctga tccacagctc cggcgccacc gccggctggc cgttgacccc catcgaggag
     1681 gccgtcgacg ccaggtctcc gggcaccacc tcgacatcgc agccgaaggc ctgcttgatc
     1741 agccgggcgt ggatctcggc cagcagttcg gccgacggcc actgcatctt ggcgatggtg
     1801 atggtctgcc cgccacaggg cggcggcggc ccgggtggct cggacgacga cggctccgtg
     1861 ctgtccggcg gcggcagtga aacgatgtcc tgcgcgaccg ccggggcggc cagcagcagc
     1921 accagcgcca ggcaccagaa aattcgggac attcaggctc gccgctcgct ccaccggccg
     1981 aaccctaagc tctcccgtcg ctcttaagca atgcggccaa acgttttgac cggccgatca
     2041 aatccggatg actcatgatt acgaattatg caatatcgcc cgcagcggag ggcctttggg
     2101 gccctcccga caagatgttg cccatccgaa caaggcccaa aggccgccgg aacgggcaac
     2161 cattgcagag ggacatcatg aataaagtca acaaactgct gggccttgca gccgcagcat
     2221 cgctgctcgt cgcagccgct ccgacgatgg ccgcagacgt caagctcggc ttcatcggcg
     2281 gcttcaccgg cccgatcgaa agcctgaccc cgccgatctt caacggcgcc aagctcgcgc
     2341 tgcagaacat caacgaccag ggcggcatcc tcgacggcgg caagctgacg atcgagtccg
     2401 ccgacggcgg ctgcgattcg accaccgccg ccaacgccgc cgacaagctg atcaacagct
     2461 ccaaggtgac cgccatcgtc ggcggcctct gcaccggcga aaccatcggc gccttcaacg
     2521 gctcgggcaa gccgggcaac gtggtgttcg tgtcgcccgc ctcctcggcg ccggccctca
     2581 ccaccctcga cgacaacgac ctcgtcttcc gcaccacgcc ctccgacgcg ctccagggcg
     2641 tgaagatggc ctcgctgctg atctccaagg gcgtcaagaa cgtcgtcatc acctacgtca
     2701 acaacgacta cggcaagggc ctcaatgacg ccttcgccgc cgccttcaag gccgatgggg
     2761 gcaccgtcga cgccgatgtc gcgcacgaag acagcaaggc cgactaccgc gccgaactgg
     2821 gccagctctc ggccaccggc gaccagaacc tggtgatcct cgcctacgcc aactcctcgg
     2881 gccacaccat cctgcagcag gccgccgagt ccggcgactt caaggcctat ttcggcggcg
     2941 acggcatggt cggcgacacg ctgaccaagg gcatcgaccc ggcctcggtc aaggggctca
     3001 ttgccacccg cgccggcgct ccggccggtg ccggcaccga cgccttcaat gccctcgcca
     3061 agaccgccag cgtcgatccg accggcacct acgtgccgca ggcctatgac gcggcgttcc
     3121 tgctcgctct ggcgatcgaa aagaacggca aggacagccg cgatggcctc tcgaccgcgc
     3181 tgcgcgccat tgccagcggc aagggcgaag ccatcctgcc cggccagtgg aaggaagccg
     3241 tggccgacat caaggccggc aaggacatcc attattccgg cgccggcggc gacctgacct
     3301 tcgacaaggc cggcgacgtc gacggcatca tcaactggct gcaggtggac gacaagggtg
     3361 cgttcgtcga ccagggcccg atcaagtgat ctgacggccg acagcaattc ttgaaagccc
     3421 gggctcgcgc ccgggctttt tgctgtgccg cgcctagcgg ctggtctgcg ccgtttcggg
     3481 gatcaggccg cgcggcgcgt agcgcagggc gacggtgatc acgaggccga gcacgaacac
     3541 ccgcatctgc agcgaccggc tttcgacatc ggggatcgcg ccccagccga tctgcgtgct
     3601 ccagtagctg atgacggaaa acagcccctg cgccagcggc tcgctcagca gccacaccac
     3661 gtagatgaag accgcaccaa acagtgcacc ccagttgttg ccggcgcccc cgacgatgat
     3721 catcacccag atgaagaagg tgtggttgat cgtctggtag gagttgggat cgaagatctg
     3781 cgtgaacgac accaggatcg ccccgccgac gccgatcagc acggaaccca gcacgaagat
     3841 ctcgagctgc cgcgccgtga cgttctttcc catcgatccg gcggcgatgt agttgtcgcg
     3901 gatggcccgc atcatccgtc cccacgggcc gtgataggcg cgcgccaaaa ggaacatcac
     3961 caccgcgatg atcgccgcga cgaccaggaa aaagccgccc cgcgcataca gcagcgaggt
     4021 ttgcgtatcg acgcccatcg cctggtagtc ctgcggcagc ggcgtcggcc atttgatcgg
     4081 cgacacggtc agcgtgccgc gggtcagcca ctggttgttc ttgatcagct ggcgcaggat
     4141 ttccgagatg ccgatggtgg cgatggcgag gtagtcgctg cgcagcccca ggcagatgcg
     4201 gccgatgatg taggcgatgc cgccggcgac gaggccgccg aacacccagc cccagatcac
     4261 cggtagcccg agcccgccga cccagccgcc attggcgagg acataggcca cggcggggtc
     4321 catctgcgag cggaagatga tgtagccggc gaaccaggcc agcgtcacca gcgcggtctt
     4381 ccagcccccc ctgatgccga tgcgatgcgc ctgccgcgcg ccgacgatca gcagcgccgc
     4441 gatcgctgcc gcgatgatgg cgcggccgag cagcatcggt ccgtcggagt tccagaacac
     4501 cccattgagc ggatagctga tgaacgtcac ggcggcgccg ccgaccatca ggaatcccat
     4561 gatgccgaag ttgaacagcc cgccatagcc ccactggatg ttgaggccga ggacgatcag
     4621 tgcgtacgcc cccgcctcga ccagcaggcg cgtggcgtag ggcgccccat tgagcagggc
     4681 gacggcaatg atgagcacca ccagccccgc atagaggccg acggcgcggg tcacccgacc
     4741 gttcatgacg acgctccctt gaagatcccg gtcggtcggg ccagcagcac gatcacgagg
     4801 atcacgaacg acaccgaaag cttgtattcg gtcggcacca gcgccagccc cgtcgtgatc
     4861 gggaacggaa tgaacccctg cagcggcttc agcagcaccg accagtcgaa taccgccagc
     4921 gtctcggcaa agccgatcag gaagccgccg gcgatcgcgc catacgcctg ccccagtccg
     4981 ccgacgatgg ccgccgcaaa gatcgacagc tcgatgttga acgccaggtc cggcgtcagg
     5041 ctcacgtcga gcgccagcat ggtgccgcca cagcaggcca gcgcccccgc gatgatccag
     5101 gtcacccgca ccaccagcgc cgtgttgatg cccgagacct gcgccaggtc ggggttgtcg
     5161 gccatggcgc gcatcgcctt gccgagccgc gagcgcgtca ggaacagatg cagcgccacg
     5221 cacagcacga tcgtcagccc gatcatcagt atttgcggct gggtgaacgt gatgtcgcgc
     5281 gacccgccga tcgcgtcggt cggaatgcgg atgatgcctt tgctctcgtg ctcgaagaag
     5341 ctgcgggtgt cgacgccgaa aaacaggcgg atgagcccct ggatcaccag cgtcacgccg
     5401 atcgacgcga tcagcagcgt caccggtcgc gccccgcgtt tccgcagcgg cgcgtagaac
     5461 cccttgtcga gaccgagcgc gatcaccgcg gtgatggcca tggcgaccgg cagcaccacg
     5521 aaaccggtcg gcaccggaaa cgtcacgccg gtggtggcga gcagcagcgc cagcatgaag
     5581 gccacgaagg cccccatggt catcatgtcg ccatgtgcga aatgcgcaaa ccgcaggatg
     5641 ccgaagatca gcgtcacccc gatcgcgccg agcgcataga ccgagccctc gaccgtgccg
     5701 gtcaccagca ccttgttgaa aaagaagatc agagcgtcca tcggctgcta accccccaaa
     5761 aagctcttgg cgacgtcggg atcggcgatg agctccgccc cggtgccggt gaagcggttc
     5821 tggccctgcg ccagcacgaa gccgcgtgtc gcgaaggcca gcgcctgccg ggcgttctgc
     5881 tccaccatca ggatgccgac ccccgccttg ttgaccgcca cgatcttctc gaagatctcc
     5941 agcacgtagc gcgggctgag gccggccgac ggttcgtcca gcatcagcag gcgcggcttg
     6001 ctcatcagcg cccggcccat cgccaccatc tgccgctgtc cgccgctgag ctcgcccgcc
     6061 ggctgccggc gtttctcctt gagcaccggg aacatgccgt agacctcgtc cagagtatcg
     6121 gagaaatcgt cgcggcggat gaacgcgccc atctcgagat tttcctcgac gctcatcgag
     6181 gtgaaaacgt tcttctcctg cggcacgaag ctcaggccca tcggcacgag cttgtccgga
     6241 acggcgttgg tgatctcctg gccgtcgaag a
//
LOCUS       DATAZA010000137         1769 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2219250, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000137 DATAZA010000000
VERSION     DATAZA010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1769
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2219250"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1068
                     /locus_tag="VHZ56_03450"
     CDS             <1..1068
                     /locus_tag="VHZ56_03450"
                     /inference="COORDINATES: protein motif:HMM:NF024117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HEX4297052.1"
                     /translation="REVLLAYAERVGSSPALPSRLLQRLDAFIGETAATALRGRGQRW
                     LEEAAAADFSGPPRPAQRPMPRPPAALRPRRLSITEIEPLMRSPYDTYARHVLHLRRY
                     EPLGAEVGPRERGTMIHTVFEQFVTAGFDFAAPDALAQMTRLAQQAFANLDAIGEKRD
                     IWLERFERAAEQFLDWERQREAEIAERVAESKGEWAFPLLDGFVLVGKADRIDRRHDG
                     RLEILDFKTGGVPASKDMTAFEAPQLLLEAAMARAGAFPGVARLDSAALTYLKIGLGP
                     AALQIKPFRLRDGMDLMTAVDEIVRRLQLHVDTLLLRDGLAMTARVRPRVETGRKSWP
                     GEFDHLARTDEWTLTAGVDDP"
     gene            1065..>1769
                     /locus_tag="VHZ56_03455"
     CDS             1065..>1769
                     /locus_tag="VHZ56_03455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003589501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEX4297053.1"
                     /translation="MSRRLLDPMPESIVGSQRAASDPRGSVWVSANAGSGKTYVLTAR
                     VLRLLLAGARPDEVLCLTYTKAAAAEMRGRVAARLAEWAVDSDVDLVAKLTTLEGAAP
                     SAATMRRARTLFAHALETPGGLRIQTIHAFCESVLHRFPREAGVPFDFTVLEEHERDA
                     MLQTAREQVLAAGVRGQANAAQVETLFGLLSDFSLEQSIVEALGQGRTLRRILPRAGE
                     AKRQLRQIVRARDRETV"
BASE COUNT          244 a          589 c          700 g          236 t
ORIGIN      
        1 cgcgaggtgc tgctggccta tgccgagcgg gtcggctcgt cgccggcgct gccgtcgcgg
       61 ctgctgcagc ggctcgacgc cttcatcggc gagacggcgg cgacggcgct gcgggggcgc
      121 ggccagcgct ggctggagga agcggcggcg gccgatttca gcggaccacc gcggccggcg
      181 cagcggccga tgccgcggcc gccggcggcg ctgaggccgc ggcggctgtc gatcaccgag
      241 atcgagccgc tgatgcgctc gccctacgac acctatgccc ggcatgtgct gcacctcagg
      301 cgctacgagc cgctgggcgc ggaagtcggg ccgcgcgagc gtggaacgat gatccacacg
      361 gtgttcgagc agttcgtcac cgccgggttc gacttcgcgg cgcccgatgc gctggcgcag
      421 atgacccggc tggcgcagca ggcgttcgcc aacctcgacg ccatcggcga gaagcgcgac
      481 atctggctcg aacggttcga acgcgccgcc gagcagttcc tcgactggga acggcagcgc
      541 gaggcagaga tcgccgagcg ggtggccgag agcaagggcg agtgggcgtt tccgctgctc
      601 gacggcttcg tgctggtggg caaggccgac cgcatcgacc ggcggcatga cgggcggctc
      661 gagatcctcg acttcaagac cggcggggtg cccgcatcca aggacatgac cgcgttcgag
      721 gcgccgcaat tgctgctcga ggcggcgatg gcgcgggccg gggcgttccc cggcgtggcg
      781 cggctcgaca gcgcggccct cacctacctc aagatcgggc tcgggccggc ggcgctgcag
      841 atcaagccgt tccggctgcg cgacggcatg gatctgatga cggcggtcga cgagatcgtg
      901 cggcggctgc agctgcatgt cgacacgctg ctgctgcgcg acgggctggc gatgacggcg
      961 cgggtgcggc cgcgggtcga gaccgggcgc aaatcgtggc cgggcgaatt cgaccatctg
     1021 gcgcgcaccg acgagtggac gctgacggcg ggagtggacg acccatgagc cggcggctgc
     1081 tcgacccgat gcccgaatcg atcgtgggga gccagcgcgc cgcgtcggac ccgcgaggct
     1141 cggtgtgggt gagcgccaat gccggctcgg gcaagaccta tgtgctcacc gcgcgggtgc
     1201 tgcggctgct gctggcgggg gcgcggccgg acgaggtgct ttgcctcacc tacaccaagg
     1261 cggcggcggc ggagatgcgc ggccgcgtcg cggcgcggct ggcggagtgg gcggtcgaca
     1321 gcgacgtgga cctcgtcgca aagctgacga cgctggaggg ggcggcgccc tctgccgcga
     1381 cgatgcggcg ggcgcgcacg ctgttcgccc atgcgctgga gacgcccggc ggcctcagga
     1441 tccagaccat ccacgcgttc tgcgagagcg tgctgcaccg ctttccgcgc gaggccggcg
     1501 tgccgttcga cttcacggtg ctcgaggagc acgagcgcga cgccatgctg cagacggccc
     1561 gcgagcaggt gctcgcagca ggcgtgcggg gccaggccaa cgcggcgcag gtcgagacgc
     1621 tgttcggcct cttgagcgat ttttcgctgg agcagtcgat cgtcgaggcg ctcggccagg
     1681 gccgcacgct gcggcgcatc ctgccgcgcg ccggggaggc caagcggcag ctgcggcaga
     1741 tcgtgcgggc ccgcgaccgc gagacggtg
//
LOCUS       DATAZA010000138         2284 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1174993, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000138 DATAZA010000000
VERSION     DATAZA010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2284
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1174993"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1629)
                     /locus_tag="VHZ56_03460"
     CDS             complement(<1..1629)
                     /locus_tag="VHZ56_03460"
                     /inference="COORDINATES: protein motif:HMM:NF014851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /protein_id="HEX4297054.1"
                     /translation="MSESRCQFLVALDQCGLELQGPNMRTSTKRLIPARETDAAALGR
                     DSLRYHGWDPDAVRARYEGLDPGQSYELEVIFACERSERRSMAVVAGGLELAPAVELV
                     PAGATIVRLAVPGEAVRSGVLDIALERRSGPDAVVSELRLFGSAAVPPMLTVVGDSRG
                     GLVGTVCDAAYDGLAGAEIVVSWPGGEMRASSGPHGMFHVPLRDSLPTGQHRELTVTA
                     RLDGLTATRQISTRALAQGLRELPVRAARLDLAGEWRFARGRLPDPEAPAWTGAATTG
                     VPGHVAFDGLIPDGGVATLRKTIAVPAGWAGDAVFARFDGAYGRAEVFVNGDYAGTHS
                     AGATSFDVDLTTLLRPGENDLTIVLTEYTPHAVLDYMSWYAHTSLLGLWREAFLFCVP
                     KLHLGPTDVRLDWDEPGRIGAAGLTTDIVNLGTEAQGYRLELSLFDGDRLVHRTSLAG
                     DVPANGSARRQVTLQVPDVEPWSAEIPRLYDLRLSLRTDDGREASYLRRIGFRRVEVR
                     GNQLLVNGAPIRLLGVNRHDARMRTGRSMRDEDLR"
     gene            complement(1863..>2284)
                     /locus_tag="VHZ56_03465"
     CDS             complement(1863..>2284)
                     /locus_tag="VHZ56_03465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF5054 domain-containing protein"
                     /protein_id="HEX4297055.1"
                     /translation="VQPQDDRRLLITLVLRDKTANRMPEASFFSFAPASATDWRYRKM
                     GSWQEAQRTAPRGGGQLQAVQAVEATLGRTRVRATPLDTPLVGPLEWPFMVFNPSPPN
                     LTAGLRFNLHNNKWGTNFPMWWGGTLVARFVVDFETR"
BASE COUNT          344 a          837 c          772 g          331 t
ORIGIN      
        1 acgcaaatcc tcgtcgcgca tcgagcggcc ggtgcgcatg cgcgcatcgt ggcggttgac
       61 cccgagcagc cggatcggcg cgccgttgac cagcagctgg ttgccgcgga cctcgacgcg
      121 ccggaagccg atgcggcgga ggtatgacgc ttcgcgtcca tcatcggtcc gcagcgacag
      181 gcgcagatcg tagaggcggg ggatttcggc cgaccagggc tcgacgtcgg gcacctgcag
      241 ggtgacctgc cggcgggcgc tgccgttcgc cggaacgtcg cccgcgagcg aggtccggtg
      301 caccagccga tcgccgtcga acagcgacag ctcgagccga tagccttgcg cctctgtgcc
      361 caggttgacg atgtcggtgg tgaggccggc ggcgccgatc cggcccggct cgtcccaatc
      421 gagccgcaca tcggtggggc cgagatgcag cttcggcacg cagaacagga aagcctcgcg
      481 ccagaggccc agcagcgatg tgtgggcgta ccagctcatg tagtccagca ccgcgtgcgg
      541 cgtatattcc gtcagcacga tcgtcaggtc gttctcgccg ggccgcaaca gcgtcgtgag
      601 atcgacgtcg aacgaggttg cgccggccga atgcgtcccc gcatagtctc cgttcacgaa
      661 cacttcggcg cggccatagg cgccgtcgaa ccgcgcgaac accgcatcgc cggcccagcc
      721 ggctggaacg gcgatcgtct tgcgcagcgt cgcgacgccg ccgtccggga tgaggccgtc
      781 gaatgcgacg tgtccgggca ctcccgtcgt cgccgctcct gtccacgcgg gagcctccgg
      841 atcgggcagc cggccacggg caaaccgcca ctcccccgca aggtcgaggc gggcggcgcg
      901 caccggcagc tcccgcaggc cctgcgccag ggcgcgcgtg ctgatctggc gggtcgccgt
      961 caggccgtcc agtcgggcgg tgaccgtcag ctcgcggtgc tgtccggtgg gcaggctgtc
     1021 gcgcagcggc acatggaaca tgccgtgcgg gccgctgctc gcccgcatct cgccacccgg
     1081 ccagctcacg acgatctcgg cgccggcaag cccgtcatag gccgcgtcac agaccgtgcc
     1141 cacgagcccg ccccgggagt ctcccaccac ggtcagcatc ggcggcaccg cagccgaccc
     1201 gaacaatcgc agctcggaca ccaccgcgtc cggaccggag cgccgttcca gcgcgatgtc
     1261 gaggacaccc gaccgcaccg cctcgccggg cacggccagc cgcacgatcg tcgccccggc
     1321 cggcaccaac tcgacggccg gtgccagctc gagtccgccc gcgaccaccg ccatgctgcg
     1381 gcgctcggag cgctcgcagg cgaaaatcac ttcgagttca tacgattggc cggggtccag
     1441 tccctcgtag cgggcgcgga cagcgtcggg gtcccagccg tggtagcgca ggctgtcgcg
     1501 ccccagcgcc gccgcatcgg tctcgcgtgc cgggatcagc cgcttggtcg aggtccgcat
     1561 gttcgggcct tgaagctcga ggccgcactg gtccagcgcg accaggaact ggcaccggct
     1621 ttccgacatg cggccccctc ctcagcgagg ccacaggcat ggcctgcggt catcatcgtt
     1681 cccggcaaga cgtcgctccc gccttgccgg cctgcgcctt ccccaaggcg ctgccactgc
     1741 cgattttgtg cgaaaagcgt cgcacccaaa ccggggtcca gcaaggacca gtggtagcag
     1801 agttgttggt gccagtagct cctcagaggg agccagtttg ccctcccgct ctccagccgg
     1861 ctctatcgcg tctcgaagtc gaccacgaac cgggcgacca gcgtgccgcc ccaccacatc
     1921 gggaagttgg tcccccattt gttgttgtgg aggttgaagc ggaggccggc cgtcaagttc
     1981 ggcggcgacg ggttgaacac catgaacggc cactccagcg gcccgacgag cggcgtgtcg
     2041 aggggcgtcg cgcgaacgcg tgtgcggccc agcgtcgcct ctaccgcttg gacggcctgc
     2101 aactgcccgc cgccgcgcgg cgccgtccgc tgcgcctcct gccagctccc catcttgcgg
     2161 tagcgccagt cggtcgcgct cgccggcgcg aagctgaaaa agctcgcctc cggcatgcgg
     2221 ttggcggtct tgtcgcgcag caccagcgtg atcagcagcc ggcgatcgtc ctgcggctgc
     2281 acga
//
LOCUS       DATAZA010000139         3546 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_130482, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000139 DATAZA010000000
VERSION     DATAZA010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3546
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130482"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1241)
                     /locus_tag="VHZ56_03470"
     CDS             complement(<1..1241)
                     /locus_tag="VHZ56_03470"
                     /inference="COORDINATES: protein motif:HMM:NF015022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX4297056.1"
                     /translation="MAKRIAIATIGTLGDVQPFVALALTLQKRGYSVVIGTSQDFEGF
                     ITGHGIEFFSLGGDVQAFLRQAQFDSAMTKSAILYAPALLRDGQKILKEAGKRAWLMA
                     QDADAVVFQNNTTFCIDIAEALGIPALITVFQPLNPTAEFPYFGYGLDPVDPLLFRFN
                     REPFAKSPSVDPMINKLSYTVQKVQQSYWDLPRDRLRRSLGLKPKKKGGFYTSSRGEA
                     LTTLHAYSPTISPAPGDWPDTNIITGFWRLDDISGWQPSPAFAEFLGKGEPPIYLGFG
                     SMMFGAQRNTEIIAKGLKLWGGRAVIGKGWGGVRDDSLPDTVFVLDRAPHTELFKHVK
                     GVVHHGGAGTTHTGLHAGRPSFAVPQFFDQPYWGRLIYELGAGPPPVRLRKITPQLLA
                     AALDDLATTPAYAHAAQAIGD"
     gene            complement(1296..2459)
                     /locus_tag="VHZ56_03475"
     CDS             complement(1296..2459)
                     /locus_tag="VHZ56_03475"
                     /inference="COORDINATES: protein motif:HMM:NF016041.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HEX4297057.1"
                     /translation="MDMSWLTLPNLIAWLLEAVLAFVVSTLLFDALHWLLHRWGRSQN
                     PLLRTFARWHWVHHAFLDRRMQVHRNLVRQNLIFHIIPEYLTSMAGTLVFLLVFPWPP
                     IAVVAAIRTVMLAMTIRDEGMDLNHMSMDRISGQRGLLWVGPSYHAMHHVHPNNFFSS
                     FANVFDLLFGTSSQISGRRFLVTGASGAFGAAMKARIERLGGIVETAKHGVDFSPGNL
                     ARMQEKLDRTDVLVLAHGAKSIDCWNANYTTFAELADAFVAAGRNRLVPPEIWAVGSE
                     AEFHGDMGMASMVDYAASKRAFARRALSYYRSPDVLYRHIVPSAFTSAMGRGPMSAEF
                     AVTLSLFFIRRGFSYVPVTLTTLALWNYFRFVRQTPELSPAAAGLAIDSPAGR"
     gene            2552..3298
                     /locus_tag="VHZ56_03480"
     CDS             2552..3298
                     /locus_tag="VHZ56_03480"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX4297058.1"
                     /translation="MNLAFVIPAYNEQALIGKCVESVLAEVKRSGRTGIEIVVVNNNS
                     TDRTAEVAGAYAGVRVVDEPQKGLVSARDGGFRATTAELVANIDADTIVPPGWLDTVF
                     AAFEAEDRLVCISGPYVYYDLSAWNRFLVSIFYAATYAIYLLNRFVLRVGSVVQGGNF
                     VFRRDAWIAAGGFNRDIKFYGEDTDVAVRLSKVGGVRWTYRLKMLTSGRRLMEEGVIR
                     TGLTYTLNFLWVTISGKPATKDYTDIRPHT"
     gene            complement(3295..>3546)
                     /locus_tag="VHZ56_03485"
     CDS             complement(3295..>3546)
                     /locus_tag="VHZ56_03485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidogalycan biosysnthesis protein"
                     /protein_id="HEX4297059.1"
                     /translation="HFELCYYQAIDFAIAHKLATVEAGAQGEHKLARGYAPAATHSVH
                     WIGHPGLRDAIERFLRQERAAVLREQAMLNELTPFKHHD"
BASE COUNT          609 a         1154 c         1189 g          594 t
ORIGIN      
        1 ttgtcgccga ttgcctgcgc ggcatgcgcg taggccggcg tcgtcgcgag atcgtccagc
       61 gccgccgcca gcagctgcgg cgtgatcttg cgcagacgga cgggcggcgg tccggcgccg
      121 agctcgtaga tcagccggcc ccaatagggc tggtcgaaga actgcggtac ggcaaagctc
      181 gggcgcccgg catggaggcc ggtgtgggtg gtcccggccc cgccgtgatg caccacgccc
      241 ttgacgtgct tgaacaattc ggtgtgcggc gcccgatcga ggacgaacac ggtgtcgggc
      301 aggctatcgt cgcggacgcc gccccagccc ttgccgatca ccgcccgtcc gccccagagc
      361 ttcagcccct tggcgatgat ctcggtgttg cgctgcgccc cgaacatcat cgagccgaag
      421 ccgagataga tcggcggctc gcccttgccc aggaactccg cgaaggccgg ggacggctgc
      481 catcccgaga tgtcgtcgag ccgccagaag ccggtgatga tgttggtgtc gggccagtcg
      541 cccggcgccg gcgagatcgt cggcgaatag gcgtgcagcg tcgtcagcgc ctcgccgcgc
      601 gagctggtat agaagccgcc cttcttcttg ggcttcagcc ccagcgatcg gcgcagccgg
      661 tcgcgcggca ggtcccagta gctctgctgc accttctgca ccgtgtagct gagcttgttg
      721 atcatcggat cgacgctcgg gctcttggcg aagggctcgc ggttgaagcg gaacagcagc
      781 ggatcgaccg gatcgaggcc gtacccgaaa tacgggaatt cggcggtcgg attgagcggc
      841 tggaagacgg taatcagcgc cggaatgcca agcgcctcgg cgatgtcgat gcagaaggtg
      901 gtgttgttct ggaacactac ggcatcggcg tcctgcgcca ttagccaggc ccgcttgccc
      961 gcctccttga ggatcttctg gccgtcgcgg agcagggcgg gggcgtagag gatggcgctc
     1021 ttggtcatgg cgctgtcgaa ctgcgcctgc cgcaggaacg cctgcacgtc gccgccgagg
     1081 ctgaagaact cgatgccgtg gccggtgatg aaaccctcga aatcctgcga ggtgccgatc
     1141 accaccgagt agccgcgctt ctgcaaggtc agcgccagcg ccacgaaggg ctgcacgtca
     1201 ccgagggtgc cgatcgtcgc gatggctatg cgcttggcca tggatgccgt gtcgttcgcc
     1261 gcagcccagc agataggctc tcggtcgagg aaaaactatc tccccgccgg agagtcaatg
     1321 gcgaggccgg ccgccgcggg cgagagttcc ggggtctgcc gcacgaagcg gaagtaattc
     1381 cacaaagcaa gggtcgtaag tgtaaccggc acataggaaa acccgcgccg gatgaaaaac
     1441 aggctgagcg tgacggcgaa ctccgccgac atcgggccac gccccatcgc cgaggtgaag
     1501 gccgagggca cgatgtgccg gtagagcacg tccgggctgc ggtagtagct cagcgcccgc
     1561 cgcgcgaacg cccgcttcga cgccgcatag tcgaccatcg aggccattcc catgtcgcca
     1621 tggaactcgg cttccgaccc taccgcccag atctcgggtg gcaccagccg gttccgtccg
     1681 gcggcgacga acgcatcggc caactcggcg aaggtggtgt agttggcatt ccagcagtcg
     1741 atgctcttcg caccgtgggc cagtaccagc acgtcggtgc gatccagctt ttcctgcatg
     1801 cgcgccaggt tccccggcga aaaatcgacc ccgtgcttgg cagtctcgac gatgccgccc
     1861 agccgttcga tccgcgcctt catggccgcc ccgaacgctc cgctggcccc ggtgacgagg
     1921 aaccgccggc cgctgatctg gctggaggtg ccgaacagca ggtcgaagac gttggcgaag
     1981 gacgagaaga aattgttggg atgcacatga tgcatcgcgt ggtagctcgg tcccacccag
     2041 agcagcccgc gctggccgct gatgcggtcc atgctcatgt ggttgaggtc catgccctcg
     2101 tcgcggatag tcatcgccag catgacggtg cggatcgccg ccaccaccgc gatcggcggc
     2161 cacggaaaga ccagcaggaa caccagcgta ccggccatcg aggtcaggta ctccgggatg
     2221 atgtggaaga tcaggttctg ccgcacgagg ttgcggtgca cctgcatgcg ccggtcgagg
     2281 aaggcgtgat gcacccagtg ccagcgcgcg aaggtccgca gcagcggatt ttgcgagcgg
     2341 ccccagcgat gcagcagcca gtgcagcgca tcgaacagca gcgtcgacac cacgaacgcc
     2401 agcacggctt cgagcagcca ggcgatcaga ttggggagcg tcagccagct catgtccatc
     2461 gtttgcgtcc tctggcccgg cagccccggt tgcccttggg gatgcgatgg tctatcggca
     2521 ctcaccgccc cgttttgcgt gagcccgccg catgaatctg gccttcgtca ttcctgctta
     2581 caacgagcaa gccctgatcg gcaaatgcgt cgaatccgtg ctcgccgagg tgaagcggtc
     2641 gggacggacg ggcatcgaga tcgtggtggt gaacaacaac tcgaccgacc gtaccgccga
     2701 ggtcgccggt gcctatgccg gcgtacgggt ggtcgatgag ccgcagaagg gcctggtcag
     2761 cgcccgcgac ggcggctttc gcgcgacgac ggccgagctg gtggccaaca tcgatgccga
     2821 caccatcgtg ccgcccggct ggctggacac ggtctttgcc gcgttcgagg cggaagacag
     2881 gctcgtctgc atcagtggtc cctacgtcta ctacgatcta tcggcgtgga accgcttcct
     2941 ggtcagcatc ttctacgccg cgacctatgc gatctacctg ctcaaccgct tcgtgctgcg
     3001 ggtgggctca gtcgtgcagg gcggcaattt cgtgttccgg cgcgacgcct ggatcgcggc
     3061 agggggcttc aaccgcgaca tcaagttcta tggcgaggac accgacgtcg cggtgcgcct
     3121 gagcaaggtc ggcggcgtcc gctggaccta ccgcctgaag atgctgacct cgggccgccg
     3181 cctcatggag gagggggtga tccgcaccgg gctgacctac accctcaact tcctctgggt
     3241 gaccatctcc ggcaagcccg ccaccaagga ctacaccgac atccgcccgc acacctagtc
     3301 gtggtgcttg aacggcgtga gctcgttgag catcgcctgc tcgcgcagaa ccgcggcgcg
     3361 ctcctgccgc aggaaccgct cgatggcgtc gcgcagcccg ggatggccga tccagtgcac
     3421 cgagtgtgtc gccgccggcg cgtagccgcg ggccagcttg tgctctccct gtgcgccggc
     3481 ttcgaccgtc gccagcttgt gggcgatggc gaagtcgatg gcctggtagt agcagagctc
     3541 gaagtg
//
LOCUS       DATAZA010000140        10686 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2916475, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000140 DATAZA010000000
VERSION     DATAZA010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 10686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10686
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2916475"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            144..473
                     /locus_tag="VHZ56_03490"
     CDS             144..473
                     /locus_tag="VHZ56_03490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016735697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6665 family protein"
                     /protein_id="HEX4297060.1"
                     /translation="MAYLLPDRFALARQSDAAFNLLEEDMVAEKASSLGHRGRQVEAA
                     MAALRGFDAAPGEPEERRALVRRAAREVWAFFVQRELCGLRDQKDVIRQYGIPGEVLV
                     RLGAIEK"
     gene            complement(494..949)
                     /locus_tag="VHZ56_03495"
     CDS             complement(494..949)
                     /locus_tag="VHZ56_03495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4297061.1"
                     /translation="MSLTYRAATPGDLPFIIALVIEDGIVATDDSVADAMRPEYVGAL
                     AEITADPHQEMIVVERDGAPVGCFQLSYIPGLMRRGMKRGQIELVHVAEAKRNSGIGS
                     DMMRWAIERCRQHGCGLVQLTSNKQRSAAHRFYARLGFIQSHEGFKFYL"
     gene            1045..1359
                     /locus_tag="VHZ56_03500"
     CDS             1045..1359
                     /locus_tag="VHZ56_03500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1272 domain-containing protein"
                     /protein_id="HEX4297062.1"
                     /translation="MPALELRPNCELCDRDLPPQTREARICSNECTFCAACADDVLHD
                     VCPNCGGELVRRPIRPMEAYRPGEGLRLNPAGTTRRHTKYSQDEIAALVARLRDVPAD
                     RR"
     gene            complement(1362..2906)
                     /locus_tag="VHZ56_03505"
     CDS             complement(1362..2906)
                     /locus_tag="VHZ56_03505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEX4297063.1"
                     /translation="MSFAPATMPWFAINEWRLMWRDGVAMMTAGRPTRRTALIVVLAI
                     AAVLLHLMANAIVGPWIAHGVIADKPTLVLVTGSGFLFWTVMLSQALESVTRAYYARA
                     DLDLILSSPASSRTLFAVRTGITALTTLLLACLLASPIIDVLVLHDGPRWLLAYLVLA
                     ALSALATALAVLVTVALFRLAGPQRTRLIAQIIAAIVGAGFVIGIQAIAILHFGNMSS
                     RFALFSDPQFVAAMPANNSFVWAPARAALGDLPALLGVVVLGFAALAATIAMASTGFG
                     RNAIAAAGVSHTRVAQRHGTVRFQPRSQKQQLRVKEWKLLARDPWLLSQTLMQVLYLV
                     PPALYLWISYGQSAGTYVVVIPVLVMATGQLSGGLSWLAISGEDAHDLVVTAPVSPGT
                     VLQAKIEAVATVVLVVLTPIIVLMMFASFQLAAATAVFAALSSGSATAIQLWFRVPMR
                     RAMFRRRQVASRVSTIAEALSSIFWAGTAVLTAGDQYLIALLPAVLATVTLFVAWTLS
                     PKGKRV"
     gene            complement(2903..3676)
                     /locus_tag="VHZ56_03510"
     CDS             complement(2903..3676)
                     /locus_tag="VHZ56_03510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009757610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4297064.1"
                     /translation="MADPVLALDIEGLSKSFDRPVVKDLRLAVKGGEFYALLGPNGAG
                     KTTILRMVAGLLQPEAGSISVFGIDTRKDPLRAKSIVAWVSDEPMVYDRLTPYEYLEF
                     VAGLWQVEARQAQARATELIGWLGLAPHAHERCGGFSKGMLQKVALAGALVHDPKLII
                     LDEPLTGLDAGSARQVKQVLLDKVRQGVTVIMTTHILEVAERMAERIGVINHGRLIAE
                     GTLAELRTRVGRETTLEEIFLDLVAQKEMDADPALGAAA"
     gene            complement(3806..4729)
                     /locus_tag="VHZ56_03515"
     CDS             complement(3806..4729)
                     /locus_tag="VHZ56_03515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008876712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease"
                     /protein_id="HEX4297065.1"
                     /translation="MAPTAAQSKLTGTLTATQACPAVQSIKKATNPGNVTLAIGTSYK
                     VIGGNTASPTYYWIVVPGATPDFRWVAVTCGTADVQAAAPTAPAAGKTQFVLAASWEP
                     AFCEGQSGKPECKAETATSFEADHFALHGLWPQPRSNSYCSVDAADEASDKAGHWSSL
                     PAVTLNADTRAELDKVMPGTQSALERHEWLTHGTCYGADQQHFFTDALTAMSALNASP
                     VRDLFASHVGQQLSQDDIRAAFDKAFGAGAGERVRIACETDGSRRIIGELTIGITGKI
                     DKPEGIGALILAAAPTSGGCTGGIVDAVGLQ"
     gene            complement(4854..5966)
                     /gene="cfa"
                     /locus_tag="VHZ56_03520"
     CDS             complement(4854..5966)
                     /gene="cfa"
                     /locus_tag="VHZ56_03520"
                     /EC_number="2.1.1.79"
                     /inference="COORDINATES: protein motif:HMM:NF008686.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane fatty acyl phospholipid synthase"
                     /protein_id="HEX4297066.1"
                     /translation="MTEKDRIVGLLKDAGVTVNGPDAWDLQIHDERMWNRLFAEGSLG
                     FGEAYMDGWWDAADLAEMFNKILTGGVADKLKVTPNLLWQIAQAKLLNMQTVARSRRV
                     AAMHYNETDAYKASLDKRMTGSCGYWPEGVTNVDEAQEAKLDLVCRKIQLKPGELVWD
                     IGCGWGAFMGFAAEKYGARCVGVTVSPDQAAYGRERYKDLPIEFRVQDYREFEGKTDK
                     VVSMGMFEHVGHKNYRTYFEKARQVVKDDGLFMMHSIGSQWSTDTIEPWLEKYIFPGG
                     VIPSMAQIGKAIDGLWSVVDVHNIGPHYDRTLVAWYDNFNAKWKKDRTPEEERFFRLW
                     KYYLLCCAGGFRARALQVWQFVLSPTGVPDGYKFAR"
     gene            complement(6101..6568)
                     /locus_tag="VHZ56_03525"
     CDS             complement(6101..6568)
                     /locus_tag="VHZ56_03525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297067.1"
                     /translation="MTLPRLLLLSVIFALPSAGTFAADICGDLDSLIATDSDFSSLRG
                     AKSGDGAWKSTLTVTGFDSCTVSTYKDKLIFNCLKESDSRDVMLVDLGKLADATWACP
                     HVTSRNYDEYKDLSYQIGWGFFIGDSEQAQMAGMADMFNDGKFQVELTMFETD"
     gene            complement(6581..8533)
                     /locus_tag="VHZ56_03530"
     CDS             complement(6581..8533)
                     /locus_tag="VHZ56_03530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297068.1"
                     /translation="MATARRLYELLRGQHLPVTDGSAQASEPPQLDVYFDQAAPGVED
                     WKSVHEPYLKRSRAMLVICTPGSKLVEGDRDWVHKEIDWWLGNRQMAPILVDPLGEGA
                     RYIPDAIEKRWHDAQRIRIIENEWAKFDPAELKSANERVSAQIMGAIVPSGRNFYRQE
                     FEAEQKRTAELHAALDRQRATSRRLVWAIGGMAVVVLFAIAAVVYAFLQTQEAHRQTD
                     AADQARKDAVLALNRLRTSDLRDEVLTAQQLLASGNFVQAIEAAAALRTEVANPRSPI
                     ADQAAAVDIVIVEAANDLVVPAVCNGPREMASVQFSDTASSVVAALADDSMIRWTLPA
                     CGDSAPVYQHEDRIAGMAWSPAGDLASAAWDRMVRIQSTTGSAVARLASGHGRIIRVQ
                     YPASGPLEVLTNGGDVIAVAPGTAPDTLDETPMPMPEKTAARDLLHGIAFLDDGGKAA
                     FYDPLSKRLTGPFDLDAETTVLRSAAPDGQHFVVVEKDGSAWLLGQDRAATTLGTQGG
                     DPVGLSISPDGRTAVTHTDNDIAFYRLDGPPAQHPYHLFSGKTETALAVSPDLFLASG
                     EDGTVELVDAARGSPVWQVKGDQYSAATVTLSPHGDYVAIAQPDGGLGVRRLLTTADD
                     AMTYYCTVLTKASTTPSKACPAPAAQ"
     gene            8704..9633
                     /locus_tag="VHZ56_03535"
     CDS             8704..9633
                     /locus_tag="VHZ56_03535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020011315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HEX4297069.1"
                     /translation="MVKWQGREESSNIEDRRGQGGIGGGGGLGGGFNPGGFGGGGFRL
                     PSGRSGMSMGGIAVLVVFVLIAMAFGINPIDLLTGSDTSQSSSASTQTTLPPQNATED
                     DLRQFVGVVVKDTETFWTGYFQQHGGTYTDPKVVLYSGQTQSGCGTADSSAGPFYCPV
                     DQKVYIDLSFYQQLRDQFGAPGDFAQAYVIAHEVGHHVQDLLGILPAFNKARQTLTQD
                     QANAYSVKIELQADCFAGMWGQGEFKQGYLDDGDVQEAINAANQIGDDTLSQNTISPR
                     QYTHGSSAQRMQWFKTGYQATDVHQCDTGLPAY"
     gene            9873..10154
                     /locus_tag="VHZ56_03540"
     CDS             9873..10154
                     /locus_tag="VHZ56_03540"
                     /inference="COORDINATES: protein motif:HMM:NF024600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297070.1"
                     /translation="MKKIALLAVMGLVAGGLAAPVLAATNEDSFQRADANKDGVVSWD
                     EAIGVYPTLTQTLFQQADANGNKTLDEGEFSVLQGLSAGLSDTSKQSNG"
     gene            complement(10203..>10686)
                     /locus_tag="VHZ56_03545"
     CDS             complement(10203..>10686)
                     /locus_tag="VHZ56_03545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014489472.1"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEX4297071.1"
                     /translation="PDGIFLSNGPGDPAATGKYAVPTIKALMDTGKPIFGICLGHQLL
                     GLAVGGQTGKMHQGHHGANHPVKDLTTGKVEITSMNHGFAVVSQSLPAGITQTHVSLF
                     DGSNAGLSVDGKPIFSVQYHPEASPGPHDSHYLFTRFLNQVRSQKGLALKPERTALQS
                     "
BASE COUNT         1760 a         3294 c         3886 g         1746 t
ORIGIN      
        1 acgccgccca gcgacttgac cgggtagatc cagagttcgc ggatgaagat gtcgaccaat
       61 ggcgcctcgc tcgaagcctg ttagcggatt tgcggcggga agggaaattg ccgagcggcg
      121 gaggagtttg tagagtgcgg atcatggcct atctgctccc cgaccgtttc gccctcgccc
      181 gccagtccga cgccgcgttc aacctgctcg aagaggacat ggtggccgaa aaggcctcct
      241 cgctcggtca tcgcggacgg caggtcgagg cggcgatggc ggcgctgcgg gggttcgacg
      301 cggcccccgg cgagccggag gaacgtcggg cgctggtgcg ccgggcggcg cgcgaggtgt
      361 gggcgttctt cgtgcagcgc gagctctgcg gcctgcgcga ccagaaggac gtcatccgcc
      421 agtacggcat cccgggcgaa gtgctggtgc ggctcggcgc gatcgagaaa taggctcgag
      481 cgagactgcc gcgtcagaga tagaacttga agccttcgtg gctctggatg aagccgaggc
      541 gggcgtagaa ccggtgcgcc gcggagcgct gcttgttcga ggtgagctgg acgaggccgc
      601 aaccgtgctg gcgacagcgc tcgatggccc agcgcatcat gtccgagccg atgccggaat
      661 tgcgcttcgc ttcggcgacg tggaccagct cgatctggcc gcgcttcatg ccgcgccgca
      721 tgaggccggg aatgtagctc agctggaagc agccgacagg cgcgccgtcg cgttcgacca
      781 cgatcatctc ctggtggggg tcggcggtga tctcggcgag ggccccgacg tactccggac
      841 gcatggcgtc ggcgacgctg tcatcggtgg cgacgatgcc gtcctcgatg acgagcgcga
      901 tgatgaacgg caggtcgccg ggcgttgcgg cgcggtaggt gagggacatc ggatcactgc
      961 ggcgaatggg gtccattgca actcgtcatg ccacaggcgc gacgaccgcc gctatagtgt
     1021 cggcctgcaa acgaggtgca cccgatgccg gcgctcgagc tccgtcccaa ctgcgaactg
     1081 tgcgaccgcg acctgccgcc gcagacccgc gaggcgcgca tctgctcgaa cgagtgcaca
     1141 ttctgcgccg cgtgcgccga cgacgtcctg catgatgtct gcccgaactg cggcggcgaa
     1201 ctggtgcggc ggccgatccg gccgatggag gcttatcggc cgggcgaggg gctgcggctc
     1261 aatccagcgg ggacgacgcg gcggcacacg aaatattcgc aagatgagat cgcggcgctg
     1321 gtggcgcggc tcagggacgt gccggccgat cggcgctgag gctagacccg cttgcccttg
     1381 gggctcagcg tccaggcgac gaacagggtg accgtggcga gcaccgccgg cagcagcgcg
     1441 atgagatact ggtcgccggc ggtcagcacg gcggtgccgg cccagaagat cgagctcagc
     1501 gcttcggcga tggtggagac gcgcgaggcg acctggcgcc ggcggaacat ggcgcggcgc
     1561 atcggcacgc ggaaccagag ctggatggcg gtggcggagc ccgaggacag ggcggcgaag
     1621 acagcggtgg cggccgccag ctggaacgag gcgaacatca tcagcacgat gatgggagtg
     1681 aggacgacga gcacgacggt cgcgacggcc tcgatcttgg cctgcagcac ggtccccgga
     1741 gacaccggcg cggtgaccac gaggtcgtgg gcgtcctcgc cggaaatcgc cagccagctg
     1801 aggccgcccg aaagctggcc ggtggccatg accagcaccg ggatgacgac gacataggtg
     1861 ccggcgctct ggccgtagct gatccacaga tagagcgccg gcggcacgag gtagagcacc
     1921 tgcatcagcg tctggctgag cagccaggga tcgcgggcga gcagcttcca ctccttgacg
     1981 cgcaattgct gcttctggct gcgcggctgg aagcgcacgg tgccgtgccg ctgggcgacg
     2041 cgggtgtggg agacgccggc ggcggcgatg gcgttgcggc cgaagccggt cgaggccatc
     2101 gcgatggtgg cggcgagcgc ggcgaagccg aggacgacca cgcccaaaag ggcgggcagg
     2161 tcgccgaggg cggcccgggc cggcgcccag acgaagctgt tgttcgccgg cattgcagcg
     2221 acgaactgcg gatcgctgaa cagcgcaaag cgcgacgaca tgttgccgaa atgcaggatg
     2281 gcgatggcct ggatgccgat gacgaaaccg gcgccgacga tggcggcgat gatctgggcg
     2341 atgaggcggg tccgctgcgg gccggcgagg cggaagagcg ccaccgtgac cagcacggcg
     2401 agcgcggtgg caagggccga gagggccgca agcacgagat aggccagcag ccagcgcggg
     2461 ccgtcgtgga ggacgaggac atcgatgatg gggctcgcca gcaggcacgc cagcagcagc
     2521 gtggtgagcg cggtgatgcc ggtgcgcacg gcgaacaggg tgcgcgacga tgcaggggag
     2581 ctgaggatga ggtcgaggtc ggcgcgggcg tagtaggcgc gggtgaccga ttcgagcgcc
     2641 tggctcagca tcaccgtcca gaacaggaag cccgagccgg tgacgagcac cagcgtcggc
     2701 ttgtcggcga tgacgccgtg ggcgatccag gggccgacga tggcgttggc catcaggtgc
     2761 agcagcactg ccgcgatggc gaggacgacg atcagcgcgg tgcggcgggt cggccggccg
     2821 gcggtcatca tggcgacgcc gtcgcgccac atcagccgcc attcattgat ggcgaaccag
     2881 ggcatggtcg caggtgcaaa actcatgcgg cggcgcccag cgcggggtcg gcgtccattt
     2941 ccttctgcgc cacgaggtcg aggaagatct cctcgagcgt ggtttcgcgg ccgacccggg
     3001 tgcgcagttc ggccagggtg ccttcggcga tcagccggcc gtggttgatg acgccgatgc
     3061 gttcggccat gcgctcggcg acctcgagga tgtgggtggt catgatcacg gtcacgccct
     3121 ggcggacctt gtcgagcaac acctgcttga cctggcgggc ggacccggcg tcgaggccgg
     3181 tcaacggctc gtcgaggatg atcagtttgg ggtcatgcac gagggcgccg gcgagggcga
     3241 ccttctgcag catgcctttg gaaaagccgc cgcagcgctc gtgggcgtgc ggggcgaggc
     3301 cgagccagcc gatgagctcg gtggcgcgag cctgcgcctg gcgcgcctcg acctgccaga
     3361 ggccggcgac gaactccaga tattcgtacg gggtgaggcg gtcgtagacc atcggctcgt
     3421 cgctgaccca ggcgacgatc gacttggcgc gcagcgggtc cttgcgggtg tcgatgccga
     3481 acaccgagat cgacccggct tcgggctgca gcaggcccgc gaccatgcgc aggatggtgg
     3541 tcttgccggc gccgttgggg ccgagcaagg catagaactc gccgcccttg accgccagcc
     3601 ggaggtcttt caccaccggg cggtcgaaac tcttgctgag gccctcgatg tcgagggcca
     3661 agacggggtc ggccatggcg cgcacctgtt ggttgggcgc gcggcgcgcc cgaaggtgtc
     3721 gccacactag cggcgggcgg ttgaagccgg gtgaaagcgt tcggttaaga ttttgtgcgc
     3781 atcgcggcga gctcgcggtg cgcgcctatt gcaggccgac cgcgtcgacg atgccgccgg
     3841 tgcagccgcc gctggtgggc gctgcggcca ggatcagcgc gccgatgccc tcgggcttgt
     3901 cgatcttgcc ggtgatgccg atggtcagct cgccgatgat ccgccggctg ccgtcggtct
     3961 cgcacgcaat gcggacgcgt tcgccggctc cggcgccgaa ggctttgtcg aaggcggccc
     4021 ggatgtcgtc ctgggagagc tgctggccga catgcgaggc aaacaggtca cgcaccggcg
     4081 aagcgttgag ggcggacatg gcggtcagcg cgtcggtgaa gaaatgctgc tggtcggctc
     4141 cgtagcaggt gccgtgggtg agccattcgt gccgctcgag cgccgactgg gtgccgggca
     4201 ttaccttgtc gagttcggca cgggtgtcgg cgttgagcgt caccgccggc agcgacgacc
     4261 agtggccggc cttgtccgag gcttcgtcgg cggcatcgac actgcagtag gaattgctgc
     4321 gcggctgcgg ccagaggccg tgcagcgcaa aatggtcggc ttcgaacgag gtcgccgtct
     4381 cggccttgca ttcgggcttg cccgattgcc cctcgcagaa ggcgggctcc cagctggcgg
     4441 cgaggacgaa ctgggtcttg ccggcggccg gcgcggtggg cgctgcggcc tggacatcgg
     4501 cggtgccgca ggtcacggcg acccagcgga agtccggcgt cgcgcctgga acgacgatcc
     4561 agtagtaggt cgggctggcg gtgttgccgc cgatgacctt gtagctggtg ccgatggcca
     4621 gggtgacgtt gccggggttg gtcgccttct tgatcgactg gaccgccggg caggcctggg
     4681 tggccgtgag cgtccccgtc agcttgctct gggcggcggt aggcgccacc gccagagcca
     4741 gtatcgcgca aatcaaaatc gccagtttca caattgcctc cccaaaagac gaggcaattg
     4801 ttctattttt gttctcgtcc gtcaagagcc ggcgattcgc cgaaatggcg ggctcagcga
     4861 gcgaacttgt agccgtcggg aacgccggtc ggggacagca cgaactgcca gacctgcagg
     4921 gcccgggcgc ggaagccgcc ggcgcagcag agcaggtagt acttccagag gcggaagaag
     4981 cgctcctcct cgggggtgcg gtccttcttc cacttggcgt tgaagttgtc gtaccaggcg
     5041 accagcgtcc ggtcgtaatg cgggccgata ttgtggacgt cgacgacgct ccacagcccg
     5101 tcgatggcct tgccgatctg cgccatcgag gggatgacgc cgccggggaa gatgtatttt
     5161 tccagccagg gctcgatggt gtcggtcgac cactggctgc cgatcgagtg catcatgaac
     5221 aggccgtcgt ccttgacgac ctgccgggcc ttctcgaagt aggtccggta gttcttgtgg
     5281 ccgacatgct cgaacatgcc catggagacg accttgtcgg tcttgccctc gaactcgcgg
     5341 tagtcctgca cgcggaactc gatcggcagg tccttgtagc gctcgcggcc ataggccgcc
     5401 tggtcgggcg agacggtgac gccgacgcag cgggcgccgt atttttcggc ggcgaagccc
     5461 atgaaggcac cccagccgca gccgatgtcc cacaccagtt cgccgggctt cagctgaatc
     5521 ttgcggcaga cgaggtcgag cttggcctcc tgcgcctcat cgacattggt gacgccctcc
     5581 ggccaatagc cgcaggagcc ggtcatgcgc ttgtcgagcg acgccttgta ggcgtccgtc
     5641 tcgttgtagt gcatcgccgc gacgcgccgg ctgcgggcga cggtctgcat gttgagcagc
     5701 ttggcctggg cgatctgcca gagcaggttg ggcgtgacct tgagcttgtc ggcgacgccg
     5761 cccgtcagaa tcttgttgaa catttccgcc aggtcggcgg catcccacca gccgtccatg
     5821 taggcttcgc cgaagccgag cgagccctcg gcaaagagcc ggttccacat gcgttcgtcg
     5881 tggatctgaa gatcccaggc gtcggggccg ttgacggtca ccccagcgtc cttgagcagc
     5941 ccaacgatcc ggtctttttc ggtcacgatt cttgcgcccc cgcgcatcca taaatgtcgc
     6001 gggtaccaaa actctggagg ccgacaagtc aaggggcgag tgggcgcagc cgcccaaagg
     6061 cggccggccg gacggaggcg ttacccttgg cgagttcggc tcagtcggtt tcgaacatcg
     6121 tcagttcgac ctggaacttg ccgtcgttga acatgtcggc catgccggcc atctgcgcct
     6181 gctcggaatc gccgatgaag aacccccacc cgatctggta ggagaggtcc ttgtactcgt
     6241 cgtaattgcg cgaggtcacg tgcgggcatg cccaggtcgc gtcggcgagc ttgccgagat
     6301 cgacgagcat gacgtcgcgg ctgtcgcttt ccttcaggca gttgaagatc agcttgtcct
     6361 tgtaggtgct gaccgtgcac gagtcgaagc cggttacagt gagggtggat ttccacgcac
     6421 catcgccgga cttggcaccg cgcagggagc tgaagtcaga atcggtggcg atgagggagt
     6481 cgagatcgcc gcagatgtcg gcggcaaacg ttccggccga gggcagggcg aaaataactg
     6541 aaagcagaag caggcgcggt agcgtcattg aagtctcctg ttattgcgcg gctggagccg
     6601 ggcaggcttt gcttggagtc gtggaggcct tggtcagaac cgtgcagtag taagtcatgg
     6661 cgtcatccgc ggtcgtcagc agtcgccgga cgccgagacc gccgtcgggc tgggcgatgg
     6721 cgacatagtc gccgtgcggc gacagggtga ccgtcgcggc ggaatactgg tcgcccttga
     6781 cctgccagac cggcgagccg cgggcggcgt ccacgagctc gaccgtcccg tcttcccccg
     6841 atgccaggaa gaggtccggg gagacggcga gcgcggtctc ggtcttgccg ctgaacagat
     6901 ggtaggggtg ctgggccggc gggccgtcga gccggtagaa cgcgatgtcg ttgtcggtgt
     6961 gggtgaccgc ggtgcggcca tcgggcgaga tgctgaggcc caccgggtcg ccgccctgcg
     7021 tgccgagggt cgtcgccgcg cggtcctgcc ccagcagcca tgccgagccg tctttttcga
     7081 cgacgacgaa atgctggcca tcgggcgcgg cgctgcgcag cacggtggtt tcggcgtcga
     7141 gatcgaaggg gccggtcagc cgcttcgaca gcggatcgta gaacgcggcc ttgccgccgt
     7201 cgtcgaggaa ggcgatgccg tgcagcaggt cgcgggcggc ggtcttttcc ggcatcggca
     7261 tcggcgtctc gtcgagcgtg tccggcgcgg tgccgggtgc gaccgcgatg acgtcgccgc
     7321 cgttggtcag gacctcgagc gggcccgagg ccgggtattg gacgcggatg atccggccgt
     7381 ggccggaggc aagtcgcgcc acggccgagc cggtggtgga ctggatacgc accatgcggt
     7441 cccaggcggc gctcgcgagg tcgccggcgg gggaccatgc catccccgcg atccgatcct
     7501 cgtgctgata gacgggggcc gaatcgccgc acgctgggag cgtccagcgg atcatgctgt
     7561 cgtcggccag cgcagcgacg acgctggatg cagtgtcgga gaactgcacc gaggccatct
     7621 cgcggggacc gttgcagacg gccggcacga ccagatcgtt ggcggcctcg acgatcacga
     7681 tgtcgactgc ggcggcctgg tcggcaatgg gcgagcgcgg gttggcgacc tcggtgcgaa
     7741 gcgccgctgc ggcctcgatg gcctgcacga aattgccgct cgccagcaat tgctgggcgg
     7801 tcagcacctc gtcccgcagg tcactggtcc ggagccggtt cagggccagt acggcgtcct
     7861 tgcgcgcctg gtcggcagcg tcggtctggc ggtgggcctc ctgcgtctgg aggaaagcgt
     7921 agacgacggc ggcgatggcg aacaggacga ccaccgccat gccgccgatc gcccacacca
     7981 ggcgccgcga ggtggcgcgc tggcggtcga gcgcggcgtg cagttcggcg gtgcgcttct
     8041 gctcggcctc gaactcctgc cggtagaagt tgcggccgct ggggacgatg gcccccatga
     8101 tctgggcgct gacgcgttca ttggcggatt tgagctcggc cgggtcgaac ttcgcccatt
     8161 cgttctcgat gatccggatg cgctgtgcgt cgtgccagcg tttctcgatc gcgtcgggaa
     8221 tgtagcgggc gccttcaccc agcggatcga caaggatggg tgccatctgg cggttgccca
     8281 gccaccagtc gatttccttg tgcacccagt cgcggtcgcc ttcgaccagc ttggaaccgg
     8341 gcgtgcagat gacgagcatg gcgcgcgaac gcttgagata gggttcgtgg acgctcttcc
     8401 agtcctcgac gccgggggcg gcctggtcga aataaacgtc gagctgcggc ggctcggacg
     8461 cctgggccga gccgtcggtc accggcaaat gctggccacg cagcagttcg tacagccggc
     8521 gcgccgtggc catgccatcg ctctggcgat aacagatgaa aatcggccat tgctcggcca
     8581 tgctttagcc cccgcaagta ctgatgccga aacttttccg tcggggcaat agtttagcga
     8641 gcgggccgat tctggctttg gcgccgcggg cgtcgtaaaa gcgggcaaca gcggagggcg
     8701 acgatggtca agtggcaggg acgcgaggaa agctcgaaca tcgaggatcg ccgtggccag
     8761 ggtggcatcg gcggcggtgg cggactcggc ggcgggttca acccgggggg attcggtggc
     8821 ggcggcttcc gcctgccgag cggacgctcc ggcatgagca tgggcggcat cgcggtgctg
     8881 gtcgtcttcg tgctgatcgc catggccttc ggcatcaacc cgatcgacct gctcaccggc
     8941 agcgatacgt cgcaaagcag ttcggccagc acgcagacca cgctgccgcc gcagaatgcg
     9001 acggaagacg atttgcggca gttcgtcggc gtcgtcgtca aggacaccga gacgttctgg
     9061 accgggtact tccagcagca tggcgggacc tacaccgacc ccaaggtggt gctgtattcg
     9121 ggccagacgc agtcgggctg tggcaccgcc gattcgtcgg ccggaccgtt ctactgcccg
     9181 gtcgaccaga aagtgtacat cgacctcagt ttctaccagc agctgcgcga ccagttcggg
     9241 gcgcccggcg acttcgcgca ggcctacgtg atcgcgcacg aggtcgggca ccacgtgcag
     9301 gatctgctcg gcatcctgcc ggcgttcaac aaggcgcggc agacgctgac gcaggaccag
     9361 gccaatgcct attcggtgaa gatcgagctg caggccgatt gcttcgccgg catgtggggg
     9421 cagggcgagt tcaagcaggg ctatctcgac gacggcgacg tgcaggaagc gatcaatgcc
     9481 gccaaccaga tcggcgacga cacgctgagc cagaacacca tttcgccgcg gcagtacacg
     9541 cacggcagtt cggcacagcg catgcagtgg ttcaagaccg gctaccaggc caccgacgtg
     9601 caccagtgcg acacgggact gccggcatac tgatcacaag attgtcactc gcgcggctgg
     9661 attagagcga gatttcacga tcggccgggg gatttccgcg gatcgcgggg aggttccgtc
     9721 agctcgcggg ttttgacgcg aagtgttcac gaaatggcca caaaccggcc gcgcaaccat
     9781 tggcccttca gcctgttggt ccggcgacgc agcgaacctg cgcacctcga gcgccgcggc
     9841 gctcggcaac ccaaagatga agggaacacc aaatgaagaa gatcgcactt ctggccgtca
     9901 tgggcctcgt ggccggcggc cttgccgctc cggtcctcgc tgccaccaat gaggattcgt
     9961 tccagcgcgc cgacgccaac aaggacggcg tggtgtcgtg ggacgaagcg atcggcgtct
    10021 atccgacgtt gacccagacg ctcttccagc aggccgacgc caacggcaac aagaccctcg
    10081 acgaaggcga attcagcgtc ctgcagggcc tgagcgccgg gctgagcgac acctcgaagc
    10141 agtcgaacgg ctgaccgcgc tcccaggcgc gcctgaaagc cacccctccg ggggtggctt
    10201 tcctatgact ggagcgccgt tctctccggc ttcagcgcga ggcccttctg ggaccgcacc
    10261 tggttcagga agcgggtgaa gaggtagtgg ctgtcgtgcg gccccgggga ggcctcgggg
    10321 tggtactgca ccgaaaagat cggcttgcca tcgacgctga ggccggcgtt ggagccatcg
    10381 aacagcgaga cgtgggtttg cgtgatgccg gccggcaggc tctggctgac gaccgcgaag
    10441 ccgtggttca tcgaggtgat ctcgaccttg ccggtggtca ggtctttcac gggatgattg
    10501 gcgccgtgat ggccctggtg catcttgccg gtctgcccgc cgaccgcgag gccgagcaat
    10561 tgatggccga ggcagatgcc gaagatcggc ttgccggtat ccatcagcgc cttgatcgtc
    10621 ggcacggcat atttgccggt cgccgccgga tcgccggggc cgttgctgag gaagatgccg
    10681 tccggg
//
LOCUS       DATAZA010000141        20598 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3844448, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000141 DATAZA010000000
VERSION     DATAZA010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 20598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20598
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3844448"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..518
                     /locus_tag="VHZ56_03550"
     CDS             <1..518
                     /locus_tag="VHZ56_03550"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX4297072.1"
                     /translation="GLPVGIHAFGNSGWPVSSAGWPSFYMDEMVGHAQTSQSGLVSLV
                     IEGVFERWPDLRLVLIESGFTWAPALLWRLDRDFDILRSEVPHLKLKPSEYIRRNVWW
                     TSQPMDEPESKRVLGDIFDWLGWDRIMFSSDYPHWDFDDPTRVIMFPATDEQRRGFFI
                     DNARGVYGTRP"
     gene            515..928
                     /locus_tag="VHZ56_03555"
     CDS             515..928
                     /locus_tag="VHZ56_03555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske (2Fe-2S) protein"
                     /protein_id="HEX4297073.1"
                     /translation="MTRQVVAATSEIPPGARRRIEIDGRGIVVFNLDGEYFALLDRCP
                     HNGGSLAAGIVTGLLQSAAPGDYSYTRRGEIIRCPWHGWEFDIRTGRSFCTGIRARAR
                     PYPVTVEPGAAIAEGPYRAETVPVRVEDNYVVVDA"
     gene            991..2385
                     /locus_tag="VHZ56_03560"
     CDS             991..2385
                     /locus_tag="VHZ56_03560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015918009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX4297074.1"
                     /translation="MPASPTALDAALAHADANMANSLGRLRELIRIKSISTDPAYKAE
                     CQRAADWLVNDLASEGFAASARATPGHPVVVAHAPRVAGPKVVFYAHYDVQPVDPLAL
                     WNTDPFELTEQPQPDGGVHLVARGSSDDKGQLITFLEACRAWRATAGSLPLNVTLCLE
                     GEEESGGKNLPPFLAANRDELAADIALVCDTDLQDPQTPAITTMLRGLVGEEIVITAA
                     NKDLHSGMYGNVARNPNQVLAEIIASLRNPDGSVAVAGFYDDVREVDATTMASWQTLG
                     FDGAAYLRDIGLSIPAGEQSRSVLEQIWSRPTCEINGMSGGYTGDGFKTVIPAKASAK
                     ISFRLVADMDPDKVRAAFRAHVRARLPADCSVSFTEHGGGRAIAVPTGGRYLQQARAA
                     LADEWGRQAALRASGGSIPVAGDFKRILGLDTLLIGFANADDRIHSPNEKYDLLSFEK
                     GIRSWIRILAALAA"
     gene            complement(2389..2790)
                     /locus_tag="VHZ56_03565"
     CDS             complement(2389..2790)
                     /locus_tag="VHZ56_03565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297075.1"
                     /translation="MLASQIIKVPINRPYAEVYEFLSDPVNFPRWAANPGSDIVPMGG
                     NDYLVELPAGQRVIRFAPRNPFGVLDYQTFDDGRPSGPPVPVRLYANGEGCELVLFWL
                     QREGISEERFRSDAEWVGSDLQRLKTLLEGG"
     gene            complement(2928..3053)
                     /gene="ykgO"
                     /locus_tag="VHZ56_03570"
     CDS             complement(2928..3053)
                     /gene="ykgO"
                     /locus_tag="VHZ56_03570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012709334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HEX4297076.1"
                     /translation="MKVRNSLKALMGRHRANKLVRRRGRVYIINKVDKRYKARQG"
     gene            3232..3729
                     /locus_tag="VHZ56_03575"
     CDS             3232..3729
                     /locus_tag="VHZ56_03575"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4297077.1"
                     /translation="MAASIPEFRALVADGSTHMAGLVTLMLRSLGIRAVDEASSLAKA
                     DEMLARRPYGLVLLDDQLAGTAGLAMVRSLRQSPDHPNRLSAIIMMAAAPDAALIAAA
                     RDAGVTEFLRKPFSAHHIELRLEAIRNAPRDFVEAPAYAGPDRRRRTVGGRPRRRAAD
                     GNPAA"
     gene            complement(3726..4754)
                     /locus_tag="VHZ56_03580"
     CDS             complement(3726..4754)
                     /locus_tag="VHZ56_03580"
                     /EC_number="7.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HEX4297078.1"
                     /translation="MSTEAGELLRVENLSKTFTVGGGMFQPKLKLKALQDISFSLRRG
                     ETLGIVGESGCGKSTLGRCILQLLRPDEGRVLWLGQNLVDLDAESMRKKRRELQIIFQ
                     DPLASLNPRMTVGEIVADPLKTLMPELNAAQRRQRVSEMMEAVGLQPEMVNRYPHEFS
                     GGQAQRIGIARALITEPKLIVCDEPVSALDVSIQAQILNLLSELKDQFGLTLIFISHN
                     LSVVRHVSDRIMVLYLGRIVELAAGDVLYDDPKHPYTTALLTAVPIADPKRARLRNID
                     ALSGEIPSPINPPSGCTFRTRCRYAIGLCAEARPLLEPAGEGRLVACHRWREIDAMPG
                     MEAAAERA"
     gene            complement(4751..5737)
                     /locus_tag="VHZ56_03585"
     CDS             complement(4751..5737)
                     /locus_tag="VHZ56_03585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX4297079.1"
                     /translation="MALLDVSDLSIGFHMPGRDVQVVNKVSFSIAEGETMAIVGESGS
                     GKTQTAFSLIGLLARNGYASGSVRFEGRELLGLREADLNRVRAEKIAMIFQDPMTSLN
                     PYIRVGEQLVEVLTLHKGMHRAQAQSESIRMLDAVKLADARNIFNRYPHECSGGMRQR
                     IMIAMALLCRPKLLIADEPTTALDVTVQAQMLELFKSLTAEFGTALIIITHDLGVVAG
                     LADRMLVMYAGRAVETGTVDELFYDPRHPYTLGLLNSTPNVEAKMERLNTINGTPPNL
                     ERLPRGCAFHPRCAYRFERCFVEVPQLVGFGEGDRRKACHYPKPLVVEENVA"
     gene            complement(5737..6666)
                     /locus_tag="VHZ56_03590"
     CDS             complement(5737..6666)
                     /locus_tag="VHZ56_03590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009468947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX4297080.1"
                     /translation="MLAETRLETTAEPEVGPAALIRGRSLWRDAAYRFVRNRAAVASV
                     VVLLLVVLFTFVGPLFAPWSIEKIDWTITGKVKLLGQPSILSGHYFGTDEVGRDLFSR
                     VIQGTQISLAVGVLGAAVAVVVGTLYGAIAGYFGGRLDSAMMRFVDIFYSIPFLFILI
                     LLLIMFGRSFVVLFMGIGLISWLGMARVVRGQTLTLKNREFIEAAIATGVKPLAVVFR
                     HIVPNLLGIVVVYATLLIPEIILLESFISFLGLGIQDPNTSLGALISDGARTMQYGEL
                     WQIGFPLAFFVVVLFSFFFAGDGLRDALDPKDR"
     gene            complement(6680..7603)
                     /gene="oppB"
                     /locus_tag="VHZ56_03595"
     CDS             complement(6680..7603)
                     /gene="oppB"
                     /locus_tag="VHZ56_03595"
                     /EC_number="7.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppB"
                     /protein_id="HEX4297081.1"
                     /translation="MVVFILKRLGIAIPTLLVLIVFSFVLMKVAPGSPFTGEKNLPPE
                     TLKNIFARYNLDKPQWQQLLEYIWNIVAHFDFGPSFKYKDRSVNDIIAQGFPVTLNYG
                     FWSFILAAVVGVSLGAVAAVKQNSWADYLSVGVTIGAQVVPNFVLAPILVLIFTLGLH
                     WLPGGGWNGGKPQYLVMPVIALATTYMANIARIMRSSMLEVLNSNFIRTARAKGLPGY
                     QVILKHALKPALLPVVSYLGPVFVGMITGSVVVDYYFSTGGIGQAFINSALNRDYSTI
                     LGVTILLGALTIAGNLVVDVLYAWIDPKIRY"
     gene            complement(7683..9314)
                     /locus_tag="VHZ56_03600"
     CDS             complement(7683..9314)
                     /locus_tag="VHZ56_03600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008548928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX4297082.1"
                     /translation="MKLQAVLGAGAIALSLLGTTALTMPAFAADVPAGTKLADDQTFN
                     YRVLDNINAVDPDIVEDVDTASVVEDLFEGLYNEDAKGNPVAGAATSYDVNSDFTQYT
                     FHLRDAKWSNGDPVKASDFVYSWERAVDPKTASNYSYFLGLAGVKNADDIVAGKQPIT
                     NLGVKAIDDKTLEVDLSKPVPYFVRMTAHATLFPVPQAVVEKFGADWTKPENIVGNGA
                     YTLAENSPGERVSLKRNKNYWDDAHTVIETVNFLTINDENQGLTRYLAGEVDWTDTPA
                     GQFPTLKAQYPDQVYSDPFLCTYYFDFNVTPSGNPALQDVRVRQAISYAIDRDVIVNN
                     VLQGGQTAAYYFTPPATAGFQPPDLDYAKMSQADRDAKAKQLLADAGYGPDKPLSFTY
                     IYNTSVAHQQIATVVAQMLKEKLGINMTIQDMEFATLLDKRHSRDFEVARDAWCGDYN
                     EASTFEGLMASDSSQNNSGYANKDVDQWLKDASTSKDPNIQYKQIEEQVAKDVPIIPI
                     YFYSHPFLLKTNVKGWPFANVEQTWYAKDLFKVAQ"
     gene            complement(9575..10864)
                     /locus_tag="VHZ56_03605"
     CDS             complement(9575..10864)
                     /locus_tag="VHZ56_03605"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HEX4297083.1"
                     /translation="MMANLRKIAIVGSARIPFCRAYTGYAGESNLSMLTTALGGIADK
                     FGLRGEPVGEVMGGAVISHSRDFNVAREAALDAGFSPRTPGTNLQIACGTSLQAALNL
                     GAKIATGEIDSGIACGTDTVSDSPIVFGTKFQHRLVELNRAKTPQEKLAAFSGFTLGE
                     LTPVAPSTQEPRTGLSMGEHCELMARQWDISREAQDELALKSHQNAARAYDEGFHDDL
                     LVPCAGVLKDNNVRADTSLEKMAAMKPAFDRSSGHGTLTAANSTPLTDGAASVLLASE
                     EWAKARDLPVLAWLTFGQVAANDYAHGEGLLMAPTIAVSRMLERAGLTLQDFDLYEIH
                     EAFAAQVLCTLKAWEDPDYCKTVLGRDAPLGSIDRSRLNPKGSSLAYGHPFAATGARI
                     LGLAAKQLATEARQRALISVCTAGGQGVAAILERAVA"
     gene            complement(10861..12816)
                     /locus_tag="VHZ56_03610"
     CDS             complement(10861..12816)
                     /locus_tag="VHZ56_03610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HEX4297084.1"
                     /translation="MPATSNWRFEVDVEQIGWLTIDTPKAPVNTLSRLCLQELETIVL
                     RVEDLIASGEVCGLVIQSAKDSGFIAGADVREFETLRDPAAITELLKRAHAVFDRLEQ
                     VKAPVVAAIHGFCLGGGLELALACHYRIAVNDDKTRVGFPEVNLGIFPGFGGTGRSIR
                     QAGPVEAMQVMLTGRMVKASAARRMGLVDKLVRHRDTLHWEARKAVQQKRHSSPAPLL
                     SRAMAWGPVRPQIVSRMRAEAGKKAPRAHYPAPHALIDLFETHGDNWRAMVDGEVAGF
                     VPLMLSDTARNLRRVFFLSESLKKQGLRGNEKPVFRRVHVIGAGVMGGDIAAWCALRG
                     LAVTLQDLDMARITPALERAKVLFKKRLKDRVAVSSALARLEADPAGKGIARADVIIE
                     AVVENLEIKKKLFAELEDKAKFDALLATNTSSIELERIAEGLRDPSRLIGLHFFNPVA
                     QLPLVEIIRSGFNVERDVALGASFALAIGKSPVPVKSAPGFLVNRVLMPYMLGAVERV
                     EKGESKERIDAAAVAFGMPMGPIELLDTVGLDVGQSVARELGQAVPENSRFAALVSQK
                     KLGRKTGEGFYKWVDGKAQKGEVPATADLAALGRELVQPLVDSTGIVVRDGVVASDDL
                     ADIGVILGTGFAPFLGGPLQARKEGKA"
     gene            complement(12844..15354)
                     /locus_tag="VHZ56_03615"
     CDS             complement(12844..15354)
                     /locus_tag="VHZ56_03615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HEX4297085.1"
                     /translation="MLTLAVILIGIAGAFTLAMRRAPLWQWAVGLAVLALLSRFSWDS
                     RGFGISPDFGYWLAAFLPAIVVGLLSLKAIRLVVLTAPAYGLVKSILPRVSRTEQEAL
                     DAGTVGWDAELFSGRPSWDKLLGIRPVTLTPAERAFLDGPVNTVCAMIDDWDVRHNRA
                     DLPPEVWAYLKEQGFLGMLIGEEWGGLGFSAQAQSQIVGKIASRSVAAGITVMVPNSL
                     GPGELLEKYGTPEQKEKYLRRLARGQEVPCFALTGPYAGSDAASMRDVGVVTYDMYQG
                     KKTLGVKVSWDKRYITLAPVATLLGLAFHLHDPDHLVGDVDNIGITLALIPADFPGVE
                     IGRRHYPARSAFMNGPIKGRNVFIPMEFLIGGLDYAGQGWRMLMECLSTGRAISLPAI
                     GTVSIKQSLRVTSAYARIRRQFAIPVGIMEGVAEPLSRMVRSAYMFEAARGLTASMVD
                     EGQKPAVISALLKYRTTEAMRDRLNDALDIHGGRGVQDGPSNYLFSGYMQTPVAITVE
                     GANILTRSLITFAQGALRAHPYLYAEIAAVQDADRRSGLAAFDTAFTGHLGFMLRNMA
                     GSFLHALSGGRFASTPVRHEMAQWYRQLARYAQSFALVGDWTVAFLGGDLKRKQRLAG
                     RMADILSDLYLLSAVLKRYEDEGRLREDGPLVDAIARDLLFAIEQSFAAVFANFPNAG
                     LAWLMRALVFPLGRHRKPASDRETYRLARAVLRPGAFRDRLTVGTYVSTDPRDVTGVL
                     EDALVKVTRAEDIEAKFVRAVKKGVVERRLDRDAITDAVDAGVLTEAEAAILRLADQA
                     TDRVIRVDDFDPDELAAKQLSRRETTAAGAPQPGRAAE"
     gene            15560..17281
                     /locus_tag="VHZ56_03620"
     CDS             15560..17281
                     /locus_tag="VHZ56_03620"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEX4297086.1"
                     /translation="MALDTIADHPRPWVDHYPEGISWNVTPKTEPVHDQVLAACAKTP
                     DAVALDFMGAPTSFGKLAHDIRAFAGALQSQYGVVKGSRVALLLPNTPFYVVAYYAVL
                     LAGGTVVNCNPLYTVHELTHITRNAGADLVVTLDLKQIFDKAEALVQAGIVKKIIACH
                     FPQVLPPLKRVLYTLAKRGDLARVSASSAAGVTGWYHKLVARNDTPKPVAIDPMKDVA
                     VQQYTGGTTGLPKGAMLSHANIAANMSQIDSWGCGIFYPPSRVVAILPFFHIFAMTVC
                     MNVPLCNGTMVAMLPRFEMKGFLDLLRRIRPNILPAVPTLIQAMSKLKPDDAKALDCL
                     DLVVSGGAALPNEARASFAKVSKAILAEGYGLTEASPVVCCAALRVASKPMSIGLPVP
                     GTDVRFIDIETMRPAAIGGRGELQVKGLQVMLGYYDNPAATKDAFMDGWLRTGDVGYV
                     DTEGYVFLVDRIKDLIISSGFNVYPRLIEEALVAHPAVDETTVIGVPDDYRGEAAVAF
                     VKLKAGQSATDVELKKFIAERLNKLEMPREIIFKDQLPKTLIGKLSKKELREEYKAMK
                     GKKSEPA"
     gene            17268..17663
                     /locus_tag="VHZ56_03625"
     CDS             17268..17663
                     /locus_tag="VHZ56_03625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX4297087.1"
                     /translation="MNRPESDNRDLFAIADLAREFGISTRAIRFYEAKGLLNPERVGS
                     TRVFRRRDRARLILILRGKRLGFSLRDISDYLSLYEADRTQHAQVLLLVDKVDHRMQM
                     LEQQLGDLQTTMGELREIKKLAGERLAQA"
     gene            complement(17671..19881)
                     /locus_tag="VHZ56_03630"
     CDS             complement(17671..19881)
                     /locus_tag="VHZ56_03630"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX4297088.1"
                     /translation="MDRYEASETAAAERQLSLMSVAANETKSAIYVTDEQANIVYVNS
                     VFTRMLGYELADVVGRRAREVLGSTHYVEKDYTRLWNDLRRGRSVEQEVRTYDRHGRE
                     VWLSLTLRPVFGPDGAFRHLVGILEDTTEARQIQSLQRDVLEAMAQETPLGEVMTLVC
                     ERVESIFPEVMCSILAVDSEQKLRPLAAPSLPQHYNDAIDGLPIGPSVGSCGTAAWRG
                     EAVSVEDIETDPLWADFKALAVPLGLQACWSSPIKLRDGRVAGTFAFYFRERRGPGAW
                     HEQVVKACVQLCMLAIERDEARARIDRLAFYDELTGLPNRTRLREEMVRYFDEAEAPE
                     AALIFLDIDHFKDVNDTLGHSVGDSFLRALAGRIRKAVWDVDIVSRHGGDEFVIVLAG
                     ATALRAQRVAEKLLRVIGEAVVVEGVSLPASASIGISMCPRDGHDCATLLRNADTAMY
                     QAKSQGRNTYRFFSPEMNRMAQDRLLLGALLRDAIANRQITFSYQPQIDARTGALAGV
                     EALARWRHPALGVVPPSRFIPIAEDCGLVEAIGEFAIAEACGQLKAWDASGVDVPRVA
                     VNISPIQFRNPRLPEVVAATLAATGIAPSRLVIEITEGVMMDAFPSGIANAAALRNMG
                     VSISVDDFGTGYSSLSHLARLPVSELKIDRSFMADLEDSETVRALVTAVIRIGESLGL
                     TVVAEGVETLSQRRFLEALGCDLLQGYFFAEAMTPEMLEQWIAARGRQAVRGAA"
     gene            complement(20026..20289)
                     /locus_tag="VHZ56_03635"
     CDS             complement(20026..20289)
                     /locus_tag="VHZ56_03635"
                     /inference="COORDINATES: protein motif:HMM:NF014232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrB/UvrC motif-containing protein"
                     /protein_id="HEX4297089.1"
                     /translation="MSSQSIHKKLETLTRQMAEAAAAEDFERAAALRNEIEALTGPVV
                     RKPPPGQMGLGTNIPVAAPPSGWRRPKKPSPMTTNVKRGGPRR"
     gene            complement(20289..>20598)
                     /locus_tag="VHZ56_03640"
     CDS             complement(20289..>20598)
                     /locus_tag="VHZ56_03640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008872284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HEX4297090.1"
                     /translation="YTFGVWKGNEIVPIGKAYFGFTDEELKQLDKWVRNNTLQAFGPV
                     REVRKELVFEVAFDSAQLSSRHKSGVALRFPRINRIRWDKPAAEAATLDDMRIFVEAS
                     "
BASE COUNT         3383 a         7093 c         6802 g         3320 t
ORIGIN      
        1 ccggcctgcc ggtcggcatc cacgccttcg gcaattccgg ctggccggtc agcagcgccg
       61 gctggcccag cttctacatg gacgaaatgg tcggccacgc gcagacgagc caatcgggcc
      121 tcgtgagcct cgtcatcgaa ggcgtgttcg agcgctggcc cgatctcagg ctcgtgctca
      181 tcgaatccgg cttcacctgg gcgccggccc tgctgtggcg gctcgaccgc gatttcgaca
      241 tcctccgctc ggaggtgccg cacctgaagc tcaagccgag cgaatacatc cgccgcaacg
      301 tctggtggac cagccagccg atggacgagc ccgagagcaa gcgcgtgctc ggcgacatct
      361 tcgactggct cggctgggac cgcatcatgt tctcgtccga ctatccgcac tgggatttcg
      421 acgacccgac gcgcgtcatc atgtttccgg cgaccgacga gcagcgccgg ggctttttca
      481 tcgacaacgc ccgcggcgtc tacggtacgc gcccatgacg cggcaggtgg tcgccgcgac
      541 gtcggaaatc cctcccggcg cccgccggcg gatcgaaatc gacggccgcg gcatcgtcgt
      601 cttcaacctc gatggcgaat atttcgccct gctcgaccgc tgcccgcaca atggcggcag
      661 cctcgccgcc ggcatcgtca ccggattgct gcaatcggcc gcgccgggcg attatagcta
      721 cacccggcgg ggcgagatca tccgctgccc ctggcacggc tgggaattcg acatcaggac
      781 cggccgctcc ttctgtaccg gcatccgggc ccgcgcccgc ccctacccgg tgacggtcga
      841 gcccggagcc gccattgccg aaggtccgta tcgcgccgag accgtgcccg tgcgcgtcga
      901 ggacaactac gtggtggtcg acgcctgagg ctgccgcttg ccttccaggg cgcgtcggca
      961 taacccggcg ccagcacaag gatcgcccgc atgcccgctt cgccgaccgc cctcgatgcc
     1021 gccctcgccc acgccgatgc caacatggcc aacagcctcg gccggctgcg cgagctgatc
     1081 cgcatcaagt cgatctccac cgaccccgcc tacaaggccg aatgccagcg cgccgccgac
     1141 tggctggtga acgacctcgc ctccgaaggc ttcgcggcgt cggcacgagc caccccgggc
     1201 cacccggtcg tcgtcgcgca cgccccgcgc gtcgccggcc ccaaggtggt gttctacgcc
     1261 cactacgatg tgcagccggt cgacccgctg gccctgtgga acacggatcc attcgagctg
     1321 accgaacagc cgcagcccga cggcggcgtg cacctggtcg cccgcggcag ctccgacgac
     1381 aagggccagc tgatcacctt cctggaggcc tgccgggcct ggcgtgctac cgccggcagc
     1441 ctgccgctca acgtcacgct ctgcctcgag ggcgaggagg aatcgggtgg caagaacctg
     1501 ccgccgttcc tcgccgccaa ccgcgacgag ctggccgccg atatcgcgct ggtctgcgac
     1561 accgacctgc aggacccgca gaccccggcg atcaccacca tgctgcgcgg cctcgtcggc
     1621 gaggagatcg tgatcaccgc cgccaacaag gacctgcatt cgggcatgta cggcaacgtc
     1681 gcgcgcaacc ccaaccaggt gctcgccgaa atcatcgcca gcctgcgcaa tccggacggc
     1741 tcggtggccg tcgcgggctt ttacgacgac gtgcgtgagg tcgacgccac caccatggcg
     1801 agttggcaga cgctgggctt cgatggcgcc gcctatctcc gcgacatcgg gctgtcgatc
     1861 ccggcgggcg agcagagccg ctcggtgctt gaacagatct ggtcgcgccc gacctgcgag
     1921 atcaacggca tgagcggcgg ctacactggc gacggcttca agacggtgat cccggccaag
     1981 gccagcgcca agatttcgtt ccggctcgtc gccgacatgg accccgacaa ggtgcgcgcc
     2041 gcgttccggg cgcatgtgcg ggcgcggctg ccggccgatt gcagcgtcag cttcaccgag
     2101 cacggtggcg gcagggcgat cgccgtgccc accggcggcc gctatttgca gcaggcccgg
     2161 gcggcgctgg ccgacgaatg gggccggcag gcggcgctgc gcgcctccgg cggctcgatc
     2221 ccggtggccg gcgatttcaa gcggatcctc gggctcgaca cgctgctgat cggcttcgcc
     2281 aacgccgacg accgcatcca ctcgcccaac gagaaatacg acctgctgag ctttgagaag
     2341 ggcatccgct cgtggatccg catcctggcg gcgctggcgg cgtaggactc agccgccttc
     2401 gagcagcgtc ttcagccgct gcaggtccga gccgacccat tcggcgtcgg agcggaagcg
     2461 ctcctcgctg atgccctcgc gctgcagcca gaacagcacc agctcgcagc cctcgccatt
     2521 ggcatagagg cgcaccggca ccggcgggcc ggacggacgg ccgtcgtcga aggtctggta
     2581 gtccagcacc ccgaacggat tgcgcggcgc aaagcggatc acccgctgcc cggccggcag
     2641 ttccaccaga tagtcgttgc cgcccatcgg cacgatgtcg gagccgggat tggccgccca
     2701 gcgcggaaaa ttcaccgggt ccgagagaaa ctcgtacacc tcggcatagg gccggttgat
     2761 cggcaccttg atgatctgcg acgcaagcat tcgtccccgc cccgaggctt gccggaaacc
     2821 ccgatggtag gagcaatcgc ggcgattgcc aaggcgctgc aagggcttgc gcaaacaaaa
     2881 ggcccgccgg agcgggcctt tgcaaactgc ggcgacggcg ccggtcgtca gccctggcgg
     2941 gccttgtagc gcttgtcgac cttgttgatg atgtagacgc ggccgcgccg gcgcaccagc
     3001 ttgttggcgc gatggcggcc catcaaggcc ttgagagaat tgcggacttt catcgccagc
     3061 gaccttccga caaaacaaaa agaggcgctg cgcgccctct ggagtgcggc tgagatagag
     3121 gcaaaaccgg cctctgtcaa cgcttccgcc gcgccgaaac cggcaccgca catatggcct
     3181 tcccggacgc aaatttaccg ccccgcaagc gcagcgggcc tagattgctg catggccgct
     3241 tcgatccccg aattccgtgc ccttgtcgcc gatggctcga cccacatggc gggcctcgtg
     3301 acgctgatgc tgcgcagcct cggcatccgc gccgtcgacg aggccagcag cctcgccaag
     3361 gccgacgaga tgctggcgcg ccgaccctat ggcctagtgc tgctcgatga ccagctggcg
     3421 ggaacggccg ggctggcgat ggtccgcagc ctgcgccagt cgcccgacca tcccaaccgg
     3481 ctttcggcga tcatcatgat ggcggccgcc cccgacgcgg cgctgatcgc cgccgcccgc
     3541 gacgccggcg tcaccgagtt cctgcgcaag ccgttctcgg cccaccacat cgaactgcgg
     3601 ctcgaggcga tccgcaacgc cccgcgcgac ttcgtcgagg cccccgccta tgccggaccc
     3661 gaccgccggc gacgtaccgt aggcggtcga ccgcggcgcc gcgccgccga cggcaatcct
     3721 gccgcctagg cccgctccgc cgccgcttcc attcccggca tcgcatcgat ctcgcgccag
     3781 cggtggcagg cgacgagccg gccctcgccc gccggctcga gcagcggccg cgcctcggcg
     3841 caaagtccga tggcatagcg gcagcgggtg cggaaggtgc agccggatgg cggattgatc
     3901 ggcgatggga tttcaccgct gagcgcgtcg atgttgcgca gtcgcgcccg tttcggatcg
     3961 gcgatcggca ccgccgtcag cagcgccgtc gtgtaagggt gcttgggatc gtcgtagagc
     4021 acgtcgccgg cggccagctc cacgatgcgc ccgagataga gcaccatgat gcgatccgaa
     4081 acgtgccgga ccaccgacaa attgtgcgag atgaagatca gcgtcagccc gaactggtcc
     4141 ttcagctcgc tgaggaggtt gaggatctgc gcctggatcg acacgtcgag cgccgacacc
     4201 ggctcgtcgc agacgatcag cttgggctcg gtgatcagcg cccgggcgat gccgatgcgc
     4261 tgcgcctggc cgcccgagaa ttcgtgcgga tagcggttga ccatctcggg ctgcagcccc
     4321 accgcctcca tcatctcgct gacccgctgc cgccgctgcg ccgcattgag ctcgggcatc
     4381 agcgtcttca acggatcggc gacgatctcg cccaccgtca tgcgcgggtt gagcgaggcg
     4441 agagggtcct ggaagatgat ctgcagctcg cggcgcttct tgcgcatcga ttccgcatcg
     4501 agatcgacga ggttctgccc gagccacagc acccggccct cgtcgggccg cagcagctgc
     4561 aggatgcagc ggccgagggt cgacttgccg cagccgctct cgccgacgat gcccagcgtt
     4621 tcgccgcgcc gcagcgagaa cgagatgtcc tgcagcgcct tgagcttcag cttgggctgg
     4681 aacatgccgc cgccgacggt gaaggtcttg ctgaggttct cgacccgcag cagttcgccg
     4741 gcctcggtgc tcacgcgacg ttctcctcga cgaccagcgg cttgggatag tggcaggcct
     4801 tccgccggtc cccctcgccg aagccgacca gttgcggcac ctcgacgaag cagcgctcga
     4861 accggtaggc gcagcgcgga tggaaggcgc agccgcgcgg cagccgctcg aggttgggcg
     4921 gcgtgccgtt gatggtgttg agccgctcca tcttggcctc gacgttgggc gtcgagttga
     4981 gcaggcccag agtgtagggg tgccgcggat cgtagaacag ctcgtcgacg gtgccggttt
     5041 cgacggcccg gcccgcatac atcaccagca tgcggtcggc gaggccggcg acgacgccta
     5101 gatcgtgcgt gatgatgatc agcgccgtgc cgaactcggc cgtcagcgac ttgaacagct
     5161 ccagcatctg cgcctgcacc gtgacgtcga gcgccgtcgt cggctcgtcg gcgatcaaca
     5221 gcttcggccg gcacagcagc gccatcgcga tcatgatgcg ctgccgcatg ccgccggaac
     5281 attcgtgcgg gtagcgattg aagatgttgc gcgcgtccgc cagcttgacc gcgtcgagca
     5341 tgcggatcga ttccgactgc gcctgcgcac ggtgcatgcc cttgtgcagc gtcagcacct
     5401 cgaccagctg ctcgcccacc cggatgtagg gattgagcga ggtcatcggg tcctggaaga
     5461 tcatcgcgat cttttcggcc cgcacgcggt tgaggtcggc ctcgcgcagc cccagcagct
     5521 cccgcccctc gaagcgcacg ctgccggagg catagccgtt gcgcgccagc agcccgatca
     5581 gcgagaacgc ggtctgcgtc ttgcccgagc cgctttcgcc gacgatggcc atggtctcgc
     5641 cttcggcgat cgagaagctg accttgttca cgacctgcac gtcgcggccc ggcatgtgga
     5701 agccgatact gaggtcgctg acgtcgagca gggccatcag cggtccttcg gatcgagcgc
     5761 gtcgcgcagg ccgtcgccgg cgaaaaagaa gctgaacagc acgacgacga agaacgccag
     5821 cgggaagccg atctgccaga gctcgccata ctgcatggtg cgcgcgccgt ccgagatcag
     5881 cgcgccgagc gaggtgttgg gatcctggat gccgagcccg aggaacgaaa tgaagctctc
     5941 gagcaggatg atctcgggga tcagcagcgt cgcatagacc acgacgatgc cgagcaggtt
     6001 cggcacgatg tgacggaaca ccaccgccag cggcttcacc ccggtggcga tggccgcctc
     6061 gatgaattcg cggttcttca gcgtcagcgt ctggccgcgc acgacgcgcg ccatgccgag
     6121 ccacgagatc agcccgatgc ccatgaacag caccacgaac gagcggccga acatgatcag
     6181 cagcaggatc aggatgaaca ggaacgggat cgagtagaag atgtcgacga agcgcatcat
     6241 ggcactgtcg agccggccgc cgaaatagcc ggcgatggcg ccgtagaggg tgccgacgac
     6301 caccgccacg gcggccccga ggacgcccac cgccagcgag atctgcgtgc cctggatgac
     6361 ccgcgagaac aggtcgcgcc cgacttcgtc ggtgccgaaa tagtgcccgc tcaggatcga
     6421 tggctggccc agcagcttga ccttgccggt gatcgtccag tcgatctttt cgatcgacca
     6481 cggcgcgaac agcggcccga cgaaggtgaa cagcacgacc agcagcagca cgacgacgct
     6541 ggcgaccgcc gcccggttgc gcacgaaacg gtaggccgcg tcgcgccaca gcgaccggcc
     6601 gcggatcagc gccgccgggc cgacctccgg ttcggcagtg gtttcgagcc tggtttcggc
     6661 cagcatcgcg cccggcctcc tagtaacgga tcttcggatc gatccatgcg tagagcacgt
     6721 cgaccacgag gttgccggcg atggtcagcg cgccgagcag gatggtaacg cccaggatcg
     6781 tcgagtagtc gcgattgagg gcgctgttga tgaaggcctg gccgatgccg ccggtggaaa
     6841 aatagtagtc gaccaccacc gacccggtga tcatgccgac gaacaccggc ccgaggtacg
     6901 agaccaccgg cagcagcgcc ggcttcagcg cgtgcttgag gatcacctgg tagcccggca
     6961 gccccttggc gcgggcggtg cggatgaaat tggagttcag cacctcgagc atcgaggagc
     7021 gcatgatgcg ggcgatgttg gccatgtagg tggtggcgag cgcgatcacc ggcatcacca
     7081 ggtattgcgg cttgccgccg ttccagccgc cgccgggcaa ccagtgcagc ccgagcgtga
     7141 agatcagcac caggatcggc gccaggacga aattcggcac cacctgggcg ccgatggtga
     7201 cgccgaccga caggtagtcg gcccagctgt tctgcttgac cgccgccacc gcccccagcg
     7261 agacgccgac gaccgcggcc aggatgaacg accagaagcc gtaattcagg gtaaccggaa
     7321 agccctgcgc gatgatgtcg ttgaccgagc ggtccttgta cttgaacgac ggcccgaaat
     7381 cgaaatgcgc aacgatgttc cagatgtatt cgagcagctg ctgccactgc ggcttgtcga
     7441 ggttgtagcg ggcgaagatg ttcttcagcg tctccggcgg caggttcttt tcgccggtaa
     7501 acggcgaacc cggcgccacc ttcatcagga cgaagctgaa gacgatcagg accaggaggg
     7561 tcgggatcgc gatccccagg cgcttgagta tgaaaacgac cattaaagcg ctattccagg
     7621 aaattgccgg aaacggctaa agccccgcgc gaacgcgggg cttcggttgc aatcgccggc
     7681 gcctactgcg cgaccttgaa gagatccttg gcgtaccagg tctgctcgac gttggcgaac
     7741 ggccagccct tgacgttggt cttcagcagg aacgggtggc tgtagaagta gatcgggatg
     7801 atcggcacgt ccttggcgac ctgctcttcg atctgcttgt actggatgtt cggatccttg
     7861 ctggtcgaag catccttcag ccactggtcg acgtccttgt tggcgtagcc cgaattgttc
     7921 tgcgacgagt cggacgccat caggccctcg aaggtcgagg cttcgttgta gtcgccgcac
     7981 caggcgtcgc gggccacttc gaagtcgcgc gaatggcgct tgtcgagcag cgtcgcgaac
     8041 tccatgtcct ggatcgtcat gttgatgccg agcttttcct tgagcatctg cgcgacgacg
     8101 gtggcgatct gctggtgcgc caccgaggtg ttgtagatgt aggtgaagct cagcggcttg
     8161 tccggaccgt agccggcgtc ggcgagcagc tgcttggcct tggcgtcgcg gtcggcctgg
     8221 ctcatcttgg cgtagtcgag gtcgggcggc tggaagccgg cggtggccgg cggcgtgaag
     8281 tagtaggccg ccgtctggcc gccctgcagc acgttgttga cgatcacgtc gcggtcgatg
     8341 gcgtaggaga tcgcctggcg cacgcggacg tcctgcagcg ccggattgcc cgacggcgtg
     8401 acgttgaagt cgaagtaata ggtgcacagg aacgggtcgg aatagacctg gtccggatac
     8461 tgcgccttca gcgtcgggaa ctgcccggcc ggggtatcgg tccagtcgac ctcgccggcg
     8521 agatagcggg tcaggccctg gttctcgtcg ttgatggtga ggaaattgac ggtctcgatc
     8581 accgtgtggg cgtcgtccca gtagttcttg ttgcgcttga ggctgacgcg ctcgccgggc
     8641 gaattctcgg ccagcgtgta ggcgccgttg ccgacgatgt tctcgggctt ggtccagtcg
     8701 gcgccgaact tctcgaccac cgcctgcggt accgggaaca gcgtcgcatg cgcggtcatg
     8761 cgcacgaagt acggcaccgg cttgctgaga tcgacctcga gcgtcttgtc gtcgatcgcc
     8821 ttgaccccga gattggtgat cggctgcttg cccgcgacga tgtcgtcggc gttcttcacg
     8881 cccgccaggc cgaggaaata ggaatagttg gacgcggtct tgggatcgac ggcccgctcc
     8941 cagctgtaga cgaaatcgct ggccttgacc ggatcgccat tcgaccattt cgcatcgcgc
     9001 aggtggaacg tgtactgggt gaaatcggag ttgacgtcgt agctcgtcgc agcgccggct
     9061 accggattgc ccttggcatc ctcattgtag aggccctcga acagatcctc gaccacggag
     9121 gcggtatcga cgtcctcgac gatgtcggga tcgacggcat tgatgttgtc cagcacgcgg
     9181 taattgaagg tctggtcatc ggccagcttg gtgcccgccg gaacatcggc cgcaaaggcc
     9241 ggcatggtga gggcggtggt gcccagcaga gacagcgcga tcgcgcccgc ccccagaacg
     9301 gcttggagtt tcatagtgac ccatctcctg tttgacgttt cctgacggtc cgcagttctg
     9361 cgctgtggac gcttcttttg tgccggggga tttgacccct cggtcaagat taacgaaccc
     9421 tatatggcaa aagcgtccac tgacaagcaa aagcatgacg taagcgtcaa cctgcggacg
     9481 ggcctgcgca agcccatgaa aagccatgtc tttcggtggc accggcggta ctccggcacc
     9541 ctccggagct gacgatatcc tgacagtggc cggctcaggc gacggcgcgc tcgaggatcg
     9601 ccgccacgcc ctgaccgccg gcggtacaca ccgagatcag cgcccgctgg cgggcctcgg
     9661 tcgccagttg cttggccgcc agcccgagga tgcgcgcccc ggttgcggcg aacgggtggc
     9721 cataggcgag gctcgagccc ttggggttga gccggctgcg gtcgatgctg ccgagcggcg
     9781 cgtcgcggcc cagcacggtc ttgcagtagt ccggatcttc ccacgccttg agcgtacaca
     9841 gcacctgcgc cgcgaacgcc tcgtggatct cgtagaggtc gaaatcctgg agcgtcagtc
     9901 cggcccgctc gagcatgcgg ctgacggcga tggtcggcgc catcagcagc ccttcgccat
     9961 gcgcgtagtc gttcgcggcg acctgcccga aggtgagcca ggcgaggacc ggcaggtcgc
    10021 gcgccttcgc ccattcctcg ctggccagca gcaccgacgc ggcaccgtcg gtgagcggcg
    10081 tcgaattggc ggcggtgagc gtgccgtggc ccgagctgcg atcgaaggcg ggcttcatcg
    10141 ccgccatctt ctcgaggctg gtgtcggccc gcacgttatt gtccttgagc accccggcgc
    10201 agggcaccag cagatcgtcg tggaagcctt cgtcgtaggc ccgcgccgcg ttctggtggc
    10261 tcttcagcgc cagctcgtcc tgcgcctcgc gggaaatgtc ccactgccgg gccatcagct
    10321 cgcaatgctc gcccatgctg agcccggtgc gcggctcctg ggtcgagggc gccaccggcg
    10381 tcagctcgcc cagcgtgaag ccggagaacg cagcgagctt ttcctgcggc gtcttcgccc
    10441 ggttgagctc gaccagccga tgctggaatt tcgttccaaa gacgatcggg ctgtcggaca
    10501 ccgtgtcggt gccgcaggcg atgccgctgt cgatctcgcc ggtggcgatc ttggcaccga
    10561 ggttgagcgc cgcctgcagg ctggtgccgc aggcgatctg cagattggtc cccggagtgc
    10621 gcggcgaaaa gccggcgtca agcgccgcct cgcgcgccac gttgaagtcg cggctgtgcg
    10681 agatcaccgc gccacccatc acctcgccca ccggctcgcc ccgcagaccg aacttgtcgg
    10741 cgatgccgcc gagcgccgtg gtcagcatcg acaggttcga ttccccggca tagccggtat
    10801 aggcgcggca gaacgggatg cgcgccgagc cgacgatggc gatcttccgc aaattcgcca
    10861 tcaggctttt ccttccttgc gggcctgcag cggaccgccg aggaatggcg caaagccggt
    10921 cccgaggatc acgccgatat cggcaagatc gtcactggcg acgacgccgt ccctgaccac
    10981 gatcccggtg ctgtcgacca gcggctgcac cagctcgcga ccgagcgccg cgaggtcggc
    11041 cgtcgccggc acctcgccct tctgcgcctt gccgtcgacc catttgtaaa agccctcgcc
    11101 ggtcttgcgg ccgagcttct tctggctgac cagcgcagcg aaacgcgagt tctccggcac
    11161 cgcctggccg agctcgcgcg ccaccgactg gccgacgtcg agcccgacgg tgtcgagcaa
    11221 ttcgatcggt cccatcggca tgccgaaggc caccgccgcg gcatcgatgc gttccttgct
    11281 ctcgcccttc tcgacccgct cgacggcgcc cagcatgtag ggcatcagca cccggttgac
    11341 gagaaacccc ggcgcggact tgaccggaac ggggctcttg ccgatggcga gcgcaaaact
    11401 cgcacccaag gccacgtcgc gttcgacgtt gaagccggag cggatgattt cgaccagcgg
    11461 cagctgcgcc accgggttga agaagtgcag cccgatcagc cgcgacgggt cgcgcagccc
    11521 ctcggcgatc cgctcgagct cgatcgagga cgtgttggtg gcgagcagcg cgtcgaactt
    11581 cgccttgtcc tcgagctcgg cgaacagctt cttcttgatc tcgaggttct cgaccaccgc
    11641 ctcgatgatc acgtcggccc gggcgatgcc cttgccggcc gggtccgcct cgagccgcgc
    11701 cagcgccgaa ctcactgcga cgcgatcctt gagccgcttc ttgaacagca ccttcgcccg
    11761 ctccagcgcc ggggtgatgc gcgccatgtc gaggtcctgc agcgtcaccg cgaggccgcg
    11821 cagcgcgcac caggcggcaa tgtcgccgcc catgacgccg gcgccgatga catggacccg
    11881 ccggaatacc ggcttctcgt tgccgcgcag gccctgcttc ttgagcgatt ccgacaggaa
    11941 gaacacccgc cgcaggttgc gcgccgtgtc gctgagcatc agcggcacga agccggcgac
    12001 ctcgccatcc accatcgccc gccagttgtc gccatgcgtc tcgaacaggt cgatcagcgc
    12061 gtgcggcgcc ggatagtggg cgcgcggcgc cttcttgccg gcctcggccc gcatccggct
    12121 gacgatctgc ggccgcaccg gcccccacgc catggcccgg ctgagcagcg gcgccggcga
    12181 agaatgccgt ttctgctgca ccgccttgcg ggcttcccag tgcagcgtgt cgcgatgccg
    12241 gaccagcttg tcgacgaggc ccatgcggcg cgcggcgctg gccttgacca tgcggccggt
    12301 gagcatgacc tgcatggcct cgaccggtcc ggcctgccgg atcgagcggc cggtgccgcc
    12361 gaagcccggg aagatgccga gattgacctc ggggaagccg acccgggtct tgtcgtcatt
    12421 gaccgcgatc cggtagtggc aggcgagcgc cagctccagc ccgccgccga ggcagaagcc
    12481 gtggatcgcc gcgaccaccg gcgccttgac ctgctccagg cggtcgaaca cggcgtgcgc
    12541 gcgcttcagc aattcggtga tcgcggccgg atcgcgcagc gtctcgaact cgcgcacgtc
    12601 ggccccggcg atgaagccgc tgtccttggc cgactggatg acgaggccgc acacctcgcc
    12661 cgaggcgatg agatcctcga ccctgaggac gatggtctcg agttcctgca ggcagagccg
    12721 gctgagcgtg ttgaccggcg ccttcggcgt gtcgatggtc agccagccga tctgctcgac
    12781 atcgacctcg aagcgccagt tgctggtggc aggcatctgc ggttgcggca cggtgatgtc
    12841 ctcttactcg gcggcgcggc cgggctgcgg cgcgccggcc gcggtggtct cgcgccgcga
    12901 cagctgcttt gccgccagct cgtccgggtc gaaatcgtcg acccggatca cccggtcggt
    12961 ggcctggtcg gcaagccgca ggatggcggc ctcggcctcg gtcaggacgc ccgcatcgac
    13021 cgcgtcggtg atcgcgtcgc ggtcgagccg gcgctccacc acgcccttct tgaccgcccg
    13081 cacgaacttg gcctcgatgt cctcggcccg cgtcaccttg accagcgcat cctcgagcac
    13141 gccggtgacg tcccgcggat cggtgctgac ataggtgccg acggtcagcc ggtcgcggaa
    13201 ggcgccgggc ctgagcacgg cgcgggccag ccggtaggtc tcgcggtcgg acgccggctt
    13261 gcggtgccgg ccgagcggaa acaccagcgc ccgcatcagc cacgccagcc cggcattggg
    13321 aaagttcgcg aacaccgccg caaagctctg ctcgatggcg aacagcaggt cgcgcgcgat
    13381 cgcatcgacc agcggcccgt cctcgcgcag ccggccctcg tcctcgtagc gcttcagcac
    13441 cgccgacagc aggtagagat cggagaggat gtcggccatc cgcccggcga gccgctgctt
    13501 gcgcttgagg tcgccaccga ggaacgccac ggtccagtcg ccgaccagcg cgaagctctg
    13561 cgcatagcgg gcgagctgcc gataccactg cgccatctcg tgccgcaccg gggtcgaggc
    13621 gaagcgcccg ccgctcagcg cgtggaggaa gctgccggcc atgttgcgca gcatgaagcc
    13681 gagatgcccg gtgaacgccg tgtcgaacgc cgcaaggccg gagcgccggt cggcatcctg
    13741 taccgccgcg atctcggcgt agaggtaggg gtgcgccctg agcgcccctt gcgcgaaggt
    13801 gatcagcgag cgggtgagga tattggcgcc ctcgacggtg atcgccaccg gcgtctgcat
    13861 gtagcccgag aacaggtagt tcgacggccc gtcctgcacg ccgcggccgc catggatgtc
    13921 gagcgcgtcg ttcagccggt cgcgcatggc ctcggtggtg cggtacttga gcagcgccga
    13981 gatcaccgcc ggcttctgcc cctcgtcgac catcgacgcg gtgagcccgc gcgccgcctc
    14041 gaacatgtag gcggagcgca ccatccggct cagcggctcg gcgacgccct ccatgatccc
    14101 caccggaatc gcgaactgcc ggcggatgcg ggcgtaggcg gaggtgacgc gcagcgattg
    14161 cttgatcgac accgtgccga tggccggcag cgagatggcg cgcccggtgg aaaggcattc
    14221 catcagcatc cgccagccct gcccggcgta gtcgaggccg ccgatcagga attccatcgg
    14281 gatgaagacg ttgcggccct tgatcggccc gttcatgaac gccgagcggg ccggatagtg
    14341 gcgccggccg atctcgacgc cggggaaatc ggcagggatc agcgccagcg tgatgccgat
    14401 attgtcgacg tcaccgacca ggtggtcggg atcgtgcagg tggaaggcga ggccgagcag
    14461 cgtcgccacc ggcgccagcg tgatgtagcg cttgtcccag ctgaccttga cgcccagcgt
    14521 cttcttgccc tggtacatat cgtaggtgac gacgcccacg tcgcgcatgc tggcggcgtc
    14581 ggaaccggca taggggccgg tgagcgcaaa gcacggcacc tcctgcccgc gggcgaggcg
    14641 gcggaggtat ttctccttct gctccggggt gccgtatttt tccagcagct cgcccggccc
    14701 gagcgaattg ggcaccatca cggtgatgcc cgccgctacc gatcgcgatg cgatcttgcc
    14761 gacgatctgg ctctgcgcct gcgccgaaaa accgaggccg ccccattcct cgccgatgag
    14821 catgccgagg aagccctgct ccttgaggta ggcccagacc tccggcggca ggtcggcacg
    14881 attgtgccgc acgtcccagt cgtcgatcat ggcgcagacg gtgttgaccg gcccgtcgag
    14941 gaacgcccgt tccgccggtg tcagcgtcac cggccggatg ccgagcagct tgtcccagct
    15001 ggggcggccc gagaacagct cggcgtccca gccgacggtg ccggcgtcga gcgcttcctg
    15061 ctcggtccgc gagacgcgcg gcaggatgga tttgaccagc ccataggccg gcgccgtgag
    15121 caccacgagg cggatcgcct tcagcgacag cagaccgacg acgatcgccg gcaggaaggc
    15181 agccagccag tagccgaaat cgggggaaat gccgaaaccg cggctgtccc agctgaagcg
    15241 cgacagcagc gcgagcacgg ccagcccgac cgcccactgc cagagcgggg cccggcgcat
    15301 cgccagggtg aaggcccccg cgatgccgat cagaatcacg gccagcgtca gcaatccgtc
    15361 ctccgccgcg agtgtgccgc ggcttttaat ccacggccgg tggcgtttca aacatcatta
    15421 cgcgtcgttg acgtatacgt caaccaagct tcgcttacga gagccctggc ttgccgtggc
    15481 gtcgccggtt tgacccttac gtcaacgcgt gctctatctg gtgtcgaaaa agcgggccgc
    15541 agatgccccg gaggagatga tggcgctgga cacgatcgcg gaccatccgc ggccctgggt
    15601 cgaccactac cccgagggca tcagctggaa cgtgacgccg aaaaccgagc cggtgcacga
    15661 ccaggtgctc gccgcctgcg ccaagacgcc cgacgcggtg gcgctggatt tcatgggcgc
    15721 cccgaccagc ttcggcaagc tggcgcacga catccgcgcc ttcgccggcg ccctgcagtc
    15781 gcaatacggc gtcgtcaagg gcagccgggt ggcgctgctg ctgcccaata cgccgttcta
    15841 cgtggtggcc tattacgcgg tgctgctcgc cggcggcacc gtggtcaact gcaacccgct
    15901 ctacaccgtc cacgagctca cccacatcac caggaacgcc ggtgccgacc tcgtcgtcac
    15961 cctcgacctc aagcagatct tcgacaaggc cgaggcgctg gtgcaggcgg ggatcgtcaa
    16021 gaagatcatc gcctgccatt tcccgcaggt gctgccgccg ttgaagcgcg tgctctatac
    16081 gctggccaag cgcggcgacc tggcgcgggt ttcggcgtca tcagccgccg gcgtcaccgg
    16141 ctggtaccac aagctggttg cccgcaacga cacccccaaa cccgtcgcca tcgatccgat
    16201 gaaggacgtg gcggtgcagc aatacaccgg cggcaccacc ggcctgccga aaggcgccat
    16261 gctgagccac gccaacatcg ccgccaacat gagccagatc gattcgtggg gctgcggcat
    16321 cttctatccg cccagccgcg tcgtcgcgat cctgccgttc ttccacatct tcgcgatgac
    16381 cgtgtgcatg aacgtgccgc tctgcaacgg caccatggtc gccatgctgc cgcgcttcga
    16441 gatgaagggc ttcctcgacc tgctgcggcg catccgcccc aacatcctgc ccgccgtgcc
    16501 gacgctgatc caggcgatga gcaagctgaa gcccgacgat gccaaggcgc tcgattgcct
    16561 cgacctcgtc gtctccggcg gcgcggccct acccaacgag gcacgggctt cctttgccaa
    16621 ggtgtcgaag gccatcctcg ccgagggcta cggcctcacc gaagcctcgc cggtggtctg
    16681 ctgcgcggcg ctgcgcgtcg ccagcaagcc gatgtcgatc ggcctgccgg tccccggcac
    16741 cgatgtgcgc ttcatcgaca tcgagacgat gcggccggcc gcgatcggcg ggcgcggcga
    16801 actgcaggtc aagggcctgc aggtgatgct cggctactac gacaatccgg ccgccaccaa
    16861 ggacgccttc atggatggct ggctgcgtac cggcgatgtc ggctacgtcg acaccgaggg
    16921 ctatgtgttc ctcgtcgacc gcatcaagga cctcattatc tcgtcgggct tcaacgtcta
    16981 tccgcgcctt atcgaggaag cgctggtggc gcacccggcg gtcgacgaga ccaccgtcat
    17041 cggggtgccc gacgattatc gcggcgaggc ggcggtggcc ttcgtcaagc tcaaggccgg
    17101 acagtcggcg accgacgtgg aattgaagaa attcatcgcc gagcggctca acaaacttga
    17161 aatgccgcgc gagatcatct tcaaggacca gctacccaag acgctcatcg gcaagctcag
    17221 caagaaggag ctgcgcgagg agtacaaggc gatgaagggg aaaaagagtg aaccggcctg
    17281 agagcgacaa ccgcgacctt ttcgcgatcg ccgatcttgc gcgcgagttc ggcatctcga
    17341 cccgcgccat ccgcttctac gaggccaagg gcctgctcaa tccggagcgc gtcggctcga
    17401 cccgcgtgtt ccgccgccgc gaccgggcgc ggctgatcct gatcctgcgc ggcaagcggc
    17461 tcggcttctc gctgcgcgac atctccgact acctgagcct ctacgaggcc gaccgcacgc
    17521 agcacgcgca ggtgctgctg ctggtcgaca aggtcgacca ccgcatgcaa atgctggagc
    17581 agcagctggg cgacctgcag acgacgatgg gcgaattgcg cgagatcaag aagctcgccg
    17641 gcgaacgtct cgcccaggcc taggccggat ctaggcggcg ccgcgcaccg cttgcctgcc
    17701 gcgcgccgcg atccactgtt cgagcatctc gggcgtcatc gcctcggcga agaaatagcc
    17761 ctgcagcagg tcgcagccga gcgcctcgag gaagcgccgc tgcgacagcg tctcgacgcc
    17821 ctcggcaacg accgtcagcc ccaggctctc gccgatgcgg atcaccgcgg tgaccagcgc
    17881 ccgcaccgtc tcgctgtcct cgaggtcggc catgaagctg cggtcgatct tgagctccga
    17941 gaccggcagc cgcgccagat ggctgaggct cgaatagccg gtgccgaaat cgtccaccga
    18001 gatggagacg cccatgttgc gcagcgccgc ggcattggcg atgccgctcg ggaaggcgtc
    18061 catcatgacg ccctcggtga tctcgatgac cagccgcgac ggcgcgatgc cggtggccgc
    18121 cagcgtggcc gcgaccactt cgggcagccg cggattgcgg aactggatcg gcgagatgtt
    18181 gacggcgacc cgcggcacgt cgacgccgct cgcgtcccat gccttgagct ggccgcaggc
    18241 ctcggcgatg gcgaattcgc cgatcgcctc gaccagcccg caatcctcgg cgatcgggat
    18301 gaaacggctg ggcggcacga cgccgagcgc cggatgccgc cagcgcgcca gcgcctcgac
    18361 gccggcgagc gccccggtcc gggcatcgat ctgcggctgg tagctgaacg tgatctggcg
    18421 gttggcgatg gcgtcgcgca gcagcgcccc gagcagcagc cggtcctgcg ccatgcggtt
    18481 catctcgggc gagaagaacc ggtaggtgtt ccggccctgg ctcttggcct ggtacatggc
    18541 ggtgtcggca ttgcgcagca gcgtcgcgca atcgtggccg tcgcgcgggc acatgctgat
    18601 gccgatgctg gcggaggccg gcagcgacac gccctcgacc accaccgcct cgccgatcac
    18661 ccgcagcagc ttttcggcaa cccgctgggc ccgcagcgcc gtggcgccgg cgagcacgat
    18721 gacgaactcg tcgccgccgt gccggctgac gatgtcgacg tcccacaccg ccttgcggat
    18781 gcgcccggcg agggcccgca ggaagctgtc gccgaccgaa tggccgagcg tgtcgttgac
    18841 gtccttgaaa tgatcgatgt cgagaaagat cagcgccgcc tcgggcgcct cggcctcgtc
    18901 gaaatagcgg accatctcct cgcgcagcct ggtgcggttg ggcagcccgg tgagctcgtc
    18961 gtagaacgcc agccggtcga tgcgggccct ggcctcgtcg cgctcgatcg ccagcatgca
    19021 cagctgcacg caggccttga ccacctgctc gtgccaggcg cccgggccgc ggcgctcgcg
    19081 gaagtagaag gcgaaggttc ccgccacccg gccgtcgcgc agcttgatcg ggctcgacca
    19141 gcaggcctgc agcccgagcg gcaccgccag cgccttgaag tcggcccaca gcggatcggt
    19201 ctcgatgtcc tcgacgctga ccgcctcgcc ccgccatgcg gccgtgccgc aggagccgac
    19261 gctgggcccg atcggcaggc cgtcgatggc gtcgttgtag tgctggggca gcgacggcgc
    19321 cgccagcggc cggagcttct gctcgctgtc gaccgcgagg atcgagcaca tgacttcggg
    19381 gaagatgctc tcgacccgct cgcagaccag cgtcatcacc tcgccgagcg gcgtctcctg
    19441 cgccatcgcc tccagcacgt cgcgctgcag cgactggatc tgccgcgctt cggtggtgtc
    19501 ctcgaggatg ccgaccaggt gccggaacgc gccgtcggga ccgaacaccg ggcgcagcgt
    19561 cagcgacagc cagacctcgc ggccgtgccg atcgtaggtg cgcacctcct gctcgacgct
    19621 gcggccgcgc cgcagatcgt tccacagcct tgtgtagtcc ttctcgacat agtgggtgct
    19681 gcccagcacc tcgcgcgccc ggcggccgac gacgtcggcc agctcgtagc cgagcatgcg
    19741 cgtgaacacg ctgttgacgt agacgatgtt ggcctgctcg tcggtcacgt agatggcgga
    19801 cttggtctcg ttcgccgcga ccgacatcag gctgagctgc cgctcggccg cggccgtctc
    19861 cgatgcctcg tatcgatcca ttcgtcccat tgtccggccg gcaatgtcgg cacgaacccc
    19921 cattcgcgcc aaatctaggc gccgcgaacg taaacaattg acctacgcgg gcggacgaat
    19981 gggattcaag cgcgccggca aatgtcccga tggttgcgga actgtttagc ggcgcgggcc
    20041 gccgcgcttg acgttcgttg tcatcgggct gggctttttc ggccgccgcc agccgcttgg
    20101 cggcgccgcg accgggatgt tggtgccgag ccccatctgc cccggcggcg gcttgcgcac
    20161 caccgggccg gtgagcgcct cgatctcgtt gcgcagcgcc gccgcccgct cgaagtcttc
    20221 ggccgccgcg gcttcggcca tctgccgggt gagcgtctcg agcttcttgt ggatggattg
    20281 cgacgacatc agctggcctc gacgaagatg cgcatgtcgt cgagcgtcgc cgcctccgcc
    20341 gccggcttgt cccagcggat gcgattgatc cgcggaaagc gcagcgccac gcccgatttg
    20401 tgccggctcg atagctgcgc cgagtcgaag gccacctcga acaccagctc cttgcggacc
    20461 tcgcgcaccg gcccgaacgc ctgcagcgta ttgttgcgga cccatttgtc gagctgcttc
    20521 agctcctcgt cggtgaagcc gaaatacgcc ttgccgatcg gaacgatctc gttgcccttc
    20581 cagacgccga acgtgtag
//
LOCUS       DATAZA010000142         7556 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2800499, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000142 DATAZA010000000
VERSION     DATAZA010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 7556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7556
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2800499"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(80..811)
                     /locus_tag="VHZ56_03645"
     CDS             complement(80..811)
                     /locus_tag="VHZ56_03645"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX4297091.1"
                     /translation="MDDDAERLALVLGGLDLPRNQSAAGPRRTPGSQKRSEVTVHQLR
                     VFWAIAHSETLTKAAKQLGLAQPSLSQQLSKLETTVGAQLFHRRSGEMVLTEAGNYLM
                     PRAEQVLRGMREIEDGLAQYSDGKRVTVRIAGINSALRVILPEAISQMQNLHPAADYD
                     IQESAPADVLEMLYGRRISIGLVAANSIAEAGIGFAQVPVVDDPYVLVVPERLNLDGI
                     EDPERQLPAILPTPPFLVRPALSNF"
     gene            complement(887..1807)
                     /locus_tag="VHZ56_03650"
     CDS             complement(887..1807)
                     /locus_tag="VHZ56_03650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014527576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX4297092.1"
                     /translation="MSEFTLRQLRALAAVHRTGKIISASRELGLTQPAVSLQIKEAES
                     VAGTALFDRTATGMRPTAAGRAVIEAALAIEERLRELSDEVRALSSGQKGRLRLGVVS
                     TAKYFAPSIMAAFKRVFVDVEMTLFVGNRAEIINSLRDRAVDVALMGRPPREVAVRAV
                     MFGGHPFLIIAPPDHRLAGLKAIPKEQLAPETFLVREPGSGTRMALDMFLSELPGRLE
                     NPGLEMGSNETIKQAVMAGLGIALLSAHTIALEVEQKRLTVLDVEGMPIWRQWFSISR
                     AERTLTPVMKAFEDFLLARGSAFLPRVDGA"
     gene            1925..2977
                     /locus_tag="VHZ56_03655"
     CDS             1925..2977
                     /locus_tag="VHZ56_03655"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HEX4297093.1"
                     /translation="MTAGTLGEYLSAHGASGAPHAEAVVETVVALARGAVAIRDAVSL
                     GALGTAFVGTGRGTPGAGGDIPKDLDLHADALLLDAVRFAPVALYASEEIEHPILVNR
                     GAPLAIATDPLDGSSNIDTNVSIGTIFSVLPTVGVPDSNALQSFLQPGRNQLAAGFFI
                     YGPQLALALSVGKGTDIFVYSPRIGVFVRAYPTVSVPHATREFAINAANYRHWDDGVR
                     HYYDDCVQGATGPHGRDFNMRWVASMVADAYRILVRGGIYMYPGDARKGYANGRLRLV
                     YEAHPIAMLMEQAGGMATDGTLPILERTATSLHEKVPLVFGSRQEVLQVARYAAEHDS
                     MGLRSPLFGMRGLFRN"
     gene            2989..3861
                     /locus_tag="VHZ56_03660"
     CDS             2989..3861
                     /locus_tag="VHZ56_03660"
                     /EC_number="2.7.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014763848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008974 - phosphoribulokinase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribulokinase"
                     /protein_id="HEX4297094.1"
                     /translation="MTAAHPIISITGSSGAGTTSVKRIFELIFRREKVAAAFIEGDAF
                     HRFNRADMKARIAEEDARGNPNFSHFNAEANELDQLASIFEEYGREGAGRTRSYVHDD
                     DESKIYGVPEGTFSPWREFEPSDLLFYEGLHGCAVTATANVAQHADLRIGVVPVINLE
                     WIQKIHRDKATRGYSPEAVMDTIIRRMPDYVRYITPQFSRTQINFQRVPVVDTSNPFI
                     ARWIPTPDESMLVIRFADPRGIDFPYLLSMINDSFMSRANTIVMAGNKLDLAMQLILT
                     PLILQLIERKRRNS"
     gene            3863..4474
                     /gene="pgk"
                     /locus_tag="VHZ56_03665"
     CDS             3863..4474
                     /gene="pgk"
                     /locus_tag="VHZ56_03665"
                     /inference="COORDINATES: protein motif:HMM:NF012389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEX4297095.1"
                     /translation="MVTLPDIRDAQLDGKTVLLRADLNVPFAGVAIADRSRIRRAAAT
                     ISGLVNRGARVVVMAHLDRPRGVANPVMSFAPVAVALADELNRSVRFVPDSIGAIAER
                     WTRSLPESSVALLENLRFHAEEEENDRAFAMMLSVHGDLYVNDAPSSSIRQHASIHAI
                     VPLMRAFAGPQLMAHVAQLDEAEALALPGVAALMSKREVLEKT"
     gene            4474..5556
                     /gene="fba"
                     /locus_tag="VHZ56_03670"
     CDS             4474..5556
                     /gene="fba"
                     /locus_tag="VHZ56_03670"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010975101.1"
                     /note="catalyzes the reversible aldol condensation of
                     dihydroxyacetonephosphate and glyceraldehyde 3-phosphate
                     in the Calvin cycle, glycolysis, and/or gluconeogenesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HEX4297096.1"
                     /translation="MARITLRQLLEHAGEYGYGVPAFNINNMEQALAIMEAARDVDAP
                     VILQASRGARSYAGDIMLGRIIDALEEMFPHIPLCMHQDHGNNVATCLSAIQHGYTSV
                     MMDGSLREDAKTPSDYAYNVAITSEVSRLAHFVGASVEGEIGVLGSLETGEGEAEDGV
                     GFEGRLQRHMLVTDPEEAARFVAATKVDALAVAIGTSHGAYKFTRQPSGEILAMDIIE
                     KLHELLPNTHLVMHGSSSVPKEWQDVFNAHGGKMRETWGVPVEEIVRGIRHGVRKINI
                     DTDLRLAATAAFRKAGATDPTEFDPRKFLKPAIDAMRKVCRERFEAFGTAGNASKIKV
                     IPMSEMAKRYASGALDPRTSASMIAA"
     gene            5588..7066
                     /locus_tag="VHZ56_03675"
     CDS             5588..7066
                     /locus_tag="VHZ56_03675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011969556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="form I ribulose bisphosphate carboxylase large
                     subunit"
                     /protein_id="HEX4297097.1"
                     /translation="MNAQTETKAHSTELKGKERYRAGVLKYAQMGYWNGDYVPKDTDI
                     LALFRITPQDGVDPIEAAAAVAGESSTATWTVVWTDRLTAADQYRAKAYRVEPVPNNP
                     GQWFAYIAYDLILFEEGSIANLTASIIGNVFGFKPLKALRLEDMRLPVAYVKTFKGPA
                     TGIVMERERLDKFGRPLLGATTKPKLGLSAKNYGRVVYEGLKGGLDFMKDDENINSQP
                     FMHWRDRFLYCMEGVTKAAAATGEVKGHYLNVTAGTMEEMYKRAELAKEIGSTIVMID
                     LVIGYTAIQSMANWSRQNDMILHLHRAGHGTYTRQKTHGVSFRVIAKWMRLAGVDHIH
                     AGTSVGKLEGDPMTVQGYYNVLREIKNEIDLPRGIYFEQDWADIKKVMPVASGGIHAG
                     QMHQLIDLFGDDVVLQFGGGTIGHPMGIQAGATANRVALEAMVLARNEGRDIKNEGPE
                     ILRAAAKWCKPLEAALDVWGDISFNYQSTDTSDYVPSVGVSA"
     gene            7085..7474
                     /locus_tag="VHZ56_03680"
     CDS             7085..7474
                     /locus_tag="VHZ56_03680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose bisphosphate carboxylase small subunit"
                     /protein_id="HEX4297098.1"
                     /translation="MRVTQGTFSFLPDLTDEQITAQVEYCLNNNWAIGVEYTDDPHPR
                     NYLWEMWGNPMFDLRDAAGVMMEVRACRKAFPNFYIRLNAFDSTRGFETVRLSFIVNR
                     PKVEPTFKYTRTEVAGRTVNVTMTTEY"
BASE COUNT         1370 a         2499 c         2396 g         1291 t
ORIGIN      
        1 gctgtgcaaa ggaacgccgc tccacaatct atcggtgcaa taggtctcgt ctatacgtta
       61 gcgtttgggg tgttcttggt tagaaattgg atagagccgg ccgcaccagg aagggcgggg
      121 tcggcagaat cgccggcagc tggcgttccg ggtcctcgat gccgtcgagg ttcagccgtt
      181 ccggaaccac cagcacgtaa gggtcgtcga cgaccggcac ctgcgcgaag ccgatcccgg
      241 cctcggcgat ggaattggcg gcgacaaggc cgatacttat gcgccggccg tagagcattt
      301 ccagcacgtc tgccggggcg ctctcctgga tgtcgtagtc ggccgcggga tgcaggttct
      361 gcatttggct aatggcttcg ggcaggatga cgcgcagcgc cgaattgatg ccggcgatgc
      421 gcaccgtgac acgcttgccg tcgctgtatt gggcgagccc gtcctcgatc tcgcgcatgc
      481 cacgcagcac ctgctcggct cgcggcatca ggtaattgcc ggcctcggtg agcaccatct
      541 cgccggagcg gcggtggaac agctgcgcgc cgacggtggt ttcgagcttg ctcaactgct
      601 gcgacagcga gggctgggcg aggccgagct gcttggccgc cttggtcagc gtttccgaat
      661 gcgcaatggc ccagaacacc cgcagctggt gcacggtgac ttcgctgcgc ttctggctcc
      721 ccggcgtgcg gcgcgggccg gctgccgact ggtttcgggg caggtccaat cctcccagca
      781 ctagcgccag cctttcggcg tcgtcatcca tcgtccggct cctcgattga gaagctaggg
      841 ggatgcatcc tcggactttc caatgttgac tattgctatg cggggttcag gcgccatcga
      901 ccctgggcag gaaagcagag ccgcgggcga ggagaaagtc ctcgaacgcc ttcatcaccg
      961 gggtcagggt gcgttcggcg cgcgatatcg agaaccactg ccgccagatc ggcatgccct
     1021 cgacgtcgag cacggtcagt cgcttctgct ccacctcgag ggcaatggtg tgggccgaga
     1081 gcagcgcaat gccgaggccg gccatcacgg cctgcttgat ggtttcgttc gagcccattt
     1141 cgaggccggg gttttcaagc cggccgggca actcgctcag gaacatgtcg agcgccatgc
     1201 gggtgcccga cccgggctcg cgcacgagga aggtttctgg cgccagctgc tctttgggga
     1261 tggcctttag gccggcgagc cggtggtcgg gcggggcgat tatgaggaaa gggtggcccc
     1321 cgaacatcac cgcgcgcacc gccacctcgc gcggcggccg gcccatcagc gccacgtcga
     1381 ccgcgcggtc gcgcaggctg ttgatgattt cggcgcggtt gccgacgaac agcgtcatct
     1441 cgacatcgac gaatacccgc ttgaacgccg ccatgatcga gggcgcgaaa tatttcgccg
     1501 tcgacacgac cccgagccgc agccggccct tctggccgct cgacagcgcc cgtacctcgt
     1561 cgctcagctc gcgcagtctt tcctcgatgg cgagggcggc ctcgatcacg gcccggcctg
     1621 cggcagtggg acgcataccg gtcgccgtgc ggtcgaagag cgccgtgccg gccaccgact
     1681 ccgcctcctt gatctgaagc gatacggcag gctgcgtcag gcccaactcc ctggatgcgc
     1741 tgatgatctt gccggtccgg tgcacggcgg ccagggcccg gagctgccga agggtaaact
     1801 cgctcatggc agccatattt gtatttctta tatgagacgt aaagacttca aaatttactt
     1861 atgccccgcg aacgcggcaa tcttcctcaa cgcagccatc aacgagctgc gggaggaacg
     1921 ggaagtgacg gctggcacgc ttggggaata tttgtcggca cacggcgcca gcggcgcgcc
     1981 tcatgccgag gccgtggtcg aaaccgtggt ggcgctggcg cgcggcgcgg tggccattcg
     2041 cgatgcagtg agcctcggcg cgcttggcac ggccttcgtt ggtactggta gaggcacgcc
     2101 gggcgccggc ggcgacatcc ccaaggatct cgacctgcat gccgatgcgc tgctgctcga
     2161 tgcagtgcgg ttcgcgccgg tggcgcttta tgcctccgag gaaattgagc atccgatcct
     2221 cgtcaatcgc ggcgcgccgc tggcgatcgc gaccgatccg ctcgacggct cgtccaacat
     2281 cgacacgaac gtctcgatcg gcacgatctt ttcggtgctg cccaccgtgg gcgtacccga
     2341 cagcaacgcg ctgcagagct tcctccagcc aggccgcaac cagcttgccg ccggcttctt
     2401 catctacggg ccgcagctgg cgctggcgct gtcggtgggc aagggcaccg acatcttcgt
     2461 ctactcgccg cgcatcggcg tgttcgtgcg cgcctatccg accgtgagcg tgccgcacgc
     2521 gacgcgggaa ttcgccatca atgctgccaa ctaccggcac tgggacgacg gcgtgcgcca
     2581 ctattacgac gactgcgtgc agggcgctac ggggccgcat ggccgcgact tcaatatgcg
     2641 ctgggtcgcc tcgatggtgg ccgatgccta ccgtatcctg gtgcggggcg gcatctacat
     2701 gtacccgggc gatgcccgca aaggctacgc caatggccgg ctgcggctgg tctacgaggc
     2761 ccatccgatc gccatgctga tggagcaggc gggtggcatg gcgaccgatg gcacgctgcc
     2821 gatccttgaa cgtactgcca ccagcctgca cgaaaaagtg ccgctggtgt tcggctcgcg
     2881 ccaggaggtg ctgcaggtcg cgcgctacgc agcagaacat gattccatgg ggctccgctc
     2941 gccgttgttc ggcatgcgcg gcctgttccg gaactaggag cgccggaaat gaccgcagca
     3001 catcccatca tttcgatcac cggctcgtcc ggcgccggca ccacctcggt caagcgcatc
     3061 ttcgagctga tcttccggcg cgagaaggtc gcggccgcct tcatcgaagg cgacgccttc
     3121 caccgcttca accgcgccga catgaaggcg cggatcgccg aggaagacgc caggggcaac
     3181 ccgaacttct cgcacttcaa cgccgaggcc aacgagctcg accagctcgc ctcgatcttc
     3241 gaggaatatg gccgcgaggg ggcagggcgc acccgcagct atgtgcacga cgacgacgaa
     3301 tcgaagatct acggcgtgcc ggagggcacc ttcagcccgt ggcgcgagtt cgagccgtcg
     3361 gacttgctgt tctatgaggg cctgcatggc tgcgcggtga ccgcgaccgc caacgttgcg
     3421 cagcacgccg accttcggat cggcgtcgtg ccggtgatca atctcgagtg gatccagaag
     3481 atccatcgcg acaaggccac gcgcggctat tcgcccgaag cggtgatgga caccatcatc
     3541 cggcgcatgc ccgactatgt gcgctacatc acgccgcagt tctcgcgcac ccagatcaac
     3601 ttccaacgcg tccccgtcgt cgacacctcc aacccgttca ttgcgcgctg gatcccgacg
     3661 cctgacgaat caatgctggt gatccgcttc gccgatccac gcggcatcga cttcccgtat
     3721 ctgctgtcga tgatcaacga ctcgttcatg tcgcgcgcca acaccatcgt gatggccggc
     3781 aacaagctcg acctcgccat gcagctcatc ctgacgccgc tgatcctcca gctgatcgag
     3841 cggaagcgta ggaactcatg acatggtgac gctgcccgac attcgcgatg cccagctcga
     3901 tggcaagacg gtgctgctgc gcgccgatct caacgtgcca ttcgccggcg tagcgattgc
     3961 cgaccgctcc cgcatccgcc gggcggcggc gacgatcagc gggctggtca accgcggtgc
     4021 ccgggtcgtg gtcatggcgc atctcgaccg gccgagagga gtggccaatc cggtgatgtc
     4081 gttcgcgccg gtcgcggttg cccttgccga tgagctcaac cgcagcgtgc gcttcgtgcc
     4141 cgacagcatc ggcgccatcg cggagcgctg gacgcggtcc ttgcccgaaa gcagcgtggc
     4201 gctgctcgag aatctccgct tccacgctga agaggaggag aacgatcgcg cctttgccat
     4261 gatgctctcg gtgcatggcg atctctatgt caacgacgcc ccatcgagct cgatccgcca
     4321 gcacgcgtcg atccacgcca tcgtgccgct gatgcgcgcc tttgccggcc cgcagctcat
     4381 ggcccacgtg gcgcagctcg acgaggccga ggccctcgct ctgccgggcg tcgccgcact
     4441 gatgtccaag cgcgaagttc tggagaaaac ctgatggccc gcatcacgct gcgccaattg
     4501 ctcgagcacg ccggcgaata cggctacggc gtgccggcct tcaacatcaa caatatggag
     4561 caggcgctcg ccatcatgga ggcggcgcgc gatgtcgatg cgccggtgat cctgcaggcg
     4621 agccgaggcg cgcgttccta tgccggcgac atcatgctcg gtcgcatcat cgatgcgctc
     4681 gaggagatgt tcccccatat cccgctctgc atgcaccagg accacggcaa caatgtcgcg
     4741 acctgcctca gcgccatcca gcacggctac acctcggtga tgatggacgg ctcgctcagg
     4801 gaagatgcca agacgccgtc ggactacgcc tacaatgtcg ccatcacctc ggaagtgtcg
     4861 cggctggcac atttcgtcgg cgcttcggtc gaaggcgaga tcggggtgct gggcagcctc
     4921 gagacgggcg agggtgaagc cgaggacggc gtcggcttcg agggcaggct gcagcgccac
     4981 atgctggtga cggaccccga ggaagcagcg cgcttcgtcg ccgccaccaa ggtcgatgcg
     5041 ctcgccgtcg ccatcggcac cagccacggc gcctacaaat tcactcgcca gccgagcggc
     5101 gaaatcctcg ccatggacat catcgagaag ctgcacgaat tgctgcccaa tacgcacctt
     5161 gtcatgcacg gctcatcgtc ggtgccgaag gaatggcagg acgtgttcaa cgcccatggc
     5221 ggcaagatgc gcgagacctg gggcgtgccc gtcgaagaga tcgtgcgcgg catcaggcac
     5281 ggcgtgcgca agatcaatat cgataccgac ctccgcctcg ccgccactgc cgccttccgc
     5341 aaggccggcg cgaccgatcc caccgagttc gatccgcgaa aattcctgaa gccggccatc
     5401 gacgcgatgc gcaaggtctg ccgcgaacgc ttcgaagcgt ttggcaccgc cggcaacgcc
     5461 tcgaaaatca aggtcatccc gatgagcgag atggccaagc gctatgcgtc gggggcgctc
     5521 gatccgcgca cctctgcctc gatgattgcc gcgtagcggc gcaagtttca gtagaaagga
     5581 cttccagatg aacgcgcaaa ccgagaccaa ggcgcacagt accgagctca aggggaagga
     5641 gcgctatcgc gccggcgtgc tcaaatacgc ccagatgggc tactggaacg gcgactacgt
     5701 gcccaaggac accgatatcc tggcgctgtt ccggatcacc ccgcaggacg gcgtcgatcc
     5761 gatcgaggcg gcggcggcgg tggccggcga gagctcgacg gcaacctgga ccgtggtctg
     5821 gaccgaccgc ctcaccgccg ccgaccagta ccgcgccaag gcctaccggg tcgagccggt
     5881 gccgaacaat ccaggccagt ggtttgccta tatcgcctac gacctgatcc tgttcgagga
     5941 gggctcgatc gccaacctca cggcgtcgat catcggcaat gtcttcggct tcaagccgct
     6001 caaggccctg cgcctcgagg acatgcggct gccggtggcc tatgtgaaga ccttcaaggg
     6061 tccggcgacg ggtatcgtca tggagcgcga gcggctcgac aagttcggcc ggccgctgct
     6121 cggcgccacc acaaagccga agctcggcct ttcggccaag aactacggcc gcgtggtgta
     6181 tgagggcctc aagggcggcc tcgacttcat gaaggacgat gagaatatca actctcagcc
     6241 cttcatgcat tggcgcgacc gcttcctcta ctgcatggag ggcgtgacca aggcggcggc
     6301 ggcgaccggt gaggtcaagg gccactacct caacgtcacc gccggcacga tggaggagat
     6361 gtacaagcgc gccgagctcg ccaaggagat cggctcgacc atcgtcatga tcgacctggt
     6421 gatcggctac accgccatcc agtcgatggc gaactggtcg cgccagaacg acatgatcct
     6481 gcatctgcat cgcgcgggcc acggcaccta cacccggcag aagacgcacg gcgtctcgtt
     6541 ccgcgtcatc gccaagtgga tgcgccttgc cggcgtcgac cacatccatg ccggcacgtc
     6601 ggtcggcaag ctcgagggcg atccgatgac cgtgcagggc tactacaacg tcctgcgcga
     6661 gatcaaaaac gagatcgacc tgccgcgcgg catctatttc gagcaggatt gggccgacat
     6721 caagaaggtg atgccggtcg cttcgggcgg catccacgcc ggccagatgc accagctgat
     6781 cgacctgttc ggcgacgatg tcgtgctgca gttcggcggc ggcaccatcg gccatccaat
     6841 gggcatccag gccggcgcca cagccaatcg tgtcgcgctc gaggcgatgg tcctcgcccg
     6901 caacgaaggt cgcgacatca agaacgaagg cccggaaatt ctccgtgccg ccgccaagtg
     6961 gtgcaagccg ctggaggccg ccctcgatgt gtggggcgac atttcgttca actaccagtc
     7021 caccgatacg tcggactacg tgccgtccgt cggcgtcagc gcctaaccgt caggagatca
     7081 tgacatgcga gttacacagg gcacgttttc cttcctgccc gatctgacgg acgaacagat
     7141 cacggctcag gtcgagtact gcctcaacaa caactgggcc atcggcgtcg agtacaccga
     7201 cgatccgcat ccgaggaact atctctggga gatgtggggc aatccgatgt tcgacctgcg
     7261 cgacgcggcg ggggtgatga tggaagtgcg ggcctgccgc aaggccttcc cgaacttcta
     7321 catccgcctc aacgccttcg actcgacgcg cggcttcgag acggtgcggc tgagcttcat
     7381 cgtcaatcgc ccgaaggtcg aaccgacctt caagtacacc cgcaccgaag tcgccggccg
     7441 gaccgtcaac gtcacgatga ccaccgagta ctgatgtcga ccacgattgt agcaaggggg
     7501 gaggcgccgc ccgaggcgcc cccggctccc gaaataccgc cgacctcgat cgacct
//
LOCUS       DATAZA010000143         7705 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2103566, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000143 DATAZA010000000
VERSION     DATAZA010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 7705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7705
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2103566"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..1083)
                     /locus_tag="VHZ56_03685"
     CDS             complement(13..1083)
                     /locus_tag="VHZ56_03685"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4297099.1"
                     /translation="MTETSERIAGAKIAAPRGAANPLRGVSQFIGPENFALLVALVVL
                     VVLISTQTPYFFVPRNLLNVGMNISVVGLLAVGMTFVIVSNGLDISVGSMAGVASISS
                     AIMVTYLHSVVGGVLVGIAFGAVLGAVNATIITYLRVNPVVATLATLSAYQGLAFLIA
                     PGGRPIGVLDQTFALLGSGRLLEIGGFPGIPISFVILVVVAAAGYFVLRSTVFGRSVY
                     AMGGNPAAARLAGINLTRMKYYIYILSGALSGLAGVIVTARTSSGQPSSGTAGLELET
                     ITSVFLGGAILAGGKGTIVGSMLAVLLLGVLSNGMNLLGIPTFYQLVAKGFLLVVAVA
                     VGQFRVARAEKAQAAAAAQVKG"
     gene            complement(1107..2600)
                     /locus_tag="VHZ56_03690"
     CDS             complement(1107..2600)
                     /locus_tag="VHZ56_03690"
                     /EC_number="7.5.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019860186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HEX4297100.1"
                     /translation="MSDAILEISGVSKAFPNVRALTDLSFSVGRGEVVAFVGENGAGK
                     STLLKILSGDYRADTGTITLDGNDISRVDPLSAREAGFRLVRQEPEIVPHVTAAENIF
                     LGELPRRGAVVDVAAMRRQTVDLFAQGGFTGFLSPDDLGDRLSPAQKHVIEITRALKP
                     GVRVVAFDEPTSSLTAEETARLFALIRRLKREGLGIVYVTHRLHEVMEISDRVAVLRD
                     GQLVGIVPTAGTAQETIVRMMVGRDLAKGFERTETTRNEVVLEVKGINSIWHRDVGFS
                     IRSGEIVGFAGLVGAGRTELAKVIFGEYPRKSGSVTVLGRPVPPNSPAKAIRLNIGFA
                     PEDRKGEGLILVRSVLENASLAVFSALSRWGILRSRMMVDTVAPLIASLDIKTPSLEQ
                     EVGKLSGGNQQKVVLARWLAAKPRVLILDEPTRAVDVGAKAEIYRLIDGLARDGMAIM
                     LISSEMPELLALSDRIVVMQGGRLSPPVEKRAATEESILRLALGQAA"
     gene            complement(2701..3678)
                     /locus_tag="VHZ56_03695"
     CDS             complement(2701..3678)
                     /locus_tag="VHZ56_03695"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX4297101.1"
                     /translation="MTRFTRLLGHALVLGGFVVAGCAGTALAQDKTIVAIYKSGTQQY
                     FIDEAKGFVDAAKAAGYDAKTINVELDANKGVSAMTDAISSGAKGIAMTAPDQAIGPA
                     VAKAAADAKIPFVSTDDSLKDADGNTVPFVGFDGTDMGNKVGQEAGDLFKAANWSGEK
                     YGVLSVEVQTLSVCNDRTNAEKAQITAAGADPSKIFPVAYDGTTNAALNAAGPVITAH
                     PDVNKWVVFGCNDEGTLGTLNALTNAGFAPDDIIVVGLGAYEACHPWAAGQPSGFKAA
                     LYISGVDVGSAAATALINAIDKNTPLPPKTIAKTTIVTPDNYKSVMTCQ"
     gene            3827..4600
                     /locus_tag="VHZ56_03700"
     CDS             3827..4600
                     /locus_tag="VHZ56_03700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019860182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4297102.1"
                     /translation="MERFGGKIAIVTGAGQGIGEAIARRLAQEGARVVIAEIDPAVGA
                     AAARDISAATGNAARFIRTDVADTASVDAMVAETVAEIGAPDVLVNNAGIAVFGEPLA
                     MTDADWTRCMSVDLDGVWRCCRAVLPHMLQAGHGAIVNIASNHSFQVIKHTFPYPIAK
                     HGVLGLTRSLALEYAAQGVIVNAISPGYIDTPLNQRMFAADPDPQARQKVEARQVLGR
                     LGRPDEIAAVAALLASDEARFIVGANIVVDGGIQIRMYE"
     gene            4611..5510
                     /locus_tag="VHZ56_03705"
     CDS             4611..5510
                     /locus_tag="VHZ56_03705"
                     /EC_number="3.1.1.99"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX4297103.1"
                     /translation="MSIAVSRAVAAQNLLGEGAFWDARRQRLWWVDVPMPAKLQMLEP
                     ATGKVETHAMPQMVMSVRAKRDGSGLLLATHSGIGSFDYAGGTLTHLVNPEPDKPFNR
                     SNDGGTDARGRFWFGTMQNNIAPDGSGIAIVSSAGTLFRLDPDMRVSAHDSGIMISNT
                     VCWSPDNRTMYFSDTATHTIFAYDYDLDAGQIRNKRAFATFERGDPDGSTVDADGCLW
                     NARWDGSCVVRFTPQGKVDTVIEVPVAKPTSCAFGGPDLADLYITTARYGGTPEALAA
                     TPLAGDLLVCRPGATGLPQPEFG"
     gene            complement(5507..6601)
                     /locus_tag="VHZ56_03710"
     CDS             complement(5507..6601)
                     /locus_tag="VHZ56_03710"
                     /inference="COORDINATES: protein motif:HMM:NF019113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 88 protein"
                     /protein_id="HEX4297104.1"
                     /translation="MTELRGDDLGLLARVAHQLEQHEFKGWFYGDSVGFEGLVAAGDM
                     LGVATWQDFSRGFFRAWATRMEPFQPDDNTAPGHVMCEMVRRTGDEVLRGAVLRLAEH
                     LYGRRRVRGIGITFEDTLRALRQPYGGVPLSPAEQELMQNPGAGVWLDCMHFDPPFYA
                     HLGAIGGGPQWAGRAVDEILAYCDLLIDPELGLYQHYWLERTGRAYIRGWGRGQGWAL
                     LGLLDVVAHADPATPRHAEVVTRTRDLADAMRRWQLADGNWWAMVHEPQSGPESSTAA
                     FMACAFYRGIRLGVLPADSFREPADRAFAAMSANLDADGNLQGVSAAVYAALVQEHYW
                     HVPRGLIVPWGQGPVLTAALARRQLLAAGA"
     gene            complement(6610..7398)
                     /locus_tag="VHZ56_03715"
     CDS             complement(6610..7398)
                     /locus_tag="VHZ56_03715"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX4297105.1"
                     /translation="MKPDNAPARSKAIGGLMPVRGVLGEIVGGLGRRVVSGEWAHGAA
                     LPTEAALMAELGVGRSVVREAIRILNAKGLVRSRQMEGTTVLPRASWRLLDPDLIQWR
                     MQAADRNALLRDLLQVRLVLEPGVVWNATAFGSPAAKARIHAAWQGWLAVFSETSTPG
                     DQRAHFISHDLEFHRAFLATVQSELLEQLFSVIEAALTLMIDVQMQARGSKTSLVGME
                     DTNRLHQDVYDAFAADDPDGAERAMRRLIQGAMADARVGFALSE"
     gene            complement(7496..>7705)
                     /locus_tag="VHZ56_03720"
     CDS             complement(7496..>7705)
                     /locus_tag="VHZ56_03720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019856814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297106.1"
                     /translation="WLVMNYMIADGLRLAGETAIADRIVADSLDLITRSGFAEYYDPL
                     TGEPCGGGRFTWTAAMVLEFLASRR"
BASE COUNT         1259 a         2546 c         2749 g         1151 t
ORIGIN      
        1 ggcggcatcg gctcagccct tgacctgcgc ggcggcagcg gcctgggcct tctcggcgcg
       61 ggcgacgcgg aactgcccga cggcgaccgc gacgaccagc aggaagccct tggcgacgag
      121 ctggtagaag gtcgggatgc cgagcaggtt catgccgttg ctgagcacgc cgagcagcag
      181 cacggcaagc atcgagccga cgatggtgcc cttgccgccg gcgaggatgg cgccgccgag
      241 gaacaccgag gtgatggtct cgagctcgag cccggcggtg cccgaagacg gctggccgga
      301 gctggtgcgg gcggtgacga tgacgccggc aaggcccgaa agcgcccccg atagaatgta
      361 gatataatac ttcatccgcg tcaggttgat gccggcgagg cgggctgccg ccgggttgcc
      421 gcccatggcg tagacggagc ggccgaagac ggtggagcgc agcacgaaat agccagccgc
      481 cgcgaccacc acgaggatga caaaggagat cgggatgccg gggaagccgc cgatttcgag
      541 caggcggccg gagccgagca gcgcgaaggt ctggtcgagc acgccgatcg gccggccccc
      601 tggggcaatg aggaaggcca gcccctggta ggccgagagg gtggcgagcg tcgccaccac
      661 cggatttacc cgcagatagg tgatgatggt ggcgttgacg gctcccagca cggcgccgaa
      721 ggcgatgccg acgagcacgc cgccgacgac cgaatgcagg taggtcacca tgatcgccga
      781 ggagatcgag gcgacgccgg ccatcgagcc gacggaaatg tcgaggccgt tggagacgat
      841 gacgaaggtc atgccgacgg cgagcagccc gaccaccgag atgttcatgc cgacgttcag
      901 caggttgcgc ggcacgaaga aatacggcgt ctgcgtgctg atcagcacca ccagcacgac
      961 gagcgccacc agcagcgcga agttctccgg cccgatgaac tgcgatacgc cgcgcagcgg
     1021 attggcggcg ccgcgcggcg cggcgatctt ggcccctgca atccgttccg acgtctcggt
     1081 catgcgttcc tgtcctccga tgccgctcag gcggcctgtc ccagtgccag cctgaggatg
     1141 ctctcctcgg tggccgcccg cttctcgacg ggcggcgaca gccgtccgcc ctgcatcacc
     1201 acgatgcggt cggagagggc cagcagttcc ggcatctccg aggaaatcag catgatcgcc
     1261 atgccgtcgc gcgccagccc gtcgatcagc cggtagattt cggccttggc gccgacgtcg
     1321 acggcgcgcg tcggctcgtc gaggatcagc acacgcggct tggccgcgag ccagcgggcc
     1381 agaacgacct tctgctggtt gccgcccgaa agcttgccga cttcctgctc cagcgacggc
     1441 gtcttgatgt cgagcgaggc gatcagcggg gcgacggtgt cgaccatcat gcgcgagcgc
     1501 aggatgcccc agcggctgag cgccgaaaac accgcgagcg aagcgttctc cagcaccgag
     1561 cggacgagga tcaggccctc acccttgcgg tcctcgggag caaagccgat gttgagccgg
     1621 atcgccttgg cgggcgaatt gggcggcacc ggccggccca gcaccgtgac gctgccgctc
     1681 ttgcgcgggt actcgccgaa gatgaccttg gcgagctcgg tgcggccggc gccgacaagt
     1741 ccggcaaagc cgacgatctc gccgctgcgg atggaaaagc cgacatcgcg gtgccagatg
     1801 ctgttgatgc ccttgacctc gagcacgacc tcgttgcgcg tcgtctcggt gcgctcgaaa
     1861 cccttggcga ggtcgcgccc gaccatcatg cggacgatgg tttcctgcgc cgtgccggcg
     1921 gtggggacga tgcccaccag ttgcccgtcg cgcagcaccg cgacgcggtc ggaaatctcc
     1981 atcacctcgt gcaggcggtg ggtgacgtag acgatgccca gcccttcgcg cttcagcctg
     2041 cggatcagcg cgaacaggcg cgccgtctcc tcggcggtga gcgaggaggt gggctcgtcg
     2101 aaggcgacga cgcggacacc gggcttcagc gcccgggtga tctcgatgac gtgcttttgc
     2161 gccggcgaca ggcggtcgcc caggtcgtcg ggactgagga agccggtgaa gccgccctgc
     2221 gcgaagagat cgacggtctg ccggcgcatg gcggcgacat cgacgacggc gccgcggcgc
     2281 ggcagctcgc ccagaaagat gttctcggcg gcggtgacgt gcgggacgat ctcgggttcc
     2341 tggcggacca ggcggaagcc ggcctcgcgg gcgctcagcg gatcgacgcg gctgatgtcg
     2401 ttgccatcga gggtgatggt gccggtgtcg gcgcggtagt cgccggagag gatcttgagc
     2461 agcgtcgact tgccggcgcc gttctcgccg acgaaggcca cgacttcgcc gcggccgacg
     2521 ctgaacgaca ggtcggtgag cgcccgcaca ttggggaacg ccttgctgac cccgctgatc
     2581 tcgagaatgg cgtcgctcat gagcggaaat ccgtcgatcg ctctcggcag ggaactgccc
     2641 ggaaaaatgg aggccggcgc ctggaaggga gcgccggccc gtcgagcgtt cagactgccg
     2701 ctactggcag gtcatcacgc tcttgtagtt gtcgggagtg acgatcgtgg tcttggcgat
     2761 cgtcttgggc ggcaacggag tgttcttgtc gatggcgttg atcagggcgg tggcggcggc
     2821 gctgccgacg tcgacgcccg agatgtagag cgcggccttg aagcccgagg gctggcctgc
     2881 ggcccagggg tggcaggctt cgtaggcgcc aaggccgacg acgatgatgt cgtccggcgc
     2941 aaagccggca ttggtcagcg cgttgagggt gccgagcgtg ccttcgtcgt tgcagccgaa
     3001 caccacccat ttgttgacgt cgggatgggc ggtgatgacc ggaccggcgg cattgagggc
     3061 ggcgttggtg gtgccgtcat aggcgaccgg gaagatcttg gacgggtcgg cacccgcggc
     3121 ggtgatctgc gccttctcgg cattggtgcg gtcgttgcac accgacaggg tctgcacttc
     3181 gacgctcagc acgccgtatt tctcgcccga ccagttggcg gccttgaaca ggtcgccggc
     3241 ttcctggccg accttgttgc ccatgtcggt gccgtcgaag ccgacgaacg gcacggtgtt
     3301 gccgtcggca tccttcagcg aatcgtcggt cgacacgaac gggatcttgg cgtcggcggc
     3361 ggccttggcg acggccggcc cgatggcctg gtcgggggcg gtcatggcga tgcccttggc
     3421 gcccgacgag atggcgtcgg tcatggcgct gacgcccttg ttggcatcga gctcgacgtt
     3481 gatggtcttg gcgtcatagc cggccgcctt ggcggcgtcg acgaagccct tggcctcgtc
     3541 gatgaagtac tgctgggtgc cgctcttgta gatggcgacg atggtcttgt cctgcgccag
     3601 cgccgtaccg gcacagccgg cgacgacgaa gccgcccagc accagtgcgt gcccgagcag
     3661 tcgggtaaat ctggtcatta ggtcctccct gaccgatgtg aaactctctc ccatcggggc
     3721 cggcttgacg accggcctcc gattgacggg catgacgttt agctgtttat catacaaagt
     3781 caacgcgccg cggacaacga tcggcgcggg acaatcggag gttggagtgg agcggttcgg
     3841 gggcaagatc gccatcgtca ccggtgccgg ccaaggcatc ggcgaagcca tcgcgcggcg
     3901 cctggcgcag gaaggcgcgc gggtggtgat cgccgagatc gacccggccg tcggcgcggc
     3961 ggcggcgcgc gatatctcgg cggcaacggg caacgcggcg cgcttcatcc gcaccgacgt
     4021 cgccgacacc gcgagcgtcg atgcgatggt ggcagagacc gtggccgaga tcggggcgcc
     4081 ggacgtcctc gtcaacaatg ctggcatcgc ggtgttcggc gaaccgctcg cgatgaccga
     4141 tgcggactgg acccgctgca tgtccgtcga tctcgacggg gtgtggcgct gctgccgggc
     4201 ggtgctgccg cacatgctgc aggcgggcca tggcgccatc gtcaacatcg cctcgaacca
     4261 ctcgttccag gtgatcaagc acaccttccc ctaccccatc gccaagcacg gcgtgctcgg
     4321 cctgacccgc tcgctggcgc tcgaatacgc ggcgcagggg gtgatcgtga acgctatttc
     4381 gccggggtac atcgataccc cgctcaacca gcggatgttc gcggccgatc ccgacccgca
     4441 ggcgcgccag aaggtcgagg cgcggcaggt gctcggccgg ctgggccggc ccgacgagat
     4501 cgcggcggtg gcggcgctgc tcgcctcgga cgaggcgcgc ttcatcgtcg gcgccaacat
     4561 cgtcgtcgac ggcggcatcc agatccgcat gtacgaatga ggaggcaggg atgagcattg
     4621 ccgtatcgcg ggcggtcgcc gcgcagaacc tgctcggcga aggcgccttc tgggacgcgc
     4681 ggcgccagcg cctgtggtgg gtcgacgtgc cgatgccggc caagctgcaa atgctcgagc
     4741 cggcgacggg gaaggtcgag acccacgcca tgccacagat ggtgatgagc gtgcgggcga
     4801 aacgcgacgg cagcgggctg ctcctcgcga cgcacagcgg catcggcagt ttcgactatg
     4861 ccggcggcac gctgacgcat ctggtcaatc cggaacccga caagccgttc aaccgctcga
     4921 acgatggcgg caccgacgcg cgcgggcggt tctggttcgg caccatgcag aacaacatcg
     4981 cgcccgacgg atcgggcatc gccatcgtgt catcggctgg aacgctgttc cggctggatc
     5041 cggacatgcg ggtcagcgcc cacgacagcg gcatcatgat ctcgaacacg gtgtgctgga
     5101 gtccggacaa ccggacgatg tatttctcgg acacggccac gcacacaatc tttgcctacg
     5161 actacgacct cgacgccggg caaatccgca acaagcgggc gttcgcgacg ttcgagcgcg
     5221 gcgatcccga cggctcgacg gtcgatgccg acgggtgcct gtggaacgcc cgctgggacg
     5281 gcagctgcgt ggtgcgcttc acgccgcagg gcaaggtcga cacggtgatc gaggtgccgg
     5341 tcgccaagcc gacgagctgc gccttcggcg gccccgacct ggcggacctc tacatcacca
     5401 ccgcccgcta tggcggcacg cctgaagcgc tggcggcgac gccgctcgcg ggcgacctgc
     5461 tggtctgccg gccgggcgcg acaggcctgc cacaacccga gttcggctag gcgccggcgg
     5521 ccagcagctg gcggcgggcc agcgcggcgg tcagcaccgg cccctgcccc cacggcacga
     5581 tcaggccgcg cgggacgtgc cagtaatgct cctgcaccag cgccgcatag accgccgcgg
     5641 agacgccctg caggttgccg tcggcatcga ggttggccga cattgcggcg aaggcgcggt
     5701 cggccggctc gcggaagctg tcggcgggca gcacgcccag ccggatgccg cgatagaacg
     5761 cgcaggccat gaacgcggcg gtcgaggatt ccggcccgga ctgcggttcg tgcaccatgg
     5821 cccaccaatt gccgtcggcg agctgccagc gccgcatggc gtcggcgagg tcgcgggtgc
     5881 gggtgacgac ttcggcatgg cgcggcgtcg ccgggtcggc atgggcgacg acgtcgagca
     5941 ggccgagcag ggcccagccc tggccgcggc cccagccgcg gatataggcg cgaccggtgc
     6001 gctcgagcca gtaatgctgg tacaggccga gttcgggatc gatgagcagg tcgcaatagg
     6061 cgaggatctc gtcgacggcg cgcccggccc attgcgggcc accgccaatg gcgccgagat
     6121 gggcgtagaa cggcggatcg aaatgcatgc agtcgagcca cacgccggcg cccgggttct
     6181 gcatcagctc ctgctcggcg gggctcagcg gcacgccgcc atagggctga cgcagggcgc
     6241 gcagcgtatc ctcgaacgtt attccaatac cgcggacgcg gcggcggcca tagagatgtt
     6301 cggccagccg cagcacggcg ccccgcagca cctcgtcgcc ggtgcgccgc accatctcgc
     6361 acatcacgtg gccgggggcg gtgttgtcgt cgggctggaa cggctccatg cgcgtcgccc
     6421 aggcgcggaa gaagccgcgc gagaaatcct gccaggtcgc gacccccagc atgtcgccgg
     6481 cggcgacgag gccctcgaag cccaccgaat cgccgtagaa ccagcccttg aattcgtgct
     6541 gctcgagctg gtgcgcgacg cgcgccagca ggccgagatc gtctccccgc agttccgtca
     6601 tgtcgtcctc tattcagaaa gagcgaagcc gacccgggca tccgccatgg cgccctggat
     6661 cagccggcgc atggcgcgct cggcgccatc cgggtcgtcg gcggcaaagg cgtcgtagac
     6721 gtcctggtgc agccggttgg tgtcttccat gccgaccagc gaggttttcg agccgcgcgc
     6781 ctgcatctgc acgtcgatca tcagcgtcag cgccgcctcg atcaccgaga acaactgctc
     6841 gagcagctcg gactgcaccg tggcaaggaa ggcgcggtgg aactcgaggt cgtgcgagat
     6901 gaaatgggcc cgctggtcgc cgggcgtcga ggtctcggag aacaccgcca gccagccctg
     6961 ccaggccgcg tggatgcgcg ccttggccgc cggcgagccg aaggcggtgg cgttccacac
     7021 cacgccgggc tcgagcacga ggcgcacctg cagcaggtcg cgcagcagcg cgttgcggtc
     7081 ggccgcctgc atgcgccact ggatcaggtc cgggtcgagc agccgccacg aggcgcgcgg
     7141 caggacggtc gtgccctcca tctgccggct gcgcaccagg cccttggcat tgaggatgcg
     7201 gatcgcctcg cgcaccaccg agcggccgac gccgagctcc gccatcagcg cggcctcggt
     7261 gggcagcgcg gcgccgtgcg cccactcgcc cgacaccacg cgacggccaa ggccgccgac
     7321 gatttcgccg agcacgccgc gcaccggcat caggccgccg attgccttgg aacgtgccgg
     7381 cgcattatct ggcttcatcg gcccccctgt ttatcagctt atcttacaat ctcggaccgg
     7441 cggcaatatc gttccgccgc ggagtgcggg ggccggtcaa caatagcgag cacgttcagc
     7501 gccggctggc cagaaattcc aggaccatcg cggcggtcca ggtgaagcgg ccgccgccgc
     7561 agggctcgcc ggtcagcggg tcgtagtatt cggcgaagcc ggaacgggtg atgagatcga
     7621 ggctgtcggc gacgatgcgg tcggcgatcg ccgtctcgcc ggccaaccgc aggccgtcgg
     7681 cgatcatgta gttcatcacc agcca
//
LOCUS       DATAZA010000144         1502 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3496979, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000144 DATAZA010000000
VERSION     DATAZA010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3496979"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /locus_tag="VHZ56_03725"
     CDS             <1..414
                     /locus_tag="VHZ56_03725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297107.1"
                     /translation="LASYYQAYRPWFDRINRRIGYRVRPSFIWSYEDDGYVGLIVGFA
                     NDGIGGVPGALRVTVESQEGQTLQSGCLDAGYPVPGKIRQAQFVLPKGTKWQGMKLRA
                     EIEVKGMRYPVRWACSQSLNADGSLTLRPNLQREI"
     gene            complement(476..1144)
                     /locus_tag="VHZ56_03730"
     CDS             complement(476..1144)
                     /locus_tag="VHZ56_03730"
                     /inference="COORDINATES: protein motif:HMM:NF025380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HEX4297108.1"
                     /translation="MPSTIIEKSSPVQKRSAAFPALILGIVLGLLVALVAVPAAVRHV
                     GASMRNRISLAFLGRHDAIDISQPTVIASIQRLARLESVVYTMDKVVEGDRTSQYLPD
                     ILTGDKLLMIVHGQAVAGVDLSQVQASNVLIDGRSVILTMPPAQLLSVSLDNSKTRVY
                     SRITGLLVPADPNLESEVREKAEADLRQSALDSGILTTAEGNARATLTTMLRSFGFQQ
                     ITFR"
     gene            complement(1254..>1502)
                     /locus_tag="VHZ56_03735"
     CDS             complement(1254..>1502)
                     /locus_tag="VHZ56_03735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297109.1"
                     /translation="ASFVALAWLLVTGAFQYFRMRPHFAGYPAWSPQVRRWEVDEHQP
                     IIIAPDFWNPLYLPHRHPNLADLPANADAPASGHQIRD"
BASE COUNT          289 a          378 c          560 g          275 t
ORIGIN      
        1 ctcgcgagtt attaccaggc gtaccggcca tggttcgacc ggatcaatcg gcgtattgga
       61 taccgggtca gaccgtcctt tatctggagc tatgaggacg acggctatgt tgggctgatt
      121 gtcggtttcg cgaacgatgg cattggcggt gttcccggtg cactgcgggt cacggtagag
      181 agccaggagg gacaaacgct ccagagcggt tgtctggacg cgggttaccc ggtgccggga
      241 aagatccggc aggcacagtt tgtcctgccc aagggaacaa aatggcaggg aatgaagctg
      301 agggcggaga tcgaagtgaa aggcatgcgc tatccggtgc gatgggcgtg tagccaatcg
      361 ctcaatgccg acggctcgct cacgctgcgt cccaacctgc agcgagaaat ctagagcatg
      421 acccgagagg acatgactgc gagtactgcg agtgcgacgt cagcgagacg ttggcttagc
      481 ggaaggtgat ctgctggaat ccgaaggaac gcagcatggt ggtgagggtg gcgcgggcgt
      541 tgccttcggc ggtggtgagg atgccgctgt cgagcgcgga ttggcgcaga tcggcttcgg
      601 ctttttcgcg cacctcggat tcgaggttgg gatcggcagg cacgagcagg ccggtgatgc
      661 gggagtagac gcgcgtcttg gagttgtcga gcgagacgga gagcaactgg gcggggggca
      721 tggtgaggat gacgctgcgc ccatcgatta gcacgttgct ggcctgcacc tggctgagat
      781 cgacgccggc gacggcctgg ccgtgaacga tcatcagtag cttgtcgccg gtgaggatgt
      841 cgggcaggta ctggctggtg cggtcccctt cgacaacttt gtccatggtg tagacaacgg
      901 attcgagccg cgcgagacgc tggatactgg cgatgacggt gggctgcgag atatcgatgg
      961 catcgtggcg gccgaggaag gccaggctga tgcggttgcg catggaggct ccgacatggc
     1021 gcacggcggc gggaacggcg acgagcgcga caagcaggcc gaggacgatg ccaaggatga
     1081 gcgcgggaaa cgcagcggag cgcttctgga cgggggacga cttctcgatg atcgtagagg
     1141 gcatatcagt tctctcacta tgtgacgcgc gcggaggcta gagggctggt cacctgctgc
     1201 acgattcttc cgatctactt ggcgtggcca gctttgcgcc tgacgcgaat actttaatcc
     1261 cggatctggt gaccgctcgc gggggcgtcg gcattcgcgg gcaggtcggc gaggttggga
     1321 tgccgatgcg ggaggtatag agggttccag aaatccggcg cgatgatgat gggctgatgc
     1381 tcgtcgacct cccagcggcg cacctgtggc gaccatgccg gataaccggc gaagtgagga
     1441 cgcatgcgga agtattggaa ggctccggtg accaggagcc acgcgagggc gacgaagctc
     1501 gc
//
LOCUS       DATAZA010000145         3651 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3612226, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000145 DATAZA010000000
VERSION     DATAZA010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3651
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3612226"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1154)
                     /locus_tag="VHZ56_03740"
     CDS             complement(<1..1154)
                     /locus_tag="VHZ56_03740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HEX4297110.1"
                     /translation="MPFEPAHQADVRSLMGRDLRRNAQKAVFDARQRLTSSSGTRASF
                     DFELIDEYADSRNSSALVLPIVFVILAVFSSLWVPPFEAASWAGIVTSANLAVVFACR
                     RFKRTPPEKFNAGRWTATFITVETIYGIAWSLLALFSLGGRDPQSLAVVMFAIALVGV
                     ATNAVSTRTLPGATVMSTLPVVLTVSIDLVFIGGPGNTLNWSLAAVTIGAEIFFVYLA
                     RQLHASKLEEIMHQAEKDQLINELEEAREMSDEARRHAEQANIAKSQFLATMSHELRT
                     PLNAIIGFSEVLESELLGPHQVPQYKEYAGDIHRSGQHLLNLINELLDLSRIEAGKYE
                     LNEEATSLTDIAEDCRRMVEIRAKAKSIELNFTYASNLPKLWGDERAIRQV"
     gene            1277..1813
                     /locus_tag="VHZ56_03745"
     CDS             1277..1813
                     /locus_tag="VHZ56_03745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEX4297111.1"
                     /translation="MPISQPLALAAILVAIALVAIVATLVQQAGPPLLGRAEVVDGDT
                     LRMGGVRIRLLGLDAPELAQTCTDGNGADWPCGTKAKAFVETLVRGADLDCRPGGRDR
                     YGRTLARCSTAGGDLGHAIVAAGWAISLPAYASEEAAARAAGQGIWAGTFVAPADWRR
                     SHGEGVPGPWDWIRSWFH"
     gene            1975..2454
                     /locus_tag="VHZ56_03750"
     CDS             1975..2454
                     /locus_tag="VHZ56_03750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEX4297112.1"
                     /translation="MDKIDRKILALLQKDATTPVAEIGRKVGLSTTPCWRRIQKMEED
                     GVIKGRVAILDPSRINAGVTVFVSIRTNEHNEPWMRKFAAVVDDFTEVVEFYRMSGDV
                     DYLLRVVVPDIAAYDAFYKKLISKIALTDVSSSFAMGQIKYTTALPLEFVSVTDDDK"
     gene            2467..3141
                     /locus_tag="VHZ56_03755"
     CDS             2467..3141
                     /locus_tag="VHZ56_03755"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX4297113.1"
                     /translation="MPEIVQRSDFASPLVRGVSRTVFDAPAELPMHPDGCWDIAILRR
                     GDDVQVLRTGLTTRTVTYRAAAGDEILAISFGPDSFMSLLPGEQMRDEGVMLETIGRD
                     RFWIGSDVVEIPTLDNVDGFVASLLRRGIVESNEVVTAIVDGRPRAMSERTMQRHFLR
                     TTGLTYKSFTQIERARKAMALLQMGRPAADVAFALGYADQPHLIRSLKAIMGRTPARI
                     ADASAG"
     gene            3246..>3651
                     /locus_tag="VHZ56_03760"
     CDS             3246..>3651
                     /locus_tag="VHZ56_03760"
                     /inference="COORDINATES: protein motif:HMM:NF018180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxide hydrolase N-terminal domain-containing
                     protein"
                     /protein_id="HEX4297114.1"
                     /translation="MSTITPFTIAIPDAQLADLKARLAATILPTTGGETGWAQGPALS
                     YVERVLAYLAEGFDWRTAEAGINRHPQFITTIDGQPIHFLQVKSPEPSATPLLLIHGW
                     PGSIVEFLDVIGPLTDPVAHGGKASDAFDLVIP"
BASE COUNT          613 a         1258 c         1183 g          597 t
ORIGIN      
        1 acctgccgga tggcgcgctc gtcgccccat agcttgggca gattgctggc gtaggtgaag
       61 ttcagctcga tgctcttggc cttggcgcgg atctcgacca tgcgccggca atcctcggcg
      121 atgtcggtga gcgacgtcgc ctcctcgttg agctcgtatt tgccggcctc gatgcggctg
      181 aggtcgagca gctcgttgat gaggttgagc aggtgctggc cggagcggtg gatgtcgccg
      241 gcatactcct tgtactgcgg cacctggtgc ggccccagca gctcggattc gagcacttcc
      301 gaaaacccga tgatggcgtt gagcggcgtg cgcagctcgt ggctcatcgt cgcgaggaac
      361 tgcgacttgg cgatgttggc ctgctcggcg tgccggcgcg cctcgtcgct catctcgcgc
      421 gcttcctcca gctcgttgat cagctggtcc ttctcggcct ggtgcatgat ctcctcgagc
      481 ttggaggcgt gcaactgccg ggcgaggtag acgaagaaga tctcggcgcc gatcgtcacc
      541 gccgccagcg accagttgag cgtgttgccc ggcccgccga tgaacaccag gtcgatcgac
      601 accgtcagca ccaccggcag cgtcgacatc accgtggcgc cgggcagggt acgcgtcgac
      661 accgcgttgg tcgcgacgcc caccagcgcg atggcgaaca tcaccaccgc caggctctgc
      721 ggatcgcggc cgccgagcga gaacagcgcc agcagcgacc aggcgatgcc gtagatcgtc
      781 tcgaccgtga tgaacgtcgc cgtccaccgg ccggcgttga atttctcggg cggtgtgcgc
      841 ttgaagcggc ggcaggcgaa caccaccgcc aaattggccg aggtgacgat cccggcccag
      901 ctggcggcct cgaacggcgg cacccacagg ctcgaaaaca ccgccaggat gacgaacacg
      961 atcggcagca ccagcgcgct ggagttgcgc gagtcggcgt actcgtcgat gagctcgaaa
     1021 tcgaagctgg cgcgggtccc cgacgacgag gtcagccgct ggcgggcgtc gaatacggcc
     1081 ttttgcgcgt tgcggcgcag atcgcgcccc atgagggagc ggacatcggc ctgatgcgcc
     1141 ggctcgaacg gcataacgcg ggtactcgac tgactagggc tgcgaaaggg ttacgcattc
     1201 gctacgctgc gcccaaaccc tatgccgatc gtggttaagg gggagtgaaa tgcggacgtc
     1261 gccgtggcgc agaaacgtgc cgatttcgca gccgctggcg cttgccgcga tcctcgtcgc
     1321 cattgccctg gtggcgatcg tcgccacgct ggtgcagcag gccggcccgc cgctgctcgg
     1381 ccgcgccgag gtcgtcgacg gcgacaccct gcgcatgggc ggggtgcgca tccgcctcct
     1441 cgggctcgac gctcccgagc ttgcccagac ctgcaccgac ggcaatggcg ccgactggcc
     1501 atgcggtacg aaggcgaaag cgttcgtcga aaccctggtg cgcggcgccg acctcgattg
     1561 ccgtccaggc gggcgcgacc gctacggccg gacgctggcc cggtgcagca ccgccggcgg
     1621 cgatctcggc cacgccatcg tcgccgccgg ctgggccatc agcctgcccg cctacgccag
     1681 cgaggaggct gccgcgcgcg ccgccgggca gggcatctgg gccggtacct tcgtcgcccc
     1741 cgccgactgg cggcgcagcc acggcgaggg cgtccccggc ccctgggact ggatcagaag
     1801 ctggttccac tgagcagctg cgctacaccc ttttggataa ggtcagcgac attgacttcg
     1861 ggtacaaagt tgcgttgagt gcgcgaaagc ggtggcacga ttgcgtggtt tggagcaatt
     1921 accgcccgtt tccgcaaact gatttcacgc tgacgtttcg aggggctcat ggcactggac
     1981 aagatcgacc gcaagattct cgcgctgctg caaaaggatg caacgacgcc ggtggccgaa
     2041 atcggccgca aggtcggcct gtccaccacc ccctgctggc gccgcatcca gaagatggag
     2101 gaagacggcg tcatcaaggg tcgcgtcgcc atcctcgatc cgagccggat caacgccggc
     2161 gtcacggtgt tcgtctcgat caggaccaac gagcacaatg aaccctggat gcggaaattt
     2221 gccgccgtcg tcgacgactt caccgaggtc gtcgagttct accgcatgag cggcgacgtc
     2281 gattacctgc tgcgcgtcgt cgtgccggac atcgccgcct acgatgcctt ctacaagaag
     2341 ctcatttcca agatcgcgct caccgatgtg agctcgtcct tcgccatggg ccagatcaag
     2401 tacaccacgg ccctgccgct cgaattcgtc agcgtcaccg acgacgacaa gtagcggcgg
     2461 cagccggtgc ccgagatcgt ccagcgcagc gattttgcct cgccgctggt gcgcggcgtc
     2521 agccgcacgg tgttcgacgc gccggcggag ctgccgatgc accccgacgg ctgctgggat
     2581 atcgccatcc tcaggcgcgg cgacgatgtg caggtgctgc gcaccggcct caccacgcgg
     2641 accgtcacct atcgcgccgc agcgggcgac gagatcctcg ccatcagctt cggcccggac
     2701 agcttcatgt cgctgctgcc cggcgagcag atgcgcgacg aaggggtgat gctggagacg
     2761 atcggccgcg accggttctg gatcggcagc gatgtcgtcg aaatccccac cctcgacaac
     2821 gtcgacggat tcgtcgcgag cctgctccgg cgcggcatcg tcgagagcaa cgaagtcgtc
     2881 accgccatcg tcgacggccg gcccagggcg atgtcggagc gcaccatgca gcgccatttc
     2941 ctgcgcacca cgggcctgac ctacaagagc ttcacgcaga tcgagcgggc ccgcaaggca
     3001 atggcgctgc tgcagatggg ccgtcccgct gccgatgtgg cgttcgccct gggctatgcc
     3061 gaccagccgc atctgatccg ctcgctgaag gccatcatgg gccgcacgcc ggcccgcatc
     3121 gcggacgcct ccgccggctg attgtcggat ttcttcaatc tccaaaggac ccggctgact
     3181 acaaccggac ggtcagcccc cggggcgctg cggcgcgcct caagtccctc acggagaaca
     3241 gaaaaatgtc gacgatcacg cccttcacca tcgccatccc ggacgcccaa ctggccgacc
     3301 tcaaggcccg gctcgccgcc accatcctgc ccaccaccgg cggcgaaacc ggctgggccc
     3361 agggtccggc gctgagctac gtcgagcgcg tactggccta tctcgccgag ggcttcgact
     3421 ggcgcaccgc ggaagcgggg atcaaccgcc atccgcagtt catcaccacc atcgacggcc
     3481 agcccatcca tttcctgcaa gtcaaatcgc ccgagccgtc ggcgacgccg ctgctgctga
     3541 tccacggctg gccgggctcg atcgtcgagt tcctcgacgt catcggcccg ctgaccgatc
     3601 cggtcgccca tggcggcaag gcatcggacg cgttcgacct ggtgatcccg t
//
LOCUS       DATAZA010000146         2101 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_827627, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000146 DATAZA010000000
VERSION     DATAZA010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_827627"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1184
                     /gene="uxuA"
                     /locus_tag="VHZ56_03765"
     CDS             <1..1184
                     /gene="uxuA"
                     /locus_tag="VHZ56_03765"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011649592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008927 - mannonate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006064 - glucuronate catabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HEX4297115.1"
                     /translation="QGWRWFGPESGVSLDEVRQAGATDVVTALHEVPIGAAWTEAAIA
                     GRKNLIETTPPGRVPLRWSVIESIPVPDAVKRHGGAAKAEIAAWVASMEAAARAGIGV
                     ICYNFMPVVDWCRTELDYETSSGATAMRFDQEKFAAFDLHILERPGAEADYTAEERGA
                     ARATYAAMDEAERQSLVTNIASALPGSTTEPLTIPGFRDRLADYRGIDAARLRQHLVE
                     FLAAVTPAAEQLGVTLTLHPDDPPRPLFGLPRIASTAADYMALFEAVPSPANAMCLCT
                     GSLGVRADNDLVAIARHFAPRIGFAHLRATKREADPRSFHETAHLEGDVDMVGVLRVL
                     LAEDARRAPGRGIVFRPDHGQKMIGDFGRRVAPGYPVTGRLRGLAELRGIIAALEATG
                     D"
     gene            1279..2007
                     /locus_tag="VHZ56_03770"
     CDS             1279..2007
                     /locus_tag="VHZ56_03770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 16 protein"
                     /protein_id="HEX4297116.1"
                     /translation="MHWRQMALAIALTTLALPAQAATLQFAGYSWDVRDYGGLPGPNS
                     WDGDNVFVDAAGLHLRIVKSGDTWNASEVVMTAPLGFGTYRFEIAGRPDRLDRNVVLG
                     LFNFPASDAVVPAGTNEIDVEVSQWGDAGDPNRLNWTVQPSVPGLKSTHKGLPLRLKS
                     DRSTYRFTWSATGVTYDWFPGYPDAAARPAATWIDAPAEPAKHIPQSPLVVHMNLWLI
                     GGKPPHDGKPVEIVITSFSFTPAP"
BASE COUNT          312 a          717 c          762 g          310 t
ORIGIN      
        1 ggcagggctg gcggtggttc ggaccggagt ccggcgtgag cctcgacgag gtgcggcagg
       61 cgggcgcgac cgacgtggtc acggcgctgc acgaggtgcc gatcggggcg gcgtggaccg
      121 aggcggcgat cgccgggcgc aagaatctga tcgagacgac gccgcccggc cgggtgccgc
      181 tgcgctggtc ggtgatcgag tcgatcccgg tgcccgacgc ggtcaagcgc catggtggag
      241 cggcgaaagc cgagatcgcg gcctgggtcg ccagcatgga ggcggcggcg cgggcgggga
      301 tcggcgtcat ctgctacaat ttcatgccgg tggtcgactg gtgccgcacc gagctcgact
      361 acgagacgtc cagcggcgcg acggcgatgc gcttcgacca ggagaaattc gcggcgttcg
      421 acctccacat cctcgagcgg ccgggggccg aggcggacta tacggcagag gagcgcggcg
      481 cggcgcgcgc cacctacgcg gcaatggatg aggccgaacg gcagagcctc gtcaccaaca
      541 tcgcctcggc gctgccgggc tcgaccaccg agccactgac catccccggc ttccgcgaca
      601 ggctcgcgga ctatcgcggc atcgatgcgg cgcggctgcg gcagcacctc gtggaattcc
      661 tcgcggcggt gacgccggcc gccgaacagc tcggcgttac gctgacgctc caccccgacg
      721 atccgccgcg gccgctgttc gggctgccgc gcatcgcctc gacggcggcg gactatatgg
      781 cgctgttcga ggccgtgccc tcgccggcca acgcgatgtg cctctgcacc ggcagcctcg
      841 gggtgcgggc cgacaacgac ctcgtcgcca tcgcccgcca cttcgcgccg cggatcggct
      901 ttgcgcatct gcgcgccacg aagcgcgagg ccgatccgcg cagcttccac gagaccgcgc
      961 acctcgaggg cgatgtcgac atggtcggcg tgctgcgggt gctgctggcg gaggatgcgc
     1021 ggcgcgcacc gggccgcggc atcgtgttcc ggcccgacca cgggcagaaa atgatcggcg
     1081 atttcggccg ccgggtggcc ccgggttacc cggtgaccgg ccggctgcgc ggactggcgg
     1141 aactgcgcgg catcattgcg gcgctcgagg cgaccggcga ttgagcggcg cgcgctaacc
     1201 tcgttgccgg cgcggggttg acgcgcgccg cgcggcccct acacccaacg gccaggcaag
     1261 cgggaacgga tgacgggcat gcactggcga cagatggcgc ttgcgatcgc gctgacgacg
     1321 ctcgccctgc cggcgcaggc ggcgacgctg cagttcgccg gctacagctg ggacgtccgc
     1381 gattatggcg gcctgccggg tccgaacagc tgggacggcg acaatgtgtt cgtcgacgcg
     1441 gccgggctgc acctgcggat cgtcaagagc ggcgatacct ggaatgcgtc cgaagtggtg
     1501 atgacggcgc cgctggggtt cggcacctac cggttcgaga tcgccgggcg accggaccgg
     1561 ctcgaccgca acgtggtgct cggcctgttc aattttccgg cgtcggatgc ggtcgtcccc
     1621 gccgggacca acgagatcga tgtcgaggtc tcgcaatggg gcgatgcggg cgatcccaac
     1681 cggctcaact ggacggtgca gccatcggtg cccgggctca aatcgacgca caagggcctg
     1741 ccgctgcggc tcaaatccga ccgctcgacc tatcgtttca cgtggagcgc cacgggcgtg
     1801 acgtatgact ggtttccggg ctatccggat gcagccgcca ggccggcggc tacgtggatc
     1861 gacgcgccgg ccgaaccggc gaagcacatt ccgcaatcgc cgctggtggt gcatatgaat
     1921 ctgtggctga tcggcggcaa gccaccgcac gacggcaagc cggtggagat cgtcatcacg
     1981 tccttcagct tcacgccggc gccatgacgg ctccctccgc gccggcgcgg cctcacggca
     2041 tttttcctat cctctatgcc ttcttcgacg ccgaatgcgg gctcgaccgc gccgcgttcc
     2101 g
//
LOCUS       DATAZA010000147         4009 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_15600, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000147 DATAZA010000000
VERSION     DATAZA010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4009
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15600"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            90..1409
                     /locus_tag="VHZ56_03775"
     CDS             90..1409
                     /locus_tag="VHZ56_03775"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEX4297117.1"
                     /translation="MTVVRYAPSPTGRLHLGNARPALLNWLFALRTGGDYILRYDDTD
                     TARSTAEFARFIDDDLAWLGIAPTRRVRQSDRLPLYDAARDRLIAAGRLYPAYETEEE
                     LEIRRGRARLLGRPPIYDRAALALTDAQRRALEAEGRRPHWRFRLDGRAVHFDDLVKG
                     PQTVNTASMSDPVLVRGDGSYLYTLTSVVDDIDLAVTHVIRGEDHVSNTGTQIEIFEA
                     LGGAVPAFAHHNLLTGAEGEGLSKRLGSLSLAELRADGFEALAVALVATLTGTSLPVE
                     PYPDLATLAGRLDFSMISHGPARFDPAELEGLNARILHAMPYDQARPRLPASIGGAAW
                     SILRANLQKLSDIEPWAAVLEGQLQHPSDPADRNFLDEAGELLPPEPWDETTWSAWTN
                     ALKAKSGRKGRALFHPLRLALTGREDGPELRSLLPLLGRKACLDRLS"
     gene            complement(1354..2487)
                     /locus_tag="VHZ56_03780"
     CDS             complement(1354..2487)
                     /locus_tag="VHZ56_03780"
                     /inference="COORDINATES: protein motif:HMM:NF022515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2865 domain-containing protein"
                     /protein_id="HEX4297118.1"
                     /translation="MPQASTFWARCIALCCAVALFALSAGDASAQSQNCQALGNTLRQ
                     LESSDAYQGSGDINDRLRDAQDGVQQAESQYVRDGCNAAAKAGQPLNAQCRGEARQVL
                     QARANLKQVSAAADTGNQVDQQREAVLQDMARFNCDSRSNATVTQSPQRGNLFDQLFG
                     QFEQNDDGNTTRGDQFQGQAGEETIRTVCVRKSDGYYWPVSFSTLLEYAPQDADVCQA
                     QCPNTDVELYYYDNPGQDPDQMVNLQGQPYKSLPNAFAYRTKYDADNDCKAKVDYGTI
                     NLAALPDGTQRAMVSFDGQIFPLPVDDPRQTAEVTMAPVAAANYVDVPLPRPRPPGPG
                     EAPKPVVVKQAATDPERIVMFGDKRVRIVGPDTPYAPTEAAGT"
     gene            2736..3167
                     /locus_tag="VHZ56_03785"
     CDS             2736..3167
                     /locus_tag="VHZ56_03785"
                     /inference="COORDINATES: protein motif:HMM:NF013487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX4297119.1"
                     /translation="MSVAVLADTPPTFTADPAIAAMSADQKVDARQKAMKEDGETLKD
                     NFKATGQAAVTAVNTVEQNFTNFPALFADGATNDKSKALPIIWTEYDKFTALFDKGKT
                     DLEAMRTAALAGDAAGYNKAIRALSAVCSECHKTYRASNDG"
     gene            3411..>4009
                     /locus_tag="VHZ56_03790"
     CDS             3411..>4009
                     /locus_tag="VHZ56_03790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEX4297120.1"
                     /translation="MASDLTLKLTNTLTRTKEDFVPADPLNVGMYVCGPTVYDFAHIG
                     NARPAIVFDVLFRLLRHVYGADHVTYVRNITDVDDKINARAVRDFPGLPLNEAIRRVT
                     ETTAAQYQKDVTALGCLDPTVQPRATDNIDGMQKLIGELLANRHAYVAASVGEVLFDV
                     GSMPDYGALSGRDLDSNLAGARVEVDTHKRNPADFVLWK"
BASE COUNT          627 a         1473 c         1239 g          670 t
ORIGIN      
        1 atcggtcgca aataccccat caccaacggc taccgcgaca acagcgagat cgtcgcccgc
       61 gagccggccc cgatgcggca gggcgtcgag tgaccgtcgt ccgctacgcg ccgtcgccga
      121 ccggccgcct gcacctgggc aacgcccgcc cggcgctcct caactggctg ttcgcgctgc
      181 gcaccggcgg cgactacatc ctgcgctacg acgacaccga caccgcgcgt tccaccgccg
      241 aattcgcgcg cttcatcgac gatgacctcg cctggctcgg cattgcgccg acgcgccgcg
      301 tccgccagtc cgatagactc ccgctctacg acgcggcgcg tgaccggctg atcgccgccg
      361 gccgcctcta tcccgcctac gagaccgagg aagagctcga gatccgccgc ggccgcgccc
      421 gcctgctcgg ccgcccgccg atctatgatc gggcggcgct ggcgctcacc gacgcccagc
      481 gccgcgccct cgaggccgaa ggacgccggc cgcactggcg cttccggctc gatggccgcg
      541 ccgtccactt cgacgatctg gtcaagggtc cgcagaccgt caacaccgcc tcgatgtccg
      601 acccggtgct ggtccgcggc gacggctcct acctctacac cctgacctcg gtcgtcgacg
      661 acatcgacct tgccgtcacc cacgtgatcc gcggcgagga ccacgtcagc aacaccggca
      721 cgcagatcga aatcttcgag gcgctcggcg gtgccgttcc ggcctttgcc catcacaatc
      781 tgctgaccgg cgcagaaggg gaggggctga gcaagcggct cggttcgctg tcgctggccg
      841 agctgcgcgc cgacggcttc gaggcattgg ccgtcgcgct cgtcgccacg ctgaccggta
      901 ccagcctgcc ggtcgagccc tatcccgacc ttgcgacgct tgccggccgc ctcgatttct
      961 cgatgatctc gcacggcccg gcgcggttcg atccggccga gctcgaaggc ctcaacgccc
     1021 gtatcctgca tgccatgcct tacgaccagg cgcggccgcg gctgccggcc tcgatcggcg
     1081 gcgcggcgtg gtcgatcctg cgggccaatt tgcagaagct ctccgacatc gagccctggg
     1141 ccgcggtgct cgaaggccag ctgcagcatc cgtccgatcc cgccgaccgc aatttcctcg
     1201 acgaggccgg cgagctcctg ccgcccgagc cgtgggacga aaccacctgg tcggcatgga
     1261 ccaatgcgct gaaggcaaaa tccggccgca agggcagggc gctgttccat cccctgcggc
     1321 tggccctcac cggccgcgag gacggacccg agctcaggtc cctgctgcct ctgttggggc
     1381 gtaaggcgtg tctggaccga ctatcctgac gcgcttgtcg ccgaacatga cgatgcgctc
     1441 cgggtcggtt gccgcctgct tcaccaccac cggcttcggc gcttcgcccg gacccggcgg
     1501 ccgcggccgc ggcagcggga catcgacgta gttggcggcg gcgaccggcg ccatcgtgac
     1561 ctccgcagtc tgccgcggat cgtcgaccgg cagcgggaag atctggccgt cgaagctcac
     1621 catcgcccgc tgcgtgccgt cgggcagggc ggcgagattg atggtgccgt aatcgacctt
     1681 ggccttgcag tcattgtcgg cgtcgtactt ggtccggtag gcgaaggcgt tgggcagtga
     1741 cttgtagggc tggccctgca ggttgaccat ctggtcgggg tcctgcccgg gattgtcgta
     1801 gtagtagagc tcgacgtcgg tgttcggaca ctgcgcctgg cacacatcgg catcctgcgg
     1861 cgcgtactcc agcagcgtcg aaaagctcac cggccagtag tagccgtcgc tcttgcgcac
     1921 gcagaccgtg cggatggttt cctcgccggc ctggccctgg aactggtcgc cccgcgtggt
     1981 attgccgtcg tcgttctgct cgaactggcc gaacagctgg tcgaacagat tgccgcgctg
     2041 cgggctctgg gtgacggtgg cgttcgagcg gctgtcgcag ttgaagcgcg ccatgtcctg
     2101 cagcaccgcc tcgcgctgct ggtcgacctg gttgccggtg tcggcggccg ccgacacctg
     2161 cttgaggttg gcgcgcgcct gcagcacctg ccgcgcctcg ccccggcatt gcgcattgag
     2221 cggctgtccg gccttggccg ccgcgttgca gccgtcgcgc acgtactggc tctcggcctg
     2281 ctgcaccccg tcctgcgcgt cgcgcagccg gtcattgatg tcgcccgagc cctggtaggc
     2341 gtcgctgctc tcgagctggc gcagcgtgtt gccgagcgcc tggcaattct gcgactgcgc
     2401 cgacgcatcg ccggccgaga gcgcgaacag cgccaccgcg cagcagagcg cgatgcagcg
     2461 tgcccaaaat gtcgaggcct gaggcatgga atccaaacgt acgagccgac cgcaaatcgg
     2521 ccatagccga gcaattagcc caaaatccgg cgattccgaa gccctcaatc cgatcgtccc
     2581 gcgtcgcggt caggtgaaga ttgtgaaggc ccccagtgga ataggcacgc ttgtcaggcg
     2641 ttgctgttcc tgcgagcctt ccccatcgac accggagccc atcgatgcgc gtttcccgcc
     2701 ttgtgcttgt cccgaccgcg gcaatcgccg ccttgatgtc cgtcgctgtg cttgccgaca
     2761 cgccgccgac cttcacggcc gatcccgcca tcgctgccat gagcgccgac cagaaggtcg
     2821 atgcccgtca aaaggcgatg aaggaggacg gcgagacgct gaaggacaat ttcaaggcga
     2881 ccggccaggc cgccgtcact gcggtgaaca ccgtcgagca gaacttcacc aatttcccgg
     2941 cgctcttcgc cgatggcgcc accaacgaca agtccaaggc gctgcccatc atctggaccg
     3001 agtacgacaa gttcaccgcg ctgttcgaca agggcaagac cgacctcgag gccatgcgca
     3061 ccgcggcgct ggccggcgac gccgccggct acaacaaggc catccgcgcg ctcagcgccg
     3121 tctgctccga gtgccacaag acctaccgcg cctccaacga cggttgaccc gccggccggc
     3181 catcggcctg tcccgcagca tctcgttcat cttccggcac gcgccccctt gcttttggcg
     3241 gcgttcatcg tcagattgcg cgccatgaaa accgcccccg caatctgcat tatcggctcg
     3301 attatttgct gctgacacct gttggcggcg cggttttctt catcctcagt ctcaacttcc
     3361 cgaagagccc gctgccagcg cgtcaccccg cttgaggcat ggaccgcccg atggcttcgg
     3421 acctgacatt gaagctcacc aacacgctga cccggaccaa ggaggacttc gtccccgccg
     3481 atccgctgaa cgtcggcatg tatgtgtgcg ggccgacggt ctatgacttc gcccacatcg
     3541 gcaacgcccg cccggccatc gtcttcgacg tgctgttccg gctgctgcgc catgtgtatg
     3601 gcgccgacca tgtcacctat gtccgcaaca tcaccgacgt cgacgacaag atcaacgccc
     3661 gcgccgtgcg cgattttccc ggcctgccgc tgaacgaagc catccgccgc gtcaccgaga
     3721 ccaccgccgc gcagtaccag aaggacgtga cggcgctcgg ctgcctcgat ccgaccgtcc
     3781 agccgcgcgc caccgacaat atcgacggca tgcagaagct catcggcgag ctgctggcca
     3841 accgccacgc ctatgtcgcg gcttcggtcg gcgaagtgct gttcgacgtc ggctcgatgc
     3901 ccgactacgg cgcgctctcc ggccgcgacc tcgacagcaa cctcgccggc gcccgcgtcg
     3961 aggtcgacac ccacaagcgc aaccccgccg atttcgtgct ctggaagag
//
LOCUS       DATAZA010000148         4897 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1988525, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000148 DATAZA010000000
VERSION     DATAZA010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4897
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1988525"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..590)
                     /locus_tag="VHZ56_03795"
     CDS             complement(<1..590)
                     /locus_tag="VHZ56_03795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019173602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEX4297121.1"
                     /translation="MQVLDTTIANVALPHMAASLGAAQNEITWVLTSYIVAAAIATPL
                     TGWMSDRIGQKRLFIISVIGFTFASALCGIATSLDEMVLFRVLQGICGAMIAPLAQTV
                     LLNINPKERIGQAMAIYGMGIMVAPIIGPTLGGYLTETFDWRWVFLINLPVGIATVAM
                     LMLYMPDTAIKRRRFDFFGFGMLALGVGALQLLLDRG"
     gene            complement(747..1907)
                     /locus_tag="VHZ56_03800"
     CDS             complement(747..1907)
                     /locus_tag="VHZ56_03800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018427185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEX4297122.1"
                     /translation="MTEPKPGDATVVNIPRAEKAAPKAEAPVPQPPQPQAAAPELPAP
                     KKKGSLRLILMIAVPLVLVIAGAYFWLSGGRYEDTDNAYVQQAIVSLSPDISGRVTAV
                     SVTENQVVKAGDVMFTIDPQPYQIALDQANAALASARVNVAQLKVAYGTANTQLASAQ
                     QTLTIQQAAYDRQAALVQQGVNSSATLDQPKLSLQQAQSAVSQAQQQVAGAVAALAGN
                     PDIATDDHPAVKAALAAVEQAQRNLQKTTVVAPADGVISQVSSLNVGQFVAQGTTIAS
                     LVETDGTWVEANFKETQLTDITTGMPAVITVDAYPGVKFDAKVTSIGAATGAEFSLIP
                     AQNATGNWVKVVQRIPVRVDITDTKGVALRTGMSANATVDTGHSTLDKMTGH"
     gene            complement(1920..2381)
                     /locus_tag="VHZ56_03805"
     CDS             complement(1920..2381)
                     /locus_tag="VHZ56_03805"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX4297123.1"
                     /translation="MTADFKKEGSIGYLVHDVARLFRRRFEDEARTHGVTLPQWRALG
                     EISQNEGISQVSLAGCIDTDPMTLSGILDRLEKRGLIERYTDPNDSRAKLARMTEAGD
                     ELVSTARNVGRAMYENALDGLSQPERARIAAGLTRIRDNLNQMTAEQKEAV"
     gene            complement(2526..3455)
                     /locus_tag="VHZ56_03810"
     CDS             complement(2526..3455)
                     /locus_tag="VHZ56_03810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013893530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297124.1"
                     /translation="MRPARLGRRWVIASGLSFAAAGFSGVSLASAQRKAATAIIPFQT
                     APFPYEGSVPETGESFMDVDQDGRLGHTSPRGGIYWEDETYNDNSVLLHVPVGFDPDR
                     PGVLVVYLHGNNANLRDTVIGDQHVIDQFDASGLNGLLVAPQLAVNAFDSSAGRFWTP
                     GAFGQFLDEAAKHFGRASKASRLPVVIIAYSGGYNPCAYALAVGGAARRIAGVVLLDA
                     LIAEDDKFIDFVRRSKRSSFFFSAFGASTQAENEKVMASLVRLGIAVETDPPDALKRG
                     TVAFLSTDADHDEFVTSAWVDNPLQWTLSRIAV"
     gene            complement(3452..>4897)
                     /locus_tag="VHZ56_03815"
     CDS             complement(3452..>4897)
                     /locus_tag="VHZ56_03815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013893529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297125.1"
                     /translation="SNPGGFSIVEKYGYTEEAMLSYMHALADGGVLSITLWDKEEPPK
                     SILKLYSTVAEAAKSVDPHGAANSIFATSTYLSTTTVLYKKGGFTPAEVDALRKHTQA
                     MSFDEIYSPGMAYDDKAGEGLLAQYEDSIFGNGDATDATAPATDATGAAAATGASADP
                     TLDNLNSTAADATDATDDSGDAAPTALPSTTLERMFWHTEFFGGWDQVASQYVFDSHP
                     LTNDRPYFAAYVKTPDLLKTLDRLDLFQDDWGYLLLWATLAIAAATAASLIVLPVLFR
                     WRATFSATPGKLGTIVYFACLGLGYIMVEVGLISRFNLALTNPTISASILIGGMLVFS
                     GLGSFVAERIVDRARTVLPVILAGVAVILLFYCFALNSILDVIGAYPYALRLVCCFAL
                     TAPPAFLMGFPMATAMTWLARLNKEHMFVWAWGINGCFSVIGAAAVPLIATSFGLSAV
                     LEASAVAYVVAIPAFFAVTMGARTALRTVPA"
BASE COUNT          807 a         1575 c         1701 g          814 t
ORIGIN      
        1 ccgcggtcga gcagcagctg cagcgcgccg accccgaggg ccagcatgcc gaagccgaag
       61 aaatcgaagc ggcggcgctt gatcgccgtg tcgggcatgt agagcatcag catggcgacg
      121 gtcgcgatgc cgaccggcag gttgatcagg aacacccagc gccagtcgaa agtctcggtc
      181 agatagccgc ccagcgtcgg cccgatgatc ggggcgacca tgatgcccat gccgtagatg
      241 gccatggcct ggccgatgcg ctccttggga ttgatgttga gcagcacggt ttgcgccagc
      301 ggcgcgatca tggcgccgca gatgccctgc aggacgcgga acagcaccat ctcgtcgagg
      361 ctcgtggcga tgccgcagag cgccgaggcg aaggtgaaac cgatgacgga aatgatgaac
      421 agccgcttct ggccgatccg gtcgctcatc cagccggtga gcggcgtcgc gatcgcggcg
      481 gcgacgatat aggacgtcag gacccaggtg atctcgttct gcgccgcacc gagcgaggcc
      541 gccatgtgcg gcaaggcgac gttggcgatc gtggtgtcga gcacctgcat gaccgtgccc
      601 agcatcaggg ccaccgtcag caggcccttg tgcttgacga cgatggtggg cggcgaaaaa
      661 tgttgggtct gcggtgctct ggccacgatc ggcctccagt caaatcagag aaagaggcgg
      721 cgcggccgta gccgcgccag ccgggctcag tggcccgtca tcttgtcgag cgtcgaatgg
      781 ccggtgtcga ccgtcgcgtt ggcgctcatg ccggtgcgca gcgccacacc cttggtgtcg
      841 gtgatgtcga cgcgcaccgg aatgcgctgc accaccttga cccagttgcc ggtcgcgttc
      901 tgcgccggga tcagcgagaa ctcggcgccg gtcgcggccc cgatgctggt caccttggcg
      961 tcgaacttca cgcccggata ggcgtcgacc gtgatcaccg ccggcatgcc ggtcgtgatg
     1021 tcggtgagct gggtctcctt gaagttggct tccacccagg tgccgtcggt ctcgaccagg
     1081 ctcgcgatgg tcgtgccctg ggccacgaac tggccgacgt tgaggctcga gacctggctg
     1141 atcacgccgt cggcaggggc gaccaccgtg gtcttctgca ggttgcgctg cgcctgctcg
     1201 accgccgcca gcgccgcctt gacggccggg tggtcgtcgg tggcgatgtc gggattgccg
     1261 gcgagcgccg cgaccgctcc ggccacctgc tgctgcgcct ggctcaccgc gctctgcgcc
     1321 tgctgcagcg acagcttggg ctggtcgagc gtggcgctcg aattgacgcc ctgctgcacc
     1381 agcgccgcct gccggtcata ggccgcctgc tggatggtca gcgtctgctg cgccgaggcc
     1441 agctgcgtgt tggcggtgcc gtaggcgacc ttgagctggg cgacgttgac gcgcgccgaa
     1501 gcgagcgccg cgttcgcctg gtcgagcgcg atctggtagg gctgcggatc gatggtgaac
     1561 atcacgtcgc cggccttgac gacctggttc tcggtcaccg acacggcggt cacgcggccg
     1621 gaaatgtcgg gcgacagcga gacgatcgcc tgctgcacat aggcgttgtc ggtgtcctcg
     1681 tagcggccac cgctgagcca gaaataggcg ccggcgataa ccagcacgag cggcacggca
     1741 atcatcagga tcagccggag gctgcccttc ttcttgggtg ccggcagctc cggagccgcg
     1801 gcctgcggct gcggcggctg cggcaccggt gcctccgcct tgggagcggc cttctcggcg
     1861 cggggaatat tcacgacggt tgcatcgccg ggcttgggtt cagtcacgcg ggcattcatt
     1921 tagacggctt ccttctgctc ggcggtcatc tggttgaggt tgtcgcggat gcgggtcaga
     1981 cccgcggcga tccgcgcgcg ctcgggctgc gagaggccgt ccagcgcatt ttcgtacatg
     2041 gcgcgcccga cattgcgggc ggtgctgacc agctcgtctc ccgcctcggt catccgggcg
     2101 agcttggcgc ggctgtcatt gggatcggta tagcgctcga tcaggccgcg cttctcgagc
     2161 cggtcgagga tgccgctgag cgtcatcgga tcggtgtcga tgcagccggc gagcgaaacc
     2221 tgggagatcc cctcgttctg ggaaatctcg ccgagcgccc gccactgcgg caacgttacg
     2281 ccatgggtcc gggcctcgtc ctcgaagcgc cggcgaaaca gccgcgcaac gtcgtgcacg
     2341 aggtaaccga tggagccttc cttcttgaaa tccgcggtca tcgcttttct atgtgtgctt
     2401 accataagtg cacatatgat aagcgcactt aggatgtcaa cctgcgttcg gcgggcgtca
     2461 gctgcgacac aaatgcatag gtaagaaagc cttaaggact gggcgtctcc gcgcctcctt
     2521 cgcggtcaga cggcgatccg cgacagcgtc cattgcagcg ggttgtcgac ccaggcgctg
     2581 gtgacgaact cgtcgtggtc ggcgtcggtc gagaggaatg cgacggtgcc gcgtttcagc
     2641 gcatccggtg ggtcggtctc gaccgcgatg ccgagccgaa ccagcgacgc catgaccttc
     2701 tcgttctcgg cctgggtcga tgcgccaaag gccgaaaaga agaaactcga ccgcttcgag
     2761 cgccgcacga aatcgatgaa cttgtcgtcc tcggcgatga gcgcgtcgag caatacgacg
     2821 ccggcgatcc gcctcgccgc cccgcccact gccagcgcgt acgcgcaggg gttgtagccg
     2881 ccgctgtagg cgatgatcac caccggcagg cgcgacgcct ttgaggcgcg gccgaaatgc
     2941 ttggccgcct cgtcgaggaa ctggccgaag gcgcccggcg tccagaatcg cccggcgctc
     3001 gaatcgaagg cgttgaccgc cagttgcggc gccaccagca ggccattgag gccggacgcg
     3061 tcgaactggt cgatgacgtg ctggtcgccg atcaccgtgt cgcgcaaatt ggcgttgttg
     3121 ccgtggagat agaccaccag cacgcccggc cgatccggat cgaagcccac cggcacgtgc
     3181 agcagcacgc tgttgtcgtt gtaggtctcg tcttcccagt agatgccgcc gcgcggcgag
     3241 gtgtggccga gccggccgtc ctgatcgacg tccatgaacg attcgccggt ttcgggaacg
     3301 ctgccctcgt acggaaacgg tgccgtctgg aacggaatga tcgccgtcgc cgccttgcgc
     3361 tgcgccgacg ccagcgagac gccggaaaag cctgcggcgg cgaagctcag gcccgaggca
     3421 atgacccacc ggcgcccgag ccgcgccggt ctcatgcagg caccgtccgc agcgcggtgc
     3481 gcgctcccat cgtcacggcg aagaaggccg ggatggcgac gacgtaggcg acggcgctcg
     3541 cctcgagcac cgccgaaagc ccgaagctgg tggcgatcag cggcacggcg gcggcgccga
     3601 tcaccgaaaa gcagccattg atgccccagg cccagacgaa catgtgctcc ttgttgagcc
     3661 gcgccagcca ggtcatcgcc gtggccatcg ggaagcccat caggaaggcc ggcggcgccg
     3721 tcagcgcgaa gcagcagacg agccgcagcg cgtaggggta ggccccgatg acgtcgagga
     3781 tcgaattgag ggcgaagcag tagaagagga ggatcaccgc gacgcccgca aggatcaccg
     3841 gcagcacggt gcgcgcccgg tcgacgatgc gttcggcgac gaaactgccg aggcccgaga
     3901 acaccagcat gccgccgatc aggatcgagg ccgagatcgt cgggttggtc agcgccaggt
     3961 tgaagcggct gatcagcccg acctccacca tgatgtagcc caggcccagg caggcgaagt
     4021 agacgatggt gccaagcttg cccggggtgg cgctgaacgt cgcgcgccag cggaacagca
     4081 ccggcaacac gatcagcgac gctgccgtgg cggcggcgat cgccagtgtc gcccacagca
     4141 gcagatagcc ccagtcatcc tggaacaggt cgagccggtc gagcgtcttg agcaggtcgg
     4201 gcgttttcac gtaggcggca aaatacggcc ggtcattggt cagcgggtgg ctgtcgaaca
     4261 cgtactggct ggcgacctgg tcccagccgc cgaagaactc ggtgtgccag aacatccgct
     4321 ccagcgtcgt cgagggcagc gccgtcggcg ccgcgtcgcc gctgtcgtcg gtggcgtccg
     4381 tcgcgtcggc agcagtgctg ttgaggttgt cgagcgtcgg gtcggcagag gctccggtgg
     4441 cggcggcagc gcccgtcgcg tccgtggccg gagcggtggc gtcggtcgca tcgccattgc
     4501 cgaagatcga atcctcgtac tgggcgagca gcccctcgcc ggccttgtcg tcgtacgcca
     4561 tgccgggcga gtaaatctcg tcgaacgaca tcgcctgcgt gtgcttgcgc agcgcgtcca
     4621 cctcggccgg ggtgaagccg cccttcttgt agagcacggt ggtggtcgac aggtacgtcg
     4681 aggtcgcaaa gatcgaattg gcggcgccgt gcgggtcgac gctcttcgcc gcctcggcca
     4741 cggtggaata gagtttcagg atcgacttgg gcggctcttc cttgtcccac agcgtgatcg
     4801 acagcacgcc gccatcggcg agggcgtgca tgtagctgag catcgcctct tcggtgtagc
     4861 cgtacttctc gacgatcgag aagccgccgg gattgga
//
LOCUS       DATAZA010000149         2558 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3032910, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000149 DATAZA010000000
VERSION     DATAZA010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2558
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3032910"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..404
                     /locus_tag="VHZ56_03820"
     CDS             <1..404
                     /locus_tag="VHZ56_03820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007812405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="biopolymer transporter Tol"
                     /protein_id="HEX4297126.1"
                     /translation="RLSDVSYPNDGPEYSPDGKWIYFNSERDAKRPGHAQCYRMHADG
                     HHIEQLTHDERVNWFPHLSPDGTQVIYISYPPGTAGHPANHEVVLKRMPPDGSSHDEV
                     VALYGGQGTINVNSWAPDSRRFAYVAYPVFD"
     gene            complement(409..1122)
                     /locus_tag="VHZ56_03825"
     CDS             complement(409..1122)
                     /locus_tag="VHZ56_03825"
                     /inference="COORDINATES: protein motif:HMM:TIGR02453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2461 domain-containing protein"
                     /protein_id="HEX4297127.1"
                     /translation="MAAKAKAAISGPGFSGFPKATTTFLKGIAAHNDKAWFEAHRDLY
                     DAGYVAPARAFVEALGPKLRAISPEVQFEPKVNGSLGRINRDIRFSKDKRPYKDHLDL
                     WFWHGDRKGWACPGFWFRLTANEVYLGVGMHHFEKEQLEAFRNSVVHPRSGRALQAVA
                     KAIETAGHEVGGKSRKLPPRGFETEPERAEFLLYEALYTGTTLPVSSAGEPDFAEACA
                     KHYASVWPLGQWLLEEVSA"
     gene            complement(1221..2072)
                     /locus_tag="VHZ56_03830"
     CDS             complement(1221..2072)
                     /locus_tag="VHZ56_03830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010912535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297128.1"
                     /translation="MTTLPASAISLNLGGNGGGGLLNLGGNGGGSGGGNGAAVPVNTG
                     GTGGTSGGGLLNLGGNGNATPATATANLLGNGPSTATVNLGGEGGTNGNVLLDLFGNG
                     SGGGTTGSVNLGSGGLVGGLGGGTDSVDLNLFGNGGAGGTGGTGDGGNGGTGGTGGTG
                     GTGGVGGTGGTGIGGIQVASIDASAGANCFVPNATQLSKLVNRHTYNVSTFASWGHVT
                     NIKIVDAGVCDSASGEFASQPNISRLQSYLGANPALSSTLAKQGHSAGDVIAADKSGN
                     TLIFYVI"
     gene            complement(2313..>2558)
                     /locus_tag="VHZ56_03835"
     CDS             complement(2313..>2558)
                     /locus_tag="VHZ56_03835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297129.1"
                     /translation="AGNRAICLPAFGRSEVSSWLPRKDWAGLQRVLPTYMNDILTLRQ
                     LLANCASPTQRQALNVGDLNRVIGVDIQAGKPILYML"
BASE COUNT          415 a          858 c          835 g          450 t
ORIGIN      
        1 agcggctctc cgacgtgagc tatcccaacg acgggcccga atattcgccc gacggcaagt
       61 ggatctactt caactccgag cgcgacgcga agcgcccggg ccacgcccag tgctaccgca
      121 tgcacgcgga cggccaccat atcgagcagc tgacccacga cgagcgcgtc aactggttcc
      181 cgcatctgtc gccggacgga acgcaggtga tctacatcag ctatccgccg ggaaccgcgg
      241 gccaccccgc caaccacgaa gtggtcctca agcgcatgcc gcccgacggc agcagccacg
      301 acgaagttgt cgcgctctat ggcggccagg ggacgatcaa cgtcaactcc tgggcgcccg
      361 acagccgccg cttcgcctac gtcgcctatc cggtgttcga ctgaccggct acgccgagac
      421 ttcctcgagc agccattggc cgagcggcca gaccgaggcg tagtgcttgg cgcaggcttc
      481 ggcgaaatcg ggctctcccg cgctcgagac gggcagcgtc gtgccggtat agagcgcctc
      541 gtagagcagg aactcggccc gttcgggttc ggtctcgaag ccccggggcg gcagcttgcg
      601 cgacttgccg ccaacctcgt gccccgccgt ctcgatcgct ttggccacgg cctgcagcgc
      661 cctgccggag cgcggatgca cgaccgagtt ccggaacgcc tcgagttgct ctttttcgaa
      721 atggtgcatg ccgacgccga gatagacctc gttcgctgtc agccggaacc agaatccggg
      781 gcaggcccag cccttgcggt cgccgtgcca gaaccagaga tcgagatgat ccttgtacgg
      841 ccgcttgtcc ttggaaaagc ggatgtcgcg gttgatgcgg ccgagcgagc cgttgacctt
      901 cggctcgaac tgcacctccg gcgaaatcgc ccggagcttc ggcccgagag cttcgacgaa
      961 ggcgcgggcc ggcgccacat agccggcgtc atagaggtcg cggtgcgcct cgaaccaggc
     1021 cttgtcgttg tgcgccgcaa ttcccttgag gaacgtcgtg gtcgctttcg gaaagccgct
     1081 gaatccaggg cctgaaattg ccgccttcgc cttcgccgcc atccgagcct ccgctggccg
     1141 gaaccctagc gcaacgcggc cttgaagaga aagcggcacg ggttgctggc ccgcgccgct
     1201 ccagttcaag tgaggagagg ctagatcacg tagaagatca gcgtgttgcc gctcttgtcg
     1261 gcggcgatga cgtcgccggc cgaatggccc tgcttcgcca gcgtggaact cagggccggg
     1321 ttggctccga ggtaggattg cagccggctg atgttgggct ggctggcgaa ctcgccgctg
     1381 gcgctgtcgc agaccccggc gtcgacgatc ttgatgttgg tgacgtggcc ccagctggcg
     1441 aacgtcgaga cgttataggt gtgccggttc accagcttgc tgagctgcgt cgcgttgggc
     1501 acgaagcagt tggcgccggc gctggcgtca atggaggcga cctggatgcc gccgatgccg
     1561 gtgccgccgg tgccaccgac gccgccagtc ccgccggtcc cacccgtgcc gccggttccg
     1621 ccgttgccac cgtcgccggt gccgccggtc ccgcccgcac cgccgttgcc gaagaggttg
     1681 aggtcgacgc tgtcggtgcc gccgccgagg ccgcccacga ggccacccga accgaggttc
     1741 acgctgcccg tggtgccgcc gccgctgcca ttgccgaaca ggtcgagcag gacgttgccg
     1801 ttggtgccgc cctcgccgcc gagattgacc gtggccgtgc tgggcccgtt gccgagcagg
     1861 ttggccgtcg ccgtggccgg cgtcgcgttg ccgttcccgc ccagattgag caggccgccg
     1921 ccgctggtgc cgccggtgcc gccggtattg acggggaccg cggcaccatt gccgccgcca
     1981 ctgccgccac cattgccgcc aaggttcagc agcccgccgc cgccattgcc tccgaggttc
     2041 agcgagatcg ccgaggccgg gagggtcgtc aacaaagctg caactatcgt aatcgtcgaa
     2101 attttaacaa cgtttagcat ctgcttctcc tcaattggag tcgctctgac gctgtgggcg
     2161 gatattatgt attcgccctt tcaggagcga tctgaccaaa gtaagggctc agaaagtgaa
     2221 tagtttccta tgcgttcgag atgcggttat cggaggaaaa acggggatga tcgagtttta
     2281 atcatccccg ttcttgcgcg tttgctaacg ccctacagca tatagaggat cggctttccg
     2341 gcctggatat cgacgccgat cacccggttg aggtcgccga cgttgagcgc ctgccgctgc
     2401 gtcgggcttg cgcagttggc gagcagctgc cgcagcgtca ggatgtcgtt catgtaggtg
     2461 ggcagcaccc gctgcaggcc ggcccagtcc ttgcgcggca gccagctcga cacctcggac
     2521 cgcccgaacg ccggcaggca gatggcgcgg ttgccggc
//
LOCUS       DATAZA010000150         5001 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1408934, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000150 DATAZA010000000
VERSION     DATAZA010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5001
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1408934"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..655
                     /locus_tag="VHZ56_03840"
     CDS             <1..655
                     /locus_tag="VHZ56_03840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007599747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HEX4297130.1"
                     /translation="GRITDIYHLLPESGLFIIGEHFLRIEMNLLGVPGATLRDVKSVQ
                     SLNVALGQCRKFIRKHRLKTISGGDTAGSAREIAERGDKSVAAIASRFAAEVYGLDIL
                     AENIEDARHNTTRFLVVSRTPQTARRGAKPVKTTFVFRVRNVPAALYKAMGGFATNGV
                     NMTKLESYMLDGSFTATQFYADIEGHPDDRAVQLAFEELGFFTDYFHVLGVYPAGRP"
     gene            complement(666..1943)
                     /gene="dinB"
                     /locus_tag="VHZ56_03845"
     CDS             complement(666..1943)
                     /gene="dinB"
                     /locus_tag="VHZ56_03845"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018427999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEX4297131.1"
                     /translation="MFFIRGHSGAAMGAATILHADLDAFYASVEQLLDPSLRGRPIAV
                     GGSVVLAASYDAKAFGVHGGMPGRRARELCPQLTFVGGHFSEYQRLGDAAIRILDDFT
                     PLVERISIDEAFADVAGTAHLFGPPEAVAQTVRRRVREELGLAISIGVARTKHLAKIA
                     SQVAKPDGLCVVDPDRELTFLHDLPVELMWGVGPATRARLATAGIATIGQLAASPGQS
                     LERLLGPAASEKLRALAWNSDPRRIVTDRRARSAGAQSALGRKPAEDRFVRPALRHLA
                     DRIGTRLRAKSLSGRTVTVRVRFADLRSVTHAATLDAPIAATTTLAEIAEELVGEVLR
                     QHPEERTISLLAIAVSHLERQAVLQLELPLGAADEPRRPGTARGASRWLADKAMDKVR
                     DRYGWEAIGYGSVVLEGRRLVPDAFRELAEKEL"
     gene            complement(2018..2536)
                     /gene="msrA"
                     /locus_tag="VHZ56_03850"
     CDS             complement(2018..2536)
                     /gene="msrA"
                     /locus_tag="VHZ56_03850"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006200514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEX4297132.1"
                     /translation="MSSRTERAVLAGGCFWGAQDLIRRQPGVISTRVGYSGGDVANAT
                     YRSHGNHAEAVEIVFDPDKTSFRKLLEFFFQIHDPSTKNRQGNDVGMSYRSAIFYTSP
                     EQKQVAEDTIADVNASGLWPGKAVTEVAAAGPFWQAEPEHQDYLIKHPGGYTCHFVRP
                     GWVLPKRAGVAA"
     gene            2817..3848
                     /locus_tag="VHZ56_03855"
     CDS             2817..3848
                     /locus_tag="VHZ56_03855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX4297133.1"
                     /translation="MHKNHILPILAGGVLALVAFAAPAFAGTLDDVKTKGFLQCGVNE
                     GLPGFGNPDSTGKYTGFDVDYCRAVSAAIFGDPDKVKYTPLGGTNRFPALQSGEVDLL
                     VRNTTWTMSRDTTLGFTFAGVNYYDGEGFMVRKSANIAHVKDLDGATICVQSGTDTVT
                     GLADYFKKNNLKYTPLVIDALADVNKAYDDGRCDALTTDRSGLAANRLQMTKPDDHII
                     LPEIISQEPLGPVVRNNDVQWFQIVKWVSNALLDAEYLGVTQANVDDMAKNSQDSAVQ
                     RLLGVGDNDFGKSMGLDAKWAYNVIKGVGNYGDVYERNLGLNTPMQLARGLNAQWSQG
                     GLQYGIPIE"
     gene            3923..>5001
                     /locus_tag="VHZ56_03860"
     CDS             3923..>5001
                     /locus_tag="VHZ56_03860"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_process: GO:0015837 - amine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX4297134.1"
                     /translation="MAAIDAGRLTASRERWYNNPLLRSIAYQVILVVAVVGFIAWLAH
                     NTVNNLHDRGIASGFGFLGRRAGFDITTFLPTNSDSTYGYMMLAGLVDTIVVSILSIV
                     IATIFGVIVGIARLSRNWLIRTIATVYVETLRNIPPLLVILFWYLAVIAALPNIRDAI
                     QLGPDISLSNRGVFVPRPIFGDGFQYTVIAFVVALIVAYAVRRWAHARHMATGRSFPA
                     GWATLGIIVVLTLGTFMLTGDPLAFEVPVKTRFNINGGLTLTPEFTSLFSALGIYTAS
                     FIAEIVRAGIMSVSHGQTEAARSLGLKQGQLLRLVVMPQALRVIIPPLSSEYLNITKN
                     TSLALAIGFADLVAVGNNVLNPTGQS"
BASE COUNT          848 a         1783 c         1538 g          832 t
ORIGIN      
        1 tggccgtatc accgacatct atcacttgct gcccgaaagc ggcctgttca tcatcggcga
       61 gcacttcctg cgcatcgaga tgaacctcct cggggtgccc ggcgcgacgc tgcgtgacgt
      121 caagtccgtg cagtcgctca acgtcgccct tggccagtgc cgcaagttca tccgcaagca
      181 ccggctgaag accatcagcg gcggcgacac cgccggcagc gcccgcgaaa tcgccgagcg
      241 gggcgacaaa tccgtcgccg ccatcgccag ccgcttcgcg gccgaggtct atggcctcga
      301 catcctcgcc gagaacatcg aggacgcccg gcacaacacc acgcgcttcc tcgtcgtgtc
      361 gaggacgccg caaacggccc gccgcggcgc gaagccggtc aagaccacct tcgtgttccg
      421 ggtccgcaac gtcccggcgg cgctctacaa ggcgatgggc ggctttgcca ccaacggcgt
      481 caacatgacc aagctcgaaa gctacatgct cgacggctcg ttcaccgcca cccagttcta
      541 cgccgacatc gagggccatc cggacgaccg ggcggtgcag ctcgccttcg aagagctcgg
      601 gttcttcacc gactatttcc acgtgctcgg cgtctatccg gccggcaggc cctaacgccc
      661 ggccgctaga gctccttttc cgccaactcg cggaaggcat cggggacgag ccgcctgcct
      721 tcgagcacca ccgagccgta gccgatggct tcccagccat agcggtcgcg caccttgtcc
      781 atcgccttgt ccgccagcca gcgcgaggcg ccgcgcgccg ttcccggccg ccgcggctcg
      841 tcggcagcgc ccagcggcag ctcgagttgc agcaccgcct gccgctcgag gtgagatacg
      901 gcgatggcca gcagcgagat ggtgcgctct tccgggtgct ggcgcagcac ctcgcccacc
      961 agctcctcgg cgatctcggc cagcgtcgtc gtcgccgcga tcggtgcatc gagcgtcgcg
     1021 gcgtgcgtca ccgatcgcag atcggcgaag cgcacccgta ccgtgaccgt gcggcccgag
     1081 agcgacttgg ccctgagccg ggtgccgatg cggtcggcca ggtgccgcag cgccggccgc
     1141 acgaaacgat cctcggccgg cttgcggccg agcgccgact gggctccggc ggaccgcgcc
     1201 cgccggtcgg tgacgatccg tcgtggatcg ctgttccagg ccagtgcccg caacttttcg
     1261 ctggccgccg gtccgagcag ccgctcgagc gactggcccg ggctcgccgc cagctggccg
     1321 atggtcgcga tgccggcggt tgccagccgg gcccgggttg cggggccgac gccccacatc
     1381 agctcgaccg gcaggtcatg gaggaacgtc agttcgcggt ccgggtcgac cacgcagaga
     1441 ccatccggct tcgccacctg cgaggcgatc ttggccaggt gcttggtccg cgccactcct
     1501 atcgagatag ccagtcccaa ttcctcacgc acccgtcgcc ggacggtttg cgcgaccgct
     1561 tccggcggtc cgaacagatg cgccgtgccg gccacgtccg cgaacgcctc gtcgatcgag
     1621 atccgctcga ccagcggcgt gaagtcgtcg aggatgcgga tggcggcgtc gcccagccgc
     1681 tggtattcgc tgaaatggcc gccgacgaat gtcagctgcg gacagagctc gcgggcccgc
     1741 cgcccgggca tcccaccatg caccccgaac gccttggcgt cgtacgacgc agcgagaacc
     1801 acgctgccgc ccaccgcaat cggcctgccg cgcagcgacg gatcgaggag ctgttcgacc
     1861 gacgcgtaga acgcatcgag atcggcgtga aggatcgtcg cagcgcccat cgcggccccc
     1921 gaatggccgc ggatgaagaa cataaagtga acaaatgtca agtcaaaggc cgcccgcggc
     1981 aatgcaggcg gcctcgaaaa taccggcgcg cagcggccta agcggcgacg cccgcccgct
     2041 tcggcaggac ccagcccggc cgcacgaaat ggcaggtgta gccgccggga tgcttgatca
     2101 gatagtcctg atgctccggc tcggcctgcc agaatggccc ggccgccgct acctcggtca
     2161 cggcctttcc gggccacagc ccggaggcgt tgacgtcggc gatggtgtcc tcggccacct
     2221 gcttctgctc cggcgaggtg tagaagatcg ccgagcggta gctcatgccg acatcgttgc
     2281 cctggcgatt cttcgtcgac ggatcgtgga tctggaagaa gaattccagc agcttgcgga
     2341 agctggtctt gtcgggatcg aagacgattt ccaccgcctc ggcatggttg ccgtggctgc
     2401 gataggtggc gttggcgaca tcgccgcccg aatagccgac ccgggtcgag atcaccccgg
     2461 gctggcgccg gatcaggtcc tgtgcgcccc agaagcaccc gccggcgagg acggcacgct
     2521 cggtccttga actcatggca ttctcctcat cgaactgatg ccgccaatgt aggcattggc
     2581 ggtcgccttc gccacggcgg gacgacggcc gcggccctca cacttgcgtc agcgttcgtt
     2641 gcgagcgcca tctgccgcaa aaaccttcac tccgggccgg tcgctgcaca atcttttggc
     2701 agtcgcgccg tttgcatccc ttgaaacaac atcatacgct caatcttacg cttccccgga
     2761 agccagcagc cgtcacgcgc tgcgcaggga atgtagaaca acaatcgagg acaaacatgc
     2821 acaaaaacca cattctgccg atcctggcgg gcggcgtgct tgcgctggtg gccttcgcgg
     2881 cgccggcgtt tgccggcacg ctcgatgatg tgaagaccaa gggcttcttg cagtgcggcg
     2941 tcaatgaagg cctgccgggg ttcggcaatc cggactcgac cggcaagtac accggcttcg
     3001 acgtcgatta ctgccgcgcc gtgtcggccg cgatcttcgg cgacccggac aaggtgaagt
     3061 acaccccgct cggcggcacc aaccgcttcc cggcgctgca gtcgggtgaa gtcgacctgc
     3121 tggtgcgcaa caccacctgg acgatgtcgc gcgacaccac gctcgggttc accttcgcgg
     3181 gcgtcaacta ctatgacggc gaaggcttca tggtgcgcaa gagcgccaac atcgcccacg
     3241 tcaaggacct cgacggcgcc accatctgcg tgcagagcgg taccgacacg gtcaccggcc
     3301 ttgccgacta cttcaagaag aacaacctca aatacacccc gctggtcatc gacgcgctgg
     3361 ccgacgtgaa caaggcctat gacgacggcc gctgcgacgc gctgacgacc gaccgctcgg
     3421 gcctcgccgc caaccgcctg cagatgacca agcccgacga ccatatcatc ctgcccgaga
     3481 tcatctcgca ggagccgctt ggtccggtgg tccgcaacaa cgacgtgcag tggttccaga
     3541 tcgtcaagtg ggtcagcaac gccctgctcg atgccgagta tctcggcgtg acccaggcca
     3601 acgtcgacga catggcgaag aactcgcagg actcggcggt ccagcgcctg ctcggcgtcg
     3661 gcgacaacga cttcggcaag tccatggggc tcgatgccaa gtgggcctac aacgtgatca
     3721 agggcgtcgg caattacggc gacgtctacg agcgcaacct cggcctcaac accccgatgc
     3781 agctggcgcg cgggctcaat gcccagtgga gccagggcgg cctgcaatac ggcattccga
     3841 tcgagtgatc ctcggggccg ggcggcagcg cccggcccct tccatctcgc gggcaggcaa
     3901 gtgaaggtcg gggatcggcg gaatggcagc gattgacgca gggcgcctga cggcgtcgcg
     3961 ggagcgttgg tacaacaatc cattgctgcg cagcatcgcc taccaggtga tcctggtcgt
     4021 ggccgtggtc ggcttcattg cctggctggc ccacaacacc gtcaacaacc tgcacgatcg
     4081 cggcatcgcc tcgggcttcg gcttcctcgg ccgccgcgcc ggcttcgaca tcaccacctt
     4141 cctgccgacc aactcggatt cgacctacgg ctacatgatg ctggccggcc tggtcgacac
     4201 catcgtcgtc tccatcctct cgatcgtcat cgccaccatc ttcggcgtca tcgtcggcat
     4261 cgcccgcctg tcgcgcaact ggctgatccg caccatcgcc accgtctacg tcgagacgct
     4321 gcgcaacatc ccgccgctgc tggtcatcct cttctggtac ctggcggtga tcgccgccct
     4381 tccgaacatc cgcgacgcca tccagctcgg ccccgatatt tcgctgtcga accgtggcgt
     4441 gttcgtgccg cggccgattt tcggcgatgg cttccagtac accgtcatcg ctttcgtggt
     4501 ggcgctgatc gtcgcctacg ccgtccgccg ctgggcccac gcccggcaca tggcgaccgg
     4561 caggagcttt ccggccggct gggcgacgct cggcatcatc gtggtcttga ccctcggaac
     4621 cttcatgctc accggcgatc ccctggcttt cgaggtcccg gtcaagacgc ggttcaacat
     4681 caatggcggc ttgaccctga cgcccgaatt cacctcgctg ttttccgcgc tcggtatcta
     4741 cactgcctcg ttcatcgccg aaatcgtgcg cgccggcatc atgtcggtga gccacgggca
     4801 gaccgaagcg gcgcgctccc tcggcctcaa acagggtcag ttgctgcggc tcgtcgtcat
     4861 gccgcaggcg ttgcgggtga tcatcccgcc gctgtccagc gaatacctca acatcaccaa
     4921 gaacacctcc ctggccctcg ccatcggctt cgccgacctc gtcgcggtgg gcaacaacgt
     4981 gctcaatccg accggccagt c
//
LOCUS       DATAZA010000151         4523 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_712035, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000151 DATAZA010000000
VERSION     DATAZA010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4523
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_712035"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(79..1056)
                     /locus_tag="VHZ56_03865"
     CDS             complement(79..1056)
                     /locus_tag="VHZ56_03865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HEX4297135.1"
                     /translation="MNFALDGGSITLIVLGVLAVLVLVSAVKTVPQGYNYTVERFGRY
                     IRTMKPGLSVIVPFVDGIGRKINVMEQVLEVPQQEVITKDNASVTANAVTFYQILDAA
                     AAAYEVTNLQNAVLNLTMTNIRTVMGSMDLDELLSHRDEINSRLLRVVDAAVSPWGIK
                     ITRIEIKDIDPPRDLVESMGRQMKAEREKRATVLEAEGRRQSAILTAEGMKQSQVLEA
                     EGRREAAFRDAEARERSAEAEAKATKVVSEAIASGSVQAINYFVANNYIKALESLARS
                     PNQKVLMLPVEAASVIGALGGIAEIARETFGAEKPATRPAGGRPPSTGA"
     gene            1210..2097
                     /locus_tag="VHZ56_03870"
     CDS             1210..2097
                     /locus_tag="VHZ56_03870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HEX4297136.1"
                     /translation="MAGSRPMWKGQLRLSLVSINVEMFTAHKSGATTAFNQIHEPTGK
                     RVHYQKVVDGVGPVSADDIRKGYEYEKGEYVLIDDDELDAVKLETKKTLDLVQFVDGD
                     EIPPLYYDAAYYLAPADELAEDAFRVVRDAMRKAGKVGLGQLALRGKEYLVSIRPCGK
                     GMLLETLHYEEEIKKSDAFFSEIPSKSADDDLLAVATALIDKKTDKFDPRIFKDHYQA
                     ALRELIARKLKSKGRKIEVDDEKPRKESGNVIDLMSALKKSLESGERTPAAKASGKPA
                     KKAPTRKAAARPAPRKKAG"
     gene            2131..>4523
                     /gene="ligD"
                     /locus_tag="VHZ56_03875"
     CDS             2131..>4523
                     /gene="ligD"
                     /locus_tag="VHZ56_03875"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF004628.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HEX4297137.1"
                     /translation="MPTRTRSSLETYQAKRDFTKTAEPSGKRAGTRRGKALSFVVQKH
                     DATRLHYDFRLELDGVLLSWAVTKGPSTNPADKRLAVHVEDHPLDYGGFEGTIPEGEY
                     GGGTVMLWDEGTWEPIGDPHEGLAKGDLKFTLHGKRMKGSWVLVHMKGRDAKKRDGST
                     RENWLLIKHQDEYATTADDLTEKFTTSVETGRDLGGIAKGNKPRRKSASAAAVPNTNV
                     WTRKGAVALPEFQPPELATLVDEIPTGRDWLFEMKYDGYRALAAIAGDQVRLYTRHAN
                     DWTVQFQTLVEPLSRITGGDALIDGEIVAFKDGRTDFSTLKDALSSGAPLTYFVFDLL
                     ELDGEDLRRLPLVERKAKLRRLIGKTRQTDPVQFSEHVVGEGEKFYKAMCEGGFEGAI
                     AKLGRSHYIGDRTRDWLKLKCVHRQEFVIGGWRPSEKKSTFASLLLGTWEGGRLVYRG
                     RVGTGFNARSAADLQQKMDARSRQTSPFADAPRDISRRARWIDPELVGEVAFTEFTSD
                     GHLRHPSFMGLREDKGARDVQLERPAPPPAAAKAKPKPGSKAKALASIELTDEMGEKA
                     AKRLGIHLTHPDKIVYAPAVTKAQLVAYYDTVAERMLPHIGKRPLSLVRLPTGSKKPF
                     FQKHDSGGFPAAFKKVQITETTGPTDIYLYIEDEAGLAASVQMNALELHIWGSHIDRL
                     EQPDRIIFDIDPDEGLDFAATRQAAADIRDRLATLGLKTYPMVTGGKGIHVIAPLRPT
                     LEWPAVKSFCHAFAEKLATDEPDRFTANIRKVNRKGRMFVDYLRNERGATAVCPFSTR
                     "
BASE COUNT          862 a         1559 c         1431 g          671 t
ORIGIN      
        1 accagcccgg cgacgaacca gccccacgga ccgtacgaga taaagagatt gagcagaacc
       61 attggaatgc tcctctgatc aggcgccggt cgaaggtgga cggccgccgg ccgggcgggt
      121 cgccggcttt tccgccccga aggtctcgcg ggcaatctcg gcgatgccgc ccagcgcccc
      181 gatgacgctc gccgcctcga ccggcagcat cagtaccttc tggttgggcg agcgcgccag
      241 gctctcgagc gccttgatgt agttgttggc gacgaagtag ttgatcgcct gcacgctgcc
      301 cgaagcgatc gcctccgaca ctaccttggt cgccttggcc tcggcttccg ccgagcgttc
      361 gcgggcctcg gcgtcgcgga acgccgcctc gcgccgcccc tcggcttcca gcacctgcga
      421 ctgcttcatg ccctcggccg tgaggatggc gctctgccgc cggccctcgg cctcgaggac
      481 ggtggcgcgc ttctcgcgct cggccttcat ctgccggccc atcgattcga ccaggtcgcg
      541 cggcggatcg atgtccttga tctcgatacg ggtgatcttg atcccccacg gcgacaccgc
      601 cgcgtcgacg acacgcagca gccgcgagtt gatctcgtcg cgatggctga gcagctcgtc
      661 gaggtccatc gagcccatca ccgtacggat gttggtcatc gtcaaattga gcacggcgtt
      721 ctgcagattg gtcacctcgt aggccgccgc cgccgcatcg aggatctggt agaacgtcac
      781 cgcattggcc gtcaccgacg cgttgtcctt ggtgatgacc tcctgctgcg gcacctccag
      841 cacctgctcc atcacgttga tcttgcggcc gataccgtcg acgaacggca cgatcacgct
      901 gagccccggc ttcatcgtcc ggatgtaccg gccgaagcgc tccacggtgt aattgtagcc
      961 ctgcggcacg gttttcaccg ccgacaccag gaccagcacc gccagcacgc ccagcacgat
     1021 gagggtgata ctgccgccgt cgagcgcgaa attcatcgaa actctcccct cgcggacgcc
     1081 ggggtgaacg gttcggcgtc ggctcaccct aaaatatgtg catcccgccg ccggtacaat
     1141 ggaagcggaa cgaatggccg aagagtcccg ttgaatccgc tgaattgtgt ccagctgagg
     1201 ggtgccggaa tggcgggttc gcgtccgatg tggaaaggcc agctgcggct gagcctcgtt
     1261 tcgatcaatg tcgagatgtt cacggcgcac aaatccggcg ccaccacggc cttcaaccag
     1321 atccacgagc cgaccggcaa gcgcgtccac taccagaagg tggtcgacgg cgtcggcccg
     1381 gtgagcgccg acgatatccg caagggctac gagtacgaaa agggcgagta cgtcctcatc
     1441 gacgacgatg aactcgatgc cgtcaagctc gagaccaaga agaccctcga cctcgtgcag
     1501 ttcgtcgacg gcgacgaaat cccgccgctc tactacgacg ccgcctacta tctcgccccg
     1561 gccgacgaac tcgccgagga tgcgttccgc gtcgtgcgcg acgccatgcg caaggccggc
     1621 aaggtcggcc tcggccagct ggcgctgcgc ggcaaggaat acctcgtgtc catccggccg
     1681 tgcggcaagg gcatgctgct cgaaacgctg cactacgagg aggagatcaa gaagtcggac
     1741 gcgttcttct ccgagattcc ctcgaaatcg gccgacgacg acctgctcgc cgtggcgacg
     1801 gcgctgatcg acaagaagac cgataaattc gaccccagga tcttcaagga ccactaccag
     1861 gcggcgctgc gcgagctgat cgcccgcaag ctcaaatcga agggccgcaa gatcgaggtc
     1921 gacgacgaaa agccgcgcaa ggagtcgggc aacgtcatcg acctcatgtc ggccctgaag
     1981 aaaagcctcg agagcggcga acggacgccc gcggcgaagg cctccggcaa gccggcgaag
     2041 aaggcgccca cccgcaaggc cgccgccagg cctgcgccgc gcaagaaggc gggctgagat
     2101 gcgcggggcg gaacccccac ggggctagcg atgccaaccc ggacaagatc gtcgctcgag
     2161 acctatcagg ccaaacgcga cttcaccaag accgccgagc cttccggcaa gcgcgccggc
     2221 acacgcaggg gcaaggcgct cagcttcgtc gtgcagaaac acgacgcgac gcggctgcac
     2281 tatgacttcc ggctcgagct cgatggcgtg ctgctgagct gggcagtgac caaggggccc
     2341 tcgaccaacc ccgccgacaa gcgcctcgcg gtgcatgtcg aggaccaccc gctcgactat
     2401 ggcggcttcg agggcaccat ccccgagggc gagtatggcg gcggcacggt gatgctgtgg
     2461 gacgaaggca cctgggagcc gatcggcgac ccgcacgagg gcctcgccaa gggcgacctc
     2521 aaattcacgc tgcacggcaa gcgcatgaag ggcagctggg tgctggtcca catgaagggc
     2581 cgcgacgcga agaaacgcga cggctcgacc cgtgagaact ggctgctgat caagcatcag
     2641 gacgaatacg ccaccaccgc cgatgacctg accgaaaaat tcaccaccag cgtcgagacc
     2701 ggccgcgatc tgggcggcat cgccaagggc aacaagccgc gccgcaaatc cgccagcgcg
     2761 gcggcggtgc cgaacaccaa tgtgtggacc cgcaagggcg cggtggcgct tcccgagttc
     2821 cagccgcccg agctggcgac gctggtcgac gaaatcccca ccggccgcga ctggctgttc
     2881 gagatgaagt acgacggcta ccgcgccctc gcggccatcg ccggcgacca ggtccgcctc
     2941 tatacccgcc atgccaacga ctggaccgtg cagttccaga ccctggtgga accgctttcc
     3001 aggatcaccg ggggcgacgc cctgatcgac ggcgagatcg tcgccttcaa ggacggccgg
     3061 acagatttct cgaccctcaa ggacgcgctg tcgagcggcg cccccctcac ctatttcgtc
     3121 ttcgacctgc tcgagctgga cggcgaggat ctgcgccggc tgccgctggt ggagcgcaag
     3181 gcgaagctgc gccggctaat cggcaagacg cggcagacgg acccggtgca attctccgag
     3241 cacgtcgttg gcgagggcga gaaattctac aaggcgatgt gcgagggcgg cttcgaaggc
     3301 gccatcgcca agctcggccg cagccactac atcggcgacc ggacccgcga ctggctgaag
     3361 ctcaaatgcg tccaccggca ggaattcgtc atcggcggct ggcgcccgtc ggagaagaaa
     3421 tcgacgttcg cgtcactgct gctcggcacc tgggagggag ggaggctggt ctatcgcggc
     3481 cgcgtcggca ccggcttcaa cgcccgcagc gccgccgacc tgcagcagaa gatggatgcc
     3541 cggtcgcgcc aaacctcgcc gttcgccgac gcgccgcgcg acatctcgcg ccgcgcccgc
     3601 tggatcgatc cggagctggt gggcgaggtc gccttcaccg agttcacctc cgacggccat
     3661 ttgcgccacc cttcgttcat gggtttgcgg gaggataagg gcgccagaga cgtacagctg
     3721 gagcggccgg cgccgcctcc agccgcagcg aaggcgaagc cgaaaccggg atcgaaagcc
     3781 aaggccttgg ccagcatcga gttgacggac gaaatggggg agaaggccgc caagcgcctc
     3841 ggcatccatc tcacgcaccc cgacaagatc gtctatgcgc ccgccgtgac caaggcgcag
     3901 ctcgtcgcct attacgacac cgtggccgag cgcatgctgc cgcacattgg caagcggccg
     3961 ctgtcgctcg tgcgcctgcc gaccggcagc aagaagccgt ttttccagaa gcacgattcc
     4021 ggcggcttcc cggccgcctt caagaaggtg cagatcaccg agaccaccgg gcccaccgac
     4081 atctacctct acatcgagga cgaagccggg ctcgccgcca gcgtgcagat gaacgcgctc
     4141 gagctccata tctggggcag ccacatcgac aggctcgagc agccggaccg catcatcttc
     4201 gatatcgacc ccgacgaggg gctcgatttc gccgcgacgc ggcaggcggc cgccgacatc
     4261 cgcgaccggc tcgccacgct cgggctgaag acctacccga tggtcaccgg cggcaagggc
     4321 atccacgtca tcgcgccgct gcggccgacg ctcgaatggc cggcggtgaa atcgttctgc
     4381 cacgccttcg ccgaaaagct cgcgaccgac gagcccgacc gcttcaccgc caacatccgc
     4441 aaggtcaatc gcaagggccg gatgttcgtc gactacctgc gcaacgagcg cggcgccact
     4501 gcggtgtgtc cgttttcgac ccg
//
LOCUS       DATAZA010000152         3370 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3265382, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000152 DATAZA010000000
VERSION     DATAZA010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3370
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3265382"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2160
                     /locus_tag="VHZ56_03880"
     CDS             <1..2160
                     /locus_tag="VHZ56_03880"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HEX4297138.1"
                     /translation="GGALGVKDIVLGMAHRGRLNVLTQVMMKPHRALFHEFKGGAYYS
                     EDVEGSGDVKYHLGASSDREFDGNWVHLSLTANPSHLEIVDPVVLGKARAKQDQRSAV
                     DGHFVFDTRQTDRSVVLPLLIHGDAAFAGQGIIAECLGLSGLKGHRTGGSVHFVINNQ
                     IGFTTSPINSRSSPYPTDVAKMIEAPVFHVNGDDPEAVVFVSRVATEFRQRFGRPVVV
                     DMFCYRRFGHNEGDEPSFTQPLMYSKIRSHKTTLEIYSERLVGEGLVTTEDVDKLKAD
                     WRAKLESEFEAGQDFRPNKTDWLDGQWKDLKRADADGPRRGDTGVPLEELTAIGTAMT
                     RVPAGFNVHKTVRRFLDNRLAAIESGEGIDWATGESLALGTLLTEGHSVRLSGQDSER
                     GTFTQRHSVLTDQETGETYTPLNNVAPDQQRYEVINSMLSEEAVLGFEYGYSLAEPTT
                     LTLWEAQFGDFANGAQVVIDQFISSGERKWFRMSGLVMLLPHGYEGQGPEHSSARLER
                     YLQLCAEDNMQVCNCTTPANYFHALRRQVKRDFRKPLILMTPKSLLRHKRATSTLSEM
                     GPESCFHRLLWDDAEAPGPKKTTIQLVPDEQIRRVVLCSGKVYYDLLEDREKRGVNDV
                     YLLRLEQLYPFPAKALLDELNRFKNAEVVWCQEEPKNMGGWSFVQPYVDWVLEQMGRA
                     NDRPRYVGRAASASTATGLMRTHLAQLQAFLEEAFAK"
     gene            2219..>3370
                     /gene="odhB"
                     /locus_tag="VHZ56_03885"
     CDS             2219..>3370
                     /gene="odhB"
                     /locus_tag="VHZ56_03885"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003530267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045252 - oxoglutarate dehydrogenase
                     complex [Evidence IEA];
                     GO_function: GO:0004149 - dihydrolipoyllysine-residue
                     succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HEX4297139.1"
                     /translation="MATDIRVPALGESVTEATIGQWFKKVGDTVAADEPVVELETDKV
                     TIEVPAPSAGVLAAISANAGDTVNVGALIGAIGEAAAAPAPKPAEAPKPVVAPPAPPK
                     AEAAPAPVRNGNGAMPPAPAAARLMNENGIAPEAVNGSGKRGQVLKEDVLAAMAKPAA
                     PVAQQASAASGSAAIERAAAVAEAPKVMQAAPAAAPAARPVAPPASPAPAPAPRAPVA
                     QADEAREERVRMTRLRATVARRLKDAQNSAAMLTTFNEVDMKPIMDLRGQYKELFEKK
                     HGVKLGFMGFFTLAVVHALKEIPNVNAEIDGDEIVYKNYAHIGVAVGTDRGLVVPVVR
                     DADKLGIAGVEKEINRLGKLARDGALSMADMQGGTFTISNGGVYGSLMST"
BASE COUNT          586 a         1105 c         1188 g          491 t
ORIGIN      
        1 ggcggcgcgc tgggggtcaa ggacatcgtc ctgggcatgg cgcatcgcgg ccggctgaac
       61 gtcctcaccc aggtgatgat gaagccgcat agagcgctgt tccacgagtt caagggcggc
      121 gcctattatt ccgaggacgt cgagggctcg ggcgacgtca agtaccacct cggtgcctcg
      181 tcggaccgcg agttcgacgg caactgggtg cacctcagcc tcaccgccaa cccgtcgcac
      241 ctcgagatcg tcgatccggt ggtgctgggc aaggcgcgcg ccaagcagga ccagcgttcg
      301 gcggtcgatg ggcattttgt gttcgacacc cggcagaccg accgctcggt ggtgctgccg
      361 ctgctgatcc atggcgacgc ggcgttcgcc ggccagggca tcatcgccga atgcctgggg
      421 ctttcaggcc tcaagggcca ccgcaccggc ggctcggtgc atttcgtcat caacaaccag
      481 atcggcttca ccacctcgcc gatcaattcg cggtcctcgc cgtatccgac cgacgtcgcc
      541 aagatgatcg aggcgccggt gttccacgtc aacggcgacg atccggaagc ggtggtgttc
      601 gtgtcgcggg tggcgaccga gttccgccag cgcttcggcc ggccggtggt ggtcgacatg
      661 ttctgctatc gccgcttcgg ccataacgag ggcgacgagc cgagtttcac gcagccgctg
      721 atgtactcca agatccggag ccacaagacg actttggaaa tctattccga acggctggtg
      781 ggcgagggcc tcgtcaccac cgaggacgtc gacaagctga aggccgactg gcgggccaag
      841 ctcgaatccg agttcgaggc cgggcaggat ttccggccga acaagaccga ctggctcgat
      901 ggccagtgga aggatctgaa gcgcgccgat gccgatgggc cgcggcgcgg cgacaccggc
      961 gtgccactcg aggagctgac cgcgatcggc acggcgatga cccgcgtgcc cgctggcttc
     1021 aacgtccaca agacggtccg gcggttcctc gacaaccggc tggcggcgat cgaatctggc
     1081 gagggcatcg actgggcgac cggcgagtcg ctggcgctcg gcacgctgct gaccgagggc
     1141 cattcggtgc gcctttccgg ccaggattcc gagcgcggca cgttcacgca gcgccactcg
     1201 gtgctgaccg accaggagac cggcgagacc tacacgccgc tcaacaacgt ggcgcccgac
     1261 cagcagcgct acgaggtcat caactcgatg ctgtcggaag aggcggtgct cggtttcgag
     1321 tacggctatt cgctggccga gccgaccacg ctgacgctgt gggaagccca gttcggcgac
     1381 ttcgccaacg gcgcgcaggt ggtgatcgac cagttcatca gctcgggcga gcgcaagtgg
     1441 ttccgcatgt cgggcctggt gatgctgctg ccgcacggct acgaggggca gggaccggaa
     1501 cacagttccg cccggctcga gcgctacctg cagctgtgcg cggaagacaa catgcaggtc
     1561 tgcaactgca cgacgccggc caactatttc cacgccctgc gccggcaggt gaagcgcgat
     1621 ttccgcaagc ccctgatcct gatgacgccg aagtcgctgc tgcgccacaa gcgggctacg
     1681 tcgacgctga gcgagatggg accggaaagc tgcttccacc ggctgctgtg ggacgacgcg
     1741 gaggcgccgg ggccgaagaa gacgacgatc cagctggtgc ccgacgagca gatccggcgc
     1801 gtggtgctgt gctcgggcaa ggtttactac gacctgctcg aggatcgcga gaagcgcggc
     1861 gtcaacgacg tctacctgct gcggctggag cagctctatc cgttcccggc caaggcgctg
     1921 ctcgacgagc tcaaccgctt caagaacgcc gaagtcgtct ggtgccagga agagcccaag
     1981 aacatgggcg gctggagctt cgtgcagccc tatgtcgact gggtgctgga gcagatgggc
     2041 cgcgccaacg accggccgcg ctatgtcggc cgggcggcgt ccgcctcgac cgcaaccggc
     2101 ctgatgcgca cgcatctggc gcaattgcag gcgttcctcg aagaggcgtt cgccaagtag
     2161 actgatcgtc gcacggccgg cccgaccggc cgtgttccac atttgggagt tcgactgaat
     2221 ggcaaccgac atccgggttc cggcgctggg cgaaagcgtc accgaggcga cgatcggaca
     2281 gtggttcaag aaggtgggcg acacggtcgc cgccgacgag ccggtggtcg agctcgaaac
     2341 cgacaaggtg acgatcgagg tgccggcgcc gtcggccggt gtgctcgccg cgatctcggc
     2401 caatgccggc gacacggtca atgtcggggc gctgatcggc gccatcggcg aggcggccgc
     2461 ggcccccgcg ccgaagccgg cggaggcccc gaagcctgtt gtggcgccgc cggcgccgcc
     2521 aaaggcggaa gcagccccgg cgccggtgcg caacggcaat ggcgccatgc cgccggctcc
     2581 ggccgcggcg cggctgatga acgaaaacgg catcgcgccc gaggccgtca atggcagcgg
     2641 caagcgcggc caggtgctga aggaagacgt gctggcggcg atggcgaagc cggccgcgcc
     2701 ggtggcgcag caggcgagtg ccgccagcgg gtcggccgcg atcgagcggg ccgccgccgt
     2761 cgccgaggcg ccgaaagtca tgcaggccgc gccggccgcg gcgcccgccg cccgtccggt
     2821 ggcgccgccc gcaagcccgg cgccggcccc ggctccccgt gcgccggtcg cccaggccga
     2881 cgaggcgcgc gaggagcggg tgcggatgac gcggctgcgc gccaccgtgg cgcgccggct
     2941 caaggatgcg cagaacagcg cggcgatgct caccaccttc aacgaggtgg acatgaagcc
     3001 gatcatggat ctgcgcggcc agtacaagga gctgttcgag aaaaagcacg gcgtgaagct
     3061 cgggttcatg ggctttttca cgctcgccgt ggtgcacgcg ctgaaggaaa tcccgaacgt
     3121 caacgccgag atcgacggcg acgagatcgt ctacaagaac tacgcccata tcggggtggc
     3181 cgtcggcacc gaccgcggcc tcgtggtgcc ggtggtgcgc gatgccgaca agctcggaat
     3241 cgccggggtc gagaaagaga tcaaccggct gggcaagctc gcccgcgacg gcgcgctgtc
     3301 gatggccgac atgcagggtg gcaccttcac catctcgaac ggcggcgtct acggctcgct
     3361 gatgtcgacg
//
LOCUS       DATAZA010000153         1786 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3845711, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000153 DATAZA010000000
VERSION     DATAZA010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1786
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3845711"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="VHZ56_03890"
     CDS             complement(<1..255)
                     /locus_tag="VHZ56_03890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297140.1"
                     /translation="MKLVARIIVALLVVVLVLYVGGMAYLYVEQRSFEYAPGDMVRTL
                     GETRLTTAEAVAIPTAGGAVINGWYEAPQPGEPIIVYYHGN"
     gene            complement(304..945)
                     /locus_tag="VHZ56_03895"
     CDS             complement(304..945)
                     /locus_tag="VHZ56_03895"
                     /inference="COORDINATES: protein motif:HMM:NF013488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family oxidoreductase"
                     /protein_id="HEX4297141.1"
                     /translation="MSRSLKVDLFTDIVCPWCLVGSARLDKAIAALPPDVEVEVENHP
                     FYLDPTTPAEGYDVGEMLKKKYGREPSEMWARVEGEARKSGIELDLSRQPRSFPTQKA
                     HTLIRLARAKGTQHALANAIAAAYFLEHRQVNDDAVLVEIATGFGFTREEALAGVNDP
                     RELAISHGLATDAAEQGIQGVPFFVFDNRFALSGAQPEEVFDMAFAKALEPAP"
     gene            complement(1247..>1786)
                     /locus_tag="VHZ56_03900"
     CDS             complement(1247..>1786)
                     /locus_tag="VHZ56_03900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018963905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEX4297142.1"
                     /translation="EETRPVKQGSAEDAAFMMKNASKVIIVPGYGMAVAQAQHAVREM
                     ADRLKAAGVEVKYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINSEFATADIAYV
                     IGANDVTNPAAKTDKTSPIYGMPVLNVEDAGTVLFVKRGMAAGYAGVQNELFFRDNTM
                     MLFGDAKKMTEDIVKSLAH"
BASE COUNT          287 a          630 c          558 g          311 t
ORIGIN      
        1 gttgccgtgg taatagacga tgatcggctc gcccggttgc ggcgcctcgt accagccgtt
       61 gatgacggcg ccgccggcgg tcgggatcgc caccgcctcg gcggtcgtca gcctggtctc
      121 gcccagcgtt cgcaccatat cgcccggcgc atactcgaag ctccgctgct caacatagag
      181 atacgccatc ccgcccacat agaggacgag gacaacaacg agcagtgcga cgatgatgcg
      241 ggcgacaagt ttcatggcgc gccaacgata caggtcgccg ccccggctgc ccacccgtct
      301 cggctagggc gctggctcca gcgccttggc gaaggccatg tcgaaaacct cctccggctg
      361 cgccccgctc aaggcgaagc ggttgtcgaa gacgaagaac ggcaccccct ggatgccctg
      421 ctctgccgcg tcggtcgcca gcccgtggct gatggcgagc tcgcgcgggt cgttgacgcc
      481 ggccagcgct tcctcgcggg taaagccgaa gcccgtcgcg atctccacca gcaccgcgtc
      541 gtcattgacc tgccggtgct cgaggaaata ggcagcggca atggcgttgg ccaatgcgtg
      601 ctgggtcccc ttggccctgg caagccggat cagggtgtgc gccttctgcg tcggaaagct
      661 gcgcggctgc ctgctgaggt cgagctcgat gcccgacttc ctcgcctcgc cctcgacccg
      721 ggcccacatc tcgctgggct cccggccata cttcttcttc agcatctcgc ccacgtcgta
      781 gccttcggcg ggcgtcgtcg ggtccagata gaacggatgg ttctcgacct cgacttcgac
      841 gtccggcggc agcgccgcga tcgccttgtc gagacgtgcc gatccgacca ggcaccacgg
      901 acagacgata tcggtgaaca ggtcgacttt gagcgaacgg gacatcggac ctccaggcga
      961 gcgcgggact gctcccgaca gatggcgcga accaccccgc gcgacaagca ggcacagcaa
     1021 tgtgtgtcag cccgcccgcc gacgaacgca tcgatcgctg cgaacgtcgc ctccggctgt
     1081 tcgatctgcg gcagatggcc ggctttcgcg atcagctcga accggccgtt cggcattgcc
     1141 gccgccagcg cccggccgta gccgcaatgc gatccggcgg cagcgtcggg gccgcccgaa
     1201 ggcagccccc ggaacccgtc attcggtcaa tccgctgcgc cggctctcag tgcgccagcg
     1261 acttgacgat atcttccgtc atcttcttgg catcgccgaa cagcatcatg gtgttgtcgc
     1321 ggaagaacag ctcgttctgc acgcccgcat agccggccgc catgccgcgc ttgacgaaca
     1381 gcaccgtgcc cgcatcctcc acgttgagca ccggcatgcc gtagatcggc gaggtcttgt
     1441 cggtcttggc cgcgggattg gtcacgtcgt tggcgccgat cacgtaggcg atgtcggcgg
     1501 tggcaaattc cgaattgatg tcctcgagct cgaacacctc gtcgtacggc acgttcgcct
     1561 cggcgagcag cacgttcatg tgccccggca tgcgaccggc aaccggatgg atcgcgtact
     1621 tgacctcgac gccggccgcc ttgagccggt cggccatctc gcgcaccgcg tgctgggcct
     1681 gcgccaccgc catgccgtag ccgggcacga tgatgacctt ggaggcgttc ttcatcatga
     1741 acgcggcgtc ttcggccgaa ccctgcttga ccggccgcgt ctcctc
//
LOCUS       DATAZA010000154         4809 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3498148, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000154 DATAZA010000000
VERSION     DATAZA010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4809
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3498148"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..254)
                     /locus_tag="VHZ56_03905"
     CDS             complement(<1..254)
                     /locus_tag="VHZ56_03905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297143.1"
                     /translation="MGVFTFQIVGAGRGGTSLVGGLVDAHPQCEVQFETFALRSLMGR
                     DDPPVRQNLRDRTVRRIARYAGACAAAAAGSAKPVWGHKTT"
     gene            complement(570..818)
                     /locus_tag="VHZ56_03910"
     CDS             complement(570..818)
                     /locus_tag="VHZ56_03910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1467 family protein"
                     /protein_id="HEX4297144.1"
                     /translation="MIVPATFVAIYFVVWWICLFLVLPFGVYNQVDAGEYVQGTERGA
                     PINPLWGRRVLWTTLLSIPVTGLLMWALTAPILASYWH"
     gene            complement(826..2499)
                     /locus_tag="VHZ56_03915"
     CDS             complement(826..2499)
                     /locus_tag="VHZ56_03915"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003531862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEX4297145.1"
                     /translation="MAELRDELVFVPLGGVGEIGMNMAAYGYGPPNARKWIVVDCGVT
                     FAGPAQPGIELIMADPSFLEDNADDVLALILTHSHEDHYGAVLDLWPAFDRPVYATAF
                     TAAMLSAKRASDNIVDNVTVRPMRVGSPFVLGPFTVEAINVAHSIPESCALAITTPIG
                     RVIHTGDWKLDPRPIAAPPTDEARFRALGAEGIPIALICDSTNALKDGESPSEDAVAA
                     TLAALIADAPHRVALTTFASNVGRVISIARAAQKAGRQVVMSGRALHRITAIARELGM
                     MEGLPPFLDQDAFKTLPRSQIVVLCTGSQGEPRAAIARIARGEHPAIDLNAGDRVIFS
                     SWAIPGNEREVIDIQNLLIDRGIEVITQRDGLVHTTGHPRREELKRLYDWVKPQTLVP
                     VHGEAAHLEAHAALGRQHGIPNVVHARNGDMIRLFPTLMQFPGEVRTGELYLDGNILC
                     TPEESGVKGRRRLSFGGHIAVSVCVDARGGIVSGPDIAIEGLPEVEDDEESLSRLVRN
                     TVSGALKSIPPKRRADPDVVDAALQRAVRGEVNAWWGKKPNVTVFVHRI"
     gene            complement(2500..3324)
                     /locus_tag="VHZ56_03920"
     CDS             complement(2500..3324)
                     /locus_tag="VHZ56_03920"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008125231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HEX4297146.1"
                     /translation="MAGFWLGPLASGRGYRLFGHDEVGSTNSEAARAAEVGDVGEAWF
                     AALKQTAGRGRRGRAWETPSGNLAASLLMVPDCEPAIAATLGFVAGVALNRALAATLP
                     AGLFRQGLDGAGAGVHHIALKWPNDVLADGEKLAGILLEAQKQPDGRHAIVIGFGVNI
                     VSAPSGLPYPATSLAGLGASISAETIFAALSDEWVVAYELWDNGRNVGDILRLWRASA
                     AGIGAEVAVSRDGGVVRGVFESIDDSGRLIVRANDNSRIAISAGDVHFGVTASVRG"
     gene            complement(3325..4770)
                     /gene="nuoN"
                     /locus_tag="VHZ56_03925"
     CDS             complement(3325..4770)
                     /gene="nuoN"
                     /locus_tag="VHZ56_03925"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006257261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HEX4297147.1"
                     /translation="MTSDLSSFAALAPAYPELLLAIGSVVLLLGGVIWSRERSTVPSF
                     LSIVLLVAVIAVALWQPATGILFNGGFIVDGFARYMKFLVLGGSAFTLILSTSTAKSF
                     GLDKFEYSILVLLATLGMMVMVSANDLMSLYVGLELQSLALYVVAALKRDDAKATEAG
                     LKYFVLGALSSGMLLYGASLVYGFTGMTQLDQIVGAITADHRSIGLIFGMVFLLAGLA
                     FKISAVPFHMWTPDVYEGAPTPVTAFFAAAPKVAAMALFIRVVTVPFGQITHDWQQIM
                     IFLSIASMVLAAFAAIGQNNLKRLLAYSSIGHVGFALVGLSAGTAVGVEGVEVYMAIY
                     IAMTIGIFAAILSLKTKDGFVETVPQMAGLAQKRPFIAAIIAIIMFSFIGLPPLAGFF
                     AKWQVFLAAIDAHLFVLAVVGVLASAVSAFYYLRIVKVMYFDEPVTEFAAAPAELTAV
                     MAVSGFLIVTYFVTVGSPLYAAAHSAAGSLF"
BASE COUNT          861 a         1665 c         1579 g          704 t
ORIGIN      
        1 gtcgtcttgt gcccccacac tggcttggca ctgccggctg ccgcggcggc gcaggcgccg
       61 gcgtaccgcg cgatccgccg gacggtccgg tccctgaggt tctggcgaac cggcggatcg
      121 tcgcgcccca tcagcgagcg gagggcaaag gtctcgaact gcacctcgca ctggggatgc
      181 gcgtccacca gcccgcccac caggctggtg ccgccccggc ccgcgccgac gatctggaac
      241 gtgaataccc ccatctagcg cccccggtcg gcagggcgca ccggaggcac cgggcaagcc
      301 ggaaacaacc cggcactcga agacacagtc gtccgcatga cgcgccaccc catcgggttg
      361 atcggtgcgc tgcgctcggg gctctagaag tatccgtctc ccgtcatgcg acaagacatg
      421 ccacggctat cgccgcaaat cgggcgacag ctgatgacgg cagacaaagg gtagtatcgg
      481 tagcgagcac gagcctgatg ccgcagcata accgacgatc gagtattgtc acgtcagaaa
      541 gtgcgacgcg tcacgccgcg aggcggagac tagtgccagt agctcgccag gatcggcgcc
      601 gtcagcgccc acatcagcag ccccgtcacc gggatcgaca gcagcgtcgt ccacagcacc
      661 cgccgtcccc agagggggtt gatcggcgcg ccgcgctcgg tgccctggac atattcgccg
      721 gcgtccacct ggttgtagac gccgaacggc agcaccagga acaggcatat ccaccagacg
      781 acgaaataga tggcaacaaa ggtggccgga acgatcatgg caccatcata tccggtggac
      841 gaaaaccgtc acattgggct ttttgcccca ccacgcattg acctcgcccc gcaccgcccg
      901 ctgcagcgcc gcatcgacca cgtccgggtc ggcccgccgc ttcggcggaa tcgacttgag
      961 cgcgccgctg acggtgttgc gcaccagccg gctgagcgat tcctcgtcgt cctccacctc
     1021 cggcaggcct tcgatggcga tgtccgggcc cgagacgatg ccgccgcgcg catcgacgca
     1081 gacgctgacc gcgatatgcc ctccgaagct gaggcgacgg cgtcccttca cgccgctttc
     1141 ctcgggcgtg cagaggatgt tgccgtcgag gtagagttcg ccggtccgca cttcgcccgg
     1201 aaactgcatc agcgtcggaa acagccggat catgtcgccg ttgcgggcat gaacgacgtt
     1261 cgggatgccg tgctgacggc cgagcgcggc gtgcgcctcg aggtgcgctg cctcgccgtg
     1321 aaccggcacc agtgtttgcg gctttaccca gtcgtagagc cgcttcaact cctcgcggcg
     1381 cggatggccg gtggtgtgca ccagcccgtc gcgctgggtg atgacctcga tgccgcgatc
     1441 gatcagcagg ttctggatgt cgatgacttc gcgctcgttg ccggggatgg cccaggacga
     1501 aaagatcacg cgatcgccgg cgttgaggtc gatcgccgga tgctcgccgc gcgcgatgcg
     1561 ggcgatggcg gcccgcggct cgccctggct gccggtgcaa agcaccacga tctggctgcg
     1621 cggcagcgtc ttgaatgcgt cctggtcgag gaacggcggc aggccctcca tcatccccag
     1681 ttcgcgggcg atggcggtaa tccgatgcag ggctcgaccc gacatcacca cttggcggcc
     1741 ggccttctgc gccgcccgcg cgatcgagat gacgcgtccg acattggacg cgaaggtggt
     1801 cagcgccacc cgatgcggcg catcggcgat cagcgccgcg agcgttgccg ctactgcgtc
     1861 ctcgctgggg ctctcgccgt ccttcagcgc attggtgctg tcgcagatga gtgcgatcgg
     1921 aatgccctcg gccccgagcg cccggaaccg cgcctcgtcg gtcggcggcg ccgcgatggg
     1981 gcgcggatcg agcttccagt cgccggtgtg gatgacgcgc ccgatcggcg tcgtgatcgc
     2041 cagcgcgcag ctctccggga tcgagtgcgc gacattgatc gcctcgacgg tgaacggccc
     2101 gaggacgaag ggcgagccca cccgcatcgg ccgcaccgtg acgttgtcga cgatgttgtc
     2161 cgacgcccgc ttggcgctga gcatggcagc cgtgaatgcc gtcgcataaa ccggccggtc
     2221 gaacgccggc cacaggtcga gcaccgcgcc gtagtggtcc tcgtggctgt gcgtgaggat
     2281 cagcgccagc acgtcgtcgg cgttgtcctc gagaaaactc ggatccgcca tgatcagctc
     2341 gatgccaggc tgcgccggcc cggcaaaggt caccccgcag tcgaccacga tccatttgcg
     2401 ggcgttcggc ggcccatagc cgtaggcggc catgttcatg ccgatttcgc cgacgccgcc
     2461 gagcggcacg aagaccagtt cgtcgcgtag ctcggccatc tagcccctca cactggcggt
     2521 gacgccgaaa tgcacgtcgc cggcgctgat ggcgatgcgc gaattgtcgt tggcccgcac
     2581 gatcagccgg ccgctgtcgt cgatcgactc gaacacgccg cgcaccacgc cgccgtcgcg
     2641 gctgaccgcg acttcggccc cgatgccggc ggccgaagcc cgccacagcc gcaggatgtc
     2701 cccgacgttg cggccattgt cccagagttc ataggcaacc acccattcgt cgctgagcgc
     2761 tgcaaagatc gtctcggcgc tgatcgacgc gccaagcccg gcgagcgagg tcgccggata
     2821 cggcagcccg ctcggcgccg acacgatgtt caccccgaag ccgatgacga tcgcgtgccg
     2881 cccgtcgggt tgcttttgtg cctcgagcag gatgccggcg agcttttcgc catccgccag
     2941 cacgtcgttc ggccatttga gcgcgatgtg gtgaacgccc gcgccggcgc catcgagccc
     3001 ctgccggaag aggccggccg gcagcgtcgc ggccagcgcc cggttgagcg cgacaccggc
     3061 aacgaaaccg agcgtcgccg caatcgccgg ctcgcagtcg ggcaccatca gcaggctggc
     3121 cgcaagattg ccggagggcg tctcccaggc gcggccgcgc cggcctcgcc cagccgtctg
     3181 cttcagggcc gcgaaccacg cctcgccgac atcgcccact tctgcggcgc gcgccgcctc
     3241 ggaattggtc gagccgacct cgtcatggcc aaacagcctg tacccccgcc cgctggcgag
     3301 cggcccgagc cagaacccgg ccaattaaaa caggcttccg gctgcactgt gcgcggcagc
     3361 gtagagtggt gaaccgacgg tcacgaaata ggtgacgatg aggaagcccg aaaccgccat
     3421 gaccgccgtg agctcggccg gcgcggcggc gaactccgtc accggctcgt cgaagtacat
     3481 caccttgacg atgcgcagat aatagaaggc gctcaccgcg ctcgccagca cgccgaccac
     3541 ggccaagacg aacaggtgcg cgtcgatcgc cgcgaggaac acctgccact tggcgaagaa
     3601 cccggcgagc ggcggcaggc cgatgaacga gaacatgatg atggcgatga tcgccgcgat
     3661 gaacggccgc ttctgcgcca gcccggccat ctgcgggaca gtctcgacga acccgtcctt
     3721 ggtcttgagc gacaggatgg cggcgaagat gccgatggtc atggcgatgt agatcgccat
     3781 gtagacctca acgccctcga cgccgacggc ggtcccggcg ctcagcccca ccagggcgaa
     3841 tccgacatgg ccgatcgacg aataggcgag gagccgcttg aggttgttct ggccgatcgc
     3901 cgcaaacgcc gccagcacca tcgaggcgat cgacaggaag atcatgatct gctgccagtc
     3961 gtgcgtgatc tgcccgaacg gcacggtgac gacgcggatg aacagcgcca tcgcggccac
     4021 cttcggcgct gccgcgaaga acgccgtcac cggcgtcggc gcgccctcgt agacatcggg
     4081 cgtccacatg tggaacggca ccgccgatat cttgaaggcg aggccggcca gcaggaacac
     4141 catgccgaag atcagcccga tcgagcggtg atcggcagtg atggcgccga cgatctggtc
     4201 gagctgcgtc atgccggtga agccgtagac cagcgacgca ccgtagagca gcatccccga
     4261 gctcagcgcc ccgaggacga agtatttgag ccccgcctcc gtcgccttgg cgtcgtcgcg
     4321 cttcagcgcc gccaccacgt agagcgcgag cgactgcagc tcgaggccga catagaggct
     4381 catcaggtcg ttggccgaga ccatgaccat catgcccagc gtcgccagca gcacgaggat
     4441 cgaatactcg aacttgtcga ggccgaagga tttggccgtc gaggtcgaca ggatgagcgt
     4501 gaaggccgag ccgcccagca ccaggaactt catgtagcgg gcaaagccgt cgacgatgaa
     4561 gccgccattg aacaggatgc ccgtcgccgg ctgccagagc gccaccgcga tcaccgccac
     4621 cagcaggacg atcgacagga acgacggcac cgtcgagcgt tcgcgcgacc agatgacgcc
     4681 gccgagcagc agcacgaccg agccgatggc gagcagcagc tccggatagg ccggagcgag
     4741 cgccgcaaag ctcgagaggt cggaagtcat gggcgtcgtc tcctagttcg ccgaggcgac
     4801 cagcgcggc
//
LOCUS       DATAZA010000155         3864 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2221190, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000155 DATAZA010000000
VERSION     DATAZA010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3864
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2221190"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1873
                     /gene="tkt"
                     /locus_tag="VHZ56_03930"
     CDS             <1..1873
                     /gene="tkt"
                     /locus_tag="VHZ56_03930"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003535989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX4297148.1"
                     /translation="ADVAVALFTKVMKFDPADPHWPDRDRFVLSAGHGSMLLYSALYL
                     LGYADMTIDQIKNFRQLESKTPGHPEHGFAMGVEATTGPLGQGIANGVGMALAEAHLA
                     AEFGKDIVDHHTWVLAGDGCLMEGISQEAIALAGHLQLKKLTIIWDNNHVTLDGKIED
                     EDSTDQLDRFRAVGWHTIAVDGHDQAAVEEALLAARAADQPTLIAARTTIGFGAPTKS
                     GTSKVHGSPLGAEELAGAKKALGITYPAFVVPNEIIDGWRKAGERGAPARAEWAARLA
                     KADAEKRAQFERRQKMDLPAGYAPALDAFKQKLAAEKPKLATRKASQNALEVINGVLP
                     GTLGGSADLTSSNFTNTSQTLPVLPGDFAGRYVRYGVREHAMAAAMNGIALHGGLLPY
                     GGTFLTFTDYARPAIRLSALMKQRVVYVMTHDSIGLGEDGPTHQPVEHLSSLRTIPDL
                     LVLRPADAMETLECWQIAIEHKDHPSILALSRQGLPALRTEYVKENLSARGAYVIAGD
                     KAADVAIFATGSEVSIAVEALKLLSAQKIAAKVISVPSMELFWKQPEDYRQSVIGKPR
                     ARVAIEAGVRMSWDRWLGDTGRFVGMHSFGASAPIEALYEYFGITAKGVVEAVTAQL"
     gene            1912..2919
                     /gene="gap"
                     /locus_tag="VHZ56_03935"
     CDS             1912..2919
                     /gene="gap"
                     /locus_tag="VHZ56_03935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003523203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEX4297149.1"
                     /translation="MATRVAINGFGRIGRNILRAVVESGRTDIEVVAANDLGPVETNA
                     HLLRYDSVHGKFPHEVTVTGDTIEAGGQRFKMTAVKDPSQLPHKELGVDIVLECTGIF
                     TTREKASAHLTAGAKKVIVSAPADGADYTIVYGVNDKGLKKEHVVISNGSCTTNCLAP
                     MALVMDQTFGIEKGMMTTIHSYTGDQPTLDTMHKDLYRARAAALSQIPTSTGAAKAIG
                     LVLPQLKGKLDGISIRVPTPNVSLVDLNFVAKRNTTAQEVNEALIAASEGPLKNIMTF
                     TRHPLVSSDLNHDPHSCTILLDQTKVIEGNFVTVFGWYDNEWGFSNRMCDVTAALAKT
                     L"
     gene            2949..>3864
                     /gene="pgk"
                     /locus_tag="VHZ56_03940"
     CDS             2949..>3864
                     /gene="pgk"
                     /locus_tag="VHZ56_03940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008128287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEX4297150.1"
                     /translation="MASLKTIAGMDFKGKRVLLRADLNVPVADGKVTDATRIERIVPT
                     IRAITKAGGKAILISHFGRPKGKVDKAFSLEQVVPAVADAVGHPVGFIDTDWVDVSNA
                     RRAIDSAPDGSILVLENTRFTPGEEANDPELAKRMASLGDIYVNDAFSAAHRAHASTE
                     GLAHLLPSAAGIAMEAELKALEAGLGNPKRPVVAVVGGAKVSSKIELLQNLVTKVDAL
                     VIGGAMANTFLLAEGIGVGKSLAERDMDDTVNAILDKAEKANCAIIVPVDGVVAWTFA
                     ANAPHQNYGLDAMDPEGMILDIGRQSIER"
BASE COUNT          725 a         1247 c         1323 g          569 t
ORIGIN      
        1 cgccgacgtc gccgtggcgc tgttcaccaa agtcatgaag ttcgatccgg ccgatccgca
       61 ctggccggac cgcgaccggt tcgtgctgag cgccgggcac ggctcgatgc tgctctactc
      121 ggcgctgtat ctgctcggct atgccgacat gacgatcgac cagatcaaga acttccggca
      181 gctggaatcg aagacgccgg ggcatcccga gcatggcttt gccatgggcg tcgaggcgac
      241 caccgggccg ctcgggcagg gcatcgccaa cggcgtcggc atggcgctgg cggaggcgca
      301 tctggcggcg gagttcggca aggacatcgt cgaccaccac acgtgggttc tggccggcga
      361 tggctgcctg atggagggca tcagccagga ggcgatcgcg ctggcggggc acctgcagct
      421 gaagaaactg acgatcatct gggacaacaa ccacgtgacc ctcgacggca agatcgagga
      481 cgaggattcg accgaccagc tcgaccggtt ccgcgccgtc ggctggcaca ccatcgccgt
      541 cgacggccac gaccaggcgg ccgtggaaga ggcattgctc gccgcccgcg cggccgacca
      601 gccgacgctg atcgcggcgc gtaccacgat cggtttcggg gcgccgacca agtcgggcac
      661 ctccaaggtg cacggctcgc cgctcggcgc cgaggaactg gcgggggcca agaaggcgct
      721 ggggatcacc tatccggcat tcgtggttcc gaacgagatc atcgacggct ggcgcaaggc
      781 cggcgagcgc ggcgccccgg cgcgggcgga atgggcggcg cggctggcca aggccgacgc
      841 ggaaaagcgg gcgcagttcg agcggcggca gaagatggac ctgccggcgg gctatgctcc
      901 ggcgctcgac gcgttcaagc agaagctcgc ggccgaaaag cccaagctcg ccacccgcaa
      961 ggccagccag aacgcactcg aagtgatcaa cggcgtgctg ccggggacgc tcggcggctc
     1021 ggccgatctc accagctcga acttcaccaa taccagccag acgctgccgg tgctgccggg
     1081 cgacttcgcc ggccgctacg tgcgctacgg ggtgcgcgag cacgccatgg ccgcggcgat
     1141 gaacggcatc gcgctgcacg gcgggctgct gccctatggc ggcacgttcc tgaccttcac
     1201 cgactatgcg cggccggcga tccggctgtc ggcgctgatg aagcagcggg tcgtctatgt
     1261 gatgacgcac gattcgatcg ggctcggcga agacgggccg acgcaccagc cggtcgagca
     1321 cctgtcgtcg ctgcgcacga tccccgacct gctggtgctg cggccggccg atgcaatgga
     1381 gacgctcgag tgctggcaga tcgccatcga gcacaaggac catccctcga tcctggcgct
     1441 cagccggcag ggactgccgg cgctgcgcac cgagtacgtg aaggagaacc tgtccgcccg
     1501 gggcgcctat gtcatcgccg gcgacaaggc tgccgatgtc gcgatcttcg ccacgggctc
     1561 ggaagtgtcg atcgcagtcg aggcgctgaa gctgctgagc gcgcagaaga tcgccgccaa
     1621 ggtgatctcg gtgccgtcga tggagctgtt ctggaagcag cccgaggact accggcagag
     1681 cgtcatcggc aagccgcggg cgcgggtcgc gatcgaagcc ggcgtgcgga tgagctggga
     1741 ccggtggctg ggcgacaccg gccggttcgt cggcatgcat tcgttcggtg cctcggcgcc
     1801 gatcgaggcg ctctacgagt acttcggcat caccgccaag ggcgtggttg aagccgtcac
     1861 cgcgcagttg taagacccgc gcgaaatcca ccgaattccc aaggagccag catggcaacc
     1921 cgcgtcgcaa tcaatggctt tggccgcatc gggcgcaaca tcctgcgcgc cgtcgtcgaa
     1981 tccggccgca ccgatatcga ggtggtcgcc gccaacgacc tcgggccggt ggaaaccaat
     2041 gcgcatctgc tccgctacga cagcgtgcac ggcaagttcc cgcatgaagt caccgtcacc
     2101 ggcgacacga tcgaggccgg tgggcagcgc ttcaagatga ctgcagtaaa ggacccgagc
     2161 cagctgccgc acaaggagct cggtgtcgac atcgtgctcg aatgcacggg cattttcacc
     2221 acccgggaaa aggcctcggc gcatctgacg gcgggtgcca agaaggtgat cgtctcggcg
     2281 ccggcggatg gggccgacta caccatcgtc tacggcgtca acgacaaggg cctgaagaag
     2341 gagcacgtgg tcatctcaaa cggctcgtgc accaccaatt gcctggcgcc gatggcgctg
     2401 gtgatggacc agacgttcgg catcgagaag gggatgatga cgaccatcca ttcctacacc
     2461 ggcgaccagc cgacgctcga caccatgcac aaggacctct accgggcccg cgccgcggcg
     2521 ctgagccaga tcccgacgtc gaccggggcg gcgaaggcga tcggcctggt gctgccgcag
     2581 ctaaagggca agctcgacgg catctcgatc cgcgtgccga ccccgaacgt gtcgctggtc
     2641 gatctcaatt tcgtcgccaa gcgcaacacg accgcgcagg aggtcaacga ggcgctgatc
     2701 gctgcctccg agggcccgct caagaacatc atgacgttta cgcgccatcc gctggtgtcg
     2761 agcgatctca accacgatcc gcattcgtgc acgatcctgc tggaccagac caaggtgatc
     2821 gagggcaatt tcgtcaccgt gttcggctgg tacgacaacg agtgggggtt ctcgaaccgc
     2881 atgtgcgacg tcaccgcggc actggcgaaa acgctgtagc ggcgttccac gcagcggaga
     2941 cgagcggaat ggccagcctc aagaccatcg cgggcatgga tttcaaaggc aagcgcgtgc
     3001 tgctgcgcgc cgacctcaac gtgcctgtcg ccgacggcaa ggtcaccgat gcgacgcgca
     3061 tcgagcgcat cgtgccgacc atcagggcga tcaccaaggc cggcggcaag gccatcctga
     3121 tcagccattt cggccggccg aagggcaagg tcgacaaggc gttttcgctc gagcaggtgg
     3181 taccggcggt ggcggatgcg gtcgggcatc cggtcggctt catcgacacc gactgggtcg
     3241 atgtgagcaa cgccaggcgt gccatcgact cggcaccgga cggatcgata ctggtgctcg
     3301 agaacacgcg cttcacgccg ggcgaggaag cgaacgatcc cgagctggca aagcgcatgg
     3361 cgtcgctggg cgacatctac gtcaacgacg cgttttcggc ggcgcatcgg gcgcatgcct
     3421 cgacggaagg gctggcgcac ctgctgccat cggcggcggg gatcgccatg gaggccgaac
     3481 taaaggcgct cgaggcgggg ctgggcaatc cgaagcggcc ggtggtggcc gtggtcgggg
     3541 gcgccaaggt gtcgagcaag atcgagttgc tgcagaacct cgttacaaag gtcgatgcgc
     3601 tggtgatcgg cggggcgatg gccaatacct tcctcctcgc cgagggcatc ggagtcggca
     3661 agtcgctggc cgagcgcgac atggacgaca ccgtcaacgc catcctcgac aaagccgaga
     3721 aggccaattg cgcgatcatc gtgccggtcg acggcgtggt ggcctggacc ttcgccgcga
     3781 acgcgccgca ccagaattac gggctcgatg cgatggaccc cgagggcatg atcctcgata
     3841 tcggcaggca atcgatcgag cgca
//
LOCUS       DATAZA010000156         2820 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3846035, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000156 DATAZA010000000
VERSION     DATAZA010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2820
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3846035"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1258
                     /locus_tag="VHZ56_03945"
     CDS             <1..1258
                     /locus_tag="VHZ56_03945"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HEX4297151.1"
                     /translation="EGRQMGSRRGAPTLPEPPYHLRGVDMIYLMARFDPAAIAPLVPE
                     GLTPSGTGWGTIAAYVVNQGWGIAPYTGFFICAELAGADSPDGSPGQYMHSGLYSAVG
                     GRVMREVYNSNFREGWTRLSRTGDAVVAEVGMGERPLATIRARVAGPALAQTGFSRYL
                     GRQPGGSGFTSYTVAFAAEMAPVEDQAVEFLPAAAEALGVMQPLEFTWTIATHDMAMT
                     FSPPRLLGDAPETLAEDARGAGLVRLFSSMGRPAAMVETSGRVVTLNLAAEALVRERR
                     LPLAGGTLDAALRPLLARAAQGGVEAVSEPMALDNREGSLPLIARAMPLDPSAAGPGR
                     LLVLFDDPIGAAAHDPVPALQLLGLTPAEARIASMVGAGLSPREAASKLDNSEGTVRT
                     ALSRIYDKLDIGRQGELARIVTRLGT"
     gene            complement(1627..2238)
                     /locus_tag="VHZ56_03950"
     CDS             complement(1627..2238)
                     /locus_tag="VHZ56_03950"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008125693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX4297152.1"
                     /translation="MTAMLLAERTPVDGRVLVLGAGGGLELNALAHAHPGWSFDGVDP
                     SADMLRLAEQSTRQHADRIRLHHGTIEKAPEGPFDAATSLLVFHFIARDQRLDTLRQL
                     HRRLKPGAPLVVAHISFAQTEPERSQWIARHVAFGAPDGADTAQLDASRRAIATRLSI
                     LAPEDEEAMLQEAGFSNITLFYVGLSFRGWVSYADSGRPPLAS"
     gene            complement(2447..>2820)
                     /locus_tag="VHZ56_03955"
     CDS             complement(2447..>2820)
                     /locus_tag="VHZ56_03955"
                     /inference="COORDINATES: protein motif:HMM:NF026183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HEX4297153.1"
                     /translation="GAAGSGAALKLLVNALLAIQVATIGELLGAAERLGLDRRRAGEV
                     IAGMPSCSASAKGVVMAMLARNFAPAFPVELVEKDLSYFASEAETDTLPMSTAARGVF
                     ERALSAGFASENMTAVAKLYD"
BASE COUNT          454 a          925 c          971 g          470 t
ORIGIN      
        1 agaaggccgg cagatggggt cgcggcgagg ggcgccgacg ttgcccgagc caccctatca
       61 cttgcgcggc gtcgacatga tctatctcat ggcccgcttt gatcccgccg ccatcgcgcc
      121 gctggtgcca gaagggctaa cgccgtccgg caccggctgg ggcactatcg ccgcctatgt
      181 cgtcaaccag ggctggggca tcgcgcccta taccggcttc ttcatctgcg ccgagctggc
      241 cggcgccgat tcccccgatg gctctcctgg ccagtacatg cattcgggac tctattccgc
      301 cgtcggaggc cgcgtcatgc gcgaggtcta caacagcaat tttcgcgagg gctggacgcg
      361 gttgagccgc accggcgacg ctgtcgtcgc agaggtcggc atgggcgagc gtccgttggc
      421 gacgatacgg gcgcgggtcg ccggccccgc gctggcccag acgggcttca gccgctacct
      481 cggcaggcag ccgggcgggt cgggcttcac ctcctacacg gtcgccttcg ctgccgagat
      541 ggcaccggtc gaggatcagg cggtggagtt cctgccagcg gccgccgagg cgctgggcgt
      601 aatgcagccg ctcgagttta cctggaccat cgccacgcac gacatggcga tgacattttc
      661 gccgccgcgc cttctgggcg acgcgcccga aacgctggcc gaggacgccc gtggagccgg
      721 gctggtgcgg ctcttctcga gcatgggtcg gccggcggca atggtcgaga ccagcggccg
      781 ggtggtcacg ctgaacctcg ccgctgaggc gctggtgcgg gagcgccggc tgccgcttgc
      841 gggcggcacg ctcgatgcgg cacttcgtcc gctgctggcg cgggccgcgc agggcggcgt
      901 cgaggctgtt tcggagccga tggcgctcga caaccgcgag ggcagcctgc ccctgatcgc
      961 acgcgccatg ccgctcgatc ccagcgccgc cggaccgggc cggttgctgg ttctattcga
     1021 cgatcccatt ggcgcggcgg cgcatgatcc tgtaccggcg ctccagcttc tggggctcac
     1081 gccggccgag gcgcgcatcg cgagcatggt tggcgccggc ctgtcgccgc gcgaggcggc
     1141 cagcaagctc gacaattccg aaggcacagt gcgcaccgca ctgagccgca tttacgataa
     1201 gctcgacatc ggtcggcagg gcgaactcgc gcgcatcgtc acgcggctgg gcacctgaac
     1261 caccgacacg ctttatcaat ccgcccgtgg ggcggcttgc ctcaactgcc cgtagctctc
     1321 aggctgggat atggcggccc agaggtggat cgcgagcgtg gacaaaagct cctcggttcc
     1381 ggtggaagcc ggcgccgatg gagccaggtg ccggcaagat cgatctcttt gatccgcgcg
     1441 agtgatttgt ggtcgtgttg cgttcccgct gctgccgcga agcgcgaaca cgtagacttg
     1501 tgtcgctggt gttccgcggc ctacgtgcca cgaatatggg ggtgagcgaa aactccgggt
     1561 ttggtgggcc tgagcttcca agacggaaac ggtgaatgta ccccgaatat cgcagttaca
     1621 atacgcctag ctggccagag gcggtcggcc cgagtccgcg taggacaccc atcctcggaa
     1681 gctgaggcca acgtagaaca gggttatgtt cgagaagcct gcctcttgca gcatggcctc
     1741 ttcgtcctct ggcgcgagga tggagagccg ggtggcaatg gcgcgccgcg atgcgtccaa
     1801 ctgtgcggtg tctgctccgt cgggggcgcc gaaggccaca tgtcgcgcga tccattgtga
     1861 tcgttcgggc tcggtctgcg caaaactgat gtgggcgacg accaagggag cgcctggctt
     1921 gaggcgacgg tgaagctgcc tcagggtatc gaggcgctga tcgcgagcaa tgaagtggaa
     1981 cacgaggagc gatgtggcgg catcgaacgg accctccggc gctttctcga tggtgccgtg
     2041 atgcagccga atgcgatctg catgctggcg tgtcgattgc tcggccaatc gcagcatgtc
     2101 ggcagacggg tcgacgccgt cgaacgacca gccaggatgg gcgtgcgcga gcgcgttgag
     2161 ctcgagcccg cctcccgcgc ccagcaccag cacccggcca tcgacaggcg tccgctccgc
     2221 cagcagcata gccgtcatcc tatgcagggc cagaaatccg ggcacctgcc gaggcgggcc
     2281 ctcggcgtag gtgttggcgg cgtttgccga aaatgaggac ggttgcacgt gctgctccaa
     2341 tgcggtcccg ggcggtgatg acgggcaagc gccggaacgt caagaacgag gcctggaggc
     2401 cccacaagcc gacttcggcg cctgtcatcg agaaccgcgc gcgggtctag tcgtacagct
     2461 tggcgaccgc cgtcatgttc tcactggcga agccggccga cagggcgcgc tcgaacacgc
     2521 cacgcgccgc cgtgctcatg ggcagggtat cggtctcggc ctccgatgcg aaatagctga
     2581 ggtctttctc cacgagttcc accgggaagg caggcgcaaa attccgagcc agcatggcca
     2641 tcactacgcc cttggccgac gcactgcacg agggcatccc ggcgatgact tcacccgcgc
     2701 gcctgcgatc gaggcccagt cgctcggccg cgccgagtaa ctctccgatc gtcgccacct
     2761 gaatggccag cagggcgttg acgagcagct tcagtgctgc gcccgagccg gccgccccga
//
LOCUS       DATAZA010000157         6536 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_248810, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000157 DATAZA010000000
VERSION     DATAZA010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6536
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_248810"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(27..1067)
                     /locus_tag="VHZ56_03960"
     CDS             complement(27..1067)
                     /locus_tag="VHZ56_03960"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like serine protease"
                     /protein_id="HEX4297154.1"
                     /translation="MRFRRLTVVAATVTCAVLVAAPVLAANSTPGSKGEAGASRAAPA
                     TIPGTAKPLPVPSADPANASRGIFGADEAAALASMGTVTLNSDGSVDEQPASASLRSL
                     VSDEVKGKDNSGTTPRYVPPPDTRTQITDASAYPDDTVGWLWVQDQKGGWATCTATLI
                     GPQSVITAAHCVYDHETGGWVKSITFYPGITDGKTAPEGSYDYQSAHILKGFIDNYDG
                     KNYDSVMPWDLAEITLKSDAGNQIGWMGFEVDDSSPWHATIVGYPGDKPDGTMWQSEC
                     DIPANPTPISNFSHVCATYAGSSGSSMWQDAGGGDLYIRGINVAENLGMKLNFGTRLI
                     DSYYQFLLDNYK"
     gene            1230..2252
                     /locus_tag="VHZ56_03965"
     CDS             1230..2252
                     /locus_tag="VHZ56_03965"
                     /inference="COORDINATES: protein motif:HMM:NF012742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX4297155.1"
                     /translation="MNDSSKSAGRPVRVEDVAREAGVSPITVSRALSSPDKVRPETRA
                     RVAEAVARTGYVVNSIASSLRSGRSSIVTVFAANLQNPHFAGAMQGALDAFEGSRFHL
                     MFAQTGDAEELGASVIESTLPFRPAGVIFTGLVGNEQTRAVLTRLGVPLVEMWGNADN
                     PIDMMVGSSGFAGGRLMGEHFGAQGFRRIAYCGNTRERGNERLEGFIAGLAEHGAAPA
                     LVLPRSGTRSFSEGMAAVDEVLAALPDCDAMFFGTDLLAVGAVLRARHLGIEVPGQLA
                     LAGYGDLEFAEHIDPPLTSVHASDYQLGRHAGGMLLKRLTGQAVPELVIQVPVSLEVR
                     ASTLRN"
     gene            2347..4155
                     /locus_tag="VHZ56_03970"
     CDS             2347..4155
                     /locus_tag="VHZ56_03970"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004438887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IlvD/Edd family dehydratase"
                     /protein_id="HEX4297156.1"
                     /translation="MTTTKDGVSDKRLRSRAWFDNPDNPDMTALYLERYLNFGLSREE
                     LQSGKPIIGIAQTGSDLSPCNRHHIVLAQRVREGIREAGGIAIEFPVHPIQETGKRPT
                     AGLDRNLAYLSLVEVLYGYPLDGVVLTIGCDKTTPAMLMGAATVNIPAIALSVGPMLN
                     GYFKGERTGSGTIVWKARQMMAAGEIDYKGFVDLVASSAPSTGYCNTMGTASTMNSLA
                     EALGMQLPGSAAIPAPYRDRQEMAYRTGLRIVDMVKEDLKPSDILTHDSFVNAIVVNS
                     AIGGSTNAPIHIQAIARHIGVELSLDDFQTYGHKVPLLVNLQPAGEYLGEDYYHAGGV
                     PAVVNELMGQGLIRENAPTVNGKTIGENCAGTPIQDDKVIRKFSNPLKTDAGFLVLRG
                     NLFDNAIMKTSVISPEFFDRYLNDAQHPGMFEGKAVVFDGPEDYHHRIDDPALAIDEH
                     TMLFMRGAGPIGYPGSAEVVNMRPPDYLIKKGITALPCIGDGRQSGTSGSPSILNASP
                     EAAAGGNLAILRTGDRVRIDLNKGSADILISAEELKTRRDDLASMGGYKYPKNQTPWQ
                     EIQRGIVDQLGDGAVLKPAVKYQRIAQTSGIPRDNH"
     gene            4260..4727
                     /locus_tag="VHZ56_03975"
     CDS             4260..4727
                     /locus_tag="VHZ56_03975"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX4297157.1"
                     /translation="MADILQYCKDRKAETFESGAVLIEEGGTDHKLFVLVEGQVEVLR
                     KDTQVSYIDEPGSLFGEMSVLLDMPYSATVKALSSVKAYVIEDPIGFLSSQAEIAVEM
                     ATLLARRLYYTTSYLVDLQQQAAGRREDLDLVDTILAQLVQTPDTPKPKTRKK"
     gene            complement(4732..5118)
                     /locus_tag="VHZ56_03980"
     CDS             complement(4732..5118)
                     /locus_tag="VHZ56_03980"
                     /inference="COORDINATES: protein motif:HMM:NF023178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3307 domain-containing protein"
                     /protein_id="HEX4297158.1"
                     /translation="MTAVFFGLLIGLEIKHYIADYFMQPGWMLGGKGDFRQPGGYAHA
                     AIHAAFSFIVLVVMGTPLWLAATLFVAEFVVHYGLDYAKIHYSTGVHVDSQPRRFWAL
                     HGIDQLTHQLTYAAMIFIVLRARGLA"
     gene            5324..6082
                     /locus_tag="VHZ56_03985"
     CDS             5324..6082
                     /locus_tag="VHZ56_03985"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HEX4297159.1"
                     /translation="MRKLVSGIVAAMLLAALSGIALADNPAGSAKGVNPAADAAAGGA
                     NRTLVVGSDVFIGDVVETGPKGQVQILFADDTELVVGPRSTLKIEDYLLRNNGSAGKL
                     AVDMLSGAFRFVTGDSAKNRYQIDTPTGTIGVRGTGFDVFVGADGATSILLYHGAVQF
                     CSLSKVCQVISNYCDVGHYDHSDAQVLGDSRLSRGDLRNTLKGEFIYAMNQSPLLRQF
                     WIATAYDCLHNAPTVPPQPPRQSDQPPPPKRVAS"
     gene            6123..>6536
                     /locus_tag="VHZ56_03990"
     CDS             6123..>6536
                     /locus_tag="VHZ56_03990"
                     /inference="COORDINATES: protein motif:HMM:NF017076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE2 domain-containing protein"
                     /protein_id="HEX4297160.1"
                     /translation="MTTRRLLPTLLGLALVLLLALLRVADPLPMSTIRDMGFDLEQRL
                     KPRTAFDSPVRVIDIDEASLKILGQWPWPRTVFATLNDRLAELGAAAIGYDVLFPEAD
                     RLSADNDAAFAKSLGHTNSVLGFSLSPGAPPLSEVP"
BASE COUNT         1134 a         2095 c         2238 g         1069 t
ORIGIN      
        1 ttgtgccccg ggcggcagcg ggccggctat ttgtagttgt cgagcaggaa ctggtagtag
       61 ctgtcgatca ggcgggtgcc gaaattgagc ttcatgccga ggttttcggc gacgttgatg
      121 ccgcggatgt agaggtcgcc accgcccgca tcctgccaca tggagctgcc cgacgagccg
      181 gcgtaggtgg cgcagacgtg cgagaaattg ctgatcgggg tcgggttggc ggggatgtcg
      241 cactcggact gccacatggt cccgtccggc ttgtcgccgg gataaccgac gatggtggcg
      301 tgccagggcg agctgtcgtc gacttcgaag cccatccagc cgatctggtt gccggcgtcg
      361 gatttgaggg tgatctcggc gagatcccac ggcatcaccg aatcgtagtt cttgccgtcg
      421 tagttgtcga tgaagccctt gaggatgtgg gcgctctggt agtcgtagga gccctcgggc
      481 gcggtcttgc cgtcggtgat gccgggatag aaggtgatcg acttcaccca gccgccggtc
      541 tcgtggtcgt agacgcagtg ggcggcggtg atgacgctct gcgggccgat caaggtggcg
      601 gtgcaggttg cccagccgcc cttctggtcc tggacccaga gccagccgac ggtgtcgtcg
      661 ggataggcgc tggcgtcggt gatctgggtg cgcgtgtcgg gcggcggtac atagcgcggc
      721 gtcgtgccgg aattgtcctt gcccttcact tcgtcggaga ccagcgaccg caggctggcg
      781 gaagccggct gctcgtcgac cgaaccgtcg ctgttgaggg taacggttcc catgctggcg
      841 agggccgccg cctcgtcggc gccgaagatg ccgcggctgg cgttggccgg atcggccgac
      901 ggcacgggga gcggcttggc ggtgcccggt atggtggctg gtgcggcgcg gctggcgccg
      961 gcctcgccct tgctgccggg cgtggaattg gcagcgagca ccggcgcggc gacaagcacc
     1021 gcgcaagtca cggtggcggc aacaacagtc aatcggcgaa aacgcatgat catccctcga
     1081 aaaccccagg cggagagaac cgggaaagct gaactacgtc aaccatttcc tgtctctcgg
     1141 ccggcagcac tggaaggctg cgaccggtcg cgctatttcg cttgccgacc gatcttgcta
     1201 gtttccccgc catattttgg ggggttgcat tgaacgattc cagcaagagc gcgggccgtc
     1261 cggtccgcgt cgaagatgtt gcacgtgaag cgggagtctc cccgatcacc gtgtcgcggg
     1321 cgctgagttc acccgacaag gtgcgtcccg agacccgggc gcgggtggcc gaggcggtgg
     1381 cgcgcaccgg ctacgtcgtc aattccatcg cctccagcct caggtcgggg cgctcgtcca
     1441 tcgtcacggt gttcgcggcc aacctgcaga acccgcattt cgccggcgcg atgcagggag
     1501 cgctcgacgc gttcgaaggc agccgcttcc acctgatgtt cgcgcaaacc ggggatgccg
     1561 aggagctggg cgcgtcggtg atcgaatcga cgctgccgtt ccggccggcg ggagtgatct
     1621 tcaccggcct cgtgggcaac gagcagacgc gcgcggtgct gacccggctc ggcgtgccgc
     1681 tggtcgaaat gtggggcaat gccgacaatc cgatcgacat gatggtgggg tcgtcggggt
     1741 ttgccggtgg gcgactgatg ggcgagcatt tcggcgccca gggcttccgc cggatcgcct
     1801 attgcggcaa cacccgcgaa cgcggcaacg agcggctcga gggcttcatc gcgggactgg
     1861 cggagcacgg agcggccccg gccctggtgc tgccgcgctc cggaacccgc agtttttccg
     1921 agggcatggc agcagtcgac gaagtcctgg cggcgctccc cgactgcgac gcgatgtttt
     1981 tcggcaccga cctgctggcg gtgggagcgg tgctgcgggc ccggcacctg ggcatcgagg
     2041 tgccggggca actggctctg gcgggctatg gcgacctcga attcgccgag cacatcgacc
     2101 cgccgctgac ctcggtgcac gcgtccgact atcagctcgg acggcacgcc ggcggcatgc
     2161 tgctgaagcg gctcacgggc caagccgtgc cggagcttgt catacaggta ccggtcagcc
     2221 tcgaggtgcg ggccagcacg ctgcgcaatt agcgcaaaaa ccgaacggca agcgcaggaa
     2281 tgatctctca ttcgcgccgc ggatgcgata tgccagcgcg aacggtttct gatccgaggc
     2341 gaggcaatga cgacgacgaa ggatggggtg tcagacaagc ggctcaggtc gcgggcgtgg
     2401 ttcgacaatc ccgacaaccc ggacatgacg gcgctgtacc tggagcgcta cctcaatttc
     2461 ggcctcagcc gggaagagct gcaatcgggc aagccgatca tcggcatcgc gcagacgggt
     2521 tccgaccttt ccccctgcaa ccgccaccac atcgtgttgg cgcagcgggt gcgcgagggc
     2581 atccgcgagg cgggcggcat cgccatcgaa ttcccggtgc atccgatcca ggagacgggc
     2641 aagcgcccga cggcggggct cgaccgcaac ctcgcctatc tgagcctcgt cgaagtgctc
     2701 tacggctatc cgctcgacgg cgtggtgctg accatcggct gcgacaagac cacgccggcc
     2761 atgctgatgg gggccgcgac ggtcaacatc ccggcgatcg cgctcagcgt cgggccgatg
     2821 ctcaacggct atttcaaggg cgagcgcacc ggctcgggca ccatcgtgtg gaaggcccgg
     2881 cagatgatgg cggccggcga gatcgactac aaaggcttcg tcgacctcgt cgcgtcgtcg
     2941 gcaccctcga ccggctattg caacaccatg ggcacggcgt cgacgatgaa ctcgctggcc
     3001 gaggcgctcg gcatgcagct gcccggttcg gcggcgatcc cggcgcccta ccgcgaccgg
     3061 caggaaatgg cgtaccgcac cgggctgcgg atcgtcgaca tggtgaagga ggacctgaag
     3121 ccctccgaca tcctgacgca cgacagtttc gtcaacgcca tcgtcgtcaa ctcggcgatc
     3181 ggcggctcga ccaacgcgcc gatccacatc caggcgatcg cccggcacat cggggtcgag
     3241 ctgtcgctcg acgacttcca gacttacggc cacaaggtgc cgctgctggt caacctgcag
     3301 ccggccggcg agtacctcgg cgaggactat taccacgcgg gcggggtgcc ggcggtggtc
     3361 aacgaattga tgggacaggg cctcatccgc gagaatgcgc cgacggtcaa cggcaagacg
     3421 atcggcgaga actgcgccgg aacgccgatc caggacgaca aggtcatccg gaaattctcc
     3481 aatccgctga agaccgatgc gggcttcctc gtgctgcgcg gcaacctgtt cgacaacgcc
     3541 atcatgaaga ccagcgtcat cagcccggag ttcttcgacc gctatctcaa cgatgcccag
     3601 catccgggga tgttcgaggg caaggcggtg gtgttcgacg ggccggagga ctaccaccac
     3661 cggatcgacg atccggcgct cgcgatcgac gagcacacca tgctgttcat gcgcggcgcc
     3721 gggccgatcg gctatccggg ctcggccgag gtggtcaaca tgcggccacc ggactacctc
     3781 atcaagaagg ggatcacggc gctgccctgc atcggcgatg gccggcagtc gggaacgtcg
     3841 ggctcgccct cgatcctcaa cgcctcgccg gaagcggcgg ccggcggcaa tcttgcgatc
     3901 cttcgcaccg gtgaccgggt gcggatcgac ctcaacaagg gcagcgccga catcctgatc
     3961 tccgccgagg agctcaagac gcggcgcgac gacctcgcct cgatgggcgg ctacaaatat
     4021 cccaagaacc agacgccgtg gcaggagatc cagcgcggca tcgtcgacca gctcggcgac
     4081 ggcgcggtgc tgaagccggc ggtgaaatac cagcgcatcg cccagacctc ggggattccg
     4141 cgcgacaacc attgagggcc acaggccggg cgtgacgcgt ccggcctgcc gctgcccgca
     4201 attgcgccgc aaaacccttt gctttatctc ccgggtggcg ctgaccgagc gaggggccga
     4261 tggctgacat tctccagtac tgcaaggatc gcaaggccga gaccttcgag tcgggcgccg
     4321 tgctgatcga ggaaggcggc accgaccaca agctgttcgt cctggtcgaa ggccaggtcg
     4381 aggtgctgcg caaggacacc caggtcagct acatcgacga gccgggctcg ctgttcggcg
     4441 aaatgagcgt cctgctcgac atgccgtatt cggcgacggt caaggcgctg tcgagcgtca
     4501 aggcgtatgt gatcgaagat ccgatcgggt tcctgtcgag ccaggccgag attgccgtcg
     4561 agatggcaac gctcctggcg cggcggctct actacaccac gtcctacctg gtcgacctgc
     4621 agcagcaggc ggcaggccgg cgcgaggatc tcgatctcgt cgacaccatt ctcgcgcaac
     4681 tggtgcagac gccggacacg ccaaagccga agacgcgcaa gaaatagcgc ctcaggcgag
     4741 gccgcgggcc cgcagcacga tgaagatcat cgccgcgtag gtcagctggt gcgtcagctg
     4801 gtcgataccg tgcagcgccc agaagcgccg cggctggctg tcgacgtgga cgcccgtcga
     4861 atagtggatc ttggcgtagt cgaggccgta gtggacgacg aactcggcga cgaacaatgt
     4921 cgccgccagc caaagcggcg ttcccatgac cacgagcacg atgaacgaaa aggccgcatg
     4981 gatggcggca tgggcgtagc cgccaggctg gcggaaatcg cccttgccgc ccagcatcca
     5041 gccgggctgc atgaaatagt cggcgatata gtgcttgatt tcgaggccga tcagcaggcc
     5101 aaagaaaacc gcggtcattc cgatctccgg ccccccagcc gaagccggaa cgtggcatcg
     5161 ctccggtcgt cccctacgcc ggcgaagctt gccgcatgcc gccgatccgc gcaagcgtcg
     5221 aagatttggc gcaatgcctg ctagaatggt atatcgttca ggggcggttc agcagacatg
     5281 tgcaatgcgg gcgcggcggt gcccgccaga cgagggtcga gtcatgcgca agctggtttc
     5341 aggcatagtg gcggcaatgt tgcttgccgc actttcgggc atcgcgctcg ccgataatcc
     5401 ggcgggaagt gccaagggcg tcaatccggc ggccgatgcg gcggcgggcg gagcgaaccg
     5461 cacgctggtg gtgggctccg atgtgttcat cggcgacgtc gtcgagaccg ggcccaaggg
     5521 ccaggtgcag atcctgttcg ccgacgacac cgaactggtg gtggggccgc gctcgacgct
     5581 gaagatcgag gattacctgc tgcgcaacaa tggctcggcg ggcaagctgg cggtcgacat
     5641 gctgtcgggc gccttccgct tcgtcaccgg cgattccgcc aagaaccgct accagatcga
     5701 tacccccacc ggcaccatcg gggtgcgcgg caccggcttc gacgtgttcg tcggcgcgga
     5761 cggggcgacg agcatcctgc tctaccacgg tgccgtgcag ttctgctcgc tgagcaaggt
     5821 ctgccaggtg atctcgaact attgcgacgt cggccactac gaccatagcg atgcgcaggt
     5881 gctgggcgac agccggctga gccgcggcga tttgcgcaac acgctgaagg gcgagttcat
     5941 ctacgcgatg aaccagtcgc cgctgctgcg ccagttctgg atcgcgacgg cgtatgactg
     6001 cctgcacaat gcgccgacgg tgccgccgca gccgccgcgg cagagcgacc agccgccacc
     6061 gccaaagcga gtggctagct agatcgtcgc cagatgccgg tccctgccgc tgacagtggc
     6121 tcatgaccac ccgacggctg ctgccaaccc tgctcgggct ggcactggtg ctgctgctgg
     6181 cgctgctgcg ggtcgccgat ccgctgccga tgtcgacgat ccgcgacatg ggcttcgacc
     6241 tcgagcagcg gctgaagccg cgcaccgcct tcgacagtcc ggtgcgggtc atcgacatcg
     6301 acgaggcgtc gctgaagatc ctcgggcagt ggccgtggcc gcgcaccgtg ttcgcaacgc
     6361 tcaacgaccg gctggccgag ctcggtgccg cggcaatcgg ctacgacgtg ctgttcccgg
     6421 aggcggaccg gctctcggcc gacaatgacg cagcgttcgc caaatcgctc ggccacacca
     6481 attcggtgct cgggttctcg ctttcgccgg gcgcgccgcc gctgagcgaa gtgccc
//
LOCUS       DATAZA010000158         6422 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_596722, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000158 DATAZA010000000
VERSION     DATAZA010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6422
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_596722"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..795)
                     /locus_tag="VHZ56_03995"
     CDS             complement(<1..795)
                     /locus_tag="VHZ56_03995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4297161.1"
                     /translation="MTTEALSADIPRTAVAPSDPANAARNGLVINLLLVSAFVVMLNE
                     TIMNVAIPTIRDTFGTTPSAAQWLSTAFLLTMAVVIPVTGFLLQRLSTRTIYMLAMAL
                     FSTGTALAMFAPSLELLVACRVIQASGTAVMMPLLMTTVMTLVPPQNRGRMMGNISVV
                     MSLAPAAGPVVSGIILSYLHAWQYLFALVLPIALLALFLGWRRMVNVTTPHKASLDVV
                     SVVISAFAFGGVVYGLSGLGTVDANADQTATWIALGVGVVAMAVFIW"
     gene            complement(1121..1699)
                     /locus_tag="VHZ56_04000"
     CDS             complement(1121..1699)
                     /locus_tag="VHZ56_04000"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HEX4297162.1"
                     /translation="MARKIIVTQYASIDGVIEDPVGMEGSGLGAWVEPYHRGPAGDAF
                     KISELANAGAMIYGRRTYEGFAAVWPEVNDPDGYATRMNSLPKYVASRTLKAVEWSNS
                     QLIEGDLIAAARAIKAQPGGDILIFGSASVVHELLPAGLIDEVRIMTYPVLLGRGIRW
                     FPEGSRVALKLLEIRSFEDGITLTRYATDGTP"
     gene            complement(1807..2292)
                     /locus_tag="VHZ56_04005"
     CDS             complement(1807..2292)
                     /locus_tag="VHZ56_04005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012252833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX4297163.1"
                     /translation="MSADDHDQPPRWKHDGVQVIAGDRLDPNTAQTPGMFRQAAINAA
                     RVGAQKLWAGTVRIDANARTGVHHHGPLESVIYVVSGHARMRWGEHLEFVAEAWPGDF
                     IYVPPFVPHQEINADPGEPLQCVLVRSDNEAVVVNLPEIAAVEPPEDVYWVDPVHKAP
                     R"
     gene            complement(2289..2948)
                     /locus_tag="VHZ56_04010"
     CDS             complement(2289..2948)
                     /locus_tag="VHZ56_04010"
                     /inference="COORDINATES: protein motif:HMM:NF024852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding oxidoreductase"
                     /protein_id="HEX4297164.1"
                     /translation="MRIVVIGGSGRTGKRLVGQLVAAGDSVVATIRNPKKMAEMVKLG
                     AETVILDLEHSSGPDFAAQFKGADAIVFAAGSSTGESSALDRAGLVKTVRAAKSAGVK
                     RYVAIASIGASTGMKLTGDWASDEMKDYYKQKRAANAHLRASGLSWTILEPGELTDAK
                     GTGKVTLSEAAIETGAVPRADVAAVLVALLHEPRTAGRAFQLTAGKSLIATALKRALE
                     K"
     gene            complement(2958..3866)
                     /locus_tag="VHZ56_04015"
     CDS             complement(2958..3866)
                     /locus_tag="VHZ56_04015"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA family NAD(P)-binding protein"
                     /protein_id="HEX4297165.1"
                     /translation="MASIAIAGATGRLGQLIAGALRERGATVRALVRPGTAPERLRGL
                     SGAAIVEADYSDPASLNRALAGTDVVVSALNGLRDIIVTAQAALLDAAVANRVGRFIP
                     SDYAADIFRLAAGENRNFDLRREFRTGHLQQAPIASTSILVGGFMELLLRGRMIDFAA
                     HAVNYWGSPEQPLDYTTMADTARIAAAVALDPHAPDILRISGDRITARQVAAAAGEVL
                     GTPFALNRLGSVEELAALIAGERAAHPEAESEVFPRFQQLQYTHNMQSGRGTLEPLDP
                     PRYDLKLTTVRQLLAANAAQLRAPQP"
     gene            complement(4040..4318)
                     /locus_tag="VHZ56_04020"
     CDS             complement(4040..4318)
                     /locus_tag="VHZ56_04020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017996574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297166.1"
                     /translation="MRQVVLMLFAAALGFGGVYAYAQTGQGGAPVAGTVAAACVIKGN
                     ISIPSGERIYHMPGQHYYTATIITPEKGERWFCSEADAVAAGWRKAGD"
     gene            complement(4490..5038)
                     /locus_tag="VHZ56_04025"
     CDS             complement(4490..5038)
                     /locus_tag="VHZ56_04025"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HEX4297167.1"
                     /translation="MRKLTAGLFHSVDGVVEAPFKFQFDAFDEALGAELGEVMGRTDA
                     VLLGRVGYEEWGAFWPTAQRDEGFATFINGVPKHVASRTLKGPLAWSNATLIEGDVLD
                     FVRRLKQQPGKEIAVMGGISLVRQLLFAGLLDELTLITHPVVAGSGRHLFEPSDPTTR
                     LALVRERRTPKGNVVATYGLGG"
     gene            complement(5213..6109)
                     /locus_tag="VHZ56_04030"
     CDS             complement(5213..6109)
                     /locus_tag="VHZ56_04030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006331864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX4297168.1"
                     /translation="MPRATIADLVAFVTVAGERSFTRAAARLGVSPSALSHTIRRLEE
                     RLGLRVLARTTRSVSLTEAGERLMRTVAPRLSEIDAEIEALSALRDRPAGSIRITATD
                     YAADVIVWPRLRSFLTDYPDIKVEIFLDPGLTDIVRQRFDAGVRSGEQVARDMIAVRI
                     SADWRMAVVGSPDYFRDRKRPKSPVDLSAHTCINLRLNTSGGLYAWELQKAGRQVNVR
                     VDGQLTFNSTSQILTAALAGFGLAHIPEDLVRPHIAAGRLVPILEDWWPTYPGYHLYY
                     PSRRQLSPAFSLLVEALRHRGH"
     gene            6258..>6422
                     /locus_tag="VHZ56_04035"
     CDS             6258..>6422
                     /locus_tag="VHZ56_04035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019859639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX4297169.1"
                     /translation="MQKRTLGQGLEVSAIGYGCMGISQSYGTPPGREAGIKLIRAAFE
                     QGVTFFDTAEV"
BASE COUNT         1038 a         2195 c         2208 g          981 t
ORIGIN      
        1 ccagatgaag acggccatgg cgacgacacc cacgccgagc gcgatccagg ttgcggtctg
       61 gtcggcattg gcatcgaccg tgcccagtcc cgacaggcca tagaccacgc cgccgaaggc
      121 gaaggccgag atgaccaccg agacgacgtc gagcgacgcc ttgtgcggtg tcgtgacgtt
      181 gaccatgcgc cgccagccga ggaacagcgc caggagcgcg atcggcagca ccagcgcgaa
      241 cagatactgc caggcgtgca gatagctcag gatgatgccg gagaccaccg ggccggcggc
      301 cggcgccagc gacatcacca ccgagatatt gcccatcatc cggccgcggt tctgcggcgg
      361 caccagcgtc atcaccgtcg tcatcagcag cggcatcatc accgccgtgc cggacgcctg
      421 gatcacccgg cacgccacca gcagctccag cgacggcgca aacatcgcca gcgccgtgcc
      481 ggtcgagaac agcgccatcg ccagcatgta gatggtgcgc gtcgacagcc gctgcagcag
      541 gaagccggtg accgggatca ccaccgccat ggtcaggagg aacgccgtcg acagccattg
      601 cgccgcgctc ggcgtcgtgc cgaacgtatc gcggatcgtt ggaatggcga cgttcatgat
      661 ggtctcgttg agcatcacga cgaacgccga caccagcagc aggttgatga cgaggccgtt
      721 gcgcgccgcg ttggcaggat cgctcggggc gaccgcagtg cgcgggatgt cggcagacag
      781 ggcttcggtg gtcatggtcg gtccttcctg cgccggagcg caaagcggga gctgtcctag
      841 cagccctgcc gcccgtggaa actgggtgcg aatgcaaggc cggtctgtgc cgaacgcacg
      901 aaaccggcgg ggcctgagcc tatctcaggc gaagcgcggg cgaatcatcg ggggtatctc
      961 cttcggctga cccggaaagg atgcgacgtc gcactgacag cctctgtcag cagggtcgca
     1021 ccctctactg catctcgacg cgcgagggaa cgtcgaatcg acacgcgctc cgataaaatc
     1081 cgatgacatt tctcctggcc gcctgctggg atcgacgccg tcagggcgtc ccgtcggtcg
     1141 cgtagcgggt aagcgtgatc ccgtcctcga agctgcggat ttcgagcagc ttgagcgcca
     1201 cccggctgcc ttcgggaaac cacctgatgc cgcggccgag cagcaccgga taggtcatga
     1261 tccgcacctc gtcgatcaac cccgccggca gcaattcgtg caccaccgag gcgctgccga
     1321 agatcaggat gtcgccgccc ggctgcgcct tgatggccct ggccgcggcg atcaggtcgc
     1381 cctcgatcag ctgcgagttg gaccactcga ccgccttgag cgtccgcgag gcgacgtatt
     1441 tgggcagcga gttcatgcgg gtggcgtagc cgtccgggtc gttgacctcg ggccacaccg
     1501 cggcaaatcc ctcataggtg cgccggccgt agatcatcgc gccggcgttg gcgagctcgc
     1561 tgatcttgaa cgcatcgccg gcggggccgc gatgataggg ctcgacccag gcgccgagcc
     1621 cggagccctc catgccgacc gggtcttcga tcacgccgtc gatcgaggcg tattgggtga
     1681 cgatgatctt gcgcgccatt tttctctccg ttgcaggtgc cgggcatcag cgcccgttgc
     1741 tcatgcgacg agccgccgga cgcggaatcg acagcatgcg gaagatttct tcgccggcgc
     1801 gaccggctag cgcggcgcct tgtgcacggg atcgacccag tacacgtctt cgggcggctc
     1861 gaccgccgcg atctccggca ggttgaccac gaccgcctcg ttgtcggacc gcaccagcac
     1921 gcactgcagc ggctcgcccg ggtcggcgtt gatctcctgg tgcggcacga agggcggcac
     1981 gtagatgaaa tcgcccggcc aggcctcggc gacgaattcg agatgctcgc cccagcgcat
     2041 ccgcgcatgc ccggagacga catagatgac gctctccagc ggcccgtgat gatgcacccc
     2101 cgtccgggcg ttggcgtcga tccgcaccgt ccccgcccag agcttctgcg ccccgacccg
     2161 cgccgcgttg atcgccgcct gccggaacat cccgggcgtc tgcgccgtgt tgggatcgag
     2221 ccggtcgccg gcgatcacct gcaccccgtc gtgcttccag cgcggcggct gatcgtggtc
     2281 gtccgcgctc acttctccag cgcccgcttg agcgccgtgg caatgaggct cttgccggcg
     2341 gtgagctgga acgcgcggcc cgcggtccgc ggctcgtgca gcagcgcgac gagcacggcc
     2401 gccacatcgg cgcgcggcac cgccccggtc tcgatcgccg cctcgctcag cgtcaccttg
     2461 ccggtgcctt tggcatcggt gagctcgccc ggctcgagga tggtccagct gagccccgag
     2521 gcgcgcaggt gcgcgttcgc cgcgcgcttc tgcttgtaat aatccttcat ctcgtcgctg
     2581 gcccagtcgc cggtgagctt catgccggtc gaggcgccga tcgaggcgat cgccacgtac
     2641 cgtttgaccc ccgcgctctt tgccgcgcgc accgtcttga ccagcccggc ccggtcgagg
     2701 gcactcgact cgccggtcga cgagccggcg gcaaagacga tggcgtcggc acccttgaac
     2761 tgtgccgcga aatccgggcc gctcgagtgc tcgaggtcga ggatcaccgt ctccgccccg
     2821 agcttgacca tctcggccat cttcttcggg ttgcggatgg tggcgacgac gctgtcgccg
     2881 gccgcgacca gctgcccgac gaggcgtttt ccggtgcggc cgctgccgcc gatgacgacg
     2941 atgcgcatgc gaactcccta gggctgcggg gcgcgcagct gcgccgcatt ggccgcgagc
     3001 agctgccgca ccgtggtgag cttgagatcg tagcgcggcg gatcgagcgg ctcgagcgtg
     3061 ccgcgcccgg actgcatgtt gtgggtgtat tgcagctgct ggaagcgcgg aaacacctcg
     3121 gactcggcct ccggatgcgc cgcccgctca ccggcgatga gcgccgccag ctcctcgacg
     3181 ctgcccagcc ggttgagcgc gaacggcgtt ccaagcacct cgccggccgc cgccgccacc
     3241 tgccgcgccg tgatccggtc gccggagatc cgcaggatgt ccggcgcgtg cggatcgagc
     3301 gccactgccg cggcgatccg cgccgtgtcg gccatcgtcg tatagtccag cggctgctcc
     3361 ggactgcccc agtagttgac cgcgtgcgcg gcgaaatcga tcatccggcc gcgcagcagc
     3421 agctccatga agccgccgac gaggatcgag gtcgaggcga tcggcgcctg ctgcaggtgc
     3481 ccggtacgga actcgcggcg caggtcgaaa ttgcggttct cgcccgcggc cagccggaag
     3541 atgtcggcgg cgtagtcgga ggggatgaac cgcccgaccc gattggcgac cgccgcatcg
     3601 agcagcgccg cctgcgccgt gacgatgatg tcgcgcagcc cgttgagggc cgagaccacc
     3661 acgtcggtgc cggccagcgc ccggttgagc gaggccggat cggagtagtc ggcctcgacg
     3721 atggcggcac ccgagagccc gcgcagccgc tccggcgccg tgcccggccg caccagcgcc
     3781 cgcaccgtgg cgccgcgctc ccgcagcgct ccggcgatca gctgcccgag gcgcccggtg
     3841 gcgccggcga tcgcgatgct ggccatgagg ttttctctcc cgcgtgaggc ccgacagtgc
     3901 cacgccggag ccccggccgg aagccggacg gacgggcagg catgcggccg cctccgggcg
     3961 cccggatgct gcgggccggg cccgccgcaa gcgatgggga taagtgacgc gaaaactgca
     4021 ccgcaaccgc ccggacggct cagtcgcccg ccttgcgcca gcccgcggcc acggcgtcgg
     4081 cttcgctgca gaaccagcgc tcgcccttct ccggcgtgat gatggtcgcg gtgtaatagt
     4141 gctggccggg catgtggtag atgcgctcgc cgctggggat gctgatgttg cccttgatga
     4201 cacaggccgc cgcgaccgtc ccggcgaccg gcgccccgcc ctggccggtc tgcgcatacg
     4261 cgtagacgcc gccgaaaccg agcgccgccg cgaacagcat gaggacaacc tgacgcattc
     4321 gacccctcca tcacacgacg gagcggaggt agggccgggc ggacggccga ccaaattcta
     4381 tgtgcggcta tgctgacgaa gggctcgacg tcctcgatca aatgcgagcg atcctcgtcc
     4441 gccggcgcgc gcccggaccg tccccgccgg agatggcccg gatcgtccgc tagccgccga
     4501 ggccgtaggt cgcgacgacg ttgcccttgg gcgtgcgccg ctcgcggacc agcgccagcc
     4561 gcgtcgtcgg atcggacggc tcgaacagat gccggccgct gccggcgacc accgggtggg
     4621 tgatgagcgt cagctcgtcg agcaggcccg cgaacagcag ctgccgcacc agcgagatgc
     4681 cgcccatcac ggcgatctcc ttgcccggct gctgcttgag gcggcgcacg aaatcgagca
     4741 cgtcgccctc gatcagcgtc gcgttcgacc acgcgagcgg ccccttgagg gtgcgcgagg
     4801 cgacgtgctt tggcacgccg ttgatgaacg ttgcaaagcc ctcgtcgcgc tgcgcggtgg
     4861 gccagaaggc gccccattcc tcgtagccga cgcggccgag cagcaccgcg tcggtcctgc
     4921 ccatcacctc gcccagctcg gccccgagcg cctcgtcgaa ggcatcgaac tggaacttga
     4981 acggcgcctc gacgacaccg tcgaccgaat gaaagagccc tgcggtcagc ttgcgcatga
     5041 tgaaaatcct tgtgctgcgg cgccgcttgc cagcgccgtt atggacacga cgaacgggga
     5101 gaggaggaat cgacaggggg tacgattatt tcagtcggca cccttatcaa gcgagagagg
     5161 gtccgaaaac cttgcccatg ccgcgcttgg ccaacgatcg ttgcacggac cttcaatggc
     5221 cgcgatggcg caacgcctcg accagcagcg agaaggccgg tgagagctgg cggcggctcg
     5281 ggtagtagag atgatagccc ggataggtcg gccaccagtc ctcgaggatc ggcacgagcc
     5341 gcccggcggc gatgtgcggc cgaaccagat cctcgggaat gtgggcgaga ccaaagccgg
     5401 ccaacgcggc ggtgaggatc tggctggtgc tgttgaaggt gagctggccg tcgacgcgga
     5461 cgttgacctg ccggccggct ttctgcagct cccacgcata aaggccgccg ctggtgttga
     5521 gcctgaggtt gatgcaggtg tgggcgctga gatcgacggg cgatttcggg cgcttgcggt
     5581 cacggaaata gtcgggtgag ccgaccacgg ccatgcgcca gtcggcactg atgcgcaccg
     5641 cgatcatgtc cctcgccacc tgctcgccgc tgcggacgcc ggcatcgaac cgctgacgca
     5701 cgatgtcggt gaggccggga tcgaggaaga tctcgacctt gatgtccgga tagtccgtca
     5761 ggaaggacct gaggcggggc cagacaatga cgtcggcggc gtagtcggtg gcagtgatgc
     5821 ggatgctgcc ggcgggcctg tcgcgcagtg cgctcagcgc ctcgatctcg gcgtcgatct
     5881 cgctgaggcg cggggccacg gtacgcatca ggcgctcgcc ggcttcggtc agcgagacgc
     5941 tgcgcgtggt acgggcgagg acgcgcagac cgagccgctc ctcgaggcgg cggatggtgt
     6001 ggctcagcgc cgagggcgaa acgccgagcc tggcggcggc ccgcgtgaag ctccgctcgc
     6061 cggcgacagt gacgaaggca acgaggtcgg cgatggtcgc gcgcggcatt tgtgaatggt
     6121 agtcacaagt gcatgccgtt tccaaccgct aatcgcatgc gccaaagggg tctatatcag
     6181 cgtcatcggc ggcgccgcgg cgaacgcacc tcgcattttg cccgcggccc ggacaaacag
     6241 ctttcaggga gacgatgatg cagaagcgca cactgggcca aggcctcgaa gtttcggcga
     6301 ttggctatgg ctgcatgggc atcagccaat cgtatggcac cccgccggga cgcgaggcgg
     6361 ggatcaagct gatccgtgcc gctttcgagc agggcgtgac gttctttgat accgccgagg
     6421 tc
//
LOCUS       DATAZA010000159         4239 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_16704, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000159 DATAZA010000000
VERSION     DATAZA010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4239
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16704"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1876
                     /locus_tag="VHZ56_04040"
     CDS             <1..1876
                     /locus_tag="VHZ56_04040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003548363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX4297170.1"
                     /translation="DAISDYAIFMLDAAGYVASWNPGAERFKGYIADEIIGQHFSRFY
                     TLEDRATGLPARALHTAATEGHFEHEGWRLRKVGTRFWAHVVIDPIISPEGDLLGFAK
                     VTRDLTVRRASEEALRLSEERFRQLVEGVTDYAIYMLDPDGRVTNWNAGAERIKGYTP
                     AEIIGEHFSRFYTDADRLAGEPERALRTARDTGRFEKEGVRVRKDGTRFWANVVIDAI
                     RDEQGVLIGFTKITRDITERKASEQALAQASVELMQSQKMEAIGRLTGGVAHDFNNLL
                     MAVTGSLELLRKRMPDDPRLLRLLDNAMQGAQRGASLTQRMLAFARRQELKPAPVDVR
                     ALVEGMTDLLSRSLGPSVELKTDLPGTVRPVLIDANQLELAILNLAVNAKDAMPQGGR
                     LLLAAREERVSGNGALADGDYVCLSIRDNGSGMDAETLEHATEPFFTTKGVGKGTGLG
                     LAMVRGLTEQSGGTITIESVPAEGTTVTLWLPVSAIAAEPAGTAPARPEPPASPGRLK
                     VLVVDDDVLVAMNTTAMLEDLGHEAVEVHSGRLALEALAAQPDFDLMITDQAMPKMTG
                     MQLIAAARERLPQLPVILATGYAELPAEGPSVPRLGKPFMQDDLARALAQLRPALAGA
                     "
     gene            complement(1877..2128)
                     /locus_tag="VHZ56_04045"
     CDS             complement(1877..2128)
                     /locus_tag="VHZ56_04045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010909424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297171.1"
                     /translation="MSKNKTEKPVKSSSIEATLLELARPKMTPKELLKAARKAHPDAS
                     KKEIIRAAFGSIISVADSDTEKAVLLQNFALQERAVDDV"
     gene            complement(2220..2435)
                     /locus_tag="VHZ56_04050"
     CDS             complement(2220..2435)
                     /locus_tag="VHZ56_04050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297172.1"
                     /translation="MAEERITVAGLYHDLVARTSFVTVTWDASPDRRLVLPVPFGCGL
                     DELEAEAVKAVRSLSVELSTAPIKSAS"
     gene            complement(2535..3572)
                     /locus_tag="VHZ56_04055"
     CDS             complement(2535..3572)
                     /locus_tag="VHZ56_04055"
                     /inference="COORDINATES: protein motif:HMM:NF024770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family transcriptional regulator"
                     /protein_id="HEX4297173.1"
                     /translation="MAQKDGKGGTGDRGKQRATLRTIADLTGLSPSTVSLALRGGERL
                     RPETYRKVAEAASALGYIPDRAGVRLRTGKTNVIALVLERTDETIDFARYLIQGIGHA
                     IQGTRYHMNVTPEFGTGVTVEPIRYIMENKTADGVIITHTTARDPRVQLMMDHGFPFV
                     THGRTEFYTAHPYHDFHSEEFVRLAVDRMAQKGRRRVLLVVGRETTYNYHTIVTTFER
                     TGARLGIETVIISPSIDRPASAEMRRFGREVAQITPRFDGVICDSELRSMFMIAGFED
                     EGLVMGRDIDFICKQTSDLLPALYPQVDTIEEDVLAAGVELARLLIRRIEGEPAETLR
                     TLGEPRTHWRE"
     gene            3848..>4239
                     /locus_tag="VHZ56_04060"
     CDS             3848..>4239
                     /locus_tag="VHZ56_04060"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX4297174.1"
                     /translation="MLKRHLLVAAAAATAILAGAALPALADMSIEYNDSFAPLVEKGV
                     ANFEAANPGTKVNLIKLPSDGYQDRVALDLSSGSAPDLIMVDSFLVAEYAGTGYLLPL
                     DDMVKGWDQFQYYSKGLLDVASFNGKLYA"
BASE COUNT          670 a         1523 c         1338 g          708 t
ORIGIN      
        1 cgacgccatt tccgattatg ccatcttcat gctcgacgcc gcgggctacg tggcgagctg
       61 gaatccagga gccgagcgct tcaagggcta tatcgccgac gagatcatcg gccagcattt
      121 ctcacgcttc tataccctgg aagatcgcgc caccggcctg ccggcccgcg ccctccacac
      181 cgccgccacc gagggccact tcgagcatga gggctggcgc ctgcgcaagg ttggcacccg
      241 cttctgggcc catgtcgtca tcgatccgat catttcgccc gagggcgacc tgctgggctt
      301 tgccaaggtc acgcgcgacc tcaccgtccg gcgcgcttcc gaagaggcgc tgcgcctgag
      361 cgaggagcgc ttccgccagc tggtggaggg cgtcaccgac tacgccatct acatgctcga
      421 ccccgatggc cgcgtcacca actggaacgc cggcgcggag cgcatcaagg gctacacccc
      481 ggccgaaatc atcggcgagc acttctcccg tttctacacc gacgccgacc ggctggccgg
      541 cgagccggag cgggcgctgc gcaccgcccg cgacaccggc cgcttcgaga aggaaggcgt
      601 ccgcgtccgc aaggacggca cccgcttctg ggccaacgtc gtcatcgatg ccatccgcga
      661 cgagcagggc gtgctgatcg gcttcaccaa gatcacccgc gacatcaccg agcgcaaggc
      721 atcggagcag gcgctggcgc aggccagcgt cgagctgatg caatcccaga agatggaagc
      781 gatcggccgg ctgaccggcg gcgtcgccca cgatttcaac aatctgctga tggcggtgac
      841 cggcagcctc gagctgctgc gcaagcgcat gcccgacgat ccgcgcctcc tgcgcctgct
      901 cgacaacgcc atgcagggtg cccagcgcgg cgcctcgctg acgcagcgca tgctggcctt
      961 cgcccgccgc caggagctga agcccgcgcc ggtcgacgtg cgcgccctcg tcgagggcat
     1021 gaccgacctg ctgtcgcgct cgctcggccc ctcggtcgag ctgaagaccg acctgcctgg
     1081 taccgtccgc ccggtgctga tcgacgccaa ccagctcgag ctggcgatcc tcaatctcgc
     1141 cgtcaacgcc aaggacgcga tgccccaggg cggccgcctg ctgctcgcgg cgcgcgagga
     1201 gcgggtctcc ggcaatggcg cgctcgccga tggcgactat gtctgcctgt cgatccgcga
     1261 caacggctcg ggcatggatg ccgagacgct ggaacacgcc accgagccgt tcttcaccac
     1321 caagggcgtc ggcaagggca ccgggctggg gctggccatg gtgcgcggcc tgaccgagca
     1381 gtcgggcggc accatcacca tcgagagcgt ccccgccgag ggcaccaccg tgaccctgtg
     1441 gctgccggtc agcgctatcg ccgccgagcc ggcaggtacg gcccccgcgc gccccgagcc
     1501 gccggcgtcg ccgggccgcc tcaaggtgct ggtggtcgac gacgacgtgc tggtcgccat
     1561 gaacaccacc gccatgctcg aggatctcgg gcacgaggcc gtcgaggtgc attccggccg
     1621 cctggcgctc gaagcgctcg cggcacagcc ggatttcgac ctgatgatca ccgaccaggc
     1681 gatgccgaag atgaccggca tgcagctcat cgccgctgcg cgcgagcggc tcccgcagct
     1741 gccggtgatc ctcgccaccg gctatgccga gctgcccgcc gagggcccgt ccgtcccccg
     1801 cctcggcaag cccttcatgc aggacgatct ggcgcgcgcc ctggcgcagc tgcggccggc
     1861 cctcgccggc gcctgatcag acgtcgtcga cggcccgctc ctgcagcgcg aaattctgca
     1921 gcagcaccgc cttttccgta tcgctgtcgg caacgctgat gatcgagccg aacgcggcgc
     1981 ggatgatctc cttcttggag gcgtcgggat gcgccttgcg cgccgccttc agcaattcct
     2041 tcggtgtcat cttcggccgc gccagttcca gcagggtggc ctcgatcgag ctggatttca
     2101 ctggcttctc ggtcttgttt ttggacatgt cacttccccg gtggcgaact cgcgacaggc
     2161 gcacagtccg ctgtcacaat ccagtcacgg gcccgggtgt cgaaatcccg ggtgccgtgt
     2221 cacgaagccg atttgatcgg agcggtcgac agctccaccg aaagcgaccg caccgccttc
     2281 accgcctctg cttccagctc gtccagtccg cagccaaaag gcaccggaag caccagccgc
     2341 cggtcgggcg aggcgtccca ggtgacggtc acgaacgacg tccgggcaac cagatcgtgg
     2401 tacaggccgg cgaccgtaat gcgctcttcc gccatgctgt gtcctcccct gctttccacc
     2461 agcataggag cgttcgcaca gcctcgccac agagtgtttt cagcggcaac cgatggcgcg
     2521 aaacctagcc gacatcactc gcgccagtgc gtcctcggct cgcccagcgt gcggagggtc
     2581 tccgccggtt cgccctcgat ccggcggatc agcagccgcg ccagctcgac gccggcggcc
     2641 agcacgtcct cctcgatcgt gtcgacctgc ggatagagtg ccggcagcag gtccgatgtc
     2701 tgcttgcaga tgaagtcgat gtcgcggccc atcaccaggc cctcgtcctc gaagccggcg
     2761 atcatgaaca tcgagcgcag ttcgctgtcg cagatgacgc cgtcgaagcg cggcgtgatc
     2821 tgcgccacct cgcgcccgaa ccgccgcatc tcggccgacg ccggccggtc gatcgacggg
     2881 ctgatgatca ccgtctcgat gcccagccgc gccccggtgc gctcgaaggt ggtgacgatc
     2941 gtgtggtagt tgtaggtggt ctcgcgcccc accaccagca gcacgcgccg ccggcccttc
     3001 tgcgccatcc ggtcgaccgc cagccgcacg aactcctcgg agtggaaatc gtggtagggg
     3061 tgcgccgtgt agaactcggt tcgcccgtgg gtgacgaacg ggaagccgtg gtccatcatc
     3121 agctgcacgc gcgggtcgcg cgccgtggtg tgggtgatga tcaccccgtc cgccgtcttg
     3181 ttttccatga tgtagcggat cggctcgacc gtcaccccgg tgccgaactc cggcgtcacg
     3241 ttcatgtggt agcgcgtccc ctggatggcg tggccgatgc cctggatcag gtagcgcgcg
     3301 aaatcgatcg tctcgtcggt gcgctcgagc accagtgcga tgacgttggt cttgccggtc
     3361 ctgagcctta ccccggcacg gtccgggatg taccccagcg cgctcgccgc ctcggccacc
     3421 ttgcggtagg tctccggccg gagccgctcg ccgccgcgca atgccagcga caccgtcgac
     3481 gggctgagcc cggtgaggtc ggcaatcgtc cgcagggtcg cgcgttgctt gcccctgtcg
     3541 cccgtcccgc ccttgccgtc cttctgcgcc atgttgcctc gccggccgca tctgttcaca
     3601 tgcgcccggg catttcaacg ggctgcggtt gcaacgatac agcaatgctg ccatttccgc
     3661 ccggcttgcc gataccgggg gcattttcgc tgaaaaccca gcagattgcg agcgttgacg
     3721 cgcgacgcga ccgcgaaatc cggcaagcta ttgcaacgtt gcaatttttc ggtttagctg
     3781 ccgctgctgt ttagtgggcg agcggcgacg ccaagtcacc gccgctctca acgggaggaa
     3841 atctggaatg ctgaaacgcc atctgctggt cgccgccgcg gcggccacgg ccatcctggc
     3901 gggcgccgcc ttgcccgctt tggccgacat gtccatcgaa tacaacgaca gcttcgcgcc
     3961 cctggtggaa aagggcgtgg ccaatttcga agccgccaat ccgggcacca aggtcaacct
     4021 gatcaagctg cccagcgacg gctaccagga ccgtgtcgcg ctcgatctga gctccggctc
     4081 ggcccccgat ctcatcatgg tcgacagctt cctcgtcgcc gaatatgccg gcacgggcta
     4141 cctgctgccg ctcgacgaca tggtgaaggg ctgggaccag ttccagtact acagcaaggg
     4201 cctgctcgac gtcgcctcgt tcaacggcaa gctctacgc
//
LOCUS       DATAZA010000160         1529 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2453649, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000160 DATAZA010000000
VERSION     DATAZA010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2453649"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..267
                     /locus_tag="VHZ56_04065"
     CDS             <1..267
                     /locus_tag="VHZ56_04065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019862968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-loop NTPase"
                     /protein_id="HEX4297175.1"
                     /translation="LLGLVENMSYFVAPDTGKRYDIFGHGGAARAAAVFGMPFLGEIP
                     LDMAIRETSDAGRPVVAGDPAGPQATAFRSIARDILDRTPQLRG"
     gene            340..>1529
                     /locus_tag="VHZ56_04070"
     CDS             340..>1529
                     /locus_tag="VHZ56_04070"
                     /EC_number="3.2.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008422 - beta-glucosidase activity
                     [Evidence IEA];
                     GO_process: GO:0030245 - cellulose catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GH1 family beta-glucosidase"
                     /protein_id="HEX4297176.1"
                     /translation="MFSVERGQFGPNFVFGAATAAYQIEGGQIDGRGPCIWDTFAATP
                     GNVKNADDGHMADDHYHRWPEDLDLIRDGGFDGYRFSLAWPRLIPEGTGAVNQAGLDF
                     YDRLIDGMLERGLKPFATLYHWDLPSPLQDRGGWMNRDIAGWFADYAALVGRQFGDRL
                     HATATINEPWCVSVLSHLLGVHAPGYRDLRAAARAMHHVLLAHGTAVDALRSAGVKNI
                     GIVTNLEKCEPATDKPEDIAATDIGDALFNRWFLGGVYKGQYPEVLVRILEKYLPQDW
                     QKDMPVVSRPLDWAGINYYSRGLYAADPGRPAIPIRTVKGPLEKNDLGWEIYPRGLTD
                     LLVRVSREYTKVPIYVTENGMSENNDERRVAYYDAHLKAVLEAQQQGADVRGYFAWSL
                     LDNY"
BASE COUNT          264 a          556 c          480 g          229 t
ORIGIN      
        1 ctgctcgggc tcgtcgagaa catgagctac ttcgtcgccc ccgacaccgg caagcgctac
       61 gacatcttcg gccacggcgg cgccgcgcgg gccgcggcag tgttcggcat gccgttcctc
      121 ggcgaaattc ccctcgacat ggcgatccgc gaaacctccg acgccggacg gccagtcgtg
      181 gcgggcgatc cggccgggcc gcaggccacc gcgttccgca gcatcgcccg cgacatcctc
      241 gaccgcaccc cgcaattgcg cggctagcga ttcgcctcta gcaatcgatt acatcgaacg
      301 ccggatcgag ccggcgcagc gaaatgcccg ggaggtcaga tgttttccgt tgagcgcggc
      361 cagttcggcc cgaacttcgt ctttggcgcc gcgaccgccg cgtaccagat cgagggcggc
      421 cagatcgacg gccgcggtcc ctgtatctgg gacaccttcg ccgccacccc gggcaacgtg
      481 aagaacgccg acgacggcca catggccgac gatcactacc atcgctggcc ggaagacctc
      541 gatctcatcc gcgacggcgg cttcgacggc taccgcttct cgctggcatg gccgcggctg
      601 atccccgagg gaaccggcgc cgtcaaccag gccgggctcg atttctacga ccggctgatc
      661 gacggcatgc tcgagcgcgg cctcaagccg tttgccacgc tctaccactg ggacctgccg
      721 agcccgctgc aggaccgcgg cggctggatg aaccgcgaca tcgccggctg gttcgccgac
      781 tacgccgcgc tcgtcggccg gcagttcggc gaccgcctgc atgccaccgc gacgatcaac
      841 gagccctggt gcgtctccgt cctgagccat ctgctcggcg tccatgcgcc cggctaccgc
      901 gacctgcggg cggcggcgcg cgccatgcac cacgtgctgt tggcgcacgg caccgcggtc
      961 gacgcgctgc ggtccgccgg cgtcaagaac atcggcatcg tcaccaacct cgaaaagtgc
     1021 gagccggcga ccgacaagcc cgaggacatc gccgccaccg acatcggcga cgcgctgttc
     1081 aaccgctggt tcctcggcgg cgtctacaag gggcaatacc ccgaggtgct ggtgcgcatc
     1141 ctcgagaaat atctgccgca ggactggcag aaggatatgc cggtggtgag ccggccgctc
     1201 gactgggccg gcatcaacta ctattcgcgc ggcctctacg ccgccgatcc aggccgcccc
     1261 gcgatcccga tccggaccgt caagggaccg ctcgaaaaga acgacctcgg ctgggaaatc
     1321 tatcccaggg gcctgaccga cctgctggtg cgcgtctcgc gcgaatacac caaggtgcca
     1381 atctacgtca ccgagaacgg catgtccgaa aacaatgacg agcgccgcgt cgcctactac
     1441 gacgcgcact tgaaggccgt tctggaggcg cagcagcagg gggccgacgt gcgcggctat
     1501 ttcgcctggt cgctgctcga caactacga
//
LOCUS       DATAZA010000161         3336 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1410225, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000161 DATAZA010000000
VERSION     DATAZA010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3336
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1410225"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..583)
                     /locus_tag="VHZ56_04075"
     CDS             complement(<1..583)
                     /locus_tag="VHZ56_04075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297177.1"
                     /translation="MDWGPVLIGLVSVAVPIVGVLLVWLQWRERQMRMDDVLHWASDT
                     IRTLQTVYLACYLGDRLFGPDEMRAILQKAAVDTSVSVEQGRLFFRNTADPEHGKERH
                     PAYRGYRPELLDPVVVAHQIACQWSGADEKARLRMTLVAEDCVKRFVSFAQLEVGRSR
                     TVSADAGRKGEGETLPALMGRLSVGRIEKLKANG"
     gene            complement(646..1257)
                     /locus_tag="VHZ56_04080"
     CDS             complement(646..1257)
                     /locus_tag="VHZ56_04080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297178.1"
                     /translation="MLKFAIMAVAGLAILATPALAQNAPRPPTTKIGGVVTAVMAQEL
                     DLTASDGSKVVVVLGPKTRIALSTPLAVDDIKAGSYVGAGAMADGKGGNTAVEITVFP
                     EASRGIGEGFHQWDQGPNSTMTNGTVSQVVGASNRTLTITYKGGQQQVTIPDGTPIVQ
                     IAQADASALTVGAHVVVRAFKADDGTLTAGYVTVGASGTTPPG"
     gene            1451..1921
                     /locus_tag="VHZ56_04085"
     CDS             1451..1921
                     /locus_tag="VHZ56_04085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297179.1"
                     /translation="MFRSACLAAALVALTAAPVFAGPSESSFLSRLVGSWSGSGNLTG
                     AEDGPVSCRIDFHGSAGKVVYQGRCNIQDMGAQSFAGGITYDDASHRFLNRSSQGTIT
                     GIYRGGSLTFTTKAQSDRGRSYSVMTLSPSRISIDFTILDSSGDKTRAHISFSK"
     gene            complement(1925..2206)
                     /locus_tag="VHZ56_04090"
     CDS             complement(1925..2206)
                     /locus_tag="VHZ56_04090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2277 domain-containing protein"
                     /protein_id="HEX4297180.1"
                     /translation="MCRNIRPLFNFEPPATPNEMHDASLQFVRKISGYTHPSKGNEAA
                     FEEAVEDIEKIVRRLLKSLETTAPPRDREIEAEKRRERSRLRFPERAGA"
     gene            2355..2882
                     /locus_tag="VHZ56_04095"
     CDS             2355..2882
                     /locus_tag="VHZ56_04095"
                     /inference="COORDINATES: protein motif:HMM:TIGR00481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HEX4297181.1"
                     /translation="MMRLALAATLALLASPALAIQLTSPDVKDGVQFDTKFVCAKFGG
                     QSISPALAWTAIPAGAKSLAVTMFDPDAGSAGYWHWLAVDIPVTATGLDQNAGAAGGA
                     MPAGTTPVPNGAGHANYDGPCPPPGSPHHYQITVWALPDAKSGIPAGMKPADVGQWLS
                     QHAIESARIVPIYGK"
     gene            3063..>3336
                     /locus_tag="VHZ56_04100"
     CDS             3063..>3336
                     /locus_tag="VHZ56_04100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020086587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297182.1"
                     /translation="MPKRTDIKSILIIGAGPIIIGQACEFDYSGTQACKALKDEGYRI
                     VLVNSNPATIMTDPDLADATYMEPITPEVVAMIIEKERAARPDDKLA"
BASE COUNT          542 a         1220 c         1024 g          550 t
ORIGIN      
        1 ggccgttggc cttgagtttc tcgatgcggc cgacgctgag ccggcccatc agcgcgggca
       61 gcgtctcgcc ctcgcccttg cgcccggcat cggcggaaac cgtccggctg cgcccgactt
      121 cgagctgcgc gaacgacacg aaccgcttca cacagtcctc ggcgaccagc gtcatccgca
      181 gccgcgcttt ctcatcggca ccggaccact gacaggcgat ctggtgcgcc accacgaccg
      241 gatccagcag ctccggccga tagccgcgat aggccggatg ccgctccttg ccatgctcgg
      301 ggtccgccgt gttgcggaaa aacaggcggc cctgctccac cgataccgag gtgtccacgg
      361 ccgccttctg caggatcgcg cgcatctcgt cgggcccgaa cagccggtcg ccaagatagc
      421 aggcgagata caccgtctgc agggtgcgga tggtgtccga cgcccagtgc agcacgtcgt
      481 ccatccgcat ctggcgctcg cgccattgca gccagaccag cagcacgccg acgatcggaa
      541 cggcgaccga taccaggcct atgagaacgg gaccccaatc catgggccct ctctaacacg
      601 gcgcagcggg gacgaaaaac cccgcctgcg cgggtggtta gcggctcagc cgggcggcgt
      661 cgtgccactg gcgccaacgg tgacgtaacc cgccgtcagc gtgccgtcgt cggccttgaa
      721 cgcccggacc accacatgcg cgcccacggt cagggcgctc gcgtcggcct gcgcgatctg
      781 cacgatcggg gtgccgtcag ggatcgtcac ctgctgctgg ccgcccttgt aggtgatggt
      841 cagcgtgcgg ttgctggccc ccaccacctg cgaaaccgtg ccgttggtca tcgtcgagtt
      901 cggcccctgg tcccactggt ggaagccctc gccgatgccg cgcgaagcct cggggaaaac
      961 cgtgatttca acggcggtgt tgccgccttt gccgtccgcc atggcgccgg cgccgacata
     1021 gctgccggcc ttgatgtcgt cgacggccag cggcgtcgac agcgcaatgc gggtcttcgg
     1081 cccgagcacc accacgacct tgctgccgtc gctcgcggtc aggtcgagtt cctgcgccat
     1141 caccgccgtg accacgccgc cgatcttggt ggtcggcggc cgcggcgcgt tctgcgccag
     1201 cgccggcgtc gcaagaatgg ccaggccggc aacggccatg atggcgaatt tcagcatcga
     1261 aacatctccc tggagccgct gcgggtcgag gcgaccggca gcgcggggca ccctgccccc
     1321 gctcgcgatg ccctggaggt aaagccctta cacgatctcg ggaggccgca aagttgacga
     1381 cgcctctaaa cctttggttg ccacaattgg cagatagtgg cgccgttcaa gtcattgatg
     1441 gattgatctg atgttccgct ccgcctgcct cgccgccgcc ctcgtcgccc tcaccgcggc
     1501 tcccgttttt gccggcccgt ccgaatcgag ctttctgtcg cgcctcgtcg gcagctggag
     1561 cggcagcggc aacctgaccg gcgccgagga tggcccggtg tcgtgccgca tcgattttca
     1621 cggcagcgcc ggcaaggtcg tctatcaggg ccgttgcaac atccaggaca tgggcgccca
     1681 gagctttgcc ggcggcatca cctatgacga tgcctcgcac cggttcctca accgctccag
     1741 ccagggcacc atcaccggca tctatcgcgg cggctcgctg acgttcacca ccaaggcaca
     1801 gagcgaccgc ggccgctcct attcggtgat gacgctgtcg ccgagccgga tcagcatcga
     1861 tttcaccatt ctcgacagtt ccggcgacaa gacccgcgcc catatcagct tttcgaagta
     1921 aggctcaggc gcccgcacgc tccggaaaac gcagccgcga gcgttcgcgg cgcttttccg
     1981 cttcgatctc gcgatcgcgt ggcggcgcgg tcgtttcgag cgacttcagc agccgccgca
     2041 cgatcttttc gatgtcctcg accgcctcct cgaaggcggc ttcgttgcct ttggagggat
     2101 gcgtgtagcc tgaaatcttg cggacgaact gcagcgacgc gtcatgcatc tcgttgggcg
     2161 tggccggcgg ttcgaagttg aacagtggcc tgatgttgcg gcacatgggc gcctcccttg
     2221 tctcggcgcc catcgagacg ccgaaagatg gccttggcaa ggccccgcgt tcgcccgcct
     2281 gcgccgcctc ttgtgatgga agaggcaccg acgcgcggcg ttatcctccc tgcaaccccc
     2341 gcagaaggag atccatgatg cgccttgccc tcgccgccac gctggccctg ctcgccagtc
     2401 ccgcgctggc cattcagttg accagcccgg acgtcaagga cggagtccag ttcgacacga
     2461 agttcgtctg cgccaaattc ggtggccaga gcatctcgcc cgcgctcgcc tggacggcga
     2521 taccggccgg cgcgaagagc ctcgcggtga ccatgttcga tcccgacgcc ggatcggccg
     2581 gatactggca ctggctggcc gtcgatatcc cggtcaccgc caccgggctc gaccagaacg
     2641 ccggcgcggc cggcggcgcc atgcccgccg gcacgacccc ggtgcccaac ggcgccggac
     2701 acgccaacta cgacggtccc tgcccgccgc ccggcagtcc gcaccattac cagattacgg
     2761 tctgggccct gcccgacgcc aaatccggca ttcccgccgg catgaaaccc gccgatgtcg
     2821 gccagtggct cagccagcac gcgatcgagt cggcccgcat cgtcccgatc tacggcaagt
     2881 gatcgcatcc ggcggccggc gccccgtgcc ggccgccctc gagcgcccgc cctttccttc
     2941 tccggcgcct tcggctagag agccgcctta acctgcagac tccgccgcga accacccgcc
     3001 cttccgggtc tttccgcgcg cccacgcatg accagctcat gcgcagaacc aagagtggcc
     3061 tgatgcccaa gcgcaccgat atcaagtcga tcctcatcat cggcgcggga ccgatcatca
     3121 tcggccaggc ctgcgagttc gattactccg gcacgcaggc ctgcaaggcg ctgaaggacg
     3181 agggctaccg catcgtcctc gtcaactcca atccggcgac gatcatgacc gacccggatc
     3241 tggccgacgc cacctacatg gagccgatca cgcccgaagt ggtggccatg atcatcgaaa
     3301 aggagcgcgc cgcgcgcccc gacgacaagc tggcgc
//
LOCUS       DATAZA010000162         3071 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1758156, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000162 DATAZA010000000
VERSION     DATAZA010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3071
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1758156"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..659)
                     /locus_tag="VHZ56_04105"
     CDS             complement(<1..659)
                     /locus_tag="VHZ56_04105"
                     /inference="COORDINATES: protein motif:HMM:NF013703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEX4297183.1"
                     /translation="MNTDAAPSSSGSVTSLSHETWGAEFGALFALGWPLVVAQLASIA
                     LVTTDTIMLGWLGPKYLAAAALANALFIATLLFGQGIVGGVAPIMAQALGARDFRSVR
                     RTVRQGLWVAAIAAIVLFPVIWNIAPIYRGLGEDPELIDMAEWFIHFVGWTVFPAFFI
                     VVFRSFLAAHGATRIILWITVAGVVVNAAGDYGLIFGNWGMPRLGLAGAGISTTTVNV
                     V"
     gene            complement(752..1144)
                     /locus_tag="VHZ56_04110"
     CDS             complement(752..1144)
                     /locus_tag="VHZ56_04110"
                     /inference="COORDINATES: protein motif:HMM:NF019844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0070064 - proline-rich region binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEX4297184.1"
                     /translation="MSLKTNLLKAAGLGAVLAAVSVSGAFAATATATVNVRSGPGTGY
                     GVVGQLYPGQYVRIVDQSGGWCDVTRGWVSCAYLTGGSYGGDYYVAPPPVTFDFGFGY
                     PGFGFGGYPRYHNYQHDHNYQHRPHNNH"
     gene            1479..>3071
                     /locus_tag="VHZ56_04115"
     CDS             1479..>3071
                     /locus_tag="VHZ56_04115"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HEX4297185.1"
                     /translation="MAQQMTGAEMVIQALIDQGVEHIFGYPGGAVLPMYDAIFQQDKV
                     QHILVRHEQGATHMAEGYARSTGKVGVVLVTSGPGATNAVTGLTDALMDSVPLVCLTG
                     QVATPLIGSDAFQECDTVGITRSCTKHNYLVKSVNDLARILHEAFYIAQSGRPGPVLV
                     DIPKDVQFALGTYYGPTEIEATRHRSYHPQVDGDTRLIEAAVDMMLRAERPLFYTGGG
                     VVNSGPEASQQLRELAELTGFPVTSTLMGLGAFPGSSPQWLGMLGMHGSYEANMAMHD
                     CDLMINIGARFDDRITGRIDAFSPGSKKVHVDIDPSSINKNVMIDLPIIGDCGRVLKE
                     MVRIWRSKTNAPRTEALAPWWAQVEQWRAKNSFGFQNSTSVIKPQYAIQRLYEATRGR
                     DVYVTTEVGQHQMWAAQHFPFELPNRWMTSGGLGTMGYGLPASIGVQVAHPEALVIDI
                     AGEASVQMTMQEMSTAVQYGLPVKIFILNNERMGMVRQWQELLHGGRYAHSYSESLPD
                     FVKLAEAYGGHGIKCDDPAKLDD"
BASE COUNT          605 a          936 c         1044 g          486 t
ORIGIN      
        1 atgacgacgt tgacggtcgt cgtcgaaatc ccggcaccgg cgagcccgag gcggggcatc
       61 ccccaattgc cgaagatcag cccgtagtcg ccggcggcgt tgaccaccac cccggccacg
      121 gtaatccaga ggatgatccg ggtcgcgccg tgggcggcga ggaaggaccg aaagacgacg
      181 atgaagaagg ccgggaacac cgtccagccg acgaaatgga tgaaccactc cgccatatcg
      241 atcagctcgg gatcctcgcc gagcccgcga tagatcggag caatgttcca gatcaccgga
      301 aacagcacga tcgcagcgat cgccgcgacc cagagcccct gccgcacggt gcggcggacg
      361 gagcggaagt cgcgcgctcc aagggcctgc gccatgatcg gtgccactcc gccgacgatg
      421 ccctggccga acagcagcgt cgcgatgaac agggcattgg ccagcgcagc agcggcaaga
      481 tattttgggc caagccagcc gagcatgatg gtgtcggtgg tgacaagcgc gatggacgcg
      541 agttgcgcga cgaccagcgg ccagccgagc gcaaagaggg cgccgaactc ggcgccccag
      601 gtttcgtgcg acaatgaagt cacgctgccg gaagatgacg gcgccgcatc ggtattcatt
      661 tatggagtcc actcgcccgg gcggtttagc tcacggccgg tggaatgcaa accccggcgc
      721 gaacgccggg gttctggtca ggcccgcacg actaatggtt gttgtgcgga cgatgctggt
      781 agttatggtc gtgctgatag ttgtggtagc ggggatagcc accgaagccg aagcccggat
      841 agccgaagcc gaagtcgaac gtcacgggcg gcggagcgac gtagtagtcg ccgccatagc
      901 tgccgcccgt caggtacgcg cagctgaccc agccccgcgt tacatcgcac cagccgccgg
      961 attgatcgac gatgcggacg tactgacccg gatagagctg gcccactacg ccgtagccgg
     1021 taccgggacc ggagcgcacg ttgaccgtcg ccgtcgccgt tgcggcgaaa gccccgctca
     1081 ccgacaccgc ggccagcacg gcgccgaggc cggctgcttt tagaagattt gttttcaatg
     1141 acatgcgagt tcctttctcg ccctcttgcc ggggataata gggcccggga aagatcgttc
     1201 cccagtgaca aactgttcat cctgcggcaa ggcgtccgac aggtgcaggg gtgagcggcc
     1261 aacacggcct tgacacccgg cggcaccgac gcctaagttt gcgatgcatt cagggagcac
     1321 ggttgtgcgg agcattctcg tagtagtggg gcgcatcggt cacgtgaggt gaaacctcgc
     1381 gggaaggctg gtgcgctcga acaggtcccg aacggggcct tttttattac cctgattcca
     1441 gacgtgacga ggccgagagg ccagtgagga gactgaacat ggcccagcag atgacgggcg
     1501 ccgaaatggt gatccaggcg ctgatcgacc agggcgtcga gcatatcttc ggctacccgg
     1561 gcggcgccgt cctgccgatg tacgatgcga ttttccagca ggacaaggtg cagcacatcc
     1621 tggtccggca cgagcagggc gccacgcaca tggcggaggg ctacgcccgc tcgaccggca
     1681 aggtcggtgt ggtgctggtg acctccgggc cgggggcaac caatgccgtc accgggctca
     1741 ccgacgcgct catggattca gtgccgctgg tctgcctcac cgggcaggtt gcgaccccgc
     1801 tcatcggctc ggatgcattc caggaatgcg acacggtcgg gatcacccgc tcgtgcacca
     1861 agcacaatta cctcgtcaaa tcggtgaacg acctggcgcg gatcctgcat gaggcgttct
     1921 acatcgccca gagcggccgg cccggaccgg tgctggtcga cataccaaag gacgtgcagt
     1981 ttgcgctcgg gacctattac gggccgaccg agatcgaggc gacgcggcac agaagctacc
     2041 atccgcaggt cgatggcgac acgcggctga tcgaggccgc ggtcgacatg atgctgcggg
     2101 cggagcggcc gctgttctac acagggggcg gcgtcgtcaa ctccggcccc gaagcgagcc
     2161 agcagctgcg ggagctggcg gagctcacgg gttttccggt gacctcgacc ctgatggggc
     2221 tgggggcgtt ccccggctcg agcccgcaat ggctcggcat gctgggcatg cacggtagct
     2281 acgaagccaa catggcgatg cacgactgcg acctgatgat caacatcggg gctcggttcg
     2341 acgaccgcat caccgggcgg atcgatgcgt tctctcccgg gtccaagaag gtgcacgtcg
     2401 acatcgatcc cagctcgatc aacaagaacg tgatgatcga cctgccgatc atcggcgatt
     2461 gcggacgcgt gctgaaggaa atggtccgca tctggcgcag caagaccaat gcgccgcgga
     2521 cggaggcact ggcgccatgg tgggcgcagg tcgagcagtg gcgggcgaag aattcgttcg
     2581 gcttccagaa ctcgaccagc gtgatcaagc cgcaatacgc gatccagcgg ctgtacgagg
     2641 cgaccagggg ccgcgacgtc tatgtcacga ccgaagtcgg ccagcaccag atgtgggcgg
     2701 cgcagcattt tccctttgaa ctgccgaacc ggtggatgac ctccggcggc ctgggcacga
     2761 tggggtatgg gctgccggcc tcgatcggcg tgcaggttgc gcatcccgag gcgctggtca
     2821 tcgacatcgc gggcgaggcg agcgtgcaga tgacgatgca ggagatgtcg acggcggtgc
     2881 agtacggcct gccggtcaag atcttcatcc tcaacaacga gcgcatgggc atggtgcggc
     2941 agtggcagga gctgctgcat ggcgggcgct acgcacatag ctactcggaa tcgctgccgg
     3001 atttcgtcaa gctggcggag gcatatggcg ggcacgggat caaatgtgac gatccggcca
     3061 agctggacga c
//
LOCUS       DATAZA010000163         1784 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2339040, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000163 DATAZA010000000
VERSION     DATAZA010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2339040"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            412..1002
                     /locus_tag="VHZ56_04120"
     CDS             412..1002
                     /locus_tag="VHZ56_04120"
                     /inference="COORDINATES: protein motif:HMM:NF020374.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1796 family putative cysteine peptidase"
                     /protein_id="HEX4297186.1"
                     /translation="MGQNFDYAISLGSSCRARHQLVRVYGKDACPSGIFDWQGTSAAA
                     VAAYLRHDFDGMFELEDLRIEGGMVRNFRYGTWHLHQFPKGIGVEDIAAHYPEARSRH
                     DHLSQKTLRLLRGRDRLLLCLNRHLSPVHWARLWLQLRLRYPQLSFILLNGPKGDFPA
                     DVRWEGDDALWDRHLAPFQPALRPVAGVLRSSPETA"
     gene            1090..>1784
                     /locus_tag="VHZ56_04125"
     CDS             1090..>1784
                     /locus_tag="VHZ56_04125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297187.1"
                     /translation="MHVRHALMATAVALAAAAASIGVTQIRAAQDPVLSYCPSHPGAI
                     DCATAVKMFLQFGHPSDDELVTVINTIVAELDGGGASPRGYADTAQALDILAGAIRNS
                     GERTIATTLAHNVAANAPASPPSGGGGFKTALDGFGQRGGNSSSGGSGKSSSSGSGAG
                     TSSGASGSSSSGAGTSSGSSGSSSGTSSGSSSGNPGSGSSGTSSGTSSGTSSGTSSGS
                     SGSDPGSGSSGTSS"
BASE COUNT          298 a          629 c          590 g          267 t
ORIGIN      
        1 ccggcagcgc gcgccatgaa ggtactggac ggcagcgtca gggcgccggc gtcgaactcg
       61 aacttgccgt tcggcgccga taccgccggg ccggcagcaa gggccggtgc ggattgcaaa
      121 caacaaagca acagcactgc cgaaccagcg gtgccaaacc atccaagccg cgccaagaga
      181 gcccccaagg caatcgtcgc aacagtcctt aagtattaat acaaagttaa agcaccatcg
      241 attgagggcc gcaagaggaa agctgtaggc ggcgccggct cggcagccaa agactcgcgt
      301 cgagcctcct gccgctctcg atgactgacc tcagtcaccc gttgcagagc cgttgcagga
      361 cgcctccgat gacttgccgc cggcatcgcg gcaggactag actcggcggt cgtgggccag
      421 aactttgact acgccatcag tctcggatcg agttgccggg cgcgccacca gctggtgcgc
      481 gtttacggca aggacgcctg tccgtcgggc atcttcgatt ggcagggcac gtcggcggcg
      541 gcggttgcgg cgtacctgcg gcacgatttt gacggcatgt tcgagctcga ggatctgcgc
      601 atcgaggggg gcatggtgcg caatttccgc tacgggacct ggcacctcca ccagttcccc
      661 aagggcatcg gggtcgagga catcgcggcg cactatcccg aggcgcgctc gcgccatgac
      721 catttgagcc agaagaccct gcgactgctg cgcgggcgcg accggctgct gctgtgcctc
      781 aaccgccacc tgtcgccggt tcactgggcc cggctctggc tgcagttgcg cctgcgctac
      841 ccacagctga gcttcatcct gctcaacggc ccgaagggcg actttccggc cgacgtgcgc
      901 tgggagggag acgacgcgct ctgggaccgg cacctggcgc cgttccagcc cgctttgcgc
      961 cccgtcgccg gggtcctgcg cagcagtccc gagaccgcct gacactactg ctgatcttcc
     1021 accgatcggt ggaagacagg gctgcgtggc ccgcggcatc gtcggctcct gtctgcaggg
     1081 agatcgcgga tgcacgttcg acacgccctc atggcgaccg ccgtcgccct cgccgccgcg
     1141 gccgcctcga tcggcgtcac ccagatccgg gcagctcagg atccggtcct cagctactgc
     1201 ccgtcgcatc ccggcgcgat cgactgcgca acggccgtca agatgttcct gcagttcggc
     1261 catccgagcg acgacgagct ggtgacggtc atcaacacca tcgtcgccga gctcgacggc
     1321 ggcggcgcgt cgccccgcgg ctatgccgac accgcccagg ccctcgacat cctcgcgggt
     1381 gccatccgga attcgggcga gcgcaccatc gccacgacgc tcgcgcacaa tgtggctgcc
     1441 aacgcgcccg cgtcgccgcc atcgggcggc gggggcttca agacggcgct cgacggcttc
     1501 ggccagcgcg gcggcaactc cagctccggc ggctccggca agagctcgtc cagcggcagc
     1561 ggcgccggga cgagttcggg agcgagcggc agtagcagct ccggtgcggg aacgagttcc
     1621 gggtcgagcg gaagcagctc gggaacaagc tcgggctcca gctccggtaa cccgggttcc
     1681 ggcagctccg gcaccagttc gggcaccagc tccgggacga gttcgggcac cagctcgggc
     1741 tccagcggca gcgacccggg ttccggcagc tccggcacca gctc
//
LOCUS       DATAZA010000164         3773 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2802767, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000164 DATAZA010000000
VERSION     DATAZA010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3773
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2802767"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1794
                     /locus_tag="VHZ56_04130"
     CDS             <1..1794
                     /locus_tag="VHZ56_04130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007814591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEX4297188.1"
                     /translation="TGSEPRVAGAAPEVSLGADARREPALGIDRRYTAASEPAIEDDY
                     PPEDDYPPEDDADIEIAPARPARIVAPAKRPAPGARAAREAQPSLLETESGFELPALN
                     LLSEAKHRGLADEHRPERLEAMARRLEGVLEDFGVRGDIINVRPGPVVTLYELEPAPG
                     IKSSRVISLADDIARSMSAISARVAVVPGRNAIGIELPNENRETVYLREMLASQDFEK
                     MKGKLPICLGKTIGGEPVIADLARMPHLLIAGTTGSGKSVGINTFILSLLYQMTPEQC
                     RLIMIDPKMLELSVYDGIPHLLTPVVTDPAKAVTALKWAVREMEDRYRKMSKIGVRNI
                     DGFNQRVGEAAQKGETITRTVQTGFDRETGEAIYESEQFQLEPLPFIVVVIDEMADLM
                     MVAGKDIEGAVQRLAQMARAAGIHVIMATQRPSVDVITGTIKANFPTRISFQVTSKID
                     SRTILGEQGAEQLLGNGDMLYMAGGGRIRRLHGPFVSDHEVEGVVQHLKSQGAPDYLD
                     SITAEDEEFDPESATGDGEFGGSGDELYDKAVNIVLQDKKASTSYVQRRLAIGYNRAA
                     SLIERMEKDGVISPANHSGKREILVGSDAGY"
     gene            1892..2536
                     /locus_tag="VHZ56_04135"
     CDS             1892..2536
                     /locus_tag="VHZ56_04135"
                     /inference="COORDINATES: protein motif:HMM:NF015510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer-membrane lipoprotein carrier protein LolA"
                     /protein_id="HEX4297189.1"
                     /translation="MLRRSVLALIATCLVLPAGAALAEGTDAPRALTQDEIDLVNAIS
                     AHNTAISTEVGKFFQIDTQGKRIEGTFYLQRPGKIRFRYAPPSHQEIISIGSGFYVID
                     REEKTQYAYPQDKVPLRQFLDQNIDLLHAGLVAIAQSAGYVSLTLQDDTPAGTVRVAL
                     VFDKDSKDLVQWVLTDPTGQTLTFSLYDVQQGVDIPKAMFYLNIGDYNQTQPNG"
     gene            2601..3401
                     /locus_tag="VHZ56_04140"
     CDS             2601..3401
                     /locus_tag="VHZ56_04140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008122170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEX4297190.1"
                     /translation="MPSLATWNINSVRLRLPLVLRFLRAHPVDVLCLQEIKCQNDQFP
                     ARKLAKAGYPHQAVHGQKGYHGVAIVSRHPLGDISSRVFCEIADCRHVSATLDFGTGP
                     LTVHSIYIPAGGDTPDPELNPKFRHKLGFLKELKDWFGEAHFKERQLICGDFNVAPHA
                     DDVWSHKQLLRVVSHTPVETAALDALLNGNHGWTDLVRRHIPYGEKLYSWWSYRAGDW
                     QVSDRGRRLDHIWATADVAARSTGAAIIRPARGWSKRPSDHVPVIAYF"
     gene            complement(3402..>3773)
                     /locus_tag="VHZ56_04145"
     CDS             complement(3402..>3773)
                     /locus_tag="VHZ56_04145"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX4297191.1"
                     /translation="ASERKKFRAGSVIYEPGEVPEGAHVLVSGTLATYQAGDEANPFV
                     ISTPGVVLGAVSLVVAKPRPVTVKAVDNVETLFVPRSAFLKLCNQAPELAARAADRIR
                     RELSGYLTAIEKVRPKIGSTK"
BASE COUNT          662 a         1406 c         1154 g          551 t
ORIGIN      
        1 accggcagcg agccgcgcgt cgccggggcc gcgccggaag tcagcctcgg cgccgatgcg
       61 cggcgcgagc cggccctcgg catcgaccgc cgctacaccg ccgccagcga gccggcgatc
      121 gaagacgact atccccccga agacgactat ccccccgagg acgacgccga catcgagatc
      181 gcgccggccc gccccgcccg catcgtcgcc ccggcgaagc gcccggcgcc cggtgcccgc
      241 gccgcgcgcg aggcccagcc ctcgctgctc gagaccgaat ccggcttcga attgccggcc
      301 ctcaacctcc tgtcggaagc caagcatcgc ggcctcgccg acgagcaccg gccggagcgt
      361 ctcgaggcca tggcccgccg gctcgagggc gtgctcgagg atttcggcgt ccgcggcgac
      421 atcatcaacg tccgccccgg cccggtggtg acgctctacg agctcgagcc cgctcccggc
      481 atcaagtcct cgcgcgtcat ctcgctggcc gacgacatcg cgcgctcgat gagcgccatc
      541 tccgcccgcg tcgcggtcgt ccccggccgc aatgccatcg gcatcgagct gcccaacgag
      601 aaccgcgaga ccgtctacct gcgcgagatg ctggccagcc aggacttcga gaagatgaag
      661 ggcaagctcc ccatctgcct cggcaagacc atcggtggcg agcccgtcat cgccgacctc
      721 gcgcgcatgc cgcatctgct gatcgccggc accaccggct ccggcaagtc ggtgggcatc
      781 aacaccttca tcctgtcgct gctttaccag atgacccccg agcagtgccg gctgatcatg
      841 atcgacccca agatgctcga gctgtcggtc tacgacggca tcccgcatct gctgaccccg
      901 gtggtgaccg atccggccaa ggccgtcacg gcgctcaaat gggcggtgcg cgagatggaa
      961 gaccgctacc gcaagatgag caagatcggc gtgcgcaaca tcgacggctt caaccagcgc
     1021 gtcggcgagg cggcgcagaa gggcgagacc atcacccgca ccgtgcagac cggcttcgat
     1081 cgcgagaccg gcgaggcaat ctacgagagc gagcagttcc agctcgagcc gctccccttc
     1141 atcgtcgtcg tcatcgacga gatggccgac ctgatgatgg tcgccggcaa ggatatcgag
     1201 ggcgccgtgc agcggctggc gcagatggcg cgcgccgccg gcatccacgt catcatggcg
     1261 acgcagcgcc cgtcggtcga cgtcatcacc ggcaccatca aggccaattt cccgaccaga
     1321 atttcgttcc aggtgaccag caagatcgac agccgcacca tcctcggcga gcagggcgcc
     1381 gagcagctgc tgggcaatgg cgacatgctc tacatggccg gtggcggccg catccggcgc
     1441 ctgcacgggc cgttcgtctc cgaccatgag gtggagggcg tcgtgcagca cctgaagagc
     1501 cagggcgccc ccgactacct cgattcgatc actgccgagg acgaggagtt cgatcccgaa
     1561 agcgccaccg gcgacggcga attcggcggc tccggcgacg agctctacga caaggcggtc
     1621 aacatcgtgc tgcaggacaa gaaggcctcg acctcctacg tccagcgccg actcgccatc
     1681 ggctacaacc gcgccgcgag cctgatcgag cgcatggaaa aggacggcgt catctcgccc
     1741 gccaaccact ccggcaagcg cgagatcctc gtcggctccg acgccggcta ctgagcatcg
     1801 gcccggatgc aaaccgggcg gcgtcgcatc ctaccggctc ttgccacaat tggcccgtag
     1861 cctgcggcgc aaatcgaccg aggatagcct gatgcttcga cgttccgtgc tggcgctgat
     1921 cgccacctgc ctggtcctcc ccgccggcgc tgcgctggcc gagggcaccg acgcgccgcg
     1981 cgccctgacg caggacgaga tcgatctggt caacgccatc tcggcgcaca acaccgccat
     2041 ctccaccgaa gtcggaaaat tcttccagat cgacacccag ggcaagcgca tcgagggcac
     2101 cttctatctg cagcgccccg gcaagatccg cttccgctac gccccgccga gccatcagga
     2161 gatcatctcc atcggcagcg gcttctacgt catcgaccgc gaggaaaaga cccagtacgc
     2221 ctacccgcag gacaaggtgc cgctgcgcca gttcctcgac cagaacatcg acctcctgca
     2281 cgccggcctc gtcgccatcg cccagtcggc cggctacgtc tcgctgacgc tccaggacga
     2341 caccccggcc ggcaccgtgc gggtggcgct ggtcttcgac aaggacagca aggacctcgt
     2401 ccagtgggtg ctgaccgatc ccaccggcca gacgctgacc ttctcgctct acgacgtgca
     2461 gcagggcgtc gatatcccca aggcgatgtt ctacctcaac atcggcgact acaatcagac
     2521 ccagcccaac ggttgagcac cgtgccgcgc ccgcgtcgga aagctgctga ctcggcggcc
     2581 gattgcaggc attgagggcc atgccttcgc tcgccacctg gaacatcaac tcggtccgcc
     2641 tgcgcctgcc gctggtgctg cgcttccttc gggcgcaccc cgtcgatgtg ctgtgcctgc
     2701 aggagatcaa gtgccagaac gaccagttcc cggccaggaa gctggcgaag gccggctacc
     2761 cgcaccaggc ggtgcacggc cagaagggct atcacggcgt cgccatcgtc tcgcggcacc
     2821 cgctcggcga catctcgagc cgggtcttct gcgagatcgc cgactgccgc cacgtctcgg
     2881 cgacgctcga tttcggcacc ggcccgctca ccgtgcactc gatctacatc cccgccggcg
     2941 gcgacacgcc ggaccccgag ctgaacccga aattccgcca caagctgggc ttcctcaagg
     3001 agctgaagga ctggttcggc gaggcgcact tcaaggagcg ccagctgatc tgcggcgact
     3061 tcaacgtcgc tccgcacgcg gacgacgtct ggagccacaa gcagctgctc cgcgtcgtca
     3121 gccacacgcc cgtcgagacg gcggcgctcg acgcgctgct caacggcaac cacggctgga
     3181 ccgacctggt acgccggcac atcccgtatg gcgaaaagct ctattcatgg tggagctacc
     3241 gcgccgggga ctggcaggtc tccgatcgcg gccgccggct cgaccacatc tgggcgaccg
     3301 cggacgtcgc ggcgcgctcg accggcgccg caatcatccg cccggcccgc ggctggtcga
     3361 aaaggccgtc agaccacgtc ccggtgatcg cctatttcta gctatttggt gctgccgatc
     3421 ttcggccgca ccttctcgat cgccgtcagg tagccgctga gctcgcgccg gatgcggtcc
     3481 gccgcccgcg ccgcaagctc aggcgcctgg ttgcagagct tcaggaacgc cgagcgcggc
     3541 acgaacagcg tctcgacatt gtccaccgcc ttgaccgtca ccggccgcgg cttggcaacc
     3601 accagcgaaa ccgcccccaa tacgactccg ggggtcgaaa tcacgaacgg attggcttcg
     3661 tcgcccgcct ggtaggtcgc gagcgtgccg ctgaccagca catgcgcgcc ctccggcacc
     3721 tcgcccggct cgtagatcac cgagccggcg cggaatttct tgcgctcgct ggc
//
LOCUS       DATAZA010000165         1618 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1294568, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000165 DATAZA010000000
VERSION     DATAZA010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1294568"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..115
                     /locus_tag="VHZ56_04150"
     CDS             <1..115
                     /locus_tag="VHZ56_04150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEX4297192.1"
                     /translation="ALARLVPAGHEPHIHLTITDDGGMAQAFVIIEALPGH"
     gene            172..963
                     /gene="lepB"
                     /locus_tag="VHZ56_04155"
     CDS             172..963
                     /gene="lepB"
                     /locus_tag="VHZ56_04155"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEX4297193.1"
                     /translation="MSQTSVTKAAKKANKNEFVDTIVVIVEALLIAVVFRTFIYQPFS
                     IPTASMQSTLMIGDYFVASKFEWGLGKFSFPFPLPFNGRILQFSEPQRGDIAVFHNEP
                     TDEDFIKRIIGLPGDRLQMKAGRLYINGTMLPREQVGTGQDKDSYNQTVPVIIYNETL
                     PNGVVHPIQEIDDNQPLDNTGEYVVPAGHYFMMGDNRDRSADSRVLSEVGFVPAGDLI
                     GKAEARFFSIKDDIPPWQFWTWPTSIRWDRMFQSVYQNYTSTPAP"
     gene            960..>1618
                     /gene="rnc"
                     /locus_tag="VHZ56_04160"
     CDS             960..>1618
                     /gene="rnc"
                     /locus_tag="VHZ56_04160"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEX4297194.1"
                     /translation="MIHRSRGHAKLEARLGYKFADPELLDRALTHSSAIAPAKRVAES
                     YQRLEFLGDRVLGLVVADMLYRRFAKANEGDLSRSLNALVRKETCAMIARELGLGAEM
                     NLGDSEARTGGAEKEAILGDVIEAVIGAVYVDGGLGPAFEIVERLFGEHIGQSGTERA
                     DAKTTLQEWAQGRGLEPPVYSEVARHGPDHAPEFTISVQLGQYDPLTASGPSKKLAEH
                     KA"
BASE COUNT          314 a          555 c          474 g          275 t
ORIGIN      
        1 ggccctggcc cgccttgttc ccgccggaca tgaaccacat atccacctga ccatcaccga
       61 cgatggcggc atggctcaag cctttgtcat catcgaagcg ttgcccggtc attgaccgtt
      121 cacctgctac ggcctaacca cacgcccgca tgggcccaga cgggaaaagc aatgagccag
      181 acttccgtga ccaaggctgc caagaaggcc aacaagaacg agttcgttga cacgatcgtc
      241 gtcatcgtcg aggcactgct gatcgcggtc gtcttccgca cctttatcta tcagccattc
      301 tccatcccga cggcatcgat gcagtcgacg ctgatgatcg gcgattactt cgttgccagc
      361 aagttcgagt ggggcctcgg caaattctcc ttcccgttcc cgctgccctt caacggccgc
      421 atcctgcaat tctccgaacc gcagcgtggc gatatcgcgg tgttccataa cgagcccacc
      481 gacgaggact tcatcaagcg catcatcggg ctccccggcg accgcctcca gatgaaggcc
      541 ggccgcctct acatcaacgg caccatgctg ccgcgcgagc aggtcggcac cggccaggac
      601 aaggacagct acaaccagac cgtgccggtc atcatctaca acgagacgct gcccaacggc
      661 gtcgtccacc cgatccagga aatcgacgac aaccagccgc tcgacaacac cggcgagtac
      721 gtcgtgccgg ccggccatta tttcatgatg ggcgacaatc gcgatcgatc cgccgacagc
      781 cgcgttctga gcgaagtcgg cttcgtcccc gcgggcgacc tgattggcaa ggcggaggcg
      841 cgcttcttct cgatcaagga cgacattcca ccgtggcagt tctggacctg gccgaccagc
      901 atccgctggg accggatgtt ccagtccgtc taccagaatt acaccagcac gccggctcca
      961 tgatccatcg aagcagggga cacgccaagc tcgaggcccg gttgggctac aagtttgccg
     1021 atcccgagct tctcgatcgc gcgctgaccc attcgagcgc catcgcgccg gcgaagcgcg
     1081 tcgctgaatc gtaccagcgc ctcgaattcc tcggtgaccg cgtgcttggg ctcgtggtcg
     1141 ccgacatgct gtatcggcgc tttgccaaag ccaacgaagg cgacctgagc cgctcgctca
     1201 atgccttggt gcgcaaggag acctgcgcca tgatcgctcg cgagctgggg ctcggagccg
     1261 aaatgaatct cggtgacagc gaggcccgca cgggcggcgc cgaaaaggag gcgatcctcg
     1321 gcgatgtcat cgaggcggtg atcggcgcgg tctacgtcga cggcgggctg gggccggctt
     1381 tcgagatcgt cgagcggctt ttcggcgagc acatcggcca gtccggtacc gagcgtgccg
     1441 atgccaagac gacgctgcag gaatgggcgc agggcagggg cctcgagccc ccggtctatt
     1501 ccgaggtcgc ccgccatggg cccgaccacg cgccggagtt caccatctcc gtccagctcg
     1561 gccagtacga tccgctgacc gccagcggcc cctccaagaa gctcgccgag cacaaggc
//
LOCUS       DATAZA010000166         1992 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2339437, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000166 DATAZA010000000
VERSION     DATAZA010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1992
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2339437"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(113..598)
                     /gene="moaC"
                     /locus_tag="VHZ56_04165"
     CDS             complement(113..598)
                     /gene="moaC"
                     /locus_tag="VHZ56_04165"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008547268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HEX4297195.1"
                     /translation="MSARLTHLNDKGEAHIVDIGGKAVTARRAVARARLEAEPATLDA
                     IMGGSLKKGDALAVARIAGIMAAKKTSELIPLCHPIALDSIELEIAREADGVLVLTAI
                     AATSDRTGVEMEAMTAAAVAALTLYDMAKGIDRGMRISTVELVEKSGGKSGTYLRDRD
                     R"
     gene            complement(595..1404)
                     /gene="trpC"
                     /locus_tag="VHZ56_04170"
     CDS             complement(595..1404)
                     /gene="trpC"
                     /locus_tag="VHZ56_04170"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007755068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HEX4297196.1"
                     /translation="MSDILQRIESYKREEIAAAKTLRPWDEVAAEAHDAPPVRRFLSA
                     LKRKREDGGYALIAEVKKASPSKGLIRADFNPAEIARSYELGGAACLSVLTDRPSFQG
                     APNYLIEARAATQLPALRKDFMFETYQVAEARAWGADCILIILAAVGDDTARYLLDAA
                     AEWRMDALVEVHDQIEMDRALALDAELIGINNRNLRTFETTLQTSIDLALGVPASTHL
                     VAESGISTHADVEGLQHRAGIGTFLVGESLMRQDDVTRATQLLLWGDKGRP"
     gene            complement(1407..1892)
                     /locus_tag="VHZ56_04175"
     CDS             complement(1407..1892)
                     /locus_tag="VHZ56_04175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297197.1"
                     /translation="MEGWTDFYVAAVGGAAALAGLLVVAVSINIVKIMSFPLLPGRAA
                     QTIITIGGALVIASVGLFPAQPVLVFGIETFVVSLCILTTGIRQFRAALLRRESGDPL
                     TWTLLPVLMDVVTQMPTFVGGALLIAGHDAGLYWIGAGIILSFISALENGWVLLVEIL
                     R"
BASE COUNT          317 a          614 c          731 g          330 t
ORIGIN      
        1 gcggtcaagg ggctcagcag cacccggcgg tgggcacggg cgagcgggac ggattcgggc
       61 agcggcgtcg ggatggtcgt gaagatgcgg tcgagcgcct cgtccaccgt gatcatctgt
      121 cacggtcccg caggtaggta ccggacttgc cgccggactt ttcgaccagc tcgacggtcg
      181 agatgcgcat cccccgatcg atccccttgg ccatgtcgta gagcgtcagg gcggcgacgg
      241 cggcggcggt catggcttcc atctcgacgc cggtgcgatc gctggttgcg gcgatggcgg
      301 tgagcaccag cacgccatcg gcctcgcggg cgatctcgag ctcgatgctg tcgagggcga
      361 tggggtggca gagcgggatc agctcggacg tcttcttggc ggccatgatg ccggcgatgc
      421 gggcgacggc gagggcgtcg cccttcttga ggctgccgcc catgatggcg tcgagtgtcg
      481 ccggctcggc ctcgaggcgg gcccgcgcca cggcacgacg cgccgtgacg gccttgccgc
      541 caatatcgac gatgtgggcc tcgcccttgt cgttgaggtg ggtgagcctg gcgctcacgg
      601 gcgacccttg tcgccccaga gcagcaactg ggtggcgcgc gtcacgtcat cctggcgcat
      661 caggctctcg ccgacgagga aggtgccgat gccggcgcgg tgctgcaggc cctcgacgtc
      721 ggcgtgggtc gagatgccgc tctcggccac cagatgggtc gaggcgggga cgccgagcgc
      781 gaggtcgatg gaggtctgga gcgtcgtttc aaacgtccgc aggttgcggt tgttgatgcc
      841 aatgagttcg gcgtcgaggg cgagggcgcg gtccatctcg atctggtcgt gcacctcgac
      901 cagcgcatcc atccgccatt cggcggcggc atcgagcagg tagcgcgcgg tgtcgtcgcc
      961 gacagcggcg aggatgatga ggatgcaatc ggcgccccag gcgcgggcct ctgccacctg
     1021 gtaggtctcg aacatgaagt ccttgcgcag cgccggcagc tgggtggcgg cacgggcttc
     1081 gatcagatag ttcggggcgc cctggaagct cgggcgatcg gtgagcaccg agaggcaggc
     1141 cgcgccgccg agctcgtagc tgcgggcgat ctctgcagga ttgaaatcgg cccggatgag
     1201 gcccttggag gggctggcct tcttgacctc ggcgatgagg gcgtagccgc cgtcctcgcg
     1261 cttgcgcttg agcgccgaga ggaagcgccg gaccggcggg gcgtcgtggg cttcggccgc
     1321 cacctcgtcc cacggacgca gggtcttggc ggcggcgatt tcctcgcgct tgtaggattc
     1381 gatgcgttgc aggatgtcgg acatggctag cgcaggattt ccacgaggag gacccagccg
     1441 ttttcgaggg ccgagatgaa gctgagaatg atgcctgccc caatccaata gagcccggca
     1501 tcgtgaccgg caatcagcaa ggcaccgccg acaaacgttg gcatttgcgt aacgacgtcc
     1561 atcaacacgg gcagcagcgt ccaggtgagc ggatcgccgg actcgcggcg aagcagggct
     1621 gcccggaact ggcggatgcc ggtggtcagg atgcagagcg atacgacgaa tgtctcgatg
     1681 ccgaaaacca gcacgggttg ggccggaaac agtccaacgc tggcgatgac cagcgcaccg
     1741 ccgatcgtga tgatggtctg cgcggcccgg ccgggcagca gcgggaacga cataatcttt
     1801 acgatgttga tgctgaccgc gacgacgagc aggccggcaa gggccgcggc gcccccgact
     1861 gccgccacgt agaaatcggt ccagccttcc attaccgcct caggagttgc tgaccgagat
     1921 cagtttttcg agcgtcgcct tggcccggcc gctgtcgatc tcgcgcgccg cgaggtcggc
     1981 gccgagcttc ag
//
LOCUS       DATAZA010000167         2780 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2803550, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000167 DATAZA010000000
VERSION     DATAZA010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2780)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2780)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2780
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2803550"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1840)
                     /gene="glnD"
                     /locus_tag="VHZ56_04180"
     CDS             complement(<1..1840)
                     /gene="glnD"
                     /locus_tag="VHZ56_04180"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0018177 - protein uridylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HEX4297198.1"
                     /translation="MPLAEAELRSKKPQFHLQSAETILAEVATALGQDSPKSAAARSA
                     VLALMRKTLAAARNSAEAELMATGHGTRCAQNLSAAEDEIIRAIHLFATRHVYPVDNP
                     SGAEAISIAAVGGYGRGTLAPGSDIDLLFILPYKQTPWGEQITEYILYMLWDLGQKVG
                     HAVRSVDDCIRMARADMTVRTATLEARYLTGDRTLFDQLQKRFETEIMPRTGPEFIQA
                     KMAEREERHKQTGNTRYVVEPNIKDGKGGLRDLHTLFWIGKYFYQVKTSAELVDKGVL
                     SADEYRLFQRAENFLWAIRCNLHFLTGRADEKLTFDVQPELAARLRFADRPGMLGVER
                     MMKRYFLVAKDVGDLTRIFCTSLEFDHAKPLDMLGRVTGIFKRGRVAIKGEPDFVIDS
                     GRLNTARPDTFEQHPLALIRSFLVAGRNDLLFHPDAIKQITRSLHLIGHDVRNDRGAN
                     DWFLEILTSPRTVERILRQMNESGVLGRFVPEFGKIVALMQFNMYHHYTVDEHLIRAV
                     GVMAEIANGGLRQELPLTHELLPSLNDTRLLYVALFLHDIAKGRPEDHSIAGARIARK
                     FCPRLGLDPAETDTVAWLIEYHLLMSEVAQSRDIQDPETAKAFADVV"
     gene            complement(1821..>2780)
                     /locus_tag="VHZ56_04185"
     CDS             complement(1821..>2780)
                     /locus_tag="VHZ56_04185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007199837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEX4297199.1"
                     /translation="ADALAELDVTAALAQLAATRGLVRPTVDNSLDFTIAGGRHPVVE
                     TNVAAAGQPFVANDIELSGGALWLVTGPNMGGKSTFLRQNALIAILAQIGSFVPADAA
                     RIGVVDRVFSRVGASDDIARGRSTFMVEMVETAAILNRATARSLVILDEIGRGTATFD
                     GLSIAWAAVEALHDDTGCRVLFATHFHELTALAGHLPRVRNVTMAVREWQNEVVFLHE
                     VVPGAADRSYGIQVARLAGLPETVLARARHVLGVLESRSSGHSAPMLDDLPLFRAAPP
                     PKKPDVNPLDAMLDQLRPDELSPREALDLVYELKKARDAARRS"
BASE COUNT          441 a          827 c         1053 g          459 t
ORIGIN      
        1 ggaccacgtc ggcgaaggcc ttggcggttt cggggtcctg gatgtcgcgg gactgggcga
       61 cttcgctcat cagcaggtgg tattcgatga gccaggcgac ggtgtcggtc tcggccggat
      121 cgagccccag tcgcggacag aatttgcgtg cgatgcgggc gcccgcaatg gaatggtctt
      181 ccggccggcc cttggcgatg tcgtggagga acagcgccac gtagagcagg cgcgtgtcgt
      241 tgagcgaggg cagcagctcg tgggtaagcg gcagctcctg ccgcaagccg ccattggcaa
      301 tctcggccat cacgccgacg gcgcggatca ggtgctcgtc caccgtatag tggtggtaca
      361 tgttgaactg catcagcgcg acgatcttgc cgaactcggg cacgaagcgg cccagaacgc
      421 cgctctcgtt catctggcgc aggatgcgct cgacggtgcg cgggctggtc aggatttcga
      481 ggaaccagtc attggcgccg cggtcgttgc gcacgtcgtg gccgatgagg tgcagcgagc
      541 gggtgatctg cttgatggca tcgggatgga acagcagatc gttgcggccg gcgacgagga
      601 agctgcggat cagggccagc ggatgctgct cgaaggtatc ggggcgggcg gtgttgagcc
      661 ggccggaatc gatgacgaag tcgggctcgc ccttgatggc gacgcggccg cgcttgaaga
      721 tgccggtgac gcggccaagc atgtcgagcg gcttggcgtg gtcgaattcg agcgaggtgc
      781 agaagatgcg cgtcaagtcg ccgacatcct tggcgacgag gaaatagcgc ttcatcatgc
      841 gctcgacgcc gagcatgccg ggccggtcgg cgaagcgcag gcgggcggcc agctcgggct
      901 gcacgtcgaa ggtcagcttc tcgtcggcgc ggccggtgag gaaatgcagg ttgcagcgga
      961 tcgcccagag gaagttctcg gcgcgctgga acagccggta ttcgtcggcg ctgagcacgc
     1021 ccttgtcgac cagctcggcg ctggtcttga cctggtagaa gtactttcca atccagaaca
     1081 aagtgtgcag atcgcgcagc ccgcccttgc cgtccttgat gttgggctcg acgacatagc
     1141 gggtgttgcc ggtctgcttg tggcgctcct cgcgctcggc catcttggcc tggatgaact
     1201 cgggaccggt cctgggcatg atctcggtct cgaagcgctt ctgcagctgg tcgaacagcg
     1261 ttctgtcgcc ggtcagatag cgggcctcga gggtggcggt gcgcaccgtc atgtcggcgc
     1321 gcgccatgcg gatgcagtcg tcgaccgagc gcaccgcgtg gccgaccttc tggccgaggt
     1381 cccagagcat gtagaggatg tattcggtga tctgctcgcc ccagggggtc tgcttgtagg
     1441 gcaggatgaa cagcaggtcg atgtcggagc ccggcgccag cgtgccgcgg ccgtagccgc
     1501 cgacggcggc gatcgagatg gcctcggcgc cggaggggtt gtcgaccgga tagacgtggc
     1561 gggtggcgaa caggtggatg gcgcggatga tctcgtcttc ggcggcgctc aaattctggg
     1621 cgcagcgggt gccgtggccg gtggccatca gctcggcctc cgccgaattg cgggccgcgg
     1681 cgagggtctt gcgcatcagc gccagcacgg ccgagcgggc ggcggcggat ttcggcgaat
     1741 cctggccgag cgccgtcgcg acctcggcga ggatcgtctc ggcggattgc aggtggaact
     1801 gcggcttttt cgagcggagc tcagcttcgg cgagcggcat cgcgggcctt cttcaactcg
     1861 tacaccaggt ccagcgcctc gcggggggag agttcatcgg ggcggagctg gtcgagcatc
     1921 gcatcaagag gattaacgtc cggctttttc ggcggaggcg ccgcccggaa cagcggcaga
     1981 tcgtctagca tgggcgccga atggccggaa gagcggcttt cgagcacacc cagcacgtgg
     2041 cgggcgcggg cgaggaccgt ttcgggcagc ccggcaaggc gggcgacctg gatgccgtag
     2101 gagcggtcgg cggcgccggg caccacttcg tgcaggaaga ccacctcgtt ctgccattcg
     2161 cggacggcca tggtgacgtt gcggacccgc ggcagatggc cggcgagcgc cgtcagttcg
     2221 tggaaatggg tggcaaacag cacccggcag ccggtgtcgt cgtgcagcgc ctccaccgcc
     2281 gcccaggcga tcgacagccc gtcgaaggtg gcggtgccac ggccgatctc gtcgaggatg
     2341 accagcgagc gggcggtggc gcggttgagg atggcggcgg tttcgaccat ctcgaccatg
     2401 aaggtcgagc ggccgcgggc gatgtcgtcg gaggcgccga cgcgcgagaa gacgcggtcg
     2461 acgacaccga tccgcgccgc atcggccggc acgaagctgc cgatctgggc gaggatggcg
     2521 atcagcgcgt tctggcggag gaacgtcgat ttgccgccca tgttggggcc ggtgaccagc
     2581 cacagggcgc cgcccgacag ctcgatgtcg ttggcaacga agggctggcc agcggcggcg
     2641 acgttggtct cgaccaccgg gtggcggccg ccggcgatgg tgaaatcgag cgaattgtcg
     2701 accgtcggac gcaccaggcc gcgggtcgcc gcaagctgcg ccagggccgc cgtgacgtcg
     2761 agctcggcca gcgcatcggc
//
LOCUS       DATAZA010000168         2972 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3847591, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000168 DATAZA010000000
VERSION     DATAZA010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2972
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3847591"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..1079)
                     /locus_tag="VHZ56_04190"
     CDS             complement(147..1079)
                     /locus_tag="VHZ56_04190"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX4297200.1"
                     /translation="MPIGVLLALLAYSTYSVGDSIIKSVGTGSMSVFELGVFINLFAL
                     ISAPFARTRDDRWAEIFRYRHPVLMNARAFLYTVATILFTYSVTSIPLAETYSLAFLA
                     PLFLTFLSAVVLKEKVPVSRALLVALSFVGVLIVVRPGFREIGLGHIAALGCAITAAS
                     SNTILRIISNRERQVSIIVLNGVYQIVLNAGLMLFGGFVVPTLADLVLLAVVGLLYGT
                     AQILFIRGMARAPASHIGPTQYVQILWGVVIGAIFFGEHQDLVGYTGLVLLVVAGVAT
                     IFSDGAQARISGRWAEFRARRGEPVNNRVEGPDL"
     gene            1291..2580
                     /locus_tag="VHZ56_04195"
     CDS             1291..2580
                     /locus_tag="VHZ56_04195"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008936231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEX4297201.1"
                     /translation="MANVIVVGSQWGDEGKGKIVDGLSERADVVVRYQGGHNAGHTLV
                     IDGTSYKLALLPSGVVRGKLSVIGNGVVVDPHHFVEEVAKLGAQGIKVTPEILRIADN
                     APLILSLHRELDAIRENSNSGLKIGTTKRGIGPAYEDKVGRRAIRVCDLAEPDTLPAK
                     IERLLAHHNALRRGMGLSEISAESLRQELLAVADQILPYVGQVWRLLDEKRRAGARIL
                     FEGAQGALLDNDHGTYPFVTSSNTVAGQAAAGSGLGPTAIGYVLGITKAYTTRVGEGP
                     FPCELNDEIGRHLSTVGREVGVNTGRPRRCGWFDAVLVRQTVRTSGITGIALTKLDVL
                     DGLKEIKVCVGYELDGQKIDYLPASMRAQAAVKPVYESLEGWSETTAGARSWAELPAQ
                     AVKYVRYIEELIGAPVAMLSTSPERLDTILVQDPFQD"
     gene            2626..>2972
                     /locus_tag="VHZ56_04200"
     CDS             2626..>2972
                     /locus_tag="VHZ56_04200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297202.1"
                     /translation="MADYKELLRRAVEALPENNGAARRAVYEKARAALVGQLRAINPP
                     LPARDITTHRLQLEDCIRQVEQEASEANIAGIGQEQAPPTLPPVFASEAKAKPAPKAA
                     AEPPRARADSPKAT"
BASE COUNT          603 a          911 c         1014 g          444 t
ORIGIN      
        1 ggagccgtca tcctcaccgt cgccttcgtg atcaagctca ggctcgagga gaagttcctg
       61 atgcaggaac ttggcgccga agcctacgag gcgtaccggc ggcgcgtgcc ggcgctggtg
      121 ccgttctggc ctacggcatc gagcacctag aggtccgggc cctcgacgcg gttgttcacc
      181 ggctcgccgc gacgggcgcg gaattccgcc cagcgtcccg agatgcgtgc ctgcgcgcca
      241 tcggagaaga tcgtcgccac gccggcgacg accagcagca cgagcccggt gtagccgacc
      301 aggtcctggt gctcgccgaa gaagatcgcg ccgatgacca cgccccagag gatctggacg
      361 tactgggttg gaccgatatg gctcgccggc gcgcgcgcca tgccgcggat gaacaagatc
      421 tgcgccgtgc cgtagagcag gccaaccacg gcaagcagga cgaggtcggc gagcgttggc
      481 accacgaagc cgccgaacag catcaggccg gcgttcagaa cgatctggta gacgccgttg
      541 agcacaatga tgctcacctg ccgctcgcga ttggagatga tccggaggat cgtgttggag
      601 ctcgcagcgg tgatcgcgca gccgagggca gcgatgtgac cgaggccaat ctcgcgaaag
      661 ccggggcgca cgacaatcaa cacgccgacg aagctcagcg cgaccagaag cgcccggctt
      721 accggaacct tttccttgag cacgacggcg gaaaggaacg tcaggaacaa cggggcaagg
      781 aaggcgaggg agtaggtctc ggcgagggga atgctggtga cggaataggt aaacaggatc
      841 gtcgccacgg tgtagaggaa ggcgcgcgca ttcatcagca caggatggcg atatcgaaag
      901 atttcggccc agcggtcgtc cctggtgcgg gcaaaagggg ccgaaatcag cgcaaacaga
      961 ttgatgaaga cgccaagctc gaacaccgac atcgagccgg ttccgacgct cttgatgatg
     1021 gagtcaccaa ccgaataggt cgagtaggcg aggagcgcga gaaggacgcc gatgggcatg
     1081 atgtgaaccc ggaaggtggc tagcctctat ccgaggcccc gaccggtgtc gatggcgcaa
     1141 acgggccagt ctgcgcgccg gtcggcaggt cgaccccgac gacgatccac cggacgatca
     1201 tcaaggtctt gcgggcttcc gccgggggcc ttatcagcat acgcccaatg gtcaaaaccc
     1261 ggccgcgggc gggagcgaca aagtcctgac atggccaatg tgatcgtcgt cggcagccaa
     1321 tggggtgacg agggcaaggg caagatcgtc gacgggctga gcgagcgcgc cgatgtggtg
     1381 gtacgctacc agggcggcca caacgccggg cacacgctgg tgatcgacgg gaccagctac
     1441 aagctggcgc tgctgccctc aggcgtggtg cgcggcaagc tgtcggtgat cggcaatggc
     1501 gtggtggtcg atccgcacca tttcgtcgag gaggtcgcca agctgggcgc ccagggcatc
     1561 aaggtcacgc ccgagatcct gcgcatcgcc gacaacgcgc cgctgatcct gagcctccat
     1621 cgcgagctcg atgcgatccg cgaaaactcc aattcggggc tcaagatcgg caccaccaag
     1681 cggggcatcg gtccggccta cgaggacaag gtcgggcgcc gcgccatccg ggtgtgcgat
     1741 ctcgcggagc ccgacacgct gccagccaag atcgagcggc tgctcgccca ccacaacgca
     1801 ttgcggcgcg gcatgggcct cagcgagatc agtgccgaaa gcctgcggca ggagttgctg
     1861 gcggtcgccg accagattct cccttatgtc gggcaggtct ggcggctgct cgacgagaag
     1921 cggcgcgccg gcgcccgcat cctgttcgag ggcgcgcagg gggcgctgct cgacaacgat
     1981 cacggcacgt acccgttcgt cacctcgtcc aacacggttg cgggtcaggc ggcggcaggt
     2041 tcgggactcg ggccgacggc gatcggctat gtgctgggaa tcaccaaggc ctacaccacc
     2101 cgggtcgggg aggggccgtt cccgtgcgag ctcaacgacg agatcggccg gcacttatcc
     2161 acagttggtc gcgaggtcgg agtgaacacc ggacggcccc ggcgctgcgg ctggttcgac
     2221 gccgtcctgg tgcgccagac agtccgcact tcgggaatta ccgggatcgc gctgaccaag
     2281 ctcgacgtgc tcgatggact caaagagatc aaagtttgtg tcggctatga gctcgacgga
     2341 caaaaaattg actatttgcc ggcctctatg agggcccagg ccgccgtaaa gccggtctac
     2401 gaatctcttg aggggtggtc agaaacgaca gcaggggcgc ggagctgggc cgagttgcca
     2461 gctcaggccg tcaagtacgt gagatatatc gaagaactga tcggcgcgcc ggtggccatg
     2521 ttgtccacca gtcccgagcg tttggacacg atcctcgtgc aagacccgtt ccaagactga
     2581 tgttttttgg ctacaagacg cacacaaatt gagcgaatgt agcgaatggc ggattacaaa
     2641 gagcttttgc gccgggcggt agaggccctg cccgaaaaca acggggctgc acggcgcgcc
     2701 gtgtacgaga aggcgcgagc ggctctggtt ggccagctcc gcgccatcaa cccgcctttg
     2761 ccggctcgcg atatcaccac ccaccgcctg cagctcgagg attgcatccg tcaggtcgag
     2821 caggaggcga gcgaggccaa tatcgccggc atcgggcagg aacaggcgcc gccgacgctg
     2881 ccgccggtgt tcgcatcgga ggccaaggcc aagccggcac cgaaagcggc tgccgaaccg
     2941 ccgagggcca gggctgattc gcccaaggcg ac
//
LOCUS       DATAZA010000169        14567 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1874648, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000169 DATAZA010000000
VERSION     DATAZA010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 14567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14567
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1874648"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2739
                     /locus_tag="VHZ56_04205"
     CDS             <1..2739
                     /locus_tag="VHZ56_04205"
                     /inference="COORDINATES: protein motif:HMM:NF024893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA-like C-terminal region-containing protein"
                     /protein_id="HEX4297203.1"
                     /translation="SSYTALPDENRSATRLTGAVELKLGQGLAFNAVISGGVIALPPR
                     DATTELTDPPYELVRLLGETPLPPIPDIAGTVGLDISELNLRAVSLRDLRLDAATDGK
                     SWAIKDFSGTLPGGTKVGLSGALSADNGHPTFVGALKLDTDRLDMLAQLWRKPSADNP
                     LYNLAGSLSADVALSGDTLALSSGKLVIDGVNQGFDAAIGFAQTRQLKLDAHLTTVGA
                     EESAAIIALLPDVSAGGAFGATFPKGEIDVAADKAELFGLDGTDLAAAATWDGGVLEF
                     SKLSAGDLGGLSIDAKLTAFGTLAKPELSGSAAVKLASAAPAFSAAMAALNTPRPVAD
                     FLERSLPADVNVSLDAPAGDGGQTLSVTGKLGAATTTLSSKLTAGVVNALVAPITASL
                     DLKSQSALLLTRQLGLGDTPLFGSDKTPLHVALSLEGAPSNSYQTHLRLESGDDHLAF
                     DGDVIPGDFSKIAGTGNIEARIADPSPLLATLGAGGLYLPAVAGTARLAFDGLGGAEL
                     AAIDASGVSGDLAMSRQDSTTQVSGTLALPAIDTQGLLPLLVGAAGTVPGSGLWPDGP
                     IDIGSGARRSTGRIDLTAASISAGGKPLLGKSSFGFDWDDKSVHLRDLSGPLSSGTLT
                     LDATVCCSTGSLPVKEVSGRVALAGAAVAAIAPPAVAADIKGAVDATAAFDGTGASLA
                     DAVAAMTGTGSYTINGFSAKGLDPGIFDAAGKLTGVAEMAPDLLSNTLADKLAGAPFT
                     APQVTGSFTIAGGVLRNPNLEIVGAGSRIFGSASLGLADLALDARYTLSPTGTPDPSN
                     AVDPATAEVTAAAKGPLWAPVGSYDVSALADGMKIKANELELAVLEQRKAEADARAKA
                     EADAAARLAILAPGEAIATAGAARKAADDETARKAADDAAKQKAATAIAASNDLGL"
     gene            complement(2728..2937)
                     /locus_tag="VHZ56_04210"
     CDS             complement(2728..2937)
                     /locus_tag="VHZ56_04210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HEX4297204.1"
                     /translation="MHKRSLTIAGHRTSIALEPEFWSGLEVIAARRGIRLVELIEELD
                     RDRKGPNLSSALRVAVLADARQLKP"
     gene            complement(2941..3429)
                     /locus_tag="VHZ56_04215"
     CDS             complement(2941..3429)
                     /locus_tag="VHZ56_04215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013531016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SspB family protein"
                     /protein_id="HEX4297205.1"
                     /translation="MAQDHIRYDILTQEALRGVVRKVLSEVARTGLPGEHHFFISFVT
                     KAPGVRVSQRLLDQYPTDMTIVLQNQFWDLKVSEAGFEVGLSFDDKPETLVIPFTAIK
                     GFFDPSVQFGLQLTGAVPLPTEDEKAEAVEPAKLPTAPPAAVVAEKPGEKVVSLDAFR
                     KK"
     gene            complement(3547..3902)
                     /gene="ssrA"
                     /locus_tag="VHZ56_04220"
     tmRNA           complement(3547..3902)
                     /gene="ssrA"
                     /locus_tag="VHZ56_04220"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01849"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="alphaproteobacterial-type; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF01849"
     gene            4000..4950
                     /locus_tag="VHZ56_04225"
     CDS             4000..4950
                     /locus_tag="VHZ56_04225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297206.1"
                     /translation="MTTQIIAILHLEDVGGSHVNLRSRRGPLETFLLCAVTCAKSFAE
                     QGLPFLLLTDQPERLRNCGRALGLAESALPAIEHYPFKLDVPPGIRFRGAHFRLELIE
                     AIAEGTFGQQCAILDVDAVAIAPFPELALGDADLVAYKLPDVGTPRGGLNILRDIERL
                     TGVRPAAPCWYGGELLAGRASAFGRLVPTLRTAWDRYRADVESFHYIGSEMVWNAMLQ
                     ATPDINVIDAGYAGLLARWWSTRGRAEQVPFDVARRSAILHLPADKALLSNWARRPFE
                     AEAFLIAYERHLRGEIAKGHLGNLLRRLKGQQQRPVPHLH"
     gene            5042..5884
                     /locus_tag="VHZ56_04230"
     CDS             5042..5884
                     /locus_tag="VHZ56_04230"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010910188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004799 - thymidylate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEX4297207.1"
                     /translation="MPAFAAARETIDPQRSERQYLDLLRTVLETGVDRPDRTGTGTRS
                     IFGRQMRFDLVDGFPLLTTKKLHLKSIIYELLWFLRGETNVRWLQEHGVKIWDEWASE
                     SGDLGPVYGSQWRSWPDGEGGTIDQIANVVDSIRSKPESRRHIVTAWNPAEVDEMALP
                     PCHCLFQFYVAEGRLSCQLYQRSGDVFLGVPFNIASYALLTLMVAQVTGLQPGEFVHT
                     FGDVHLYSNHVQQAREQLQRTPKPLPRMTLNPDRRSIFDFEYEDFMLTGYDPDPHIKA
                     PVAV"
     gene            5881..6912
                     /locus_tag="VHZ56_04235"
     CDS             5881..6912
                     /locus_tag="VHZ56_04235"
                     /inference="COORDINATES: protein motif:HMM:NF025772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4424 domain-containing protein"
                     /protein_id="HEX4297208.1"
                     /translation="MKRSVVALGLALLTAPALANDTTSQLGTGGLVFVTNQDISMDSE
                     DLSVGPNQVKVVYQFTNTSRTEQHVLVAFPLPDITGDGDFMVAVPNEDPRNLFGFITT
                     FNGQPVQSTLHQYAFAVGIDQTALLKSLNVPLAPFGKATIDAINALPDTDHQQLLHLG
                     MVIPMTYDAGNGEQTDWTPVWTLKSTYSWEADFKAGQTAQVVHAYTPSVGSTVATTFL
                     EPPTDATQEDRPKEYRDKYCTDDDLIRTLKKSLRDPGDLNSAPYQERWISYVWSTGAN
                     WSGPIGKFHLTIDKGDPKDLVSFCWGGKVTKTGPTKFEMNATDWYPPEGRELEILILA
                     HQDASSNAG"
     gene            6916..7395
                     /locus_tag="VHZ56_04240"
     CDS             6916..7395
                     /locus_tag="VHZ56_04240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4297209.1"
                     /translation="MNLVVRDAQPGDAALIVQFIRDLAEYERLSHEAKATETDIGREL
                     FGPNPRVFCQIAERDGRPAGFALWFYTFSTFVGRHGIWLEDLFVDPEMRGGGVGKALL
                     ADLARRCVREGLGRFEWAVLDWNRPSIDFYAAQGAVFMDDWRRCRVTGDALSRLGAT"
     gene            7392..7916
                     /locus_tag="VHZ56_04245"
     CDS             7392..7916
                     /locus_tag="VHZ56_04245"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEX4297210.1"
                     /translation="MSVAVALIAAVAANGVIGSGNAIPWYLPSDFAHFKRMTRGKPLI
                     MGRKTFESIGRPLPGRTNIIVSRQEGYQPDGVIVISSLEAALEHAQSIANDDRANEVM
                     IGGGAEIYSQALPIADRLYITHVGLEPVGDAYFPSVTQDQWVDGGLIDVRPDPRDTAA
                     FRIRVYRRRPNSRR"
     gene            8010..9164
                     /gene="hflK"
                     /locus_tag="VHZ56_04250"
     CDS             8010..9164
                     /gene="hflK"
                     /locus_tag="VHZ56_04250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019996399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HEX4297211.1"
                     /translation="MPWDNTTGGGGRNNSGGPWGQAPQGGGGGGGNGPRRGGTPSLED
                     ILSRGRDRFRGGLPGGSRWAIAGGVAIIVVFWLFNSVYTIDPQEVGVETTFGKPSDDL
                     STSGLHFLWWPIQAVERVNIAQNKTEIGSVNNHTGGNDDGVMLTSDQNIVDAKFSVLW
                     TITDPKAYLFDVKDPDDMVRAAAESAMREVVGRSPATEVFRSDRAGIQTEVQQIIQSI
                     VDNYKLGVHIDQINVEDVAPPEEVADAFSEVQRAQQDQQKYQEDARTDANTLLGNARG
                     QAAKVRQDAAAYKSQVVQTAEGEAARFISVYNQYVKAPEVTRERLYLETMEQVLANAN
                     KVVIAPGTSGAGGVLPYLPLPSLQPKTTDTTTTPSSPSVATPASSSSAED"
     gene            9168..10259
                     /locus_tag="VHZ56_04255"
     CDS             9168..10259
                     /locus_tag="VHZ56_04255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007068831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HEX4297212.1"
                     /translation="MNRLIAAGVGVVVVLYLLFSSIYIVDVREQAIVLRFGQITAVRN
                     EPGLYFKLPTNFVDTVQVIENRLLRYDIANMQVQVSDGAKYVVDAFLTYRIADPVLFR
                     QRLQGDLDLAEQRIATRFDSALRQVYGTRKFDAALSAERPAMMLEARDLIGPGMAELG
                     IDVTDVRILRTDLTPDVSKNTFERMSAERFAQAAAIRADGQQAAASIRAIAGRQAIEI
                     AASANKDSEILRGEGDAQRGQIYAAAYGADPEFFDFYRSLQSYRTALGSTGTTMVLSP
                     DSDFFKYFKADTTSGTVPPPASPNGIATLPSTELSVPEPSDVLPPTNVGAPGTDDAGA
                     AANAALLPSTPGDLASSSIAPPPSTSSAQ"
     gene            10390..11853
                     /locus_tag="VHZ56_04260"
     CDS             10390..11853
                     /locus_tag="VHZ56_04260"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007196692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HEX4297213.1"
                     /translation="MRVSAVRAIVAAALLALATVSPVLADGPQSVAKLAARLSPAVVN
                     IATSKMVGGGGEEFPTAPQGSPLSQMFDDVNPNKGQGPQAEEEARSLGSGFIISADGV
                     IVTNNHVIDGADDIQVFLTDGTRLTAKVVGADDKADLAVLKVEAGHPLPFVQLGDSDT
                     AEVGDWVMAIGNPFGLGGSVTLGIVSARDRDIQEGPYDDFIQTDAAINEGNSGGPLFD
                     MNGKVVGINTAIIARGGSSLGIGFAVPVNLARPVIEQLHEYGETRRGWLGVGIQDLTP
                     EMAASLGRPNSGGALVVDVTKAGPADGLVREGDIILAFNGKTIEKMKDVPRLVAETAV
                     GQKVRVLLLREGKEVGVDVTLGRLETGPQQTAAATSEPSTPGPDVDEPVGPPPGLKDM
                     LGIDLGPIDDAARGTYDLGTGIGGIVITEVTKGSDAEKQGLVAGLVVSEVNQQKVETV
                     ADVTEKVNAAKEAGRPAVLLKVTDGAGNSRFVAVRLN"
     gene            complement(11857..12732)
                     /gene="serB"
                     /locus_tag="VHZ56_04265"
     CDS             complement(11857..12732)
                     /gene="serB"
                     /locus_tag="VHZ56_04265"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036424 - L-phosphoserine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HEX4297214.1"
                     /translation="MSVLCLIANPADPALDSALVAAVLNEVGGELNWLHQRIACEIVK
                     PKLPDAATAARALVAARPIDVALVPLAHRRKRLLVADMDSTMIEEECIDELADAVGIK
                     AEIAAITARAMNGELDFAQALRTRVALLKGLPLKRIEEVRREQITFAPGGRVLVQTMK
                     THGAFTALVSGGFTFFADYFAKRIGFDEAMANVLEFDGDRLAGTVAEPIVGKEAKLNR
                     LETLTAKLAIPAAATLAVGDGANDLDMIRAAGLGVALHAKPVVAAEAQVRIDHGDLTA
                     LLYLQGYSDDDFIHG"
     gene            12742..13617
                     /gene="miaA"
                     /locus_tag="VHZ56_04270"
     CDS             12742..13617
                     /gene="miaA"
                     /locus_tag="VHZ56_04270"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEX4297215.1"
                     /translation="MAGGRRAVLIAGPTASGKSALALTVAAEAGGVIVNADALQVYDG
                     LHLLTARPGTDDLASAPHRLYGTVSPDQRFSTGDWVRAVARVIDEDKPLVFVGGTGLY
                     FEALTKGLAMVPSVPPEAVAWATAQVAGLSREERGRLIAERDPETARRLKAPDPQRVI
                     RALAVQRATGRSLATFQDAPQSGLLAGWTLEKIVLAPSRDVLRERIARRFFRMLEEGA
                     AEEAQVFLTRGLDPSLPAMKAIGLREIGEWLAGRSTHEEMMERAVTATRQYAKRQRTW
                     FRNRMADWEWREPAG"
     gene            complement(13614..>14567)
                     /locus_tag="VHZ56_04275"
     CDS             complement(13614..>14567)
                     /locus_tag="VHZ56_04275"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEX4297216.1"
                     /translation="FPAFFIVVFRSFLAAHGATRIILWITVAGVVVNAAGDYGLIFGN
                     WGMPRLGLAGAGISTTTVNVVMLAMMVAYILTRRRFRRYHVFHHFFRADWPRFIELWR
                     IGLPIGLMSLAEVGLFTFASLLQGWISEDSVAAHAIGLTLASISFMVPLGLSQAATVR
                     VGIAMGAGNPDGVRKAGWAALLVTLVFMSTTAAIFLLLPRTLVGLFLDPTNPANAGTV
                     ALATSFLVVGGFFQLFDGTQVAMAATLRGLSDTSMPLVIALVGYWLVGFPVAYVLAFP
                     LGLKGVGIWIGLASGLAAVALVLTLRFALRDRLGLTSRSPI"
BASE COUNT         2589 a         4673 c         5007 g         2298 t
ORIGIN      
        1 tccagctaca ccgcgctgcc cgacgagaat cggtcggcga cgcggctgac cggcgcggtc
       61 gagctcaagc tcgggcaggg actggcgttc aacgcagtga tttcgggcgg cgtcatcgca
      121 ctgccgccgc gcgatgcgac gaccgaactg accgatccgc cctacgagct ggtgcgactg
      181 ctcggtgaga caccgctgcc gccgatcccg gatattgcgg gcaccgtggg gctcgacatc
      241 agcgagctca acctgcgggc ggtgtcgttg cgcgatcttc ggctcgatgc ggcgacggat
      301 ggaaagagct gggcaatcaa ggatttctcg ggaactctac cgggcgggac gaaggtgggt
      361 ctcagtggtg cactcagtgc cgacaacggc catccgacct tcgtgggagc gctcaagctc
      421 gacaccgatc gcctcgacat gctggcgcaa ctctggcgca agccatcggc cgacaatccc
      481 ctctacaatc tcgcgggttc gctcagcgcc gacgtcgcgc tgtcgggcga taccctggcg
      541 ctttcctcgg gcaagctggt cattgacggc gtcaatcagg gcttcgatgc cgcgatcggt
      601 ttcgctcaga cccgccagct caagctcgac gcgcatctca ccacagtcgg cgccgaggaa
      661 agcgcggcga tcatcgccct gctgcccgac gtgagcgccg gcggcgcgtt cggcgcgacg
      721 tttcccaagg gcgagatcga tgtggctgcc gacaaggcgg agctgtttgg tctcgatggc
      781 accgacctcg cagcggccgc gacctgggac ggtggcgtgc tcgaattctc gaagttgtcc
      841 gcgggtgatc tgggcggtct cagcatcgac gccaagctca ctgcgttcgg cacgctggcc
      901 aagcccgagc tgtcgggatc ggccgcggtc aagctcgcca gcgcagcccc ggcattctcg
      961 gcggcgatgg ctgccttgaa cacgccccgg ccggttgccg atttcctgga gcgctcactg
     1021 ccggccgacg tgaacgtcag cctcgacgca ccggccggcg atggcggcca gaccctcagc
     1081 gtaaccggca agctgggtgc ggccaccacc acgctcagca gcaagctcac ggcgggtgta
     1141 gtcaacgcgc tggtcgcgcc gattaccgcg agcctcgacc tcaagtcgca gagtgcgctg
     1201 ttgctgacgc ggcaactggg cctgggcgac acaccgttgt tcgggtccga caagaccccg
     1261 ttgcacgtcg cgctgtcgct cgaaggcgcg ccgtccaaca gctaccagac gcacctgcgg
     1321 ctcgaaagcg gcgacgatca cctggcgttc gacggcgacg tgatacccgg cgacttcagc
     1381 aagatcgccg ggacgggaaa tatcgaggcc aggatcgccg atccgtcgcc gctgctcgct
     1441 accctggggg cagggggact gtacctgccc gcagtggcgg gtacggcgcg gctggcattc
     1501 gatgggctcg gcggcgccga gttggctgcg atcgatgctt cgggcgtgtc cggtgacctg
     1561 gcaatgtcca ggcaggacag cacgacgcag gtaagcggca cgctcgcttt gccggcgata
     1621 gacacgcaag gcctgctgcc gttgctcgtt ggcgcggccg gaacggtgcc gggaagcggg
     1681 ctctggccgg acgggccgat cgatatcggc agcggggcgc gccgcagcac cgggcggatc
     1741 gacctgaccg cggcatcgat ctcggcaggc ggcaagccgc ttctgggcaa gagcagcttc
     1801 ggttttgact gggacgacaa gagcgtgcat ctgcgcgacc tgtccgggcc actgtcgagc
     1861 ggcaccctga ccctggatgc aaccgtctgc tgctctaccg gatcactgcc ggtcaaagag
     1921 gtgagcggcc gggtcgcgct cgccggcgcg gcggtcgcgg caatagcgcc gccggcagtc
     1981 gccgccgaca tcaaaggagc ggtcgacgcg acggcggctt tcgatggcac cggcgcgagc
     2041 ctcgcggatg ccgtggcggc aatgaccggc accggcagct acacgatcaa cggcttttcg
     2101 gcgaaaggcc tcgatcccgg catcttcgac gcggcaggca agctcaccgg cgtggccgag
     2161 atggcgcccg acctgttgag caacaccctc gccgacaagc tggcgggggc ccccttcacc
     2221 gcgccgcagg tgaccggcag cttcaccatc gctggaggtg tcctgcgcaa tcccaacctc
     2281 gaaatcgtgg gagcaggatc gcgcatcttc ggcagcgcca gcctcggact ggccgatctg
     2341 gcgctcgatg cgcgctacac gctgtcgccg accggaacgc cggatcccag taacgcggtc
     2401 gacccggcga cggcggaggt cactgccgcg gccaagggtc cgctctgggc cccggtcggg
     2461 agctacgacg tcagtgcgct ggcggatggc atgaagatca aggcgaacga actggaactg
     2521 gcggtgctgg agcagcgcaa ggcggaagcc gacgcgcggg cgaaggccga agccgatgcg
     2581 gcggcccggc tcgcgattct ggcgccgggc gaagccattg cgacggcagg ggcggcgcgc
     2641 aaagcggcag atgatgaaac ggccaggaaa gctgccgacg atgccgcgaa gcaaaaggcc
     2701 gccacggcga tcgcggcatc gaacgaccta gggctttagc tgccgggcat ccgccagcac
     2761 ggcgacgcgc agcgccgaag acaggttggg ccccttccgg tcccggtcga gttcctcgat
     2821 cagctcgaca aggcgaatgc cccggcgcgc ggcgatcact tcaaggccgg accagaattc
     2881 gggctcgagg gcaatgctgg tgcggtgacc ggcaatggtc agcgagcgct tgtgcaacgc
     2941 tcacttcttg cggaaggcgt cgaggctgac gaccttctcg cctggtttct ctgccacgac
     3001 agcagcaggc ggagccgtcg gcaacttcgc cggttcgacg gcctcggctt tttcgtcctc
     3061 ggtcggcagc gggacggcgc cggtcagttg cagcccgaac tgcaccgacg ggtcgaaaaa
     3121 acccttgatg gccgtgaatg ggatgaccag cgtttccggc ttgtcgtcga agctgagacc
     3181 aacctcgaag cccgcctcgc ttaccttgag atcccagaac tggttctgga gaacgatcgt
     3241 catgtcggtg ggatactggt cgagcagccg ctggctgacg cgcacccccg gcgccttggt
     3301 gacgaacgaa atgaagaaat gatgctcacc cggcagaccg gtgcgcgcga cttcggacag
     3361 aaccttgcgg accacgccgc gcagcgcttc ctgggtcagg atgtcgtaac gaatatggtc
     3421 ttgcgccatt tgccttggtc aaccgccgga atccgccggc gagcatatca gccggagcgc
     3481 catgcgaaca caaggacaaa gcagccgtgc ccagaggtat gcgggaagcc ttgcatgcgg
     3541 gggaaaggtg caggcttctg ttgccaggtg cctgcggacc ccgcctgcca ccctgcgagg
     3601 agtggaggac ttcaattccc agtgctagcg ccgcttacgc agcgagagcg accggagcat
     3661 agttgtcatt ggcaactatt aggatggccc gatgacggtg gtgccatgcc gagcgaaaac
     3721 acacccttta cgcccttgtc gatcctgttt cgcccccagc ggctcccctc gcagcgggga
     3781 ggagatggtg gaggcgccgg gtactgcccc cgggtccaat gggtttatta cgatagccat
     3841 ttatcgccat agccgttgcc ggcagaccga atataggcgc cccggtgccg cgacgcaaat
     3901 tccgcgcgag cgggcgccgg tcggcctaac ggcgcggggt gaacttgacc ggtccggccg
     3961 gttctgcgac gcagcgccgg gcaactcgtt catggaccga tgacgacaca gatcattgcc
     4021 attctgcatc tggaggatgt cggcggctcg cacgtcaatc tccggagccg gcgtgggccg
     4081 ctcgagacat ttctgctgtg cgcggtcact tgcgcgaagt cgtttgccga gcagggattg
     4141 ccgtttctgc tcttgaccga ccagccggaa cggctgcgga actgcggccg cgcgctgggc
     4201 ctggcggagt cggctcttcc cgccatcgag cactatccct tcaagctcga cgtgcccccc
     4261 ggcattcgtt tccgcggagc gcatttccgc ctggagctta tcgaggcgat cgccgaggga
     4321 acattcggtc agcagtgcgc catcctcgac gtcgacgcgg ttgccatcgc gccgttccct
     4381 gaactggcgc tcggagacgc cgacctggtc gcctacaagc ttccggatgt cgggacgccg
     4441 cgcggcggtc tcaatatcct gcgagatatc gagcggctga ccggcgtgcg gccggctgcg
     4501 ccttgctggt acggcggtga actgctcgcc ggccgggcca gcgctttcgg acggctcgtc
     4561 cccaccctgc gtacggcctg ggaccgctat cgggccgacg tcgaaagctt ccactacatc
     4621 gggtcggaaa tggtgtggaa cgcgatgctc caggcgacgc cggatatcaa tgtgatcgac
     4681 gccggctacg ccggccttct cgcccgctgg tggagcacac gcggccgggc cgagcaggtg
     4741 ccattcgacg tcgcgcggcg gtccgccatc ctgcaccttc ccgccgacaa ggcgctgctg
     4801 tccaattggg cgcgccggcc gttcgaggcc gaggcgttcc ttatcgcgta tgaacggcac
     4861 ctgcgcggcg agattgccaa gggccacctc ggcaacctgc tgcggcgact gaaggggcag
     4921 cagcaacggc cggtgcccca cctgcactaa tgcggcgagt acctgtcgtc taacgcctgg
     4981 atagcggcta gtctgcccgg ggccggccgt gggaaccgct ggccgaatgg agcgccagaa
     5041 catgcctgcc ttcgctgcgg ctcgcgagac gatcgatcct caacgttcgg aacgtcaata
     5101 tctcgacctg ttgcggacgg tcctcgagac cggcgttgac cggccggatc gaaccggcac
     5161 cgggactcga tcgatcttcg gccgccagat gcggttcgac ctcgtggacg gatttccctt
     5221 gctgacgacc aagaagctgc acctgaaatc catcatctac gagctgctgt ggttcctgcg
     5281 gggcgaaacc aacgtgcgct ggctgcagga gcatggggtc aagatctggg acgaatgggc
     5341 gagcgagagc ggcgacctcg gtccggtcta tggcagccag tggcggagct ggccggacgg
     5401 ggagggtgga acgatcgacc agatcgccaa cgtggtcgat tcgatccgaa gcaagcccga
     5461 gtcccgccgc cacattgtca ccgcgtggaa tccggcagag gtcgacgaga tggcgctgcc
     5521 gccgtgccac tgcctgttcc agttctacgt ggccgagggc cggctgagct gccagctcta
     5581 ccaacggtcc ggcgacgtgt tcctgggcgt gcctttcaac atcgcctcct acgcgctgct
     5641 gacgctgatg gtggcgcagg tgaccggcct tcagccgggg gagttcgtcc acacgttcgg
     5701 cgacgttcat ctctattcaa atcacgttca gcaggcgcgt gagcaactgc agcggacgcc
     5761 caagccgctg cctcggatga cgctcaaccc ggaccggcgc tcgatcttcg acttcgagta
     5821 cgaggatttc atgctgaccg gatacgaccc cgacccgcac atcaaagccc cggtggcagt
     5881 atgaagcgat cggtcgtcgc cctcgggctg gcgctgctca ccgcgcccgc gctggccaac
     5941 gacacgactt cgcagctggg caccggtggc ctggtgttcg tcaccaatca agacatctcg
     6001 atggattccg aggatctgag cgtcggaccg aaccaggtga aggtggtcta ccagttcacc
     6061 aacacatcca ggaccgagca gcacgtgctg gtggcgttcc cgctgccgga catcaccggc
     6121 gacggcgatt tcatggtcgc ggtgcccaac gaggatccgc ggaacctctt cggcttcatc
     6181 accaccttca atggccagcc ggtgcagtcg acactgcacc agtatgcctt cgccgtcggc
     6241 atcgaccaga cggcgctgct caaatcgctg aacgtgccgc tcgcgccgtt cggcaaggcg
     6301 acgatcgatg cgatcaacgc gcttcccgat acggaccacc agcagctgct gcacctgggc
     6361 atggtcattc cgatgaccta cgacgccggc aatggcgagc agaccgactg gacgccggtg
     6421 tggacgctga aatcgaccta tagctgggag gccgacttca aggccgggca gacggcgcag
     6481 gtggtgcatg cctatacccc aagcgtgggg agcaccgtcg cgacgacttt tctcgagccg
     6541 ccgacagacg cgacgcagga agaccggccg aaggaatacc gggacaagta ttgcaccgat
     6601 gacgacctca tccggacgct gaagaagtca ctgcgcgacc ccggcgatct caacagcgcg
     6661 ccgtaccagg aaaggtggat ttcgtatgtg tggtcgaccg gcgcgaactg gtccgggccg
     6721 atcggcaagt tccacctcac gatcgacaag ggcgatccca aggacctcgt ttcattctgc
     6781 tggggcggca aggtcaccaa gacggggccc acgaagttcg agatgaacgc caccgactgg
     6841 tatccgccgg aggggcgcga gctggaaatc ctgatcctcg cccatcagga tgcatcgtcc
     6901 aatgccggct gagcgatgaa ccttgttgtt cgcgatgcgc agccggggga cgccgcgctc
     6961 atcgtacagt tcatccgcga cctcgctgag tacgaacggc tgagccacga ggcgaaggcc
     7021 acagaaacag acatcgggcg cgaattgttc gggccgaacc cgagggtgtt ctgccagatc
     7081 gccgagcggg acggccggcc ggccggattc gcgctctggt tctacacgtt ctccaccttt
     7141 gtcggacggc acggcatctg gctcgaggac ctgtttgtcg atccggaaat gcgtggcggc
     7201 ggtgtcggca aggcgctgct ggccgacctc gcgcggcggt gcgtgcgcga gggcctcggg
     7261 cgcttcgaat gggcggtgct tgactggaac cggccgtcga ttgatttcta tgccgcacag
     7321 ggggctgtgt tcatggacga ttggcggcgg tgccgggtga ccggcgatgc gctttcgagg
     7381 ctcggggcga catgagcgtt gcggtggcgc ttattgcggc agtcgccgcg aatggcgtga
     7441 tcggcagcgg caacgcgatt ccgtggtatt tgccgtccga tttcgcgcat ttcaagcgga
     7501 tgacgcgcgg caagccgctg atcatgggcc gcaagacctt cgagagcatc ggccggccac
     7561 tgccgggtcg cacgaacatc atcgtcagcc ggcaggaggg gtaccagccc gacggcgtca
     7621 tcgtcatttc gagcctcgag gcggctctgg agcatgcgca gtcgatcgcc aacgacgacc
     7681 gggccaatga ggtgatgatc ggtggcggcg ccgagattta ttcccaggcg ctgccgattg
     7741 ccgaccggct ctacatcacc catgtgggtc tcgaaccggt cggagacgcc tatttcccca
     7801 gcgtcacgca ggaccagtgg gtcgacggcg ggctgatcga cgtgcggcca gatccccgcg
     7861 atactgcggc gttccgcatc agagtttacc ggcgccggcc aaattcgcgc cgttgatcgg
     7921 cccggtgcct ccccctatat agggccacca ttcgtcgagt ggtcacgcgg cggcggacgc
     7981 tgcgggcgag gcagaccgaa agagagcata tgccctggga caacacgacg gggggcggcg
     8041 gccgcaataa ttcgggcggg ccgtggggcc aggcgccgca gggcggtggc ggtggcggcg
     8101 gcaacgggcc gcgccggggc ggcaccccca gtctcgagga cattctcagt cgcggccgcg
     8161 accgctttcg cggcgggctg ccagggggca gccgctgggc aattgccggc ggtgttgcca
     8221 tcatcgtggt gttctggctg ttcaactcgg tctacaccat cgatccgcag gaagtcggcg
     8281 tcgaaacgac gttcggcaag ccgagcgacg atctgagcac ctccggcctg catttcctct
     8341 ggtggccgat ccaggcggtc gagcgcgtca acatcgcgca gaacaagacc gaaatcggct
     8401 cggtcaacaa ccataccggc ggcaacgacg acggggtgat gctcacctcc gaccagaaca
     8461 tcgtcgacgc gaaattctcc gtgctttgga cgatcaccga tcccaaggcc taccttttcg
     8521 acgtgaagga tccggacgac atggtcaggg ccgccgccga aagcgccatg cgagaggtgg
     8581 tcgggcgcag tccggcgacc gaggtgttcc gctcggaccg ggccggtatc cagaccgaag
     8641 tccagcagat catccagtcc atcgtcgaca actataagct gggcgtccac atcgaccaga
     8701 tcaacgtcga ggacgtcgcg ccgccggaag aggttgccga cgcattctcc gaggtgcagc
     8761 gggcgcaaca ggaccagcag aaataccagg aagatgcgcg caccgatgcc aatacgctgc
     8821 tcggcaacgc gcgaggccag gcggccaaag ttcgccagga tgccgccgcc tacaaaagcc
     8881 aggtggtgca gacggcagaa ggcgaggcgg cccgcttcat ctcggtctac aaccagtatg
     8941 tgaaggcgcc ggaagtgacg cgcgagcggc tctacctgga gacgatggag caggtcctcg
     9001 cgaatgccaa caaggtggtg attgcccccg gcacgtccgg ggcggggggc gtgctgccct
     9061 acctgccgct gccgtcgctg cagcccaaga ccaccgacac caccacgacg ccatcgagtc
     9121 cgtcggtcgc gacgcccgcg tcttcgtcat cggcggagga ttgagccgtg aatagactca
     9181 ttgccgccgg cgttggcgtt gtcgtcgtcc tctacctgct gttttcgtcg atctacatcg
     9241 tcgatgtgcg cgagcaggcc atcgtgctgc gcttcgggca gatcactgcg gtgcgcaacg
     9301 agcccggact ctatttcaag ctgccgacga atttcgtcga caccgtgcag gtcatcgaga
     9361 accggctgct gcgctacgac attgccaaca tgcaggtaca ggtcagcgac ggcgccaagt
     9421 acgtggtcga tgcgttcctc acctaccgca tcgccgatcc ggtgctgttc cggcagcggt
     9481 tgcagggtga cctcgacctc gccgagcaga ggatcgcgac gcgcttcgac tcggcgctgc
     9541 ggcaggtcta tggcacgcgc aaattcgacg ctgcgctgtc ggcagagcgt ccggcaatga
     9601 tgctggaggc gcgcgacctc atcgggcccg gcatggcgga actgggcatc gacgtgaccg
     9661 atgtgcggat cttgcgcacc gacctgacgc cggatgtgtc caagaacacc ttcgagcgca
     9721 tgtcggcaga acgtttcgcg caggcggcag cgatccgggc ggacgggcag caggcggcgg
     9781 cgtcgatccg cgccatcgcc ggccggcagg cgatcgagat cgcggcttcg gccaacaagg
     9841 acagcgaaat cctgcgcggc gagggcgatg ctcagcgcgg ccagatctac gccgctgcgt
     9901 acggcgccga cccggagttt ttcgacttct accgttcgct gcagtcctat cgcacggcgc
     9961 tcggctcgac aggcaccacc atggtgcttt cgccggacag cgatttcttc aagtacttca
    10021 aggctgacac gacgagcggc acggtcccgc ccccggcctc gcccaatggc attgcgacgc
    10081 tgccctcgac tgagttgagc gtgccggagc catcggacgt gctgccgccc accaatgtcg
    10141 gcgcgcccgg aaccgacgac gccggagcgg cggcgaatgc ggcattgctg ccctcgacgc
    10201 cgggcgacct ggcgtcgtct tcgatcgcgc cgcccccgag cacctcaagc gcgcagtaga
    10261 agccgatctg gcaatagcga atgaggccgg cacggaaacg tcgccggcct caatttatcg
    10321 tggcgatgaa ctgattgcgg attccccgac gttgctctca tgtgcaggtg agagggcgag
    10381 gggatcggca tgagggtttc ggctgttcgg gcaatcgtcg cggctgccct gctggcgctc
    10441 gcgacagtgt cgccggtgct ggcggatggc ccgcaatcgg tcgccaagct cgccgcgcgg
    10501 ctgtctccgg ccgtggtcaa catcgcgacg agcaagatgg tcggtggcgg aggcgaagag
    10561 ttcccgacgg cgccgcaggg ctcgccgctc agccagatgt tcgatgacgt caatcccaac
    10621 aagggacagg ggccgcaggc cgaggaggag gcacggagcc tcggctcggg ctttatcatc
    10681 agcgccgacg gggtcatcgt caccaataat cacgtgatcg atggcgccga cgacattcag
    10741 gtgttcctga ccgacggcac ccgcctgacc gccaaggtgg tgggagcgga cgacaaggcg
    10801 gatctcgcgg tgctcaaggt cgaggccggc caccccctgc cgttcgtgca gcttggcgac
    10861 agcgacacgg ccgaggtggg cgactgggtg atggcgatcg gcaatccgtt cgggctcggt
    10921 ggctcggtga cgctcgggat cgtgtcggcg cgcgaccgcg atatccagga ggggccgtac
    10981 gacgatttca tccagacgga cgcggcgatc aacgagggca attcgggcgg tccgctgttc
    11041 gacatgaacg gcaaggtggt cggtatcaac acggccatca tcgctcgcgg cggctcgtcg
    11101 ctcggcatcg gctttgccgt gccggtcaac ctggcccggc cggtgatcga gcagttgcac
    11161 gaatatggcg agacacgccg gggctggctc ggagtgggca tccaggattt gacgccggaa
    11221 atggccgcga gcctggggcg gcccaacagc ggtggtgcgc tggtggtgga tgtcaccaag
    11281 gccgggccgg ccgacggtct ggtgcgcgag ggcgacatca ttctcgcctt caacggcaag
    11341 accatcgaga agatgaagga cgtgccgcgg ctcgtggcgg aaacagcggt ggggcagaag
    11401 gtgcgcgtgc tgctgctgcg tgaaggcaag gaagtgggcg tcgacgtcac cctcgggcgg
    11461 ctcgagacgg ggccgcagca gaccgccgcc gcgacatccg aaccaagcac gccggggccg
    11521 gacgtcgacg agccggtcgg gccgccgccg ggcctcaagg atatgctggg catcgatctc
    11581 ggcccaatcg acgacgcggc acgcgggact tacgacctgg ggaccgggat tggcggcatc
    11641 gtcatcaccg aggtgaccaa gggctcggat gccgaaaaac aggggctggt cgccgggctc
    11701 gtggtcagcg aggtcaacca gcagaaggtc gagaccgtcg cggacgtgac cgaaaaggtg
    11761 aacgccgcca aggaggcggg acggccggcg gtgctgctca aggtaacgga cggcgcgggc
    11821 aattcgcgct tcgtcgcggt gcggctgaac tagcgctcag ccgtggatga aatcgtcgtc
    11881 ggaatagccc tgcaggtaga gcagcgccgt gaggtcgccg tgatcgatgc gcacctgcgc
    11941 ctcggccgcg accaccggct tggcgtggag cgctaccccg agccccgcgg cgcggatcat
    12001 gtcgaggtcg ttggcgccgt cgcccacggc aagggtggcc gccgccggaa ttgccagctt
    12061 cgcggtcagc gtctcgaggc ggttgagctt ggcctccttg ccgacgatcg gctcggcgac
    12121 ggtgccggcg aggcgatcgc cgtcgaattc aagcacattg gccatcgcct cgtcgaagcc
    12181 gatgcgcttg gcgaagtaat cggcaaagaa ggtaaagccg cccgacacaa gggcggtgaa
    12241 cgccccgtgc gtcttcatcg tctggacgag gacacgcccg ccgggggcga acgtgatctg
    12301 ttcgcgacgc acctcttcga tgcgcttcag cggcaggccc ttgagcagcg ccacccgggt
    12361 ccgcagcgcc tgcgcaaagt cgagttcgcc gttcatcgcc cgggcggtga tcgcggcgat
    12421 ctcggccttg atcccgacgg cgtcggccag ctcgtcgatg cattcctctt cgatcatggt
    12481 ggaatccatg tcggcaacca gcaggcgctt gcggcggtgc gccagcggaa cgagcgcgac
    12541 atcgatcggc cgggcggcga cgagggcacg ggccgcggtc gccgcatcgg gcagtttggg
    12601 cttgacgatc tcgcaggcga tgcgctgatg cagccagttg agctcgccgc cgacctcgtt
    12661 gagcacggcg gcgacgagag ctgaatccag cgccggatcc gcgggattgg caatcaggca
    12721 gaggaccgac acgagcgctc gatggctggg ggaagaagag cggtcctgat agcgggtcca
    12781 accgccagcg gcaagtcggc gctggcgctg acggttgccg ccgaagcggg cggcgtgatc
    12841 gtcaatgccg atgcgctgca ggtctacgac ggactgcatt tgctgacggc gcgaccgggg
    12901 acggacgatc tcgccagcgc cccgcaccgg ctctacggca ccgtgtcccc cgaccagcgc
    12961 ttctctaccg gcgactgggt gcgggccgtc gcgcgggtga tcgacgagga caagccgctg
    13021 gtcttcgtcg gcggaacggg actctatttc gaggcgctca ccaaagggct ggcgatggtg
    13081 ccgagcgtcc caccggaggc ggtcgcctgg gcaacggcac aggtcgctgg gctaagccgc
    13141 gaggagcgcg gccggctgat cgcggagcgc gacccggaaa cggcgcgacg gctgaaggcg
    13201 ccggatccac agcgggtcat ccgggcgctc gcggtgcagc gcgccaccgg ccggtcgctc
    13261 gcaaccttcc aggatgcgcc acagagcgga ctgctggccg ggtggacgct cgaaaaaatc
    13321 gtgctcgctc cgtcccgcga tgtgcttcgc gagcggattg cgcggcgttt tttccggatg
    13381 ctggaggagg gcgcggccga ggaggcacag gtgttcctga cgcgtggcct tgatccgtcg
    13441 ctgccggcga tgaaggccat cgggttgcgc gaaatcggag agtggctcgc cggccggagc
    13501 acccacgaag agatgatgga gcgcgcggta acggcgacgc ggcaatacgc caagcggcag
    13561 cggacgtggt ttcgcaaccg catggcggac tgggagtggc gcgagccggc cggctagatc
    13621 ggcgatcgtg aggtgaggcc cagccggtcg cgcagcgcga agcgcagcgt cagcaccaat
    13681 gccaccgccg caaggccgct cgccagcccg atccagatgc cgacgccctt gagcccgagc
    13741 gggaacgcca ggacataggc gacagggaag ccgaccagcc aatagccgac gagcgcgatc
    13801 acgagcggca tcgaggtgtc ggacaggcca cggagggtcg cggccatcgc cacctgcgtg
    13861 ccgtcgaaca gctgaaagaa gccgccgacg acgagaaaac tcgtcgccag cgccaccgtg
    13921 ccggcgttgg cgggattggt cgggtcgagg aacaggccaa ccagggtccg cggcaacagc
    13981 aggaagatcg cggcagtggt cgacatgaag accagcgtca ccagcagcgc tgcccaaccg
    14041 gccttgcgga cgccgtcggg gttgccagcg cccatagcga tgccgacgcg caccgttgcg
    14101 gcctggctga ggccgagcgg caccatgaac gagatcgagg cgagcgtcag cccgatggca
    14161 tgggcagcga ccgagtcctc gctgatccag ccctgcagga gcgaggcgaa ggtgaagagg
    14221 ccaacctcgg ccagcgacat caggccgatc ggcaggccaa tccgccagag ctcgatgaac
    14281 cgcggccagt cggcgcggaa gaagtggtgg aacacgtggt atcgccgaaa gcgacgccgc
    14341 gtgaggatgt aggccaccat catggcgagc atgacgacgt tgacggtcgt cgtcgaaatc
    14401 ccggcgccgg cgagccccag gcggggcatt ccccaattgc cgaagatcag cccgtagtcg
    14461 ccggcggcgt tgaccaccac cccggccacg gtaatccaga ggatgatccg ggtcgcgccg
    14521 tgggcggcga ggaaggaccg aaagacgacg atgaagaagg ccgggaa
//
LOCUS       DATAZA010000170         2012 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1526874, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000170 DATAZA010000000
VERSION     DATAZA010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1526874"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..548)
                     /gene="eda"
                     /locus_tag="VHZ56_04280"
     CDS             complement(<1..548)
                     /gene="eda"
                     /locus_tag="VHZ56_04280"
                     /EC_number="4.1.2.14"
                     /EC_number="4.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008675 -
                     2-dehydro-3-deoxy-phosphogluconate aldolase activity
                     [Evidence IEA];
                     GO_function: GO:0008700 - 4-hydroxy-2-oxoglutarate
                     aldolase activity [Evidence IEA];
                     GO_process: GO:0009084 - glutamine family amino acid
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009255 - Entner-Doudoroff pathway through
                     6-phosphogluconate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HEX4297217.1"
                     /translation="MPQDAAALRTTLSLAPVIPVIILDDVAKARPLAEALVAGGLPVL
                     EVTLRTPHALQVIEEMAKVPGAVVGSGTVRSPLQMGHSVDAGARFMVSPGASPRLLEA
                     ADGFPIPLLPGIGTPTEAMTASEHGYNFLKFFPAEALGGAPVLKAFASPLSDIIFCPT
                     GGIDLAKARIYLALPNVICVGGS"
     gene            complement(624..1511)
                     /locus_tag="VHZ56_04285"
     CDS             complement(624..1511)
                     /locus_tag="VHZ56_04285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX4297218.1"
                     /translation="MRFIGWLIAVVIVVGAGVGAYMLTPVQGPARDLTLVGDATRGAY
                     LMRLGGCVTCHTDPQNKDAVLGGDQTDPLKTPFGNFYPPNITSSKSAGIGNWTLAQFA
                     DAMSNGEGPQGHLYPAFPYDAYTTMSDQEIADLYAALQQVPAVDTPSHPHEVSFPFNQ
                     RWALAGWKHLFFHPHRYVPDPTQSAEWNCGRYIVMGPGHCVTCHSPRNALGGIDPGTE
                     LTGNPAGGPGGKAPPLTMAGLAKHHYDTDALAEVLDTGLTPGDDSLLAPMSEVIADET
                     SQWTDADRHAVAVYLTSGK"
     gene            complement(1574..>2012)
                     /locus_tag="VHZ56_04290"
     CDS             complement(1574..>2012)
                     /locus_tag="VHZ56_04290"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEX4297219.1"
                     /translation="MASLELVSLVKMSEEDLAYLDAGKSIEQHAREILARPNCRLLVV
                     TLGADGSLAFTRSASVRSPIYPATPGGDNVGAGDTLMAGIITWLKDHDGLAPARMGAL
                     AVAELEQMLWFGAVAAGINCSRAGANPPTRAEVDAVLRSRPAA"
BASE COUNT          325 a          691 c          685 g          311 t
ORIGIN      
        1 gagccgccga cgcagatgac gttgggcagc gccaggtaga tccgggcctt ggcgagatcg
       61 atgccgccgg tggggcaaaa gatgatgtcg ctgagcggcg aggcgaaggc tttcagcacc
      121 ggcgcgccgc cgagcgcttc ggccggaaag aacttcagga aattgtagcc gtgctcgctg
      181 gccgtcatcg cctcggtggg cgtgccgatg cccggcagca gcgggatggg aaaaccgtcg
      241 gccgcctcga gcagtcgcgg gctggcgcct ggcgagacca tgaaccgcgc gccggcatcg
      301 accgaatggc ccatctgcag cggcgagcgc accgtgcccg agccgaccac cgcgccaggc
      361 accttcgcca tctcctcgat cacctgcagc gcatgcgggg tgcgcagcgt cacctccagc
      421 accggcaggc caccggcgac cagcgcttcc gccagcggcc gtgccttggc gacatcgtcg
      481 aggatgatca ccgggatcac tggcgcgagg ctcagcgtgg tgcgtagcgc ggcagcatcc
      541 tgcggcatcg aaggctcccg tgaggcgtcc ggcctccagt taggagcctt cgcgccgccg
      601 atcaagccgg atcgcctgcc cgatcacttg ccgctggtga gatacaccgc caccgcgtgg
      661 cgatcggcat cggtccactg cgaggtctcg tcggcgatca cctcgctcat cggcgccagc
      721 aggctgtcgt cgccgggggt gaggccggta tcgagcacct cggccagcgc gtcggtgtcg
      781 tagtgatgct tggcgagacc ggccatcgtc agcggcggcg ccttgccccc cggtccgccg
      841 gcgggattgc cggtgagctc ggtgcccgga tcgatgccgc ccagcgcgtt gcgcggactg
      901 tggcaggtca cgcaatggcc ggggcccatg acgatatagc gcccgcagtt ccactccgcc
      961 gactgcgttg gatccggaac atagcggtgc ggatggaaga acaggtgctt ccatccggcc
     1021 agcgcccagc gctggttgaa cgggaagctc acctcgtgcg gatgcgatgg cgtgtcgacg
     1081 gccggcacct gctgcagcgc cgcatagaga tcggcaatct cctggtcgct catcgtcgtg
     1141 taggcgtcgt acgggaacgc cgggtagaga tggccctgcg gcccctcgcc attgctcatc
     1201 gcgtcggcga attgcgcaag cgtccagttg ccgatccccg cgctcttcga cgaggtgatg
     1261 ttgggcggat agaaattccc gaacggcgtt ttgagcggat cggtctggtc gccgcccagc
     1321 acggcgtcct tgttctgcgg atcggtgtgg caggtcacgc acccgcccag ccgcatcagg
     1381 taggcgccgc gcgtcgcgtc ccccaccagc gtcaggtcgc gagccggtcc ctgcacgggt
     1441 gtcagcatgt aggcgccgac gcccgcgccg acgacgatga ccacagcgat gagccagccg
     1501 ataaagcgca tgccggcgaa caaagcagag cccgccggac gctgcaatcg aacaaaataa
     1561 tcgtgtttgt ggattaggcc gcgggccggc tccgcagcac ggcgtccacc tcggcgcggg
     1621 tcggcggatt ggccccggcc cggctgcaat tgatgccggc ggcaacggcc ccgaaccaca
     1681 gcatctgttc gagctctgcg acagccaggg cccccatgcg ggcgggcgcc agcccgtcgt
     1741 ggtccttgag ccaggtgatg atcccggcca tcagcgtatc gccggccccg acattgtcgc
     1801 cgccgggcgt tgccggatag atcggcgagc gcacgctggc cgaacgggtg aaggcaagcg
     1861 aaccgtcggc ccccagcgtc accaccagca gccggcagtt cggcctcgcg agaatctcgc
     1921 gcgcgtgctg ctcgatgctc ttgccggcat cgagataagc caggtcctct tccgacatct
     1981 tcaccaggct gaccagctcc agcgacgcca tc
//
LOCUS       DATAZA010000171         6190 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_482518, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000171 DATAZA010000000
VERSION     DATAZA010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6190
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_482518"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..375)
                     /locus_tag="VHZ56_04295"
     CDS             complement(<1..375)
                     /locus_tag="VHZ56_04295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020480921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase related protein"
                     /protein_id="HEX4297220.1"
                     /translation="MAFDNHPEITPKLVADHGLKADEYQKILGLIGRPPTLTELGIFS
                     AMWNEHCSYKSSKKWLRTLPTSGPRVIQGPGENAGVVDIGDGQAIVFKMESHNHPSFI
                     EPYQGAATGVGGILRDVFTMGAR"
     gene            complement(534..905)
                     /locus_tag="VHZ56_04300"
     CDS             complement(534..905)
                     /locus_tag="VHZ56_04300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008033972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2237 domain-containing protein"
                     /protein_id="HEX4297221.1"
                     /translation="MSEERNVLGEPLQPCSDNPLTGFFRTGNCMTGPEDVGRHTVCAE
                     MTAEFLAFSKSRGNDLSTPHPEWAFPGLKPGDRWCLVALRWLEALEAGVAPRIALLAT
                     HQSVLQSVDLATLKRYALDLS"
     gene            complement(902..1534)
                     /locus_tag="VHZ56_04305"
     CDS             complement(902..1534)
                     /locus_tag="VHZ56_04305"
                     /inference="COORDINATES: protein motif:HMM:NF038065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Pr6Pr family membrane protein"
                     /protein_id="HEX4297222.1"
                     /translation="MRRTSTWIGLAIGTVALLLQFYATLGLKLGQGAGLGATLVFFFT
                     FYTILTNIMLVLVYLSDLNAARWLGWWRSPVTRGMMAGAIALVGIFNHLLLADLQDLT
                     GLAALCDTLLHYAAPAYFVLWWLIFQPKGTLRFADIPVMLLPTLIWLIWAMLRGAVVG
                     EYPYPILDAATLGYGAVAINCLFVFIGLLVIYLIVVALDRALAGRLPRAA"
     gene            complement(1546..2220)
                     /locus_tag="VHZ56_04310"
     CDS             complement(1546..2220)
                     /locus_tag="VHZ56_04310"
                     /inference="COORDINATES: protein motif:HMM:NF038065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Pr6Pr family membrane protein"
                     /protein_id="HEX4297223.1"
                     /translation="MPLRFWYAAFAILVGAVGLGLDFYVIGGTMVVSPDNPVARSVPN
                     FLIYYLTFLTNLSNLGLILTYLSDIPSWRWLGWFRHPVTRAGMAGIIALVMGFYHFML
                     APTLTSLTGPIVYSNWLLHYVTPVLFIAWWLAFNGHGTLRYRDVPTMLVPGVSYAAYV
                     LVRGRIAGEYPYTILDPTFALPGHPAQGYLTVVISVAVLVAMVAIFDLLLVLIDGLMA
                     RRRQPA"
     gene            complement(2232..2897)
                     /gene="purQ"
                     /locus_tag="VHZ56_04315"
     CDS             complement(2232..2897)
                     /gene="purQ"
                     /locus_tag="VHZ56_04315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008875496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HEX4297224.1"
                     /translation="MKSAVIVFPGLNRDRDMIAALTAIGGVPPAVVWHKDTTLPDVDL
                     IVIPGGFSYGDYLRAGAIAARSPIMAAIRDRAAKGVRVLGVCNGFQILTEAGLLPGVL
                     MRNSSLRFVCREVRLEVVNANTAFTGGYAQGQVITAPVAHHDGNYFADAATLQGLEDN
                     DQVAFRYAEGTNPNGSVNDIAGVFNRDKTVLGLMPHPENLIEAAHGGLDGRSLFSGLL
                     QVA"
     gene            complement(2938..4023)
                     /locus_tag="VHZ56_04320"
     CDS             complement(2938..4023)
                     /locus_tag="VHZ56_04320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019859672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HEX4297225.1"
                     /translation="MSGQNHRLDWVDSAKGISIILVVMMYSVFNVGQDASGVGIFHYV
                     IGFATPFRMPEFFLISGLFLDQVIARSWRAYTDRRAVHYLYFYAVWAVIHLVLKIGIM
                     SAAPGEALTDILWAIVEPYGVLWFIYLLAAFSLASKFFYELKAPRWAVWAFGAAFQMA
                     HIQTGSYLVDQFCAYFVFFYSGYIFAPLLFRLVDFAIGHKRLALLGLAIYAVVNVSLV
                     FSPGYAVLPTEIQLGYAGLPGVRLLLAIAGAVALCTTAGLITGLRGTRWLTWLGEHSI
                     VVYLVFVLPMSFVRIGLAKVGLIHDVSLSSFLVIVLSIAFSVGLYGLVQWSGRAKFLF
                     ERPAWAHIPGTKGSRSYAPPANTVPAE"
     gene            complement(4603..4842)
                     /gene="purS"
                     /locus_tag="VHZ56_04325"
     CDS             complement(4603..4842)
                     /gene="purS"
                     /locus_tag="VHZ56_04325"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HEX4297226.1"
                     /translation="MRARVTVTLKSGVLDPQGQAITGSLKSLGFGGVASVRQGKIFDL
                     ELGDADPADARLSLAAMCEKLLANTVIENYAIEIV"
     gene            complement(4854..5618)
                     /gene="purC"
                     /locus_tag="VHZ56_04330"
     CDS             complement(4854..5618)
                     /gene="purC"
                     /locus_tag="VHZ56_04330"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEX4297227.1"
                     /translation="MNRRRKIYEGKAKDLYEGPEPGTLVQYFKDDATAGNGKKHEIID
                     GKGVLNNRISEFVFTKLNTLGIPTHFIRRINMREQLIKEVEIIPLEVVVRNVAAGSLV
                     KRLGLESGTQLPRSIIEFYYKDDALNDPMVSEEHITAFGWATPPELDDIMSLAVRVND
                     FLTGLFMGVGIQLVDFKIECGRLYENDTMRIVLADEISPDNCRLWDIKTRNKLDKDRF
                     REDLGGLVDAYREVAQRLGILVETDNALTTGPRLVQ"
     gene            5864..6187
                     /locus_tag="VHZ56_04335"
     CDS             5864..6187
                     /locus_tag="VHZ56_04335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008193764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1476 domain-containing protein"
                     /protein_id="HEX4297228.1"
                     /translation="MAQFDDREKAQEAKFAHDSDLQFKATARRNRLLGLWAAEHMGLS
                     ADHAKTYAASVVDADFAEPGDEDVFRKVSGDLKANGASVSDDMIRARMAELTLTARAQ
                     VLAEG"
BASE COUNT         1187 a         1923 c         2127 g          953 t
ORIGIN      
        1 ccgtgccccc atcgtgaaca cgtcgcgcag gatgccgccg acgcccgttg ccgcgccctg
       61 gtagggctcg atgaagctcg ggtggttgtg cgactccatc ttgaagacga tcgcctggcc
      121 gtcgccgata tcgacgacgc ccgcgttctc gcctggcccc tggatgacgc gcgggccgct
      181 cgtcggcagc gtccgcagcc acttcttcga ggatttgtac gagcagtgct cgttccacat
      241 cgccgagaag atgccgagct cggtcagcgt cggtgggcgg ccgatgaggc ccaggatctt
      301 ctggtattcg tcggccttga ggccgtggtc ggcgacgagc ttgggcgtga tctcggggtg
      361 gttgtcgaag gccatggcac cgcaaactcg gtcatcgatt gccgcgtctt agccgaagcg
      421 agggcgcgaa catagggacg cacggccatt tgcaggggat agcgtacaat gaacgggccc
      481 gtcggcggcg gcaacaccgg atcgcgccgc tacgcaacgt tgacggccgg ctctcagctc
      541 aggtcgagcg cgtagcgctt gagcgtggcg aggtcgacgg actgcagcac cgattgatgc
      601 gtcgcgagca acgcgatgcg gggtgccacg ccggcctcca atgcctcgag ccagcgcaac
      661 gccacgaggc accagcggtc gccgggcttg aggccgggga aggcccattc ggggtgcggc
      721 gtgctgagat cgttaccgcg ggatttgctg aaggcgagga actccgcggt catctcggcg
      781 cagaccgtgt gacggcccac gtcttccggc ccggtcatgc agttgccggt gcggaaaaag
      841 cccgtcagcg gattgtccga gcagggctgc agcggctcgc cgaggacgtt gcgctcctcg
      901 ctcatgcggc ccgcggcagg cggccggcca gcgcccggtc gagcgccacc acgatcaggt
      961 agatgacgag gaggccgatg aacacgaaca ggcagttgat cgccacggcg ccatagccga
     1021 gcgtggcggc gtcgaggatg ggataggggt attcccccac caccgcgccg cgcagcatcg
     1081 cccagatcag ccagatcagg gtcggcagca gcatcaccgg gatgtcggcg aagcgcagcg
     1141 tccccttggg ctggaagatc agccaccaca ggacgaaata ggccggcgcg gcataatgga
     1201 gcagcgtgtc gcacagcgcc gccaggcccg tcaggtcctg caggtcggcg agcagcaggt
     1261 ggttgaagat gccgaccagc gcgatggcgc cggccatcat gccgcgcgtg accggcgatc
     1321 gccaccagcc gagccagcga gcggcgttga gatcgctgag atagaccagc accagcatga
     1381 tgttggtcag gatggtgtag aaggtgaaaa agaacaccag cgtcgcacca aggcccgcgc
     1441 cttgcccgag cttcaacccg agcgtcgcat agaactgcag cagcagcgcc accgtgccga
     1501 tggcaagccc gatccacgtc gacgttcgtc gcatcgctcg ccccctcagg ccggctgtcg
     1561 cctccgcgcc atcaaaccgt caatgagcac cagcagcaag tcgaagatcg cgaccatcgc
     1621 caccagcacc gcaacgctga tgaccacggt gaggtagccc tgcgccggat ggccgggcag
     1681 cgcgaacgtc ggatcgagga tggtgtaggg atattcgccg gcgatgcggc cacgcaccag
     1741 cacataggcc gcgtagctga cgcccggcac cagcatcgtc ggcacgtcgc ggtagcgcag
     1801 tgtgccgtgg ccgttgaatg ccagccacca ggcgatgaac agcaccggcg tcacgtagtg
     1861 cagcagccag ttcgaataga cgatcgggcc ggtgagcgag gtcagcgtcg gcgccagcat
     1921 gaaatgataa aagcccatca ccagcgcgat gatgccggcc atgccggcgc gggtcaccgg
     1981 gtgccggaac cagccgagcc atcgccatga cggaatgtcg ctcagatacg tgaggatcag
     2041 cccgagattg ctgagattgg tcaggaacgt caggtagtag atgaggaaat tcggcaccga
     2101 gcgtgccacc ggattgtcgg gcgacaccac catcgtcccg ccgatgacgt agaaatcgag
     2161 cccgaggccg acggcgccga cgaggatggc gaacgccgca taccagaacc gcaatggcat
     2221 cgatgaccct gtcaggcgac ctgcaacagg ccggagaata ggctgcggcc gtcgagtccg
     2281 ccatgggcgg cctcgatcag gttttccggg tgcggcatca gcccaagcac tgtcttgtcg
     2341 cggttgaaca cgccggcgat gtcgttgacc gagccgttcg gattggtgcc ctcggcatag
     2401 cggaaggcca cctggtcgtt gtcctcgagc ccctgcaggg tggcggcgtc ggcgaagtag
     2461 ttgccgtcgt ggtgcgcgac cggcgcggtg atcacctgcc cctgcgcata gccgccggtg
     2521 aatgcagtat tggcgttgac cacctcgagc cggacttcgc ggcagacgaa gcgcagcgag
     2581 ctgttgcgca tcagcacgcc gggcagcagg ccggcctcgg tgagaatctg gaagccgttg
     2641 cagaccccca gcacgcgcac gcccttggcc gcgcggtcgc ggatcgcggc catgatcggc
     2701 gagcgagccg cgatcgcgcc ggcccgcagg tagtcgccat acgagaagcc gccggggatg
     2761 acgatcaggt cgacgtccgg cagcgtcgtg tccttgtgcc agacgacggc cggcggcacc
     2821 ccgccaatgg cggtgagtgc cgcgatcatg tcgcggtcgc ggttgagccc ggggaagaca
     2881 atgacggccg atttcatggc gccgacttct gctgagtcgg cgccccgatt gcaaggccta
     2941 ctcggctggc accgtgttgg ccggcggcgc gtagctgcgg ctgcccttgg tgccggggat
     3001 gtgggcccag gccggccgct cgaacaggaa cttcgcccgc ccgctccatt gcacgaggcc
     3061 atagagcccg accgagaacg cgatcgacag cacgatcacg aggaagctcg acaggctgac
     3121 atcatggatg aggccgactt tcgccagccc gatccgtacg aacgacatcg gcagcacgaa
     3181 caccaggtag accacgatcg agtgctcgcc cagccaggtg agccagcgcg tgccgcgcag
     3241 cccggtgatc agcccggcgg tggtgcagag cgccaccgcc ccggcgatcg cgagcaggag
     3301 gcggacgccc ggcaggccgg catagccgag ctggatttcg gtcggcagca ccgcgtagcc
     3361 cggcgaaaac acgaggctga cgttgaccac ggcgtagatc gccaggccga gcagcgccag
     3421 ccgcttgtgg ccgatggcga agtcgaccag ccggaacagc agcggcgcga agatgtagcc
     3481 cgagtaaaag aagacgaaat aggcgcagaa ctggtcgacc aggtacgagc cggtctggat
     3541 gtgcgccatc tggaacgcgg cgccgaacgc ccacaccgcc cagcgcggcg ccttgagttc
     3601 gtagaagaac ttgctggcga ggctgaaggc ggcgagcagg tagatgaacc acaggacgcc
     3661 atagggctcg acgatggccc acaggatgtc ggtcagcgct tcgcccggcg cggcgctcat
     3721 gatgccgatc ttgagcacca ggtggatcac cgcccagacg gcgtagaagt agagatagtg
     3781 gaccgcccgg cggtcggtgt aggcgcgcca gctgcgggcg atcacctggt cgaggaacaa
     3841 ccccgagatc aggaagaact cgggcatccg gaacggcgtc gcaaagccga tgacgtagtg
     3901 gaagatgccg acgcccgagg cgtcctgccc gacgttgaag accgagtaca tcatcaccac
     3961 gaggatgatg gaaatcccct tggcagaatc gacccagtcg agacggtgat tttgacctga
     4021 catgccgcat actccaggtt ggtggaggcg gcttacggca aagccggcgt tagcgctcgc
     4081 ggagtcgtcc gcaagggtga acccgggtgc ttaacgcgta aaaggcgatc ggtcagacgc
     4141 cggccggaac cgatgcgtag gcggcgaaca tgacgccgag cgcgaggaag aacaggatcg
     4201 agagcgaaaa ggtcttgagc attttggggc cgggctgact ggtcgggcgc gccgggaacg
     4261 aggcgcgaag tggttatagg gcggactcgt aaacgagcat tgtatcggct tggttaagcc
     4321 gtcggtaacg cctgcggctg ccgcgtgaat caatgcggcc ggacggctga acggcagctg
     4381 aatgtcaggt gggaatcgtc gtgtaggcgg cgatcaggaa gccgatggtc aggaggaaga
     4441 gcagggaaag cgaaacggtc ttgagcatcg gggacaccgg cgaacaccac acgcgaggac
     4501 gcgtgaaagc tctagctgag tcgaatccgc gggcgagacg gcatcgcgcc ggcgcggccc
     4561 gattgtgcac aggtgtgact ccaaaagcgc aggcgccgga ggctagacga tctcgatcgc
     4621 gtagttctcg atcaccgtat tggcgagaag cttctcgcac atcgccgcga ggctcagccg
     4681 ggcgtcggcc ggatcggcat cgccaagctc gagatcgaag atcttgccct gccgcaccga
     4741 cgcaacgccg ccgaagccaa ggctcttgag cgagccggtg atggcctggc cctgcgggtc
     4801 gagcacgccg gatttgaggg tgacggtgac acgggctctc atcgagagaa gctctactgg
     4861 acgagtcgtg gcccggtcgt cagcgcgttg tcggtttcca caagaatgcc gagccgctgc
     4921 gccacctcgc ggtaggcgtc gaccagcccg ccgagatcct cgcggaagcg gtccttgtcg
     4981 agcttgttgc gggtcttgat gtcccacagc cggcaattgt ccggggaaat ctcgtcggcc
     5041 agcacgatcc gcatggtgtc gttctcgtac agccggccgc actcgatctt gaagtcgacg
     5101 agctggatgc cgacgcccat gaacagcccg gtgaggaagt cgttgacgcg cacggccagc
     5161 gacatgatgt cgtcgagttc gggcggcgtg gcccagccga acgccgtgat gtgttcttcg
     5221 ctgaccatcg ggtcgttgag cgcgtcgtcc ttgtagtaga actcgatgat cgagcgcggc
     5281 agctgcgtgc cggactcgag cccgaggcgc ttgaccagcg agccggctgc aacgttcctg
     5341 accacgacct cgaggggaat gatctcgact tccttgatca gttgctcgcg catgttgatg
     5401 cggcggatga agtgggtcgg gatgccgagc gtgttgagct tggtgaagac gaactcggag
     5461 atgcggttgt tgaggacgcc cttgccgtcg atgatctcgt gcttcttgcc gttgccggca
     5521 gtcgcatcgt ctttgaaata ctggaccaga gtgccaggct cgggaccctc atagaggtcc
     5581 ttggccttgc cctcgtaaat cttccgccgg cggttcattg ggggcatcct ggcagcgatc
     5641 gcagggaatg ggggaggttg gccgttcatg cgccacaacc ggccgcaaaa gcaagctgat
     5701 tcccgaccgc cggcttgccc cgggaaatcc gccagccgga tgagcggctt aggacgaatt
     5761 cctcattgtc ggctgcggcc atcacggacg gttgattaag gcgacgggcc ggactatctc
     5821 ctgccggaac ggcgtatctc acgccgcatg gcggaggatc ccgatggccc agttcgacga
     5881 ccgcgagaaa gcccaggaag ccaagttcgc gcacgacagc gacctgcagt tcaaggccac
     5941 cgcccgccgc aaccggctgc tcggcctgtg ggccgctgaa cacatgggac tcagtgccga
     6001 ccacgcgaag acctacgctg ccagcgtcgt ggacgcggac ttcgccgagc ccggcgacga
     6061 ggacgtcttc cgcaaggtct ccggcgacct caaggccaac ggcgcctcgg tctccgacga
     6121 catgattcgc gccaggatgg cggagctgac cctcaccgcc cgggcgcagg ttctcgccga
     6181 gggctgaggc
//
LOCUS       DATAZA010000172        11393 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1295701, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000172 DATAZA010000000
VERSION     DATAZA010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 11393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11393
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1295701"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /gene="ubiG"
                     /locus_tag="VHZ56_04340"
     CDS             complement(<1..280)
                     /gene="ubiG"
                     /locus_tag="VHZ56_04340"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018010838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008689 - 3-demethylubiquinone-9
                     3-O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HEX4297229.1"
                     /translation="MTETTINPDEIAKFSAMADDWWDPEGDFKPLHRFNPVRLAYIRD
                     WALTRFSRDGTERRPLAGLSILDIGCGGGLLTEPLTRLGATVTGIDAAP"
     gene            complement(290..670)
                     /locus_tag="VHZ56_04345"
     CDS             complement(290..670)
                     /locus_tag="VHZ56_04345"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX4297230.1"
                     /translation="MNAKTEIRATVERLGTLMFERNPGLADEFAPAAMLVGSEPGEVA
                     DGREAIRALIAGLHARADRYTWAWDRLDISAAGSVGWFCAEGAPVVTAATGTTRHAYR
                     LSGVLERSGARWLWRLFHGSEPRV"
     gene            766..2037
                     /locus_tag="VHZ56_04350"
     CDS             766..2037
                     /locus_tag="VHZ56_04350"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008835158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEX4297231.1"
                     /translation="MARVVMKFGGTSVANVERIRQAARHVKREVDAGNQVTVVVSAMS
                     GKTNELVGWVNEGSKLHDAREYDAVVASGEQVTAGLMAIVLSEMGIPSRSFQGWQIPI
                     RTDDAHGAARIAEIDPTELNKRMAEGVVPVVTGFQGIAPSGRVTTLGRGGSDTSAVAI
                     AAAVGADRCDIYTDVDGVYTTDPRVDPKAKRLNRVAFEEMLEMASLGAKVLMIRSVEM
                     AMAHKVRLVVRSTFDDPEAPQIGPDGLPGVPGTLVCDEDEIMEKQIVSAVTLAKAEAK
                     ITLRDVKDRPGVAAAVFGALADESIVVDMIVQNISDDGSVTDITFTVPDSECDKSVRV
                     LEAAKKSGAIDYQRVTGAKGGAKVSVVGVGMRNHAGVAASMFKALADKGINIQLITTS
                     EIKTSVLIDDEYAELAVRALHTYYGLDKPAA"
     gene            2140..4407
                     /gene="ptsP"
                     /locus_tag="VHZ56_04355"
     CDS             2140..4407
                     /gene="ptsP"
                     /locus_tag="VHZ56_04355"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006728732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEX4297232.1"
                     /translation="MATGIGGPRVLLRQLRETMAEPLASQDRLDKIVTLIATNMQADV
                     CSFYVLRDDGALELFATYGLKRESVHMTTLRLGEGLVGLIAAQAEPLSLEDAPSHPGF
                     AYRPETGEDPFKAFLGVPVLRAGQTLGVLVVQNREARIYSDDEIEAMLTTATILAEMI
                     ATSEFDTLIKPGQDIDLRRPRSFTGTGFTDGIALGQVVLHDPRVVVTNFIAEDTEQET
                     RRLDDALATMRVGIDDMLSHGDMASGTEHRDILETYRMFANDRGWVERLGEAIANGLT
                     AEAAVERVQNDTRARMLRSTDPYIRDRLHDFDDLANRLLRVLTGDGTATTQRELPENA
                     ILIARNMGPAELLEYDRTRLRAIVLEEGGATAHVAIVARSLGLVAVGQADNIVSVSEN
                     GDDIIVDGPAGTVHLRPTKELQQTYVDKVRVSAKRRAHYLEFKDKPSVTRDGVAITLL
                     HNSGLVADLPMLADTGAEGVGLFRTELQFMIASHLPKVGEQIALYREAIRLSEGKPIV
                     FRLLDVGGDKVIPYLRSAPEENPAMGFRSLRLALDRPGLLRTQVRALLAAADGGPMKI
                     LVPMVTETWEFVETKKVVQLELERLVRSGGTPPSRLELGAMIEVPSLLFELDHVLPEA
                     DFVSIGSNDLIMFLNAADRANSRVSKAYDPIALPRLRALRHIVDMARRYEVPITMCGE
                     LAGRTVEALALMAIGMTRLSMSPPAVGPIKEMVMGMELRPIQAAVAAALGEGQAGVGV
                     RELLMDLADKQGLAV"
     gene            4441..5517
                     /gene="prfA"
                     /locus_tag="VHZ56_04360"
     CDS             4441..5517
                     /gene="prfA"
                     /locus_tag="VHZ56_04360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016736489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEX4297233.1"
                     /translation="MAALPEDKLMQLEKRFDSVEAALSAGPSAEAYVRLSKEYAELEP
                     VVRPITTWRQAVNELRSAEELANAGDAELAEMAAVEIADLRPRIARMEDEIRVLLLPK
                     DAADDKNVIVELRAGTGGDEAALFAGDLLRMYQRYADLHGWKFALMEESPGDAGGYKE
                     AIASISGKGAYARLKYESGVHRVQRVPATESQGRIHTSAATVAVLPEVEEIDIDIRPE
                     DIRIDTMRSSGAGGQHVNTTDSAVRITHLPTGIVVTSSLKSQHQNRAQAMVVLRARLY
                     EEQRNARDTARSDTRREQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLEKVIAGDA
                     LDELVEALITEHQAAQLAAMEGVN"
     gene            5541..6383
                     /gene="prmC"
                     /locus_tag="VHZ56_04365"
     CDS             5541..6383
                     /gene="prmC"
                     /locus_tag="VHZ56_04365"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEX4297234.1"
                     /translation="MGLAWRQVRDRFRAAGLDTPELDARMLAQKAFGLDSMALVRRER
                     ETVPEAGARDLEQFAQRRLVGEPVSRIIGEREFWGLRFGLNDATLDPRPETEMLVEEA
                     IALLEPRAGQRLVDLGTGSGAVVVSIVNALPKARAFATDIAEDAVVMAHANAQRHGVA
                     ARIEFRRGSWWQAVPHTELFDLIVSNPPYIASEAIETLMPEVRVFDPRAALDGGFDGL
                     EAYRAIAAQAARRLNPGGAMLLEIGAGQGATVGRILARAGFGRVEVLKDLAGLDRVVS
                     ATHS"
     gene            6701..7393
                     /locus_tag="VHZ56_04370"
     CDS             6701..7393
                     /locus_tag="VHZ56_04370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4167 domain-containing protein"
                     /protein_id="HEX4297235.1"
                     /translation="MRPNQNNNNNNNKNRQRSRNNNGGRKHVNPLSRNFESNGPDVKV
                     RGNASHVAEKYLQLARDAQSSGDPVLAENYLQHAEHYFRIVAAAQPQNQQRDQFGQVV
                     EQDEDDDFPPMNDRFASPEPPQPQFRPPQPDQPGFTPEADDSGEAQPQAAAPEAESGG
                     NEDGQSFAAQGQGENGGEGRRHRDRNRRRRGRGNGEGGPVNGADPGNAPQPDVGELPA
                     FLTAGGPTTVGE"
     gene            complement(7437..8114)
                     /locus_tag="VHZ56_04375"
     CDS             complement(7437..8114)
                     /locus_tag="VHZ56_04375"
                     /inference="COORDINATES: protein motif:HMM:NF014906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator
                     C-terminal domain-containing protein"
                     /protein_id="HEX4297236.1"
                     /translation="MAVTRDDVVQTALQLLQEVGLDGLTLRRLATELGISAPTLYWHV
                     RDKRELLDLMADTMVRQQRATQPPFPPDLAWDAKIAESMRRQYQAILAYRDGARVVAG
                     NRPTEAALPMIESYMKLWVDAGFSPDEALATILTFGDFIAGSALEFQAEIERHRRQAP
                     ERIAELRHTMASYPTLQAAAQGRVAGAEAESSFERGLALMMAGLRARQAELQAAQNPG
                     ARRVARH"
     gene            8196..9188
                     /locus_tag="VHZ56_04380"
     CDS             8196..9188
                     /locus_tag="VHZ56_04380"
                     /inference="COORDINATES: protein motif:HMM:TIGR01188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4297237.1"
                     /translation="MDGSSVGSEPAVEVHGLTKRFKEVEAVKGIDLSVRTGETFGFLG
                     PNGAGKSTTIKILCTLANATSGTARVAGHDVATERDAVRRSIGLVFQEPTLDSYLTAE
                     QNLNFHGELYGVDRHTAAARRKDVLDMVGLWDRKDHLVQTFSGGMRRRLEIARGLLHS
                     PKVLFLDEPTIGLDPQTRASIWQYLKELHKREEITVFVTTHYMDEAENCDRIAIIDQG
                     RIVALDTPAELKAGVGKDRVQIATADDVAAIGALKARFGLEARMVEGLVTFSVADGAA
                     FVPQLFDKLGVAIKSVAVARPTLDDVFLNFTGTSLRDAEEKGSKFNPRAAAFRR"
     gene            9191..10048
                     /locus_tag="VHZ56_04385"
     CDS             9191..10048
                     /locus_tag="VHZ56_04385"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4297238.1"
                     /translation="MSQASIASVVVPKGGLVHEMRAAFVVWQREMIRFRRDPARVISS
                     VIQPLLFLFVLGGGLSSLVQAGTGGLDFKTFLFPGVLSMSVLFTASFAGISIVWDREF
                     GFLREMLVAPVSTAAILTGKCFGGASVATIQSVVVLLLAGLVGVPYDPLMMLELLVLL
                     FIMSFMITALGLLLASRVKQVQSAMPLVQMIITPLMFLSGALFPLSRLPAWLTVVTHI
                     NPMTYAVEPVRAVVFARLTMPDQARQILDPGIWWGSFELPIWMQIGLVVVAALVLLSL
                     TVRFFSRTE"
     gene            10291..>11393
                     /locus_tag="VHZ56_04390"
     CDS             10291..>11393
                     /locus_tag="VHZ56_04390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
                     /protein_id="HEX4297239.1"
                     /translation="MNIEKYTERARGFIQSAQQSALSRGHQQFAPVHLLKVLMDDDQG
                     LGSGLIDRSGGDSKAVRAGVEAALKKIPVVSGDNGQVYLSRELARVFDTAESAAQKAG
                     DSFVTVERLLLALVIEKDTDAGKILSSAGVTATALNGAIEAIRKGRTADSASAESQYD
                     ALKKYARDLTQAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAE
                     GLAIRIVNGDVPESLKGKSLMALDLGALIAGAKYRGEFEERLKAVLSEITAAEGKIIL
                     FIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRF
                     QPVFVSEPTVEDTISILRGLKEKYELHHGIRIS"
BASE COUNT         1896 a         3602 c         4174 g         1721 t
ORIGIN      
        1 tgggggcggc gtcgatgccg gtgaccgtgg caccgagccg cgtcagcggc tcggtgagga
       61 ggccgccgcc gcagccgatg tcgaggatgc tgaggccggc gagcggacga cgctcggtgc
      121 cgtcccggga gaaccgggtg agggcccagt cgcggatgta ggcgagccgc accgggttga
      181 agcgatgcag cggcttgaaa tcgccctcgg ggtcccacca atcgtcggcc atggccgaaa
      241 atttggcgat ttcatcggga ttgatggtgg tttcggtcat cgtcgcgttc tacacccgcg
      301 gctcggatcc gtgaaagagc cgccacagcc agcgcgcgcc gctgcgctcg agaacgcccg
      361 acagccgata ggcatgccgg gtggtgccgg tggcggcggt gaccaccggc gccccctcgg
      421 cgcaaaacca gcccaccgaa cccgcggccg agatgtcgag ccggtcccag gcccaggtat
      481 agcggtcggc gcgggcatgg agcccggcga tcagcgcccg gatcgcctcg cgtccgtcgg
      541 cgacttcgcc gggttccgag ccgaccagca tggcggcggg ggcgaattcg tcggcaaggc
      601 ccgggttgcg ctcgaacatc aaggtgccga gccgctccac cgtcgcccgg atttccgtct
      661 tggcgttcat tgtgctgatc cttgcacggc ccccgccaat gtggcatgtc cgccgccaat
      721 tccaaagcgt accgccgggt tcagcgtccg gcgccgggga gcatagtggc ccgtgtcgtg
      781 atgaagtttg gcggcacgtc ggtcgccaat gtcgagcgca tccggcaggc ggcgcggcac
      841 gtcaagcgcg aggtcgacgc cggcaaccag gtgacggtgg tggtctcggc gatgtcgggc
      901 aagaccaacg agctggtcgg ctgggtgaac gagggcagca agctgcacga cgctcgcgaa
      961 tacgacgccg tagtcgcctc gggcgagcag gtcaccgccg gtttgatggc aatcgtgctc
     1021 agcgaaatgg gcatcccgtc gcgctccttc cagggctggc aaatccccat ccgcaccgac
     1081 gacgcgcatg gtgcggcacg catcgccgag atcgatccga cggagctcaa caagcggatg
     1141 gccgagggcg tcgtcccggt ggtcaccggg tttcagggca tcgccccgtc cggccgcgtc
     1201 acgacgctcg gccgtggcgg ttcggacacg tcggcggtgg cgattgcggc ggcggtcggg
     1261 gccgatcgct gcgatatcta caccgacgtc gacggcgtct acaccaccga cccgcgggtc
     1321 gatccgaagg ccaagcgtct caaccgggtg gcgttcgagg aaatgctcga aatggcttcg
     1381 ctcggcgcca aggtgctgat gatccgctcg gtcgagatgg cgatggcgca caaggtgcgg
     1441 ctggtcgtgc gctcgacgtt cgatgatccg gaggcgccgc agatcggccc ggacggactg
     1501 cccggcgtgc ccggcacgct ggtttgcgat gaggatgaga tcatggaaaa gcagatcgtt
     1561 tcggccgtca cgctggccaa ggcggaagcc aagatcacgc tgcgcgacgt caaggacagg
     1621 ccgggcgtcg ccgcggcggt attcggggcg ctggcggacg aatcgatcgt cgtcgacatg
     1681 atcgtgcaga acatttcgga cgacggctcg gtcaccgaca tcaccttcac ggtgcccgac
     1741 agcgagtgcg acaagtcggt acgggtgctg gaagccgcca agaagtcggg tgcaatcgat
     1801 taccagcgcg tcaccggcgc caagggcggg gcgaaagtgt cggtggtcgg ggtggggatg
     1861 cgcaaccatg ccggcgtcgc ggcgtcgatg ttcaaggcgc tggccgacaa gggcatcaac
     1921 atccagctga tcaccacctc ggaaatcaag acctcggtgc tgatcgacga cgaatatgcc
     1981 gagcttgcgg tccgggccct ccatacgtat tacggactcg ataagccggc cgcctgaggc
     2041 tcaaggcccg gcaaccagat ctggcgcgca tcgttttcgc gggaggcccg gcccttccgg
     2101 acggtgccga aggaggcggt gcggggccgc gaagagggga tggcgacagg gatcggcggg
     2161 ccgcgcgtgc tgctgcggca gttgcgcgaa accatggcgg agccgctggc gtcgcaggac
     2221 cgcctcgaca agatcgtcac cctgatcgcc acgaacatgc aggccgacgt ctgctcgttc
     2281 tacgtgctgc gcgacgacgg cgcgctggag ctgttcgcga cgtacggcct gaagcgtgaa
     2341 tcggtgcaca tgacgacgct gcggctcggc gaggggctgg tcgggctgat cgccgcgcag
     2401 gccgagccgc tgagcctcga ggatgcgccg tcgcatcccg gctttgccta tcgcccggag
     2461 accggcgagg atccgttcaa ggcgttcctc ggcgtgccgg tgctgcgcgc cggccagacg
     2521 ctgggggtgc tcgtggtgca gaaccgcgag gcgcgcatct acagcgacga cgagatcgag
     2581 gccatgctga cgacggcgac gatcctcgcc gagatgatcg cgacgtcgga gttcgacacg
     2641 ctgatcaagc cggggcagga catcgacctg aggcggccac gcagcttcac cggcaccggc
     2701 ttcaccgacg gtatcgcgct ggggcaggtg gtgctgcacg atccgcgtgt ggtggtgaca
     2761 aatttcatcg ccgaggacac cgagcaggag acgcgccggc tcgacgatgc gctggcgacg
     2821 atgcgggtcg gcatcgacga catgctgagc catggcgaca tggcgtcggg gacggagcac
     2881 cgcgatatcc tcgagaccta ccggatgttc gccaacgatc gcggctgggt ggagcggctg
     2941 ggcgaggcga tcgccaacgg gctgacggcg gaggcggcag tcgagcgggt gcagaacgat
     3001 acccgggccc ggatgctgcg ctcgaccgat ccctatatcc gcgaccggct gcacgatttc
     3061 gacgatctcg ccaaccggct gctgcgggtg ctgaccggcg acggcacggc gacgacgcag
     3121 cgggagctgc cggagaacgc cattctgatc gcccgcaaca tggggccggc cgagctgctc
     3181 gaatacgacc gcacgcggct gagggcgatc gtgctcgagg aggggggcgc cacggcgcac
     3241 gtggcgatcg tggcgcgctc gctggggctg gtggcggtgg ggcaggccga caacatcgtc
     3301 tcggtcagcg agaacggcga cgacatcatc gtcgacgggc cggcgggaac cgtgcacctg
     3361 cggccgacaa aggagctgca gcagacctat gtcgacaagg tgcgggtcag cgccaagcgg
     3421 cgggcgcatt atctcgagtt caaggacaag ccgtcggtga cgcgcgacgg cgtggcgatc
     3481 acgctgctgc acaattccgg gctggtcgcc gacctgccga tgctggcgga taccggggcc
     3541 gaaggcgtcg ggctgttccg caccgagctg cagttcatga tcgcctcgca cctgcccaag
     3601 gtgggcgagc agatcgcgct ctatcgcgag gcgatccggc tgagcgaggg caagccgatc
     3661 gtgttccggc tgctcgatgt cggcggcgac aaggtgatcc cgtatttgcg gtcggcgccg
     3721 gaggaaaatc cggcgatggg ctttcgctcg ctgcggctgg cgctcgaccg gccagggctg
     3781 ctgcggacgc aggtgcgggc gctgctggcg gcggccgatg gcggaccgat gaagatcctg
     3841 gtgccgatgg tcaccgagac gtgggagttc gtcgagacca agaaggtggt gcagctcgaa
     3901 ctcgagcggc tggtgcggtc gggcggcacg ccgccgtcgc ggctcgaact cggcgccatg
     3961 atcgaggtgc cgtcgctgct gttcgagctc gaccacgtgc tgccggaggc cgatttcgtc
     4021 tccatcgggt cgaacgacct gatcatgttc ctcaatgccg ccgaccgggc gaattcgcgg
     4081 gtcagcaagg cctacgatcc gatcgcgctg ccacggctgc gggcgctgcg ccacatcgtc
     4141 gacatggcgc gccgctacga ggtgccgatc accatgtgcg gcgagctcgc cgggcgcacc
     4201 gtcgaggcgc tggcgctgat ggcgatcggc atgacgcggc tcagcatgag cccgcccgcc
     4261 gtcggtccga tcaaggaaat ggtgatgggg atggagttga ggccgatcca ggcggcggtg
     4321 gcggcggcgc tgggcgaagg ccaggccggc gtcggcgtgc gtgagctgct gatggatctg
     4381 gcggacaagc aggggctggc ggtttgatct gcgctgcgat ggtagtgtag tccacgcccg
     4441 atggccgccc ttcccgaaga caagctgatg caactggaga agcgcttcga cagcgtcgag
     4501 gcggcgctgt cggcaggtcc gtcggcggag gcgtatgtgc ggctcagcaa ggaatatgcc
     4561 gagctcgagc cggtggtgcg gccgatcacg acgtggcggc aggcggtgaa cgagctgcgt
     4621 tcggccgagg aactggccaa tgcgggcgat gccgagctgg ccgagatggc ggccgtggaa
     4681 atcgccgacc tcaggccgcg catcgcgcgg atggaagacg agatccgcgt gctgctgctg
     4741 cccaaggacg cggcggacga caagaacgtc atcgtcgaac tgcgggccgg gaccggcggc
     4801 gacgaggcgg cgctgtttgc gggcgacctg ctgcgcatgt accagcgcta cgccgacctg
     4861 catggctgga aattcgcgct gatggaggaa agtcccggcg atgccggcgg ctacaaggag
     4921 gcgatcgcct cgatctcggg gaagggcgcc tacgccaggc tcaaatacga gagcggcgtg
     4981 caccgggtgc agcgggtgcc ggcgacggaa tcgcagggcc gcatccacac ctcggcggcg
     5041 acggtggcgg tgctgccgga ggtcgaggag atcgacatcg acatccggcc cgaggacatc
     5101 cggatcgaca ccatgcgctc gtcgggggcc ggggggcagc acgtcaacac caccgattcg
     5161 gcggtgcgca tcacgcacct gccgaccggc atcgtcgtca cctcctcgct caagagccag
     5221 caccagaacc gggcgcaggc gatggtggtg ctgcgggcgc ggctctacga ggagcagcgc
     5281 aacgcgcgcg acacggcgcg ttccgatacg cggcgcgagc aggtgggctc gggcgaccgg
     5341 tcggagcgca tccggaccta caatttcccg caggggcggg tcaccgacca ccggatcaac
     5401 ctgacgctct acaagctcga gaaggtcatc gccggcgatg cgctcgacga gctggtcgag
     5461 gcgctgatca ccgagcacca ggcggcgcag ctggccgcca tggagggggt caactgagcg
     5521 agggcgcgaa cgggccggcg atgggccttg cctggcggca ggtgcgcgat cgttttcgcg
     5581 cggccgggct ggatacgccc gaactcgatg cccggatgct ggcgcagaaa gcgttcgggc
     5641 tcgactcgat ggcgctggtg cggcgcgagc gcgagaccgt gcccgaagcc ggggcgcggg
     5701 acctcgagca gttcgcgcag cgccggctgg tgggcgagcc ggtgagccgg atcatcggcg
     5761 agcgcgagtt ctgggggctg cgcttcgggc tcaacgacgc gacgctcgat ccgcggccgg
     5821 aaaccgagat gctggtcgag gaggcgatcg cgctgctcga gccgcgcgcc gggcagcggc
     5881 tggtggacct cggcacgggc agcggcgcgg tggtcgtatc catcgtcaac gccctgccga
     5941 aggcgcgggc ctttgccacc gacatcgccg aggacgccgt ggtgatggcg cacgccaacg
     6001 cgcagcggca cggggtggcg gcgcgaatcg agttccggcg cggctcgtgg tggcaggcgg
     6061 tgccgcacac cgagctgttc gatctgatcg tgtccaatcc gccctatatc gcgagcgagg
     6121 cgatcgagac gctgatgccg gaggtgcggg tgttcgatcc gcgggcggcg ctcgacgggg
     6181 gattcgacgg gctcgaggcc taccgcgcca tcgccgcgca ggcggcgcgg cggctcaatc
     6241 cgggcggcgc gatgctgctc gagatcggcg ccgggcaggg ggcgacggtc ggccgcatcc
     6301 tggcgcgggc cggattcggg cgggtcgagg tgctcaagga cctggcgggg cttgatcggg
     6361 tcgtgtcggc tacccattct tgaggatagc gagagtttgc cgggccgccg cgggcatttt
     6421 gtgcttggaa aggcagcgcg aaccggctag cctcctgatg ctgtcagcgg cgccggttga
     6481 gcgccagggt gacggccacc cgctcatcgg cgatgctgga ttgccagcaa gggtatcccg
     6541 gattggaccc ctgcccgacg tgatgagcca aaagtggttc agcctgaaca gctctcggac
     6601 aagatcgcgc cccgaaggcc gccccaatgg gcgccaatgg tgcagcaggc ctgagactcg
     6661 caacttccct aggctcattt ttcaaggcga ctagcgaccg atgagaccaa accagaataa
     6721 caacaacaac aacaacaaga accgccagcg cagccggaac aacaatggcg ggcgcaagca
     6781 cgtcaatccg ctgagccgga acttcgagtc caacggaccg gacgtgaagg tgcgcggcaa
     6841 cgcctcgcat gtggcggaga aatatctgca gctggcgcgc gacgcgcagt cgagcggcga
     6901 tccggtgctg gcggagaact acctgcagca cgccgagcat tatttccgca tcgtggcggc
     6961 ggcgcagccg cagaaccagc agcgcgacca gttcggccaa gtggtcgagc aggacgagga
     7021 cgatgatttc ccgccgatga acgaccgctt cgcctcgccg gagccgccgc agccgcagtt
     7081 ccggccgccg cagccggacc agccgggttt tacccccgag gcggatgaca gcggcgaggc
     7141 gcagccgcag gcggcagcgc cggaggccga gtccggcggc aacgaggacg gccagtcctt
     7201 cgcggcgcag gggcagggcg aaaatggcgg cgagggccgc cggcatcgcg accgcaaccg
     7261 gcggcgccgc ggccgcggca atggcgaagg cggcccggtc aacggcgccg atcccggcaa
     7321 cgcgccgcag cccgatgtcg gcgaattgcc ggcgttcctc accgccggcg ggccgaccac
     7381 ggtcggcgag taagccagtt tcacaaccgc cgggccgcga tgcccggcgc gggtcttcag
     7441 tgccgcgcca cgcgccgggc gccgggattt tgcgcggcct gcaattctgc ctgccgggcg
     7501 cgcaggccgg ccatcatcag agcgagcccg cgctcgaagc tcgattcggc ttcggcgccg
     7561 gcgacccgtc cctgcgccgc cgcctgcagc gtcggatagg acgccatggt gtggcgcaac
     7621 tcagcgatcc gctctggcgc ctggcgccgg tggcgctcga tctcggcctg gaattcgagg
     7681 gccgagccgg cgatgaagtc gccgaaggtg aggatcgtcg ccagcgcctc gtcgggcgaa
     7741 aatccggcgt cgacccagag cttcatgtaa ctttcgatca tcggcagcgc cgcctcggtg
     7801 ggacggttac cggcgaccac gcgggcgccg tcgcggtaag cgaggatcgc ctggtactgc
     7861 cggcgcatgc tctcggcgat ctttgcatcc caggcgagat cgggcggaaa gggcggctgg
     7921 gtggcgcgct gctggcggac catggtgtcg gccatgaggt cgagcaattc gcgcttgtcg
     7981 cgcacgtgcc agtaaagggt gggggcagag atgccgagct cggtggcgag ccgccggagc
     8041 gtgagcccgt cgaggcccac ctcctgcagc agctgcaggg ccgtttgcac cacgtcgtcg
     8101 cgggtcaccg ccatctgtcc agtcccctct tgcttcccta acgtcgttcg ggtaatagca
     8161 catctaacaa cgttagagaa cccccggagc ggatcatgga cggatcatcc gtcggcagcg
     8221 agccggccgt cgaagtccac ggcctcacca agcgcttcaa ggaggtcgag gccgtcaagg
     8281 gcatcgacct cagcgtgcgg accggcgaga cgttcggctt tctcgggccc aacggggccg
     8341 gcaagtcgac caccatcaag atcctctgca cgctggccaa tgcgacctcg ggcacggcga
     8401 gggtggccgg ccacgacgtc gccaccgagc gcgacgcggt gcggcgctcg atcgggctgg
     8461 tgttccagga gccgacgctc gacagctacc tgacggccga gcagaacctc aatttccacg
     8521 gcgagctcta cggcgtcgac cgccacacgg cggcggcgcg acgcaaggac gtgctcgaca
     8581 tggtcgggct gtgggaccgc aaggaccatc tggtgcagac gttctcgggg ggcatgcgac
     8641 ggcggctcga gatcgcgcgc gggctgctgc attcgccaaa ggtgctgttc ctcgacgagc
     8701 cgacgatcgg gctcgatccg cagacgcggg cctcgatctg gcagtacctc aaggagctcc
     8761 acaagcgcga ggagatcacg gtgtttgtca ccacccacta catggacgag gccgagaact
     8821 gcgaccgcat cgcaatcatc gaccagggcc ggatcgtggc gctcgatacg cccgcggaac
     8881 tcaaggccgg ggtcggcaag gaccgggtgc agatcgcgac cgccgacgac gtggcggcga
     8941 tcggggcgct caaggcgcgg ttcgggctcg aggccaggat ggtcgagggg ctggtgacgt
     9001 tttcggtcgc cgacggcgcc gccttcgtgc cgcagctgtt cgacaagctc ggggtggcca
     9061 tcaagtcggt ggcggtggcc cgccccacgc tcgacgacgt gttcctcaac ttcaccggca
     9121 cctcgctgcg cgatgccgag gagaagggca gcaagttcaa cccgcgtgcc gcggcgttcc
     9181 ggagatgacc atgtcccagg cttccatcgc gtcggtcgtc gtgcccaagg gcgggctggt
     9241 gcatgagatg cgcgccgcgt tcgtggtctg gcagcgcgag atgatccgct tccggcgcga
     9301 tccggcgcgg gtcatctcgt cggtgatcca gccgctgctg ttcctgttcg tgctcggcgg
     9361 cggactgagc tcgctggtgc aggcggggac cggcgggctc gacttcaaga ccttcctgtt
     9421 ccccggcgtg ctgtcgatgt cggtgctgtt caccgcctcg ttcgccggca tctcgatcgt
     9481 ctgggaccgc gagttcgggt ttttgcgcga gatgctggtg gcgccggtgt cgacggcggc
     9541 gatcctcacc ggcaagtgct tcggcggggc cagcgtggcg acgatccagt cggtggtggt
     9601 gctgctgctc gccgggctgg tgggggtgcc gtacgatccg ctgatgatgc tcgagctgct
     9661 ggtgctgctg ttcatcatga gcttcatgat cacggcgctg gggctgctgc tggccagccg
     9721 ggtcaagcag gtgcagtcgg cgatgccgct ggtgcagatg atcatcacgc cgctgatgtt
     9781 cctcagcggg gcgctgttcc cgctgagccg gctgccggcg tggctgacgg tggtcaccca
     9841 catcaacccg atgacctatg cggtcgagcc ggtgcgggcg gtggtgttcg cgcgcctcac
     9901 catgccggac caggcgcggc aaatcctcga tcccggcatc tggtggggca gcttcgagct
     9961 gccgatctgg atgcagatcg ggctggtggt ggtcgcggcg ctggtgctgc tgtcgctgac
    10021 ggtgcggttt ttcagccgga cggagtgatc cgcgtccgct gtcaaccatt cgcaaaggcc
    10081 ggctcgtccg gcctttttct ttggccggcg cttcctatat tttgagcgaa gtcaggggag
    10141 cgtgccgatt ccgggcgttt cccaatccaa cgcttcgagc gaccgaacct gcgctgggtt
    10201 actgggtcgc gcgtcgaacc ggaaaagtcg cagacttttc ctgacgcgct cccgggacgg
    10261 gcaggacggc gcggcaaaag gagagttgcc ttgaacatcg aaaaatacac cgagcgggcg
    10321 cgcggattca tccagagcgc gcagcagtcg gcgctgagcc gcggccacca gcagttcgcg
    10381 ccggtgcacc tgctgaaggt gctgatggac gacgaccagg ggctgggctc cgggctgatc
    10441 gaccgcagcg gcggcgacag caaggcagtg cgcgccggcg tcgaagcggc gctgaagaaa
    10501 atccccgtcg tttccggcga taacggccaa gtctacctga gccgcgagct ggcacgggtg
    10561 ttcgacaccg ccgaaagcgc ggcgcagaag gccggcgatt cgttcgtcac ggtcgagcgg
    10621 ctgctgctgg cgctagtgat cgagaaggac accgatgcgg gcaagatcct cagctcggcg
    10681 ggggtgaccg ccactgcgct caacggcgcc atcgaggcca tccgcaaggg ccgtacggcg
    10741 gattcggcat cggcggagtc gcagtacgac gcgctcaaga aatatgcgcg cgacctgacg
    10801 caggcggcgc gcgacggcaa gctcgacccg gtcatcgggc gggacgagga aattcgccgc
    10861 accatccagg tgctgagccg ccggaccaag aacaacccgg tgctgatcgg cgagccggga
    10921 gtcggcaaga ccgccatcgc cgaggggctc gccatccgca tcgtcaacgg cgacgtgccg
    10981 gagagcctca agggcaagtc gctgatggcg ctcgacctcg gggcgctgat cgccggcgcg
    11041 aaatatcgcg gcgagttcga ggagcggctg aaggccgtgc tttccgagat caccgcggcc
    11101 gagggcaaga tcatcctgtt catcgacgag atgcacacgc tggtcggcgc cggcaaggcg
    11161 gacggggcga tggacgcctc gaacctgttg aagccggcac tggcgcgcgg cgagttgcac
    11221 tgcgtcggcg cgacgacgct cgacgaatat cgcaagcacg tcgaaaagga tgcggcgctg
    11281 gcgcggcggt tccagccggt gttcgtctcg gagccgacgg tcgaggacac gatctcgatc
    11341 ctgcgcgggc tcaaggagaa atacgagctg caccacggca tccggatttc gga
//
LOCUS       DATAZA010000173         2596 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2920295, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000173 DATAZA010000000
VERSION     DATAZA010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2596
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2920295"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..333
                     /locus_tag="VHZ56_04395"
     CDS             <1..333
                     /locus_tag="VHZ56_04395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX4297240.1"
                     /translation="PISLETPIGDEEDSNLGDFIPDVNAVQPIDAAIQSNLRETTTRV
                     LASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSR
                     KLRSFLDN"
     gene            392..697
                     /locus_tag="VHZ56_04400"
     CDS             392..697
                     /locus_tag="VHZ56_04400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyU family transcriptional regulator"
                     /protein_id="HEX4297241.1"
                     /translation="MSFWKNLFGGGGGGAAEPAAAPGEEYKGFTIRATPAAVGSEYQL
                     AGTIEKTVGGEPRSYKFVRADRMNSRDEAVSFALAKGRQIVDEQGERMFAPATPKTN"
     gene            766..996
                     /locus_tag="VHZ56_04405"
     CDS             766..996
                     /locus_tag="VHZ56_04405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297242.1"
                     /translation="MPKKPSAHAEYVLFDVVYEDGTQRSNRKVPGELLGGLDGDEPAQ
                     AEIEAQDRAIAEKSRMPPLSIKSIRRSGAKKP"
     gene            complement(993..1160)
                     /locus_tag="VHZ56_04410"
     CDS             complement(993..1160)
                     /locus_tag="VHZ56_04410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297243.1"
                     /translation="MFQPSPSLSRRPRRFWLAEALLVAAILAFGAFAALSDSRLSPQQ
                     LLNGFSEIVGR"
     gene            complement(1282..2331)
                     /locus_tag="VHZ56_04415"
     CDS             complement(1282..2331)
                     /locus_tag="VHZ56_04415"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007874576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX4297244.1"
                     /translation="MQIGLYSFAENTVDVLNGNHLQSPAERLQDLLEEIELADQLGLD
                     FYGLGEHHRPDFVASAPVTILAAAAARTKTIRLSTAVTVLSSDDPIRVWQQFSTLDLL
                     SNGRAEIMAGRGSFVESFPLFGYDLNDYDDLFEEKLQELLAIRQGGKVSWAGSAHTKP
                     IPGVEIYPKPVQQPLPLWIAVGGTPNSVARAAYFALPLMIAIIGGRPQQFTPLVQLYR
                     DTAQKMNHDLATLPVGISSHGFIAADSQDAMDTAFPAHQAAMSRIGKERGWPPTTREQ
                     FEAGASPHGAYFMGSPQQVIDKILMQHEWFHHDRFGLQLSVGTLPHDKVMQAIELFGT
                     VVKPAVNKALAPQPA"
BASE COUNT          485 a          797 c          922 g          392 t
ORIGIN      
        1 ccgatcagcc tcgaaacgcc gatcggcgac gaggaggatt ccaacctcgg cgacttcatt
       61 cccgacgtga atgcggtgca gccgatcgac gcggcgatcc agtcgaacct gcgcgagacc
      121 acgacccgcg tgctggcgtc gctgacgccg cgcgaggagc gcgtgctgcg catgcgcttc
      181 ggcatcggca tgaacaccga ccacacgctc gaggaagtcg ggcagcagtt ctcggtgacc
      241 cgcgagcgca tccgccagat cgaagccaag gcgctgcgca agctcaagca cccgagccgc
      301 agccggaagc tgagaagctt cctcgacaac tgacccgaca attcgaaaga aggcggcgtc
      361 agccgccttc tccttttttg aggagagccc gatgtccttc tggaaaaatc tcttcggcgg
      421 cggcgggggt ggggcggctg agcccgctgc ggcgccgggc gaggagtaca agggcttcac
      481 catccgggcg acgccggcgg ccgtcggcag cgagtatcag cttgccggga caatcgagaa
      541 gacggtcggc ggcgagccca ggagctacaa gttcgtgcgt gccgaccgca tgaattcgcg
      601 cgacgaggcc gtcagcttcg cgctggcgaa gggccggcag atcgtcgatg agcagggcga
      661 acggatgttc gcgccggcaa cgccaaaaac caactagaac agtccggcgt ttaccgcgga
      721 cgcttgcggc cgggcctgac ggcgccggcc aacggagaag tcatcatgcc caagaaaccc
      781 agtgcccacg cggaatacgt gctgttcgac gtggtctatg aagacggcac gcagcgctcg
      841 aaccgcaagg ttccgggcga actgcttggc gggctcgacg gagacgagcc ggcgcaggcc
      901 gagatcgaag cgcaggaccg cgccattgcc gagaagtcgc ggatgccgcc gctgtcgatc
      961 aagtcgatcc gccggtcagg cgcgaaaaag ccctagcgac cgacgatttc cgaaaagccg
     1021 ttgagcagct gctgcggcga gagccgcgaa tcggacagcg ccgcgaaggc gccaaacgcc
     1081 aggatcgccg cgaccagcaa cgcctcggcc agccagaacc ggcggggacg gcgggaaaga
     1141 ctgggactgg gctggaacat gacgcggttt ccgggtgggc tggcgacata acgcccaagg
     1201 ttaagaattg gttctattgc ccgctcgtgg cgccatgtgg gcccgatctt ggcaaattct
     1261 ggaccggggc ggcgcgcctg ttcaggctgg ttgcggagcc agcgccttgt tgaccgccgg
     1321 cttgaccact gtgccgaaca gctcgatcgc ctgcatgacc ttgtcgtgcg gcagggtacc
     1381 caccgacagc tgcaggccga agcggtcgtg gtggaaccac tcgtgctgca tcaggatctt
     1441 gtcgatcacc tgctgcggcg agcccatgaa ataggcgccg tgcggactgg cgccggcctc
     1501 gaactgctcg cgcgtggtcg gcggccagcc gcgttccttg ccgatccggc tcatcgccgc
     1561 ctgatgggcg gggaaggcgg tgtccatggc gtcctggctg tcggcggcga tgaagccgtg
     1621 cgaggagatg ccgacaggca gcgtggcaag gtcgtggttc atcttctgcg cggtgtcgcg
     1681 atagagctgg accagcgggg taaattgctg cggccggccg ccgatgatgg cgatcatcag
     1741 gggcagggcg aaatacgccg cgcgcgccac cgaattgggg gtaccgccga cggcgatcca
     1801 gagcggcagc ggctgctgca ccggcttggg gtagatctcg acgccgggaa tgggcttggt
     1861 gtgcgcggac ccggcccagc tgaccttgcc gccctggcgg atcgccagca gctcctgcag
     1921 cttttcctcg aacaggtcgt cgtagtcgtt gaggtcgtag ccgaagagcg ggaagctttc
     1981 gacgaacgag ccgcggccgg ccatgatctc ggcgcggccg ttcgacaaca ggtcgagcgt
     2041 cgagaactgt tgccagacgc ggatcggatc gtcggagctg agcacggtca cggcggtcga
     2101 cagccggatg gtcttggtcc gtgccgcggc cgcagcaagg atcgtcaccg gcgccgaggc
     2161 gacgaagtcc ggccggtgat gctccccgag gccatagaaa tcgaggccga gctggtcggc
     2221 gagttcgatc tcctcgagca ggtcctgcag ccgctcggcc ggcgattgca ggtggttgcc
     2281 gttgaggacg tcgacggtgt tttcggcgaa cgaataaaga ccgatctgca tggctggggc
     2341 tccgctgccg tcgcgcctag atgttggctt ggcgaggagc ttacaagaac gcacagcgaa
     2401 gtaaccggag aagcaacgcc cggcgttccg ctgtcccagg catcggggaa aagcaaaggc
     2461 cccggcggga gaaccggggc cttcgcaaga agcttcagag ggagggctga agcgtcgggg
     2521 ttacgctgtt actgggccgc cgacgaggtc gccggggcaa ccgacgaggc catcgacgaa
     2581 gcggtcaccg gggccg
//
LOCUS       DATAZA010000174         3456 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1643174, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000174 DATAZA010000000
VERSION     DATAZA010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3456
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1643174"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..737)
                     /locus_tag="VHZ56_04420"
     CDS             complement(<1..737)
                     /locus_tag="VHZ56_04420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018236145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX4297245.1"
                     /translation="MAENLSPRQIVAELDRYIVGQADAKRAVAVALRNRWRRQQLPEA
                     LRHEVTPKNILMIGPTGVGKTEISRRLAKLAQAPFIKVEATKFTEVGYVGRDVEQMIR
                     DLVENGISVLRDIRRDSVKQQAHEKAEERVLDALVGASAGSATRDSFRKKLRAGELDD
                     KDIEIELSGTPQQNGMFDIPGQPNVINIQEMIGKALGGKSQKRKVKVKDSHALLMADE
                     ADKLLDQDQLTREAVELVENHGIVFID"
     gene            complement(843..1400)
                     /gene="hslV"
                     /locus_tag="VHZ56_04425"
     CDS             complement(843..1400)
                     /gene="hslV"
                     /locus_tag="VHZ56_04425"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HEX4297246.1"
                     /translation="MPTNSDFPGWHGTTIVSVRKGNRVVIAGDGQVSVGNTVMKHNAR
                     KVRRLVGDKVIGGFAGSTADAFTLFERLEKKLEQYPDQLMRAAVELAKDWRTDRYLRH
                     LEAMMIVADKTDTLVLTGNGDVLTPDKGVIAIGSGGNYAQSAALALAENTDLDAESIA
                     RKAMKIAADICIYTNENVTLETIEA"
     gene            1522..2118
                     /gene="hisB"
                     /locus_tag="VHZ56_04430"
     CDS             1522..2118
                     /gene="hisB"
                     /locus_tag="VHZ56_04430"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018430533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HEX4297247.1"
                     /translation="MKPMRKAEIKRKTNETDIAVSVDLDGTGKYAMATGIGFLDHMLD
                     QLSKHSLIDMTVKAKGDLHVDFHHTAEDTGIALGEAVKKALGDKKGIRRYASADLVMD
                     GTLTRAALDVSGRPFLVWKVNFTAGKVGEMDTELFREWFQAFAMNAGITLHVENLYGD
                     NNHHIAESAFKALARALRDAVEIDPRAKDAIPSTKGSL"
     gene            complement(2185..2340)
                     /locus_tag="VHZ56_04435"
     CDS             complement(2185..2340)
                     /locus_tag="VHZ56_04435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297248.1"
                     /translation="MADNSDPHADAAPREAPSQGVFIGWLALALLAFAVIWAATGLLA
                     GATHGWQ"
     gene            2416..2796
                     /locus_tag="VHZ56_04440"
     CDS             2416..2796
                     /locus_tag="VHZ56_04440"
                     /inference="COORDINATES: protein motif:HMM:NF022400.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HEX4297249.1"
                     /translation="MTVYSIFEKPQGKAAKNRVPQVIPPVAVADRFSFLAAIFPPFYA
                     LFNGLWLVLVFWIVLALGLAYISRVIGTEAAAWLYVLVAVFIGFEAPAFRRDALLARG
                     YLWRGDAVAAAADLAERDFLARPK"
     gene            2793..3449
                     /gene="hisH"
                     /locus_tag="VHZ56_04445"
     CDS             2793..3449
                     /gene="hisH"
                     /locus_tag="VHZ56_04445"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018409004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEX4297250.1"
                     /translation="MTGGGVAIIDYGSGNLRSAAKAFERSVRALRADTPVIVTGDPEI
                     VRRADRIVLPGVGAFEDCMNGLGAVRGMREALEERVIKGGVPFLGICVGMQLMATEGH
                     EKGVYAGLNWILGPVVRLDPRGGLKVPHMGWNTLKFTRPHPLLANIPDGEAGLHAYFV
                     HSYHLAPTDDRELFATTEYGQPVTACVGRDNLFGTQFHPEKSQTLGLTLIENFLEWTP
                     "
BASE COUNT          527 a         1180 c         1130 g          619 t
ORIGIN      
        1 tcgtcgatga agacgatgcc gtgattctcc accagctcca ccgcctcgcg cgtcagctgg
       61 tcctggtcga gcagcttgtc ggcctcgtcg gccatcagca gcgcatggct gtccttgacc
      121 ttgaccttgc gcttctggct cttgccgccc agcgccttgc cgatcatctc ctggatgttg
      181 atgacgttgg gctggccggg gatgtcgaac atgccgttct gctgcggcgt gccgctgagc
      241 tcgatctcga tgtccttgtc gtcgagctcg ccggcccgca gcttcttgcg gaaggaatcg
      301 cgcgtcgccg aaccggcgct ggccccgacc agcgcgtcga gcacgcgctc ctcggccttc
      361 tcgtgcgcct gctgcttgac gctgtcgcgg cggatgtcgc gcagcaccga aatgccgttc
      421 tcgaccaggt cgcggatcat ctgctcgacg tcgcgcccga catagccgac ctcggtgaac
      481 ttggtcgcct cgaccttgat gaacggcgcc tgcgccagct tggccagccg ccgcgagatc
      541 tcggtcttgc cgacgccggt cggcccgatc atcaggatgt tcttgggcgt cacctcgtgg
      601 cgcagcgcct cgggcaactg ctggcgccgc cagcggttgc gcagcgccac ggccacggcc
      661 cgcttggcat cggcctgccc gacgatgtag cggtcgagct cggcgacgat ctgccggggg
      721 gaaaggttct cagccatggt gcctgctttc cggacgccct gggggaacgg cgcgtcctcg
      781 ctcccgccgc tgctggggcc gctgcccccg gccgggatat tgggttcgtt gagcatatct
      841 gatcaagcct cgatcgtttc gagcgtcacg ttctcgttgg tgtagatgca gatgtcggcg
      901 gcgatcttca tcgccttgcg ggcgatgctc tcggcgtcga ggtcggtgtt ttcggccagc
      961 gccagggccg ccgactgcgc ataattgccg cccgagccga tggcgatgac gcccttgtcg
     1021 ggggtcagca cgtcgccatt gccggtcagc accagcgtat cggtcttgtc ggcgacgatc
     1081 atcatcgcct cgaggtggcg caggtagcgg tcggtccgcc agtccttggc gagctcgacg
     1141 gcggcccgca tcagctggtc cgggtactgc tcgagctttt tctcgagccg ctcgaacaaa
     1201 gtgaaggcgt cggcggtgga gccggcaaag ccgccgatca ccttgtcgcc gacaaggcgc
     1261 cggaccttgc gggcattgtg cttcatcacc gtgttgccca ccgaaacctg gccgtcgccg
     1321 gcgatcacca cccggttgcc cttgcgcacc gagacgatgg tcgtgccgtg ccagccgggg
     1381 aagtcgctgt ttgttggcat tcaacactcc aaaaggattt ttccgtagat aaggtctgga
     1441 cgggcgaatg caatatcggc atttggcgat gaaggcctac cgacgctctc ggccggcacc
     1501 ccggcgaacg gtacaatcgg aatgaagcca atgcgcaagg ccgagatcaa gcggaagacc
     1561 aacgagaccg acatcgccgt gtcggtcgac ctcgacggca ccggcaaata cgccatggcg
     1621 accggcatcg gctttctcga ccacatgctc gaccagcttt ccaagcactc gctgatcgac
     1681 atgaccgtca aggccaaggg cgacctgcac gtcgatttcc accacaccgc cgaggatacc
     1741 ggcatcgcgc tcggcgaggc ggtgaaaaag gcgctgggcg acaagaaggg catccgccgc
     1801 tacgccagcg ccgacctggt gatggacggg acgctcaccc gcgccgccct cgacgtcagc
     1861 ggccggccgt tcctggtgtg gaaggtgaat ttcaccgccg gcaaggtcgg cgagatggac
     1921 accgaactgt tccgcgagtg gttccaggcg tttgccatga acgccgggat cacgctgcac
     1981 gtcgaaaatc tctacggcga caacaaccac cacatcgccg aatcggcgtt caaggcattg
     2041 gcgcgggcgc tgcgggacgc ggtggaaatc gatccgcggg ccaaggatgc gattccgagc
     2101 accaaagggt cgctgtaggc cgcacctagc cgcgccggag ccttcggcca ggcctcgggg
     2161 ctgggcggac ccggcccccg gcccttactg ccagccgtgc gtggcgccgg ccagcaggcc
     2221 cgtcgccgcc cagatcaccg caaacgccag caatgccagc gccagccagc cgatgaacac
     2281 gccctggctg ggggcctcgc gcggcgccgc gtcggcatgc gggtcggaat tgtcggccat
     2341 cgtctcgtct ccatcgcggg catcgggctc ggccgttcgc ttccctgcgc ggccgatttg
     2401 ttctaagcgg gtgccatgac cgtctactct atctttgaaa aaccgcaagg gaaggcggca
     2461 aagaaccgcg tgccgcaggt gattccaccg gtcgcggtgg ccgatcgctt ttcttttctc
     2521 gcggcgattt tcccgccgtt ctacgccctg ttcaacggcc tctggctggt gctggtgttc
     2581 tggatcgtgc tggcgctggg cctcgcctat atcagccggg tgatcggcac cgaggcggcg
     2641 gcgtggctct acgtgctggt cgccgtgttc atcggcttcg aggcgccggc cttccgccgc
     2701 gacgcgctgc tggcgcgggg ctatctgtgg cgcggcgacg ccgtggccgc cgccgccgat
     2761 ctcgccgagc gcgatttcct ggcccgccca aaatgaccgg cggcggcgtc gccatcatcg
     2821 attacgggtc gggcaatctg cgctcggccg ccaaggcctt cgagcgctcg gtgcgggcgc
     2881 tgcgggccga caccccggtc atcgtcaccg gcgatccgga aatcgtccgc cgggccgacc
     2941 gcatcgtgct gcccggcgtc ggcgccttcg aggactgcat gaacggcctc ggcgcggtgc
     3001 gcggcatgcg cgaggcgctc gaggagcggg tgatcaaggg cggcgtgccg ttcctcggca
     3061 tctgcgtcgg catgcagctg atggcgaccg aggggcacga gaagggcgtc tatgccggcc
     3121 tcaactggat tctcgggccg gtggtgcggc tcgacccgcg cggcggcctc aaggtgccgc
     3181 acatgggctg gaacacgctg aaattcaccc gcccgcaccc gctgctcgcc aacatcccgg
     3241 acggcgaggc gggcctgcac gcctatttcg tccactccta ccacctcgcc ccgaccgacg
     3301 accgcgagct gttcgccacc accgaatacg gccagccggt caccgcctgc gtcggccgcg
     3361 acaacctgtt cggaacccag ttccacccgg aaaagagcca gaccctcggg ctgacgctga
     3421 tcgagaattt cctggagtgg acgccgtgat cctgtt
//
LOCUS       DATAZA010000175         5108 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1759743, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000175 DATAZA010000000
VERSION     DATAZA010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5108
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1759743"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..551)
                     /locus_tag="VHZ56_04450"
     CDS             complement(114..551)
                     /locus_tag="VHZ56_04450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall hydrolase"
                     /protein_id="HEX4297251.1"
                     /translation="MLPLLAATTALPMLAGCAVMPFGAFMSPTDCMTRVMYFESIRSS
                     ADGMLAVGTVVMNRVADPKFPHSVCAVVGQPGQFAPGVMWLPMQRGSGFALAQDMATR
                     VLRGERHPAVGGAEYFHTAGWSFPYDNMHYVLVAGGNAFYWKS"
     gene            complement(618..932)
                     /locus_tag="VHZ56_04455"
     CDS             complement(618..932)
                     /locus_tag="VHZ56_04455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297252.1"
                     /translation="MAWTDLIDEREARRLAQQLRHNTRQTGALAQDHLQHLAHDAGAV
                     AGQAAREVARYGRQEGGVLAQAAAREAARAGRAFRADPVPMLVGAVGLALLASLVLGR
                     RR"
     gene            complement(976..1461)
                     /locus_tag="VHZ56_04460"
     CDS             complement(976..1461)
                     /locus_tag="VHZ56_04460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297253.1"
                     /translation="MRLYLFAAASLPMLLLAGCGGGAPAPASSSSVAAAPAQTTEAAA
                     APAPVLAAPSGPQAADDKLQPLYGTWGLDPANCGDQVLKISKTRFEGPGSSCDITGFS
                     DNGNGSYTATMSCSAGGQSASEQVQMRPIFAPTGEGVDLVYLNRQNLASEVLRCDVPS
                     N"
     gene            complement(1613..1819)
                     /locus_tag="VHZ56_04465"
     CDS             complement(1613..1819)
                     /locus_tag="VHZ56_04465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010439113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX4297254.1"
                     /translation="MTEGVVKFFNTTKGFGFIEPTTGGKDAFVHISAVERSGMTTLVE
                     GQKVSYEVETGRDGKQSATKLKAL"
     gene            complement(2000..2350)
                     /locus_tag="VHZ56_04470"
     CDS             complement(2000..2350)
                     /locus_tag="VHZ56_04470"
                     /inference="COORDINATES: protein motif:HMM:NF019452.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aa3-type cytochrome c oxidase subunit IV"
                     /protein_id="HEX4297255.1"
                     /translation="MAATTPISPDPLVPIEEESSPDMDFAAHVRTFNAVVSTAKWFVA
                     HLLLLLIALYFLVIAGQAVTGIFFLCCALALLVFATLRRSSIRADLAKGLAAGPTAPA
                     RDAIDRTPGLGDRT"
     gene            complement(2420..2947)
                     /locus_tag="VHZ56_04475"
     CDS             complement(2420..2947)
                     /locus_tag="VHZ56_04475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEX4297256.1"
                     /translation="MFVFLDFEASSLARQSYPIEVGWVDESGAGEGHLIRPAPGWIDW
                     DERAAAVHGISRDQLLREGEPHDAVCERLLAVFARSEVLAGAPSWDGHWLSMLLRAAG
                     HPRHLVRLRDSEEAFIAAARARLGPGAAGTSIAALVEEIRRSVEAEPASHRALADARR
                     EWSIWRRIALPPPQD"
     gene            complement(2964..3368)
                     /locus_tag="VHZ56_04480"
     CDS             complement(2964..3368)
                     /locus_tag="VHZ56_04480"
                     /inference="COORDINATES: protein motif:HMM:NF018663.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX4297257.1"
                     /translation="MTSRLNPYLSFKDNAAAAMDFYKSVFGGTLTVMTFGQVGEQGAE
                     KDRIMHSQLDTANGFTLMGSDTPARMGEPRPNGSVSLSGEDDSELRGYWDKLCQGGTV
                     TMPLEKAPWGDSFGMLADKFGTSWLVNIAGKR"
     gene            complement(3429..4658)
                     /locus_tag="VHZ56_04485"
     CDS             complement(3429..4658)
                     /locus_tag="VHZ56_04485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006206489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4297258.1"
                     /translation="MTKNYGWVVVAAGALITCVAMGALFALPVYLQPMADDTGWSRAG
                     IAGAMTIGFVVMGVAGFGWGALSDRIGARQVVLGAAVLLGTGLVIASRAPNLLVFQLA
                     YGGLVGGSGGAFFAPLISATLGWFDKRRSLAVSLVSVGGGIAPMIVTPFSSELISTYG
                     WRSAMFYIAIGATVLLIPTALLIRRAPLALEPTAAATPQAAGPKASRSPALAALRSPQ
                     FIVLAVTFFLCCGSHSGPIFHTVSYAEICGASALAAASIYSVEGVAGLFGRLLFATAA
                     DRFGVRPVIVAGLAIQAVGIYLYIYVSALPHFYMLAVVLGMVYGGVMPLYSVLAREYF
                     GQRVLGTVLGAATMTSSLGMAFGPVGGGWLYDTFGTYHWLYIASAGVGVAAALMALAF
                     PPPPRRAEDGPVVPQPA"
     gene            5011..>5108
                     /locus_tag="VHZ56_04490"
     CDS             5011..>5108
                     /locus_tag="VHZ56_04490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HEX4297259.1"
                     /translation="MSGLQIYVDADACPVKDEVLRVAARHGVAVTLV"
BASE COUNT          843 a         1716 c         1856 g          693 t
ORIGIN      
        1 tgcgcccatt tcgacttggt ctgggtgagc ttgctgtcgt caggggtctc ggccatgggt
       61 gcctccgcgt gccggcccga gcttgggcac gtcggggccg aagtcaagcc ggctcaggac
      121 ttccagtaga aggcgttgcc gccggcgacc agcacgtagt gcatgttgtc gtaggggaag
      181 ctccagccgg cggtgtggaa atactcggcg ccgccgaccg ccggatgccg ctcgccgcgc
      241 agcacgcggg tcgccatgtc ctgcgccagg gcgaagccgc tgccccgctg catcggcagc
      301 cacatgacgc ccggcgcgaa ttgcccgggc tggccgacca ctgcgcatac cgagtgcggg
      361 aatttcggat cggcgacgcg gttcatcacc accgtcccga ccgcgagcat cccatcggca
      421 ctggagcgga tggattcgaa atacatcacc cgcgtcatgc agtcggtcgg cgacatgaag
      481 gcgccgaacg gcatcaccgc gcagccggcc agcatcggca acgccgtcgt cgcggcgaga
      541 aggggcagca cacgcaacac atctgctccg tagacgcgag gcgtccacag tgcggcggtg
      601 cggttaagat cgggttgtca gcggcgccgg ccgaggacga ggctggccag cagcgccagc
      661 ccgaccgcgc cgaccagcat cggcacgggg tcggcccgga aggcgcggcc ggctcgggcc
      721 gcctcgcgcg ccgccgcctg ggcgagaacg ccgccctcct gtcgaccgta gcgcgcgacc
      781 tcgcgggctg cctggccggc gacggctccg gcatcgtgcg ccaggtgctg caggtgatcc
      841 tgcgccagtg cgccggtctg gcgggtgttg tggcgaagct gctgcgccag ccggcgggct
      901 tcgcgctcat cgatcagatc ggtccaggcc ataggtacct ccgcgcccga aacgcagccg
      961 gaggcgtgcc ggttcctagt tcgatggcac gtcgcagcgc agcacctcgg acgcgaggtt
     1021 ctggcggttg aggtagacca ggtcgacgcc ttctccggtc ggcgcgaaga tcggccgcat
     1081 ctgcacctgc tcggaggcgc tctggccgcc ggcgctgcag ctcatggtcg cggtgtagct
     1141 gccattgccg ttgtcgctga acccagtgat gtcgcagctg ctgcccggac cctcgaaccg
     1201 ggtcttcgag atcttcagga cctggtcgcc gcaattggcc ggatcgaggc cccacgtgcc
     1261 gtagagcggc tgcagcttgt cgtcggcggc ctgcgggccg gacggcgcgg cgagcaccgg
     1321 ggccggcgcg gcagcggctt ccgtggtctg cgccggtgcg gcggcgacgg acgagctgct
     1381 cgccggagcc ggcgcaccgc cgccgcatcc ggcgagaagg agcatcggca ggctggcggc
     1441 ggcgaaaaga tagaggcgca tggcgggccc tcgggtgacg ctggccgggc aatgagtcgg
     1501 gccgggcgtc cgttccatgc ccagactacc cgatcgttgc cccgacgggg atagggccaa
     1561 caaaaaaggc cccttgcggg gccttttcgc ggcagaacgc cgatttatcg gctcagaggg
     1621 ccttgagctt ggtcgcggac tgcttgccgt cgcgaccggt ctcgacctcg tagctgacct
     1681 tctggccctc gacgagggtg gtcatgccgg agcgctcgac cgcggagatg tggacgaacg
     1741 cgtccttccc gcccgtggtc ggctcgatga atccaaagcc cttggtggtg ttgaagaatt
     1801 tgacgacgcc ttcggtcatg gggtgtcctc gaaaggcgaa ttccgggggc gacatgccgt
     1861 ccggcgacgt tcgacagtcc tcaggagatc acccgaccgg cgagccggcc gtcagatagc
     1921 gcgagacggt agcgaagcgt atgcacaagg aaatggcctg ttttcgccac aagttcaagt
     1981 gggattggcc gcaaccccct cacgtgcggt cgccgagacc gggcgtccga tcgatggcgt
     2041 cgcgcgccgg ggcggtgggt ccggcggcga ggcccttggc gagatcggcg cggatgctcg
     2101 agcgccgcag cgtggcgaac accagcagtg ccagcgcgca gcagaggaag aagatgccgg
     2161 tgaccgcctg gccagcgatg acgaggaaat acagcgcgat cagcagcagc agcaggtgcg
     2221 cgacgaacca cttcgccgtg ctcaccaccg cgttgaaggt gcggacgtgg gcggcgaagt
     2281 ccatgtcggg cgagctctcc tcctcgatcg gaacgagcgg gtcgggcgaa atgggtgtcg
     2341 tggcggccat ggcggaactc cttgccgaag ggaaaccgcc gcgtcgccac acggttcccc
     2401 ggcaaagcgg ggcaggcggc tagtcctgcg gcggcggcag ggcgatgcgg cgccagatcg
     2461 accattcgcg ccgcgcgtcg gcaagcgccc gatggctggc aggctcggcc tcgaccgatc
     2521 gccggatctc ctcgaccagc gcggcgatcg acgtccccgc cgctcccgga ccgaggcggg
     2581 cgcgggcggc ggcgatgaac gcttcctcgc tgtcgcgaag ccggaccaga tgccgcggat
     2641 ggccggcggc ccgcagcagc atgctgagcc agtgcccgtc ccacgacggc gcgccggcca
     2701 gcacctcgct gcgggcaaag accgcgagca accgctcgca caccgcatca tgcggctcgc
     2761 cctcgcgcag cagctggtcg cggctgatgc cgtgcaccgc cgcggcgcgc tcgtcccagt
     2821 cgatccagcc gggcgccggc cggatcagat ggccctcgcc agccccgctt tcgtcgaccc
     2881 agccgacctc gatggggtag ctctgacggg cgagcgacga cgcctcgaaa tcgaggaaga
     2941 cgaacaccgg gccggcagcg gcgctagcgc ttgccggcga tgttgaccag ccacgaggtg
     3001 ccgaacttgt cggcaagcat gccaaagctg tcgccccacg gcgccttttc gagcggcatc
     3061 gtcacggtgc cgccctggca gagcttgtcc cagtagccgc gcaactcgga atcgtcttcg
     3121 cccgacagcg agaccgagcc gttcgggcgg ggttcgccca tccgggccgg cgtgtccgag
     3181 cccatcagcg tgaagccgtt cgcggtatcc agctgcgaat gcatgatccg gtccttctcg
     3241 gcaccctgct cgcccacctg gccgaaggtc atgacggtga gggtgccgcc gaacaccgat
     3301 ttgtagaaat ccatcgccgc ggcggcgttg tccttgaagc tcagataggg gttgagacgg
     3361 ctggtcatgg cgacctcctc gttcgtgcag cccggacggt agcaaccggg tgcggcgaag
     3421 gctaggcgtc aggccggttg cggcacgaca ggcccgtcct cggcgcgccg cggcggcggc
     3481 gggaacgcca gcgccatgag cgcggcggcg acgccgacgc cggcggaggc gatgtagagc
     3541 cagtgatagg tgccgaaggt gtcgtagagc cagccgccgc cgaccgggcc gaaggccatg
     3601 ccgaggctcg acgtcatggt ggcggcgccg agcacggtcc cgagcacccg ctgcccgaaa
     3661 tattcgcggg ccagcaccga gtagagcggc atgacaccgc catagaccat gcccagcacc
     3721 acggcgagca tgtagaaatg cggcagcgcc gacacgtaga tgtagaggta gatgccgacc
     3781 gcctggatgg cgaggccggc gacgatcacc gggcggacgc cgaaacggtc ggcggcggtc
     3841 gcgaacagca gccggccgaa cagcccggcg acgccctcga cgctgtagat gctggcggcg
     3901 gccagcgccg acgcgccgca gatctcggca tagctgacgg tatggaagat cggccccgaa
     3961 tgcgatccgc agcagaggaa gaacgtcacc gcgaggacga tgaactgcgg cgagcgcagc
     4021 gccgccagcg ccggcgagcg ggacgccttc gggccggcgg cctgcggcgt ggcggccgcc
     4081 gtgggctcta gggccagcgg cgcgcggcgg atgagcagcg ccgtcgggat cagcagcacg
     4141 gtggcgccga tggcgatgta gaacatcgcc gaccgccagc cataggtgga gatcagctcg
     4201 ctcgagaacg gcgtgacgat catcggcgcg atgccgccgc cgaccgagac cagcgacacg
     4261 gcgagcgacc ggcgcttgtc gaaccagccc agcgtggccg agatcagcgg cgcgaagaat
     4321 gccccgccgg agccgccgac cagcccgcca taggcgagct ggaacaccag cagattgggg
     4381 gcgcggctgg cgatcacgag gccggtgccg agcagcaccg cggcgccgag gacgacctgc
     4441 cgggcgccga tccggtcgga cagcgcgccc cagccgaacc cggcgacgcc catcaccacg
     4501 aagccgatgg tcatggcgcc ggcgatgccg gcccgcgacc agccggtgtc gtcggccatc
     4561 ggctgcaggt agaccggcag cgcgaacagc gcgcccatcg ccacgcaggt gatcagcgcc
     4621 cccgccgcga cgaccaccca gccatagttc ttcgtcatct tcagctcccc ctccgcacac
     4681 ctgccatcta gacgaagcag cagcgcggga ttcgacagcg gcacacggat atttccgctc
     4741 cggcctgtct gccattggtt aagccgaagc tttagtgttg taaagggcgc gagagccgac
     4801 gtcggcaccc ggcggaagca ggagaaggag agagagcggg gtggggggcg tctccggtga
     4861 tgtcatcgag gcatcgtaac cggagcggag gcgacgggga taagtcgggg ggatcgactg
     4921 gacggcaggg ttgcgctccg gccaacgcgg cgccgggcga tgcgttgcgc ggcaggtgac
     4981 ccggcgccgg cgggcggcta gaggcgggcg atgagcggcc tccagatcta tgtcgatgcc
     5041 gacgcctgcc cggtgaagga cgaggtgctg cgcgtcgccg cccggcacgg agtggcggtg
     5101 acgctggt
//
LOCUS       DATAZA010000176         4643 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_251028, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000176 DATAZA010000000
VERSION     DATAZA010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4643
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_251028"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..412
                     /locus_tag="VHZ56_04495"
     CDS             <1..412
                     /locus_tag="VHZ56_04495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEX4297260.1"
                     /translation="TPYELEAGGSAVTLRFVGGLLGQFAAWTRTAVDILAEVRQAIAG
                     DEEMLRRLLRLDAQLTDANAALFDVANGFAGSIAGINEILAQQGLLGGRWCLDPHEDL
                     SPGQAGEIARVRAAYPHLTDDAFVAEHRDHWLRG"
     gene            409..1635
                     /locus_tag="VHZ56_04500"
     CDS             409..1635
                     /locus_tag="VHZ56_04500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297261.1"
                     /translation="MIGAITPAEWSEETDPATGRIVRRLTDGRSNSYALYYFTTSVTP
                     DGRYLVFHSERDGTVQLYRLDLRTGEIGRLTDGRTRDAGWAIWCEWHLDGIYNHLSAL
                     RPRSGEVWYFEADEIRATDVASFANRMVTRLPAGRMPVGQAAFSPDGRWFGYIHMDEA
                     KFRALLAQREAETQAGRFDWDRDHHAVFRNALGATLALVDTTTGAQQTVIETDFHFHH
                     VLFVDNDTLLLNHPKGCAGMWLVRRDGTGVRHIRPAEAAGAHGAAVNHQVVTARGIAY
                     EAVGPGQNDSRETWLGLYDPASDSWREARIPVTGYAHVGFDPGGRLEFVENAGTRHEL
                     LLVQPASAPGGPLGLEVLRTLSSPTHDDQRHHAHPFLSPDRTTLYFTDWSGEGFAQIC
                     CIDVRDLVAAADAATP"
     gene            complement(1625..2476)
                     /locus_tag="VHZ56_04505"
     CDS             complement(1625..2476)
                     /locus_tag="VHZ56_04505"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4297262.1"
                     /translation="MSVRIGLAGIDSSHAEDFLRHFNAEGRHPGMRIAALWGDDPQRV
                     AELLARDGDIVAAPSLEALVRSVDAVIVGDRHGDLHLGHALPAIAAGLPVFVDKPLSN
                     GLVDAGAMVTAAEAAGVPLCSGSALRWQAETARLKARIAGLDGSFTLATYGTWYPQNE
                     YGGAIFYAIHSIELVQELLGIDSRKLAVAGGDVPVVTYQCGDAKVTIELRPLDASGSS
                     AFGVRVRARAAELEQPIVLGDDYMAPVAAKIAAMLRTGRSPLSRAELLAPVALMEEIE
                     ARLTIRA"
     gene            2607..3947
                     /locus_tag="VHZ56_04510"
     CDS             2607..3947
                     /locus_tag="VHZ56_04510"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX4297263.1"
                     /translation="MRPLFRNLLLLSTTALAASALGTVVPAVAADKTVVTFLTIGYPD
                     KDTTDAATGAIAPGIDKLTAAFDAANPTIDLQITNIPWGEGATGYTPKTEAMVEANQS
                     CLYEMPGAPSFAKRGLLANLDDFIAKDTSFNNVWGKQLDTDKVWGPDAQHLYYIPDNT
                     GERVFNWDATIFADYGVEPLSKNPTLDEIATKAKALTGTDPKTGKQTYGYWYQGKYTV
                     WQFLSIAHAMGANWGSIDATGKMTVNWNTPEYLKALQWLVDMAKYAPAGALASDAMPD
                     GFLSDDNVVAIIPEGEQGYFIQPLIANPDLQKRFRSSFNLRGPDGVGGVSTITPVAMA
                     ASCTNKDAAWTALKWLAGAPEAEAYYFQASGRLPSASTGAQAVPDIAKFPDADVVLTQ
                     PQFAEAPYPWAADQPRFSLQNAIEAAIAGTATPADALKQAQTETDAWLAKQAGQ"
     gene            3952..>4643
                     /locus_tag="VHZ56_04515"
     CDS             3952..>4643
                     /locus_tag="VHZ56_04515"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX4297264.1"
                     /translation="MKPGSASSSPDSGFSSRLRTAFRGTLVWYGFVLPPLFLILVFIG
                     YPTVISFEQSTFTEVPGGGHRFAGTYHFERLLTDNVFWGALGNTVLLGVAFLVLVIPI
                     ATVFASMLNRVRRGATPLKVIYFLPQLTSSVAIAIMFNYIFQPDWGLLNGALRSIGIT
                     QLPLWLADPRYSLTGSRAAVTLLAIWAGLGYFIIVILAGLQSIPTDLYDAAAIDGASP
                     LQSWWHITLPSLR"
BASE COUNT          744 a         1719 c         1449 g          731 t
ORIGIN      
        1 gaccccttac gagctcgagg ccggcggcag cgccgtcacc ctgcgcttcg tcggcggcct
       61 gctcggccag tttgccgcct ggacccggac ggcggtcgac attcttgcgg aagtccggca
      121 ggcgattgcc ggcgacgagg agatgctgcg ccggctgctg cgcctcgatg cccagctcac
      181 cgacgccaac gctgccctgt tcgacgtcgc caacggcttt gccggcagca tcgccggcat
      241 caacgaaatc ctcgcgcagc agggattgct cggcggccgc tggtgcctcg atccgcacga
      301 ggatctgtcg ccggggcagg ccggggagat cgcccgcgtc cgcgccgcct atccgcatct
      361 caccgacgac gccttcgtcg ccgagcaccg cgaccactgg ctgcgcggat gatcggcgcg
      421 atcactccgg cggagtggtc ggaggaaacc gacccggcga ccggccgcat cgtccgccgc
      481 ctcaccgatg gccggtcgaa ctcctacgcg ctttattatt tcaccacatc ggtgacgccc
      541 gacggccgct acctcgtgtt ccattccgag cgcgacggca cggtgcagct ctaccggctc
      601 gacctgcgga ccggcgagat cggccggctg accgacggac gcacccgcga cgccggctgg
      661 gccatctggt gcgaatggca cctcgacggc atctacaacc atttgagcgc actccgtccg
      721 cgcagcggcg aggtgtggta tttcgaggcc gacgaaatcc gcgccaccga cgttgcgagc
      781 ttcgccaacc ggatggttac ccgcctgccg gccggccgca tgccggtggg acaggcggca
      841 ttttcgcccg atggacgctg gttcggctat atccacatgg acgaggcgaa gttccgggcg
      901 ctcctcgcgc agcgcgaagc cgagacgcaa gccggccgct tcgactggga ccgcgaccat
      961 cacgctgtct tccgcaacgc cctcggggcg acgctggcgc tggtcgatac gacgaccggc
     1021 gcgcagcaga cggtcatcga gaccgacttc cacttccacc atgtgctgtt cgtcgacaac
     1081 gacaccctcc tgctcaacca tcccaagggc tgcgcgggga tgtggctggt gcggcgcgac
     1141 ggcacgggcg tcaggcacat ccggcccgcc gaggcggctg gcgcccacgg cgcggcggtc
     1201 aaccaccagg tggtgacggc gcggggcatc gcctatgagg cggtggggcc gggccagaac
     1261 gacagtcgcg agacctggct cggcctctac gatccggcat ccgacagctg gcgcgaagcc
     1321 cgcattcccg tcaccggcta cgcccatgtc ggcttcgatc ccggcggccg gctggagttt
     1381 gtcgagaacg ccggcacgcg gcacgaactg ctgctggtac agccggcgag cgcgcccggc
     1441 gggccgctcg ggctcgaggt cctgcgcacg ctgtcgagcc cgacccacga cgaccagcgc
     1501 catcacgcgc acccgttcct ctcgccggac cgcaccacgc tctatttcac cgactggtcg
     1561 ggtgagggct tcgcgcagat ctgctgcatc gatgtgcgcg acctcgtcgc ggcagcggac
     1621 gccgctacgc cctgatggtc agccttgcct cgatctcttc catcagcgcc accggcgcca
     1681 gcagctcggc gcgcgacagc gggcttcgcc cggtccgcag catcgcggcg atttttgccg
     1741 cgaccggcgc catgtagtcg tcgccgagga cgatcggctg ctccagctcg gccgccctgg
     1801 cgcggacccg caccccgaac gccgacgagc ccgacgcatc gagcggccgc agctcgatcg
     1861 tcaccttcgc gtcgccgcac tgataggtga ccaccggcac gtcgccgccg gcgacggcga
     1921 gtttccggct atcgatgccg agcaattcct gcaccagctc gatgctgtgg atggcgtaga
     1981 agatcgcccc gccatactcg ttctgcggat accaggtgcc gtaggtcgcg agcgtgaaac
     2041 tgccgtcgag gccggcgatg cgcgccttga gtcgcgccgt ctccgcctgc cagcgcagcg
     2101 cgctgcccga gcagagcggc acgcccgcgg cttcggcggc ggtgaccatc gccccggcgt
     2161 cgacgaggcc gttgctcagc ggcttgtcga cgaacaccgg caatcctgcg gcgatcgccg
     2221 gcagcgcgtg gccgagatgc aggtcgccgt gccggtcgcc gacgatgacc gcgtccaccg
     2281 accggaccag ggcctcgagg ctcggtgccg cgacgatgtc gccatctcgc gccagcagtt
     2341 cggcgacacg ctgtgggtcg tcgccccaca gcgccgcgat gcgcatgccg gggtgccgtc
     2401 cctcggcatt gaagtggcgc aggaagtcct cggcgtggct gctgtcgata ccggcgaggc
     2461 cgatgcggac ggacatgggt tcgagcctcg gaagtgactt gacgctggca gggggcactg
     2521 acagattagt cataagtcat catatgttct tagacaacgc ctagcctgcc tcggcacacc
     2581 gtctcccacc acaggaaaga actccgatga gaccgctttt ccgcaatctg cttctgctct
     2641 caaccaccgc gttggctgcg tcggccctgg gcacggttgt gccggcggtc gccgcggaca
     2701 agacggtcgt gaccttcctc accatcggct atcccgacaa ggacaccacc gacgccgcca
     2761 ccggcgccat tgcccccggc atcgacaagc tgacggcggc gttcgacgct gccaacccga
     2821 cgatcgacct gcagatcacc aacatcccgt ggggcgaggg cgccaccggc tacacgccca
     2881 agaccgaggc gatggtagag gccaaccagt cgtgcctcta cgagatgccc ggcgccccga
     2941 gcttcgccaa gcgcggcctg ctcgccaacc tcgacgactt catcgccaag gacaccagct
     3001 tcaacaatgt ctggggcaag cagctcgaca ccgacaaggt gtggggaccc gatgcccagc
     3061 acctctatta cattcccgac aacaccggcg agcgcgtctt caactgggac gcgacgatct
     3121 tcgccgacta cggcgtcgag ccgctgagca agaacccgac cctcgacgag atcgctacca
     3181 aggccaaggc gctgaccggc accgatccca agaccggcaa gcagacctat ggctactggt
     3241 accagggcaa gtatactgtc tggcagttcc tctccatcgc ccacgcgatg ggcgccaact
     3301 ggggcagcat cgatgccacg ggcaagatga cggtcaactg gaacacgccg gaatatctga
     3361 aggcgttgca gtggctggtc gacatggcca aatatgcacc cgccggcgcg ctggcgagcg
     3421 acgccatgcc cgacggcttc ctcagcgacg ataacgtcgt ggccatcatc cccgagggcg
     3481 agcagggcta tttcatccag ccgctgatcg ccaatcccga cctgcagaag cgcttccgct
     3541 cctcgttcaa cctgcgcgga cccgacggcg tcggcggtgt cagcaccatc accccggtcg
     3601 ccatggccgc cagctgcacc aacaaggacg cggcgtggac cgccctcaaa tggctcgccg
     3661 gcgcgccgga agccgaggcc tattacttcc aggcgtcggg ccgcctgccc agcgcctcga
     3721 ccggtgccca ggccgtaccc gacatcgcca agttccccga tgccgacgtc gtgctgacgc
     3781 agccgcagtt cgccgaggcg ccctatccgt gggcggccga ccagccgcgc ttctcgctgc
     3841 agaacgccat cgaggcggcc atcgccggca ccgccactcc ggccgacgcg ctgaagcagg
     3901 cgcagaccga aaccgacgcc tggctcgcca agcaggcagg tcagtaagcg catgaagccg
     3961 gggtcggcct cctcctcccc tgactccggc ttctcctccc gcctgcggac ggcctttcgc
     4021 ggcaccctgg tctggtacgg cttcgtgctg ccgccgctgt tcctgatcct cgtcttcatc
     4081 ggctacccga cagtcatctc gttcgagcag agcaccttca ccgaggtgcc gggcggcggc
     4141 caccgcttcg ccggcaccta ccacttcgag cggctgctga ccgacaatgt gttctggggc
     4201 gcgctcggca acaccgtcct gctcggcgtc gcgttcctgg tgctggtcat tccgatcgcc
     4261 accgtctttg cctcgatgct caaccgcgtc cgccgcggcg cgacgccgct gaaggtgatc
     4321 tacttcctgc cgcagctgac ctcgtcggtc gccatcgcca tcatgttcaa ctacatcttc
     4381 cagccggact ggggactgct caacggcgcg ttgcgctcga tcggcatcac ccagctgccg
     4441 ctctggctcg ccgatccgcg ctactcgctc accggctccc gcgccgccgt gacgctgctc
     4501 gccatctggg ccgggctcgg ctacttcatc atcgtcatcc tcgccggcct gcagtcgatc
     4561 cccaccgacc tctacgacgc cgccgccatc gacggcgcga gtccgctcca atcgtggtgg
     4621 cacatcacgc tgccgagcct gcg
//
LOCUS       DATAZA010000177         2583 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1643403, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000177 DATAZA010000000
VERSION     DATAZA010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2583
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1643403"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            617..1642
                     /locus_tag="VHZ56_04520"
     CDS             617..1642
                     /locus_tag="VHZ56_04520"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX4297265.1"
                     /translation="MIELGDFVTAAEGSDPPPLAEIIFQILRRNIEEGRLPDGLVLSE
                     ADVSRTFDVSRTPARTALGRLRDENLIAAHDGRGFLVIRGGPRQPLRQRLAETELQVA
                     ASEQDALNSSGAVDRIYPSLERTASSVTAFGRFMVNQTALADFYGTSRTVAQIALTRL
                     ERSGLVVRDRHARWYIERLTVQKAIDHYTIRELLEPVALELAFPSMSRDKIYGSWRRL
                     GQLLEHSSAVTPKDLDEVERDLHLDLVHLCPNAQMVKVINESQLPLIGTHYTAERYGG
                     SPEMTRSFLQHSNVLTLLLEGSPDRAAEALRHHLSSAVEVTISRLRHLPELHRDLYPP
                     YLTPVDE"
     gene            1652..>2583
                     /locus_tag="VHZ56_04525"
     CDS             1652..>2583
                     /locus_tag="VHZ56_04525"
                     /inference="COORDINATES: protein motif:HMM:NF014653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HEX4297266.1"
                     /translation="MATTLPVRDATALASAALRHSGLSGVLADHVAEVLVAADMMGHR
                     THGLALLPTYLEELARGGMTISGDYRIERDVGAALFIDACRLPGAYVLRDILRKMVDR
                     SAAHPVVTASIGNCFHIGALQTYLEIATGAGLLCLLTATDPAIASVAPFGGLDPVITS
                     NPIAFGIPTSGDPILIDFCTSVISNAVVRTHLAAGQQLPGDWLIDGHGQPTRDPAAVT
                     ASPPGTILPIGGTDFGYKGFALGLMVEAMALALSGYGRTGDHRLFGEGVFVQVINPDY
                     FSGTDFFKREMDGLAARSTGSRVPAGADRVRLPG"
BASE COUNT          437 a          849 c          829 g          468 t
ORIGIN      
        1 atcggcagcc aggatcacaa tgacaaagct cgtcagccgc aggttttggc tgggggcgca
       61 gacgatgttg aagccgctcg aatccatcga aaggtccggc gcattccagg ccacttcgtg
      121 gatttcgacg cgatcgatca aagtcatttc agcagtcctg gggtcacggg cgaccggcac
      181 tagagcgtgg tttgagatgg cgtcgtccgg gggccgttgc gcgaggtgcg agacgtccgg
      241 ttcggagctc gatggaaagc cgtcggtgcg ggaagaccgt cgactccgac ctcgccctcg
      301 ggtcgccgcg ccatggctgc cgccaggtcg cacatggcgt tcgcgagcag gttcaaccgg
      361 tgcagggagc gagatgcctc cgggccgaac gatgccccga aacgatcctc gcccggaaca
      421 aggtggccag gtgtctgcgc cggctttgct ttcattctgg cctccaatac gcaacgtcgc
      481 ccgccgcgcg ttttggtatt tcgcatccac aatacgatat ggtcaagtgg gattgtgaat
      541 atggtgcggt cgtttcgcat tgcggaaagg gctttagagt gcaaaatgcg cgacgaaacc
      601 cttcggatgg gcgccgatga tcgagcttgg agatttcgtc accgcggcgg agggcagcga
      661 tccgccgccg ctcgccgaga tcattttcca gatcctgcgc cgcaacatcg aagaggggcg
      721 gctgcccgac gggctcgtgc tcagcgaagc cgacgtttcg cgaacctttg acgtcagccg
      781 gacgccggcg cgcacggcac tgggtcggtt gcgagatgaa aacctgatcg cggctcacga
      841 tggccgcggc ttcctggtga tccggggagg tccgcgccaa ccgctgcgcc aacggctggc
      901 ggaaaccgag ctgcaggtcg cggcatccga gcaggatgcg ctcaactcat cgggtgccgt
      961 cgaccgcatc tatccgagcc ttgagcgcac ggcgtcttcg gtcaccgcgt tcggacgctt
     1021 catggtcaac cagacggcgc tggccgactt ctacggcacc agcaggaccg tcgcccagat
     1081 cgccctcact cgcctcgagc gcagcggcct cgtggtgcgc gaccggcacg cccgctggta
     1141 catcgagcgg ctgacggtgc agaaagccat cgatcattac acgatccgcg agctgctcga
     1201 gccggtggcc ctcgagttgg cctttccgtc gatgtcccgc gacaagatct atggcagctg
     1261 gcgacgcctc ggacagcttc tcgagcactc cagcgcggtc acgcccaagg atctggacga
     1321 agtcgagcgc gacctgcacc tcgacctcgt ccatctctgc cccaacgccc agatggtcaa
     1381 agtcatcaat gagagccagc tgccgctgat cggcacgcac tacacggcgg agcgctacgg
     1441 cggctcaccg gagatgaccc ggtctttcct gcagcactcc aacgtcctga cgctgctgct
     1501 ggaaggatcg cccgaccggg ccgcggaggc gctgcgccat cacctgagca gtgcggtcga
     1561 ggtgaccata tcgaggctgc gtcacctgcc ggaactgcac cgcgatctct acccgcccta
     1621 tctcaccccc gtcgacgagt aggaccgccg gatggccacg accctgcccg tgcgggacgc
     1681 caccgccctt gcctcggccg cgcttcgcca ctcgggcctg agcggcgtgc tggccgatca
     1741 tgttgccgag gtgctggttg cggccgacat gatgggccac cggacgcatg gccttgccct
     1801 gctgccgacg tacctcgaag aactggcgcg cggcggcatg acgatttcgg gcgactatcg
     1861 gatcgagcgg gatgtcggtg ccgcgttgtt catcgatgcg tgtcgcctgc cgggcgcgta
     1921 cgtgcttcgc gacatccttc ggaagatggt cgaccgctcc gcagcgcatc ccgtcgtcac
     1981 cgcctctatc ggcaactgct ttcatatcgg cgccctgcaa acgtatctcg agattgcgac
     2041 cggcgcaggc ctgctctgcc tgttgaccgc gaccgacccc gccatcgcgt cagtggcgcc
     2101 gtttggcggc ctcgatccgg tgatcacctc gaacccgatt gccttcggca tcccgaccag
     2161 tggcgatccg atattgatcg acttctgcac gtcggtgatc agcaacgccg tggttcggac
     2221 ccatctggca gcgggacagc agttgccagg cgactggctc atcgacggcc acggacagcc
     2281 gacgcgcgat ccggcggcag tcaccgcgtc tccgccgggt acgatcttgc cgattggtgg
     2341 aacagatttt ggctacaagg gcttcgcgct cggcctcatg gtcgaagcga tggccctggc
     2401 cctgtcggga tatgggcgta ccggtgacca tcggctgttc ggcgagggcg tcttcgtcca
     2461 ggtcatcaat cccgattatt tctctggaac ggacttcttc aagcgcgaga tggacgggct
     2521 ggccgcccgc agcacgggca gccgcgttcc ggcgggagcc gacagagtgc gcctcccggg
     2581 aga
//
LOCUS       DATAZA010000178         9516 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_483107, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000178 DATAZA010000000
VERSION     DATAZA010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 9516)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9516)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9516
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_483107"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..216)
                     /locus_tag="VHZ56_04530"
     CDS             complement(<1..216)
                     /locus_tag="VHZ56_04530"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019965715.1"
                     /note="catalyzes a two-step reaction, first charging a
                     serine molecule by linking its carboxyl group to the
                     alpha-phosphate of ATP, followed by transfer of the
                     aminoacyl-adenylate to its tRNA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEX4297267.1"
                     /translation="MLDINWIRANRDAADRALAHRRNVPFSAAELIGFDDARRAVIAR
                     LEEAQATRNSLSKQIGQAKAQKDEARAQ"
     gene            complement(290..1093)
                     /gene="tatC"
                     /locus_tag="VHZ56_04535"
     CDS             complement(290..1093)
                     /gene="tatC"
                     /locus_tag="VHZ56_04535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEX4297268.1"
                     /translation="MVDATLPPGKEEDELKGTEAPLLDHLIELRKRLIYSLAAVVVFF
                     IGCFIIAKPIYDILVLPFRWAGGTSMIYTAPQEFFFTEMNVALFGALFLAFPFIAVQI
                     YSFIAPGLYKRERRAFVPYLVATPVFFLLGALMVYFGVAPMALHFFLGMQQTTPGDIT
                     IQMQTRVSEYLGFIMTLIIAFGICFQLPVILTLLARIEVVNSKMLGKGRKYAVVAILG
                     IAALLSPPDPLSQIGLSLPMYGLYELSILAVKWVEKQRAQKLAAEAVKA"
     gene            complement(1094..1738)
                     /gene="tatB"
                     /locus_tag="VHZ56_04540"
     CDS             complement(1094..1738)
                     /gene="tatB"
                     /locus_tag="VHZ56_04540"
                     /inference="COORDINATES: protein motif:HMM:TIGR01410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HEX4297269.1"
                     /translation="MFGVGWTEMLLVGVVALVVIGPKDLPVVMRQVGKAIGMIRRLGT
                     EFQREINKTTGLDQITDLRRSITEPLKQTAAEITREFNRATESGTVEPSGAIAPKDPA
                     AESVVSAIEEKAGATATPLMMPLPPVAAPVESPAPAEAVAPVKKAPRARKPAPPAIPK
                     ATAEAVTDVAPVAPKKPRVRSATKIAAAAAPSEPAAEAPVVPRTRRRRTPKAEA"
     gene            complement(1769..1981)
                     /gene="tatA"
                     /locus_tag="VHZ56_04545"
     CDS             complement(1769..1981)
                     /gene="tatA"
                     /locus_tag="VHZ56_04545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009463508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HEX4297270.1"
                     /translation="MHGPGLWGIIIVAVVVVVLFGRGKISGVMGEFASGIKAFQKGMK
                     DEDDKPAQMTAQVQSPVVEPEKAKDV"
     gene            complement(2071..2745)
                     /gene="scpB"
                     /locus_tag="VHZ56_04550"
     CDS             complement(2071..2745)
                     /gene="scpB"
                     /locus_tag="VHZ56_04550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEX4297271.1"
                     /translation="MPDTPDAIEASETPDLAERYLRIIEALLFASAEPLAASDLAPHL
                     GEGIDAEPLLVLLQQHYAGRGVNLVRRADKWTFRTAEDLGFLLRREQTETRPLSRAAL
                     ETLAIIAYHQPATRAEVEEVRGVATGKGTLDLLMEAGWVRMRGRRRTPGRPVTYGTTE
                     AFLDHFGLEGLSDLPGLEELKGAGLLSGRLPANMQIPLPFDGPLREDEDPLDPDDIEG
                     QDEPSE"
     gene            complement(2745..3485)
                     /locus_tag="VHZ56_04555"
     CDS             complement(2745..3485)
                     /locus_tag="VHZ56_04555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HEX4297272.1"
                     /translation="MYVDVGGYEGPLDLLLDLARRQKVDLSQISVLALAEQYLGFIET
                     VREKRIEIAADYLVMAAWLAYLKSRLMVPQVASDDEPTGEMMAALLQFRLKRLEAMRL
                     AAQRLMGRPLLGQQVFARGAPEPVTIRRKAHWEASLFDLLKAYATQRERGIPTDYIPF
                     ERNVWSLQEAREILNRLVGDNLDWVPLDSYLAEYLATPEQRATAIASTFASSLELTRL
                     GQIELRQSLAFGPLFLRRRKSDGPQTEN"
     gene            complement(3682..6039)
                     /locus_tag="VHZ56_04560"
     CDS             complement(3682..6039)
                     /locus_tag="VHZ56_04560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297273.1"
                     /translation="MPPARPQQMSDPADKSDDLIAELAKLMATPPAGDSNVRPLQRPQ
                     PPTPSVPAVAAPQPVRIPGMEAPRPAAPAPQPETRGPVTGSIRIPGMDQPAPVSTSAP
                     VGKFDFGKPIAPAPIVQQPISSLSERLAAAAPPAVRLPSDLKPVSENRSFGAGPAVSV
                     APQVPAARSDFNFDFGFSSTPPTPANPPRATPDPIADLINAEPAQVAVAPQPMAPRPA
                     TAVTPMLRTTVTPQPAPARPAMAPLSPAGARPAGNAPIPLKPVSVAPRSPEADRFAIS
                     PGVGLNMRPAAGQPLGQPVTRAPEPMSIDDTDPMSEIESLIGEAVRVELSPGPVRVQA
                     SALVAPTVELEPEQEVEAEIAHREPHPAPVVPPLTTSFAPRRAGLKDDRTASGAEDAI
                     LAAAAATGARVDRVEPAAGDESPYRRLKVKPQRSSFLSGGARQYVGMAVAATLLLAAG
                     LGLYWVLNMGRHAPANGAAAPQLTADTTPIKEKPQAVDKSATSSDLAKSPVLQQMEGV
                     SQAASSEQLISTDQAQGGVADTDNAAAATTDNSEGGLANRKVRTVTVRPDGTIVSGDD
                     AVAGATELPVQRPNVPDVPSSQTTDLLDNATTSTATTDLTPPPATTDAGAAVQTADAQ
                     STVDPTAVAPVPMSFPVRTTSTQAPTNTSVNAVVGAETPNGQIDLLAGNKPAPKTQVA
                     AADALSPQSTTTAAPTNTGGATAAAYVQLSSQPSQAAAQASLKAATAKYGSLFGGNQL
                     MVQQVDLGTKGVRWRVRLPADSLTDAGNICAQIKAQGGDCFATNG"
     gene            complement(6122..7867)
                     /gene="argS"
                     /locus_tag="VHZ56_04565"
     CDS             complement(6122..7867)
                     /gene="argS"
                     /locus_tag="VHZ56_04565"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEX4297274.1"
                     /translation="MDIYADFAARVAVALKQLYPAVPDELLPRAVAEPPRDAGHGDLS
                     SNAAMVVAKPLGKSPREIAAALAEALRADPDVESIEVAGAGFLNFRLKQPVWQRVLKS
                     VAGLGADFGRIDIGHGERVNVEYVSANPTGPMHVGHTRGAVFGDALAALLDYAGYAVT
                     REYYINDAGGQVDVLARSAFLRYREALGETITIPQGLYPGDYLKPVGEKLAEAHGRDL
                     LAMPEAEWLPVVKELTLRMMMDLIRTDLADLGVTHEVFFSERTLHGQGGDIDLTLDWL
                     RQQGLVYQGRLDRPKGAVDDDWEDREQTLFRATLYGDDVDRPLIKSDGSYTYFAADIA
                     YHRNKYLRGFRHMINVLGADHSGYVKRLQAAVKAVSANEADMDVKIMQLVRLLRNGEP
                     VKMSKRSGDLVLLSELVEEVGLDATRFMLLYRRNDAAMDFDFALVKEQTRDNPVFYVQ
                     YAHARTCSVFRTAATELPAPGLAALDLAAAPLERLSSPAEIELIRTVAQWPRTVTAAA
                     LAHEPHRIAFYLYELAAAFHAFWAKGKEDRALRFVNPDDLKLTAARLALVSAVRQVLV
                     NGLTVLGVSAPDELS"
     gene            complement(7948..9081)
                     /locus_tag="VHZ56_04570"
     CDS             complement(7948..9081)
                     /locus_tag="VHZ56_04570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016793 - triphosphoric monoester
                     hydrolase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase"
                     /protein_id="HEX4297275.1"
                     /translation="MSDNAPYASNPAQSHGRLYPVSDSPTRSEFQRDRDRIIHSTAFR
                     RLQYKTQVFLQHEGQHFRTRLTHTLEVSQMARSIARALRLDEDLAEAVALAHDLGHTP
                     FGHAGERVLDDKMAAWGGFDHNFQAIRVVTRLENRYATHDGLNLSWETLEGILKHNGP
                     VAAGIDEMDLMPGTHASLEAQAAAVADDIAYNAHDIDDAIRARLIDLPELVDVPLVGP
                     IVAEVLGRWPDIERSRQTHEVQRRLITRAIEDVIAQAGVAIAAADPHSADDVRQAGRT
                     LIGFSPATAAAERGLKAFLYERVYRSEQVMGPVRRSEIVVADLFDRYFGTADMPGRWG
                     EAGRAAPTDANRARIVADFIAGMTDPYAEAEHARLFDVPKSVR"
     gene            9124..9480
                     /locus_tag="VHZ56_04575"
     CDS             9124..9480
                     /locus_tag="VHZ56_04575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HEX4297276.1"
                     /translation="MTEAALAPNPVLLTDRAAKKIGRVLSRQPAGTVLRIVVAGGGCS
                     GFQYEYKLVQEQPANDDLVLSKDAATVLIDPLSLEFMGGAEIDYVDDLIGQSFQIRNP
                     NAVASCGCGTSFAIAS"
BASE COUNT         1445 a         3319 c         3189 g         1563 t
ORIGIN      
        1 ctgcgcccgc gcctcgtcct tctgcgcctt ggcctggccg atctgcttgc tgaggctgtt
       61 gcgggtcgcc tgcgcttcct cgagccgggc gatcacggcg cggcgcgcgt cgtcgaaccc
      121 gatcagctcg gcggcggaaa agggcacgtt cctgcggtgc gccagcgccc ggtcggccgc
      181 gtcgcggttg gccctgatcc agttgatgtc gagcatggcg ggagtcctcg gaaagcgggc
      241 cccttttgcg aggaacaggc gcggtaatca agcccgctgg tgagccggcc tacgccttga
      301 ccgcttccgc cgcgagtttc tgcgcccgct gcttttccac ccacttcacg gcgaggatcg
      361 ataactcgta gagcccgtac atcggcaggc tgagcccgat ctgcgacaac ggatcgggcg
      421 ggctgagcag cgccgcgatg ccgaggatgg cgacgaccgc gtatttgcgg cccttgccca
      481 gcatcttgga attgaccacc tcgatgcggg ccagcagcgt caggatcacc ggcagctgga
      541 agcaaatgcc gaaggcgatg atcagcgtca tgataaagcc gagatactcg ctgacccgcg
      601 tctgcatctg gatggtgatg tcgccgggcg tggtctgctg catcccgagg aagaagtgca
      661 gcgccatcgg cgcgacgccg aaatatacca tcagcgcgcc aagcaggaaa aacaccggcg
      721 tggcgaccag gtacggcacg aaggcgcgcc gctcgcgctt gtagaggccc ggcgcgatga
      781 acgaatagat ctgcaccgcg atgaacggga acgcgaggaa cagcgccccg aacagcgcca
      841 cgttcatctc cgtgaagaag aactcctgcg gcgcggtgta gatcatgctc gtgccgccgg
      901 cccagcggaa cggcaggacc aggatgtcgt agatcggctt ggcgatgatg aagcagccga
      961 tgaagaacac caccaccgcg gcgagcgagt agatcagccg cttcctgagc tcgatcagat
     1021 ggtcgagcag gggcgcctcg gtgcccttga gctcgtcctc ttccttcccc ggcggcagcg
     1081 tcgcgtcgac catctatgcc tcggccttgg gggtgcggcg ccggcgcgtc cgcggcacaa
     1141 cgggtgcctc ggcggcgggc tccgacggcg ctgcagcggc ggcgatcttg gttgccgaac
     1201 gaacacgcgg ctttttcggc gcaacaggag ccacgtctgt gaccgcctcc gcggtcgcct
     1261 tcggaattgc gggcggggcc ggcttgcggg ccctcggtgc cttcttgacc ggcgcgaccg
     1321 cctcggccgg cgccgggctc tcgaccggcg cggcgacagg cggcagcggc atcatcagcg
     1381 gcgttgccgt cgcaccggcc ttctcctcga tcgcgctgac aaccgactcg gcggccgggt
     1441 ccttgggcgc gatcgcaccg ctcggctcga ccgtcccgct ctcggtggcg cggttgaatt
     1501 cgcgggtgat ttccgccgcc gtctgcttca gcggctcggt gatcgagcgg cgcagatcgg
     1561 tgatctggtc gaggccggtg gtcttgttga tctcgcgctg gaactcggtg ccgaggcgcc
     1621 ggatcatgcc gatcgccttg cccacctgtc gcatcacgac gggcaggtcc ttcgggccga
     1681 tgacgaccag cgccacgacg ccgaccaaca gcatctccgt ccagccgaca ccgaacatga
     1741 ctttatccta gcggtgcgga cgggccgctc agacgtcctt ggccttctcg ggctcgacga
     1801 cgggagactg cacctgcgcc gtcatctgcg ccggcttgtc gtcttcgtcc ttcatgcctt
     1861 tctggaacgc cttgatgccg gaggcgaact cgcccatcac gccggaaatc ttgccgcggc
     1921 cgaatagcac gacgaccacg acggcaacga taatgatgcc ccaaagtcct ggaccgtgca
     1981 tgattcaact ccttttcacg cgggctgtta gacgtgcggt cagaaatagg gtcattcgac
     2041 cctgaacaca aggacgggga tgccgcagcg ttactcgctg ggctcgtcct ggccttcgat
     2101 gtcgtcggga tcgagcggat cctcgtcctc gcgtaggggg ccgtcgaaag gcaatggaat
     2161 ctgcatgtta gccggcagcc gcccggacag caggccggcg cccttgagct cctcgagccc
     2221 cggcaggtcc gacagcccct caagcccgaa atggtcgagg aatgcctcgg tggtgccata
     2281 ggtgaccggt cgtccggggg tgcggcgacg tcctcgcatg cgcacccatc ccgcctccat
     2341 caacagatcg agcgtgccct tcccggtcgc gacgccgcgc acctcttcga cctcggcgcg
     2401 cgtcgccggc tgatggtagg cgatgatcgc cagggtctcg agcgccgccc ggctcaacgg
     2461 gcgcgtctcg gtctgctccc gccgcagcag gaaccccagg tcctcggcgg tgcggaacgt
     2521 ccatttgtcg gcgcggcgga cgaggttcac tccgcgtccg gcatagtgct gctgcagcag
     2581 caccagcagc ggctccgcgt cgatcccctc gcccaggtgc ggcgccaagt cggacgcggc
     2641 gagcggctcg gcggacgcaa acagcagcgc ctcgatgatg cgcagatagc gctccgcgag
     2701 atcgggagtc tcggaagctt cgatggcgtc gggggtgtcg ggcatcaatt ctcggtctgc
     2761 gggccgtcgc tcttgcggcg gcggaggaac aggggcccga aggccagcga ctggcgcagt
     2821 tctatttgcc ccagccgcgt caattcaagg ctggaggcga aagtggaggc aatcgcggtg
     2881 gcccgctgct cgggcgtcgc gagatattcg gcgagatagg agtcgagcgg cacccaatcc
     2941 agattgtcgc ccaccagccg gttgaggatc tcccgcgcct cctgcaacga ccagacattg
     3001 cgctcgaacg ggatgtagtc ggttggaatg ccgcgctcgc gctgcgtggc gtaggccttg
     3061 agcaggtcga acaggctcgc ttcccagtgg gccttgcggc ggatggtcac cggctccgga
     3121 gcgccccggg cgaacacctg ctgcccgagc agtggacgtc ccatcagccg ctgcgcggcg
     3181 agccgcatcg cctcgagccg cttcagccgg aactgcagca gcgccgccat catctcgccg
     3241 gtcggctcgt cgtcgctggc gacctgcggc accatcagcc ggctcttgag ataggccagc
     3301 caggccgcca tcacgagata gtcggcggca atctcgatgc gcttctcgcg caccgtttcg
     3361 atgaacccca gatactgctc ggccagcgcc agcaccgaga tctggctcag gtcgaccttc
     3421 tgccgccgcg ccaggtcgag cagcaggtcg agcggcccct catagccgcc cacgtccaca
     3481 tacatcacct cgtcatcggg cggagacggc ggctgcagcc actcggtgga cggatctggg
     3541 gtcaacgcac tgtgctcgca cgacgcaacg aaagcggcga ttctacacgg agtccgcacc
     3601 cgggcggcgg aaatctccgc gccgcaccgc ccggctaaca gaaaacgtca gcatggccag
     3661 gcgaatccgc ccggacttgc gctagccgtt ggttgcgaag cagtcgccgc cctgcgcctt
     3721 gatctgggcg cagatgttgc cggcatcggt gagcgagtcg gccggcaggc gcacccgcca
     3781 gcgcacgccc ttggtgccga gatcgacctg ctggaccatc agctggttgc cgccaaacag
     3841 gctgccatac ttcgccgtcg ccgccttcag cgaggcctgc gcagcggcct ggctcggctg
     3901 cgagctgagc tgcacgtagg ccgccgccgt cgctccgccc gtgttggtcg gagccgcggt
     3961 cgtggtcgac tgcggcgaca gcgcgtcggc cgccgcgacc tgggtcttgg gcgccggctt
     4021 gttgcccgcg aggaggtcga tctgcccgtt cggcgtctcg gctcccacca ccgcgttcac
     4081 cgaagtattc gtcggcgcct gcgtcgaggt ggtccggacc gggaacgaca tcggcaccgg
     4141 cgcgacggcg gtcggatcga ctgtcgactg cgcgtccgcc gtctgcaccg cggcaccggc
     4201 atcggtcgtg gccggcggcg gggtcaggtc ggtggtcgcc gtcgacgtcg tggcgttgtc
     4261 gagaaggtcg gtcgtctggc tgctcggcac atccggaacg ttcggccgct gcaccggcag
     4321 ttccgtcgca ccggccaccg catcgtcacc cgaaacgatc gtgccgtccg gacgcacggt
     4381 caccgtgcgg accttgcgat tggcgaggcc accttcactg ttgtcggtcg ttgccgccgc
     4441 cgcattgtcg gtatccgcaa ccccgccctg tgcctggtct gtggaaatca gctgctcgga
     4501 gctcgcggcc tgtgaaacgc cttccatctg ctgcagcacc ggcgacttgg cgaggtcgct
     4561 gctggtggcg gatttgtcga cggcctgcgg cttctccttg atcggcgtgg tgtcggccgt
     4621 cagctgcggg gcagcggcgc cgttggccgg cgcatggcgg cccatgttga gcacccagta
     4681 gagtccaagt ccggctgcca gcagcagcgt cgccgcgacg gccatgccca catactggcg
     4741 cgccccgccc gaaaggaacg aactgcgctg cggcttgacc ttgagccgcc gatacgggct
     4801 ttcgtccccg gcggcgggct cgacccgatc gacgcgggca ccggtcgccg ccgcggccgc
     4861 aaggatcgca tcttcggccc cgctggccgt ccggtcgtcc ttgaggccgg cgcggcgcgg
     4921 cgcaaagctg gtggtgagcg gcggcacgac cggcgccgga tgtggctcgc ggtgggcgat
     4981 ttccgcctcc acctcctgct ccggctcgag ttcgacagtc ggcgccacca gggcggaggc
     5041 ctgcacccga accgggccgg gcgacagctc gacccgcacc gcctcgccga tgaggctctc
     5101 gatctccgac atcggatcgg tgtcgtcgat cgacatcggc tccggcgcgc gcgtcaccgg
     5161 ctggcccagc ggctggccgg cggccggtcg catgttgagc ccgacgcccg gcgaaatcgc
     5221 gaagcggtcg gcctcgggcg agcgcggcgc gacgctcacc ggcttgagcg ggatcggcgc
     5281 attgccggcc ggacgcgcgc cggctggcga aagcggcgcc atcgccggac gcgccggagc
     5341 cggctgcggc gtgacggtgg tgcgcagcat cggggtcact gctgtcgccg ggcgcggtgc
     5401 catcggctgc ggcgccacgg cgacctgcgc cggctcggca ttgatcaagt cggcgatcgg
     5461 atcgggcgtc gcgcgcggcg gattggccgg cgtcggcggc gtcgagctga acccgaaatc
     5521 gaagttgaaa tcgctgcggg cggccggcac ctgcggcgcc acgctcaccg ccgggccggc
     5581 gccgaacgag cggttctcgc tgaccggctt gaggtcggat ggcagccgca cggccggcgg
     5641 tgccgccgcg gcgagccgtt ccgacaggct ggagatcggc tgctgcacga tcggcgccgg
     5701 cgcgatcggc ttgccgaaat cgaatttccc caccggtgcg ctggtcgaaa ccggcgccgg
     5761 ctggtccatt ccggggatgc ggatggagcc cgtcaccggg ccgcgcgtct ccggctgcgg
     5821 cgccggcgcg gcaggcctgg gcgcctccat gccggggatg cgaaccggct gcggcgcagc
     5881 cactgcaggg accgaaggcg tcggcggctg cgggcgctgc agcggccgga cattgctgtc
     5941 tccggccggc ggcgtcgcca tcagcttggc cagttcggcg ataaggtcgt ctgatttatc
     6001 ggccggatcg gacatctgct gcggtctcgc tggcggcatt gactaggctc gctatggtgt
     6061 tggtacccct gctcggcccc cgccgagagt gaagcccagg catcacacca atgcgcccga
     6121 attatgaaag ctcatctgga gcagataccc ccaagaccgt gagcccattg accaaaacct
     6181 gcctgacggc gctcacgagc gcgagtcgcg ccgcagtgag tttcaggtca tcggggttaa
     6241 caaagcgtaa cgccctgtct tccttccctt tggcccagaa ggcgtggaac gcggctgcga
     6301 gttcgtacag gtaaaatgca atacgatggg gctcgtgcgc aagggccgcc gcggtcaccg
     6361 tccgcggcca ctgcgccacg gtgcggatca gctcgatttc ggccgggctc gacagccgct
     6421 cgagcggcgc cgcggcgaga tcgagcgccg ccagcccggg cgccggcagc tccgtcgcgg
     6481 cagtgcgaaa caccgagcag gtccgcgcat gcgcgtactg cacatagaac accggattgt
     6541 ctcgcgtctg ctccttgacc agcgcgaagt cgaaatccat cgccgcgtcg ttccgccggt
     6601 agagcagcat gaagcgcgtg gcgtcgaggc cgacttcctc aaccagctcg gagagcagca
     6661 ccaggtcgcc gctccgcttg ctcatcttca ccggctcgcc gttccgcagc agccgcacca
     6721 gctgcatgat cttgacgtcc atgtccgcct cgttggcgga gacggccttc accgccgcct
     6781 gcagccgctt gacgtagccg gaatggtcgg cgcccagcac attgatcatg tggcggaagc
     6841 cgcgcagata tttgttgcga tggtaggcga tgtcggcggc gaaataggtg tagctgccgt
     6901 ccgacttgat cagcggccga tcgacgtcgt cgccgtagag cgtcgcgcgg aacagcgtct
     6961 gctcgcgatc ctcccagtcg tcgtcgacag cccccttcgg ccggtccagc cggccctggt
     7021 agaccagccc ctgctgccgc agccagtcga gcgtcaggtc gatgtcgccg ccctgcccgt
     7081 gcagcgtccg ctcggagaag aacacctcat gcgtcacccc gaggtcggcg aggtcggtgc
     7141 ggatcaggtc catcatcatc cggagcgtca gttccttgac gacgggcagc cactcggcct
     7201 ccggcattgc cagcaggtcg cgaccgtggg cctcggccag cttctcgccg accggcttga
     7261 ggtagtcgcc cggatacagc ccctgcggga tggtgatcgt ctcgcccagc gcctcgcggt
     7321 agcgcaggaa cgccgaccgg gccagcacgt cgacctgccc gccggcgtcg ttgatgtagt
     7381 actcccgcgt caccgcgtaa ccggcatagt cgagcagcgc cgccagcgcg tcgccgaaca
     7441 ccgcgccgcg cgtgtgcccc acatgcatcg ggccggtcgg attggccgag acgtactcga
     7501 cgttgacccg ctcgccgtgg ccgatatcga tccgcccgaa gtccgccccc agtccggcga
     7561 cagatttcag cacccgctgc cagaccggtt gcttgaggcg gaaattgaga aatcccgcgc
     7621 ccgcgacctc gatgctctcg acatccgggt cggcgcgcag cgcctccgcc agcgccgccg
     7681 cgatctcgcg cggcgatttg cccagcggct tggccaccac catcgcggca ttggagctga
     7741 gatcgccatg gccggcatcg cgcggcggct cggcaacggc gcgcggcagc aactcgtccg
     7801 gcactgccgg gtagagctgt ttcagcgcaa ccgcgacgcg cgcggcgaaa tcggcataaa
     7861 tgtccatgac ggcgaccagt tttcacccgc cacgtcattc ccgcgaaagc gggaatctcc
     7921 gttggcggag cgtgcggctg cgctgcccta acgcacggac ttgggcacgt caaacagccg
     7981 cgcgtgctcg gcctcggcat agggatcggt catcccggcg atgaagtccg caacgatcct
     8041 cgcccggttt gcatcggtcg gcgccgccct tcccgcttcg ccccaccgcc ccggcatgtc
     8101 ggccgtgccg aaataccggt cgaagaggtc cgcgacgacg atctcgcttc gccgcaccgg
     8161 ccccatcacc tgctccgagc ggtacacccg ctcgtagagg aatgccttca gcccccgctc
     8221 tgctgctgcc gtcgcgggcg aaaagccgat cagcgtgcgc cccgcctggc gcacatcgtc
     8281 ggccgaatgc gggtcggcag cggcaatcgc cacgcccgcc tgcgcgatga cgtcctcgat
     8341 cgcccgggtg atcagccgcc gctgcacctc gtgcgtctgc cggctgcgct cgatgtcggg
     8401 ccagcgcccc agcacctccg cgacgatcgg cccgaccagc ggcacgtcga ccagctccgg
     8461 caggtcgatc agccgggccc ggatcgcatc gtcgatatcg tgcgcgttgt aggcgatgtc
     8521 gtcggccacc gcggcggcct gcgcctcgag gctggcatgg gtgccgggca tcagatccat
     8581 ctcgtcgatg ccggcggcca ccggcccgtt gtgcttgagg atgccctcga gcgtttccca
     8641 gctgaggttc aacccgtcat gcgtcgcgta gcggttctcg agccgcgtca ccacccggat
     8701 cgcctggaaa ttgtggtcga agccgcccca cgccgccatc ttgtcatcga ggacacgttc
     8761 gccggcgtgg ccgaacggcg tgtgcccgag gtcgtgcgcc agcgccaccg cctccgccag
     8821 gtcctcgtcg agccgcagcg cccgggcgat cgagcgcgcc atctggctca cttccagcgt
     8881 gtgcgtcagc cgggtgcgga aatgctgtcc ctcgtgctgc aggaacacct gcgtcttgta
     8941 ttgcagccgc cggaacgcgg tggaatggat gattcggtcg cgatcgcgct ggaattccga
     9001 gcgcgtcggg ctgtccgaga cgggatagag ccgcccgtgg ctctgcgccg gattgctggc
     9061 atagggcgcg ttgtcgctca tcagcccctt ttcatcgtca tctaacgata ttaccttgtc
     9121 cgcatgaccg aagccgctct agcaccaaat cccgtcctcc tcaccgaccg cgccgcgaaa
     9181 aagatcggcc gcgtgctgag ccgtcagccg gccggaacgg tgctgcgcat cgtcgtcgcc
     9241 ggcggtggct gctcgggttt ccagtacgaa tacaagctcg tgcaggaaca gccggccaac
     9301 gacgacctgg tgctgagcaa ggacgccgcg actgtactga tcgaccccct cagcctcgaa
     9361 ttcatgggcg gggccgagat cgactatgtc gacgacctga tcggccagag cttccagatc
     9421 aggaacccca acgccgtcgc ctcgtgcggc tgcggcacca gcttcgccat cgcctcgtga
     9481 ccctcgaggc ccgcgtcgat gccgccatcg acgcgg
//
LOCUS       DATAZA010000179         3099 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3965016, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000179 DATAZA010000000
VERSION     DATAZA010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3099
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3965016"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..429)
                     /locus_tag="VHZ56_04580"
     CDS             complement(<1..429)
                     /locus_tag="VHZ56_04580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014762287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase ligase N-terminal
                     domain-containing protein"
                     /protein_id="HEX4297277.1"
                     /translation="MAKTSLAPYRQKRDFSKTPEPAGDGGEPEGNRFVIHKHSATADH
                     YDLRLELDGVLKSWAVPKGPSLNPADKRYAAQTEDHPLDYIDFEGVIPEGEYGGGPMI
                     VWDTGTWAPMGDPAEGLRTGDFKFRLWGDKLKGGWMLVRLK"
     gene            547..1740
                     /gene="uxuA"
                     /locus_tag="VHZ56_04585"
     CDS             547..1740
                     /gene="uxuA"
                     /locus_tag="VHZ56_04585"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018855522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008927 - mannonate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006064 - glucuronate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HEX4297278.1"
                     /translation="MREGWRWFGPGSDVTLDEVRQAGATDIVSALHEVPIGTVWTDAA
                     VAERKNFIETTPAGRVPLSWSVVESIPIPDVIKRRGKEARPEIEGWIASLEAVARAGI
                     RIVCYNFMPVVDWCRTDLDYRTPTGSSAMRFDQQKIAVFDLCIIERPGAEADYTPTEI
                     ATARLQFDRMPADEIAALTRNITSGLPGATTEPLTVPAFRERLAQYRGIDADRLRQHF
                     VGFLEAVVPAAEKLGVTLTLHPDDPPRPLFGLPRISSTAEDFAFIFDAVPSPANGLCF
                     CTGSFGVRADNDLVAIARRFAPRIAFAHLRATRREADPRTFHEAAHLEGDVDMVRVLQ
                     ALLAEDARRDRGRSIVFRPDHGQRMIGDFARQGAPGYPVTGRLRGLAELRGIITALTA
                     AAPAR"
     gene            complement(1825..>3099)
                     /locus_tag="VHZ56_04590"
     CDS             complement(1825..>3099)
                     /locus_tag="VHZ56_04590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HEX4297279.1"
                     /translation="IYPILFLVFPRLWRVCHKRGYITAGDFVRGRFGNRWLALAIAAT
                     GIIATLPYIALQLVGIQVVLGGMGVGGSGLLADLPLIIAFVILAAFTYSSGLRAPASI
                     AVVKDVLIYFTAIVAVIVIPIQLGGFDKIFAAIPPAKLLLATPPAGSTGSFSAYATLA
                     LGSALALFLYPHSLTGILSANSAGAIKRNAALLPGYSFMLGLLTLLGLFAIAAGVDKL
                     PEFAPGFAVFKASFAVPALFIHSFPSWFVGIAFAAIGIGALVPAAIMSIAAANLYSRN
                     IHREFINPAATDRQQSQVAKWVSLVVKIGALGFIVFLPQTYAIQLQLLGGVWIIQTLP
                     AVLIGAYTRWFDDWALFVGWAVGIVLGTWMAATTGFSSSTFTINLFGLAIPGYAALYS
                     LVINLVVAVVLTFVLKPMRKAQLDETAAVDYA"
BASE COUNT          541 a         1066 c         1048 g          444 t
ORIGIN      
        1 cttgagcctg accagcatcc agccgccctt gagcttgtcg ccccacagcc ggaacttgaa
       61 atcgccggtc ctgaggcctt ccgccggatc gcccatcggc gcccatgtgc cggtatccca
      121 gacgatcatc ggaccaccgc catactcgcc ttcggggatc accccctcga agtcgatgta
      181 gtcgagcggg tggtcctcgg tctgcgcggc gtagcgcttg tcggccggat tgagcgacgg
      241 tcccttgggc accgcccagc tcttcagcac cccatcgagc tccagccgga ggtcgtagtg
      301 atcggcggta gccgagtgct tgtgaatgac aaagcggttg ccctccggct cgcccccgtc
      361 gcccgccggt tccggggtct tgctgaaatc gcgcttctgc cggtacgggg caagggaggt
      421 tttggccatg ccgccgttgg tagaacagga cggcgtcggc gcaaagcacg accgcagtgg
      481 caccgggcgc tccggcgcga taggaaggac gccgaagggc cgaccggcac tggaggagac
      541 taagaaatgc gcgaaggctg gcgctggttc ggacccggat ccgatgtgac gctcgacgaa
      601 gtccggcagg cgggcgcgac cgatatcgtc tccgcgctgc acgaggtgcc gatcggcacc
      661 gtgtggaccg acgccgccgt cgccgagcgc aagaatttca tcgagaccac cccggccggc
      721 cgcgtgccgc tgagctggtc cgtggtcgaa tccatcccca tcccggacgt gatcaagcgc
      781 cgcggcaagg aagccaggcc cgagatcgag ggctggatcg cgagcctcga ggccgtcgcc
      841 cgcgccggca tccgcatcgt ctgctataat ttcatgccgg tggtcgactg gtgccgcacc
      901 gatctcgact accgcacccc gaccggctcg tcggcgatgc gcttcgacca gcaaaagatc
      961 gccgtcttcg atctctgcat catcgagcgc cccggcgccg aggccgacta cacgcccacc
     1021 gaaatcgcaa ccgcgcggct gcagttcgac cggatgcccg ccgacgagat cgcggccctg
     1081 acccgcaaca tcacctcggg attgcccggc gcgaccaccg agccgctgac ggtgccggcc
     1141 ttccgcgaac gcctcgcgca gtatcgcggc atcgacgccg atcgcctgcg ccagcacttt
     1201 gtcgggttcc tcgaagccgt ggtgccggcc gccgaaaagc tcggcgtcac gctgacgctc
     1261 catcccgacg atccaccgcg gccgctgttc gggctgccgc gcatctcctc gaccgccgag
     1321 gactttgcat tcatcttcga tgccgtgccc tcaccggcca acggcctctg cttctgcacc
     1381 ggcagcttcg gcgtgcgcgc cgacaacgac ctcgtcgcca tcgccagacg cttcgccccg
     1441 cgcatcgcct tcgcgcattt gcgggcgacc aggcgcgagg ccgatccgcg caccttccac
     1501 gaggctgcgc acctcgaggg cgacgtcgac atggtgcgcg tgctgcaggc gctgttggcc
     1561 gaggatgccc ggcgcgacag gggtcgcagc atcgtcttcc gtcccgacca cggccagcgg
     1621 atgatcggcg acttcgcccg gcagggcgcc cccggttatc cggtgaccgg ccggctgcgt
     1681 ggcctcgccg agctgcgcgg catcatcacc gccctcaccg ccgcggcgcc ggcgcgctga
     1741 cggaacagct ggctggcgga ctcgtggagg ggccgccgga ccgggccgca atgccgctgc
     1801 cgctcgaccg cagatcgagc agcactaggc gtagtcgacc gccgcggttt cgtcgagctg
     1861 cgccttgcgc atcggcttca gcacgaacgt cagcaccacc gccaccacga gattgatgac
     1921 gaggctgtag agcgcggcgt agccggggat ggcgaggccg aacagattga tggtgaaggt
     1981 cgaggacgag aatccggtcg tcgccgccat ccacgttccg aggacgatgc ccacggccca
     2041 gccgacaaac agcgcccagt cgtcgaacca gcgcgtgtaa gcgccgatca gcaccgccgg
     2101 cagggtctgg atgatccaca cgccgccgag cagctgcagc tggatggcgt aggtctgcgg
     2161 caggaagacg atgaacccga gggcgccgat cttgacgacc agcgacaccc atttggcgac
     2221 ctgcgactgc tgccggtcgg tcgccgcggg attgatgaat tcgcggtgga tgttgcgcga
     2281 gtagagattg gccgcggcga tcgacatgat cgccgcgggc accagcgcgc caatgccgat
     2341 ggcggcgaag gcgatgccga cgaaccacga cggaaagctg tggatgaaca gcgccggcac
     2401 cgcaaaactc gccttgaaga ctgcaaagcc cggcgcgaac tccggcagct tgtcgacgcc
     2461 cgccgcgatc gcgaacaggc cgagcagcgt cagcaggccc agcatgaagg agtagccggg
     2521 cagcagcgcc gcgttgcgct tgatcgcgcc cgcggagttg gcgctgagga tgccggtcag
     2581 cgaatgcggg tagaggaaca gcgccagggc cgagcctagc gccagcgtcg cgtaggccga
     2641 gaacgagccg gtggacccgg ccggcggcgt tgccagcagc agcttggccg gcggaatggc
     2701 ggcgaagatc ttgtcgaagc cgcccagctg gatcgggatc acgatcaccg cgacgatcgc
     2761 ggtgaagtag atcagcacgt ccttgacgac ggcgatcgag gcgggtgcgc gcaggccgct
     2821 cgaataggtg aacgcggcga ggatgacgaa cgcgatgatc agcggcaaat cggcaagcag
     2881 gccgctgccg ccgaccccca tgccgccgag caccacctgg atgccgacga gctgcagcgc
     2941 gatatagggc agcgtggcga tgatgccggt cgccgcgatg gcgagcgcca gccagcgatt
     3001 gccgaagcgc ccgcggacga aatcgccggc ggtgatgtag ccgcgcttgt ggcagacccg
     3061 ccagagccgc gggaacacca ggaacaggat cgggtagat
//
LOCUS       DATAZA010000180         6234 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1643679, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000180 DATAZA010000000
VERSION     DATAZA010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6234
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1643679"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1062
                     /locus_tag="VHZ56_04595"
     CDS             <1..1062
                     /locus_tag="VHZ56_04595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008504345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX4297280.1"
                     /translation="RGIWPWMRTNLFGSVSDTILTIVGVAIALSVLVPLVNWALINAT
                     WDAPTRDACAANTAGACWAFVRANFGQFIYGRYPDPERWRVNVFFVLMAAGIIPLAIP
                     SAPFKPFNLLYIFIIFPVVSGVLLLGGVFGLPQVETALWGGLFLTLVVSYVGMAMSLP
                     LGVLLALGRRSTMPAIRYVCVLFIELCRGVPLITVLFMAGILLPLFLPTGVNFDKLLR
                     ALLGLSLFASAYMAEVIRGGLQAVPRGQYEGAKALGLGYWHMTRLIVLPQAITIVIPG
                     IVNTFIGLFKDTSLVYIISIFELLYTVRNSFSDPTWSTSTTPASGLAFAAAVFWIFCF
                     SMSRYSQFVETRMRAGYRR"
     gene            1178..2044
                     /locus_tag="VHZ56_04600"
     CDS             1178..2044
                     /locus_tag="VHZ56_04600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015341589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family acid phosphatase"
                     /protein_id="HEX4297281.1"
                     /translation="MKLFSHAMVPSISVAAMVLAAVVPALAADAVPQNDNLNAVVWDQ
                     TSVEFKANTLGAYALGMLRLDQGLADKTWTAAPAEQTGSFADLPPAVILDVDDTIVNT
                     SDYQAWTVTANTAYSGKTWGAYVAAEKDVAIPGAVEFTKYADSKGVKVFYVTNRTEDQ
                     EAPTREEMTKMGFPMGGNVDTFLAAKEQPDWTSAKGTRRAFIAKSYRIVLMFGDNMGD
                     FTDQFGGSVADRDKVYEADMAHWGHDWIALPNPTYGSWESAPYLTDYSKSVDEQRKEK
                     LATLSPWAGPTQ"
     gene            complement(2083..2346)
                     /locus_tag="VHZ56_04605"
     CDS             complement(2083..2346)
                     /locus_tag="VHZ56_04605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002719104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX4297282.1"
                     /translation="MMESQAEHREVPRRTTLKGGRIVFNSSYSTLDCKVRNLSPKGAK
                     LVFASVLGVPDSFELIFEDRTRRPCRVIWRRLNELGVEFATAH"
     gene            complement(2443..2811)
                     /locus_tag="VHZ56_04610"
     CDS             complement(2443..2811)
                     /locus_tag="VHZ56_04610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297283.1"
                     /translation="MLRTLIALTALGFSIPVAMAAPKSGPTDEQVYERQCADVLNFLP
                     RIVRPDAVAALPPNAHVSLHSICTGVPLEDFGNAAGLGHQIAANPAMAAALARNGLST
                     DNVVAIEIDGNSAQLYVHQD"
     gene            2931..3026
                     /gene="ffs"
                     /locus_tag="VHZ56_04615"
     ncRNA           2931..3026
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VHZ56_04615"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            3099..4868
                     /locus_tag="VHZ56_04620"
     CDS             3099..4868
                     /locus_tag="VHZ56_04620"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEX4297284.1"
                     /translation="MADGLFPEPAPDAPAEAAAAPYLVLARKYRPSSFSSLIGQDAMV
                     QTLRNAFRANRVPHAFMLTGIRGVGKTTTARILARAVNFEDATGRHPTLDLDREGIHD
                     RAIIEGRHVDVVEMDAASNTGINDIREIIDSVKYGPVSAPFKVYIIDEVHMLSTAAFN
                     GLLKTLEEPPPYVKFIFATTEIRKVPVTILSRCMRFDLRRVPPETMTAHLVDLLGKEG
                     IGYEPEALAMIVRAGEGSVRDCQSLLDQAISHGDGQVTAATVKAMLGLGDRARSIDLF
                     EALMRGDIAAALVLLRELYDAGADPETVVGDLADFTNLVTRIKVVPAAADDLSLTPDE
                     RSRAPQLAQGLGMRALSRAWQILFKGIEEIKTAGNGLQAAEMVLVRLAFASELPSPDE
                     LIGRLQNAPQPVSGAAVPHRGNIGGGPQAMLRPLEMPRVEGATAAMPKAAAVAVPQAL
                     ASPRSYLDLVALAGERRDILLKTALEQQLLPVAFREQSIEVALVDGADPAIIQTLSRR
                     LREWTGQVWGVSVSSRIASGPTLRDVRDERQEQARAVAAEDPLVKAIVDMFPGARVSV
                     TTRAEDVPDTAYEDAFTDEREDE"
     gene            4868..5191
                     /locus_tag="VHZ56_04625"
     CDS             4868..5191
                     /locus_tag="VHZ56_04625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010913283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEX4297285.1"
                     /translation="MVDFMGMMKKAEELQGRMQSLQDELGRLLVDGQSGGGLVTVSLS
                     GKGEMKALKIDPSLFREDNAEVLEDLILAAHADAKQKVESQMQQKMAQMTEGLPLPPG
                     MKLPF"
     gene            5195..5788
                     /gene="recR"
                     /locus_tag="VHZ56_04630"
     CDS             5195..5788
                     /gene="recR"
                     /locus_tag="VHZ56_04630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007009200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HEX4297286.1"
                     /translation="MASAGPEIEQLIQLLARLPGLGPRSARRAVLQLIKKKDSLMVPL
                     AAALDRAVDAVRVCEVCGNVDTRSPCGVCSDPRRDSGLLIVVEDVADLWALERAGVGA
                     VKYHVLGGVLSPLDGVGPDDLSIDQLLRRAADFAEVVLAMNATVEGQTTAHYITDRLA
                     GTGARITRLAHGVPVGGELDYLDEGTLSQALKARTAM"
     gene            complement(5806..>6234)
                     /locus_tag="VHZ56_04635"
     CDS             complement(5806..>6234)
                     /locus_tag="VHZ56_04635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297287.1"
                     /translation="GAGVSLTALPVSQAEIDDLLYGDDRPAEERIARLQELAGLLRND
                     EPGDFGDHDPRALLGEVEEAIARLAGASEPDAELAEDEVSADDDPLNHRETLAPDSDE
                     LEEIEDDDKASLTDGSEPLETMCSIRRNGTMATGSMSIAA"
BASE COUNT          999 a         2148 c         2016 g         1071 t
ORIGIN      
        1 cgcggcatct ggccgtggat gcgcaccaat cttttcggca gcgtcagcga taccatcctg
       61 accatcgtcg gcgtcgccat tgcgctgtcc gtgctggtgc cgctggtcaa ctgggcgctg
      121 atcaacgcca cttgggacgc acccacccgc gatgcctgcg cagccaatac tgcgggggcc
      181 tgctgggcct tcgtgagggc caatttcggg cagttcatct atggccgcta cccggatccc
      241 gagcgctggc gcgtcaacgt gttcttcgtg ctgatggcgg ccggcatcat cccgctcgcc
      301 atcccgtcgg caccgttcaa gccgttcaac ctgctctaca tcttcatcat ttttccggtc
      361 gtcagcggcg tgctgttgct gggcggcgtc ttcggcctgc cgcaggtgga gacggcgctc
      421 tggggcggcc tcttcctgac cctggtggtg tcctatgtcg gcatggcgat gtcgctgccg
      481 ctcggcgtgc tgctggccct tggccggcgc tcgaccatgc cggcgatccg ctacgtctgc
      541 gtgctcttca tcgaactctg ccgcggcgtg ccgctgatca cggtgctgtt catggccggc
      601 atcctgctgc cgctgttcct gccgaccggc gtcaacttcg acaagctgtt gcgcgccctg
      661 ctcggactgt cgctgttcgc ttcggcctac atggcggagg tgatccgcgg cggcctgcag
      721 gcggtgccac gcggccagta cgaaggcgcc aaggcgctcg gcctcggcta ttggcacatg
      781 acgcggctga tcgtcctgcc gcaggcgatc accatcgtca ttccgggcat cgtcaacacc
      841 ttcatcggcc tcttcaagga caccagcctc gtctacatca tctcgatctt cgagttgctc
      901 tatacggtcc gcaacagctt ctccgacccg acctggtcga cctccaccac gcccgcgtcc
      961 ggactggcgt tcgccgcggc ggtgttctgg atcttctgtt tctcgatgag ccggtattcg
     1021 cagttcgtcg agaccaggat gcgggccggg taccggcgct gaggccgcag gcctcgggtt
     1081 gcggactgtc acaatcggtg aaaagcttcc ggctaggctc gccgccgcgg gtgcccctgc
     1141 gggccgcgcg atcgtctttg caacagggag taatgcgatg aagctcttca gccacgccat
     1201 ggtgccgtcg atctcggtcg ccgccatggt gctcgcggcc gtcgtgccgg ccctcgccgc
     1261 cgatgccgtg ccgcagaacg acaatctcaa cgccgtcgtc tgggaccaga catccgtcga
     1321 gttcaaggcc aacacgctcg gcgcctacgc cctcggcatg ctgcgcctcg accaggggct
     1381 ggccgacaag acctggaccg cggcgcccgc cgaacagacc ggcagtttcg ccgacctgcc
     1441 gcccgccgtc atcctcgatg tcgacgacac catcgtcaac acgtcggact accaggcctg
     1501 gaccgtcacc gccaacaccg cctattccgg caagacctgg ggcgcctacg tcgccgccga
     1561 gaaggatgtc gccatccccg gtgccgtgga gttcaccaag tacgccgaca gcaagggtgt
     1621 aaaggtgttc tacgtcacca accgcaccga ggaccaggaa gccccgacgc gcgaggagat
     1681 gaccaagatg ggcttcccga tgggcggcaa tgtcgacacc ttcctcgccg ccaaggagca
     1741 gcccgactgg acctcggcca agggcacccg gcgcgccttc atcgccaaga gctaccgcat
     1801 cgtgctgatg ttcggcgaca acatgggtga tttcaccgac cagttcggcg gcagcgtcgc
     1861 cgatcgcgac aaggtctatg aagccgacat ggcgcactgg ggccacgact ggatcgcgct
     1921 gcccaacccg acctacggct cgtgggaatc cgcgccctac ctcaccgact attccaagag
     1981 cgtcgacgag cagcgcaagg aaaagctggc gaccctcagc ccgtgggccg gtccgacgca
     2041 gtagcgtctg aatgatctag ccgttccgct ccggcgggac ggctaatgcg ccgtggcgaa
     2101 ctcgacgccc agctcgttca gccggcgcca gatcacccgg caggggcggc gggtgcggtc
     2161 ctcgaagatc agctcgaagc tgtccggcac gccgagaacc gaggcgaaca ccagcttcgc
     2221 ccctttcggc gacagattgc gcaccttgca atccagcgtc gaatagctgg aattgaacac
     2281 gatgcgcccg cccttgagcg tggtgcgccg cggcacctcg cgatgctcgg cctgggactc
     2341 catcatgagc gcctccttcc gcccgcagat ggggagaaaa gtgcgcccat catagcgtcc
     2401 ctcgccaact ttccgggcat ttccgcaaaa cgcggttaat cctcagtcct ggtggacgta
     2461 gagctgggcg ctgttgccgt cgatctcgat ggcgaccacg ttgtcggtac tgaggccgtt
     2521 gcgggcaagg gccgcggcca tcgccggatt ggccgcgatc tggtggccga ggcccgcggc
     2581 attgccgaaa tcttcgagcg gcacgccggt gcagatggaa tgcaaggaca catgcgcgtt
     2641 cggcggcagc gccgccaccg catccggccg cacgattcgc ggcaggaagt tgagaacgtc
     2701 ggcgcattgc cgctcgtaga cctgctcgtc ggtcgggccg gatttgggcg ccgccatggc
     2761 caccggaatg ctgaagccga gcgccgtgag cgcgatcagg gttctgagca tttgaaatct
     2821 cctgcttgct accctcgata taacgtcggg gcccccggtt tagtctgcgc gccgacgtta
     2881 aattgccgta acccttgcct tgccggttat cctggccgat atagccgctc gagaggttgg
     2941 cgcggacgtg ttcctcgcca accgggtcag gtccggaagg aagcagcccc aacgagacct
     3001 tcacgggtcg atgccagcct ctcgccttcc cacatgaatc cggatttttg gcctctgccg
     3061 cttttgcgcg gggcgccccg gatcgctata tactttccat ggccgacgga ctcttcccag
     3121 aaccagcccc agatgccccg gcggaggcag ccgcagcccc gtacctggtg ctggcgcgca
     3181 aataccggcc gtcgagcttt tcgtcgctga tcggccagga tgcgatggtg cagacgctgc
     3241 gcaacgcctt ccgcgccaat cgcgtgccgc acgccttcat gctcaccggc atccgtggcg
     3301 tcggcaagac gacgaccgcg cgcatcctcg cccgggccgt caatttcgag gatgcgaccg
     3361 gtcgccatcc gaccctcgat ctcgaccgcg agggcatcca cgaccgggcg atcatcgaag
     3421 gccggcatgt cgacgtagtc gagatggacg cggcgtccaa caccggcatc aacgatatcc
     3481 gcgagatcat cgactcggtg aaatacgggc cggtgtcggc gccgttcaag gtctacatca
     3541 tcgacgaggt gcacatgctg tcgacggcag ccttcaacgg gctgctgaaa acgctcgagg
     3601 agccgccgcc ctatgtgaag ttcatcttcg ctaccaccga aatccgcaag gtgccggtca
     3661 ccatcctcag ccgctgcatg cgcttcgacc tgcgccgcgt gccgcccgag acgatgacgg
     3721 cgcatctggt ggacctgctc gggaaggaag gcatcggcta cgaacccgag gccctggcga
     3781 tgatcgtgcg ggccggcgag ggcagcgtgc gcgattgcca gagcctgctc gaccaggcga
     3841 tcagccacgg cgacggccag gtcaccgccg cgaccgtcaa ggcgatgctc ggtcttggcg
     3901 accgggccag gtccatcgac ctgttcgagg cgctgatgcg cggcgacatc gcggcggcgc
     3961 tggtgctgct gcgcgaactc tacgacgccg gcgccgatcc ggagacggtg gtcggcgacc
     4021 tcgccgattt caccaatctc gtgacccgca tcaaggtcgt gccggcggcc gccgacgacc
     4081 tgtcgctgac gcccgatgag cgcagccgcg cgccgcaact ggcccagggg ctcggcatgc
     4141 gggcgctgag ccgcgcctgg cagatcctgt tcaagggcat cgaggagatc aagaccgccg
     4201 gcaatggcct gcaggctgcc gaaatggtgc tggtgcgcct ggcctttgcc agcgaactgc
     4261 ccagccccga cgaactgatt ggccgcctcc agaacgcgcc gcagccggtc agcggcgcgg
     4321 ccgtgccgca ccgcggcaac atcggcggcg gcccgcaggc gatgctgcgt ccactcgaga
     4381 tgccgcgggt cgagggtgcc acggcagcga tgccgaaagc cgccgcggtc gcggtgccgc
     4441 aggcgctggc ttccccgcgt tcctatctcg acctcgtggc gttggccggc gagcgacgcg
     4501 acatcctcct caagaccgcg ctcgagcagc aactcctgcc ggttgccttt cgcgagcagt
     4561 cgatcgaagt ggcgctggtc gacggcgccg atccggccat catccagacc ctgtcgcggc
     4621 ggctgcgcga gtggaccggg caggtctggg gcgtctcggt ctccagccgt atcgcgtctg
     4681 gcccgacgct gcgcgacgtg cgcgacgaac ggcaggaaca ggcccgcgcc gtggccgccg
     4741 aagatccgct ggtgaaggcg atcgtcgaca tgttccccgg cgccagggtc agcgtgacga
     4801 cgcgcgccga ggacgtgccc gataccgcct acgaggatgc ctttaccgac gagcgcgagg
     4861 acgagtgatg gtcgatttta tgggcatgat gaagaaggcc gaggagctgc agggccgcat
     4921 gcagtcgctg caggacgaac tcggccggct actggtcgac ggacaatccg gcggcgggct
     4981 ggtcaccgtg tcgctcagtg gcaagggcga gatgaaggcc ctgaagatcg atccctcgct
     5041 gttccgcgag gacaacgccg aggtgctcga ggatctgatc ctcgccgccc acgccgacgc
     5101 caagcagaaa gtcgaatcgc agatgcagca gaagatggcg cagatgaccg agggcctgcc
     5161 gctgccgccc ggcatgaaac tgccgttcta gtcgatggcg agcgccggcc ccgagatcga
     5221 gcagctgatc cagctcctgg cgcgcctgcc tgggctcggt ccgcgctcgg cccgccgcgc
     5281 cgtgctgcag ctgatcaaga agaaggactc gctgatggtg ccgctcgccg ccgcgctcga
     5341 tcgtgcggtg gacgccgtca gggtctgcga ggtctgcggc aatgtcgata cccgttcccc
     5401 gtgcggcgtc tgctccgatc cgcggcgcga cagcggcctg ctgatcgtcg tcgaggacgt
     5461 cgccgatctc tgggcgctgg agcgcgccgg agttggcgcg gtcaagtacc acgtgctcgg
     5521 cggcgtgctc tcgccgctgg atggcgtcgg cccggacgac ctgtcgatcg accagctgct
     5581 gcgtcgggct gccgattttg ccgaagttgt cctcgccatg aacgccacgg tcgagggcca
     5641 gaccaccgcg cactatatca ccgaccggct ggccggcacc ggggcgcgca tcactcggct
     5701 ggcgcatggc gtgccggtgg gtggcgagct cgactatctc gacgagggca cgctgagcca
     5761 ggccctcaag gcgcgcacgg caatgtagtc cggcgcagct ctacttcacg ccgcgatcga
     5821 cattgaaccc gtcgccatcg tcccattccg ccggatcgag cacatcgtct cgagcggctc
     5881 gctgccgtcg gtgagcgagg ctttgtcgtc gtcctcgatc tcttccaatt cgtcggagtc
     5941 gggggccagc gtctcgcgat ggttgagcgg atcgtcgtcg gccgacacct cgtcctcggc
     6001 aagctcggcg tcgggctccg aggcaccggc aagccgcgcg atcgcctcct cgacttcccc
     6061 cagtagggcc cgtggatcgt ggtcgccgaa atcgccgggc tcatcgttgc gcaacaggcc
     6121 cgcgagttcc tgcagccggg caatccgctc ctccgccgga cggtcgtcgc cgtaaagcag
     6181 gtcgtcgatc tccgcctggc tgaccggcag cgccgtcagc gatacaccgg cccc
//
LOCUS       DATAZA010000181        10722 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1643686, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000181 DATAZA010000000
VERSION     DATAZA010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 10722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10722
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1643686"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..561)
                     /locus_tag="VHZ56_04640"
     CDS             complement(<1..561)
                     /locus_tag="VHZ56_04640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008548836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX4297288.1"
                     /translation="MGVETLTFGCRLNANESEVIRAEAEKAGLADALVVNTCAVTAEA
                     VRQAKQAIRKARRDAPDRKIIVTGCAAQTEARSFGDMAEVDLVIGNVDKLKAESYAPI
                     AFGLPLNDKVQVNDIMSVRETAGHMIDAMDGRARAFVQVQNGCDHRCTFCIIPYGRGP
                     SRSVPMGVVVEQIKRLAGNGFREVVLT"
     gene            complement(561..1436)
                     /gene="dapF"
                     /locus_tag="VHZ56_04645"
     CDS             complement(561..1436)
                     /gene="dapF"
                     /locus_tag="VHZ56_04645"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018430355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEX4297289.1"
                     /translation="MSEAHFLKMNGLGNEIIVADMRGRADRVTPQAAVALNADPATRY
                     DQIMAIHDPRTAGTAHYIEILNSDGSLAEACGNGMRCVVQALSAETGRKSFVFETLAG
                     ILTGEEHADGTITVDMGKPRFGWQDIPLSEEFYDTTGIELQIGPIDAPVLHTPSAVSM
                     GNPHATFWVEDDVGNYALDRFGPLLENHPIFPERANISIAQVVSPTHIIVRTWERGAG
                     LTRACGTAACAALVNAARTKRTGRKATVTLPGGDLAVEWRADDHVMLTGPAEYEFSGA
                     FNPQSGSWSRDRVDA"
     gene            1572..3677
                     /locus_tag="VHZ56_04650"
     CDS             1572..3677
                     /locus_tag="VHZ56_04650"
                     /inference="COORDINATES: protein motif:HMM:NF024905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEX4297290.1"
                     /translation="MATLADASEAGAARSPRRLGLVDRLGASDPALSRLRLASRALLS
                     SLLVAAVLAGITLLHPLPIAAYGLAVVIAFSGSMAVRDATARGQLTTRFYAFIAAVVL
                     AAVAGVLASLPVVADLAFLAVIFGAVYVRAYGQRWFAIGLLAVMAYFMGDYMRPQPAD
                     IGWLALAAAIAFAATHLTTVYILRDDPERDFRRALRTLDQRLALIVGALGGAGHAPGP
                     LDRRPFQQQLAQFREIVLMAEGFIPQGEKGSLAAAGAASDLAVALFDLQLVVERLVRA
                     SYIALPPPELPGLALAHDTAGLRRAAQAGPAEGPAAVTAGLLLRLDLARTRLGTALGS
                     APSPAFRLPPPSPAAAPAATPATGPRPLIPLALQLPIQVTLACAIAMAGGLLLSPVRW
                     YWAVLTAFIVFNNARSRADTALRALQRSGGTFAGLIGGTLLATLLHGQLVASAIGIPI
                     LFFLAFYFVQASYGVMIFFVTLALALLYGVMGSFTPELLVLRLGETVIGALAGVLTAF
                     VIFPARASLTAGAALDKYLGALADLLAAAGRRAHGEPEPQHLLARSRLLDRAYTELAA
                     AVRPLGGPWSAVTRFGEVRERLLLLTGCAHWGRVLARSLRPGEPLPPASLERLDALLA
                     EVSARIGAAGAIRETFFERPHLPDGAVTAATPRPPVPISADEDPAFALTVIAALLDRA
                     TLAAVPAGAADAGPAPALP"
     gene            3881..5488
                     /gene="ffh"
                     /locus_tag="VHZ56_04655"
     CDS             3881..5488
                     /gene="ffh"
                     /locus_tag="VHZ56_04655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004688734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEX4297291.1"
                     /translation="MFESLSDRLGKIFDGLTGRGALSPADVDAALREVRRALLEADVS
                     LEVVKAFVDQVRERAVGAEVTRAVKPGQQVIKIVHDELVKVLGTTPVPLDFNATPPVA
                     ILMVGLQGSGKTTTTAKIAKRLKERQGKKVLLASLDTRRPAAMEQLRVLGEQVGVDTL
                     PIVTTETPVQIARRALGEGRLGGYDVLILDTAGRTHIDEELMAETAEIKAVTNPHEIL
                     LVADALTGQDAVNLARSFDARVDISGIVLTRVDGDGRGGAALSMRAATGKPIKLIATG
                     EKLDALEDFRPASIADRILGMGDIVSLVEKAAQTVSAEDAARMAKKLRKGSFDLEDLR
                     AQLLQMKKMGGVGALMGLMPGMGQLKKAMNGANVDEKVFDRQVAIINSMTRAERADPD
                     LLNARRRIRIAGGSGTRVEDVNKLMKQHRQMADMMKKVSKGGMGALSGMFGGKAGQMM
                     PGLGSMDPSKMDPAQLEQMARQMGIDPAAIQQAAGAAQPPADIAQKLPADVGQLLKSG
                     SGLPGLGGASRFPGLPGLGGGYVPKKK"
     gene            5525..5896
                     /gene="rpsP"
                     /locus_tag="VHZ56_04660"
     CDS             5525..5896
                     /gene="rpsP"
                     /locus_tag="VHZ56_04660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018097407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEX4297292.1"
                     /translation="MSLKLRLARAGTTKRPYYHVVVADARSPRDGRFIEKLGTYDPML
                     SDETKRVTLVAERIQHWLGVGAQPTDRVLRFLDAAGLLKRAARNNPERAKPGKKATER
                     TEARAKAAADKTAAAEAPAAE"
     gene            5898..6434
                     /gene="rimM"
                     /locus_tag="VHZ56_04665"
     CDS             5898..6434
                     /gene="rimM"
                     /locus_tag="VHZ56_04665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315979.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEX4297293.1"
                     /translation="MVDTSRRLLMGRVGAAHGVRGEVRIQSFTEEPLALASYGPLGTD
                     RPGLTIEIEAARATTNVLVARLKGVTDRSAAEKLNGVELYVSRDRLPPPAADDDFYHA
                     DLLGLEARLGDGTVLGKVSAIPNFGAGDLLEVTDARTGDTYLYPFTRAVVPEVRMADG
                     YLLIEVPVDADPGEEEPD"
     gene            6431..7111
                     /gene="trmD"
                     /locus_tag="VHZ56_04670"
     CDS             6431..7111
                     /gene="trmD"
                     /locus_tag="VHZ56_04670"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008873407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEX4297294.1"
                     /translation="MSFAADIVTLFPELFPGPLGASVIGRGAAQGLWSLRLTQLRDFA
                     TDRHRSVDDTPAGGGAGMVLRPDVLAAAIDSVAGQNDPRPRLLLSPRGARLTQARARA
                     LAAGPGIVLVCGRFEGVDERIIEARNLEEISIGDYVLAGGEVAAMVLLEAVVRLIPGV
                     LGADESIATESFENGVLEYPQYTRPQLFEGRDIPPVLTSGDHGKVARWRREAAEKLTR
                     TRRPDLLG"
     gene            complement(7114..7992)
                     /gene="copD"
                     /locus_tag="VHZ56_04675"
     CDS             complement(7114..7992)
                     /gene="copD"
                     /locus_tag="VHZ56_04675"
                     /inference="COORDINATES: protein motif:HMM:NF033808.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006825 - copper ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis membrane protein CopD"
                     /protein_id="HEX4297295.1"
                     /translation="MDAIFVACRFAHFSAAMLLFGISVFDGALVPDGLRPRLAGLGGR
                     VSAGLVGVLVLTGLAWFGLEAGEAGDGWSDVVNPGVWDGLATGTAFGAAWMWHLAILA
                     ILIVAVLLRGPTRRGLLIAGSAAVLASLGFVGHAAMQDGALGWAHRLNHALHLISAGF
                     WVGSLVPLLACLLALRQAASRDDAAIALARFSGFGHVAVAVVLVTGIVNTALTLGRAP
                     LDPASPYQLLLAIKIGLVALMVGIAVANRYVFTPQLPSGAPRASRGLVLGTVAELAIG
                     VVVIGLVSAFATFDPV"
     gene            complement(7998..8360)
                     /gene="copC"
                     /locus_tag="VHZ56_04680"
     CDS             complement(7998..8360)
                     /gene="copC"
                     /locus_tag="VHZ56_04680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003572912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_process: GO:0006825 - copper ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis periplasmic binding protein
                     CopC"
                     /protein_id="HEX4297296.1"
                     /translation="MRHMKTTLITTAFLLLAASPALAHAHLITAVPANAAIVAVAPTA
                     LTLSFSEGVALSFTGITLTGPGGAVALGAAHLEGSDGTVLVVPLATALPPGPYTVAWH
                     ALSTDGHKTSGSYGFTVK"
     gene            complement(8363..8932)
                     /locus_tag="VHZ56_04685"
     CDS             complement(8363..8932)
                     /locus_tag="VHZ56_04685"
                     /inference="COORDINATES: protein motif:HMM:NF016221.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HEX4297297.1"
                     /translation="MTVLRFAAPAAFLLAAVPTAALAASGIVAGCPAGQSFSAGPITV
                     SGAFLRATPKGAQSAGGYLTISNTGASADIFTGASSPAADSVELHQMKMNGNVMEMSD
                     VSGGLPIPPGGSLRLDPFGYHLMLTGMAAPFVQGDCVAMTLHFATAGDIPVEFNVGSM
                     GQATAPAASGGVSVMPSGGMDMSSMSMGM"
     gene            complement(8973..9332)
                     /locus_tag="VHZ56_04690"
     CDS             complement(8973..9332)
                     /locus_tag="VHZ56_04690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297298.1"
                     /translation="MRPAESVRRLVVRELLLALLVLALAFLNFGAASMAFAGGTATVA
                     GVAAPICGDPLSGGDDGSHMACHACRPNVPLLPPVPAVPSAVCFTAQPVAYADLVPAM
                     AATGRTLAALPRGPPAA"
     gene            9536..10045
                     /gene="rplS"
                     /locus_tag="VHZ56_04695"
     CDS             9536..10045
                     /gene="rplS"
                     /locus_tag="VHZ56_04695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012709698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEX4297299.1"
                     /translation="MPNIIAELDKEQHDALAARSSHPDFTHGDTVKVWVKVREGEKER
                     LQAYEGVVIARLGHGLNESFTVRKISYGEGVERVFPVLSPNIDRIEVLKRGKVRRAKL
                     YYLRDRRGKSARIFESTNARTRKIEAGERDAALEAKSAREAEKVAAAEALARELAEKE
                     AAEAAAKAE"
     gene            10117..10713
                     /locus_tag="VHZ56_04700"
     CDS             10117..10713
                     /locus_tag="VHZ56_04700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297300.1"
                     /translation="MGTPDSRAAAAQALRDEARAFLSQTGLFALLQAQFGDPTVTGSA
                     GYDLMVWRDIDIHLPLEPERWPEWMAFGGRLAELFDAIGLGLHKASYLNAYVEPHPQG
                     AGLCWSLDARDFAGNPWQVDIWGWDPFDYAVRQARDFSLRTDLRAADRDLILRLKTEA
                     RARDNYHGVKVSSWDIYRFAIARAGDSLGALEQWKRTQ"
BASE COUNT         1600 a         3985 c         3600 g         1537 t
ORIGIN      
        1 ggtcagcacc acttcgcgaa aaccgttgcc ggcgaggcgc ttgatctgct cgaccacgac
       61 gcccatcggc accgagcgcg atggcccgcg gccatagggg atgatgcaga aggtgcagcg
      121 atggtcgcag ccgttctgca cctggacgaa agcgcgggcc cggccgtcca tggcgtcgat
      181 catgtggccg gcggtttccc gcacgctcat gatgtcgttg acctgcacct tgtcgttgag
      241 cggcaacccg aaagcgatgg gcgcgtagct ctcggccttc agcttgtcga cattgccgat
      301 gacgaggtcg acctcggcca tgtcgccgaa ggagcgcgcc tcggtctgcg ccgcgcagcc
      361 ggtgacgatg atctttcggt cgggcgcgtc gcggcgggcc ttgcggatcg cctgcttggc
      421 ctgccgcacc gcctcggccg tcaccgcgca ggtgttgacc acgagcgcgt ccgccagccc
      481 cgccttttcg gcctcggccc ggatcacctc ggattcgttg gcgttgagac ggcagccgaa
      541 ggtgagggtc tcgacgccca tcaggcgtcg accctgtcgc ggctccagct gcccgattgc
      601 gggttgaagg cgccggaaaa ctcgtattcg gccggcccgg tcagcatcac atggtcgtcg
      661 gcgcgccact ccaccgccag atcgccgccc ggcagcgtca cggtggcctt gcgcccggtc
      721 cgcttcgtgc gcgccgcgtt gaccagcgcc gcgcacgccg cggtgccgca cgcccgcgtc
      781 agcccggcgc cgcgctccca ggtgcgcacg atgatgtggg tcggcgacac cacctgcgcg
      841 atcgagatgt tggcccgctc gggaaagatc ggatggttct cgagcagcgg cccgaagcgg
      901 tcgagcgcat aattgccgac gtcgtcctcg acccagaacg tcgcgtgcgg gttgcccatc
      961 gagaccgccg acggcgtatg cagcaccggt gcgtcgatcg gcccgatctg cagctcgatg
     1021 ccggtggtgt cgtagaattc ctcgctgagc gggatgtcct gccagccgaa ccgtggcttg
     1081 cccatgtcga cggtgatcgt cccgtcggcg tgctcctcgc cggtcaggat gccggcgagc
     1141 gtctcgaaca cgaagctctt ccggccggtt tcggcgctca gcgcctgcac cacgcagcgc
     1201 atgccattgc cgcaggcttc cgccagcgac ccgtcggaat tgaggatttc gatgtagtgg
     1261 gcggttccgg cagtgcgcgg atcgtggatc gccatgatct ggtcgtagcg cgtcgccggg
     1321 tcggcgttca gcgccaccgc cgcctgcggc gtcacccggt cggcgcggcc gcgcatgtcg
     1381 gcaacgatga tctcgttgcc caacccgttc atcttgagga aatgcgcctc gctcatggct
     1441 ggcctatatg gcggaactgc cgcccaattg ccagtgccag cggcggcctg ccgcgcccgc
     1501 ccggccgctg gcgcccgcca ttgcctaacg gcggggcttc ggtcaccatc ggcgccagtt
     1561 gaggagtcgg catggcgacg ctggcggatg cgagcgaagc aggcgcggcc cggtcgccgc
     1621 ggcggctcgg gctggtcgac cggctgggcg cctcggaccc cgccctttcg cggctccggc
     1681 tggcctcccg ggcgctgctc tcgtcgttgc tggtggcggc cgtgctcgcc ggcatcaccc
     1741 tgctccaccc cctgccgatc gccgcctacg gcctggcggt ggtgatcgcc ttcagcggca
     1801 gcatggcggt gcgcgacgcg accgcccgcg gccagctgac gacgcggttt tacgcgttca
     1861 ttgccgccgt cgtgctcgcc gccgtggccg gcgtgctcgc cagcctgccc gtcgtcgccg
     1921 acctcgcctt cctcgcggtg atcttcggcg ccgtctatgt ccgtgcctac ggccagcgct
     1981 ggttcgccat cgggctgctc gccgtcatgg cctatttcat gggcgattac atgcggccgc
     2041 agcccgccga catcggctgg ctggcgctcg ccgccgccat cgccttcgcc gcgacgcacc
     2101 tgaccaccgt ctacattctc cgcgacgatc ccgagcgcga cttccgccgg gccctgcgca
     2161 ccctcgacca gcgcctcgcg ctcattgtcg gcgcgctggg cggcgccggc cacgcgcccg
     2221 gtcccctcga tcgccgcccg ttccagcagc agctggcgca gttccgcgag atcgtgctga
     2281 tggccgaggg cttcatcccg cagggcgaga aaggctcgct ggccgccgcc ggcgccgcct
     2341 ccgatcttgc cgtggcgctg ttcgacctgc agctggtggt cgagcggctg gtgcgggcga
     2401 gctacatcgc actcccgccc cccgagctgc cgggcctggc gctggcgcac gacactgccg
     2461 gcctccggcg ggccgcgcag gccgggccgg ccgagggacc cgccgccgtc accgcgggcc
     2521 tgctcctgcg gctcgatctt gcccgcaccc ggctcggcac ggcgctcggc agcgccccgt
     2581 cgccggcctt ccgcctgccg ccgccaagcc cggcggcagc gcctgccgcc acgcccgcga
     2641 ccggcccgcg gccgttgatc ccgctggccc tgcagctgcc gatccaggtg acgctggcct
     2701 gcgccattgc catggctggc gggctgctgc tgtcgccggt ccgctggtac tgggcggtgc
     2761 tcactgcctt catcgtcttc aacaacgcca ggtcgcgcgc cgacacggca ttgcgggccc
     2821 tgcagcgctc cggcggcacc ttcgccggcc ttatcggcgg gaccctcctg gcgacgctgc
     2881 tccacggcca gctggtcgcc tcggcgatcg gcatccccat cctgttcttt ctcgccttct
     2941 atttcgtcca ggcctcctac ggggtgatga tcttcttcgt caccctggcg ctggccctgc
     3001 tctatggcgt gatgggcagc ttcacgccgg aactgctggt gctgcggctg ggcgaaaccg
     3061 tgatcggcgc cctcgccggc gtgctcaccg ccttcgtcat cttcccggcc cgcgcctcgc
     3121 tcaccgccgg cgcagcgctc gacaaatacc tcggcgccct tgccgacctg cttgctgccg
     3181 ccggccgccg cgcccatggc gagcccgagc cgcagcacct gctcgcccgc tcgcggctgc
     3241 tcgatcgcgc ctacaccgag ctggccgcgg ccgtccgtcc gctcggcggc ccgtggagcg
     3301 ccgtcacccg cttcggcgaa gtgcgcgagc ggctgctgct gctcaccggc tgcgcccatt
     3361 ggggccgcgt gctggcccgc agcctgcggc cgggcgagcc gctgccgccg gcgagcctcg
     3421 agcggctgga cgcactgctg gccgaggtct cggcccgcat cggcgccgcc ggcgccattc
     3481 gcgagacctt cttcgagcgg ccgcatttgc ccgacggcgc cgtcaccgcc gccacgcccc
     3541 gcccgccggt gccgatcagc gccgacgagg atcccgcgtt cgccctcacc gtgatcgccg
     3601 cgctgctcga tcgcgccacc ctcgcggcgg ttcccgcggg cgcggccgat gccggcccgg
     3661 cgccggcgct tccttgactc gcgggcgttt cctctctacg acccgccgca ctatccgtca
     3721 ggcccaaacc tgatcggccg gccgggaccc gcaaaggtat aaagagttcc cggtggccag
     3781 cacccgacag cgcgatgcgc cctcgggtgc gtttggcgtt tgcgccggcg gaccctatct
     3841 ccgggcggga cccatcccgc agcggaacca gaggacgagc atgttcgaaa gcctgagcga
     3901 ccggcttggc aagatcttcg acggcctgac cggccgcggt gccctcagcc ccgccgacgt
     3961 cgacgccgcg ctgcgcgaag tgcgccgggc gctgctcgag gccgacgtct cgctcgaggt
     4021 ggtcaaggcc ttcgtcgacc aggtgcgcga gcgcgccgtc ggcgccgagg tcacccgcgc
     4081 cgtcaagccc ggccagcagg tcatcaagat cgtccacgac gaactggtga aggtgctggg
     4141 caccaccccg gtgccgctcg acttcaacgc caccccgccg gtcgccatcc tgatggtcgg
     4201 cctgcagggc tcgggcaaga ccaccaccac cgccaagatc gccaagcgcc tgaaggagcg
     4261 gcagggcaag aaagtgctgc ttgcctccct cgacacccgc cgtccggcgg ccatggagca
     4321 gctgcgggtg ctcggcgaac aggttggcgt cgacacgctg ccgatcgtca ccacggaaac
     4381 gccggtccag atcgcccgcc gggcgctcgg cgaaggccgc ctcggcggct acgacgtgct
     4441 gatcctcgat accgccggcc ggacccacat cgacgaagag ctgatggccg agaccgccga
     4501 gatcaaggcg gtcaccaacc cgcacgagat cctgctcgtc gccgacgcgc tgaccggcca
     4561 ggatgccgtc aacctcgccc gctccttcga cgcccgcgtc gacatctccg gcatcgtcct
     4621 cacccgcgtc gacggcgacg gccgcggcgg cgccgcgctc agcatgcgcg ccgccaccgg
     4681 caagccgatc aagctgatcg ccaccggcga aaagctcgac gccctcgagg acttccgccc
     4741 cgcctcgatc gccgaccgca tcctcggcat gggcgatatc gtctccctgg tcgaaaaggc
     4801 cgcccagacc gtctccgccg aagacgccgc gcggatggca aagaagctca ggaagggcag
     4861 cttcgacctc gaggacctgc gcgcccagct gctgcagatg aagaagatgg gcggcgtcgg
     4921 cgccctgatg ggcctgatgc ccggcatggg ccagctcaag aaagccatga acggcgccaa
     4981 tgtcgacgag aaggtcttcg atcgccaggt ggccatcatc aattcgatga cccgggccga
     5041 gcgcgccgac cccgacctgc tcaacgccag gcgccgcatc cgcatcgccg gcggctccgg
     5101 cacccgggtc gaggacgtca acaagctgat gaagcagcac cgccagatgg cggacatgat
     5161 gaagaaggta tcgaagggcg gcatgggcgc gctgagcggc atgttcggcg gcaaggccgg
     5221 ccagatgatg cccggcctcg gcagcatgga tccctcgaag atggaccctg cccagctcga
     5281 gcagatggcg cggcagatgg gcatcgaccc cgccgccatc cagcaggcgg ccggcgccgc
     5341 ccagcccccc gccgatatcg cccagaagct gcccgccgac gtcggccagc tgctcaaatc
     5401 cggatcgggc ctgcccggtc ttggcggcgc gtcgcgcttc cccggccttc ccggcctcgg
     5461 cggcggctac gtgccgaaga agaaatagaa ccctatccta tccatccagc caaggaccgc
     5521 accgatgtct ctgaaacttc gcctcgcccg cgccggcacc accaagcgcc cctactacca
     5581 cgtcgtcgtc gccgatgccc gctcgccccg cgacggccgc ttcatcgaaa agctcggcac
     5641 ctatgacccg atgctgagcg acgagaccaa gcgcgtgacc ctcgtcgccg agcgcatcca
     5701 gcattggctg ggcgtcggcg cccagcccac cgaccgcgtg ctgcgcttcc tcgacgccgc
     5761 cggcctcctg aagcgcgccg cgcgcaacaa tcccgagcgc gccaagcccg gcaagaaggc
     5821 cactgagcgc accgaggcgc gggccaaggc cgccgccgac aagaccgcgg ccgccgaagc
     5881 cccggcggcg gagtaagatg gtcgacacct ccaggcgact gctgatgggc cgcgtcggtg
     5941 cggcccacgg cgtgcgcggc gaggtgcgca tccagtcctt caccgaggag ccgctggcgc
     6001 tcgcctccta cgggccgctc ggcaccgacc ggcccggtct caccatcgag atcgaagctg
     6061 cccgcgccac caccaacgtg ctggtggcgc ggctgaaggg cgtcactgac cgcagcgcgg
     6121 cggaaaagct caacggcgtc gagctctatg tctcccgcga ccgcctgccg ccgcccgcgg
     6181 cggacgacga tttctaccat gccgacctgc tcggtctcga ggcccggctc ggcgacggca
     6241 cggtgctcgg caaggtcagc gccatcccca atttcggcgc cggcgacctc ctcgaggtga
     6301 ccgacgcgcg caccggcgac acctacctct atccgttcac ccgcgccgtc gtgcccgagg
     6361 tgcggatggc cgacggctac ctgctgatcg aggtgcccgt cgatgccgat ccgggcgagg
     6421 aagagcccga ttgagcttcg ctgccgacat cgtcacgctg ttcccggagc tgtttcccgg
     6481 cccgctcggc gcctcggtga tcggccgcgg cgcggcgcag ggcctgtggt cgctgcggct
     6541 cacgcaattg cgcgatttcg ccaccgaccg gcaccgctcc gtcgatgaca ccccggctgg
     6601 tggcggcgcc ggcatggtgc tgcggcccga tgtcctcgcc gccgccatcg acagcgttgc
     6661 cggccagaac gacccgcggc cgcgcctgct gctctcgccc cgcggcgcac ggctgaccca
     6721 ggcccgcgcc cgggcgctcg ccgccgggcc cggcatcgtc ctcgtctgcg gccgcttcga
     6781 gggcgtcgac gagcgcatca tcgaggcccg caacctcgag gagatctcga tcggcgacta
     6841 cgtgctcgcc ggcggcgaag tcgccgccat ggtgctgctc gaggccgtcg tgcggctcat
     6901 tcccggcgtg ctcggagcgg acgaatcgat cgccaccgaa agcttcgaga acggcgttct
     6961 tgagtatccg caatacaccc ggccgcagct cttcgagggc cgcgacatcc cgccggtgct
     7021 cacctccggc gatcacggca aggtggcgcg ctggcggcgc gaggcggccg aaaagctgac
     7081 ccgcacccgc cggcccgacc tgctcggcta gcgctacacc ggatcgaacg tcgcaaaggc
     7141 gctgaccagc ccgatcacca ccaccccgat cgccagctcc gccaccgtgc cgagcaccag
     7201 gccgcggctg gcccgcggcg cgccggatgg cagctgcggc gtgaacacat agcggttggc
     7261 gaccgcgatg ccgaccatca gcgccaccag cccgatcttg atggcgagca gcagttggta
     7321 gggcgaggct gggtcgagcg gcgcccggcc cagcgtcagc gccgtgttga cgatcccggt
     7381 gaccagcacc accgccaccg cgacgtgccc gaagcccgag aaccgggcga gggcgatggc
     7441 cgcatcgtcg cggctcgccg cctgccgcaa cgccagcagg caggcgagca gcggcaccag
     7501 gcttccgacc cagaagccgg cgctgatcag gtgcagcgcg tggttgagcc ggtgcgccca
     7561 gccgagggcg ccatcctgca tcgcggcatg cccgacgaag ccgaggctcg ccagcaccgc
     7621 cgcgcttccc gcgatcagca gcccgcgtcg cgtcggcccg cggagcagca cggcgacgat
     7681 gaggatcgca aggatcgcga gatgccacat ccacgccgcg ccgaacgcgg tccccgtcgc
     7741 gaggccgtcc cagacgccgg gattgaccac gtcgctccag ccatcgccgg cttccccggc
     7801 ctcgagcccg aaccaggcaa gcccggtgag gacgagcacc cccaccagcc cggcgctgac
     7861 ccggccgccg aggccggcga ggcgcggccg cagcccgtcc ggcaccagcg ctccatcgaa
     7921 gacgctgatg ccgaacagca gcattgccgc cgagaaatgc gcgaagcggc aggcgacgaa
     7981 gatcgcgtcc acggctgcta cttcaccgtg aacccatagc tgccgctggt cttgtggcca
     8041 tcggtcgaca gcgcgtgcca ggccaccgtg taggggcccg gcggcagcgc cgtcgcgagc
     8101 ggcacgacca gcacggtgcc gtcgctgccc tcgaggtgcg cggcgccgag cgccaccgcc
     8161 ccgcccggcc cggtgagcgt gatcccggtg aagctgagcg cgacgccttc ggaaaagctc
     8221 agcgtcagcg ccgtcggcgc cacggcgacg atcgccgcat tggccggcac ggcggtgatg
     8281 agatgcgcgt gtgccagcgc cgggctggcg gcgagaagga ggaaagcggt ggtgatgagc
     8341 gtggttttca tgtggcgcat ggctacatcc ccatcgacat cgaggacatg tccatgccgc
     8401 cggacggcat gaccgaaacg ccgccgctgg ccgccggcgc cgttgcctgc cccatgctgc
     8461 cgacgttgaa ctcgaccggg atgtcgccgg ccgtggcgaa gtggagcgtc attgcaacgc
     8521 aatccccctg gacgaacggc gccgccatgc cggtgagcat caggtggtag ccgaacggat
     8581 cgagccgcag cgagccgccg ggcgggatcg gcagcccgcc gctcacgtcc gacatctcca
     8641 tcacattgcc gttcatcttc atctggtgga gctcgacgct gtcggcggcg gggctgctgg
     8701 cgccggtgaa gatgtcggca ctggccccgg tgttgctgat ggtgagatag ccgccggccg
     8761 attgcgcccc cttgggggtg gcgcgcagga acgcgccgct gacggtgatc ggcccggcgc
     8821 tgaagctctg gccggccggg cagccggcga cgatgccgct ggcggcgagc gcagccgtgg
     8881 ggactgcggc aagcaggaac gccgcgggcg cggcgaagcg aagaacagtc atgatctgac
     8941 ctcgaaaaag ggaaatgcgg caggccggga ggtcaggcgg ccggcggtcc ccgcggcagg
     9001 gccgcgagcg tccgtccggt cgcggccatg gctggcacga ggtcggcata ggcgacgggc
     9061 tgcgccgtga aacagacggc ggaggggacg gccggtacgg gcggcagcag cggtacgttc
     9121 ggacgacagg cgtggcaggc catgtggctg ccatcgtcgc cgccgctcag cggatcgccg
     9181 cagatcggcg cggcgactcc ggcgacggtc gcggtcccac cggcgaacgc catgctggcg
     9241 gcgccgaaat tgaggaacgc gagcgccaag acgaggagcg cgagcagcag ctcgcgaaca
     9301 accagtcggc ggacgctttc ggccggacgc atgcagggct tatagcaggc gccaggccgt
     9361 ccgcacccgg caaaaccgcc gcagactgga cttggcgccc gttctcctct ataggcccgc
     9421 tcgccggggc tttgcctggg ccaataacgt cacacaactc cgtgcaaaca agaccgggcg
     9481 gctggagagc aactccagca aaacgcccca ttgaaaagat cagaacggat ccgaaatgcc
     9541 caatatcatt gccgagctcg acaaagagca gcacgacgcg ctggcggcgc gatccagcca
     9601 tcccgatttc acccatggcg acaccgtcaa ggtgtgggtc aaggtgcgcg aaggtgaaaa
     9661 agagcgcctg caggcttacg aaggcgtggt catcgcccgc ctcggccacg gcctcaacga
     9721 gagcttcacc gtccgcaaga tttcctacgg cgaaggcgtc gagcgcgtct ttccggtgct
     9781 gagccccaac atcgaccgca tcgaagtgct gaagcgcggc aaggtgcgtc gcgccaagct
     9841 ctattacctg cgcgatcgcc gcggcaaatc cgcccgcatc ttcgaatcga ccaacgcccg
     9901 tacccgcaag atcgaggccg gcgagcgcga tgccgcgctc gaggccaaga gcgcccgcga
     9961 ggccgaaaag gtcgccgcgg ccgaggccct ggcccgcgag ctggcggaaa aggaagccgc
    10021 cgaggccgcc gccaaggccg aatagctccc gattaatctc cggttcagtc aaacccggct
    10081 ctgatgagcc gggtttttca ttccggggag ggggccttgg gaacaccgga cagccgcgcc
    10141 gcggccgcgc aggccttgcg cgacgaagcg cgtgccttcc tgtcgcagac cgggctcttc
    10201 gccctgctgc aggcgcagtt cggcgacccg acggtgaccg gcagcgccgg ctacgatctc
    10261 atggtctggc gcgacatcga catccacctg ccgctggagc cggaacgctg gcccgaatgg
    10321 atggcctttg gcggccgcct tgccgagctc ttcgatgcca tcggcctcgg cctccacaag
    10381 gcgagctacc tcaacgccta tgtcgagccg catccgcaag gcgcggggct gtgctggagc
    10441 ctcgacgcca gggattttgc cggcaatccc tggcaggtcg acatctgggg ctgggacccg
    10501 ttcgactacg ccgtccgcca ggcccgcgac ttctcgctgc gcaccgatct gcgcgccgcc
    10561 gaccgcgacc tgatcctgcg gctgaagacc gaggcgcggg cccgcgacaa ctaccatggc
    10621 gtgaaagtat cgagctggga catctaccgg ttcgccatcg cccgggccgg cgacagcctc
    10681 ggggcgctgg agcagtggaa gcggacgcag taggctcggc tg
//
LOCUS       DATAZA010000182         2293 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3269274, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000182 DATAZA010000000
VERSION     DATAZA010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2293
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3269274"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..612
                     /locus_tag="VHZ56_04705"
     CDS             <1..612
                     /locus_tag="VHZ56_04705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HEX4297301.1"
                     /translation="PDQIAYLAGEYAVVHSNGTAKAEVISDRQYQIVVTKSDAIEKAI
                     KECDTCQLLSEDNGPFGEVPQRTPSLTNSLLQKYGKDLQYMLTFNDVYFDFVVPTLKS
                     AGIDPGSPPFLISAGDGSESAYQRIRTGQFQIATVPEPAYMHGWQLIDELNRAFNNQP
                     PSGYVTKVHLVTKDNIDADGGKDNRYDPQNGYQDQYKKIWGVS"
     gene            679..1050
                     /locus_tag="VHZ56_04710"
     CDS             679..1050
                     /locus_tag="VHZ56_04710"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX4297302.1"
                     /translation="MTEPIVYPAADKPSHRIRPDLLGTVIPAEHGTLVRWAVPAHQPE
                     TPLHSHIEFEQITVILEGRIRTRVGDEYFVLGPGDLVRIARGAMHGNTTALGDADAVV
                     LDIFMPPRAQYVEAARIETAP"
     gene            1047..>2293
                     /locus_tag="VHZ56_04715"
     CDS             1047..>2293
                     /locus_tag="VHZ56_04715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297303.1"
                     /translation="MTSLVPESARNFRFIGYSDMAGKADGTQVMINKGHAFVCNPFSG
                     GVTVLDVKDPRAPRVVNFLPVHRRSWSIHLQSFGDLLLVIEEFNFYSIFNEGSSYYDA
                     STEGMDSSRFGKHGEDFSAGLRVYDIKDPANPRPIGFMEVEGLGLHRLWWTGGRYAYA
                     SAFLDGFTDHILIVIDMADPARPRECGRWWLPGMNKAAGETASWPGRVALHHAIVADG
                     TAYAAWRDGGFTSLDVSDPGNIKLIARRNWYPPYGGGTHTCLPLPDRGLLVVADEAVR
                     DIDVEGIKHTWIFDIRVPENPISIATVPVPSDQDYVKKGGHFGPHNLWENRPDAYRSS
                     RYLFETYQNAGLRVFDLGNPYRPEEIAHIVPPAPAFSMDARAPNVRQVLHSADLYVEP
                     NGLVYITDFNAGLYIAEWTGGTGV"
BASE COUNT          418 a          848 c          665 g          362 t
ORIGIN      
        1 cccgaccaga tcgcctacct cgccggcgaa tatgccgtgg tccactccaa cggcaccgcc
       61 aaggccgagg tgatctccga ccgccagtac cagatcgtcg tcaccaaatc cgacgccatc
      121 gagaaggcga tcaaggagtg cgacacctgc cagctgctga gcgaggacaa cggtccgttc
      181 ggcgaagtgc cgcagcgcac cccctcgctc accaactccc tgctgcagaa gtacggcaag
      241 gacctgcagt acatgctgac cttcaatgac gtatacttcg acttcgtcgt gccgacgctg
      301 aaatcggccg gcatcgatcc gggcagcccg ccgttcctga tctcggccgg cgatggttcg
      361 gagagcgcct accagcgcat ccgcaccggc cagttccaga tcgccacggt gccggagccg
      421 gcctacatgc acggctggca gctgatcgac gagctgaacc gggcattcaa caaccagccc
      481 ccgtcgggct atgtcaccaa ggtgcacctc gtcaccaagg acaacatcga cgccgacggc
      541 ggcaaggaca accgctacga tccgcagaac ggctaccagg accagtacaa gaagatctgg
      601 ggcgtgtcat aatcctcggc tgaaacgacc cggcggcctg cttctcccgg ccgccgggcc
      661 atccagcgag gacatccctt gaccgagccg atcgtctacc cggccgccga caagcccagc
      721 caccggatcc gtccggacct gctgggcacc gtcatcccgg ccgaacatgg aactttggtg
      781 cgctgggccg tcccggcgca ccagcctgaa acgccgctcc acagccacat cgagttcgag
      841 cagatcaccg tgattcttga aggccgcatc cgcactcgcg tcggcgacga gtatttcgtc
      901 ctcggccccg gcgatctcgt gcgcatcgcg cgcggcgcca tgcacggcaa caccaccgcg
      961 ctgggcgacg ccgacgccgt cgtcctcgac atcttcatgc cgccgcgtgc gcagtacgtc
     1021 gaggccgccc gcatcgagac cgcgccatga ccagcctcgt tcccgaaagc gcccgcaatt
     1081 ttcgcttcat cggctattcc gacatggccg gcaaggccga cggcacgcag gtgatgatca
     1141 acaagggcca cgccttcgtc tgcaacccgt tctcgggcgg cgtcaccgtg ctcgacgtca
     1201 aggacccccg cgcgccacgg gtggtgaact tcctgccggt gcatcgccgc agctggtcca
     1261 tccacctgca aagcttcggc gacctgctgc tggtgatcga ggagttcaac ttctactcga
     1321 tcttcaacga gggctcctcc tactacgacg cctcgaccga gggcatggat tcgagccgct
     1381 tcggcaagca cggcgaggat ttttccgccg gcctgcgagt ctatgacatc aaggatccgg
     1441 ccaatcccag gcccatcggc ttcatggagg tcgagggcct cggcctgcat cgcctgtggt
     1501 ggaccggcgg ccgctatgcc tacgcgtcgg ccttcctcga cggcttcacc gatcacatcc
     1561 tgatcgtcat cgacatggcg gatccggccc ggccgcgcga atgcggccgc tggtggctgc
     1621 ccggcatgaa caaggccgcc ggcgaaaccg ccagctggcc cggccgcgtc gcgctccacc
     1681 acgccatcgt cgccgatggc accgcctacg ccgcctggcg cgacggcggc ttcacctcgc
     1741 tcgacgtgtc cgatcccggc aacatcaagc tgatcgcccg ccgcaactgg tatccgccgt
     1801 acggcggcgg cacccacacc tgcctgccgc tccccgaccg cggcctgctg gtcgtcgccg
     1861 acgaggcggt acgcgacatc gatgtcgagg gcatcaagca cacctggatt ttcgacatcc
     1921 gcgtgcccga gaacccgatc agcatcgcca cggttcccgt cccgtcggac caggactacg
     1981 tcaagaaggg cggccatttc ggtccacaca atctgtggga gaaccggccc gacgcctatc
     2041 gcagctcgcg ctacctgttc gagacttacc agaacgccgg cctgcgcgtg ttcgacctcg
     2101 gcaacccgta ccggccggaa gaaatcgccc acatcgtgcc accggcgccg gccttctcga
     2161 tggacgcgcg cgcgcccaac gtcaggcagg tcctgcactc ggccgacctt tacgtcgagc
     2221 cgaacgggct ggtctacatc accgacttca acgccggact ctacatcgcc gaatggaccg
     2281 gcggcacggg ggt
//
LOCUS       DATAZA010000183         1753 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3965476, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000183 DATAZA010000000
VERSION     DATAZA010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1753
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3965476"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..558
                     /locus_tag="VHZ56_04720"
     CDS             <1..558
                     /locus_tag="VHZ56_04720"
                     /inference="COORDINATES: protein motif:HMM:NF013183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-binding protein"
                     /protein_id="HEX4297304.1"
                     /translation="IVPDDRKALEKSILGAFDYGVDVLVTSGGASVGERDYVRDALRD
                     LGVTLDFWKILMRPGKPLMFGTRGKTLVFGLPGNPTSAFVTAVVLVRPALRLMTGHTD
                     PFFPFMGVPLAADLPPNGARRHFVRGTLSRNEIGFLEVLPIAETDSNHSSSLAEADAL
                     IIQPEDSPGIPAGEIVEIIPLNMLG"
     gene            653..1378
                     /gene="lexA"
                     /locus_tag="VHZ56_04725"
     CDS             653..1378
                     /gene="lexA"
                     /locus_tag="VHZ56_04725"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010659992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HEX4297305.1"
                     /translation="MLTRKQHELLMFIHERMKESGIPPSFDEMKDALDLRSKSGIHRL
                     ITALEERGFIRRLPNRARALEVIKLPDSMNPSLGGRKSRFEPSVIDGNLGRIAAPPTR
                     AVPQMPGMSDAGRPVTIPVMGRIAAGTPIAAIETQSHTIVVPPEMLGGGDHFALEVRG
                     DSMIEAGIFDGDTVVIRKQDTAATGEIIVALVDDEEATLKRLRRRGNSVALEAANPAY
                     ETRIFPPDRVKVQGRLVGLLRKY"
     gene            1452..>1753
                     /locus_tag="VHZ56_04730"
     CDS             1452..>1753
                     /locus_tag="VHZ56_04730"
                     /inference="COORDINATES: protein motif:HMM:NF016894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008671 - 2-dehydro-3-deoxygalactonokinase
                     activity [Evidence IEA];
                     GO_process: GO:0034194 - D-galactonate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxygalactonokinase"
                     /protein_id="HEX4297306.1"
                     /translation="MAETQWVAVDWGTSNVRAWGIAADGSQTFAASSDKGMGKIARAD
                     YPGVLDTLVGDRLGGVAAPIDVVVCGMAGARQGWMEAPYLDAPANLNALSHGAVRP"
BASE COUNT          287 a          623 c          571 g          272 t
ORIGIN      
        1 atcgtgcccg acgatcgcaa ggcgctggaa aagtccatcc tcggtgcctt cgactacggc
       61 gtcgacgtgc tggtgacttc gggcggcgcc agcgtcggcg aacgcgacta tgtgcgcgac
      121 gcgctgcgcg acctcggcgt caccctcgac ttctggaaga tcctgatgcg cccgggcaag
      181 ccgctgatgt tcggcacccg cggcaagacc ctggtgttcg gcctccccgg caatccgacc
      241 tcggccttcg tgaccgcggt cgtcctggtg cgtcccgcgc tccggctgat gaccggccac
      301 accgatccgt tctttccgtt catgggcgtg ccgctcgccg ccgacctgcc gcccaatggc
      361 gcgcggcggc acttcgtgcg cggcacgctg agccgcaacg agatcggctt cctcgaggtg
      421 ctgccgatcg ccgagaccga cagcaatcac tcctcctcgc tcgccgaggc cgacgcgctg
      481 atcatccagc ccgaagacag ccccggcatt ccggccggcg agatcgtcga gatcatcccg
      541 ctcaacatgc tcggctgacg ccttaagcgg aaatttaccg cactgttgca gaacagagcc
      601 ggaacaccta tagatcgttc agcctttgtt ctgattcccg ggagggcgcc gaatgctcac
      661 gcgcaagcag cacgaacttc tcatgttcat ccatgaacgc atgaaggaga gcggcattcc
      721 accctccttc gacgagatga aggacgcgct cgacctgcgc agcaaatccg gcatccaccg
      781 gctgatcacg gcgctcgagg aacgcggctt catccgccgc ctgcccaacc gggcccgggc
      841 cctggaagtg atcaagctgc cagactcgat gaacccctcg ctcggtggcc gcaaatcgcg
      901 gttcgagccc agcgtcatcg acggcaatct cggccgcatc gccgccccgc caacgcgtgc
      961 cgtgccgcag atgccgggca tgtccgacgc gggacggccc gtcaccatcc cggtcatggg
     1021 gcggattgcc gccggcacgc ccatcgcggc catcgagacg cagagccaca ccatcgtcgt
     1081 gccgcccgag atgctgggcg gcggcgacca cttcgctctc gaagtgcgcg gcgattcgat
     1141 gatcgaggcc ggcatcttcg acggtgacac ggtggtgatc cgcaagcagg acacggcggc
     1201 gacgggcgag atcatcgtgg cgctcgtcga cgacgaggag gcgacgctca agcgcctccg
     1261 ccgccgcggc aattcggtgg cactggaagc ggccaatccc gcctacgaaa cccgcatctt
     1321 cccgcccgat cgcgtcaagg tgcagggccg cctcgtgggg ctgctccgca agtactgagc
     1381 ggcgccgctt tccgctggct tttcgcggcc gcttgggtag ggtcgcgccg cgttcggcgg
     1441 agacaggcgc ggtggcagag acacagtggg tggcggtcga ctggggcacc tccaacgtgc
     1501 gcgcctgggg catcgccgcc gacggcagcc agacgttcgc cgcgagctcg gacaagggca
     1561 tgggcaagat cgcgcgcgcc gactatccgg gcgtgctcga caccctcgtc ggcgacaggc
     1621 tcggtggcgt ggccgcgccg atcgacgtcg tcgtctgcgg catggccggc gcccgtcagg
     1681 gctggatgga ggcgccatac ctcgacgcgc ccgcaaacct caatgcgctg agccacggcg
     1741 cagtgcggcc gga
//
LOCUS       DATAZA010000184         3741 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3269403, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000184 DATAZA010000000
VERSION     DATAZA010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3741
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3269403"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            45..1145
                     /locus_tag="VHZ56_04735"
     CDS             45..1145
                     /locus_tag="VHZ56_04735"
                     /inference="COORDINATES: protein motif:HMM:NF024785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEX4297307.1"
                     /translation="MAIKSASERRAAMIRLVESKTVVRVAPPLLLPASPYLDLAGEEF
                     GRQLLLTTANNGIDYCLRPDFTLPIAKSYLDEGMLGVPGAYTYFGPIFRQESGVPIEY
                     DQAGLELLGQPDASSALDQVLTFARWALAIYDVTAPNVRLGGVGLFESFLAAIGISAQ
                     WQARIRHRFGHPAAMDRLMSRLTSPDNRAAGATPDAHETIVEIVTDNMISAGLSLVGS
                     RAPDEIAERYIEKQALDAVPIPEEMVQLLVDYLAVTDTVGRALDRIRQLTGKAGIDLE
                     APLSKVRSHAAALAALSPKAEVLFDASFSPRLDYYTGVVFEMTGADGDILASGGEYDR
                     LMDRLGAPEQVTASGCALWTDRLEAEATRERG"
     gene            1132..1860
                     /gene="hisG"
                     /locus_tag="VHZ56_04740"
     CDS             1132..1860
                     /gene="hisG"
                     /locus_tag="VHZ56_04740"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020085673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEX4297308.1"
                     /translation="MSEDSLVLAVPSKGRLEEETRRVFGEQRLPIARPGGARSYVGSI
                     KNQPQVQVRFYPAAEIARELIMGAIDIGVTGSDLIHEAAENGEERVVFVKPLAFGHAD
                     VVVAVPDAWIDVTHMVDLADVASDFRLRHGRWLRVATKYVHLTRKFFAEWGIAEYRIV
                     ESAGATEAAPAAGTADLVVDITSTGETLGANALRVLEDGLVMKSEAHLIVSKGADWSP
                     LKKAQLEALLSQMGDIPPGTSTLL"
     gene            1905..3122
                     /locus_tag="VHZ56_04745"
     CDS             1905..3122
                     /locus_tag="VHZ56_04745"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX4297309.1"
                     /translation="MADFELTILMPCLNEAETLAVCIAKARGFCARTGIAGEVVVADN
                     GSTDGSQAIALAAGARVVPVATRGYGAALAAGIAAAQGRFVIMGDADDSYDFAHLDAF
                     VAALRAGNALVMGNRFRGGIAPGAMPWHHRYIGNPVLSFLGRLFFGTRASDFHCGLRG
                     FDRAAILGLNLRTTGMEFASEMLVKATLGGLRVAEVPTTLKKDGRGRPPHLRSFRDGW
                     RHLRFLLLFSPRWLFLYPGLALLAVGLFLGTLLIRGPVNVSPTIVLDLHSFLAAAMCI
                     LVGMQAVSFAVIGRRFASRYGFIPQSRTFDAVLESFTLERVLLVAVALIVVGLVALGW
                     GFAQWAARGFGPLPLSSTMRAMILAMTTLVAGLQLAMSAFMASMIDVPLSERRVAEVP
                     REDYMVRRLEDRR"
     gene            3122..>3741
                     /locus_tag="VHZ56_04750"
     CDS             3122..>3741
                     /locus_tag="VHZ56_04750"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HEX4297310.1"
                     /translation="MLLDPLTLLALGGAALVAGFVDAIAGGGGLIALPALLAAGVPPI
                     LALGTNKVQSVVGTAMAALTYWRKGFVSLPLLGLAIACTYAASFVGAFVVKQVDTTLL
                     SIAVPVMLIAIALYFLFAPRLTDDDRHARLSFNAFVPVMGAIVGFYDGLFGPGTGSFL
                     TMGFVALFGLGVTRAAGNTKILNLASNFGALTLFIPSGDIVWQVAAV"
BASE COUNT          506 a         1418 c         1183 g          634 t
ORIGIN      
        1 aaaatcccgg ccgtcgccaa aatgatcgag cggaccaaga gctgatggcc atcaagtccg
       61 ccagcgagcg ccgcgcggcg atgatccggc tggtcgagag caagaccgtc gtgcgcgtcg
      121 cgccgccgct gctgctgccg gccagcccct acctcgatct cgccggcgag gagttcggcc
      181 gccagctgct gctgaccacc gccaacaacg gcatcgacta ctgcctgcgc cccgatttca
      241 ccctgcccat cgccaagtcc tacctcgacg agggcatgct cggggtgccc ggcgcctaca
      301 cctatttcgg cccgatcttc cgccaggaga gcggcgttcc gatcgagtac gaccaggccg
      361 gtctcgagct gctcggccag cccgatgcgt catcggccct cgaccaggtg ctgaccttcg
      421 cccgctgggc cctcgccatc tacgacgtca ccgcgcccaa tgtccggctc ggcggcgtcg
      481 gcctgttcga atccttcctc gccgccatcg gcatctcggc gcagtggcag gcccgcatcc
      541 gccaccgctt cggccaccct gccgccatgg accggctgat gagccggctc accagtcccg
      601 acaaccgcgc cgccggcgcc acccccgacg cgcacgagac catcgtcgag atcgtcaccg
      661 acaacatgat ctcggccggc ctcagcctcg tcggctcgcg cgcccccgac gagatcgccg
      721 agcgctacat cgaaaagcag gcgctcgacg ccgtgcccat tcccgaggag atggtgcagc
      781 tcctggtcga ctacctcgcc gtcaccgaca ccgtcggccg cgccctcgac cgcatccggc
      841 agctcaccgg caaggccggc atcgatctcg aggcgccgct gagcaaggtg cgcagccacg
      901 ccgccgcgct cgccgcgctg tcgcccaagg ccgaagtgct gttcgacgcc agcttctcgc
      961 cgcgcctcga ctactacacc ggcgtggtgt tcgaaatgac cggcgccgat ggcgacatcc
     1021 tcgcctccgg cggcgaatac gaccggctga tggaccggct gggggcgccc gagcaggtaa
     1081 ccgcctccgg ttgtgcgctg tggaccgacc ggctcgaagc ggaggcgacc cgtgagcgag
     1141 gatagcctgg ttctcgccgt gccctccaag ggccggctcg aggaggaaac gcgccgcgtc
     1201 ttcggcgagc agcgcctgcc catcgcgcgg ccgggcggcg cccgctccta tgtcggctcg
     1261 atcaagaacc agccgcaggt gcaggtgcgc ttctacccgg cggccgagat cgcccgcgag
     1321 ctgatcatgg gcgccatcga catcggcgtc accggctccg acctcatcca cgaagccgcc
     1381 gagaacggcg aggagcgggt ggtcttcgtc aagccgctgg ccttcggcca tgccgacgtg
     1441 gtggtcgccg tgcccgacgc ctggatcgac gtcacccaca tggtcgacct cgccgacgtc
     1501 gcctccgact tccggctgcg ccacggccgc tggctgcggg tcgcgacgaa gtacgtgcac
     1561 ctgacgcgga aattcttcgc cgaatggggc atcgccgagt accgcatcgt cgagagtgcc
     1621 ggggccaccg aagcggcccc cgccgccggc accgccgacc tcgtggtcga catcacctcg
     1681 accggcgaga ccctcggcgc caacgccctg cgcgtgctcg aggacgggct ggtgatgaag
     1741 agcgaggccc acctgatcgt cagcaagggc gccgactgga gcccgctcaa gaaggcccag
     1801 ctcgaggccc tgctgtcgca gatgggcgac attccgccgg gcaccagcac gctgctttaa
     1861 gcaatagcgc ctataaagcg gccagttccc tccgggcgat tcgcttggcc gatttcgagc
     1921 tcaccatcct gatgccgtgc ctcaacgagg ccgaaaccct cgccgtgtgc atcgccaagg
     1981 cccgcggctt ttgcgcccgc accggcatcg ccggcgaagt ggtggtcgcc gacaacggtt
     2041 ccaccgacgg cagccaggcg atcgccctcg ccgccggggc ccgcgtcgtg ccggtcgcca
     2101 cccgcggcta tggcgcggcg ctcgccgccg gcatcgcggc ggcgcagggc cgcttcgtca
     2161 tcatgggcga cgccgacgac agctacgatt ttgcccatct cgacgccttc gtcgcggcgc
     2221 tgcgggccgg caatgcgctg gtcatgggca accgcttcag gggcggcatc gcccccggcg
     2281 ccatgccgtg gcaccatcgc tacatcggca atccggtgct gagcttcctc ggccggctgt
     2341 tcttcggcac ccgggcttcg gatttccact gcggccttcg cggcttcgat cgggccgcca
     2401 tcctcggcct caacctgcgc accactggaa tggagttcgc ctccgagatg ctggtcaagg
     2461 cgacgctcgg tggcctgcgc gtcgccgagg ttcccactac cctcaagaaa gacggccgcg
     2521 gccggccgcc gcatctgcgc tcgttccgcg atggctggcg tcacctgcgc tttctgctgc
     2581 tgttctcgcc gcgctggctg ttcctctatc ccgggctggc gctgctggcg gtcgggctgt
     2641 tcctcggcac gctgctgatc cgcggcccgg tgaacgtctc gcctactatc gtcctcgatc
     2701 tccacagctt cctcgccgcc gccatgtgca tcctcgtcgg catgcaggcg gtcagcttcg
     2761 ccgtcatcgg ccgccgcttc gcctcgcgct atggcttcat cccgcagtcg cggacctttg
     2821 acgcggtgct cgaatccttc accctcgagc gcgtgctgct cgttgccgtg gcgctgatcg
     2881 tcgtcggtct cgtcgccctc ggctggggct ttgcgcaatg ggccgcgcgc ggcttcgggc
     2941 cgctgccgct cagttccacc atgcgcgcca tgatcctcgc catgaccacg ctggttgccg
     3001 gcctgcagct cgcgatgtcc gccttcatgg cctcgatgat cgacgtcccg ctcagcgagc
     3061 gccgtgtcgc cgaggtgccg cgcgaggact acatggtacg ccgcctcgag gaccgccgct
     3121 gatgctgctc gatccactga ccctgctggc gctgggggga gccgcgctgg ttgccggttt
     3181 cgtcgatgcc atcgccggcg gcggcggcct gatcgcgctg ccggcgctgc tcgccgcggg
     3241 cgtgccgccg atcctcgcgc tcggcaccaa caaggtgcaa tcggtagtcg gcacggcgat
     3301 ggcggcgctc acctactggc gcaagggctt cgtctcgctg ccgctgctcg gcctcgccat
     3361 cgcctgcacc tacgccgcct cgttcgtcgg cgccttcgtc gtcaagcagg tggacacgac
     3421 gctgctctcg atcgccgtgc cggtgatgct gatcgccatc gcgctgtatt tcctgttcgc
     3481 gccgcgcctc accgatgacg accgtcacgc ccgcctgtcg ttcaacgcct tcgtgccggt
     3541 gatgggcgcg atcgtcggct tctacgacgg cctgttcggg cccggcaccg gctcgttcct
     3601 caccatgggg ttcgtggcgc tgttcggcct cggcgtcacc cgcgccgccg gcaacaccaa
     3661 gatcctcaac ctcgcctcca atttcggcgc gctgacgctg ttcattccgt cgggcgacat
     3721 cgtctggcag gtggcggccg t
//
LOCUS       DATAZA010000185         4878 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2456605, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000185 DATAZA010000000
VERSION     DATAZA010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4878
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2456605"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            303..377
                     /locus_tag="VHZ56_04755"
     tRNA            303..377
                     /locus_tag="VHZ56_04755"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:335..337,aa:Lys,seq:ttt)
     gene            421..1407
                     /locus_tag="VHZ56_04760"
     CDS             421..1407
                     /locus_tag="VHZ56_04760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297311.1"
                     /translation="MAVINFVNASGHRGTLRHLLPALKVPTRRWSYERLVRQPRLPRG
                     TWIFTDHERLSAFETRVAASVAQQLRQAGCKVLNHPAEVRTRFGLLDALQAAGINAFR
                     AFRADESPVPSRFPVFIRWEYDHRGGRELIANQADLDAALGRERAEGVPLIGRLVIEC
                     ASEEASPGIWYRGSAYRVADAIIGHHLALDDKWLVKDGFDAARLDTYAHRDEFLARER
                     ALVVDAVYSDLLRRVFDIAGIEYGRADFGFVGDRLQIYEINTNPSHGAAADVFGNIHP
                     GREQTQRFSEQRLHEALEAISSDDAGSVPISGPLLASQRRLFPLLPTMMRRP"
     gene            1404..2363
                     /locus_tag="VHZ56_04765"
     CDS             1404..2363
                     /locus_tag="VHZ56_04765"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4297312.1"
                     /translation="MIELANEAGFDFGSAEYRAFFARFGLSPFQHPDWLQPFYRRLPV
                     AAGRRPLIVVGREARTGELGCVVPLLLDETGAKPQVTFAFLEVTDYACPVINPEVVGE
                     LSFSRALDRLVGDHTLEIAPLHHDHRATWSQLLGRPAEPLHFGSHAVAVQPVQDWRRR
                     SYGHNQLSGLRRKGRRLAELGDLRLDPVTGGAARAAIETAREFRIGRFPGDPLQIDPS
                     ASFYADVAASMDGLPRTFRLMCGQSVVAVMFGVVHLKRFHYLILACDYPNYARYSPGL
                     LIMDMAIEAWAEGGGDVFDFTIGDEPFKANFGCSRTPMYSIRA"
     gene            complement(2388..3176)
                     /locus_tag="VHZ56_04770"
     CDS             complement(2388..3176)
                     /locus_tag="VHZ56_04770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297313.1"
                     /translation="MAKASDQFRASDVSFWGVVALVACTVAVLGSTISALIPDDVLAS
                     LHASRLGGADLTQLRAELALLKGKSADLQQADTVLSQRFALAEQTAGAVTRRVGALEL
                     SVPRLLEAAAPASAPVVDTATVTGSTATPPPKTFAVDGGTVSVTETPLEPDADGGTAS
                     VQPMPQQLTDAAPDPAAFAVALGPPIDADEGVADWHGMNQKAGTLLLGLTPLLANVEG
                     GPGRRLVAGPLGTQAGARDLCGSIARLGIACATMPFVGQPLSGD"
     gene            3303..4667
                     /gene="glmU"
                     /locus_tag="VHZ56_04775"
     CDS             3303..4667
                     /gene="glmU"
                     /locus_tag="VHZ56_04775"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014764369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0006048 - UDP-N-acetylglucosamine
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEX4297314.1"
                     /translation="MAELVSIILAAGEGTRMRSTLPKILHPVGGLPIIGHVVRAAVDA
                     GSTQVAVITAPGHTAVRDMVGALYPQVQFFEQAERKGTAHAASMAKPLWEGAEGYVAV
                     VYGDHPMLREANFRLVTERLDAGMDAAILGFIPADPTGYGRFITDGEKLLAIREQKDA
                     SEDERKIGLCNACILVFRGPVFAELIGRVGTANAQGEYYVTDLVELANSAGYKVGYAV
                     APERDVMGVNDRSQLAKAEAQFQDLRRDDFMKAGVTLKDPATVHFSYDTAIGRDVTIW
                     PNVVFGPGVVIADNVEIRAFCDIEQASIGDGASIGPFARIRGGAELGRDVHLGNFVEV
                     KKSRIGAGTKAGHLSYLGDAVIGEKTNIGAGTITCNYDGVNKDITTIGNNVFIGSNTA
                     LVAPVTVGDGAYTASGSVITDDVPADAVAFGRARQENKPGYAPKLKQRALARKAAKAA
                     KGKS"
     gene            4667..>4878
                     /locus_tag="VHZ56_04780"
     CDS             4667..>4878
                     /locus_tag="VHZ56_04780"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008510617.1"
                     /note="Catalyzes the first step in hexosamine metabolism,
                     converting fructose-6P into glucosamine-6P using glutamine
                     as a nitrogen source; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HEX4297315.1"
                     /translation="MCGIVGIIGTEAVAPRLVDALRRLEYRGYDSAGVATLEHGSIAR
                     RRAEGKLGNLATKLGMEPLAGRIGIG"
BASE COUNT          795 a         1571 c         1746 g          766 t
ORIGIN      
        1 gtgcagggga cggcagcgaa cgaaggcaac gatgcttcga ccagggggct gctggcgcag
       61 taccaccggc tgaagaaatg acgcggcgcg ggcgggacat ggactcgtct gccatttcgt
      121 tggccagcgc gagagaccgg aaaaatcgcg ctgtttccct tgccgccgcg tccggttgac
      181 gcgcgccgta tcgagaacgt gaacgcgccg gggcgcgacc gggttgcgca ggaggcggtt
      241 gacagcgcag ggttcgccgc tatgttccgc cgccaactcc ccggctcccg cgggcgggtg
      301 atgtgccggt agctcagggg tagagcattc gacttttaat cgaatggtcg agggttcgaa
      361 tccctcccgg cataccagcc tccccccgcg gtcgattgca aacgttgcgt tggagcccgg
      421 ttggctgtga tcaatttcgt caacgcatcg ggccatcggg gcacattgag gcatctgctg
      481 ccggcgttga aagtgccgac gcgcaggtgg tcctacgagc ggctggtgcg gcagccgcgg
      541 ttgccgcgcg gcacctggat tttcaccgac catgaacgcc tgtcggcgtt cgagacgcgg
      601 gtcgccgcgt ctgtcgccca acaactgcgg caggccggat gcaaggtgct gaatcatccg
      661 gccgaggtga ggaccagatt cgggctgctc gacgcgctcc aggcggcggg catcaacgcg
      721 tttcgcgcat ttcgggccga tgaatcgccg gtacccagcc gcttcccggt gttcatccgc
      781 tgggaatacg accatcgtgg cggccgcgaa ctgatcgcga atcaggccga cctggatgcc
      841 gcgctcggcc gggagcgggc cgagggtgtg ccactcattg gtcgcctggt catcgagtgt
      901 gccagcgaag aggcgtcgcc cggcatctgg taccgcggct ccgcctaccg ggtcgccgac
      961 gccatcatcg gccatcacct tgcgctcgac gataaatggc tggtgaagga cggcttcgac
     1021 gcggcccggc tggataccta cgcgcatcgc gacgagttcc tggcgcggga acgcgccctg
     1081 gtggtggacg ccgtttattc cgaccttctc cgccgggtct tcgacatcgc cgggatcgag
     1141 tacgggcggg ccgatttcgg cttcgtgggc gaccgcctcc agatctacga gatcaacacc
     1201 aatccctccc acggcgcggc ggccgacgtg ttcggcaata tccatcccgg ccgggaacag
     1261 acgcagcggt tcagcgaaca gcggctgcac gaggcgctgg aggcgatcag cagcgacgac
     1321 gcgggttcgg tgccgatcag cgggccgttg ctggcatcgc agcgccggct gtttccgctg
     1381 ctgcccacga tgatgcggcg gccgtgatcg aactcgccaa cgaagccggg ttcgactttg
     1441 gctcggcgga ataccgcgcc ttctttgcgc gcttcggcct atcgccgttc cagcatcccg
     1501 actggctgca gccgttctat cgccggctgc cggtggccgc cgggcggagg ccgctgatcg
     1561 tcgtcggccg cgaggcccga accggcgagc tcggctgcgt cgttccgctg ctgctggacg
     1621 agactggcgc caagccccag gtgaccttcg ctttcctcga ggtgacggac tatgcctgtc
     1681 ccgtcatcaa tcccgaggtg gtcggggagc tatccttttc cagggcgctc gaccgcctgg
     1741 tcggcgatca cacgctggag atcgccccgc tccatcacga tcatcgcgcg acgtggtctc
     1801 agctgctcgg ccgacctgcc gaaccgctgc acttcgggtc gcatgccgtc gccgtccagc
     1861 cggtccagga ttggcggcga cggagctatg ggcacaacca gctgagcggg ctgcggagga
     1921 agggccgccg actggcggag ctgggggatt tgcgactgga tccggtgaca ggcggcgcgg
     1981 cccgcgcggc catcgagacc gcccgggagt tccgcatcgg gcgatttccg ggtgatcccc
     2041 tgcagataga cccgtcggca tcgttctacg ccgatgtggc agcaagcatg gacggcctgc
     2101 cgcgcacctt ccgcctgatg tgcgggcaga gcgtggtcgc tgtcatgttc ggggtcgtgc
     2161 acctcaaacg gtttcactac ctcatcctgg cgtgcgacta ccccaattac gcgaggtatt
     2221 cgcccgggct gctgatcatg gacatggcga tcgaggcgtg ggccgaggga ggtggcgacg
     2281 tcttcgattt cacgattggg gacgagccgt tcaaggccaa tttcggctgt agccgcacgc
     2341 cgatgtactc gatcagagcc taactgcgaa gccgcatagc attgcagtta gtcgccggac
     2401 agcggctggc cgacgaacgg catggtggcg caggcgatgc cgagcctggc gatgctgccg
     2461 cagaggtcgc gggcgccggc ctgggtgccg agcggcccgg cgacgaggcg cctgcccggt
     2521 ccgccctcga cattggcgag cagcggcgtc aggccgagca gcagggttcc ggccttctgg
     2581 ttcatgccgt gccagtcggc cacgccctcg tcggcgtcga tcggcggtcc cagcgcgacg
     2641 gcgaaggcgg cgggatcggg cgctgcatcg gtgagctgct gcggcatggg ctgcaccgac
     2701 gccgtgccgc cgtccgcatc gggctcgagc ggggtctcgg tgacgctgac ggtgccgccg
     2761 tccaccgcaa aggtcttggg cggcggcgtc gccgtggagc cggtgacggt ggcggtatcg
     2821 accacggggg cagatgcggg ggcggcggct tcgagcagcc tgggcacgga cagctccagc
     2881 gcgccgacgc ggcgggtgac ggcgccggcg gtctgctcgg ccagcgcgaa acgctgcgac
     2941 agcacggtgt cggcctgctg cagatcggcg gatttgccct tgagcagcgc cagctcggcc
     3001 cgaagctggg tgaggtcggc gccgccgagc cgggaggcgt gcagcgaggc gagcacatcg
     3061 tcggggatga gggcggaaat ggtcgagccg agcaccgcga cggtacacgc caccagcgcg
     3121 acgacgcccc agaagcttac atccgatgcc cggaactgat ccgacgcctt cgccaagcca
     3181 cccgccccat gcgcgctcga atcgcgcgcc cgccggagtt taccatcggc gcgatgtaat
     3241 ggtttcccaa cacgttgctg acataaaatg aagcgagatt ccgggtgaaa agcggggcgg
     3301 acatggcgga actggtgtcg atcatcctgg cggcgggcga gggcacccgc atgcgatcga
     3361 cgctgccgaa aatcctgcac ccggtcggcg gactgccgat catcggccac gtggtgcgcg
     3421 cggcggtcga cgccggctcg acgcaggtgg cggtgattac cgctcccggc cacactgccg
     3481 tgcgcgacat ggtcggggcg ctctatccgc aggtgcagtt cttcgaacag gcagagcgca
     3541 agggcacggc gcatgccgcc tcgatggcaa agccgctgtg ggagggcgcc gaaggctatg
     3601 tcgccgtggt ctatggcgac catccgatgc tgcgcgaggc gaatttccgg ctggtgaccg
     3661 agcggctcga cgccggcatg gacgcggcga tcctcgggtt catccccgcc gatccgacgg
     3721 gctatggccg gttcatcacc gacggcgaaa agctgctggc gatccgcgag cagaaggacg
     3781 ccagcgagga cgaacgcaag atcgggctct gcaacgcctg catcctggtg ttccgcggtc
     3841 cggtgttcgc cgagctgatc ggcagggtgg ggacggccaa cgcgcagggc gaatattacg
     3901 tcaccgacct ggtcgagctc gccaacagcg ccggctacaa ggtcggctac gccgtggcgc
     3961 cggagcgcga cgtgatgggc gtcaacgacc gctcgcaact ggcgaaggcc gaagcgcagt
     4021 tccaggactt gcggcgcgac gatttcatga aggccggggt gacgctgaag gaccccgcga
     4081 cggtgcattt ctcctacgac acggcgatcg gccgcgacgt gacgatctgg ccgaacgtgg
     4141 tgttcgggcc gggggtcgtg atcgccgaca atgtcgaaat ccgcgccttc tgcgacatcg
     4201 agcaggcgag catcggggat ggcgccagca tcgggccgtt cgcgcgcatc cgcggcgggg
     4261 ccgagctcgg gcgcgacgtg cacctcggca atttcgtcga ggtcaagaaa tcgaggatcg
     4321 gcgccggcac caaggcgggg cacctgagct atctgggcga cgcggtgatc ggcgagaaga
     4381 ccaacatcgg cgccggcacc atcacctgca actacgacgg cgtgaacaag gacatcacga
     4441 ccatcggcaa caacgtcttc atcggctcga acaccgcgct ggtggcgccg gtgacggtgg
     4501 gggacggggc ctacacggcg tcgggcagcg tcatcaccga cgacgtgccg gccgatgccg
     4561 tcgccttcgg ccgggcccgg caggagaaca agccgggcta cgcgccgaaa ctgaagcagc
     4621 gggcgctggc gcgcaaggcg gcgaaggccg cgaaggggaa gagctgatgt gcggcatcgt
     4681 cgggatcatc ggcaccgaag cggtggcgcc gcggctggtg gacgcgctga ggcgcctcga
     4741 gtatcgcggc tacgacagcg ccggcgtggc gacgctggaa catggatcca ttgcgcgacg
     4801 ccgggccgag ggcaagctcg gcaatctcgc gaccaagctc ggcatggagc cgctcgcggg
     4861 ccgcatcggc atcggcca
//
LOCUS       DATAZA010000186         5345 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1297208, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000186 DATAZA010000000
VERSION     DATAZA010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5345
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1297208"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..822
                     /gene="pgk"
                     /locus_tag="VHZ56_04785"
     CDS             <1..822
                     /gene="pgk"
                     /locus_tag="VHZ56_04785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008037478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEX4297316.1"
                     /translation="EANDPELAKRMASLGDIYVNDAFSAAHRAHASTEGLAHLLPSAA
                     GLAMEAELKALEAGLGNPKRPVVAVVGGAKVSSKIELLQNLVTKVDALVIGGAMANTF
                     LLAEGIGVGKSLAERDMDDTVNAILDKAEKASCAIIVPVDGVVAWTFAANAPHQNYGL
                     DAMDPEGMILDIGRQSIERIKGAVDEAATLVWNGPLGAFETTPFDAGTVAVAKYVAAR
                     TRAGKLVSIAGGGDTVAALAQAGVKDEFSYVSTAGGAFLEWMEGKTLPGVAALMG"
     gene            896..1921
                     /locus_tag="VHZ56_04790"
     CDS             896..1921
                     /locus_tag="VHZ56_04790"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HEX4297317.1"
                     /translation="MTSLNEIAVKLVGPGTGILAADESEGTIAKRFAIIGLPVTFETR
                     RDYREMLFRSRGAMTPYISGAILTEETLLQNAADGTPFVAILADADVMPGIKVDRGAF
                     PMPGTRGEQITEGLDGLRQRLAHYARLGAKFAKWRGVIAVNKVAPSRNGIRANAHVLA
                     RYAALCQETGIVPVVEPEVLADGEPGDHSIERSAEVTRETLATVFQELRLAGVDLSGM
                     LLKPNMVTPGVHSSEKVTAEQIARATVDVLKAEVPAAVPGIAFLSGGQSDEAATANLS
                     AMNQLGPLPWKLTFSFGRALQHAAMLAWDGEAANVPAAQAAFAHRARMNSLASLGEWR
                     PDLDRAA"
     gene            1978..2583
                     /locus_tag="VHZ56_04795"
     CDS             1978..2583
                     /locus_tag="VHZ56_04795"
                     /inference="COORDINATES: protein motif:HMM:NF014622.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEX4297318.1"
                     /translation="MTAQIFLIAPAGADAPACLLRLREALAATAVAVLLLPRGGRSEG
                     SYKTLVKGVVGAAQAAGVAVLIEGEPGLVRMLGADGLHVEGDVGDVRAATAALKPDYI
                     VGAGAIASRHDAMSKAELGPDYIFFGPLSGARDPEQREMARWWAEIMEVPSVLSDPAA
                     TGETATSEGAEFIGLGDSLWGAPEGVTARLDAIAQALEQAP"
     gene            2580..3701
                     /locus_tag="VHZ56_04800"
     CDS             2580..3701
                     /locus_tag="VHZ56_04800"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4297319.1"
                     /translation="MKLLPATAAALIVAMVAPALAASAPAASALEAGHVDNSLGLEDA
                     PSAEPVEGGTDALSISQDIFSHRDDAYGAFQRGYYLTALALALPRAEKADPAAQTLIA
                     EIYAKGLGVAENVARASGWFQLAAKNGDSNAAFELGMLYLQGDGVPKNPGRAAQLFKQ
                     AADKGHPEAEYNLALMHADGLDASPSLSDAAKLMQLAADSGLAEAQYDYGQMQIQGSG
                     VAPNSQAGAKEIGLAAAQGLVAAQIDYATLLYLGQGVPKSLHDAVGWYQRAANVGNPV
                     AQNRLAKLYAVGEGVPLDLKQAAMWRALARRQGLTDPLTDKLLVSIMPADLAAAEELA
                     RFWPDQPPTSADAAGPASKLAPDPDPKAAAAAAASAAGT"
     gene            3754..4548
                     /locus_tag="VHZ56_04805"
     CDS             3754..4548
                     /locus_tag="VHZ56_04805"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEX4297320.1"
                     /translation="MARSALLNIMVTAAFKAGRSLTKDFGEIENLQVSVKGPADFVSN
                     ADRSAEKIVHAELSKARPTYGFLMEEGGEIKGSDGQHRWIIDPLDGTTNFLHGIPLFA
                     VAIALQRGDEIVASVIYNPITEELFVAEKGGGAWLDERHRLRVAGRKHLADCVVSMGL
                     KTTGTAKDALEFRQLGAIAPATAGIRRTGSASTDLAWLAAGRIDGFWEVGLSPWDVAP
                     GWLMLREAGGTMTDFAGGAGSIWNGEVVAGNETVQGQLLKLIKGVK"
     gene            4653..>5345
                     /locus_tag="VHZ56_04810"
     CDS             4653..>5345
                     /locus_tag="VHZ56_04810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotA"
                     /protein_id="HEX4297321.1"
                     /translation="MSQTYDPYHLKSPTIYLLKMVVFLVIVALVAAILSQSIITFFWA
                     NPFINSLIVLVAATGIVLSFRQVMRLFPEIKWVNSMQDGTMARVRQPVLLAPVAGMLR
                     DRLGEAVITPSSMRSILDSVGNRLDEAKDTSRYLTGLLVFLGLLGTFYGLLETVTHVA
                     ATIQALDTSTGDTASLFANLKEGLAAPLGGMGTAFSASLLGLSGSLILGFLDLQTSQA
                     QNAFYTDLEDWMT"
BASE COUNT          861 a         1709 c         1960 g          815 t
ORIGIN      
        1 gaagcgaacg atcccgagct ggctaagcgc atggcgtcgc tgggcgacat ctacgtcaac
       61 gacgcgtttt cggcggcgca tcgggcgcat gcctcgacgg aagggctggc gcacctgctg
      121 ccatcggcgg cggggctcgc catggaggcc gagctcaagg cgctcgaggc gggcctgggc
      181 aatccgaagc ggccggtggt ggccgtggtc gggggcgcca aggtctcgag caagatcgag
      241 ctgctgcaga acctcgttac aaaggtcgat gcgctggtga tcggcggggc gatggccaat
      301 accttccttc tcgccgaggg catcggtgtc ggcaagtcgc tggccgagcg cgacatggac
      361 gataccgtca acgccatcct cgacaaggcc gagaaggcca gttgcgcgat catcgtgccg
      421 gtcgacggcg tggtggcctg gaccttcgcc gcgaacgcgc cgcaccagaa ttacgggctc
      481 gatgcgatgg accccgaggg catgatcctc gacatcggcc ggcaatcgat cgagcgcatc
      541 aagggcgccg tcgacgaggc ggcgacgctg gtatggaacg ggccgctcgg ggcgttcgag
      601 actacgccgt tcgacgccgg aacggtggcg gtcgccaaat acgtcgcggc acgtaccagg
      661 gccggcaagc tggtgtcgat cgccggtggc ggcgacacgg tcgcggcgct agcgcaggcc
      721 ggggtcaagg acgaattcag ctatgtgtcg acggctggcg gcgcgttcct cgaatggatg
      781 gaaggcaaga ccctgcccgg cgttgcggcg ctgatggggt gaggcgcgtt agacttccgt
      841 cgtatcgtcg ccggccggct ggtccgctag gtacgggccg aacgaggaga actgcatgac
      901 gtcgctcaat gaaatcgccg tgaagctggt cggtccgggc accggcatcc tcgccgccga
      961 cgagtcggaa ggcaccatcg ccaagcggtt cgcgatcatc ggcctgccgg tgacgttcga
     1021 gacgcggcgc gattaccgcg agatgctgtt ccgttcgcgc ggggcgatga ccccgtacat
     1081 ctcgggcgcg attctcaccg aagaaacgct gctgcagaac gctgccgatg gaacgccgtt
     1141 cgtggcgatc ctcgccgacg ccgacgtgat gcccggcatc aaggtcgacc gcggcgcgtt
     1201 tccgatgccg gggacccgcg gcgagcagat caccgaaggc ctcgacggac tgcggcagcg
     1261 actggcgcat tacgccaggc tgggggcgaa attcgccaaa tggcgcgggg tcattgccgt
     1321 caacaaagtc gcgccgtcac gcaacggcat ccgggccaac gcgcatgtgc tggcgcgtta
     1381 tgcggcgctc tgccaggaga ccggcatcgt gccggtggtc gagcccgagg tgctggccga
     1441 cggcgagccg ggcgaccatt cgatcgagcg gtcggcggaa gtgacgcggg agacgctggc
     1501 gacggtgttc caggagctgc ggctcgccgg cgtcgatctc agcggcatgc tgctcaagcc
     1561 gaacatggtg acgccggggg tgcactcgag cgagaaggtg accgccgagc agatcgcgcg
     1621 cgccacggtc gacgtgctca aggccgaggt gcccgcggcg gtgccgggga tcgccttcct
     1681 cagcggcggc cagtcggacg aggcggcgac cgccaatctg tcggcgatga accagctggg
     1741 gccgctgccg tggaagctga ccttctcgtt tggccgggcg ctgcagcacg cggcgatgct
     1801 ggcgtgggac ggcgaagcgg cgaacgtgcc ggcggcgcag gcggcgttcg cgcaccgggc
     1861 acggatgaac tcgctcgcct cgctgggcga gtggcggccg gacctcgatc gcgccgctta
     1921 acctatttgc gccagattct gcggtaaaac ggcggtcttt gggctatcga ggccgccatg
     1981 accgcccaga tctttctcat cgctcccgcc ggtgccgacg cgccggcctg cctgctgcgg
     2041 ctgcgggagg cgctggcggc caccgctgtg gctgtgctgc tgctgccgcg cggcgggcgg
     2101 agcgagggca gctacaagac cctggtcaag ggcgtggtcg gcgccgcgca ggcggcaggc
     2161 gtcgcggtcc tcatcgaggg cgaacccggg ctggtgcgga tgctgggcgc cgacgggctg
     2221 catgtcgaag gcgatgtcgg tgacgtgcgg gcggcgacgg cggcgctgaa gccggactac
     2281 atcgtcggcg ccggcgcgat cgcgtcgcgg cacgatgcga tgagcaaggc cgaactcggg
     2341 cccgattata tcttttttgg gccgctttcc ggggctagag accccgagca gcgcgaaatg
     2401 gcgcggtggt gggcggagat catggaagtg ccgagcgtac tttccgatcc ggcggcgacg
     2461 ggcgagacgg cgacctcgga gggcgccgaa ttcatcggac tgggcgacag cctgtggggg
     2521 gcgccagagg gggtgaccgc ccgcctcgat gcgattgccc aggcgctgga gcaggcacca
     2581 tgaagctgct gccggcgacg gcggcggcgc tgatcgtggc gatggtcgcg ccggcgctgg
     2641 cggcgagtgc cccggccgca tcggcgctcg aagccggaca tgtcgacaac tcgctcgggc
     2701 tcgaagacgc gccgtcggcg gagccggtcg agggcggcac ggacgcgctg tcgatcagcc
     2761 aggacatctt ttcgcaccgc gacgatgcct atggggcgtt ccagcgcggc tactatctga
     2821 cggcgctggc gctggcgctg ccgcgggccg agaaggccga tccggcggcg cagacgctga
     2881 tcgccgaaat ctacgccaag ggcctggggg ttgccgaaaa cgtcgcgcgg gcgtcgggct
     2941 ggttccagct ggccgccaag aacggcgatt ccaacgcggc gttcgagctc ggcatgctct
     3001 acctgcaggg cgacggggtg ccgaagaatc cggggcgggc ggcgcagctg ttcaagcagg
     3061 cggccgacaa ggggcacccg gaggccgagt acaatctggc gctgatgcac gccgacggcc
     3121 tcgatgcgtc gccgagcctg tccgacgcgg caaagctgat gcagttggct gcggattccg
     3181 ggctggcgga ggcgcaatac gactacgggc agatgcagat ccaggggtcg ggcgtcgcgc
     3241 caaattcgca ggccggggcc aaggagatcg ggctcgcggc ggcgcaggga ctggtcgcgg
     3301 cgcagatcga ctatgcaacg ctgctctatc tcggccaggg cgtaccgaag agcctgcacg
     3361 acgccgtcgg ctggtaccag cgggccgcca atgtcggcaa tccggtggcg cagaaccgcc
     3421 tggccaagct ctacgcggtg ggcgaagggg tgccgctcga cctcaagcag gcggcgatgt
     3481 ggcgagcgct ggcgcggcgc caggggctga cggatccgct gaccgacaag ctgctcgtct
     3541 cgatcatgcc ggccgatctt gccgccgccg aggaattggc gcggttctgg cccgaccagc
     3601 cgccgacgtc tgccgatgcc gccggcccgg cctcgaaact cgcgcccgat cccgatccga
     3661 aggctgcggc agccgcggcg gcttcggcgg cgggcacttg aacccggccg ggttctgggg
     3721 cagagaaccg gcccgttcca gcaaggttgc ctcatggccc gttcggcgct cctcaacatc
     3781 atggtcaccg ccgcgttcaa ggccggccgt tcgctgacca aggatttcgg cgagatcgaa
     3841 aacctgcagg tatcggtaaa ggggccggcc gatttcgtgt cgaacgccga ccggtcggcc
     3901 gaaaaaatcg tccacgccga gctcagcaag gcgcggccga cctacggctt cctgatggag
     3961 gaaggcgggg agatcaaggg cagcgacggc cagcaccgct ggatcatcga tccactcgac
     4021 ggcacgacga atttcctgca cggcatcccg ctgttcgcgg tggcgatcgc gctgcagcgc
     4081 ggcgacgaga tcgtcgcctc ggtgatctac aacccgatca ccgaggagct gttcgtggcg
     4141 gaaaagggcg gcggcgcctg gctcgacgaa cggcaccggc tgcgggtcgc ggggcgcaag
     4201 cacctggccg actgcgtggt ttcgatgggg ctcaagacta ccggcaccgc caaggatgcg
     4261 ctggagttca ggcaactggg ggcgatcgcc ccggcgacgg ccggcatccg gcgcaccggc
     4321 tcggcctcca ccgatctcgc gtggctcgcc gccggccgga tcgacgggtt ctgggaagtg
     4381 ggcctgtcgc cgtgggacgt ggcgcccggc tggctgatgc tgcgcgaggc cggcggcacg
     4441 atgaccgact tcgccggcgg cgccggcagc atctggaacg gcgaagtggt ggccggcaac
     4501 gagaccgtgc agggacagct gctgaagctc atcaaaggcg tcaaataggc gccagccggg
     4561 gcatttcgcc ccgtaagcgc ccctgccaag ccattgtcac gccgggatgg tgtgactaga
     4621 gtccgcggca aatgccgaat ccggctgggg ccatgtcgca gacctacgac ccgtaccatc
     4681 tcaagagtcc gacgatctat cttctgaaga tggtggtctt cctcgtcatc gtggcgctgg
     4741 tggcggccat cctcagccag tcgatcatca cgttcttctg ggccaacccg ttcatcaaca
     4801 gcctgatcgt gctggtggcg gccaccggca tcgtgctgag cttccggcag gtgatgcggc
     4861 tgtttcccga gatcaaatgg gtgaactcga tgcaggacgg caccatggcg cgagtgcgcc
     4921 agccggtgct gctggcgccg gtggccggga tgctgcgcga ccggctgggg gaggcggtga
     4981 tcaccccgtc gtcgatgcgc tcgatcctcg attcggtggg caaccggctc gacgaagcca
     5041 aggacacgtc gcgctacctc accggcctgc tggtcttcct cggcctgctc ggcacgttct
     5101 acggcctgct cgaaaccgtg acgcatgtgg cggcgacgat ccaggcgctc gacacctcga
     5161 cgggggacac ggcgagcctc ttcgccaatc tcaaggaagg cctcgcggcg ccgctgggcg
     5221 gcatgggcac ggcgttctcg gcgtcgctgc tcggtctttc gggctcgctg atcctcggtt
     5281 ttctcgacct ccagaccagc caggcgcaga acgccttcta caccgacctc gaggactgga
     5341 tgacc
//
LOCUS       DATAZA010000187         3063 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1760991, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000187 DATAZA010000000
VERSION     DATAZA010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3063
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1760991"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..416)
                     /locus_tag="VHZ56_04815"
     CDS             complement(<1..416)
                     /locus_tag="VHZ56_04815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEX4297322.1"
                     /translation="MPKPTNPLSDPKKRAPETQLVHGGTVRTGFNETSEAIFMNSGYS
                     YPSSQHAEDLFLNKIPGHNYSRFANPTLDMFQDRMALLEGAEAARSFATGMSAVTNAV
                     MSQVRAGDHIVAARALFGGCRYVIEDLMPRFGVPSTL"
     regulatory      complement(458..535)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00521"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00521"
     gene            710..1819
                     /locus_tag="VHZ56_04820"
     CDS             710..1819
                     /locus_tag="VHZ56_04820"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2'-deoxycytidine 5'-triphosphate deaminase"
                     /protein_id="HEX4297323.1"
                     /translation="MTDTHHWSSGVFPARYIERLREQGAISAPPFDADQVQPASLDLR
                     LGTIAYRVRASFLPGPELTVHERIRTLELHRLDLNDGAVLERGCVYLVPLQESLALPP
                     TVSAGANPKSSTGRLDVFTRVIGDRTRSFDTLPAGYHGPLYLEISPRTFPVRVRRGSR
                     LSQMRFRVGDTRLSVAEHRALHAAETLVFDANEQVGEGVALSIDLKGEGRGGLIGFRS
                     KRHTPVIDMDIKDTLDVLDYWEPLINRGSDQFILDPDEFYILVSRESVHVPPAYAAEM
                     VPFDPLVGEFRVHYAGFFDPGFGHSAAGGTGSRAVLEVRSREVPFLLGHGQTIGRLVY
                     ERLNEPPDRLYGTGLGSNYQAQTLKLSKHFRAFAL"
     gene            1894..2829
                     /locus_tag="VHZ56_04825"
     CDS             1894..2829
                     /locus_tag="VHZ56_04825"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX4297324.1"
                     /translation="MDARSPAITVFTPAYNRAHTLPRLYASLRAQTFHDFDWLIVDDG
                     SNDDTADLVARWASDSPFPIHYFCQPHMGKHVAVERASRLATAPLVATIDSDDEALPN
                     TLEFYNREWEAIPLAQREGFSGVSGLAMDDHGALIGTVYPSSPLDSDLNEIRYRWRVT
                     GDKYGCFRREVLGAFADLAAFDLPYISEGIVWARVARRYRHRFFNQFTTRVYIHAGAG
                     NQITRQSPARNAPGMALLHRHRLNEDLDWLGSDPATFLRSAVHYARFSFLSGSGPLQQ
                     WAGLNGALARSLWLAAVGPGWLTSLRDRLRAARPT"
     gene            complement(2861..2934)
                     /locus_tag="VHZ56_04830"
     tRNA            complement(2861..2934)
                     /locus_tag="VHZ56_04830"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2900..2902),aa:Gly,seq:ccc)
BASE COUNT          498 a         1085 c          930 g          550 t
ORIGIN      
        1 agcgtcgagg gcacgccgaa gcgcggcatc aggtcttcga tcacgtagcg gcagccgccg
       61 aacagcgccc gcgccgcgac gatatggtcg ccggcccgca cctggctcat caccgcattg
      121 gtgaccgccg acatgccggt ggcaaaggac cgcgccgcct ccgccccttc gagcagcgcc
      181 atgcgatcct ggaacatgtc gagcgtcggg ttggcgaagc gcgaataatt gtggccgggg
      241 atcttgttga ggaagagatc ctcggcgtgc tgcgaactcg ggtaggaata gcccgagttc
      301 atgaagatcg cttcgctggt ttcgttgaag ccggttcgca ccgtcccgcc atggacgagc
      361 tgcgtttccg gggcgcgctt tttcgggtcg ctcagcggat tggtgggttt cggcatgttc
      421 tggctccaat aacaaaaaac cggcgcgcat gtgcggccgg ttcgagcacg ggtcccttta
      481 gcgacttgtt ttaagtggct gcaatcagac cggccaaatc accactggac tggcctttag
      541 tccggtgcag agtttccgtc aaccacgggt gtcatcccgg ccttgactcg ggacccatct
      601 cgccgttgcc gccgaattgc gacaggtccc cgctttcgcg gggatgacag gcggtggttg
      661 ggatgacatc gccgacccga ctggctacta ccaagcccgg aggcacatct tgaccgacac
      721 ccatcactgg tcatccggcg tttttcccgc ccgctacatc gagcgcctgc gcgagcaggg
      781 agcgatttcg gcgccgccct tcgatgccga ccaggtgcag ccggcaagcc tcgacctccg
      841 cctcggcacc atcgcctatc gcgttcgcgc cagcttcctg cccggaccgg agctcaccgt
      901 gcacgagcgc atccgaacgc tcgagctgca ccggctcgac ctcaacgacg gcgccgtgct
      961 ggagcgcggc tgcgtctacc tggtgccgct gcaggaaagc ctcgcgctgc cccccaccgt
     1021 gtcggcgggc gccaacccca agagctcgac cggccggctc gatgtgttca cccgcgtcat
     1081 cggcgatcgc acccgcagct tcgacacgct gcccgccggc taccacggcc cgctctacct
     1141 cgagatttcg ccgcgcacct tcccggtccg cgtgcgccgc ggctcgcgcc tgagccagat
     1201 gcgcttccgt gtcggcgaca cccgcctcag cgtcgccgag caccgcgcgc tccatgcggc
     1261 cgagacgctg gtgttcgacg ccaacgagca ggtgggcgaa ggcgtcgcgc tgtcgatcga
     1321 cctcaagggc gagggcaggg gcggcctcat cggctttcgc tcgaagcggc acaccccggt
     1381 gatcgacatg gacatcaagg acaccctcga cgtcctcgac tattgggagc cgctcatcaa
     1441 ccgcggcagc gaccagttca tcctcgaccc cgacgagttc tatatcctcg tcagccgcga
     1501 gagcgtccac gtgccgccgg cctacgctgc cgagatggtg cccttcgatc cgctggtggg
     1561 agagttccgc gtccactacg ccggcttctt cgatcccggc ttcggccatt ccgccgccgg
     1621 cggcaccggc agccgcgccg tgctggaggt ccgctcccgc gaggtcccgt tcctgctcgg
     1681 ccacggccag accatcggcc ggctggtcta cgaacgcctg aacgaaccgc ccgaccggct
     1741 ctacggcacc ggcctcggct ccaactacca ggcccagacc ctcaagctca gcaaacactt
     1801 ccgcgcgttc gcgctgtagc tccagctgtc ccatgcgagc atcgttggag atcggatgtg
     1861 agtgacattt cagtcggtgc gagagaggct cgcgtggacg cccgtagtcc ggcgatcacc
     1921 gtcttcacgc cggcctataa ccgcgcccat acgctgccgc gtctctatgc gagcctgcgg
     1981 gcgcaaacct tccacgactt cgactggctc atcgtcgatg acgggtcgaa cgacgacact
     2041 gccgatctgg tagcccggtg ggcctccgac agcccgtttc ccattcacta tttctgtcag
     2101 ccgcatatgg gcaagcacgt cgccgttgaa cgggcgtctc ggctcgcgac cgctccgctg
     2161 gtggcgacca tcgactctga cgacgaggcg ctgcccaata cgctggagtt ctacaaccgc
     2221 gagtgggaag ccattccgct cgcgcagcgc gagggtttct ccggggtctc ggggctggcc
     2281 atggacgacc acggggctct gatcggcacc gtctatccaa gctcgccgct cgacagcgac
     2341 ctgaacgaga ttcgctatcg ctggcgtgtc acgggcgaca agtatggctg ctttcgccgg
     2401 gaggtgctgg gcgcgtttgc cgacctggca gcgttcgacc tgccctacat ttccgaaggc
     2461 atcgtctggg cgagagtggc acgccgttac cgtcaccgct tcttcaacca gttcaccacc
     2521 cgggtctaca tccacgccgg tgccggcaac cagatcaccc gccaaagccc ggcgcgaaac
     2581 gcgccaggca tggctctgct gcaccgccat cgcctcaacg aggacctgga ctggctgggc
     2641 agcgacccgg caacgttcct tcgctcggcc gttcattacg cgcgcttttc gttcctgagc
     2701 ggcagcggcc cgctgcagca gtgggccgga ctcaatggtg ccctggcccg ctctctctgg
     2761 ctcgcagctg tcggtcccgg ctggctcacc tcgctgcgcg accgccttcg tgcggcaaga
     2821 ccaacgtgac cactcctggc gcgcagaggt aaatctatgc tggagcgggt gaagggaatc
     2881 gaaccctcgt cgtaagcttg ggaagcttct gctctgccat tgagctacac ccgcacgcgt
     2941 cttatctgcg gcaacggcct gccgccgtca aggcagcggc gaagacgtcg aggatagccg
     3001 accttccccc gcgaacatcg cccggaccat tcttgaccgt ctggtcaaaa gaccgcactc
     3061 ttc
//
LOCUS       DATAZA010000188        11328 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3734005, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000188 DATAZA010000000
VERSION     DATAZA010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 11328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11328
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3734005"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1680
                     /gene="glnD"
                     /locus_tag="VHZ56_04835"
     CDS             <1..1680
                     /gene="glnD"
                     /locus_tag="VHZ56_04835"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0018177 - protein uridylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HEX4297325.1"
                     /translation="VKIKGETDFVVDSGRLNIAAPNVFQKNPANLIKCFLVAGQQDLL
                     FHPDAIKEIRRSLRLIGHDLRNDAQANAWFLSVLTDPLSVERILRQMNESGVLGKFVP
                     EFGKIVALMQFNMYHHYTVDEHLIRAVGVMAEIANGGLRTELPLTHELLPALNDTRLL
                     YVALFLHDVAKGRPEDHSIAGARIARKFCPRLGLDAAETDTVAWLIEYHLLMSEIAQA
                     RDLQDPETARAFAEIVQSPQRLALLMILTACDIRAVGPGVWTGWKGSLLRSLYYATEP
                     LLSGGHSRVTQSDRIARAKFELEKALTAWPRDELDAYMARHYNHYWLRAELELQLEHA
                     KMVRAADHAHQPFAGAIRVQHFEGITEVSFYTPDHPRLLSLIAGACTMCEASIIGAQI
                     FSTRDGQALDTFRLRRAFTSDEDEKVRANRIIETVKQLLQGKRQILIDLGKESRHNRR
                     LKPFTLPASVEVSNTLSEKFTVIEVSGLDRTGLLHQLTRAISNLNLTIGSAHIGTYGE
                     KAVDVFYVTDLTGHKIESKPRQRVIRDALLQVFQPLAPPGQDERLAKVANG"
     gene            1717..3279
                     /gene="murJ"
                     /locus_tag="VHZ56_04840"
     CDS             1717..3279
                     /gene="murJ"
                     /locus_tag="VHZ56_04840"
                     /inference="COORDINATES: protein motif:HMM:TIGR01695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEX4297326.1"
                     /translation="MTTLYRNFLNVGLMTTGSRILGFVRDALVAAVLGTGPAADAYLA
                     AFRFPNLFRRLFAEGAFNTAFIPLFSKELEQHGMEPARLWAARIMSWLAVTVTIVTIL
                     VELFMPWILPLFVPGFLGDPSKYDLTVLLTRICFPYLMCMSLMAAYAAILNGLNRFIA
                     SSFAPILLNIVMIVFMAPLVLYSNSDVQTAIWIAIGTIAGGIAQLALVYVAIRRSGFV
                     PKLQWPKFDAEVRRFWILAIPAVIAGGITQVNIFVGTIIASSAPSAIAYLYYADRLYQ
                     LPLGIIGIAIGTVLLPELSRHLKGGRDREADASQNQALLISMLLSMPAATALIALAMP
                     IVTVLFQRGAFTAADSYETAQTMIWFSAGLPAYVLIRVLQPGFFAREDTRTPTVFAGI
                     SVAINIAVSLLLFPILKHVGIAVATSVAAWTNAVLLGIWLGRRGHFRLPAEDWRRHAL
                     IVASSVGMGLILWGLAIPLAPYLSPHAPLIAQLVALGALCGLGAGLYFAAVHLTRAQP
                     MGLLLVRLRRSG"
     gene            3353..4387
                     /gene="trpS"
                     /locus_tag="VHZ56_04845"
     CDS             3353..4387
                     /gene="trpS"
                     /locus_tag="VHZ56_04845"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEX4297327.1"
                     /translation="MPFTPRVFSGTQPSGDLHLGNYLGAIKRYVEMQKTHECIYCVVD
                     MHAITVWQDPDDLRRATREVAAAYVAAGVDPQKNIVFNQSRVHQHAELAWVFNCVARM
                     GWMSRMTQFKEKSAGKNAEAISLGLFAYPALMAADILLYKATHVPVGDDQKQHLELTR
                     DIAIKFNNDFAASIAEQRLDADYFPITEPVIAGPATRVMSLKDASKKMSKSDASEGAR
                     ILLMDDADAISRKIKRATTDPEPLPSEEKGLAGRLEADNLVGIYAALGDTTKAAVLAQ
                     FGGQGWGVFKPALADLAVARLAPIAAETRRMAADPGYVDGFMADGAARAAGIAEATMS
                     EVRRIVGFVR"
     gene            4479..4949
                     /locus_tag="VHZ56_04850"
     CDS             4479..4949
                     /locus_tag="VHZ56_04850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX4297328.1"
                     /translation="MADNGYQRKFLVLVDESPECDRAVTFAAHRVLRTGGTLVLLTVI
                     DSEDFGQFIGVEEVMRAEAREAAERSLDVRIARIERIGAVRTETSIREGRPAEAIEAL
                     IAADPGIGILVLAAGIGDKGPGPLVTHFATHSRLHIMVTIVPGAMTDQEIVAVA"
     gene            5016..5804
                     /locus_tag="VHZ56_04855"
     CDS             5016..5804
                     /locus_tag="VHZ56_04855"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX4297329.1"
                     /translation="MAEPTEIRFIDGAGYEEMMGIWSRSAGEVFLEWLAPPKGLRWAD
                     VGCGNGAFTELLVDRCAPAHIIGVDPSPQQLSYARQRHTAGLAEFIEAGAMALPIPDR
                     SVDAATMALVIFFVPEPAKGVAEMRRVVRPGGSVSAYAWDFTTGDFPWQLAQDEVRAT
                     GATVLWPPQAEMVRIDRLHQLWVDAGLQSVASREIVVERVFPSFEEYWRVAMLTPTLG
                     ALTDAMPPATLAGVKERVRAKLRIDGGKVVQTGKANAVKGVVPR"
     gene            5917..6471
                     /locus_tag="VHZ56_04860"
     CDS             5917..6471
                     /locus_tag="VHZ56_04860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HEX4297330.1"
                     /translation="MFIQTEATPNPATLKFLPGRDVLAGEPRDFRDAAAAAVSPLAAG
                     LFSIPGVTGVFLGSDFVSVSKDMTDWAHLKPAILGVIMEHFLSGKPVIDEGNTAAEAG
                     EFFEAADSETVEVIKELISTRVRPAVAMDGGDITFKGFRDGTVYLHMQGACSGCPSST
                     ATLKSGIENLLRHFVPGVEAVAQV"
     gene            6649..7302
                     /gene="tsaB"
                     /locus_tag="VHZ56_04865"
     CDS             6649..7302
                     /gene="tsaB"
                     /locus_tag="VHZ56_04865"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:TIGR03725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEX4297331.1"
                     /translation="MIRLLAPSRAAAYISRMGILLAIDTAAPRLQLALLRDGDRVDTL
                     VEDMATGQAERLFPALGDLLARTGVAYADLARIAVTTGPGSFTGLRIGLSAARGLGLA
                     LNVPVLGIPSLLALSLGAQCDALAVLLDARRDEAYFQLFSGPAIAVAPPALLAVAEAR
                     AQVPLGARIVTGPFVDIAALARFAAIADPALYPPEAAYIRDADAKPQEKFRIARVPA"
     gene            7299..7781
                     /gene="rimI"
                     /locus_tag="VHZ56_04870"
     CDS             7299..7781
                     /gene="rimI"
                     /locus_tag="VHZ56_04870"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HEX4297332.1"
                     /translation="MMVRSWLAPGGLHIEPSQPRDADAVAKLHAQSFYRGWPREDIAA
                     YIMDSDTPTLVACDSKRRVAGFAMLRLLGDDVELMTIAVEPKFRGKGVGAALLKACFE
                     DLLMTPSKRMILEVAADNPAAIRLYQKLGFAKLSERQGYYARPDGKPATALVMARQLE
                     "
     gene            7791..8231
                     /locus_tag="VHZ56_04875"
     CDS             7791..8231
                     /locus_tag="VHZ56_04875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HEX4297333.1"
                     /translation="MSRPGPTETLEEQCAKKGMRMTEQRRVIAQVIETADDHPDVEEL
                     YRRAAAIDARISLSTVYRTLNLFEEAGLVTKHDFRDGRARFEPLPDTHHDHLIDVRSG
                     KVIEFRNEEIEAIQELIAKRLGYRLVDHRLELYAVPLKDEADKR"
     gene            8228..9031
                     /locus_tag="VHZ56_04880"
     CDS             8228..9031
                     /locus_tag="VHZ56_04880"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX4297334.1"
                     /translation="MIFRILFFIVIYVPVMIVIIPTQFVITRLGLFWSGPTMLFHRLG
                     CIFCGLRVHTIGAPLHNRPTLLLSNHISWTDIIAIGSVADVTFVAKTGVRNTFFVGFM
                     ASLQRTLFVDYSRRTDAKRVSGEMARRLARNGAVLLFAEGHRDLGTHVQPFRSALVGA
                     AQAAMAEGGATDVAIQPVTIAYTHLQGLPVSRNERSGISGMNARGLKAVVAGILGSGV
                     KDVTIAFGAPIPLTEGIDRKVVTKQAEDQVRRMLVALNRHEDKLPPLAA"
     gene            9079..10494
                     /gene="miaB"
                     /locus_tag="VHZ56_04885"
     CDS             9079..10494
                     /gene="miaB"
                     /locus_tag="VHZ56_04885"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEX4297335.1"
                     /translation="MTSPDTPPAELRPKKLFIKTYGCQMNVYDSDRMADALAPHGYAP
                     TQTLDDADLVVLNTCHIREKASEKVFSELGRLAELRAEGRAFKIAVAGCVAQAEGEEI
                     ARRAKGVDLVFGPQSYHRLPELVARADRGERVVETEFPAEDKFAHLPGAAPQVIRARG
                     LSAFLTVQEGCDKFCSFCVVPYTRGAEQSRPVEQVLDEARRLVAAGVRELTLLGQNVN
                     AYHGLDARGRPAGLGELCARLAELPGLARIRYTTSHPADMSDELIAAHRDNPKLMPYL
                     HLPVQSGSDRILKAMNRRHGIADYFRIIERVRAARPDIALSGDFIVGVPGEDEADFAD
                     TLRIVREVGYASAYTFKYSIRPGTPGAALPGQVPEAVKSERLARLNEQVTGQMRDFAR
                     ACVGRTLDVLLDKPGRMPGQLGGRSPYLQAVHVVAPENLIGTVQRVEITAAGNNSIEG
                     KIVTQAERKTVSFVESQPVAV"
     gene            10517..>11328
                     /locus_tag="VHZ56_04890"
     CDS             10517..>11328
                     /locus_tag="VHZ56_04890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEX4297336.1"
                     /translation="MNRHLSATPDNALASQLELAFEDNRLAAQLYGDFDQNLALIEQR
                     LSITATPRGNHLLLKGATHAVDQGRRVLESLYGMLEEGRSLDLANVDTLIRMIETEDS
                     QLTLPTLEKKGKVRMAQIATRKATIVARTPAQDAYMRAMERAELVFGIGPAGTGKTYL
                     AVAHAATLLERGDINRIILSRPAVEAGERLGFLPGDLKEKVDPYLRPLYDALYDMMRP
                     EHVERCITSGVIEVAPLAFMRGRTLANAVVILDEAQNTTSMQMKMFLTRLGE"
BASE COUNT         1805 a         4129 c         3554 g         1840 t
ORIGIN      
        1 gtcaagatca agggcgagac ggatttcgtc gtcgacagcg gccggctgaa tatcgcggcg
       61 ccgaacgtgt tccagaagaa cccggccaac ctcatcaagt gcttcctcgt cgccggtcag
      121 caggacctgc tgttccatcc cgatgcgatc aaggaaatcc gccgctcgct gcgcctgatc
      181 ggccacgacc tgcgcaatga cgcgcaggcc aatgcctggt tcctgtcggt actgacggac
      241 ccgctgtcgg tcgagcgcat cctgaggcag atgaacgaat ccggcgtctt gggcaaattc
      301 gtgcccgagt tcggcaagat cgtcgcgctg atgcagttca acatgtacca ccactatacg
      361 gtggacgagc atttgatccg cgccgtcggc gtcatggccg agatcgccaa tggcgggctg
      421 cgcaccgagc tgccgctgac ccatgagctg ctgcccgcgc tcaacgatac gcggctgctc
      481 tatgtggcgc tgttcctcca cgacgtcgcc aagggccggc cggaagacca ctcgatcgcc
      541 ggcgcccgca tcgcccgcaa attctgcccg cggctggggc tcgacgcggc cgagaccgac
      601 accgtcgcct ggctcatcga atatcatctg ctgatgagcg agatcgccca ggcccgcgac
      661 ctgcaggacc ccgagaccgc ccgcgccttc gccgagatcg tgcagtcgcc gcagcggctg
      721 gcgctgctga tgatcctcac cgcctgcgat atccgcgccg tcggcccggg cgtgtggacc
      781 ggctggaagg gctcgctgct gcgctcgctc tattacgcca ccgagccgct gctgtcgggc
      841 ggccattcgc gcgtcaccca gtccgaccgc atcgcccgcg ccaagttcga gctcgaaaaa
      901 gcgctcaccg cctggccgcg cgacgagctc gatgcctata tggcccgcca ctacaaccat
      961 tactggctgc gtgccgagct ggagctgcag ctcgagcacg ccaagatggt gcgcgccgcc
     1021 gatcatgccc accagccctt cgccggcgcc atccgcgtgc agcatttcga gggcatcacc
     1081 gaagtatcgt tctatacgcc cgatcatccg cggctgctgt cgctgatcgc cggcgcctgc
     1141 accatgtgcg aagcctcgat catcggcgcg cagatcttct cgacccgcga cggccaggcc
     1201 ctcgacacct tccggctgcg ccgcgccttc acctccgacg aggacgagaa ggtccgcgcc
     1261 aaccgcatca tcgagacggt caagcagctg ctgcagggca agcgccagat cctcatcgac
     1321 ctcggcaagg agagccgcca caaccgccgc ctgaagccgt tcacgctgcc ggcctcggtc
     1381 gaggtgtcca atacgctgag cgaaaaattc accgtcatcg aggtgtcggg gctcgaccgc
     1441 acgggcctcc tgcaccagct cacccgcgcc atctccaacc tcaacctcac catcggctcg
     1501 gcgcacatcg gcacctatgg cgaaaaggcc gtcgacgtct tctacgtcac cgatctcacc
     1561 ggccataaga tcgagagcaa gccgcgccag cgcgtcatcc gcgacgccct gctgcaggtc
     1621 ttccagccgc tcgccccgcc gggccaggac gagcgtctgg cgaaagtggc caatggctag
     1681 atttgatcgg gcgacggccc ctccaccggt cgtcaagtga ccaccctcta ccgcaatttc
     1741 ctcaatgtcg ggctgatgac caccggcagc cgcatcctcg gcttcgtgcg cgatgcgctg
     1801 gtcgccgccg tgctcggcac cgggccggcc gccgacgcct atctcgcggc gttccggttc
     1861 cccaacctgt tccgccggct gttcgccgag ggcgccttca acaccgcctt cattccgctg
     1921 ttctcgaagg agctcgagca gcatggcatg gagccggcgc ggctctgggc ggcacgcatc
     1981 atgagctggc tggcggtgac ggtgaccatc gtcaccatcc tcgtcgagct cttcatgccg
     2041 tggatcctgc cgctgttcgt gccgggcttc ctgggcgacc cgtcgaaata cgacctgacg
     2101 gtgctgctga cccgcatctg cttcccgtac ctgatgtgca tgtcgctgat ggcggcctac
     2161 gcggcgatcc tcaacggcct caaccgcttc atcgcctcct cgttcgcgcc gatcctgctg
     2221 aacatcgtga tgatcgtgtt catggcgccg ctggtgctct attccaacag cgacgtgcag
     2281 acggcgatct ggatcgccat cggcaccatc gccggcggca tcgcccagct ggcgctggtc
     2341 tatgtcgcca tccgccgctc cggcttcgtg ccaaagctgc agtggccgaa gttcgacgcc
     2401 gaggtccgcc gcttctggat cctcgccatt cccgccgtca tcgccggcgg catcacccag
     2461 gtgaacattt tcgtcggcac catcatcgcc tcgtcggcgc cgagcgccat cgcctatctc
     2521 tactacgccg accggctcta ccagctgccg ctcggcatca tcggcatcgc catcggcacc
     2581 gtgctgctgc ccgagctcag ccggcacctc aagggcggcc gcgaccgcga ggccgatgcc
     2641 agccagaacc aggcgctgct gatctcgatg ctgctgtcga tgccggcggc gacggcgctc
     2701 attgcgctgg cgatgccgat cgtcaccgtg ctgttccagc gcggcgcctt taccgccgcc
     2761 gacagctacg agaccgccca gaccatgatc tggttctcgg ccgggctgcc cgcctacgtg
     2821 ctgatccgcg tgctgcagcc cggcttcttc gcccgcgagg atacccgcac gccgacggtg
     2881 ttcgccggca tctcggtcgc catcaacatc gccgtctcgc tgctgctgtt ccccattctc
     2941 aaacatgtcg gcatcgccgt cgcgacctcg gtcgccgcct ggaccaacgc cgtgctgctc
     3001 ggtatctggc tcggccgccg cggccatttc cggctgccgg cagaggattg gcggcggcac
     3061 gcgctgatcg tcgcctcctc ggtcggcatg gggctgatcc tctggggcct ggccattccg
     3121 ctggcgccgt atctcagccc gcacgcgccg ctgatcgccc agctggtggc gctcggcgcc
     3181 ctctgcgggc tcggcgccgg actgtatttc gccgccgtgc atctcacccg cgcccagccg
     3241 atggggctgc tgctggtccg gctccgccgc agcggctgat ccgccccggt cggcgggcct
     3301 tgcggcggag cggccggaaa ggctagagcg ggccaaacct caaggtcgag ccatgccctt
     3361 cactccgcgc gtcttttccg gcacccagcc ctcgggcgac ctgcacctcg gcaactacct
     3421 cggcgccatc aagcgctacg tcgagatgca gaagacccac gagtgcatct actgcgtcgt
     3481 cgacatgcac gcgatcaccg tctggcagga cccggacgat ctgcgccgcg ccacccgcga
     3541 ggtcgcggcc gcctatgtcg cggccggggt cgatccgcaa aagaacatcg tcttcaacca
     3601 gtcccgggtg caccagcatg ccgagctggc ctgggtgttc aactgcgtcg cccgcatggg
     3661 ctggatgagc cgcatgaccc agttcaagga gaagtcggcc ggcaagaacg ccgaggcgat
     3721 ctcgctcggc ctgttcgcct atccggcgct gatggcggcc gacatcctgc tctataaggc
     3781 aacgcatgtg ccggtcggcg acgaccagaa gcagcatctg gaactgaccc gcgacatcgc
     3841 catcaagttc aacaacgatt tcgccgcttc gattgccgaa cagcggctcg acgccgatta
     3901 tttcccgatc accgagccgg tgatcgccgg cccggcgacg cgcgtcatgt cgctcaagga
     3961 cgccagcaag aagatgagca agtccgatgc ctcggagggc gcccgcatcc tgctgatgga
     4021 cgacgccgac gccatcagca ggaagatcaa gcgcgccacc accgatcccg agccgctgcc
     4081 aagcgaggaa aagggcctcg cgggccgcct cgaggcagac aacctcgtcg gcatctatgc
     4141 cgccctcggc gacaccacca aggcagcggt gctcgcccag ttcggcggcc agggctgggg
     4201 cgtgttcaag ccggcgctgg ccgacctcgc ggtggcaagg ctcgccccga tcgccgccga
     4261 gacccgtcgc atggccgccg atccgggcta tgtcgatggc ttcatggccg atggcgcggc
     4321 acgcgccgcc ggcatcgccg aggcgaccat gtccgaggtg cgccgcatcg tcggcttcgt
     4381 gcgctaggca cggcggttcg gcacctgcgg tcctcgacgg cttgttcaaa gccgccgcgg
     4441 atgggacaat gccccgaccc tgagcgaagc ggcggcccgt ggcggacaac ggctatcagc
     4501 gcaaattcct cgtcctcgtc gacgaatcgc ccgagtgcga ccgggcggtg acctttgccg
     4561 cccaccgggt gctgcgcacc ggcggcaccc tggtgctgct gacggtgatc gacagcgagg
     4621 atttcggcca gttcatcggc gtcgaggagg tcatgcgggc cgaggcgcgc gaggcggccg
     4681 aacgcagcct cgacgtccgc atcgcccgca tcgagcggat cggcgccgtc cgcaccgaga
     4741 cctcgatccg cgagggccgc ccggccgaag ccatcgaggc gctgatcgcc gctgatcccg
     4801 gcattggcat cctggtgctt gccgccggca tcggcgacaa ggggccggga ccgctggtca
     4861 cccattttgc cacgcacagc cggctgcaca tcatggtgac gatcgttccg ggcgccatga
     4921 ccgaccagga aatcgtcgcc gtggcctgag gccgcaaatg atggcgcgcg gggccgggtt
     4981 atcctgctag tcttgccgcc aaagggagac cgccgatggc cgaaccaacc gagatccgct
     5041 tcatcgacgg cgccggctac gaagagatga tgggcatctg gagccgctcc gccggcgagg
     5101 tcttcctcga gtggctggcg cccccaaagg gcctgcgctg ggccgatgtc ggctgcggca
     5161 acggcgcctt caccgagcta ttggtcgacc gctgcgcccc ggcgcacatc atcggcgtcg
     5221 atccctcgcc gcaacagctg agctatgccc gtcagcgcca caccgccggg ctggcggaat
     5281 tcatcgaggc gggcgccatg gcgctgccga tccccgacag gagcgtcgat gcggcgacca
     5341 tggcgctggt catcttcttc gtgcccgaac cggccaaggg ggttgccgag atgcggcgcg
     5401 tcgtccgccc gggcggctcg gtgtctgcct atgcctggga cttcaccacc ggcgacttcc
     5461 cctggcagct ggcgcaggac gaagtgcggg cgaccggcgc caccgtgctg tggccgccac
     5521 aggccgagat ggtccggatc gaccgcctgc accagctttg ggtcgatgcc ggcctgcaat
     5581 ccgtcgcctc gcgcgaaatc gtcgtcgagc gcgtgtttcc gagcttcgag gagtattggc
     5641 gcgtcgccat gctcactcct accctcggcg cgctgacgga cgccatgccg ccggcgaccc
     5701 tcgccggcgt caaggagcgg gtgcgggcca agctgcgcat cgatggcggc aaggtggtgc
     5761 agaccggcaa ggccaatgcg gtcaagggcg tcgtcccgcg ctagcgcttg ccaagcggcg
     5821 ctcgattgcc tattttagaa ccgttccaaa ccgacccgcg ttggtcggcc ggcgcagagc
     5881 gacggcccca cccagagcga gaaagaccag tccgcgatgt tcatccagac cgaagccacg
     5941 cccaatccgg cgacgctgaa attcctgccc gggcgcgacg tgctggccgg cgagccgcgc
     6001 gattttcgcg acgccgccgc tgctgccgtg tcgccgctgg ccgcgggact gttctcgatt
     6061 ccgggcgtca ccggggtgtt cctcggctcc gatttcgtct cggtcagcaa ggacatgacc
     6121 gactgggccc acctcaagcc ggcgatcctc ggcgtcatca tggagcattt cctctccggc
     6181 aagccggtga tcgacgaggg caacaccgcc gccgaggcgg gcgagttctt cgaggccgcc
     6241 gacagcgaga ccgtggaagt catcaaggaa ctgatctcga cccgcgtccg cccggcggtc
     6301 gccatggacg gcggcgacat caccttcaag ggctttcgcg acggcacggt gtacctccac
     6361 atgcagggcg cctgctccgg ctgcccgtcc tcgaccgcga cgctgaagtc cggcatcgag
     6421 aatttgctgc ggcatttcgt gcccggcgtc gaggccgtcg cgcaggtctg agcttgcccg
     6481 tcttcaccct ccccctcgcg gggaggatag cgcagctcgg accttggtcc gcagcgcagc
     6541 tggggtgggg ggatggcctc catccatgcc gacttcgtcc ccctccggct cgatcacgga
     6601 gttagcgaag ggctaagtcc tatctcgctt cctccccgca cgggggaggt gatccgactg
     6661 cttgctccgt cgcgtgctgc agcctacatc agccgcatgg gcatcctcct cgccatcgac
     6721 accgccgcgc cgcggctgca gctggcgctg ctgcgggacg gcgaccgtgt tgataccctc
     6781 gtcgaggaca tggcgacggg gcaggccgag cggctgtttc cggccctcgg tgacttgctg
     6841 gcgcgcaccg gcgtcgccta tgccgatctc gcgcgcatcg cggtcaccac cggaccgggc
     6901 tccttcaccg gccttcgcat cgggctcagc gccgcgcgcg ggctgggcct cgcgctgaat
     6961 gtgccggttc tcggcatccc ctcgctgctg gcgctctcgc tgggcgcgca atgcgacgcc
     7021 ctcgccgtgc tgctcgatgc gcgccgcgac gaggcctatt tccagctgtt ttccggcccc
     7081 gccatcgccg tcgcgccgcc cgccctgctg gcggttgccg aggctcgggc gcaggtgccg
     7141 ctcggggcca ggatcgtcac cggcccgttt gtcgatatcg ctgcgctggc ccgctttgcc
     7201 gccatcgccg atccggcgct ctatccgccc gaggccgcct acatccgcga cgccgacgcc
     7261 aagccgcagg agaagttccg catcgccagg gtgccggcat gatggtccgc agctggctgg
     7321 caccgggcgg cctccacatc gagccgagcc agccgcgcga tgccgatgcg gtggcaaagc
     7381 tgcacgccca gagcttttat cgcggctggc cgcgcgagga catcgccgcc tatatcatgg
     7441 acagcgacac cccgaccctg gtcgcctgcg acagcaagcg ccgcgtcgcc ggcttcgcca
     7501 tgctgcggct gctcggcgac gacgtcgagc tgatgaccat cgcggtcgag ccgaagtttc
     7561 gcggcaaggg cgtaggcgcc gctttgctca aggcctgctt cgaggatttg ctgatgacgc
     7621 cgtccaagcg catgatcctc gaggttgccg ccgacaatcc cgccgccatc cggctctacc
     7681 agaagcttgg ctttgccaag ctgtccgagc gccagggata ttatgcgcgc cccgacggca
     7741 agccggcgac cgcgctggtg atggcgcggc aactggagta ggattccacc atgtccaggc
     7801 ccggaccgac cgaaacgctc gaggagcaat gcgccaagaa gggcatgcgc atgaccgagc
     7861 agcgccgcgt catcgcccag gtgatcgaga cggctgacga tcatcccgac gtcgaggagc
     7921 tgtatcgccg ggccgcggcg atcgacgccc gcatttcgct gtcgaccgtc taccgcaccc
     7981 tcaacctgtt cgaggaagcc gggctggtca ccaagcacga tttccgcgac ggcagggcgc
     8041 gcttcgagcc gctgcccgat acccatcacg accatctgat cgacgtccgc tcgggcaagg
     8101 tcatcgagtt ccgcaacgag gagatcgagg ccatccagga gctcatcgcc aagcgcctgg
     8161 gctaccggct cgtcgatcac cggctcgagc tctacgccgt gccgctcaag gacgaggccg
     8221 acaagcgatg atcttcagaa tactgttctt catcgtcatc tacgtgccgg tgatgatcgt
     8281 catcatcccc acccagttcg tcatcacccg gctcggcctg ttctggagcg gcccgaccat
     8341 gctgttccac cggctcggct gcatcttctg cgggctgcgg gtccacacca tcggcgcgcc
     8401 gctccacaac cggccgacgc tgctgctgtc caaccacatc agctggaccg acatcatcgc
     8461 catcggttcg gtcgccgacg tcaccttcgt ggccaagacc ggcgtgcgca acaccttctt
     8521 cgtcggcttc atggcgtcgc tgcagcgcac cctgttcgtc gactacagcc ggcgcaccga
     8581 tgccaagcgc gtcagcggcg agatggcgcg gcggctggcg cggaacggtg cggtgctgct
     8641 gtttgccgaa ggccatcgcg acctcggcac gcatgtccag ccattccgct cggcgctggt
     8701 cggtgccgcg caggcggcga tggccgaggg cggcgccacc gacgtcgcca tccagccggt
     8761 caccatcgcc tacacccacc tgcagggcct gccggtcagc cgcaacgagc gcagcggcat
     8821 ttccggcatg aacgcccgcg gcctcaaggc ggtggtcgcc ggcatcctcg gcagcggcgt
     8881 caaggacgtc accatcgcct tcggcgcccc gattccactg accgaaggga tcgaccgcaa
     8941 ggtcgtcacc aagcaggccg aggaccaggt ccgccgcatg ctggtcgccc tcaaccgcca
     9001 cgaggacaag ctgccgccgc tggcggcgta ggaccggccg ctggccccct gcctccgccg
     9061 gtgctaaatc cccgtccaat gacttcgccc gataccccac cggcagagct ccggccgaaa
     9121 aagctgttca tcaagaccta cgggtgccag atgaacgtct acgacagcga ccgcatggcg
     9181 gacgcgctgg cgccgcacgg ctacgccccg acccagacgc tggacgacgc cgatctcgtc
     9241 gtcctcaaca cctgccacat ccgcgaaaag gccagcgaga aggtgttctc cgagctcggc
     9301 cggctcgccg aactgcgcgc cgaaggccgg gccttcaaga tcgccgtggc gggctgcgtc
     9361 gcccaggccg agggcgagga gatcgcccgc cgcgccaagg gcgtcgacct ggtgttcggc
     9421 ccgcaatcct accaccggct gcccgagctc gtggcccgcg ccgaccgcgg cgagcgcgtc
     9481 gtcgagacgg agtttcccgc cgaggacaag ttcgcgcacc tgccgggtgc tgccccgcag
     9541 gtcatccggg cgcgcggcct cagcgccttc ctcacggtgc aggaaggctg cgacaagttc
     9601 tgctcgttct gcgtcgtgcc ctacacccgc ggcgccgaac agagccggcc ggtcgagcag
     9661 gtgctcgacg aggcccgccg gctggtcgcg gcgggggtgc gggagctgac gctcctcggc
     9721 cagaacgtca acgcctacca cgggctcgat gcccgcggcc gcccggccgg tctgggcgag
     9781 ctctgcgccc gcctcgccga gctgcccggc ctcgcccgca tccgctacac caccagccac
     9841 cccgccgaca tgtcggacga gctgatcgcg gcgcatcgcg acaatcccaa gctgatgccc
     9901 tatctgcacc tgccggtgca gtcggggtcg gaccgcatcc tcaaggcgat gaaccgccgt
     9961 catggcatcg ccgactactt ccggatcatc gagcgcgtcc gggccgcccg cccggacatc
    10021 gcgctctcgg gcgatttcat cgtcggcgtc cctggcgagg acgaagccga tttcgcggat
    10081 acgttgcgta tcgtccgcga ggtcggctac gcctcggcct acaccttcaa atactcgatc
    10141 cgccccggca cgccaggcgc cgcgctgccc ggccaggtgc ccgaagcggt gaagtccgag
    10201 cgactggcgc ggctcaacga gcaggtaacg gggcagatgc gcgacttcgc cagggcctgc
    10261 gtcggccgca ccctcgatgt gctgctggac aagcccggcc gcatgcccgg ccagctcggc
    10321 ggccgctcgc cctacctgca ggcggtgcat gtcgtggcgc cggaaaatct tattggcacc
    10381 gtgcaaaggg ttgaaatcac cgccgccggg aataactcaa ttgaaggcaa gattgtcaca
    10441 caagcggaac gcaaaactgt tagttttgtt gagtcacaac cggttgcggt ctgaccgctg
    10501 aaagggttcg agccacttga acaggcattt gtccgccacc cccgacaacg ccctcgcctc
    10561 gcagcttgaa ctggccttcg aagacaaccg gctcgccgcc cagctctacg gcgacttcga
    10621 ccagaacctc gcgctcatcg aacagcgcct gtcgatcacc gccacgccgc gcggcaacca
    10681 tctgctgctg aagggcgcca cgcacgccgt cgaccagggc cgccgggtgc tggaatcgct
    10741 gtacgggatg ctcgaggagg gccgctccct cgacctcgcc aatgtcgaca ccctgatccg
    10801 catgatcgag accgaggaca gccagctcac gcttccgacc ctcgagaaga agggcaaggt
    10861 gcggatggcg cagatcgcca cgcgcaaggc gaccatcgtc gcccgcaccc cggcccagga
    10921 tgcctatatg cgcgccatgg agcgcgccga gctggtgttc ggcatcggtc ccgccggcac
    10981 cggcaagacc tatctcgccg tcgcccacgc ggcgacgctg ctcgagcgcg gcgacatcaa
    11041 ccgcatcatc ctttcccgcc cggcggtcga agccggcgag cggctcgggt tcctccccgg
    11101 cgacctcaag gaaaaagtcg atccctacct ccgcccgctc tacgacgcgc tctacgacat
    11161 gatgcgcccc gagcatgtgg aacgctgcat cacctcgggc gtcatcgagg ttgccccgct
    11221 ggccttcatg cgcggccgta ccctggccaa cgccgtggtc atcctcgacg aggcgcagaa
    11281 caccacctcg atgcagatga agatgttcct gacccgcctg ggcgagaa
//
LOCUS       DATAZA010000189         2236 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3617290, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000189 DATAZA010000000
VERSION     DATAZA010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2236
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3617290"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..743)
                     /locus_tag="VHZ56_04895"
     CDS             complement(<1..743)
                     /locus_tag="VHZ56_04895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4297337.1"
                     /translation="MSDPLLIVEDLEVTFPGRTGATRAVRNASFTLGRERLGIVGESG
                     SGKSTTGRALLGLVPRPGIVTAKTMSYEGRDLLACSERDWQKLRGRRLSMVMQDPKYS
                     LNPVQTVGRQISETCFLHLRTSRADARKRTLAMLEAVQIRDPELVSHLYPHQLSGGMG
                     QRVMIAMMLIAEPDLLIADEPTSALDVTVQNEVLRILDALVRERGMGLIFISHNLTVV
                     ASFCDRVLIMYGGRIVEECAARDLQHARHP"
     gene            complement(740..1642)
                     /gene="nikC"
                     /locus_tag="VHZ56_04900"
     CDS             complement(740..1642)
                     /gene="nikC"
                     /locus_tag="VHZ56_04900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007008071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel transporter permease"
                     /protein_id="HEX4297338.1"
                     /translation="MTDTLGQWLTSEAPTSRRQAAFGSFYRAFRSILRNPTAVVGMVI
                     VTALILMAIFAPWLSLGQSPLDQDLAGRLAAPSAGHWFGTDELGRDIFARTLYGARVT
                     LTIVALVSVLVAPIGLAVGTVAGYLGGWVDAVLMRITDVFLAFPRLVLALAFAAALGP
                     GINNAVIAIALTAWPPYARIARSETMAIARSDFIQAVVLEGASTWRILFRHIVPLCLS
                     SVIVRLTLDMAGIILTAAGLGFLGLGAQPPTAEWGAMVSSGRDVILDQWWVATIPGVA
                     IFVVSLGFNLLGDGLRDVFDPKSG"
     gene            complement(1639..>2236)
                     /locus_tag="VHZ56_04905"
     CDS             complement(1639..>2236)
                     /locus_tag="VHZ56_04905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013527925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4297339.1"
                     /translation="GYSVPVFWLGLVGLFVFYGELGWVAGPGRLDVVYQATMTPITGI
                     VLVDAAIQGEWDMFWNAFGHLILPAGILGYYSLAYIARMTRSFMIEQLSQEYVTAARI
                     KGNSFWGTVWRHAFPNIMVPLVTVIGLSYASLLEGAVLTETVFAWPGLGLYITHALFN
                     SDMNAVLGGTVVVGTVFIGVNLICDLLYKLFDPRLRTS"
BASE COUNT          415 a          728 c          787 g          306 t
ORIGIN      
        1 ggatggcggg catgctgcag gtcgcgcgcc gcgcactcct cgacgatacg gccgccatac
       61 atgatcagca cgcggtcgca gaagctggcg acgaccgtca aattgtggct gatgaagatc
      121 agccccatgc cacgctcgcg caccagcgcg tcgaggatgc gcagaacctc gttctggacg
      181 gtgacgtcga gggccgaggt cggctcgtcg gcgatcagca ggtccggctc ggcgatcagc
      241 atcatggcga tcatgacgcg ctggcccatg ccgccggaga gctggtgcgg gtagaggtgg
      301 gagaccagct cggggtcgcg gatctgcacc gcctcgagca tcgcgagcgt ccgcttgcgc
      361 gcgtcggccc ggctggtccg caaatgcagg aagcaggtct cgctgatctg ccggccaacc
      421 gtctgcaccg ggttcaacga gtatttcggg tcctgcatca ccatcgacag ccgccggccg
      481 cgtagcttct gccaatcgcg ctcgctacac gccagcaggt ccctgccctc gtacgacatg
      541 gtttttgcgg tgacgatgcc ggggcgcggc acgaggccga gcagcgcccg gccggtggtc
      601 gatttgcccg agccggattc gccgacgatg cccagccgtt cgcggccgag cgtgaacgag
      661 gcgttgcgca ccgcgcgggt agccccggtg cggccgggaa aggtcacctc gaggtcttcg
      721 acgatgagca gcgggtcact catccggact tggggtcgaa aacgtcgcgc aggccgtcgc
      781 ccaacaggtt gaaaccgagg ctgacgacga agatcgccac gcccgggata gtggcgaccc
      841 accactggtc gaggatgacg tcgcggccgg atgagaccat ggcgccccac tcggcggtcg
      901 ggggctgcgc cccgaggccg aggaagccga gcccggccgc cgtcaggatg atgccagcca
      961 tgtcgagcgt cagccgcacg atgaccgaac tgaggcagag cggcacgatg tgacggaaca
     1021 ggatgcgcca ggtcgaggcg ccctcgagca ccaccgcctg gatgaaatcg ctgcgggcga
     1081 tcgccatggt ctcggagcgc gcgatgcgcg catagggcgg ccacgccgta agcgcgatgg
     1141 cgatgaccgc gttgttgatg cccggcccca gcgcggcggc gaaggccagc gccagcacca
     1201 gccgcggaaa ggcgaggaac acgtcggtga tgcgcatcag caccgcatcg acccagccgc
     1261 cgagatagcc ggcgacggta cctaccgcga ggccgatggg cgcgacgagc accgagacga
     1321 gggcgacgat cgtcagggtg acccgggcgc cgtagagggt gcgggcgaag atgtcgcggc
     1381 cgagctcgtc ggtgccgaac cagtgccccg ccgagggcgc cgcaagccgg ccggccaggt
     1441 cctggtcgag cggcgactgg cccagcgaca gccatggcgc gaagatcgcc atcaggatca
     1501 gcgcggtgac gatcaccatg ccgacgacgg ccgtcgggtt gcgcaggatc gagcgaaagg
     1561 cgcgatagaa gctgccgaac gccgcctgcc gccgcgaggt cggcgcttcg ctcgtcagcc
     1621 actgcccgag ggtgtcggtc acgatgtcct caaccgcggg tcgaagagct tgtagagcag
     1681 gtcgcagatc aggttgacgc cgatgaagac ggtgccgacg accaccgttc ccccgagtac
     1741 ggcgttcatg tcgctgttga acagcgcgtg ggtgatgtag agcccgagcc ccggccaggc
     1801 gaaaacggtc tcggtcagca ccgcgccttc cagcagcgag gcatagctca ggccgatcac
     1861 ggtaacgagc ggcaccatga tgttggggaa cgcatggcgc cagacggtgc cccagaacga
     1921 gttgcccttg atgcgggcgg cggtgacgta ttcctggctc aactgctcga tcatgaagct
     1981 gcgcgtcatg cgcgcgatgt aggccagtga ataatagccc aggatgccgg ccggcaggat
     2041 gaggtggccg aaggcattcc agaacatgtc ccattcgccc tggatcgccg cgtcaacgag
     2101 cacgatgccg gtgatcggcg tcatcgtcgc ctggtagacg acgtcgagcc ggcccggccc
     2161 cgcgacccag ccaagctcgc cgtagaacac gaagaggccg accagcccga gccagaacac
     2221 cggcaccgaa tagccg
//
LOCUS       DATAZA010000190         2257 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3037937, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000190 DATAZA010000000
VERSION     DATAZA010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2257
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3037937"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(155..580)
                     /gene="rplQ"
                     /locus_tag="VHZ56_04910"
     CDS             complement(155..580)
                     /gene="rplQ"
                     /locus_tag="VHZ56_04910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEX4297340.1"
                     /translation="MRHGNTNRKLSRTASHRKAMFANMSAALIKHEQIVTTLPKAKEL
                     RPIVEKLVTLGKRGDLHARRQAIAQVRDETQVQKLFGVIGPRYKDRQGGYIRILKAGF
                     RYGDNAAVAVIEFVDRDTTAKGQDSGPVQEKREDADVAA"
     gene            complement(634..1653)
                     /locus_tag="VHZ56_04915"
     CDS             complement(634..1653)
                     /locus_tag="VHZ56_04915"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009341032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEX4297341.1"
                     /translation="MTIQRNWQELIKPTKLEFVSGSDNARVSSVVAEPLERGYGLTLG
                     NALRRVLLSSLQGAAVTAIQIDGILHEFSSLPGVREDITDLVLNVKEIALKMGGEGPK
                     RLMLNKQGPGAVTAGDIKVTGDIEVLNPELVICHLDDGAEINIEFTVNTGKGYVAADK
                     NRPEDAPIGYIPVDSLFSPVRRVSYKVDATRAGESLDKDKLTLTVETNGGISPEDAVA
                     YAARILQDQLSVFVNFEEPTKEKSQESVPELAFNPALLKKVDELELSVRSANCLKNDN
                     IVYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVLAQMGLHLGMDVPNWPPENIDDLAKR
                     YEDHY"
     gene            complement(1749..2141)
                     /gene="rpsK"
                     /locus_tag="VHZ56_04920"
     CDS             complement(1749..2141)
                     /gene="rpsK"
                     /locus_tag="VHZ56_04920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018065590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEX4297342.1"
                     /translation="MAKPETVRVKRKERKNITSGVAHVNASFNNTMVTITDVQGNTIS
                     WSSSGVMGFKGSRKSTPYAAQVAAEDAAKKAQEHGMKTLEVEVRGPGSGRESALRALQ
                     AAGFNVTSIRDVTTIPHNGCRPRKRRRV"
BASE COUNT          338 a          709 c          736 g          474 t
ORIGIN      
        1 gcgatagccc tgcggatgct ggagccgccg gtcttgggga cgtggatgaa ggcaaattgg
       61 tgcgggtcgc tgatcagcac gtccggcacc aaaaacgaaa gggcgaccct ccagccagag
      121 gatcgccctt aaatttcagc atcggccggc cggcttaggc ggcgacgtcg gcgtcttcgc
      181 gcttttcctg caccgggccc gaatcctggc ccttggcggt ggtgtcgcga tcgacgaatt
      241 cgatcaccgc cactgcggcg ttgtcgccgt agcggaagcc ggccttgagg atgcggatat
      301 agccaccctg gcggtccttg tagcgcgggc cgatgacccc gaagagcttc tgcacctggg
      361 tctcgtcgcg cacctgcgcg atcgcctgcc ggcgggcgtg cagatcgccg cgcttgccca
      421 acgtcaccag cttctcgacg atcggccgca gttccttggc cttgggcaag gtggtcacga
      481 tctgctcatg cttgatgagc gccgccgaca tgttggcgaa catcgccttg cggtggctcg
      541 cggtccggct cagcttccgg ttggtgttcc cgtggcgcat ttcttactcc ctggcggcta
      601 cgtcttccga cggtccgctg gccaattggc cgcttagtag tgatcttcgt agcgtttggc
      661 cagatcgtcg atattctccg gcggccagtt cgggacgtcc atgcccagat ggaggcccat
      721 ctgcgccagc acttccttga tctcattgag cgatttgcgc ccgaaattcg gggtgcgcag
      781 catctcggcc tcggtcttct ggatgaggtc gccgatgtag acgatgttgt cgttcttcag
      841 gcagttggcc gagcggaccg aaagctcgag ttcgtcgacc ttcttgagca gcgccggatt
      901 gaaggccagc tcgggtaccg attcctggct cttttccttg gtcggctcct cgaagttcac
      961 gaacaccgag agctggtcct gcaggatgcg ggcggcgtag gccacggcgt cctcgggcga
     1021 gatgccgcca ttggtctcga cggtcagcgt cagcttgtcc ttgtcgaggc tttcgccggc
     1081 gcgggtggcg tcgaccttgt aggagacgcg gcggacgggc gagaacagcg aatccaccgg
     1141 gatatagccg atgggtgcgt cttccggccg gttcttgtcg gcggcaacgt agcccttgcc
     1201 ggtattgacg gtaaactcga tgttgatctc ggcgccgtcg tcgaggtggc agatcaccag
     1261 ctcggggttg agcacttcga tgtcgccggt gaccttgatg tcgccggcgg tcacggcgcc
     1321 cgggccctgc ttgttcagca tcaggcgctt ggggccctcg ccgcccatct tgagggcgat
     1381 ttccttgacg ttcagcacga ggtcggtgat gtcctcgcgc acgccgggca gcgacgagaa
     1441 ttcatgcagg atgccgtcga tctggatggc ggtcaccgcc gcgccctgca gcgaggacag
     1501 cagcacgcgc cgcagcgcgt tgcccagggt cagtccgtag ccgcgctcca gcggttcggc
     1561 cacgaccgaa gacacgcgcg cgttgtcgct gcccgaaaca aactccagct tggtcggctt
     1621 aatcagctct tgccagttcc tctggatggt cacggtaacg tcctttcaaa agtgcggcgc
     1681 tcgcccgccg ctcggccgca agtaccaaat gggcagcgcc cgccagcggc gggttgcccc
     1741 aaacgcggtt agacgcggcg gcgcttgcgc ggccggcagc cattgtgggg gatggtcgtc
     1801 acgtcgcgga tggacgtgac gttgaacccg gctgcctgaa gcgcacggag cgccgattca
     1861 cggcccgagc ccggaccgcg cacttcgacc tcgagggtct tcatgccgtg ttcctgggcc
     1921 ttcttggccg catcttccgc cgccacctgg gcagcgtagg gggtcgactt gcgcgacccc
     1981 ttgaacccca tgacgcccga cgacgaccag gaaatggtgt tcccctggac gtcggtgatg
     2041 gtcaccatgg tgttgttgaa gctggcgttc acatgcgcga cgccggaggt gatgttcttg
     2101 cgttccttgc gcttgacgcg caccgtttct ggcttagcca attttcatcc tttgtttcga
     2161 tatcggcgct gccgtaattc cagcagctac atcagggcag cgaggaggtg cctcgcgacc
     2221 ccggttactt cttcttgccg gcgatcggct tggccgg
//
LOCUS       DATAZA010000191         2461 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1180673, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000191 DATAZA010000000
VERSION     DATAZA010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2461
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1180673"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..561)
                     /locus_tag="VHZ56_04925"
     CDS             complement(<1..561)
                     /locus_tag="VHZ56_04925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003535860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX4297343.1"
                     /translation="MSNRQNVAPNDLSAFWMPFTANRQFKKAPRMFVRAKDMYYTTSD
                     GRDVLDGTAGLWCVNAGHCRPRIVEAIAEQAAEMDYAPAFQMGHPKAFELANAVVGVA
                     PEGLNHVLYTNSGSESVETALKVALAYHRVKGEGSRFRLIGRERGYHGVNFGGISVGG
                     IVTNRKMFGTLLTGVDHLPHTHTPGKN"
     gene            717..1376
                     /locus_tag="VHZ56_04930"
     CDS             717..1376
                     /locus_tag="VHZ56_04930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013894611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator C-terminal
                     domain-containing protein"
                     /protein_id="HEX4297344.1"
                     /translation="MPVPTKARPQTRIQREKQDVILEAALDVFSVQGFRGATIDQIAE
                     AAGMSKPNLLYYFSSKEEIHKRLLDEMLGLWLAPLHELDAAGDPMPELRSYIRRKLEM
                     ARDFPRQSRLFANEMLQGAPHAIEVLEGELRALVDAKAKVIESWMDQGKLARTDPYHL
                     IFSIWATTQHYADFDVQVRAVLGRDRGGEGRFEDAARYLENLFMDGLKPKVAQAGSAQ
                     F"
     gene            1443..1877
                     /locus_tag="VHZ56_04935"
     CDS             1443..1877
                     /locus_tag="VHZ56_04935"
                     /inference="COORDINATES: protein motif:HMM:NF014045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEX4297345.1"
                     /translation="MGTALLIDAENVSTVFWPQMLQQVGRKCRPVGKVFADFASGRCK
                     QWREIAEQEGFALVMRPGGSNATDIAIAIAAMELRQTGQFDTFYLASSDRDYTPLVER
                     LRSDGLIVVGLGEAKAPSTLRAACSRFVVLKKRQTPTLAKAA"
     gene            complement(1874..2242)
                     /locus_tag="VHZ56_04940"
     CDS             complement(1874..2242)
                     /locus_tag="VHZ56_04940"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEX4297346.1"
                     /translation="MTLTIALIVVGRFLLGLMFVIAGVRNFMRLEERFGGKTNYGFAL
                     PRPAIVVGFAVQLVGGLSVALGLFPLWGALALIAFTILATAFYHNLFLFRGKEQEPHI
                     YFVTVNLALCGAFLLVIALA"
     gene            complement(2313..>2461)
                     /locus_tag="VHZ56_04945"
     CDS             complement(2313..>2461)
                     /locus_tag="VHZ56_04945"
                     /EC_number="1.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181985.1"
                     /note="NADH-dependent; catalyzes the conversion of
                     pyrimidines to 5,6-dihydro compounds in pyrimidine
                     degradation; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-dependent dihydropyrimidine dehydrogenase
                     subunit PreA"
                     /protein_id="HEX4297347.1"
                     /translation="PVEDCITMEQLAPGTIDERTGRVVTGKYANWTTHPNNPMRKDAV
                     EPAE"
BASE COUNT          453 a          745 c          862 g          401 t
ORIGIN      
        1 gttcttgccg ggcgtgtggg tgtgcggcag gtggtcgacg ccggtcaaaa gcgtgccgaa
       61 catcttgcgg ttggtgacga tgccgcccac cgagatgccg ccgaaattga cgccgtggta
      121 gccgcgctcg cggccgatga gacggaagcg gctgccctcg cccttcaccc ggtggtaggc
      181 gagcgccacc ttgagggcgg tctcgaccga ttccgagccg gaattggtat agagcacgtg
      241 gttgagcccc tcgggggcga cgccgacgac ggcattggcg agctcgaagg ccttggggtg
      301 gcccatctgg aaggccgggg cgtagtccat ctcggccgcc tgctcggcga tcgcctcgac
      361 gatccgggga cggcagtgac cggcgttgac gcaccaaagg ccggcggtgc cgtcgaggac
      421 gtcgcgaccg tccgaggtgg tgtagtacat gtccttggcg cgcacgaaca tgcgcggcgc
      481 cttcttgaac tggcggttgg ccgtgaacgg catccagaaa gcgctgagat cgttcggcgc
      541 gacgttttgg cggttggaca ccggcagctc cttgacttgc ggcccggcca gattggcact
      601 tgacggggca aaccggtttg cccagaaatt tgaccagttg gaaaaaacgt tagcactccc
      661 gcggtgccga tcaaggtgaa aatgctggcg cgcaaggcct ccggagaacg tcgctgatgc
      721 cggtgccgac caaggcgcga ccgcagacgc gcatccagcg cgagaagcag gacgtcatcc
      781 tcgaggcggc gctcgacgtg ttctcggtgc agggcttccg cggcgccacg atcgaccaga
      841 tcgccgaggc ggcggggatg agcaagccga acctgctcta ctatttctcg agcaaggaag
      901 agatccacaa gcggctgctc gacgagatgc tcgggctgtg gctggcgccg ctgcacgaac
      961 tggacgccgc cggcgacccg atgccggaac tgcggtccta catccgccgc aagctcgaga
     1021 tggcgcgcga cttcccgcgg cagagccggc tgttcgccaa cgagatgctg cagggcgccc
     1081 cgcatgccat cgaggtgctg gagggtgaac tcagggcact ggtcgacgcc aaggcgaagg
     1141 tgatcgagag ctggatggac cagggcaagc tcgcccgcac cgacccctac cacctgatct
     1201 tttcgatctg ggcgacgacg cagcactacg ccgatttcga cgtgcaggtg cgggcggttc
     1261 tcgggcgcga ccgcggcggc gaaggccgct tcgaggacgc cgcgcggtat ctcgagaacc
     1321 tgttcatgga cgggctgaag ccgaaggtgg cacaggccgg atcggcacaa ttttaggcaa
     1381 gcgcgtagcg atggcttgat tgtcggctgc gatgctccgg gtttcaccag gagtcaccac
     1441 cgatgggcac tgccctcctc atcgacgccg agaatgtgag caccgtcttc tggccgcaaa
     1501 tgctgcagca ggtgggccgc aagtgccgcc cagtcggtaa agtgttcgcc gattttgcca
     1561 gcggccgttg caagcagtgg cgcgagatcg cggagcaaga aggtttcgca ctggtcatgc
     1621 ggccaggtgg aagcaacgcc actgacatcg ctatcgctat cgcggcgatg gagctcaggc
     1681 agaccggtca attcgacacg ttctatctcg cgtcgtccga tcgcgattat accccattgg
     1741 tcgagcggct gcggagcgac ggactgatcg tggtgggcct cggcgaggcc aaggcgccgt
     1801 cgacgctgcg tgcggcctgc tcgaggtttg tagtgctgaa gaaacgacag acccctacgc
     1861 ttgcgaaggc cgcctaagcg agcgcgatga ccagcaggaa ggcgccgcag agcgcgaggt
     1921 tgacggtcac gaagtagata tgcggttcct gctccttgcc gcggaacagg aagaggttgt
     1981 ggtagaacgc cgttgcgagg atggtgaagg cgatcagcgc cagcgcgccc cacagcggga
     2041 agagcccgag cgccaccgac aggccgccga ccaactgcac ggcaaagccg acgacaatgg
     2101 ccgggcgggg cagcgcgaag ccgtaattgg tcttgccgcc gaagcgctcc tcgagccgca
     2161 tgaaattgcg gacgccggcg atgacgaaca tcagcccgag caggaagcgg ccaacaacga
     2221 taagcgcgat ggtcagggtc atggatcagt ccagcttggc gagagcgcgg ctgcgctcgg
     2281 catgtcgcgc cctcgagggg aacacgggcg gcctactccg ccggctcgac cgcatccttg
     2341 cgcatcggat tgttggggtg ggtggtccag ttggcgtatt tgccggtgac gacgcggccg
     2401 gtacgctcgt cgatcgtgcc cggggccagc tgctccatgg taatgcagtc ctcgaccggg
     2461 c
//
LOCUS       DATAZA010000192         5711 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1876822, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000192 DATAZA010000000
VERSION     DATAZA010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5711
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1876822"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..430
                     /locus_tag="VHZ56_04950"
     CDS             <1..430
                     /locus_tag="VHZ56_04950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="flagellar motor protein MotA"
                     /protein_id="HEX4297348.1"
                     /translation="GTAFSASLLGLSGSLILGFLDLQTSQAQNAFYTDLEDWMTSMTE
                     LDHPMTQMQATGLGLPGEEMSAMIERLGSTMQNTDSSQNAIRAMAELARGIDGLVKHI
                     RAEQADLRIHIEEQGDTNKKLRELIEAMLREDQGTSGRPN"
     gene            478..1506
                     /locus_tag="VHZ56_04955"
     CDS             478..1506
                     /locus_tag="VHZ56_04955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008551564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan -binding protein"
                     /protein_id="HEX4297349.1"
                     /translation="MASLSRTRRSQVTNYWPGFVDALSSLLLVIIFLLSLFMLTQFFL
                     GQELQGKDTAMTKLNSQIAQLTDLLQMERSSNTDLQGNLSALQATLGTATAERDKLQA
                     QVTGLGAGDGDKDVKIAGLTSDLAKEKDISSDAAAQVALLNQQLSALRTQIGALETAL
                     DASDAKVTDSKTQIADLGSRLNVALAQRVQDLSQYRSDFFGRLRQILEGRADIQVVGD
                     RFVFQSEVLFPAGEATVSDDGKAELDKLADAIKQLEGEIPPDINWVLRIDGHTDKRPI
                     NTPEFPSNWELSAARAIAVAKYLVNDGVDEAHLVPAGFGDSHPLDPADTDEAYAKNRR
                     IEFKLTDG"
     gene            complement(1543..3378)
                     /locus_tag="VHZ56_04960"
     CDS             complement(1543..3378)
                     /locus_tag="VHZ56_04960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008128118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HEX4297350.1"
                     /translation="MRIPTTKTGSDLPLSPRARREKDRGRRLEFGPLRRLLPFVLRYK
                     GRLALTVVFLLISTFSNLALPAIAGKAIDLGFLAHNLSMVSNYGGLIVLVAAIMAIAS
                     AARFYFISLLGERVLTDLRRSVFDHLLSLDAAFFDTHRVGELTSRLTGDVATIRSVIG
                     SSLSMTLRAGVTMVGALILMFFTSPWLSIGVVIVAPAIMVPVLLISRRLRRMSRRTQD
                     ALAEMSAMATEALGATRTVRSFVQEPVQSRLYGDRAEQSFNAEVSRLGARAALIAGVM
                     FTTTGALVLLLWWGSRAVFLGEVTAGQLAQFMIYALMATNALQSVSDILGTLQTVAGA
                     TERLMEILDTKSSLPVRTDPLRLPEPFSGNVAFDHVNFAYSTRDDVIVRDLSFTVERG
                     ETVALVGPSGAGKSTVFSLVQRFYDVLGGRISVSGIDIRDLDPAELRRHFAYVEQEPT
                     VFAGTIAENIRFGRPEATDPEVEAAAKAALVHDFVVELEDGYDSIVGERGIMLSGGQK
                     QRLAIARAILKDAPVLLLDEATSALDAESERLVQIALERLMENRTTLVIAHRLATIRD
                     ADRILVLDKGRLIDQGSHDELVRKGGRYAELARLQFRIEAQPAAE"
     gene            3537..3758
                     /gene="rpmE"
                     /locus_tag="VHZ56_04965"
     CDS             3537..3758
                     /gene="rpmE"
                     /locus_tag="VHZ56_04965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010912060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HEX4297351.1"
                     /translation="MKKEIHPDYHTITVAMTDGTTYQTRSTYGKEGDTLQLDIDPKTH
                     PAWTGVQGNLLDRGGRVSRFKERFKGLGI"
     gene            complement(3824..4348)
                     /locus_tag="VHZ56_04970"
     CDS             complement(3824..4348)
                     /locus_tag="VHZ56_04970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1465 family protein"
                     /protein_id="HEX4297352.1"
                     /translation="MSDPSDKQAVALGPRIVASGGFLVLYREGMALIESVAAYLDGEG
                     RTESRGLSREASFLYATESMRLTTRLMQLASWLLLQRAVNEGEITAENARTEKEKVKF
                     SATPSERGGPGFADLPERLRTYVAEGDRLFERVQQFDRLERGDIAEAAPPAVEGSIGD
                     QLARLRAAFGKLRA"
     gene            complement(4639..5094)
                     /locus_tag="VHZ56_04975"
     CDS             complement(4639..5094)
                     /locus_tag="VHZ56_04975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297353.1"
                     /translation="MTRLASLALAVVFASALIAPVATVTAASAATCGGNCQKPPPPPP
                     PGNTNPPPPGDPGNPFVPPGSSGGPETHDPSLLISCEIKAGSLDLVFRNSGKKTISAG
                     TPIHWKVAETGELGAVSLSKDLPPGGKIDAASLLKAAGLPADHCTSKLL"
     gene            complement(5168..5626)
                     /locus_tag="VHZ56_04980"
     CDS             complement(5168..5626)
                     /locus_tag="VHZ56_04980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297354.1"
                     /translation="MSKLTSLALAALLASSLIVPAAVLAPADAARCIVNVCGVAPPSI
                     PPGNTNPPPPGDPSNPVVPPGGTGSPTTLDPSLLISCEVKDGSTDLIFRNSGKKTISE
                     GMPIRWVVAASGQRGAISLSHDLPPGGKVLAADLLKIAGAAVDTCVSKLL"
BASE COUNT          998 a         1795 c         2031 g          887 t
ORIGIN      
        1 gggcacggcg ttctcggcgt cgctgctcgg tctttcgggc tcgctgatcc tcggttttct
       61 cgacctccag accagccagg cgcagaacgc cttctacacc gacctcgagg actggatgac
      121 ctcgatgacc gagctcgacc atccgatgac gcagatgcag gcgaccggcc tggggctgcc
      181 gggcgaggag atgtcggcga tgatcgagcg cctcggctcg accatgcaga acaccgattc
      241 ctcgcagaac gcgatccgcg ccatggccga actggcgcgc ggcatcgacg gcctggtcaa
      301 gcacatccgg gccgagcagg cggatctgag aatccacatc gaggagcagg gcgacaccaa
      361 caagaagctt cgcgagctga tcgaggcgat gctgcgcgag gaccagggga ccagcggccg
      421 gccgaactaa agccggattt gcctcccaga tgacgccgac aggagaatga tcgcaccatg
      481 gcgtcgctga gccgcacccg ccggtcacag gtgaccaatt actggccggg gttcgtcgac
      541 gcgctgtcgt cgctgctgct ggtgatcatc ttcctgttgt cgctgttcat gctgacgcag
      601 ttcttcctgg ggcaggagct gcagggcaag gacacggcga tgaccaagct caattcgcag
      661 atcgcgcagc tgaccgacct gctgcagatg gagcgcagca gcaacaccga tctgcagggc
      721 aatctgtcgg cgctgcaggc gacgctcggc acggcgacgg ccgagcgcga caagctgcag
      781 gcgcaggtga cggggctggg agccggcgac ggcgacaagg acgtgaagat cgccgggctc
      841 acgtccgatc tcgccaagga aaaggacatc tccagcgatg ccgcggcgca ggtggcgctg
      901 ctcaaccagc agctgtcggc gctgcgcacg cagatcgggg cgctggagac ggcgctcgat
      961 gcctccgacg ccaaggttac cgacagcaag acgcagatcg ccgacctcgg cagccgcctc
     1021 aacgtggcgc tggcgcagcg cgtgcaggat ctcagccagt accgctcgga cttcttcggc
     1081 cggctccggc agatcctcga agggcgcgcc gacatccagg tggtgggcga ccgcttcgtg
     1141 ttccagtcgg aagtgctgtt cccggcgggc gaggcgacgg tctccgacga cggcaaggcc
     1201 gagctcgaca agcttgccga tgccatcaag cagctcgagg gcgagatccc gcccgacatc
     1261 aactgggtgc tgcgcatcga cggccacacc gacaagcggc cgatcaatac gccggagttc
     1321 ccctcgaact gggagctgag cgcggcgcgc gccatcgccg tcgccaagta tctcgtcaat
     1381 gacggggtgg acgaggcgca tctggtgccg gccgggttcg gcgacagcca cccgctcgac
     1441 ccggcggaca ccgacgaggc ctacgccaag aaccggcgca tcgagttcaa gctgacggac
     1501 gggtgatcgc agggctatcg cccggcccct ggagcggcgc tcttactcgg ccgcgggctg
     1561 ggcttcgatg cggaactgca ggcgggcgag ctcggcgtag cggccgccct tgcgcaccag
     1621 ctcgtcgtgg ctgccctggt cgatcagccg gcccttgtcg agcaccagga tgcggtcggc
     1681 atcgcggatg gtggcgaggc ggtgggcgat caccagcgtg gtgcgatttt ccatcagccg
     1741 ctcgagcgcg atctgcacca gccgttcgct ttcggcatcg agtgccgagg tcgcctcgtc
     1801 gagcagcagc accggcgcgt ccttgaggat ggcgcgggcg atggcgagcc gctgcttctg
     1861 gccgcccgac agcatgatgc cgcgttcgcc gacgatcgaa tcgtagccgt cctcgagttc
     1921 gacgacgaag tcgtggacga gggcggcctt ggctgccgcc tcgacctcgg ggtcggtggc
     1981 ctcggggcgg ccgaagcgga tgttttctgc gatggtgccg gcaaacaccg tcggctcctg
     2041 ctcgacgtag gcgaagtgcc ggcggagttc ggccggatcg aggtcgcgga tgtcgatgcc
     2101 actgacgctg atacggcccc ccagcacgtc gtagaagcgc tggacgagcg agaaaaccgt
     2161 ggatttgccg gcgcccgacg ggccgaccag ggcaacggtc tcgccgcgct cgacggtgaa
     2221 gctcaggtcg cggacgatga catcgtcacg ggtgctgtag gcgaagttga cgtggtcgaa
     2281 cgcgacattg ccgctgaacg gctcgggcag gcgcaggggg tcggtacgaa ccggcagcga
     2341 cgatttggtg tcgaggattt ccatcagccg ctcggtggcg ccggccactg tttgcagggt
     2401 cccgaggatg tcggagaccg actgcagcgc gttggtcgcc atcagggcgt agatcatgaa
     2461 ctgcgccagc tggccggcgg tgacctcgcc gaggaacacg gcgcgcgatc cccaccagag
     2521 cagcaggacc agcgcgccgg tggtggtgaa cattaccccg gcgatgagtg ccgcgcgggc
     2581 gccgagacgg ctgacttcgg cgttgaagct ttgctcggcc cggtcgccat agagccgcga
     2641 ctgcaccggc tcctgcacga agctgcggac ggtgcgggtg gcaccgaggg cttcggtcgc
     2701 catcgccgac atctcggcaa gggcatcctg ggtgcgccgc gacatgcggc ggagccggcg
     2761 cgagatgagg aggaccggaa ccatgatggc cggcgccacg atgacgacgc cgatcgacag
     2821 ccaggggctg gtgaagaaca tcaggatgag ggcgccgacc atggtgacgc ccgcccgcag
     2881 cgtcatcgac agcgagctgc cgatcaccga gcggatggtg gcgacatcgc cggtcagccg
     2941 cgaggtcaac tcgccgacgc ggtgggtgtc gaagaacgcc gcgtcgaggc tcagcagatg
     3001 atcgaagacc gagcggcgga gatcggtgag tacgcgttcg cccagcagcg aaatgaagta
     3061 gaaccgggca gcgctggcga tcgccatgat ggcggcgacg aggacgatca gcccgccgta
     3121 gttcgacacc atgctgaggt tgtgggcgag aaagcccaga tcgatcgcct tgccggcaat
     3181 cgccgggagc gccaggttgg aaaaggtcga aatcagcagg aagacgacgg tcagtgccag
     3241 ccggcccttg tagcgcagca cgaacggcag caagcgccgc agcgggccga actcgaggcg
     3301 ccgcccgcgg tccttctcac gcctggcccg cggggagagc ggcaggtccg atccggtttt
     3361 ggtcgtgggt attctcaatg cgagtccggt ataggcagga cgctgcgtcg gggcaaccgg
     3421 tttgccgtgc ggcgcgtggc cccttgtcgg gccggggatt tttctgtaga caccggccca
     3481 atttgccgga tccggctgcg ggcgctgtcg cgcccgtttg atttgaggct tccccgatga
     3541 agaaagaaat ccaccccgat tatcacacga tcaccgtggc gatgaccgac ggcaccacct
     3601 accagacgcg gtcgacgtac ggcaaagagg gcgacaccct gcagctcgat atcgatccga
     3661 agacccatcc ggcgtggacc ggcgtgcagg gcaacctgct cgaccgcggc ggccgcgtgt
     3721 cgcgcttcaa ggagcgcttc aagggcctcg gcatctgagc tggccgtatc gctggatctg
     3781 acgagccccg cttcggcggg gcttttcgtt tcaggttttc gtttcaggcc cgcagcttgc
     3841 cgaaggcggc gcgcagccgg gcgagctggt cgccgatcga gccttcgacg gccggcggag
     3901 cggcctcggc gatgtcgccg cgctccagcc ggtcaaattg ctgcacgcgc tcgaacagcc
     3961 ggtcgccctc ggcgacgtag gttcgcagtc gctccggcag gtcggcgaaa ccggggccgc
     4021 cccgttcgga gggggtggcg gagaacttaa ccttttcctt ttcggtgcgg gcgttctcgg
     4081 cggtgatctc gccctcgttc acagcccgct gcagcagcag ccacgaggcg agctgcatca
     4141 gccgggtggt gagccgcatc gactcggtcg catagaggaa ggacgcctcg cggctgaggc
     4201 cgcggctttc cgtccggccc tcgccgtcga gataggcggc gacgctttcg atcagcgcca
     4261 tgccctcgcg atagagcacc aggaagccgc cggaggcgac gatgcggggc ccgagcgcca
     4321 cggcctgctt gtcggaagga tcgctcatgc tgccaaaccc gctgcgggac gccccggcgt
     4381 cgccggcatg tcaccacgct cggcattgag ggaggcttaa tgaaggcggc ggggcaaaga
     4441 aaaagagccg tcaagactgg cggctctcgg aagttaacag ggaggcgtca aacagaggga
     4501 gaaaaccgct ctgcaaagtc caaactggac agtcatgaaa ttaaccctga aacgttaacc
     4561 ggcagttaac gagtagaact tccgtaacct tgccaagaaa tgaccggcag atctggcacc
     4621 ggccattttt cgcccgactc agaggagctt cgacgtgcag tgatcggctg gcagtccggc
     4681 ggccttcagc aggctcgccg cgtcgatctt gccgccgggc ggcaggtcct tgctcaggct
     4741 gacggcgccg agctcgccgg tctcggcgac cttccagtgg atcggggtgc cggccgagat
     4801 ggtcttcttg ccggagttgc ggaagaccag gtcgaggctg ccggccttga tctcgcagct
     4861 gatcagcagc gagggatcat gggtttccgg gccgcccgaa ctgcccggcg gaacgaacgg
     4921 attgcccggg tcgcccggag gcggcgggtt ggtgttgccg ggaggcggcg gcggcggggg
     4981 tttctgacag ttgccaccgc aagtcgcggc acttgccgcg gtgaccgtcg cgaccggcgc
     5041 aatgagggcc gatgcgaaca cgacagcgag cgcgagggaa gctagtctgg tcatcgaaaa
     5101 tctccttatg agaaccgctt ggaatcgagg cagaccggca ccccgcaagg gcgccggtcc
     5161 gtaaagctca gagaagcttg gacacgcagg tgtcgacggc ggcgccggcg atcttcagca
     5221 ggtcggctgc cagcaccttg ccgccgggag gcaggtcatg gctgaggctg atggcgccgc
     5281 gctggccgct cgcggcgacc acccacctga tcggcatgcc ttcggagatg gtcttcttgc
     5341 cggaattgcg gaagatcagg tccgtgctgc cgtccttgac ctcgcagctg atcagcagcg
     5401 acgggtcgag cgtggtcggg ctgcccgtgc cgcccggcgg gaccaccgga ttggacggat
     5461 cgcccggagg cggcgggttg gtgttgcccg gggggatcga cggcggtgcc acgccgcaga
     5521 cgttgacgat gcagcgggcg gcgtctgccg gcgccaggac cgcggcgggc acgatcaggc
     5581 tcgacgcgag caacgcggcg agggcgaggg aggtgagttt cgacatgatt tgtctccttg
     5641 ggttggcggc cggtagctgc cggtcaaacg cgggcgggtc atatcgtccg tggctggaaa
     5701 ctcgcgccgg g
//
LOCUS       DATAZA010000193         3541 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1876834, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000193 DATAZA010000000
VERSION     DATAZA010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3541
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1876834"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..480)
                     /locus_tag="VHZ56_04985"
     CDS             complement(<1..480)
                     /locus_tag="VHZ56_04985"
                     /inference="COORDINATES: protein motif:HMM:NF012530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-54 factor"
                     /protein_id="HEX4297355.1"
                     /translation="MALSPRLEVRQSQSLTLTPQLMQSIRLLQLSHLELDLFVDAELL
                     RNPLLERDEAAADPADPIDPPAEPAADEDTVDHAERIQDADTIAGAYDTEIDNVFPEQ
                     RGEDRLAGEWTGSGSDGTDAPDIDQYIAARPTLAEHLGVQIGLLLTDPADRLIARFLA
                     "
     gene            complement(599..1354)
                     /gene="lptB"
                     /locus_tag="VHZ56_04990"
     CDS             complement(599..1354)
                     /gene="lptB"
                     /locus_tag="VHZ56_04990"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEX4297356.1"
                     /translation="MSGENDTRVDQTGWLVAHGLGKKFGTRTVVSDVSIAVRRGEAVG
                     LLGPNGAGKTTVFTIIMGLLKPDRGEVRLDGYAITRLPLFQRGRLGIGYLPQEPSIFR
                     GLSVKGNILSVLEAHVHSRQERQRQLDELLVEFGIAHLANVSALALSGGERRRAEIAR
                     AVAGNPVFMLLDEPFAGVDPIAVAEVKSLVRQLTRRGIGVLVTDHSVRETLSLVDRAY
                     LIHDGRVMIQGKPELIAADPEARRVYLGESFSV"
     gene            complement(1351..1821)
                     /locus_tag="VHZ56_04995"
     CDS             complement(1351..1821)
                     /locus_tag="VHZ56_04995"
                     /inference="COORDINATES: protein motif:HMM:NF015901.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptA/OstA family protein"
                     /protein_id="HEX4297357.1"
                     /translation="MRRLRAAAALLALALVCGGAAAATAPNPVKITSDKFVVDDALHI
                     ATFTGSVVVTRTNLTVWAPKVVVDYGATGGSSSIKTMTATGGVRIKTPQEDATGDIAV
                     YDPKSQLLHLSGHVMVTTARGTVGSPALVVDLGTNTSVFSSSKGSRVTGVFTPK"
     gene            complement(1818..2531)
                     /locus_tag="VHZ56_05000"
     CDS             complement(1818..2531)
                     /locus_tag="VHZ56_05000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297358.1"
                     /translation="MAITTADTVDRARILRRLQARNSVVAVLRALVPAFGVLAFLLLA
                     VQLYIANIAKQYGVSGISIDRGNLVVETPQYTGSGLNGARYVVNAREARSPIGSTRFI
                     NMADATLDFFRPGQATFHGSAAAATMDTAANAVDVPGVATVTDSGGLFGTLTTVHSDF
                     KSQLTTAAGPVNLTFPDGATLVAANMRFDGAADLWTFERSTLVIPNLPRAVPFPLPWP
                     TTAPWLLGMGPDTDTGASP"
     gene            complement(2531..3145)
                     /locus_tag="VHZ56_05005"
     CDS             complement(2531..3145)
                     /locus_tag="VHZ56_05005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease H-like domain-containing protein"
                     /protein_id="HEX4297359.1"
                     /translation="MTTRLHRGDLPDLSRYGREVAIDTETMGLDPRRDRLCVVQLSPG
                     DGSADVVQIPADLKTAPNLEKLLADPAVTKIFHYARFDMAVLKHRFGLVTGPVWCTKI
                     ASRLVRTYTDRHGLKDLARELLNVDLNKQQQSSDWGADKISEAQTDYAASDVLYLHDI
                     KRHLDRMLRREGRLALAETCFRFLPARIELDLLGWDEEDIFAHS"
     gene            3311..>3541
                     /locus_tag="VHZ56_05010"
     CDS             3311..>3541
                     /locus_tag="VHZ56_05010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297360.1"
                     /translation="MHDQAAGQRQARDLSYVIGRGALVRRNRIFRLLLSVATPIVVGA
                     LLNIVIYVSLLSRGPRLEAADLRLILPALAAIP"
BASE COUNT          545 a         1087 c         1356 g          553 t
ORIGIN      
        1 ggcgagaaag cgcgcgatca gccggtcggc aggatcggtc agcaagagcc cgatctggac
       61 gccgaggtgc tcggcgaggg tcgggcgggc ggcgatgtac tggtcgatgt cgggggcatc
      121 ggtgccgtcg ctgccgctgc ccgtccactc gccggccagc cggtcctcgc cgcgctgttc
      181 ggggaaaacg ttgtcgattt cggtgtcgta ggcgccggcg atggtgtcgg catcctggat
      241 gcgctcggcg tggtcgaccg tatcctcgtc ggcggccggc tcggcgggcg ggtcgatcgg
      301 gtcggccggg tcggcagccg cctcgtcacg ctcgagcagc ggattgcgca gcagctcggc
      361 gtcaacgaac aggtcgagct cgaggtggct cagctgcagc agccggatgg actgcatcag
      421 ctgcggcgtc agcgtcaggc tctgcgattg ccgaacctcg agccgaggcg acagcgccat
      481 gaatgtcccc gatgtccccg gcgtcgcggg aggcgcggcg cggtcggacc atgccgcatt
      541 cgagcggcct gggcaaggcg tcaagcaaga tgcgtgccaa gggtcgcccg agcggccgct
      601 agaccgagaa gctctcgccc aaatagacac ggcgggcttc cgggtcggca gcgatcagct
      661 cgggcttgcc ctggatcatc acccggccgt cgtggatgag ataggcgcgg tcgaccagcg
      721 acagggtctc gcgcaccgag tggtcggtga cgagcacgcc gatgccgcgg cgggtgagct
      781 ggcggacgag gcttttgacc tcggcgacgg cgatcggatc gacgccggcg aacggctcgt
      841 cgagcagcat gaacaccggg ttgccggcga cggcacgcgc gatctcggcg cggcgtcgct
      901 cgccgcccga gagcgccagc gcgctgacat tggcgaggtg ggcgatgccg aactcgacca
      961 gcagttcgtc gagctggcgc tggcgttcct ggcgcgagtg cacatgcgcc tcgagcacgg
     1021 agaggatgtt gcccttgacg ctcaggccgc gaaagatcga cggctcctgc ggcaggtagc
     1081 cgatgccgag gcggccgcgc tggaacagcg gcagccgggt gatggcatag ccgtcgagcc
     1141 gcacctcgcc gcggtcgggc ttgaggaggc ccatgatgat ggtgaagacg gtggtcttgc
     1201 cggcgccatt ggggccgagc aggccgaccg cctcgccgcg gcgcaccgcg atcgagacgt
     1261 cggagacgac ggtgcgggtg ccgaatttct tgccgagccc gtgcgccacg agccagccgg
     1321 tctggtcgac gcgggtgtcg ttctcgccgc tcatttgggg gtgaacacgc cggtgacgcg
     1381 gctgcccttg ctcgaggaga acaccgaggt gttggtcccg aggtcgacga ccagagccgg
     1441 actgccgacg gtgccgcggg cggtggtcac catgacgtgg ccgctgaggt gcaggagctg
     1501 cgacttgggg tcatagacgg cgatgtcgcc ggtggcatct tcctgggggg tcttgatgcg
     1561 gacgccgccg gtcgcggtca tggtcttgat gctggaggag cctcccgtcg cgccgtagtc
     1621 gacgacgacc ttgggggccc agaccgtgag gttggtgcgg gtgacgacga cgctgccggt
     1681 gaaggtggcg atgtggaggg cgtcgtcgac cacgaacttg tccgaggtga tcttgaccgg
     1741 gttgggcgcc gtcgccgcgg cggcgccgcc acagacgagc gccagcgcga gcagggccgc
     1801 agcggcccgc agccgcctca tggcgacgct cccgtatcgg tgtcggggcc catgccaagc
     1861 agccagggcg cggtcgtcgg ccagggcagc ggaaagggca ccgccctggg caggttggga
     1921 atgaccaggg tcgagcgctc gaaggtccag agatcggccg cgccgtcgaa ccgcatgttg
     1981 gcagcgacca gggtggcgcc gtcggggaag gtgaggttca ccgggccggc ggcggtcgtc
     2041 agctgcgact tgaagtcgga gtggaccgtc gtgagggtgc cgaacaggcc gccgctgtcg
     2101 gtgacggtgg cgacgcccgg gacgtcaacg gcgttggccg cggtatccat cgtcgcggca
     2161 gcggccgagc catggaacgt cgcctggccg ggacggaaga aatccagcgt cgcgtcggcc
     2221 atgttgatga accgggtgct gccgatgggc gagcgggcct cgcgcgcgtt gacgacgtag
     2281 cgcgcgccat tcaggccgga gccggtgtat tgcggggtct cgaccacgag gttgccgcga
     2341 tcgatgctga tgcccgacac gccgtattgc ttggcgatgt tggcgatgta gagctggacg
     2401 gcaagcagca ggaaggccag gacgccgaag gcaggcacca gcgcccgcag cacggcgacg
     2461 acgctgttgc gcgcctgcaa ccgccgcagg atgcgggcgc gatcgacagt atcggcggtg
     2521 gtgatcgcca tcacgagtgg gcgaagatgt cctcttcgtc ccagccgagc aggtcgagct
     2581 cgatgcgggc cggaaggaag cggaagcagg tttcggcgag cgccagccgg ccctcgcgcc
     2641 gcagcatgcg atcgaggtgg cgcttgatgt cgtgcagata gaggacgtcg gaggcggcat
     2701 aatcggtctg cgcctcggag atcttgtcgg ccccccagtc cgagctctgc tgctgcttgt
     2761 tgaggtcgac gttgagcagc tcgcgggcga ggtccttgag gccgtgccgg tcggtgtagg
     2821 tgcgcaccag ccggctggcg atcttggtgc accagacggg gccggtaacg aggccgaagc
     2881 ggtgcttgag caccgccatg tcgaagcggg cgtagtggaa gatcttggtc accgccggat
     2941 cggccagcag cttttcgaga ttcggcgcgg tcttgaggtc ggccggaatc tgcaccacgt
     3001 cggcgctgcc gtcgccgggc gacagctgca ccacgcagag ccggtcgcgg cgtggatcga
     3061 ggcccatggt ctcggtgtcg atcgccacct cccggccgta acgggaaagg tccggcaggt
     3121 cgccgcggtg cagacgggtc gtcatagtgc cccctgaggg tggtgcgtat ggctggtgtg
     3181 ccacagcagg cccataatgg gaagaatggg caagcattgt ggcctatcga aggattccgc
     3241 cgcttgacgg ccaccgccca cggaacctag ctaggcaaga ggcggcgcgg cgccgccggg
     3301 gaagacgctg atgcacgacc aagcggcggg gcagaggcag gcgcgagacc tctcctacgt
     3361 tatcgggcgt ggggcgctgg tgcggcgcaa ccgcatcttt cggttgttgc tctcggtggc
     3421 aacgccgatc gtggtgggcg ccctcctcaa tatcgtcatc tatgtcagcc tgctcagccg
     3481 cggcccaagg ctggaggcag cggatttacg gctgattctg ccggccctcg ccgccattcc
     3541 g
//
LOCUS       DATAZA010000194         2407 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1065577, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000194 DATAZA010000000
VERSION     DATAZA010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2407
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1065577"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VHZ56_05015"
     CDS             <1..192
                     /locus_tag="VHZ56_05015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297361.1"
                     /translation="LAPAAPLPPADEAARVAATDAAFATIAYATTGLAIVSAIVAWFT
                     LERRPGTPATQATATRDGL"
     gene            235..1101
                     /locus_tag="VHZ56_05020"
     CDS             235..1101
                     /locus_tag="VHZ56_05020"
                     /inference="COORDINATES: protein motif:HMM:NF017085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAD domain-containing protein"
                     /protein_id="HEX4297362.1"
                     /translation="MYKFDPRGEPVDVTFRVIAADQLGEALADLERHDDDGRSVVHEA
                     RRRCKKLRGLLRLVRPAFADYDKESAAIRDAAALLSHLRDAEVLRQTVGGLAEDSGDA
                     ALAGIAARLPVAPSVPADDAHLAEFRNRLLAARDRAQHWQLETTGALVLLDGLRQTYR
                     TAARRMARASRTHAPTDFHDWRKACKYHGFHIDLLKRAAPDLLAAELDLVDRLSTLLG
                     RHHDLTVLHEAADRDPDRFGNATEVVTLRAACDGRRSDIETEALDLGRQIFAERPRSL
                     RRRFAAYWKASI"
     gene            1098..1568
                     /locus_tag="VHZ56_05025"
     CDS             1098..1568
                     /locus_tag="VHZ56_05025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HEX4297363.1"
                     /translation="MNPGKAHREIERKFLVVADGWRRRVAHKSHIEQGYLARGRRSTI
                     RVRIKDGKAATLTIKSREPGISRSEFEYRIALKDAKLLLELCGALRIEKHRFEVPQGR
                     LTWEIDVFSGRHDGLVVAEIELPREDYPVRLPVWIGEDVTDDLRYRNSSLVGEG"
     gene            complement(1588..>2407)
                     /locus_tag="VHZ56_05030"
     CDS             complement(1588..>2407)
                     /locus_tag="VHZ56_05030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="beta-L-arabinofuranosidase domain-containing
                     protein"
                     /protein_id="HEX4297364.1"
                     /translation="LYNGALSGLSRDGAHYFYANPLESDGSAERWEWHTCPCCTMNVA
                     RLVASVGGYFLSTSEDGVAFHIYGGMSATERIAGSMVTLRETSNYPSSGDIRIAIDPE
                     APTAFQVKLRVPGWCRGASISVNGQPVATNAENGYVTIDRTWSKGDVVMLDLPMPAER
                     LYAHPGVIMDAGRVALKRGPLVYCVEEADNPGGRVQRLRLPRVAELKSSTRADLFGGT
                     VTLSAKAKAIVESGWDDLYRTEAPGETDATLTALPYYLWANRGHGSMVVWIPEA"
BASE COUNT          401 a          860 c          775 g          371 t
ORIGIN      
        1 ctggcccccg ctgcgcccct gccaccggcc gatgaagccg cgcgcgtcgc cgcgaccgac
       61 gccgccttcg cgaccatcgc ctatgccacg acggggctgg caattgtctc ggcgattgtc
      121 gcctggttca cgctcgagcg gcgccccggt acaccggcca cgcaggcaac ggcgacgcgg
      181 gatggattgt gacagccggt tttgctctca tgtcggcccc agagtgagcc gctcatgtac
      241 aagttcgatc cccggggcga gcccgtcgat gtgaccttcc gggttatcgc cgccgatcag
      301 ctcggcgagg cgctggcgga ccttgaacgc catgatgacg acggacgcag cgtcgtccac
      361 gaggcgcgtc gacgctgcaa gaagctcagg ggattgctgc gtctcgtccg ccctgcgttc
      421 gccgactacg acaaggaaag cgccgccatc cgcgacgccg ccgccctgct ctcgcacctg
      481 cgcgacgccg aggtgctgcg ccagaccgtc ggcggactgg ccgaggacag cggcgacgcc
      541 gcccttgccg gcatcgcggc gcggctgcct gtggcgccgt ccgtgccggc ggacgacgcc
      601 cacctcgccg agttccgcaa ccggttgctc gcggcgcgcg accgggcaca gcactggcag
      661 ctcgaaacga ccggcgcact ggtgctgctc gacggtcttc gccagactta ccgcaccgct
      721 gcaagacgca tggcgcgagc gtcgcgcacg cacgccccca cggacttcca cgactggcgc
      781 aaggcctgca aatatcacgg ctttcacatc gacctgctga agcgcgccgc gcctgacctg
      841 ttggcggcgg aactcgacct cgtcgacagg ctctcgaccc tgcttggccg acaccatgac
      901 ctgacggtgc tgcatgaggc cgccgaccga gatcccgacc gcttcggcaa cgcgactgag
      961 gtggtcacgc tgcgtgccgc ctgcgacgga cgacgcagcg acatcgaaac cgaagcgctc
     1021 gacctcgggc ggcagatctt cgcggagcgc ccccgttcgc ttcgccgccg cttcgccgcc
     1081 tactggaagg caagcatatg aatcccggca aggcgcatcg cgagatcgag cgcaagttcc
     1141 tggtcgtcgc cgacggctgg cgccgccggg tggcgcacaa gtcccacatc gagcaagggt
     1201 atctggcccg aggccgccgc tcgaccatcc gcgtccgcat caaggacggc aaggccgcga
     1261 cgctgaccat caagagccgc gagcccggca tctcgcgctc ggagttcgaa taccgcatcg
     1321 cgctcaagga cgccaagctg ctgctcgagc tgtgcggcgc gctgcggatc gaaaagcacc
     1381 gcttcgaagt gccccaggga cgtctcacct gggagatcga cgtcttcagt ggtcgccacg
     1441 acggcctcgt cgtggccgag atcgagctgc cgcgggaaga ctaccccgtc cgcctgcccg
     1501 tctggatcgg cgaggacgtg accgatgatc tgcgttaccg gaactcgagc cttgttggtg
     1561 aaggctgaag gcaagggccc ggcagcgtca ggcttccggt atccacacga ccatcgagcc
     1621 atgcccacgg ttggcccaga ggtagtaggg cagcgccgtg agcgttgcgt cggtctcgcc
     1681 cggtgcctcg gtccggtaaa ggtcgtccca accgctctcg acgatcgcct tggcctttgc
     1741 gctgagcgtc accgtgccac cgaagagatc ggcgcgcgtc gatgatttga gctccgccac
     1801 gcgcggcagc cgcagccttt gcacccgccc gcccggattg tccgcctcct cgacgcaata
     1861 gaccagcggc ccgcgcttga gcgccacgcg gccggcatcc atgatcacgc ccgggtgcgc
     1921 ataaaggcgc tcggccggca tcggcaggtc gagcatgacg acgtcgccct tgctccacgt
     1981 ccggtcgatc gtgacgtagc cgttctcggc atttgtcgcg acgggctggc cattgaccga
     2041 aatactggcg cccctgcacc agccgggaac gcgcagcttg acctgaaacg ccgttggcgc
     2101 ctcggggtcg atggcgatcc ggatatcgcc ggacgaggga tagttggacg tctcgcgcag
     2161 cgtcaccatc gacccggcga tccgctccgt cgccgacatg ccgccataga tgtgaaacgc
     2221 cactccatct tcggaggtgg agagaaagta gccaccgacg gaggccacga gccgcgccac
     2281 gttcatcgtg cagcacggac aggtgtgcca ctcccaacgc tccgccgaac cgtcgctctc
     2341 gagcgggttg gcgtagaaat agtgcgcacc atcgcgactg agcccactga gcgcgccgtt
     2401 gtagagc
//
LOCUS       DATAZA010000195         4155 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1645305, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000195 DATAZA010000000
VERSION     DATAZA010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4155
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1645305"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..585
                     /locus_tag="VHZ56_05035"
     CDS             <1..585
                     /locus_tag="VHZ56_05035"
                     /inference="COORDINATES: protein motif:HMM:NF014325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HEX4297365.1"
                     /translation="RFGQIVTRLLRAQGYSMTLIDDDPAQIELVKRFGVKVFYGDGGR
                     LDILSAAGAEHAALIVIAVAGGDRILAIAELVRRNFPKARIAARAIDRSHAHQLMALG
                     VDTLERETFRAAISLGEKALVSLGRSPEDARHLAQAFEEHDDRLLQDSYELRDDRDAY
                     IGFVRRSTETLDRVMQADRKATDAQKAGNGDVGA"
     gene            complement(582..2495)
                     /locus_tag="VHZ56_05040"
     CDS             complement(582..2495)
                     /locus_tag="VHZ56_05040"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEX4297366.1"
                     /translation="MSQHWPSLIANLAVVALVMSAWVHGQFVFARRPRALKNAAFGLV
                     TGLGAIASMSLSIQIEPGALFDLRSSLLALAGFFGGPVSAVIAVAIAVSYRLSLGGAA
                     SAGAIGIVTMAALGLLVSFLARRRIRGIVAAIALSLCVGIVSILLANLPGHQVTPRTL
                     ELTLPVAVMNALATMLTSFFLMRQASVERERDLLRAAFIQSQDLRYVKGVDGRYVAVN
                     FALARVTGLNSPDDMVGRTDREVLAPQLANGIMIDDQRLLSTGEGFAEREEQFETGHG
                     PAWYETSKVALRNDDGEIVGLTGVTRDISARKQLEERLRESRDQMGLVLSEMSEGVAM
                     FDGNGVLAYCNAQYRRLFPLTAASRTPGATLASILEAVAATGEQRGIPAERKSEWVAE
                     TAATLNASGDQDIELFDGRWISIRTRPTSDGSALVVASDISRIKEAEQVLLSMTERLK
                     VLATTDGLTSLVNRRAFDESLDAELLRCRRADTPLSLLLVDVDRFKSYNDRYGHPAGD
                     DVLRNVGHCLQGALRRPGDIAARYGGEEFVAILPGTTEDGALFIADGFREALHRLGIR
                     HEGGDKGFVTASVGVATVLEWTGAMSGAEMVALADSALYAAKRAGRDRIVAWGSREME
                     LASTRRGHLSGAA"
     gene            2666..3436
                     /locus_tag="VHZ56_05045"
     CDS             2666..3436
                     /locus_tag="VHZ56_05045"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX4297367.1"
                     /translation="MIDPWFWSVAVATVIIVALSKSGLLGSLSMVGVPMLALVMPARE
                     AAGMLLPLLCVMDLIGVLAFRREVDWRNIRILLTGGLVGTAIGWALWSVITDAEVLLI
                     VGIVTMLFILDAVVPWRRKLAEGEAPSAPWGVFWGGLGGLTSFISHTGGPPVQVYLLP
                     QRLAPNIYSGTTVIFFAVINYTKLVPYYFLGQLSVANLETAAILAPIAIVFMLVGVWA
                     MRRVSAAFFYPFAYVVVFFVAIKLIYDGYLGVFFPGHA"
     gene            complement(3500..3673)
                     /locus_tag="VHZ56_05050"
     CDS             complement(3500..3673)
                     /locus_tag="VHZ56_05050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007008288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF465 domain-containing protein"
                     /protein_id="HEX4297368.1"
                     /translation="MTTEGHIAALERRHKEIERQIEDEMAHLSHDDLTVAALKRRKLE
                     IKDELQKLQAAAA"
     gene            3838..4053
                     /locus_tag="VHZ56_05055"
     CDS             3838..4053
                     /locus_tag="VHZ56_05055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF465 domain-containing protein"
                     /protein_id="HEX4297369.1"
                     /translation="MLPLTREQEAALGLELAAKRQEHADLDAAIHTLAASGLADQMLI
                     QRLKKRKLALKDRIVQLENLLLPDIIA"
BASE COUNT          670 a         1443 c         1336 g          706 t
ORIGIN      
        1 cgcttcggcc agatcgtcac ccgattgctg cgcgcccagg gctattcgat gaccctgatc
       61 gacgatgacc cggcgcagat cgagctggtc aagcgcttcg gtgtaaaggt gttctacggc
      121 gatggcgggc gcctcgacat cctgtcggcg gcgggggccg agcatgccgc gctgatcgtc
      181 atcgccgtgg ccggcggcga ccgcatcctc gccatcgccg agctggttcg ccgcaacttc
      241 cccaaggccc ggatcgccgc ccgcgccatc gatcgcagcc acgcccacca attgatggcg
      301 ctcggcgtcg acaccctgga gcgcgagacc ttccgcgccg ccatcagtct cggcgaaaag
      361 gcgctggtga gcctcggccg ctcgcccgaa gacgcgcggc acctggccca ggccttcgaa
      421 gagcacgacg accgcctgct gcaggattcc tatgagctgc gcgacgaccg cgacgcctat
      481 atcggctttg tccggcgctc gaccgaaacc ctcgaccggg tgatgcaggc cgaccgcaag
      541 gccaccgatg cgcagaaggc cgggaacggc gacgtgggcg cctaggccgc cccgctcaaa
      601 tgcccgcgcc gcgtgctggc aagctccatc tcccgggatc cccaggcgac gatgcggtcc
      661 cggcccgcgc gcttggccgc gtagagcgcg ctgtcggcga gagcgaccat ctcggcgccg
      721 ctcatggcac cggtccactc gaggaccgtg gccacgccga cgcttgccgt gacgaacccc
      781 ttgtcgccgc cctcgtgccg gatgccgagc cgatgcaacg cctcgcggaa gccgtcggcg
      841 atgaacagcg cgccgtcttc ggtcgtgccg ggaaggatcg ccacgaactc ctcgccgcca
      901 tatcgcgcgg cgatgtcgcc cggccgccgc agcgccccct gcaggcaatg gccgacattc
      961 cggagcacat cgtcgccggc cggatggccg tagcggtcgt tgtacgactt gaaccggtcg
     1021 acatcgacga gcaggagact gagcggcgtg tccgcccggc ggcagcgcag caattcggca
     1081 tcgagcgatt catcgaacgc ccggcgattg accaggctgg tgagaccatc cgtcgtcgcc
     1141 agcaccttga gccgctcggt catcgacagc agcacctgct cggcctcctt gatccggctg
     1201 atgtcggagg cgaccacgag ggcggagccg tcgctcgtgg gccgcgtgcg gatactgatc
     1261 cagcgcccgt cgaagagctc gatgtcctgg tcgcccgatg cgttcagcgt cgccgcggtc
     1321 tctgccaccc actcggactt gcgctccgct ggaatgcctc tctgctcgcc ggttgcagcc
     1381 accgcctcga ggatcgatgc gagcgttgcg ccgggggttc gggaagccgc ggtgagcggg
     1441 aaaagccgcc ggtactgcgc gttgcaatag gccagcacac cgttgccatc gaacatcgca
     1501 acgccctccg acatctcgga gagcacgagg cccatctggt cgcggctttc gcgcagccgc
     1561 tcctcgagct gcttgcgcgc cgagatgtcg cgcgtcacgc cggtgagccc gacgatctcg
     1621 ccatcgtcgt tgcgcaacgc caccttggag gtctcgtacc aggcaggtcc atgccccgtc
     1681 tcgaactgct cctcgcgctc ggcgaagcct tcgccggtac tgagcagccg ctggtcgtcg
     1741 atcatgatcc cgtttgccaa ctgcggcgcc agcacctcac ggtcggtgcg acccaccatg
     1801 tcgtccggcg agttcaggcc ggtcacgcgc gccagcgcaa aattgacggc gacgtaccgg
     1861 ccgtcgacgc ctttgacgta ccgcaaatcc tgcgactgga tgaaagccgc tcgcagcagg
     1921 tcgcgctcgc gctcgacgct cgcctgccgc atcaggaaga acgaggtcag catcgtcgcc
     1981 agcgcgttca tcacggcgac cggcagcgtc agctcgaggg ttcgcggcgt gacctgatgc
     2041 ccgggcagat tggcgaggag gatgctcacg attcccacgc agagcgacag cgcgatcgcc
     2101 gcgacaatgc cgcggatgcg ccggcgcgca agaaacgaga ccaggaggcc aagggcggcc
     2161 atggtcacaa tgccgatggc tcccgccgag gcggcgcctc cgaggctcag tctgtagctc
     2221 accgcaatcg ccaccgcgat cactgccgac accggtcctc cgaagaaccc cgccagcgcc
     2281 agcagcgagg accgcaggtc gaacagcgcg ccgggctcga tctggataga cagcgacatc
     2341 gaggcaatgg cgccgagccc cgtcaccagt ccgaacgccg cgttcttcag cgcgcgcggc
     2401 cggcgggcaa agacgaactg gccatgcacc caggccgaca tgaccagggc gactacggcg
     2461 aggttggcga tgagcgacgg ccagtgctgg ctcacttcga accacggggc agattcacgg
     2521 gaggcgccag cctaatccgg caggaggatc acgaaggtta agagcggcct ccggcgtttt
     2581 ccggaggtta acaggcggtc aactccgcct tgacaagccg cggcgtgcgg ccttcgctgc
     2641 cgccgtcccg cccgccgagt ctcccatgat cgatccctgg ttctggtccg tggccgttgc
     2701 caccgtgatc atcgttgcgc tcagcaaatc cggcctgctg ggcagcctca gcatggtcgg
     2761 cgtgccgatg ctggcgctgg tgatgccggc gcgcgaggcg gcgggcatgc tgctgccgct
     2821 gctgtgcgtc atggacctca tcggcgtcct cgccttccgc cgcgaggtcg actggcgcaa
     2881 catccgcatc ctgctgaccg gcgggctggt cggcaccgcc atcggctggg ccctgtggag
     2941 cgtcattacg gacgccgagg tgctgctgat cgtcggcatc gtcacgatgc tgttcattct
     3001 cgacgccgtg gtgccgtggc gaagaaagct tgcggaaggc gaggcaccgt cggcgccgtg
     3061 gggcgtgttc tggggcggcc tcgggggcct caccagcttc atcagccata ccggcggccc
     3121 gccggtgcag gtctacctgc tgccgcagcg gctggctccc aacatctatt ccggcacgac
     3181 ggtgatcttc tttgcggtca tcaactacac caagctggtg ccctactact tcctcggcca
     3241 gctgtcggtc gccaacctcg agaccgccgc catcctcgcg ccgatcgcca tcgtcttcat
     3301 gctggtgggg gtctgggcga tgcgccgcgt ctccgccgcg ttcttttacc ccttcgccta
     3361 cgtcgtggtg ttcttcgttg ccatcaagct gatctacgac ggctatctcg gggtgttctt
     3421 tcccggccat gcgtgagcgg cggaaaatga aacggcccgg ggaggaaccc gggccgaatt
     3481 ctttgccgct tgtgccggct caggccgcag cggcctgcag cttttgcagt tcgtccttga
     3541 tttcgagttt tcggcgcttg agcgcggcca ctgtcaggtc gtcgtggctg agatgagcca
     3601 tttcgtcttc gatctggcgt tcgatttcct tatgccgccg ttcaagggca gcgatatggc
     3661 cttcagtcgt catgacaact cctatcaagc gtttcgaacg aatcgatggt cacaaaaaat
     3721 tcacggcttg tcgaccgcat cgggcgggag tggaaaagct ggtgtaaatc gccctcccga
     3781 tcagttaacg atctggggct gatcgacccg cattcaaggg cgaggcggga tttgggcatg
     3841 ctgccgctca ccagggaaca ggaagccgcg ctcggactgg agctggccgc caagcgccag
     3901 gagcacgccg acctcgacgc cgccatccac accctcgccg cctcgggcct tgccgaccag
     3961 atgctgatcc agcgcctgaa gaagcggaag ctggcgctga aggatcgcat cgtccagctc
     4021 gagaacctgc tgctgccgga cattattgcc tgacgccagc cgggatcacg ttctcgcgac
     4081 cgccggcctt gctgcgctcg ctggtttccg ctacacgccc ggctttccga gggtcgcggc
     4141 atgccgggca agccc
//
LOCUS       DATAZA010000196         3580 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1762108, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000196 DATAZA010000000
VERSION     DATAZA010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3580
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1762108"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1471
                     /locus_tag="VHZ56_05060"
     CDS             <1..1471
                     /locus_tag="VHZ56_05060"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HEX4297370.1"
                     /translation="QLGTPDMRLAKQILFHARLNETAPAIATSAGVASYGVLVRMVDA
                     AVAPLELLDLPRGTPVFLDIRNPLHHVVMMLALALMGLPSASVSSAFSVERAGVLPGV
                     LLTDRDGMALGTIPVRQIDERWFAHDPKSAIDYARLDRLPGFAAPDDIVRYVYSSGTT
                     GFPKCVALTQKVLEERTFHLLLGTVQNRGGAGLLMLPFSTIASVQGIFLALPVGMLLC
                     LPSGTAEGLEMARLFHVSVIALAVMQVRAVLAELGDRAPPPELKMVLVAGAKIPLPLL
                     NETRARLCSNVVTEYGSTEMGSITVGTPALLSRQEGAVGYPRPWVELEVVDDAGHPVP
                     PGQDGIVRARSTELAFYITDGGDRLETIENGWFYPGDVGRILEDGLVVIAGRTSEVIN
                     RGGVIVAPEFVEEVLRLDPLVKDVAVVGVPVGGIDEIWAAIVSEQPFDVQAMAQRAHA
                     RLNEKTPNRILRVEQIPRNEAGKVTRNVLREQLLARLRP"
     gene            complement(1468..1947)
                     /locus_tag="VHZ56_05065"
     CDS             complement(1468..1947)
                     /locus_tag="VHZ56_05065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018326573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297371.1"
                     /translation="MRALLCSLPLLAIGLPVLADDVPQYVDDRSTAVAVIQSFYNAID
                     RKEYARAWSYYADGQGVPKFAAFQQGYATTAAVTVYFGTVTDDGAAGSTYYSVPVSLD
                     ATSTAGRHSYFAGCYTLRLANPAIQAAPPFQPLHIVSGKLGSAKGAGKTFVPKACPS"
     gene            complement(2031..2525)
                     /locus_tag="VHZ56_05070"
     CDS             complement(2031..2525)
                     /locus_tag="VHZ56_05070"
                     /inference="COORDINATES: protein motif:HMM:NF024890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-hand domain-containing protein"
                     /protein_id="HEX4297372.1"
                     /translation="MSISGIGGSSQTYQPPSFASLDTNDDGSISLDELESAAPGGATA
                     TSNTQAQKLFAAMDSNGDGSISADEKTAFDQKVQQHHGGGHHGGGGMAFLAQQLSGSS
                     SDPTTSSTTATSGDGSDNSADGSSDSSDDSVLDMLTQAVSAYSTSNSSSSSDLTNSLL
                     QLAA"
     gene            complement(2747..>3580)
                     /gene="groEL"
                     /locus_tag="VHZ56_05075"
     CDS             complement(2747..>3580)
                     /gene="groEL"
                     /locus_tag="VHZ56_05075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010915432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEX4297373.1"
                     /translation="LKVAAVKAPGFGDRRKAMLEDIAVLTGGQVISEDLGIKLENVGL
                     DMLGTAKRVEISKENTTIVDGAGKKDDIEGRIGQIKAQIEETTSDYDKEKLQERLAKL
                     AGGVAVIKVGGSTEVEVKERKDRVDDALNATRAAVEEGIVAGGGVALLRASNALKAKG
                     ENADQQAGINLVKRALQEPIRQIVQNSGAEGSVVVGKILENASETYGYDAQTGEFGDM
                     IKMGIIDPVKVVRTALQDAASVAGLLITTEAMIAEVPKDAAPAMGGGGGMGGGMGGMD
                     F"
BASE COUNT          524 a         1244 c         1174 g          638 t
ORIGIN      
        1 gcaactggga acacccgata tgcggctcgc caagcagatt cttttccatg cccggctgaa
       61 cgaaacggcc cccgccattg ccacgagcgc cggagtcgcc agctacggcg tcctggtgcg
      121 catggtcgac gccgccgtgg cgccgctcga attgctggac ctgccccgcg gcacgccggt
      181 cttcctcgac atccgaaacc ccctgcacca cgtcgtcatg atgctggcgc tggcgctcat
      241 ggggttgcca tcggcctccg tcagctccgc cttctcggtc gagcgggccg gcgtgcttcc
      301 cggtgtgctg ctcaccgacc gcgacggcat ggcgctcggc accatccccg tccgccagat
      361 cgacgagcgc tggttcgcgc acgatccgaa gtccgccatc gactacgcgc gcctcgaccg
      421 cctgccgggc tttgccgcgc ccgacgacat cgtgcgctac gtctattcgt cgggcaccac
      481 cggctttccc aaatgcgtcg ccctgaccca gaaggtcctg gaagagcgaa ccttccacct
      541 gctgctcggc acggtgcaga accgcggcgg cgcgggactg ctcatgctgc cattctcgac
      601 catcgccagc gtccagggca tcttcctggc gctgccggtc ggcatgctgc tctgcctgcc
      661 ctcggggacc gccgaggggc tcgagatggc gcggctgttc catgtttccg tcatcgccct
      721 cgccgtcatg caggtgcggg cggtcctggc ggaactcggc gaccgcgctc ccccgccgga
      781 actcaagatg gtgctcgtcg ccggggccaa gattccgctg ccgctgctca acgagacgcg
      841 cgccaggctc tgcagcaacg tcgtgaccga atacggctcc accgaaatgg ggtcgatcac
      901 cgtcggcacg ccggcgctgt tgtcccggca ggagggcgcc gtcggctatc ctcggccctg
      961 ggtggagctg gaagtcgtcg acgacgccgg gcatcccgtg ccgccggggc aggacggcat
     1021 cgtgcgcgcg cgctccactg agctggcgtt ctacatcacc gatggcggcg accgcctcga
     1081 gaccatcgag aacggctggt tctatcccgg cgacgtcggc cgcatcctgg aggatggcct
     1141 cgtcgtcatc gccggccgca ccagcgaggt gatcaaccgc ggcggcgtca tcgtcgcccc
     1201 cgaattcgtc gaggaagtcc tgcggctcga tccgctggtc aaggacgtgg cggtcgtcgg
     1261 cgtgccggtc ggcggcatcg acgaaatctg ggccgccatc gtctccgagc agcccttcga
     1321 cgtgcaggcg atggcgcagc gcgcccacgc caggctcaac gagaagacgc ccaaccgcat
     1381 cctccgggtc gagcagatcc cgcgcaacga agccggcaag gtgacgcgca acgtgctgcg
     1441 cgagcagctc ctggcgcggc tgcgtcccta ggacggacag gctttgggca cgaacgtctt
     1501 gccggcgccc ttggccgaac cgagcttgcc gctgacgatg tgcagcggct gaaacggcgg
     1561 cgccgcctgg atcgccgggt tggcgagccg cagcgtgtag cagccggcaa agtagctgtg
     1621 cctgccggcc gtgctggtcg catcgagact gaccggtacg ctgtaatagg tgctgccggc
     1681 ggcgccgtca tcggtcaccg tgccgaaata taccgtcacc gctgcggtgg tcgcgtagcc
     1741 ctgctggaac gccgcgaact tcggcacgcc ctggccatcc gcgtagtacg accacgcccg
     1801 cgcatattcc ttgcggtcga tggcgttgta gaacgactgg atcaccgcga ccgccgtcga
     1861 gcggtcgtcg acatattgcg gcacgtcgtc ggcgaggacc ggcaggccga tggcgagcag
     1921 cggcagggag cagagcaggg cgcgcatcgt cgtctctccg gcagggtcgg gagactgttg
     1981 cgccgttttg gggcggtgtc gaggcgcgcg gcgccccggc accgtattgg ctacgccgcc
     2041 agctgcagca gcgagttggt caggtctgac gacgaagacg agttgctcgt cgaataggcg
     2101 ctcacggcct gcgtcagcat gtcgagcacc gaatcgtcgg agctgtccga gctgccgtcc
     2161 gccgaattgt ccgaaccatc cccgctggtt gcggtcgtcg acgaagtagt tggatccgag
     2221 ctggatcccg acaattgctg cgcgagaaac gccatgccgc cgccaccgtg gtggccgccg
     2281 ccatgatgct gttggacctt ctggtcgaac gccgtcttct cgtcggcgct gatgctgccg
     2341 tcgccattgc tgtccatggc ggcgaagagt ttttgcgcct gggtgttgct ggttgctgtc
     2401 gcgccccccg gcgcggcgga ttccagttcg tcgaggctga tcgagccgtc atcgttggta
     2461 tcgagcgatg caaagctggg tggctggtac gtctgcgacg acccgcctat tccggatatc
     2521 gacattggtt caccttgtag ccgccggaag ggggaacccg gcgcgcgccg agcaggcgcc
     2581 atcatggtaa acgcaagctt aacctttggc gcaacggccc tcgccgcggc gagatttaac
     2641 ggcgcggtaa ggttggtgca aacttcggcc gggctgcaaa cgacaggggc gcggtgttgc
     2701 caccacgccc cgatcgaagt ccgtgactgg gaagtcggga ctaagcctag aagtccatgc
     2761 cacccatgcc gccgcccatg ccgccgccac cgcccatggc gggagccgcg tccttcggca
     2821 cttcggcgat catcgcctcg gtggtgatca gcaggcccgc gaccgatgcc gcgtcctgca
     2881 gcgccgtgcg cacgaccttg accgggtcga tgatgcccat cttgatcatg tcgccgaact
     2941 cgccggtctg cgcgtcgtag ccgtaggtct ccgaggcgtt ctcgaggatc ttgccgacga
     3001 ccaccgagcc ttcggcgccg gagttctgca cgatctggcg gatcggctcc tgcagcgccc
     3061 gcttgacgag gttgatgccg gcctgctggt cggcgttctc gcccttcgcc ttgagcgcgt
     3121 tggaagcgcg cagcagcgcc acgccgccgc cggcgacgat gccttcctcg accgcggcgc
     3181 gggtggcgtt cagcgcgtca tcgacgcggt ccttgcgctc cttgacctcg acctcggtcg
     3241 aaccgccgac cttgatcacc gcgacgccgc cggcgagctt cgccagccgc tcctgcagct
     3301 tctccttgtc gtagtccgag gtggtttcct cgatctgcgc cttgatctgg ccgatgcggc
     3361 cctcgatgtc gtccttcttg ccggcaccgt cgacgatcgt ggtgttctcc ttcgagatct
     3421 ccacgcgctt cgccgtgccc agcatgtcga ggccgacatt ctcgagcttg atgccgagat
     3481 cttccgagat cacctggccg ccggtcagca ccgcgatgtc ctcgagcatg gccttgcggc
     3541 gatcgccgaa gcccggcgcc ttgacggccg cgaccttgag
//
LOCUS       DATAZA010000197         4480 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1529655, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000197 DATAZA010000000
VERSION     DATAZA010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4480)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4480)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4480
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1529655"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(203..1549)
                     /locus_tag="VHZ56_05080"
     CDS             complement(203..1549)
                     /locus_tag="VHZ56_05080"
                     /inference="COORDINATES: protein motif:HMM:NF014051.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEX4297374.1"
                     /translation="MDHNPRSDMRGLLRSGLSKSLVSLAIKVATAGLTYAMYVVLSRT
                     MGVVDYGYFAFGLALATILAIGASMGQQTAILRYWPEAMVAGRRDLALEALRSGGALT
                     IFAGIAVSVALVALSAAGGAISGAPVLHLYASAALVLPLALAEYWSSVLRAQGSVWTA
                     LSPRDIVWRLALPLLVVALWYGGISLSGWGALLLTAAVLALSLGLQYVLAGAQRYEIA
                     AGTAGLRDYWSRHGKASRWFLIGTVLDSAALNMDVIFVGLLIAPAVAGVYFNAFRTAG
                     LLTLFMFAITLVVAPMVAHHYHAGEMKKAQAITALCAWAGFLFSLVVFVGFLLFGDRV
                     MSLFGGSHEQGTLLLVILSVGLLFDAATGPSRIVMMMTGHERQYVRIFGAAIVAGMIV
                     QVPVILAYGAVGAAVVNTLARIAAQLAIAWYSHRRIGLDTTLLGAFMVNSRVDRAA"
     gene            1662..>4480
                     /locus_tag="VHZ56_05085"
     CDS             1662..>4480
                     /locus_tag="VHZ56_05085"
                     /inference="COORDINATES: protein motif:HMM:NF016944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004352 - glutamate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0019551 - glutamate catabolic process to
                     2-oxoglutarate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase domain-containing
                     protein"
                     /protein_id="HEX4297375.1"
                     /translation="MAPVDAVIDTRRGLLERVAVLKETEPNFARFVLATVNAAETEDL
                     SRYSPDILEAMLRKTYTRLGKREDRSHRIFDFDPERPGFPEMLEIFSTDMPFIVDSVL
                     AAIRARGGVLRFMAHPVLHLDPESHRVLDEAAPVSLNESLLIVHIDPIADPEQRAAML
                     AEIDGTLTEVYRATRSWRTMLERLRRVVEDWKLNPPRAPAPMIAESKEFLAWLAEHNF
                     TFLGMREYRLESEGKDARFVPLVTSGIGILEDKDFHFLRAGTDYVEMTEQHLAFIGEP
                     DPLMVTKANVRTRVHRRAHMDYVGVKLYGEGGTVRGELRIVGLFTSMAIATPNTEVPL
                     IRRKVSEVMRRWAYPPGSHAAKALLAALDSYPRDELFQISEDQLFAFAKEIAALADRP
                     RVRVLPRIDRFDNFVSVLVYVPRDRYTSEVRARIGDYLAKLYDGRVSAYYPHFPEGEL
                     VRVHFIIGRNGGRTPRPNRDDLEAAVAGLTLTFGDRLAAAAPEGRDVSGWLGAFSAAY
                     QQRNSAADALADIAVIDRLEGETSLALRLGARTGGDGAYALKVYHRGRPIPLSDRVPM
                     LENFGFRVIDERTYTIEPKGSPACYIHDMVLDVAGNRPDDFAARAPLIEDAILAVWQT
                     EAESDGLNALTLRAGLAWHDVAILRALVRYLRQIGVTWSRAYLAQVLNLHADVAAALV
                     KLFHAELDLNFSGNRERAVAEARDTIMAALDATQSLDEDRIIRRVLNLVEAAVRTNVF
                     QRDGAGNRRPALAVKFDCARIDALPEPRPFREIFVYSPRLEGLHLRFGAIARGGLRWS
                     DRPEDFRTEVLGLVKAQQVKNAIIVPVGAKGAFVPRMMPAGADRETVLREGTACYKIF
                     VQTLLDVTDNLEGDVVLPPPDVRRRDGDDPYLVVAADKGTATFSDTANEIAVSRGYWL
                     GDAFASGGSNGYDHKKMGITAKGAW"
BASE COUNT          729 a         1664 c         1433 g          654 t
ORIGIN      
        1 cctgcgggct cgtgacctcg tgcaccagat gccggtcgat atagatgagc gacgtgccgt
       61 cgggattgtt ggtgaccagg tgatcgtccc agatcttgtc gtacagcgtg cggcccatcg
      121 gcgaaaagtc ccgtgtctca aagcaaaaaa ggggctttgg ccggcccctt cgcggttctt
      181 taggcccgtc gcgcccggcc ggtcaagcgg cccggtcgac ccggctgttg accatgaacg
      241 cccccagcag cgtcgtgtcg agcccgatcc gccggtggct gtaccaggcg atggcgagct
      301 gcgccgcgat ccgcgccagc gtgttgacca ccgccgcgcc cacggccccg taggcgagga
      361 tcaccggcac ctgcacgatc atgcccgcga cgatggcggc cccgaagatg cggacatact
      421 ggcgttcgtg cccggtcatc atcatgacga tgcgcgacgg cccggtggcg gcgtcgaaca
      481 gcagcccgac cgacaggatg accagcagca gcgtgccctg ctcgtggctg ccgccgaaca
      541 gcgacatcac tcggtcgccg aacagcagga agccgacgaa caccaccagc gagaacagga
      601 acccggccca ggcgcagagc gccgtgatcg cctgcgcctt cttcatctcg cccgcatggt
      661 agtggtgcgc caccatcggc gcgacgacca gcgtgatggc gaacatgaag agcgtcagca
      721 ggcccgccgt gcggaaggcg ttgaaataca ccccggcgac ggccggcgcg atcagcagcc
      781 cgacgaagat cacgtccatg ttgagggcgg cgctgtcgag caccgtgccg atgaggaacc
      841 agcggctggc cttgccgtgc cggctccagt agtcgcgcag ccccgccgtg ccggccgcga
      901 tctcgtagcg ctgcgcgccg gcgaggacgt actgcagtcc cagcgacagc gccagcaccg
      961 ccgccgtgag cagcagcgcg ccccagccgc tgaggctgat cccgccatac cacagcgcca
     1021 ccaccagcag cggcagcgcc agccgccaga cgatgtcgcg cggactgagc gccgtccaca
     1081 ccgagccctg cgcccgcagc accgagctcc agtattcggc cagcgccagc ggcaggacga
     1141 gcgccgcgct ggcgtaaaga tgcagcaccg gggcgccgct gattgcgccg ccggcggcgc
     1201 tcagcgccac cagcgccacc gacaccgcga tgccggcgaa gatggtgagc gcgccgcccg
     1261 agcgcagcgc ctcgagcgcc aggtcgcgcc ggccggccac catcgcctcc ggccagtagc
     1321 gcaggatcgc cgtctgctgg cccatgctgg cgccgatggc gaggatggtc gccagcgcca
     1381 gcccgaaggc gaaatagccg tagtcgacga cgcccatggt gcgcgacagc acgacgtaca
     1441 tcgcataggt gagcccggcg gtcgccacct tgatggcgag cgagaccagc gacttgctga
     1501 ggccggagcg cagaagcccc cgcatgtccg agcgcggatt gtggtccatg gcaccccgac
     1561 tatggtccgg attgtcttag aaggtcttac cttccactcg acaatgaagc gggttggccg
     1621 cactgtccgg ccggctgatt tgtcatggtg aagggggccc catggcacct gtggatgccg
     1681 tcatcgacac caggcgcgga ctgctcgagc gggtggcggt gctcaaggag accgagccca
     1741 atttcgcccg tttcgtgctg gccaccgtca acgccgccga aaccgaggat ctgagccgct
     1801 attcgcccga catcctcgag gcgatgctgc gcaagaccta cacgcggctg ggcaagcgcg
     1861 aggaccgctc gcaccgcatc ttcgatttcg accccgagcg tcccggcttc cccgaaatgc
     1921 tcgagatctt ctcgaccgac atgccgttca tcgtcgattc ggtgctggcg gcgatccgcg
     1981 cccggggcgg cgtcctccgc ttcatggccc acccggtgct gcatctcgat cccgaatcgc
     2041 accgcgtgct cgacgaggcg gcacccgtca gcctcaacga gagcctgctg atcgtccaca
     2101 tcgaccccat cgccgacccc gagcagcgcg ccgccatgct cgccgagatc gacggcacgc
     2161 tgaccgaggt gtaccgggcg acccgctcct ggcgcaccat gctcgagcgg ttgcgtcggg
     2221 tggtcgagga ctggaagctc aatccgccac gcgcccccgc gccgatgatc gccgagtcca
     2281 aggaattcct cgcctggctc gccgagcaca atttcacctt cctcggcatg cgcgaatatc
     2341 ggctggagtc cgagggcaag gacgcccgct tcgtgccgct cgtcacctcc ggcatcggca
     2401 tcctcgagga caaggacttt cacttcctgc gggccggcac cgactatgtc gagatgaccg
     2461 agcagcatct ggcgttcatc ggcgagcccg acccgctgat ggtcaccaag gccaatgtgc
     2521 gcacccgcgt ccaccggcgc gcccacatgg actatgtcgg cgtcaagctc tacggcgagg
     2581 gcggcacggt gcgcggcgag ttgcgcatcg tcggcctgtt cacgtcgatg gcgatcgcca
     2641 ccccgaacac cgaggtgccg ctgatccgcc gcaaggtctc cgaggtgatg cggcgctggg
     2701 cctatccgcc cggcagccac gccgccaagg cgctgctggc ggcgctcgat tcctacccgc
     2761 gcgacgagct gttccagatt tccgaggacc agctgttcgc cttcgccaag gagatcgcgg
     2821 cgctcgccga ccgcccgcgt gtccgcgtcc tgccgcgcat cgaccgcttc gacaatttcg
     2881 tctcggtgct cgtctacgtg ccgcgcgacc gctacacctc cgaggtccgg gcccgcatcg
     2941 gcgactatct cgccaagctg tacgacggcc gcgtctccgc ctactacccg cacttccccg
     3001 aaggcgagct ggtccgcgtc cacttcatca tcggccgcaa tggcggccgc acgccgcgac
     3061 cgaaccgcga cgacctcgag gcggccgtcg ccggcctgac gctgaccttc ggcgaccggc
     3121 tcgccgccgc tgcccccgag ggtcgcgacg tcagcggctg gctcggcgcc ttctcggccg
     3181 cctaccagca gcgcaacagc gccgccgacg cgctcgccga catcgccgtc atcgaccggc
     3241 tcgaaggcga gaccagcctc gcgctgcgcc tcggcgcccg caccgggggc gacggcgcct
     3301 acgcgctgaa ggtctatcac cgcggccggc cgatcccgct cagcgaccgc gtgccgatgc
     3361 tcgagaattt cggcttccgg gtcatcgacg agcgcaccta cacgatcgag ccgaaaggca
     3421 gccccgcctg ctacatccac gacatggtgc tcgacgtcgc cggcaatcgc ccggacgatt
     3481 tcgccgcccg cgcgccgctg atcgaggacg ccatcctcgc cgtctggcag accgaggccg
     3541 agagcgacgg gctcaacgcc ctgaccctgc gcgccggcct cgcctggcac gatgtggcga
     3601 tcctgcgcgc gctggtgcgc tacctgcgcc agatcggcgt cacatggtcg cgcgcctacc
     3661 tcgcgcaggt gctcaacctc cacgccgacg tcgccgcggc gctggtgaaa ctgttccacg
     3721 ccgagctcga cctcaatttt tccggcaacc gcgaacgtgc cgtggccgag gcccgcgaca
     3781 ccatcatggc ggcgctcgat gcgacgcagt cgctcgacga ggaccgcatc atccgccgcg
     3841 tcctcaatct ggtcgaggcg gcagtgcgca ccaacgtctt ccagcgcgac ggcgccggca
     3901 accgcaggcc ggcgctggcg gtgaagttcg attgcgccag gatcgatgca ctgcccgagc
     3961 cgcggccgtt ccgcgagatc ttcgtctatt cgccgcgcct cgagggcctg catctgcgct
     4021 tcggcgccat cgcccgcggc ggcctgcgct ggtccgaccg gccggaggat ttccgcaccg
     4081 aggtgctcgg gctggtgaag gcccagcagg tcaagaacgc gatcatcgtt ccagtcggcg
     4141 ccaagggcgc cttcgtgccg cgcatgatgc cggcgggggc cgaccgcgag accgtgctca
     4201 gggaaggcac cgcctgctac aagatcttcg tccagaccct gctcgacgtc accgacaacc
     4261 tcgagggcga cgtcgtgctg ccgccacccg atgtccgccg ccgcgacggc gacgacccct
     4321 atctcgtcgt cgccgccgac aagggcaccg ccaccttctc cgacaccgcc aacgagatcg
     4381 ccgtgtcgcg cggctactgg ctcggcgacg ccttcgcctc gggcggctcc aacggctacg
     4441 accacaagaa gatggggatc accgccaaag gcgcctggga
//
LOCUS       DATAZA010000198         5568 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_949603, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000198 DATAZA010000000
VERSION     DATAZA010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5568
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_949603"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..983)
                     /locus_tag="VHZ56_05090"
     CDS             complement(<1..983)
                     /locus_tag="VHZ56_05090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HEX4297376.1"
                     /translation="MTQKNRPKTTPKPARQFQVGTLPSREAVLEAMASRPDLDGKRDL
                     AKYFGIHGDMRTPFKVLLKELEGAGFIARTRKAIRRTATLPQVTVLDIPGDADPDNLH
                     AYPAQWDEDEGEKPRVLVTQPRAARVVPAPGDRILARIDAGDGPLPTYTARAMKILDK
                     PRRGQIGIVRIDDGGARLVPVDRKLKEMRIDGADLGDARDGDLVEVATKVSGRLMIPK
                     ASVVAVIGNPQSEGAVSMIAIHNLEIPYRFPASVLKEAETAAEASLKGREDWRHIPLI
                     TIDPPDAKDHDDAVHAEPDTDPNNPGGHIVIVAIADVAAYVRPGSALDREA"
     gene            complement(1090..3696)
                     /gene="topA"
                     /locus_tag="VHZ56_05095"
     CDS             complement(1090..3696)
                     /gene="topA"
                     /locus_tag="VHZ56_05095"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018066740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEX4297377.1"
                     /translation="MKLVVVESPAKAKTINKYLGKDYEVLASYGHVRDLPAKDGSVLP
                     DDDFAMIWEVDTASKKRLSDIGNALKDADELILATDPDREGEAISWHVLDVLKQKKLV
                     KDKPVSRVVFNAITKNAITEAMKHPRQIDEPLVDAYLARRALDYLVGFTLSPILWRKL
                     PGSRSAGRVQSVALRIVCDRETEIEKFRPVEYWSVDAKLVEKGKGFEARLYSVDGKVA
                     DKLEVKSGEDAGRLKSAIESGRFEVRSVDKKPTRRNPYAPFTTSSLQQDASSRLGLSP
                     SRTMQIAQRLYEDGVITYMRTDGIDMAPEAIAAARSAIEKEFGSAYLPPTPRIYQNKA
                     KNAQEAHEAIRPTDMFRHPETLGDPDQKKLYGLIWRRTLACQMRPAEIERTTADIAVN
                     APGRDLVLRAVGSVVTFPGFLAVYGVAAKEDRPEDEDDEDSRELPPLAVGDTPRLEEA
                     LIEQHFTQPPPRYSEASLIKKMEELGIGRPSTYAATISVLQDRNYVRLEKRALIPEDR
                     GRIVTAFLENFFKKLVEYGFTAGLEEKLDEISAGELGWKVVLRDFWDDFTRQTDEIKD
                     LRVSEVLDALNETLADHIFPAKADGSDPRRCPNCGTGQLSLKLGKFGAFIGCSNYPEC
                     RYTMQLSDAAAGGADAAPAGDGILGVDEETGLNVLLKSGRFGPYVQLGDGDEPKRSSL
                     PKGWSPDSLTLEKALQLLALPRAVGLHPETGKPISAGIGRYGPFVLHEGTYANLPDVE
                     EVFSVGLNRAVDLLAQKAAGGGRFGKNRAPIAAIKSFEHADGLISVRDGRYGPYVNQG
                     KVNATLPKTLKPEDVTLEQALELIAERAGKSGTRKPARKAAAKAPAKKAAPKKPAAKK
                     AASTKSKKVVEA"
     gene            complement(3814..4938)
                     /gene="dprA"
                     /locus_tag="VHZ56_05100"
     CDS             complement(3814..4938)
                     /gene="dprA"
                     /locus_tag="VHZ56_05100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008875947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HEX4297378.1"
                     /translation="MARATGTSLTPSQKIAWLRLIRTDNVGPVTFRQLINRTGSAEAA
                     ISELPRLASRVGAGARVPSISEAEDEIAALEKLGGRLVASSEPGYPPLLPYISAAPPL
                     LSVIGGDRLELGRAVAIVGARNASAAGQRMTQMLAAEVGAQGYVIVSGLARGIDAAAH
                     SASLSTGTVAVLAGGMDHIYPEENIPLAHAIVEHGGMLVTEMPMGWQPRAQDFPRRNR
                     LVSGLALGVVVIEAAKRSGSLITARLALEQNREVFAVPGSPLDPRAEGANHLIQEGAR
                     LVTSAADIVEGLQGADPSRTILFEPDWEPEGGDVAIEVEPSTGDRAKLIEALSPTPVQ
                     VDALITTTRLPVTAVQTLLLELDLAGRIEWSSGQLVALKP"
     gene            complement(4938..5561)
                     /gene="plsY"
                     /locus_tag="VHZ56_05105"
     CDS             complement(4938..5561)
                     /gene="plsY"
                     /locus_tag="VHZ56_05105"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009756040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEX4297379.1"
                     /translation="MIGYILAAIFGYLLGSIPFGLLITRAAGLGDVRKIGSGNIGATN
                     VLRTGRRELAALTLVLDAAKGAVAVLVARYFWPGDAMYIAAFAVFLGHCFPVWLGFKG
                     GKGVATFIGILLGLAWPVGLVFCLVWLFIAFAQRYSSLAALTAAVTSPIFAYVAWLMG
                     WADDGAKLAATAAVLALLLVYNHRANIGRLINGTEPKIGSEKRAEPG"
BASE COUNT          811 a         1849 c         1935 g          973 t
ORIGIN      
        1 tacgcctcgc ggtcgagcgc cgagcccggc cgcacatagg cggcgacatc ggcgatggcg
       61 acgatgacga tgtggccgcc cgggttgttc ggatcggtgt ccggctcggc gtggaccgcg
      121 tcgtcatggt ccttggcgtc gggcggatcg atggtgatga gcgggatgtg ccgccagtcc
      181 tcgcggccct tgagcgaggc ctctgccgcg gtctccgcct ccttcagcac cgaggccggg
      241 aatcggtagg ggatctcgag gttgtggatc gcgatcatcg agaccgcgcc ctccgattgc
      301 ggattgccga tcaccgcgac gaccgaggcc ttggggatca tcagccgccc gctgaccttg
      361 gtcgcgacct cgacgaggtc gccgtcgcgg gcgtcgccga ggtcggcacc gtcgatccgc
      421 atctccttga gcttgcggtc gaccgggacg aggcgcgcgc cgccgtcgtc gatgcggacg
      481 atgccgatct ggccgcgccg cggcttgtcg aggatcttca tcgcccgcgc ggtgtaggtc
      541 ggcagcgggc cgtcgccggc atcgatgcgg gccaggatgc ggtcgccggg ggcagggacg
      601 acgcgcgctg ctcgcggctg ggtgaccagc acgcgcggct tctcgccttc gtcctcgtcc
      661 cactgcgccg gataggcgtg cagattgtcg ggatcggcgt cgccggggat gtccagcacc
      721 gtcacctgcg gcagggtcgc ggtgcggcgg atcgccttgc gggtccgggc gatgaagccc
      781 gcgccctcga gctccttgag caggaccttg aacggcgttc gcatgtcgcc gtggatgccg
      841 aaatatttgg cgaggtcgcg cttgccgtcg agatcgggcc ggctggccat ggcctcgagc
      901 acggcttcgc gggagggcag ggtgcccacc tggaattgcc gggcgggctt gggggtggtt
      961 ttgggtctat tcttctgagt cattgttcaa cctcggagtc attcccgcga aggcgggagt
     1021 ctccgttgca attgtgaggc cgacaaacag aggttcccgc tttcgcggga aatgacccgg
     1081 tgcaggaaat caggcttcga cgaccttctt ggattttgtg gatgcggcct tcttggccgc
     1141 aggtttcttt ggtgccgcct tcttggccgg cgccttggcg gcggccttgc gggcgggctt
     1201 cctggtgccg ctcttgccgg cccgttcggc gatcagctcg agcgcttgct ccagcgtcac
     1261 gtcttcgggc ttgagcgtct tgggcaatgt cgcattgacc ttgccctggt tgacgtaggg
     1321 gccgtagcgc ccgtcgcgca ccgagatcag gccatcggcg tgctcgaagc tcttgatcgc
     1381 tgcgatcggt gcacggttct tgccgaaccg gccgccaccg gccgccttct gggcgagcag
     1441 gtcgacggcc cggttgaggc cgaccgagaa cacttcctcg acgtcgggca ggttggcgta
     1501 ggtgccctca tgcaggacga aggggccgta gcggccgatg cccgcgctga tcggcttccc
     1561 cgtttccggg tgaaggccga ccgcgcgggg cagcgccagc aactgcagcg ccttctccag
     1621 cgtcagggag tcgggagacc agccttttgg gagagaagat cgcttcggct cgtcgccgtc
     1681 gccgagttgc acatatgggc cgaaccgacc ggacttcaag agcacgttga ggccggtctc
     1741 ctcgtcgacc ccgaggatgc cgtcgccggc cggagccgcg tcggcgccgc cggccgcagc
     1801 gtccgagagc tgcatcgtgt agcggcattc cgggtagttc gagcagccga tgaaggcgcc
     1861 gaacttgccg agcttgagcg acagctggcc ggtgccgcaa ttgggacagc ggcgcggatc
     1921 ggacccgtcg gccttggccg ggaagatgtg gtccgcgagc gtctcgttga gggcatccag
     1981 cacctcggag acgcgcagat ccttgatctc gtcggtctgc cgcgtgaagt cgtcccagaa
     2041 gtcgcgcagc acgaccttcc agccgagttc gccggcggaa atctcgtcga gcttctcctc
     2101 gagcccggcg gtgaagccgt actcgaccag cttcttgaag aaattctcga ggaacgccgt
     2161 gacgatgcga ccccggtcct cggggatcag cgcgcgcttt tcgagccgga cgtagttgcg
     2221 gtcctgcagc accgagatgg tcgcggcata ggtcgagggg cggccgatgc cgagctcttc
     2281 catcttcttg atgaggctgg cttcgctgta gcgcggcggc ggctgcgtga agtgctgctc
     2341 gatcagcgcc tcctcgagcc ggggcgtgtc gcctaccgcc agcggcggca gttcgcggct
     2401 gtcctcgtcg tcctcgtctt cgggccgatc ctccttggca gcaacgccat agaccgcgag
     2461 gaagccgggg aaggtcacca ccgaccccac ggcgcgcagc acgaggtcgc ggcccggggc
     2521 attcacggcg atgtcggcgg tcgtccgctc gatctcggcc ggccgcatct ggcacgccag
     2581 ggtgcgccgc cagatgaggc cgtagagctt tttctggtcg ggatcgccga gcgtctcggg
     2641 atgccggaac atgtcggtgg gccggatcgc ctcgtgtgct tcctgcgcgt tcttggcctt
     2701 gttctggtag atgcgcgggg tcggcggcaa ataggccgag ccgaactcct tctcgatggc
     2761 gctgcgggcg gcggcgatgg cttccggcgc catgtcgatg ccgtcggttc gcatgtaggt
     2821 gatgacgccg tcctcgtaga gccgctgcgc gatctgcatc gtgcggctcg gcgacaagcc
     2881 cagccgcgac gacgcgtcct gctgcaggct cgaggtggtg aacggcgcgt aagggttgcg
     2941 ccgcgtcggc ttcttgtcca ccgacctgac ctcgaagcgc ccggactcga tggcgctctt
     3001 gagccggccg gcgtcctcgc ccgacttgac ctcgagcttg tcggcaacct tgccatcgac
     3061 ggaatagagc cgggcctcga agcccttgcc cttctcgacg agcttggcgt cgaccgacca
     3121 gtattcgacc ggcctgaact tctcgatctc ggtttcgcgg tcgcagacga tgcgcagtgc
     3181 caccgactgc acccggccgg ccgatcgcga gccgggcagc ttgcgccaga ggatcggcga
     3241 cagcgtgaag ccgacgaggt agtcgagtgc ccggcgcgcc aggtaggcat cgaccagcgg
     3301 ctcatcgatc tgccggggat gcttcatcgc ctcggtgatg gcgttcttgg tgatggcgtt
     3361 gaacaccacc cggctcaccg gcttgtcctt caccagcttc ttctgcttga gcacgtcgag
     3421 cacgtgccag ctgatcgcct cgccctcacg atcggggtcg gtcgcgagga tcagctcatc
     3481 ggcatccttg agcgcattgc cgatgtcgct gagccgtttc ttcgaggccg tgtcgacctc
     3541 ccagatcatc gcgaaatcgt cgtcgggaag caccgagccg tctttggccg gaaggtcgcg
     3601 cacatggccg tagctggcga ggacctcgta gtccttgccc aggtatttgt tgatggtctt
     3661 tgccttggcc gggctttcga cgacgaccag tttcatgccg cgatgctttc agaggggtgt
     3721 tcgacgcggc ggaaaatggt ggagccgtcc cacgctgtca accttgccgg cggcgccgtt
     3781 ttcgcttccc ctttagggga aataaatttg cggctacggc ttcagcgcca ccagctgccc
     3841 gctggaccac tcgatccgcc ccgccaggtc gagctcgagc agcagcgtct gcaccgccgt
     3901 caccggcagc cgcgtcgtgg tgatcagcgc atccacctgc accggcgtcg ggctcagcgc
     3961 ctcgatcagt ttcgcgcgat ccccggtcga tggttcgact tcgatggcga cgtcgccgcc
     4021 ctcgggttcc cagtcgggtt cgaacaggat cgtgcgcgac ggatcggcgc cctgcaggcc
     4081 ctcgacgata tcggcggcgg aggtgacgag ccgcgcgcct tcctggatca ggtggttggc
     4141 gccctcggcg cgcgggtcga ggggggatcc gggcaccgcg aacacctcgc ggttctgctc
     4201 gagcgccagc cgggcggtga tcagcgatcc cgagcgcttg gcggcctcga tcacgaccac
     4261 ccccagcgcc agtcccgaca ccaggcggtt gcggcgcggg aaatcctgcg cccgcggctg
     4321 ccaccccatc ggcatctcgg tgaccagcat gccgccatgc tcgacgatgg cgtgcgccag
     4381 ggggatgttc tcctccggat agatgtggtc catgccgccg gcgaggaccg cgaccgtacc
     4441 ggtgctgagc gacgccgagt gcgctgccgc gtcgatgccg cgggcgaggc cggagacgat
     4501 cacatagccc tgcgcgccga cctcggcggc cagcatctgg gtcatccgct gtcccgccgc
     4561 cgaggcgttg cgggcgccga cgatcgccac cgcccggccg agctcgagcc ggtcgccgcc
     4621 gataaccgac agcagcggcg gcgcagccga gatgtagggc agcagcggcg ggtaccccgg
     4681 ctcgctcgag gcaaccagcc ggccgccgag tttttcgagc gccgcgatct catcctccgc
     4741 ctcgctgatg ctcggaacgc gcgcccccgc cccaacgcgc gaggcgagac gcggcagctc
     4801 ggagatcgcg gcttcggcgg acccggtgcg gttgatcagc tgccggaacg tcaccggccc
     4861 gacattgtcg gtacggatca gccgcagcca ggcgatcttc tgcgacggcg tgagactggt
     4921 ccccgtcgcc cgtgccatca gcctggctcg gcccgctttt ccgagccgat cttcggctcg
     4981 gtgccgttga tcagccggcc gatattggcg cggtgattgt agacgaggag gagagccagt
     5041 accgccgccg tcgccgcgag tttggcgccg tcatcggccc agcccatgag ccacgcgaca
     5101 taggcgaaga tcggcgaggt cacggcagcg gtgagtgccg ccagcgacga gtagcgctgc
     5161 gcgaaagcga tgaacagcca gacgaggcag aacaccagcc cgaccggcca ggcgaggccc
     5221 agcaggatgc cgatgaatgt cgcgacgccc ttgccgccct tgaagccgag ccagaccggg
     5281 aagcagtggc cgagaaagac ggcgaaggcg gcgatgtaca tcgcatcgcc cggccagaaa
     5341 tagcgggcga ccaggaccgc gaccgcaccc ttggcggcgt cgagcacgag ggtcagcgcg
     5401 gccagctccc gccggccggt gcgcagcaca ttggtcgcgc cgatgttgcc cgagccgatc
     5461 ttgcggacgt cgccgaggcc ggccgcccgg gtgatcagca gcccgaacgg gatcgacccc
     5521 agcaggtagc cgaagatcgc cgcgagaatg taaccgatca tgcctccc
//
LOCUS       DATAZA010000199         4228 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1414572, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000199 DATAZA010000000
VERSION     DATAZA010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4228
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1414572"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..522)
                     /locus_tag="VHZ56_05110"
     CDS             complement(<1..522)
                     /locus_tag="VHZ56_05110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008874573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HEX4297380.1"
                     /translation="MPDATLSEETFKQRFRSQFIDPAFASLDGELEAIAAAAWDGYTN
                     SRKSPRTRKAGPGYADPDYDLAEDWIAAKAAVEAAQTQYEAAAGPRRVLLVNGSPRSE
                     HTCPGESSKSWRLVELARVDLEKAGLVTEVLDLSRLTSEYGRNIHPCKACFSTAAPLC
                     HWPCSCYPNYSLGQ"
     gene            1052..4207
                     /locus_tag="VHZ56_05115"
     CDS             1052..4207
                     /locus_tag="VHZ56_05115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HEX4297381.1"
                     /translation="MTAFSSSLKAILGPTNTGKTFFAIERMLAHRSGMIGLPLRLLAR
                     EVYQRVAARIGADAVALVTGEERIVPPKPRYWVATVEAMPLDMPVECVAVDEIQVATD
                     FDRGHVFTDRLLHARGLSETLLLGAATMAPIIRTLLPDAEIIHRPRFSTLLYAGSRKI
                     SRQPARSAIVAFSAREVYAIAELIRRERGGAAVVMGALSPRTRNAQVDMYQNGDVDFL
                     VATDAIGMGLNLDVHHVAFADDHKFDGHQNRPLTPAEFGQIAGRAGRHMHNGTFGVTG
                     NADPFETELVVALESHDFEPVRQIQWRNPDLDFASIETLRASLDVTPAHKALTRVPTA
                     TDQQALEFLARNEAGDLAIGRPAVELLWQCCALPDYRDISPAQHGEIITRIYTDLRRH
                     GAIATDWIAEQVRFCDNAVGDIDTLSNRIRQIRTWTYVANRKNWLEDPAHWREKTRDI
                     EDRLSDALHERLTQRFVDRRTSVLMRHLRDRSMATPEINDHGEISLEGHLIGSIQGFR
                     FTLARSDGEVDAKALAGAAAQVVAPEIAHRADRLAGAPNEEFVLSTDGQLRWRGEVVA
                     SLAEGDSLFAPRLIVLADESLTGPDLERVQDRLSLWLRHQVNTVLEPVLALEAPADLE
                     GAAKGVAYRLYENLGLMPRALVSEEVKGLDQDVRAKLRKLGVKFGAYHIYVPLALKPA
                     PRELAIILYALKHGGVRQPGVSELPHTVLSGRTSFQIDPEISTKLYEVAGFKVAGRRA
                     VRVDILERLADIIRPLIALDARTHQGEPPAGAAEGNGFRITVEMTSLLGTAGEDFASI
                     LTSLGYRVRRTPKIAAVTAPVETEAQIDAAVAGAADPVAPSEVASDAADAATNVAAAE
                     AVEGSTAAPATPVAEAAAVETATSDLGAPPPESAAAAEPSATEPVTPAEPEFDEVWFP
                     GGRRPDNPRPHSSRAPRAEASGEAPATDARPPRRFHRNAAARPEPGSDARPAGDPPPR
                     DPAAPPRSDGDRPPRLRFDNKRGKPGPREDGGKPRFEGKRPDRPRDDWKEHRPREKRD
                     LPLDPDSPWAALAALRTPKPE"
BASE COUNT          687 a         1569 c         1353 g          619 t
ORIGIN      
        1 ctggccgagc gaataattcg ggtagcacga gcacggccag tggcagagcg gtgcggccgt
       61 cgaaaagcat gccttgcatg gatggatgtt gcgcccgtac tccgaggtga gccggctgag
      121 gtcgagcact tcggtgacca gtccggcttt ctcgaggtca acgcgcgcca gctccaccag
      181 gcgccacgac ttcgagcttt cgcccggaca cgtatgctcg ctgcgtggcg agccgttgac
      241 gaggaggacc cgccgcggcc ccgccgcagc ctcgtattgt gtttgcgccg cctcgacggc
      301 ggccttggcc gcgatccagt cctcggcgag atcgtagtcc ggatcggcat agcccggccc
      361 ggccttgcgg gtgcgcggcg acttgcgcga attggtgtag ccgtcccatg ccgccgcggc
      421 gatcgcctcc agctccccat ccagcgacgc gaaggccggg tcgatgaact gcgatcgaaa
      481 gcgttgcttg aacgtctctt cgctcaatgt tgcatcgggc atcaccttgc gaacggacgg
      541 ctgggtcggc ggcatcacgg gctccatggt cgaactggga cagaagcttc cgcaacgggc
      601 cgaagttccg gccgccgcca caattgtggt taaccagcaa tgaagatttg ccgcgtgtcg
      661 ttctggtacg gtcaacgggt ttattgccaa cgccgcggcg aaaaaccccg gcggcgcggc
      721 gcccgctttg tgagcgcgcg aagtattttt ggcggcccgg gattcaggat cgattcacga
      781 ttcgccgagt cgccgccgaa gccgttgaaa atcaaccgga tcgcaataaa tatgaacggc
      841 ttggacctga aaacctcgtc ccccggacga agattttcct tgctagccgg aatcaccgcc
      901 gccgacccac aaccagcagt agggaacaaa ccggcattgc cgagtcgccg ccgattcgac
      961 ccgcttatgt tccccttccg taccactcgt taatggcagg ccggagcacg gccctaggct
     1021 cgccaccgtt cctcgcctaa ataacctgca gatgaccgcc ttctcttcct cgctcaaggc
     1081 catcctcggc cccaccaaca ccggcaagac cttcttcgcc atcgagcgga tgctggcgca
     1141 tcgctcgggg atgatcggcc tgccgctgcg cctgctggcc cgcgaggtgt accagcgcgt
     1201 cgccgcgcgc atcggcgccg acgccgtggc gctggtgacc ggcgaggagc gcatcgtgcc
     1261 gccgaagccc cgctactggg tggcgacggt cgaggcgatg ccgctcgaca tgccggtcga
     1321 gtgcgtcgcg gtcgacgaaa tccaggtggc gaccgatttc gaccgcggcc acgtcttcac
     1381 cgaccgcctg ctgcatgccc gcggcctcag cgagacgctg ctgctgggcg ccgcgaccat
     1441 ggcgccgatc atccgcaccc tgctgcccga cgccgagatc atccatcggc cgcggttttc
     1501 gaccctgctc tatgccggca gccgcaaaat ctcgcgccag ccggcgcgct cggccatcgt
     1561 cgcgttctcg gcccgcgagg tttacgccat cgccgaactg atccgccgcg agcgcggcgg
     1621 cgccgcggtg gtgatggggg cgctcagccc ccgcacccgc aacgcccagg tcgacatgta
     1681 ccagaacggc gacgtcgact tcctcgtcgc caccgacgcc atcggcatgg ggctcaacct
     1741 cgacgtgcac cacgtcgcct tcgccgatga ccataagttc gacggccacc agaaccggcc
     1801 gctgaccccc gctgaattcg gccagatcgc cggccgcgcc gggcggcaca tgcacaacgg
     1861 cactttcggg gtcaccggca acgccgatcc gttcgagacc gagctggtgg tggcgctcga
     1921 atcccacgat ttcgagccgg tgcggcaaat ccagtggcgc aacccggatc tcgatttcgc
     1981 ctccatcgag acgctgcggg ccagcctcga cgtcacgccc gcccacaagg cactgacccg
     2041 cgtcccgacc gccaccgacc agcaggcgct ggagttcctg gcgcgcaacg aggccggcga
     2101 cctcgcgatc ggtcgccccg ccgtggaact gctgtggcag tgctgcgccc tgcccgacta
     2161 ccgcgacatc tcgccggccc agcacggcga gatcatcacc cgcatctata ccgatttgcg
     2221 ccgccacggc gccatcgcca ccgactggat tgccgagcag gtgcggtttt gcgacaatgc
     2281 ggtcggcgat atcgacacgc tcagcaaccg gattcgccag atccgcacct ggacctacgt
     2341 cgccaatcgg aaaaactggc ttgaagaccc ggcgcattgg cgcgaaaaga cccgtgacat
     2401 cgaggaccgg ctgagcgacg cgctgcacga gcggctcact cagcgctttg tggaccggcg
     2461 caccagcgtt ctgatgcgcc acttgcgaga cagatccatg gctacccccg aaatcaacga
     2521 ccatggcgag atcagtctcg aaggtcacct gattggctcg atccagggct tccgcttcac
     2581 cctcgcccgt tccgacggcg aggtcgacgc caaggcattg gctggcgccg ccgcgcaggt
     2641 ggtcgccccc gagatcgccc accgcgccga ccggctggcc ggggcgccca acgaggagtt
     2701 cgtgctgtcg accgacggcc agctgcgctg gcgcggcgag gtcgtggcga gcctcgccga
     2761 aggcgacagc ctgttcgcgc cgcgcctgat cgtgctcgcc gacgagagcc tcaccggccc
     2821 cgacctcgag cgcgtgcagg atcgcctcag cctctggctg cgccatcagg tcaacaccgt
     2881 gctcgagccg gtgctggcgc tcgaggcgcc cgccgatctc gagggcgccg ccaagggtgt
     2941 cgcctaccgg ctctacgaga acctcgggct gatgccgcgg gcgctggtga gcgaggaggt
     3001 caagggcctc gaccaggacg tccgcgccaa gctgaggaag ctcggcgtca agttcggcgc
     3061 ctaccacatc tacgtgccgc tggcgctgaa gccggcgccg cgcgagctcg ccatcatcct
     3121 ctacgcgctc aagcatggcg gcgtgcgcca gcccggcgtc agcgaattgc cgcacaccgt
     3181 gctcagcggc agaacgtcgt tccagatcga tcccgagatc tcgaccaagc tctatgaggt
     3241 cgccggcttc aaggtcgccg gccggcgcgc cgtgcgcgtc gacatcctcg agcgcctggc
     3301 cgacatcatc cggccgctga tcgcgctcga tgccaggacc caccagggcg agccgcccgc
     3361 cggtgccgcg gagggcaatg gtttccgcat caccgtcgag atgacgtcgc tgctcggcac
     3421 cgccggcgaa gacttcgcct cgatcctgac ctcgctcggc tatcgcgtcc gccgcacgcc
     3481 caagatcgcg gccgtgacgg cgccggtcga aaccgaggcg cagatcgacg cggcggttgc
     3541 cggcgccgcc gatcccgtcg cgccgtccga ggtcgcctcc gacgccgccg atgccgcgac
     3601 caatgtcgcc gccgccgagg cggtcgaggg cagcaccgcg gcgcccgcca ccccggtcgc
     3661 cgaagccgcg gcggtcgaga cggccacgtc cgacctcggc gcgccaccac cagaatccgc
     3721 tgccgctgcg gagccttccg cgaccgaacc agtcacgccc gccgaacccg agttcgacga
     3781 ggtgtggttt cccggcggcc gccggcccga caatccgcgc ccgcactcca gccgcgcgcc
     3841 gcgcgccgag gccagtggcg aggctccggc caccgatgcc cgtccgcccc gccgcttcca
     3901 ccgcaacgcc gccgcgaggc ccgagccggg atccgacgcc cggcccgcgg gcgatccgcc
     3961 gccgcgcgat ccggccgcgc cgccccgcag cgacggcgac cggccgcccc gcctgcgctt
     4021 cgacaacaag cgcggcaagc cgggcccgcg cgaggacggc ggcaagccgc gcttcgaagg
     4081 caagcgtccc gatcggccgc gcgacgactg gaaggaacac cggccacgcg aaaagcgcga
     4141 cctgccgctc gatccggatt cgccgtgggc ggcgctcgcc gcgctgcgga cgcccaagcc
     4201 cgagtagcgg ttgacgaagc agcggctc
//
LOCUS       DATAZA010000200         1987 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1298892, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000200 DATAZA010000000
VERSION     DATAZA010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1987
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1298892"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..229)
                     /locus_tag="VHZ56_05120"
     CDS             complement(<1..229)
                     /locus_tag="VHZ56_05120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009211107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX4297382.1"
                     /translation="MDADIVIVGAGIVGLATAHALVEAGRSVTLIDRRGMAEEASRGN
                     AGAFAFSDIMPLATKDVLKKLPRWLADPLGPL"
     gene            complement(237..1145)
                     /locus_tag="VHZ56_05125"
     CDS             complement(237..1145)
                     /locus_tag="VHZ56_05125"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016736904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEX4297383.1"
                     /translation="MTLTWRGVIPALMTEMKQNGDLDLEATARHIDSCLSAGCEGFVM
                     LGTLGENSSLALDEKADVVATAVKAVKGRVPVVAGVAEYTTNLAIASANRMKQAGAAG
                     IMALPTMVYMTDSRESVVHFRTLARAVDLPIMIYNNHVAYKVDLKPADFALLKDEKNI
                     EAVKESSHDSRRITDMINVLGDRYAVVCGVDDLVLENLLFGAVGWVSGLANSFPREAV
                     QLFKLAKSGRTAEALELYRWFMPLLHLDVATKLVQYIKLVNQMTGEGSEWVRAPRLTL
                     EGDERQRITAIVQQAIDSRPQLKKVA"
     gene            1238..>1987
                     /locus_tag="VHZ56_05130"
     CDS             1238..>1987
                     /locus_tag="VHZ56_05130"
                     /inference="COORDINATES: protein motif:HMM:NF015747.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX4297384.1"
                     /translation="MRIGFIGTGTISAAVVEGLQSLPEPPAIVVSPRSEAVSTGLAAR
                     FAKVTRAATNAEVAKADIVFLGMRPMHLEEALAGIEIGAGQIVASMVAGFAIEDIRRR
                     WPKATVCRFIPLPGIARRAGPMAMYPAVPDVVALVAPLGDLFVVGDESRLHFGGLNSF
                     MSSYFELQRALIDAGIAAGLTADEARGYVVSLLGMLAGTAQRTEAADFDRLAEEHQTK
                     GGLNERVRAALLAKGWFDVPAAVLRETTTIGY"
BASE COUNT          302 a          632 c          710 g          343 t
ORIGIN      
        1 caagcgggcc gagcggatcg gccagccagc gcggcagctt cttcagcacg tccttggtgg
       61 cgagcggcat gatatcggag aaggcgaagg cgccggcgtt gccgcggctc gcctcctcgg
      121 ccatgccgcg ccggtcgatc agcgtcaccg agcggccggc ctcgacgagc gcgtgggcgg
      181 tcgcgaggcc gacgatgccg gcgccgacga tgacgatgtc tgcgtccaac gcggcctcag
      241 gcgaccttct tgagctgcgg gcgggagtcg atcgcctgct ggacgatggc agtgatgcgc
      301 tggcgctcgt cgccctcgag ggtcaggcgc ggcgcgcgaa cccactcgct gccctcgccg
      361 gtcatctggt tgacgagctt gatgtactgc acgagcttgg tcgcgacatc gaggtgcagc
      421 agcggcatga accagcggta gagctcgagc gcctccgccg tgcggccgga cttggcgagc
      481 ttgaacagct gcaccgcttc gcgcggaaag gaattggcga ggcccgacac ccagccgacg
      541 gcgccgaaca gcaggttctc gagcaccaga tcgtcgacgc cgcagacgac ggcgtagcga
      601 tcgccgagga cattgatcat atcggtgatg cggcggctgt cgtggctcga ctccttgacg
      661 gcctcgatgt tcttttcatc cttcagcagc gcgaagtcgg caggcttcag gtcgaccttg
      721 taggccacgt ggttgttgta gatcatgatc ggcaggtcga cggcgcgggc cagtgtccgg
      781 aagtgcacga cgctctcgcg gctgtcggtc atgtagacca tcgtcggcag cgccatgatg
      841 ccggcggcgc ccgcctgctt catgcggttg gccgaggcga tcgcgagatt ggtagtgtat
      901 tcggcaacgc cggcgaccac cggaacccga cccttcaccg ccttcaccgc ggtggcgacg
      961 acgtcggctt tctcgtccag cgccagcgag ctgttttcgc cgagggtgcc gagcatgacg
     1021 aagccttcgc agccggcgct caggcaggag tcgatatgcc gcgcggtggc ctcgaggtcg
     1081 agatcaccgt tctgcttcat ctcggtcatc aatgcgggaa tgacgccgcg ccaggtgagg
     1141 gtcatgggtt ggtccttgtg tttggcctgg gatatggttt gaaggcagcc gcgagcggcc
     1201 gggccgggtc gcgctgtgct agcatggaga gcggtcgatg cgcatcgggt tcattggcac
     1261 gggaacgatc tcggcagcgg tcgtcgaagg cctgcaatcc ctgccggagc caccggcgat
     1321 cgtggtttcg ccgcgctcgg aagcggtctc cacggggctc gccgcgcgct tcgcgaaggt
     1381 cacgcgcgcc gcgaccaatg ctgaagttgc caaggccgat atcgtgttcc tcggcatgcg
     1441 gccgatgcac ctcgaggagg cgctggccgg catcgagatc ggcgccgggc agatcgtcgc
     1501 cagcatggtc gccggatttg caatcgagga catccgccgg cgctggccaa aggccaccgt
     1561 gtgccggttc attccgctgc cgggcatcgc gcgccgggcc ggaccgatgg cgatgtatcc
     1621 cgcggtgccg gacgtcgtgg cattggtggc gccgctcggc gacctgttcg tcgtcggcga
     1681 cgagagccgg ctgcatttcg gcggcctcaa ctcgttcatg tcgagctatt tcgagttgca
     1741 gcgggcgctg atcgacgccg gtatcgccgc cggcctcacc gccgatgaag cgcgcggcta
     1801 tgtcgtgtcg ctgctgggga tgctggccgg tacggcacaa cggaccgagg cggcggattt
     1861 cgaccggctg gccgaagagc accagaccaa gggcggcctc aacgagcgcg tccgcgccgc
     1921 gctgctcgcc aagggctggt tcgacgtgcc ggcggcagtg ctgcgggaga ccacgacgat
     1981 cggctac
//
LOCUS       DATAZA010000201         2597 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2574816, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000201 DATAZA010000000
VERSION     DATAZA010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2597
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2574816"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1406
                     /locus_tag="VHZ56_05135"
     CDS             <1..1406
                     /locus_tag="VHZ56_05135"
                     /inference="COORDINATES: protein motif:HMM:NF015763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nickel/cobalt transporter"
                     /protein_id="HEX4297385.1"
                     /translation="PDALADALYALPPDVTKLPPELEQAMRGMQGAIVVNCPGGSLTG
                     KPGAAQPATSVAAAASPAPATALDAADALAAATPDQETDTTGADAGASQDRGATASMP
                     QPPTPLFVGNMPFGAAPNEPGLVLPRTGFLGWVQQEQQDFYLALEKSLASMKTSWTGF
                     WVLGLLSFLYGIFHAAGPGHGKVVISSYVLANEAQVKRGILLSFISAMMQSAVAIAFV
                     LIAATVLGMTAMAMSDAANWIGIISYAMVAVLGLWLIFRKIFGWGHKHSHDDAHHDLA
                     GDDDDAGYAPAASAMQSLARRHMGVPAHALATGGPQLTSFRVANAGPDGYGRMPGDQH
                     YGHDHADEDEHGHQHGHGHAHVVTPDQIRGGWREQVGVVFAVGLRPCSGALIVLAFAL
                     SQGLLIAGIVAVLLMGLGTAITTGTLATIAVGFKGVARRLAGADNKFTGALVWWAELF
                     AAVAVFGFGIILILASI"
     gene            complement(1430..1720)
                     /locus_tag="VHZ56_05140"
     CDS             complement(1430..1720)
                     /locus_tag="VHZ56_05140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297386.1"
                     /translation="MSYTTIARQFTKQEAEAEAIRRWYLLPPHQRQTCEDAEAYGQRI
                     EADFDFYCVTSRARLIGAWLIRELFRARAAEANDELIAFTDAVADDRADRAA"
     gene            complement(1756..2055)
                     /locus_tag="VHZ56_05145"
     CDS             complement(1756..2055)
                     /locus_tag="VHZ56_05145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297387.1"
                     /translation="MICKTAMAPNSPQTGHAKQSGLGFEATEQDAELPELTQDEAQRE
                     AIRRWHALPAEERHTHMHARVFAAGLAEELPFRTMGNRRRVIEAWLIRDIALGGN"
     gene            2141..>2597
                     /locus_tag="VHZ56_05150"
     CDS             2141..>2597
                     /locus_tag="VHZ56_05150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007772441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HEX4297388.1"
                     /translation="MDTTTASPRRAGWLRGSTTPPLVEVFRSIPLPKGAPAWRRFLTF
                     VGPGYLVAVGYMDPGNWATSLAGGSQFGYALLSVALLSNLMAILLQALCARLAIATGK
                     DLAQACRDAFPHWVAWPLWMLAELAIVATDLAEVVGTAIGLNLIFHIPLE"
BASE COUNT          374 a          858 c          914 g          451 t
ORIGIN      
        1 tgcccgacgc gctggccgat gcgctgtatg cgctgccgcc ggacgtgacc aagctgccgc
       61 ccgagctcga gcaggcgatg cgcggcatgc agggcgccat cgtggtcaat tgcccgggcg
      121 gcagcctgac gggcaagccc ggtgccgcac agccggcaac cagtgtcgcg gccgccgcca
      181 gtcctgctcc ggcgacggcg ctggatgcgg ccgacgcgct cgccgcggcc acgcccgacc
      241 aggagacgga cacgacgggc gccgatgccg gagcgtcgca ggaccgcggc gccaccgcgt
      301 cgatgccgca gccgccgacg ccgctattcg tcggcaacat gccgttcggc gccgcgccga
      361 acgagccggg gctggtgctg ccgcgcaccg gctttctcgg ctgggtgcag caggagcagc
      421 aggacttcta cctcgcgctt gaaaaatcgt tggcctcgat gaagaccagc tggaccggtt
      481 tctgggtgct cgggctgctc agcttcctct acggcatctt ccacgccgcc gggcctggcc
      541 atggcaaggt ggtgatctcg tcctacgtgc tggccaacga ggcgcaggtg aagcgcggca
      601 ttctgctcag cttcatttcg gcgatgatgc agtcggcggt ggcgatcgcc ttcgtgctga
      661 tcgcggcgac ggtactcggc atgacggcga tggcgatgag cgacgccgcc aactggatcg
      721 gcatcatctc ctacgcgatg gtggcggtcc tcgggctgtg gctgattttt cgcaagatct
      781 tcggctgggg ccacaagcac agccacgacg acgcccacca tgaccttgcc ggggacgatg
      841 acgatgcggg ctacgccccg gcggcaagcg caatgcagtc gctggcgcga cggcacatgg
      901 gggttccggc gcatgcgctg gcgaccggcg ggccgcaatt gaccagtttt cgggtggcca
      961 atgccggacc ggatggctat gggcggatgc ccggagacca gcactacggt catgatcacg
     1021 cggacgaaga cgagcacggc catcagcatg ggcacgggca cgcgcatgtg gtgacgccgg
     1081 accagatccg cggcggctgg cgcgagcagg tgggcgtggt gttcgcggtc ggcctcaggc
     1141 cctgttccgg ggcactgatc gtgctcgcct tcgcgctcag tcagggcctc ttgatcgcgg
     1201 ggatcgtcgc cgtgctgctg atggggctgg ggacggcgat caccaccggc acgctcgcca
     1261 ccatcgcggt cggcttcaag ggcgtggcgc ggcggctcgc cggtgccgac aacaagttca
     1321 ccggggccct ggtgtggtgg gccgagctgt tcgccgccgt ggcggtgttc ggcttcggca
     1381 tcatcctcat tctcgccagc atctagccgg cgggagttgc cggctcgggc taggcggcgc
     1441 ggtcggcccg gtcgtcggcg acagcgtcgg tgaaggcgat gagctcgtca ttggcctcgg
     1501 cggcgcgggc gcggaacagc tcgcggatca gccaggcacc gatcagccgg gcgcggctgg
     1561 tgacgcaata gaaatcgaaa tcggcctcga tgcgctggcc ataggcctcg gcgtcctcgc
     1621 aggtctggcg ttgatgcggt ggcagcaggt accagcggcg gatggcttcc gcctccgctt
     1681 cctgcttggt gaactgccgg gcgatcgtgg tgtaggacat ggtgtgaaaa tcgccgcgca
     1741 atggttaccg ttcggttaat ttccgcccag cgcgatgtcg cggatgagcc aggcctcgat
     1801 cacccgccgc cgattgccca tggtgcggaa cggcagctct tcggcgaggc cggctgcaaa
     1861 aaccctggcg tgcatatggg tgtggcgttc ttcggcgggc agcgcgtgcc agcggcgaat
     1921 ggcttcgcgc tgggcttcgt cctgggtcaa ttccggcaat tccgcgtcct gctccgtagc
     1981 ctcgaatccg agccctgact gcttcgcgtg accagtttgt ggcgagttcg gcgccattgc
     2041 cgtcttgcaa atcatttgca tctagactag ttcttgcgaa tgatttgcaa tcgcagctca
     2101 ctccagatat gaaccgggct cccggatgac gacggacacg atggacacca ccaccgcctc
     2161 tccccgccgc gccggctggc tgcgcggcag cacgacgccg ccgctggtgg aagtgttccg
     2221 cagcatcccg ctgcctaagg gggcgccggc gtggcgccgg ttcctcacgt tcgtcgggcc
     2281 gggttacctc gtcgccgtcg gctacatgga cccgggcaac tgggccacct cgctcgccgg
     2341 cggcagccag ttcggctacg cgctgctgtc ggtcgcgctg ctctcgaacc tgatggcaat
     2401 cctgctgcag gcgctgtgcg cgcggctggc gatcgcgacc ggcaaggatc tggcgcaggc
     2461 ctgccgcgac gccttcccgc actgggtggc gtggccgctg tggatgctcg cggaactggc
     2521 gatcgtcgcc accgacctcg ccgaggtggt gggcacggcg atcggcctca acctgatctt
     2581 ccacatcccg ctcgagc
//
LOCUS       DATAZA010000202         2150 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3271429, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000202 DATAZA010000000
VERSION     DATAZA010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2150
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3271429"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..183
                     /locus_tag="VHZ56_05155"
     CDS             <1..183
                     /locus_tag="VHZ56_05155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297389.1"
                     /translation="AVMLCEQQALAAATAQKQQSLDIQSDLQQQQLDFDEQLKLQQTF
                     SAAQSAAIPSSSLPPY"
     gene            248..1231
                     /locus_tag="VHZ56_05160"
     CDS             248..1231
                     /locus_tag="VHZ56_05160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018860050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4297390.1"
                     /translation="MALKVLFVGGTGQISLPCVELALAAGHKVSVFNRGQRHEALPKG
                     VTSIVGDMKDPASYARLGEETWDVVAQFMVFTPAQMQQDIATFTGKTGQYIFISSASV
                     YQKSIDTYVITEKTPAVNPYWDYSQAKIACENLMKASGLKWTNVRPSHTVRSGLPTLL
                     NDGDAVAHRMLAKKPVILAGDGNAPWTLTRSEDLAKPFVKLFGNAAALGEDFHITGDK
                     GFTWDDIYTAIGRGLGVEVDIAHVPTDTLIRYKPDWAGPLLGDKSWTALFDNSKIKRV
                     AGDFSCETDLDKILVNSLRFLKQRIADKTPYSTETEPLVERIIAAQRALGA"
     gene            complement(1233..>2150)
                     /locus_tag="VHZ56_05165"
     CDS             complement(1233..>2150)
                     /locus_tag="VHZ56_05165"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEX4297391.1"
                     /translation="ALYVFNNSRDRLVLSTSWGRPDEAQPPETIPPDQCWALKRGKPH
                     LNRHDGSKLCCEHHHGSDTVIEIPMIARGEIMGLFQLFAMGDNAEAKLAGVTGLGSAL
                     ADGMSLALANMGLREKLRNQALRDPLTGLYNRRYMEDCLQRFVRLADREHREVSVVMV
                     DLDHFKKLNDQHGHAFGDAVLRDTAMTIVGALRETDIVCRYGGEELVVILPDCSLERA
                     ADKAEVLRNRIAALSESHSADIAASFGVASMPYTSAGVSDLLAAADGALYKAKQNGRN
                     QVVTAPTRSFQIDRLEDQLDHVTPMQAVA"
BASE COUNT          369 a          752 c          687 g          342 t
ORIGIN      
        1 gcggtgatgc tctgcgagca gcaggccctc gcggcggcca cggcgcagaa gcagcagagc
       61 ctcgatatcc agtccgacct gcagcagcag caattggatt tcgacgagca gctgaagctg
      121 cagcagacct tttcggcggc ccagtcagcc gccatcccgt cgagttcgct gccgccctac
      181 tgatcgggcg ctcccgcttg ccagttcaac tcccaggggc cagtctccgt caaaacggag
      241 aaatgtcatg gcgctcaagg ttctgttcgt cggcggcacc gggcagattt cactgccctg
      301 cgtcgagctc gcgctggcgg ccggccacaa ggtctcggtg ttcaaccgcg gccagcggca
      361 cgaggcgctg cccaaggggg tgacctcgat cgtcggcgac atgaaggacc ccgcaagcta
      421 cgccaggctc ggggaagaga cctgggacgt cgtcgcccag ttcatggtct tcacccccgc
      481 gcagatgcag caggacatcg ccaccttcac cggcaagacc ggccagtaca tcttcatctc
      541 ctcggcctcg gtctaccaga agagcatcga cacctacgtc atcaccgaga agaccccggc
      601 ggtgaacccg tactgggatt acagccaggc caagatcgcc tgcgagaacc tgatgaaggc
      661 gagcggcctc aaatggacca acgtccggcc gagccacacc gtgcgctccg gcctgccgac
      721 gctgctcaac gacggcgacg cggtcgccca ccgcatgctc gccaaaaagc cggtgatcct
      781 cgccggcgac ggcaacgcgc cgtggacgct cacccgctcg gaagatctgg ccaagccgtt
      841 cgtcaagctg ttcggcaatg ccgcggcgct cggcgaggat ttccacatca ccggcgacaa
      901 gggcttcacc tgggacgaca tctacacggc catcggccgc gggctgggcg tcgaggtcga
      961 catcgcccac gtccccaccg acacgctgat ccgctacaag cccgactggg ccggaccgct
     1021 gctcggcgac aagagctgga cggcgctgtt cgacaattcc aagatcaagc gcgtcgccgg
     1081 cgacttcagc tgcgagaccg acctcgacaa gatactggtc aactcgctcc gcttcctcaa
     1141 gcagcggatc gccgacaaga ccccctacag caccgagacc gaaccgctgg tcgagcggat
     1201 cattgcagcg cagcgcgccc tcggcgcctg agctacgcca ccgcctgcat cggcgtcacg
     1261 tggtcaagct ggtcctccag ccggtcgatc tggaacgacc gggtgggggc cgtcaccacc
     1321 tggttgcggc cgttctgctt ggccttgtag agggctccgt cggccgcggc gagcaggtcg
     1381 ctgacgccgg ccgaggtgta gggcatcgag gccacgccga acgaagcggc gatgtcggcg
     1441 ctgtggctct cgctcagcgc ggcgatccgg ttgcgcagca cctcggcctt gtcggccgcc
     1501 cgctcgaggc tgcaatcggg caggatcacc accagttcct ccccgccata gcggcagacg
     1561 atatcggtct cgcgcagcgc cccgacgatg gtcatcgccg tgtcgcgcag caccgcgtcg
     1621 ccgaaggcgt ggccgtgctg gtcgttgagc ttcttgaaat gatcgaggtc gaccatcacc
     1681 acgctcacct cgcggtgctc gcggtcggcc agccgcacga agcgctgcag gcagtcttcc
     1741 atgtagcgcc ggttgtagag cccggtcagc gggtcgcgca gggcctggtt gcgcagtttt
     1801 tcgcgcagcc ccatgttggc cagcgcgagg ctcatgccgt cggccagcgc cgagccgagg
     1861 ccggtgacgc cggcgagctt cgcctcggcg ttgtcgccca tcgcgaacag ctggaacagc
     1921 cccatgatct cgccgcgcgc gatcatcggg atctcgatca ccgtgtcgct gccatggtgg
     1981 tgctcgcagc agagcttgct gccgtcgtgc cggttgagat gcggcttgcc gcgcttcagc
     2041 gcccagcact ggtccggcgg aatggtctcg ggcggctgcg cctcgtcggg acgcccccag
     2101 gaggtcgaca gcaccagccg gtcgcgcgaa ttgttgaaca cgtagagggc
//
LOCUS       DATAZA010000203         2955 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_950046, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000203 DATAZA010000000
VERSION     DATAZA010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2955
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_950046"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1047)
                     /locus_tag="VHZ56_05170"
     CDS             complement(<1..1047)
                     /locus_tag="VHZ56_05170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015824746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobyric acid synthase"
                     /protein_id="HEX4297392.1"
                     /translation="MARALMFMGTGSDVGKSLLVAGLCRAFADRGLRVAPFKPQNMSN
                     NAAVTADGGEIGRAQALQARAARRSPLTAMNPVLLKPEHDSVAQLVVRGRRVGSFSAR
                     EYWARRAELLPQVVAGFDELAAAADLVLVEGAGSASEINLRATDIANFGFARPLGLPV
                     VLVGDIDRGGVIAALAGTFAVVAPEDSALIRATLVNKFRGDPALFAAGRDFIAERTGV
                     PCLGPIPWFEEARRLPAEDSLALERKEPRAGPFLVAVPHLPRIANFDDLDPLRAEPGV
                     SVVMVEPGDPLPQAADLIVLPGSKATRQDLAALRAAGWDIDIRAHHRAGKPILGICAG
                     YQMLGRTIADPLGLE"
     gene            complement(1067..2398)
                     /locus_tag="VHZ56_05175"
     CDS             complement(1067..2398)
                     /locus_tag="VHZ56_05175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006933819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042242 - cobyrinic acid a,c-diamide
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobyrinate a,c-diamide synthase"
                     /protein_id="HEX4297393.1"
                     /translation="MSLAAPPPMRSANGLVVAAPRTGSGKTLVTLGLIAALQRRGLVV
                     APAKTGPDYIDRAILARVAGSEAINLDPWAMREERLRALAYGHAAGADLLLVEGVMGL
                     FDGAADGRGSTADLAAALALPVILVVDAERQGQSIAALVAGFAGFRRDVEIAGIIVNR
                     VATTRHERLLRAALDPLGLPVLGMLPRRDTLVLPDRHLGLVLPEEVAGFDAIVAAAGA
                     TIEEYVDLNRLLSLSREIASPKAICASEKKRLPPLGQRIAIARDAAFAFIYPHLLADW
                     RAAGAELGFFSPLANESPLSNSDSVFLPGGYPELHGLELQEASRFHAGLLAARDRGAL
                     IYGECGGYMVLGEQLTDRTGRPFKMAGLLPLRSSIHEPRRTLGYRHLTHRALGSWPAD
                     LLGHEFHYSSGPVSRGTPLFTATDALGEPLPPMGMVDGRVMGSYAHVIDVA"
     gene            2431..>2955
                     /gene="cbiD"
                     /locus_tag="VHZ56_05180"
     CDS             2431..>2955
                     /gene="cbiD"
                     /locus_tag="VHZ56_05180"
                     /EC_number="2.1.1.195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007875560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-5B (C(1))-methyltransferase
                     CbiD"
                     /protein_id="HEX4297394.1"
                     /translation="MSETEPMPEDRPLRRGWTTGACATAATRSALGALLGDGFADPVT
                     ITLPGGQQPAFALAHEARGEGYAEAGIIKDAGDDPDVTHGALVLARVAPGTAGAGVTF
                     HAGDGVGTVTKPGLPIAPGEPAINPVPRRMMRETVAEVAARHGLAPDFAVTVSVRDGA
                     RLAEKTWNPRLGIVG"
BASE COUNT          478 a          959 c         1141 g          377 t
ORIGIN      
        1 ctcgaggcca agcggatcgg cgatcgtccg gccgagcatc tggtagccgg cgcagatgcc
       61 gaggatgggc ttgccggccc gatggtgggc gcgaatgtcg atgtcccagc cggcggcgcg
      121 gagggccgcg agatcctggc gcgtcgcctt ggagccgggg agcacgatca ggtcggccgc
      181 ctgcggcagc ggatcgccgg gctcgaccat gaccacgctg acgccgggtt cggcgcgaag
      241 cgggtcgaga tcgtcgaagt tggcgatgcg cggcaggtgc ggcacggcaa cgagaaacgg
      301 cccggccctg ggctctttcc gctccaaggc cagcgaatcc tcggccggca ggcggcgggc
      361 ttcctcgaac cacgggatcg gcccgagaca cggcacgccg gtgcgctccg cgatgaaatc
      421 gcgcccagcg gcgaagaggg ccggatcgcc acggaacttg ttgacgaggg tagcgcggat
      481 cagcgctgaa tcctcgggcg cgaccaccgc aaaggtgccg gccagcgcgg cgatcacgcc
      541 gccccggtcg atgtcgccga ccagcaccac gggcaggcca agcggccggg cgaagccgaa
      601 attggcgatg tcggtcgccc gcaaattgat ctcggaggcg ctgccggcgc cttccaccag
      661 caccaggtcg gcagcggccg ccaactcgtc gaagccggcc accacctgcg gcagcaattc
      721 ggcccggcgg gcccagtact cccgggccga gaaggagccg acgcgacggc cgcggaccac
      781 cagctgggcg accgaatcgt gctcgggctt gagcagaacg gggttcatcg cggtgagcgg
      841 agagcgccgg gcggcgcggg cctgcagggc ctgggcgcgg ccgatctcgc caccatcggc
      901 ggtgaccgcg gcgttgttgg acatgttctg cggcttgaag ggagcgaccc gcaggccgcg
      961 gtcggcgaag gcgcggcaga ggccggcgac gagcagcgac ttgccgacgt cgctgccggt
     1021 gcccatgaac atcagtgcgc gcgccatgcg gggtctccgg gccgctctat gccacgtcga
     1081 tcacgtgggc ataagagccc atgacgcggc catccaccat gcccattggc ggcagcggct
     1141 cgccgagcgc gtcggtggcg gtgaacagcg gagtgccccg ggagacgggg ccggaggagt
     1201 agtgaaactc gtggccgagg agatcggccg gccatgaccc tagggcacgg tgcgtcaggt
     1261 ggcggtagcc aagggtccgg cgtggttcat ggatggagct tcgcagcggc agcaggcctg
     1321 ccattttgaa tggcctgccg gtacgatccg tcagttgttc ccccaggacc atatagcctc
     1381 cgcactcacc gtaaatcagg gcgccgcggt cgcgtgcggc gaggaggccg gcgtggaatc
     1441 ggctggcttc ctgcagctca aggccatgca attccggata gccgcctgga agaaatacgg
     1501 aatcgctatt cgatagcggt gactcgttcg ccagcgggga aaagaagccc agttcggctc
     1561 cggcggcgcg ccagtcggcg agcaggtggg gatagatgaa cgcgaaggcg gcgtcccggg
     1621 cgatggcgat gcgctggccg agcggcggca ggcgtttttt ttcgctcgca catatggcct
     1681 ttggggacgc gatttcgcgc gacagcgaga ggaggcggtt gagatcgacg tactcctcga
     1741 tcgtggcgcc cgcggcagcg acgatggcat cgaagccggc gacctcttcg ggcagcacca
     1801 gaccgagatg ccggtcgggc aggacgagcg tgtcgcggcg cggcagcatg ccgaggaccg
     1861 ggagtcccag cggatcgagc gcggcccgca gcaggcgctc gtgacgggtg gtggcgacac
     1921 ggttgacgat gatcccggcg atctcgacgt cgcgacggaa accggcgaag ccggccacga
     1981 gcgcggcaat cgactggccc tggcgttcgg catcgacgac gaggatcacc ggcaaagcca
     2041 gcgccgccgc gagatcggcg gtcgagccgc gaccgtcggc ggcgccatcg aagagcccca
     2101 tgacgccctc gaccagaagg agatcggcac cggcggcgtg gccgtaggcg agggcgcgaa
     2161 gccgctcttc ccgcatggcc cagggatcga ggttgatcgc ctcgctcccc gccacccggg
     2221 cgaggatggc gcggtcgatg tagtccgggc cggtcttggc aggggcgacc acgaggccgc
     2281 ggcgctgcag ggcggcgatg aggccaagcg tcaccagcgt cttgcccgag ccggtgcgcg
     2341 gcgcggcgac gacgaggcca ttggcggagc gcatgggcgg gggcgcggca aggctcatgc
     2401 aaacggcctc cgggcccggt atagagggcc atgagcgaga ccgagccgat gcccgaggat
     2461 cgaccgctgc ggcgcggctg gaccaccggc gcatgcgcca cggcggcgac ccgttcggcg
     2521 ctgggagcgc tgctcggcga cggcttcgcc gacccggtga cgatcaccct gcccggcggg
     2581 cagcaaccgg cgtttgcgct ggcgcacgag gcgcgcggcg agggttatgc ggaggccggg
     2641 atcatcaagg atgcggggga cgatccggat gtgacgcacg gcgcgctggt gctggcccgc
     2701 gtggcgccgg gcaccgccgg agctggagtg acgttccacg ccggcgacgg ggtgggcacg
     2761 gtgaccaagc cgggactgcc gatcgccccg ggcgagccgg caatcaaccc ggtgccgcgg
     2821 cggatgatgc gcgaaaccgt cgccgaggtc gcggcccggc acgggctcgc tccggacttc
     2881 gcggtcacgg tttcggtgcg cgacggcgcg cggctggcgg agaagacctg gaacccgcgg
     2941 ctcggcattg tcggc
//
LOCUS       DATAZA010000204         7252 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_950054, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000204 DATAZA010000000
VERSION     DATAZA010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 7252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7252
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_950054"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1933
                     /locus_tag="VHZ56_05185"
     CDS             <1..1933
                     /locus_tag="VHZ56_05185"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEX4297395.1"
                     /translation="VGAAEAAETPKETWDYDVDIVVIGSGATGLPAAVRARDLGASVL
                     VIDQNYDVGGKLAHNGGLASLGGGDWVQERDRLGTDPDNLGLGKSLAPVEDLTDDPET
                     LFRDMTDWSVVDDNAVAGYRYNDPAIHRTWAYNAPKVRQFFSDNYIRWSRITVNNLGN
                     GVSKARGATAIMKLADKTDIEAGTVTRADAGDADNEKSSPFNPMYWPPAPSASGDGAP
                     GYVFGGFVISRSLEYSARKKGVQFMLNRHMDEIVREPGGAVIGVVASYSPRLNPQTGE
                     IIPSWWNNGNIDEKKDVVRIRARKAVIVGSGGYMGNINFRSMFDPRLREPSFQYNIAV
                     VGERHADASGIIAGMKVGASLAGLMQAYEHPLGSPKLMTRVGTNSHWDATFPGNPAFL
                     FVRSAGVQIDPEWVIAVNQVGQRFYNETAFAPDEIFDATYPPGTSGTNKPFKALDWRN
                     ASVEHVRANYTYSGIHPAALSMNEGSTAPNYTSGPVWAIFDQAAVDANGWELRAPYIA
                     DPPDGNFFKADSIAELSRMVMANKYQHMPLNHLEETVTNFNAAADAGKDADFEKPKMH
                     KIDKGPFYAAIMPVTHIDSYGGLRIDGNSQVLDIDGNIIPGLYAGGEASGGGRQHGIG
                     RASVQGYMAATHAMGQPVV"
     gene            1980..2522
                     /locus_tag="VHZ56_05190"
     CDS             1980..2522
                     /locus_tag="VHZ56_05190"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX4297396.1"
                     /translation="MEEDDRRMHKRALFISAGIAALLALGAATALPAVGQDASSSQVA
                     APSSSASASSPATAMSDDDLLALGKHVWSDAACSNCHGQTAAGGHSPDFPPGPNLRTS
                     GLDPQTMLQIVECGIPDSRMPAWLNGAYTTTACYGNPLGPVPAGTIVTGTYNEDQLKA
                     LVDYVQTNFMKQPMPNWTAQ"
     gene            complement(2617..3108)
                     /locus_tag="VHZ56_05195"
     CDS             complement(2617..3108)
                     /locus_tag="VHZ56_05195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004435461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEX4297397.1"
                     /translation="MPTEKTLEDLFLDTLKDIYFAEKQIVRALPKMSKAATAPELKAG
                     FDQHLQETHGHVERLEQVFEIIGEPARGKTCEAILGIIEEAKEIMDEFKDTVALDAGL
                     VSSAQAVEHYEIARYGTLKAWAKQLGRTDVVALLEATEKEEIATDKKLSQVALSDVNR
                     KAA"
     gene            complement(3226..4260)
                     /locus_tag="VHZ56_05200"
     CDS             complement(3226..4260)
                     /locus_tag="VHZ56_05200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004129441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000976 - transcription cis-regulatory
                     region binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX4297398.1"
                     /translation="MATRSKSGRVTIRTVAEDAGVSVSAVSKVLRDAYGVSEALRARV
                     QGSIARLGYRPHAAARGMRGQTYTLGFLIPDLHNPFFADILAGVNTALERTQYQTLLG
                     VSESTRQMETALVDAMIDRQMDGLMVIGPRMSNEARTRMAERIPTVLIGYHPQDVAPF
                     DTVNNDDRFGATLVVQHLVAGGYKHIAYISQELDDTEGAMVTTQRAIGFRAAMREAGL
                     SRSLQVVVAPQTSRELQGIARHMLQARNRPEAIFCWTDFIALEVLSVARELGLRVPQD
                     LAVVGYDNTAWCDLAQNALTSVDQSGQVLGLQAARLLIERIKGRETAEHLVVTPRLVV
                     RDSSRSKHKA"
     gene            4454..6790
                     /locus_tag="VHZ56_05205"
     CDS             4454..6790
                     /locus_tag="VHZ56_05205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007812306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 78 glycoside hydrolase catalytic domain"
                     /protein_id="HEX4297399.1"
                     /translation="MLAGAGSSAAAQGAPWTARMIRPLADQGVETRASFLRQTFTLSS
                     PGGAETLRISALGLYRAFINGRRVGNDQLTPGWTSYQARLSYQTYAVGDLLRAGENTI
                     DIWLGDGWYRSQMGWRANPVLNTWGSEIAAIAELTGRDGNVLLATDATWRSGLLPILK
                     SGIYLGEVYDAREETLHADQGSAPVTGFDLRHLIPHEIEGVKELDPLPVVMQKADAEG
                     RTIYDFGQNSAGYVRFTVRGDRGARVLVEHSEILDRDGVFYNENLRSAEAKLSYTLKG
                     GGEETYTPVFTFQGFRYARLTIEGKAEIVSIVSIPITSAIHPVGRFSSGNPLVNRLVD
                     NTIWSQRGNFIEVPTDCPQRDERFGWTGDAQVFSPTACYFNDSHAFLAKWLRDVMADQ
                     RPDGGIAHVSPDPFRERGAPQFYGSTGWGDAIVVVPWVLYTHYGDRGILEECLPAMLR
                     WNDFVWSISNAPIVRPPASWDGRGFTFGDWLQPQNDYLKAVPTMGDDAAATIYLYISS
                     VLTARIADVLGDTATSRRLGERAELVRKAFQKEFITGSGRVGYDDQSSYALAFLWDLI
                     PPEHIEAAKGYFKATIARAHGRIGTGFIGTPALLPALCKIGEPELAAAVFLQEEVPGW
                     LAQVKRGATTIWERWDGIKADGTIFEPQMNSYNHYAYGAVCQWLFESVAGFRPDPGLP
                     GFRHVIFEPVIVPALSPVAATHDSAAGHLAARWSLEDDRVTYDIELPEGASGTLVLDT
                     RYTDAVLDGAPLAWAAGNEKARNLLAPGAHRITFRISR"
     gene            6819..>7252
                     /locus_tag="VHZ56_05210"
     CDS             6819..>7252
                     /locus_tag="VHZ56_05210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX4297400.1"
                     /translation="MKFLTTRRAVVIGAALALTTALSSPSFADATTLSFLIDNAPSTV
                     AWANQLKTDFEAANPDIKLDIEQRPGGADGDNLIKTKLATGDMSDVFNYNSGSLFQQI
                     NPTQNLVDLSNEPWQASVLPSFKLVVTATDGTVRGAPFGAAMG"
BASE COUNT         1223 a         2570 c         2295 g         1164 t
ORIGIN      
        1 ggtcggcgcg gccgaagcgg ccgagacgcc gaaggagacc tgggactacg acgtcgacat
       61 cgtcgtgatc ggcagcggcg ccacgggatt gccggcagcc gtgcgggcgc gcgatctcgg
      121 tgcctcggtg ctggtgatcg atcagaacta cgatgtaggt ggcaagctcg cccacaatgg
      181 cggcctcgcc tcgctgggtg gcggcgactg ggtgcaggag cgcgaccggc tcggcaccga
      241 ccccgacaat ctgggcctcg gcaagtcgct cgcgccggtt gaggatttga ccgatgaccc
      301 cgagacactg ttccgcgaca tgaccgactg gtcggtggtc gacgacaatg ccgtcgccgg
      361 ctatcgctac aacgacccgg cgatccaccg gacctgggcc tacaatgccc ccaaggtgcg
      421 gcagttcttc tccgacaact acatccggtg gtcgcgcatc accgtcaaca acctcggcaa
      481 tggcgtctcg aaggcgcgcg gcgcaaccgc catcatgaag ctcgccgaca agaccgatat
      541 cgaggccggc acggtgacgc gtgccgacgc cggcgacgcc gacaacgaga agagctcgcc
      601 gttcaatccg atgtactggc cgccagctcc atcggcctcc ggcgacggag ctcccggcta
      661 tgtcttcggc ggcttcgtca tttcgcgctc gctcgaatac agcgcccgca agaagggcgt
      721 gcagttcatg ctcaaccggc acatggacga gatcgtccgc gagcccggcg gcgccgtcat
      781 cggcgtcgtc gccagctact cgccgcgcct caatccgcag accggagaaa tcattccgag
      841 ctggtggaac aacggcaata tcgacgagaa gaaggatgtc gtgcgcatcc gcgcccgcaa
      901 ggcggtgatc gtcggctcgg gcggctacat ggggaacatc aacttccgct cgatgttcga
      961 cccgcgcctg cgcgaaccgt cgttccagta caacatcgcc gtcgtgggcg aacgccacgc
     1021 cgatgcgagc ggcatcattg ccggcatgaa ggtcggcgcg tcgttggccg gcctgatgca
     1081 ggcctacgag catccgctgg gctcgcccaa gctgatgacg cgggtcggca ccaactcgca
     1141 ctgggacgcg acctttccgg gcaatcccgc cttcctgttc gtgcggtcgg cgggcgtgca
     1201 gatcgatccc gagtgggtca tcgccgtcaa ccaggtcggg cagcgtttct acaacgagac
     1261 ggcgtttgct cccgacgaga tcttcgacgc gacctatccg ccggggacgt cgggaaccaa
     1321 caagccgttc aaggccctcg actggcgtaa cgccagcgtc gagcacgtgc gtgccaacta
     1381 cacctacagc ggtatccacc cggcggcgct gtcgatgaac gagggctcga cggcccccaa
     1441 ctacacgtcg ggtccggtct gggcgatctt cgaccaggcg gccgtggacg ccaatggctg
     1501 ggagcttcgg gccccctaca ttgccgatcc gccggacggg aacttcttca aggcggacag
     1561 cattgccgag ctgagccgca tggtgatggc gaacaagtac cagcatatgc cgctgaacca
     1621 tctggaagag accgtgacga acttcaacgc cgccgccgat gccggcaagg acgccgactt
     1681 cgagaagccc aagatgcaca agatcgacaa ggggccgttc tacgcggcca tcatgccggt
     1741 gactcacatc gactcgtatg gtggcctgag gatcgacggc aattcccagg tgctcgacat
     1801 cgacggcaac atcataccgg gcctctatgc gggcggcgaa gcgagcggcg gcggacgcca
     1861 gcacggcatc ggccgcgcct cggtgcaggg gtatatggca gcgacgcacg cgatgggcca
     1921 acccgtcgtc tgacggacga ttttcggcgg gcggcgggga cttcctgccg cctgcctcaa
     1981 tggaagagga cgacagacgt atgcacaagc gtgctctttt tatcagcgcc ggtattgcgg
     2041 ccctgctggc gctcggcgcg gcgacggcgc tgccagccgt cgggcaggac gcctccagtt
     2101 cccaggtagc cgctccatct tcatccgcgt ccgcttcatc gcctgcaacg gcgatgtcgg
     2161 acgacgatct gctcgccctg ggcaagcatg tgtggagcga cgcggcgtgc tcgaactgcc
     2221 atggccagac cgcggccggg gggcacagcc cggattttcc gcctggtcca aacctccgca
     2281 cgtcaggcct cgatccgcag accatgctgc agattgtcga gtgcggtatt ccggattcgc
     2341 ggatgccggc ctggctcaac ggcgcctata cgaccaccgc ctgctacggc aaccctctgg
     2401 gtccggttcc ggccggcacc atcgtcacgg gaacctacaa cgaggaccag ctgaaagccc
     2461 tggtcgacta tgtccagacc aatttcatga aacagccgat gcccaactgg acggcgcaat
     2521 agcgccgcga cttcgcgctg ttgcccaaag gcaagacatc agggccggcg tcatgcgccg
     2581 gccctgattg ctatcacgcg agatttgtcg gcgtcgtcac gccgccttgc ggttgacgtc
     2641 gctcagcgcc acctggctca gcttcttgtc ggtggcgatt tcttccttct cggtcgcctc
     2701 gagcagcgcc accacgtcgg tgcggcccag ctgtttcgcc caggccttca gcgtgccgta
     2761 gcgcgcgatc tcgtagtgct cgaccgcctg cgccgacgac acgagcccgg cgtcgagcgc
     2821 gacggtgtcc ttgaactcgt ccatgatctc cttggcctcc tcgatgatgc cgaggatcgc
     2881 ctcgcaggtc ttgccccgcg ccggctcgcc gatgatctcg aacacctgct cgaggcgctc
     2941 gacgtggccg tgggtctcct gcaggtgctg gtcgaacccg gccttgagct ccggcgccgt
     3001 ggcggccttc gacatcttgg gcagggcgcg gacgatctgc ttttccgcga agtagatgtc
     3061 cttgagggta tcgaggaaca gatcctcgag ggtcttttca gtgggcatgg tcaaactcca
     3121 gctatgaggg atgctggcgg aacggcacgc gtcccgcttc gcctaggaag ttctcgtccg
     3181 gagtttggtt cccgcgtcgg ccgggcccgg catctctgcg gcaggtcagg ccttgtgctt
     3241 ggaccgcgag ctgtcgcgca ccacgaggcg cggggtgacg accaggtgct cggccgtttc
     3301 gcgacccttg atccgctcga tcagcagccg cgccgcctgc aggcccagca cctggcccga
     3361 ctggtcgacc gaggtcagcg cgttctgcgc caggtcgcac caggcggtgt tgtcgtaccc
     3421 caccaccgcg aggtcctgcg gcacccgcag cccgagctcg cgggccacgc tcagcacctc
     3481 cagcgcaatg aaatccgtcc agcagaagat cgcctcgggc cggttgcgcg cctgcagcat
     3541 gtggcgggcg atgccctgca gctcgcgcga ggtctgcggc gccaccacca cctgcaggct
     3601 gcggctgagg ccggcctccc gcatggcggc acggaagccg atcgcccgct gcgtcgtcac
     3661 catggcgccc tcggtgtcgt cgagttcctg gctgatatag gcgatgtgct tgtagccgcc
     3721 ggcgaccaga tgctgcacca ccagcgtcgc cccgaacctg tcgtcgttgt tgacggtgtc
     3781 gaacggcgcc acgtcctgcg gatggtagcc gatcagcacc gtcgggatgc gctcggccat
     3841 ccgggtccgc gcctcgttcg acatccgcgg cccgatcacc atcagcccgt ccatctgccg
     3901 gtcgatcatg gcgtcgacca gcgccgtctc catctgccgc gtcgactcgc tgaccccgag
     3961 cagcgtctgg tactgcgtcc gctccagcgc cgtgttcacc ccggcgagga tgtcggcgaa
     4021 gaacgggttg tgcaggtccg gaatgaggaa acccagcgta taggtctgcc cgcgcatgcc
     4081 gcgggccgcc gcatgcgggc ggtagccgag ccgggcaatc gagccctgca ccctggcgcg
     4141 cagtgcctcg ctgaccccat aggcgtcgcg cagcaccttg ctcaccgccg acaccgacac
     4201 gccggcgtcc tcggccacag tgcggatcgt gacccgtccc gacttgctcc tggtcgccat
     4261 ctgcagcgtc tctcccgggc gcagccttag caagatcagg cgcttccgtc gaactgaccg
     4321 actttgcgcg aacctgcacg aaaatgcttg atccaaattc gtagaacggt atacgtagct
     4381 ggaaacgtag aacggtgcac agccgtcacg gggcggcaaa agcccaccag ggaggacgac
     4441 agtgaacgac gcgatgctcg ccggagcagg ctcgagcgcg gctgcgcagg gcgctccctg
     4501 gaccgcccgc atgatacggc cgctggccga ccagggcgtc gaaacgcgcg ccagcttcct
     4561 ccgccagacc ttcaccctct cctccccggg cggggccgag acgctgcgga tcagcgctct
     4621 cggcctctac cgggccttca tcaacggccg gcgggtcggc aacgaccagc tgaccccggg
     4681 ctggaccagc taccaggcac ggctcagcta ccagacctat gcggtcggcg acctgctccg
     4741 ggccggcgag aacaccatcg acatctggct gggcgacggc tggtaccgct cgcagatggg
     4801 ctggcgcgcc aatccggtgc tcaacacctg gggctcggag atcgcggcga tcgccgagct
     4861 taccggccgc gatggcaacg tgctgctggc gaccgacgcc acctggcgga gcggcctgct
     4921 gcccatcctc aagagcggca tctatctcgg cgaagtgtac gacgcccgcg aggagacgct
     4981 gcacgccgac cagggcagtg cgcccgtcac cggcttcgac ctgcgccatc tgatcccgca
     5041 cgagatcgag ggcgtcaagg agctcgaccc gctgccggtc gtcatgcaga aggccgacgc
     5101 cgaaggccgc acgatctacg atttcggcca gaacagcgcc ggctatgtgc gcttcacggt
     5161 gcgcggcgat cgcggcgccc gcgtgctcgt cgagcattcc gagatcctcg acagggacgg
     5221 cgttttctac aacgaaaacc tccggtcggc cgaggcgaag ctgtcctaca cgctcaaggg
     5281 cggcggcgag gaaacctaca ccccggtctt caccttccag ggcttccgct acgcgcggct
     5341 gaccatcgag ggcaaggccg agatcgtgtc gatcgtctcg atccccatca cctcggcgat
     5401 ccatccggtc ggccgcttca gttccggcaa tccgctggtg aaccggctgg tcgacaacac
     5461 catctggtcg cagcgcggca acttcatcga agtgcccacc gactgcccgc agcgtgacga
     5521 gcgcttcggc tggaccggcg acgcgcaggt gttctcgccg accgcctgct acttcaacga
     5581 cagccacgcc ttcctcgcca aatggctgcg cgacgtcatg gccgaccagc ggccggacgg
     5641 cggcatcgcc cacgtttcgc ccgacccctt ccgcgagcgt ggcgccccgc agttctacgg
     5701 ctcgaccggc tggggcgacg ccatcgtcgt ggttccctgg gtgctctaca cccactacgg
     5761 cgaccgcggc atcctcgaag agtgcctgcc ggcgatgctg cgctggaacg acttcgtctg
     5821 gtcgatctcc aacgccccca tcgtccggcc gccggccagc tgggatggcc gcggcttcac
     5881 cttcggcgac tggctgcagc cgcagaacga ctacctcaag gccgtcccga ccatgggcga
     5941 cgacgctgcg gcgacgatct acctctacat ttcctcggtg ctgaccgccc gcatcgccga
     6001 cgtgctcggc gataccgcca ccagccggcg gctcggcgaa cgcgccgaac tcgtgcgcaa
     6061 ggccttccag aaggaattca tcaccggctc cggccgggtc ggctacgacg accagtcgtc
     6121 ctacgccctc gccttcctgt gggacctcat tccgcccgag cacatcgagg cggcgaaggg
     6181 ctacttcaag gccaccatcg cgcgcgccca cggccgcatc ggcaccggct tcatcggcac
     6241 cccggcgctg ctgccggcgc tctgcaagat cggcgagccg gaactggccg ccgccgtctt
     6301 cctgcaggaa gaagtgccgg gctggctggc gcaggtgaag cgcggcgcca ccaccatctg
     6361 ggagcgctgg gacggcatca aggccgacgg caccatcttc gagccgcaga tgaactccta
     6421 caaccactat gcctacggcg ccgtctgcca gtggctgttc gagagcgtcg ccggcttccg
     6481 gcccgatccc ggcctgccgg ggttccgcca tgtgatcttc gagccggtga tcgtgccggc
     6541 cctgtcgccg gtcgccgcca cccacgactc cgccgccggc catctcgccg cccgctggtc
     6601 gctcgaggac gaccgcgtca cctacgacat cgagctgccg gaaggcgcca gcggcacgct
     6661 ggtcctcgac acccgctaca ccgacgccgt cctcgacggc gcgccgctcg cctgggcggc
     6721 cggcaacgag aaagcgcgca acctgctcgc gcccggagcg caccgcatca cgttccggat
     6781 cagcaggtaa gccaaagaac cgcaacggga ggactagaat gaagttcctg accacacggc
     6841 gcgccgtcgt catcggcgct gccctggcgc tgaccaccgc gctgtcgtcg cccagctttg
     6901 ccgacgccac gacgctgagc ttcctcatcg acaacgcccc gagcacggtc gcctgggcca
     6961 accagctgaa gaccgatttc gaggccgcca accccgacat caagctcgac atcgagcagc
     7021 gtcccggcgg cgccgacggc gacaatctga tcaagaccaa gctggcgacg ggcgacatgt
     7081 ccgacgtgtt caactacaat tcgggctcgc tgttccagca gatcaacccg acgcagaacc
     7141 tcgtcgatct cagcaacgag ccgtggcagg ccagcgtgct gccctcgttc aagctggtgg
     7201 tgacggcgac cgacggcacc gtgcgcggcg cgccgttcgg cgccgccatg gg
//
LOCUS       DATAZA010000205         3316 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3387382, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000205 DATAZA010000000
VERSION     DATAZA010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3316
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3387382"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..348)
                     /locus_tag="VHZ56_05215"
     CDS             complement(<1..348)
                     /locus_tag="VHZ56_05215"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEX4297401.1"
                     /translation="MRLSRSLSVAALATLAGLAAVPACAAGLVQVVAAENFYGDLATQ
                     IGGSHVAVTSVLSNPDDDPHLFESSPSTARLLAAADIVISNGVDYDPWMDKLLSASTG
                     TARTVIVAADLVGK"
     gene            526..972
                     /locus_tag="VHZ56_05220"
     CDS             526..972
                     /locus_tag="VHZ56_05220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007877005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HEX4297402.1"
                     /translation="MAHPDSSHEHDGHDHVWADDLTRNQELVLGALAHAQAPLSAYDI
                     LDRLRGDGLRAPLQVYRALDKLTERGLAHRLESLNAFVCCADAARHRTGTIAFAICEA
                     CGRVEEFAEPAIEARLDGWSKANGFAASRKTIELRGRCRDCVSRPS"
     gene            complement(956..2689)
                     /locus_tag="VHZ56_05225"
     CDS             complement(956..2689)
                     /locus_tag="VHZ56_05225"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX4297403.1"
                     /translation="MLPFGARPLRTFALFIGLPAFLLYVLSAGLVIAALAIMAGEINR
                     LADDRGFTAMHAALDSVLNELSGTASDNGTWNEAYLNAVVNSDPAWMDTTWGTTARLG
                     EPYDNVLVTSQDGTIDFGENNAGAIKGNIVARYPAAKTMLSDLDKGIAATGDATTVSR
                     FAADPDGPVGLAAISIHQSTPGQMGVPRQTRRILWIARHLSPALLQDLAARYQMPVAT
                     LVTTPAADSSSITLADADGNVAGTLAWVSDRPGDAAFDHAVLVATGVFFLIGVALALA
                     LGVLRRLMLRRAEATLASYRALAQGVAPAASPAPKRPAAAAPAAFGTAGEPLLDLPLD
                     GITAGDFEIEYQPVFDLRAESMVGVEALLRWRRADGSVVPQESLAPATCAALLDRVGL
                     LGIRRASEEVAPLLGLMLTIAVSPVQILSSVFPEKVIGTLGATGFPARRLQVSIDAAL
                     LPPLAQLRPAVLALRRSGILVALNNFALGTGTVDVADSRLVDRVRLAPALTTGVDANP
                     ARRTYLAAHIEVAHAAGLGITVPAAERPEEVGKLLRLGCREFQGGLFAPPMPVEALTR
                     LMLAPAVRKAG"
     gene            complement(2818..>3316)
                     /locus_tag="VHZ56_05230"
     CDS             complement(2818..>3316)
                     /locus_tag="VHZ56_05230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008872355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4297404.1"
                     /translation="TDMPAAERADRAQQMLRKVGLGPEHFNRYPHMFSGGQRQRIAIA
                     RALMLNPSLLVLDEPVSALDLSVQAQILNLLADLQDEFQLTYVFISHDLSVVRYIADD
                     VMVMYLGDVVERGTREAVFADPQHSYTRALFAATPRADVEHIKARLARRAAADAARSG
                     AAPAP"
BASE COUNT          550 a         1014 c         1312 g          440 t
ORIGIN      
        1 cttgccgacc aggtcggcgg cgacgatgac ggtgcgggcc gtaccggtcg aagccgagag
       61 cagcttgtcc atccacggat cgtagtcgac gccgttggag atgacgatat cggcggcggc
      121 gagcaggcgg gcggtggacg ggctcgactc gaacagatgc ggatcgtcgt cggggttcga
      181 gaggaccgag gtgacggcga cgtggctgcc gccgatctgg gtcgcgagat cgccgtagaa
      241 attctcggcg gcgacgacct ggacgaggcc ggcagcgcag gcggggacgg cggcgaggcc
      301 ggcaagagtc gcgagggcgg cgacggaaag acttctggag agtcgcacgg cttgcccctt
      361 tgcgatccgg actggccaag gcccgaactt gacgttataa cattacgtac acagatgaga
      421 cgccggctgt caattgcgcc ttggtgcgaa cccggagcgg ggcagcggcg agcgtccaag
      481 gtggcgggca atggccccaa acccgaaagg cagttaggtt cgcgcatggc acatccggac
      541 tcgagccacg agcatgacgg ccacgaccat gtgtgggccg acgatctgac gcgcaaccag
      601 gagctggtgc tgggggccct cgcccatgcg caggcgccgc tgtcggccta cgacatcctc
      661 gaccggctgc gcggcgacgg gctgcgggcg ccgctgcagg tgtaccgggc gctcgacaag
      721 ctgaccgagc gcgggctggc gcaccggctg gaatcgctga acgccttcgt ctgctgcgcc
      781 gacgcggcgc gccaccgcac cggcaccatc gcttttgcga tctgcgaggc gtgcggccgg
      841 gtggaggagt tcgccgagcc ggcaatcgaa gccaggctcg atggctggag caaggccaac
      901 ggctttgcgg cgtcgcgcaa gacgatcgag ctgcggggcc gctgccggga ctgcgtcagc
      961 cggccttcct gacggccggc gccagcatca ggcgggtcag ggcctcgacc ggcatcggcg
     1021 gcgcaaacag gccgccctgg aactcgcgac agccaagacg cagcagcttg ccgacttcct
     1081 cgggacgctc ggcggccggc acggtgatgc cgagcccggc ggcatgggcg acctcgatgt
     1141 gggcggcgag gtaggtgcgg cgggccgggt tggcatcgac gccggtggtc agcgcgggcg
     1201 ccaggcggac gcgatcgacg aggcgcgaat cggcgacgtc gacagtgccg gtgccgagcg
     1261 cgaaattgtt gagcgcgacg aggatgccgg agcggcggag cgccagcacc gccggccgca
     1321 actgcgcgag cgggggcagc agggcggcgt cgatcgagac ctgcaggcgc cgcgccggaa
     1381 agccggtggc gccgagcgtg ccgatgactt tttccgggaa cacgctgctg aggatctgga
     1441 ccggactgac ggcgatggtc agcatcagcc cgagcagcgg cgccacctct tcgctggcgc
     1501 ggcggatgcc caggagcccg acgcgatcga gcagggcggc gcaggtggcg ggcgcgaggc
     1561 tctcctgcgg caccacggag ccgtcggcgc gacgccagcg cagcagcgcc tcgaccccca
     1621 ccatgctctc ggcgcgcaga tcgaagacgg gctggtattc gatctcgaaa tcgccggcgg
     1681 tgatgccgtc gagcggcagg tcgagcaggg gctcgccggc ggttccaaag gccgcaggag
     1741 cggcagccgc ggggcgtttg ggcgccggcg atgcggcggg cgcgacgccc tgcgcgaggg
     1801 cgcgatagga ggcgagcgtg gcctcggcgc ggcgcagcat cagccggcgc agcacgccga
     1861 gcgccagcgc cagcgcgaca ccgatgagga agaagacgcc ggtggcgacc agcacggcgt
     1921 gatcgaaggc ggcgtcgccg ggacgatcgg agacccaggc cagcgtgccg gcgacgttgc
     1981 cgtcggcgtc ggcgagggtg atcgaggagg agtcggcggc cggtgtggtg accagcgtgg
     2041 cgaccggcat ctggtagcgc gccgcgagat cctgcagcag cgccgggctc aggtgccggg
     2101 cgatccagag aatgcggcgg gtctgccgcg gcacgcccat ctggccgggc gtcgattgat
     2161 ggatggagat ggcggcgaga ccgacgggac catcgggatc ggcggcaaag cggctgacgg
     2221 tggtggcgtc gccggtcgcc gcgatgccct tgtcgaggtc ggacagcatg gtcttggcgg
     2281 caggatagcg ggcgacgatg ttgcccttga tggcgccggc attgttctcg ccgaagtcga
     2341 tggtgccgtc ctgggaagtg acgaggacat tgtcgtaggg ctcgccgagg cgggcggtgg
     2401 tgccccaggt ggtgtccatc caggccgggt cggagttgac cacggcgttg aggtaggcct
     2461 cgttccaggt gccgttgtcg gaggcggtgc cgctcagttc gttgaggacg gaatcgaggg
     2521 cggcgtgcat ggcggtgaaa ccgcgatcgt cggcgaggcg gttgatctcg ccagccatga
     2581 tggcgagggc ggcgatgacc agcccggcgc tgaggacgta gagcaggaac gccggcaggc
     2641 cgatgaacag cgcaaaggtg cgcagcggcc gcgcgccgaa gggcagcaca acgccatccg
     2701 gcagctgtgg ctcagcgacg gcggcaggcg gagtctggtc ggggggcctg gccaaggcgc
     2761 gccgtatcct ctcgtcaaac gacaagaaaa tggtaaccaa gcggacttaa tttccggcta
     2821 aggcgccggc gcggccccgg aacgggccgc atcggcggcg gcgcggcggg cgagacgcgc
     2881 cttgatgtgc tcgacatcgg cacgcggcgt cgcggcgaac agcgcgcggg tatagctgtg
     2941 ctgcggatcg gcgaaaaccg cctcgcgggt tccccgctcc accacgtcgc cgaggtacat
     3001 caccatgacg tcgtcggcga tgtagcgcac caccgacaaa tcgtggctga tgaagacata
     3061 ggtcagctgg aactcgtcct gcaggtcggc gaggagattg aggatctgtg cctggacgga
     3121 gaggtcgagg gcggagaccg gctcgtcgag caccagcagc gaagggttga gcataagggc
     3181 gcgggcgatg gcgatgcgct ggcgctggcc gcccgagaac atgtgcggat agcggttgaa
     3241 gtgctcggga ccgagcccga ccttgcgcag catctgctgg gcccggtcgg cgcgctcggc
     3301 ggcgggcatg tcggtg
//
LOCUS       DATAZA010000206         4031 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3851371, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000206 DATAZA010000000
VERSION     DATAZA010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4031
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3851371"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2493)
                     /gene="dnaE"
                     /locus_tag="VHZ56_05235"
     CDS             complement(<1..2493)
                     /gene="dnaE"
                     /locus_tag="VHZ56_05235"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEX4297405.1"
                     /translation="MPGPGFIHLHIHSAYSLLEGALKLATLLDLAKADKQPALGVADT
                     NNLFGALEFSEKAAGKGVQPLLGAELVVDFEPPGERIIERAHDRGQFGKGGVVLIAQT
                     EAGYRNLSRLVSRAYLEGDPGRPAAQIGWLDEDSIGGILCLSGGLEGAIDPYLAQGLD
                     GKGEQRLEALRATFGDRLYVELQRHGGPQGYASEERLIDYAYRRGVPLVATNEPYFAG
                     RSDYDAHDALLAIAAGSVVAQTARRKLTPEHYFKSREEMAALFADLPEALASSVEIAQ
                     RVSYRPRTRGPILPRFAASPEQTEEEGLAAEADRLRVEAREGLQRRFEKHGMAEGFTA
                     EQYRERLDFELGVIIKMKYPGYFLIVADFIQWAKAQDIPVGPGRGSGAGSLVAYALTI
                     TDLDPLRYDLLFERFLNPDRISMPDFDIDFCQDRRGEVIRYVQQKYGEGQVAQIITFG
                     TLQARAVVRDVGRVLQMPYGQVDRISKLIPANPANPVTLAQALDMEPQLKAMRDGDET
                     VAELLAVAQKLEGLYRHASTHAAGIVIGERPLTELVPMYRDPRSDMPVTQYSLKWVEP
                     AGLVKFDFLGLTTLTVLDKAVKMINRNGTKFALTDIPIDDGPTFQNMIKGDVSAVFQV
                     ESPGMRRALVDMRPDRFEDIIALVALYRPGPMANIPTYCARKRGDEPVEYLHPLLKPI
                     LEATYGVITYQEQVQQVAKSLAGYTLAEADLLRRAMGKKIKAEMDAQRGRFLEGAETH
                     SGIGRGLANTIFDACAKFAEYGFNRSHSAPYAYITYQTAYLKTHFFQEFMAASMTYVM
                     GNTDKLNEFREDAKKHGIQIMAPSVNTSDAVFN"
     gene            2803..3120
                     /locus_tag="VHZ56_05240"
     CDS             2803..3120
                     /locus_tag="VHZ56_05240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297406.1"
                     /translation="MFKIVTIALLVSATPALAAPDRATAISTMAALYRSVDVCGALLD
                     RTKLSAYADSIRPAGDALFNVDLFRATRDLDTAQKTWTKDQTDAFCQAEAKMAQTLGV
                     TLQ"
     gene            3117..3932
                     /locus_tag="VHZ56_05245"
     CDS             3117..3932
                     /locus_tag="VHZ56_05245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HEX4297407.1"
                     /translation="MNQLEKGRAFRALHERQRLFVIPNPWDGGTAKLLASMGFEALTT
                     TSAGIAFGLGRPDGAISRDESLANARLIVDSVDIPVAADLENGFGHRPEDAAETIRRA
                     AEIGLVGGSIEDATGDPAHPIYDLALAVERVAAAAEAARGLDFPFTFVARAENYLHGR
                     ADLDDTLRRLQAYENAGADVLFAPGLPGLEAIRTTVQSLRRPLNVVRGGPGPSLDELE
                     AAGVRRVSVGGAFSRLALTAVRNAAAELLSSGTFGFAEGLMSTAEAATIMAKR"
BASE COUNT          631 a         1438 c         1266 g          696 t
ORIGIN      
        1 gttgaacacc gcatccgagg tgttgaccga cggcgccatg atctggatgc cgtgcttctt
       61 ggcgtcctcg cggaattcgt tgagcttgtc ggtgttgccc atgacgtagg tcatggaggc
      121 cgccatgaac tcctggaaga agtgcgtctt caggtacgcc gtctggtagg tgatgtaggc
      181 atagggcgcc gaatgcgagc ggttgaagcc gtattcggcg aatttcgcgc aggcatcgaa
      241 gatggtgttc gcgagacccc tgccgatgcc ggaatgcgtc tcggcgccct cgaggaaacg
      301 gccgcgctgg gcgtccatct ccgccttgat cttcttgccc atggcgcgcc gcagcaggtc
      361 cgcctccgcc agcgtgtagc cggcgagcga cttggccacc tgctgcacct gctcctggta
      421 ggtgatgacc ccataggtcg cctcgaggat cggcttcagc agcgggtgca ggtattccac
      481 cggctcgtcg ccgcgcttgc gcgcgcaata ggtcgggatg ttcgccatcg gccccggccg
      541 gtagagcgcg accagcgcga tgatatcctc gaaccggtcc ggtcgcatgt cgacaagcgc
      601 ccgccgcatc cccgggcttt ccacctggaa caccgccgag acgtcgccct tgatcatgtt
      661 ctggaacgtc ggcccatcgt cgatgggaat gtcggtgagg gcgaatttgg tgccgttgcg
      721 gttgatcatc ttcaccgcct tgtcgagcac cgtcagcgtc gtcagcccga ggaaatcgaa
      781 cttcaccagc cccgccggct ccacccattt gagcgaatac tgggtgaccg gcatgtccga
      841 gcgcggatcg cggtacatcg gcaccagctc cgtcagcggc cgctcgccga tgacgatccc
      901 ggctgcgtgc gtcgaggcgt gccgatagag gccctcgagc ttctgcgcca ccgccagcag
      961 ctcggcgacc gtctcgtcgc cgtcccgcat ggccttcagc tgcggctcca tgtcgagcgc
     1021 ctgcgccagc gtcaccgggt tggccggatt ggccgggatc agctttgaaa tgcggtcgac
     1081 ctgcccgtac ggcatctgca ggacgcgccc gacgtcgcgc accacggccc gcgcctgcag
     1141 cgtcccgaac gtgatgatct gcgccacctg cccttcgccg tacttctgct ggacgtagcg
     1201 gatcacctcg ccgcgccggt cctggcagaa gtcgatgtcg aagtccggca tcgagatgcg
     1261 gtcgggattg aggaagcgct cgaacagcag gtcgtagcgc aaggggtcga ggtcggtgat
     1321 ggtcaacgca taggcgacca gcgagccggc gccggacccg cgccccggtc ccaccgggat
     1381 atcctgcgcc ttggcccact ggatgaagtc ggcgacgatc aggaaatagc cggggtattt
     1441 catcttgatg atgaccccga gctcgaaatc cagccgctcg cgatactgct cggcggtgaa
     1501 cccctcggcc atgccgtgct tctcgaagcg ccgctgcagc ccttctcgcg cctcgacccg
     1561 cagccggtcc gcttccgcgg cgagcccctc ctcctcggtc tgctccggtg aagcggcaaa
     1621 ccgcggcagg atgggcccgc gcgtccgtgg tcggtagctt acccgctgcg cgatctcgac
     1681 gctgctggcc agcgcttccg gcaggtcggc gaacagcgct gccatctcct cgcgcgactt
     1741 gaaataatgt tctggagtga gcttccggcg cgccgtctgc gccaccaccg agcctgccgc
     1801 gatcgccagc agcgcgtcat gcgcgtcgta gtcgcttcga ccggcgaaat agggctcgtt
     1861 ggtcgccacc agcggcactc cccgccgata ggcatagtcg atcagccgct cctcgctggc
     1921 gtagccctgc ggcccgccgt gccgctgcag ctcgacgtag aggcgatcgc cgaatgtcgc
     1981 ccgcagcgct tcgagccgct gttcgccttt gccgtccagc ccctgcgcga ggtacgggtc
     2041 gatggcgcct tcgagcccgc ccgaaaggca gaggataccg ccgatgctgt cttcgtcgag
     2101 ccagccgatc tgtgccgccg gccggcccgg atcgccctcg agataggccc ggctcaccag
     2161 ccgcgacagg ttgcggtagc ccgcctccgt ctgggcgatc agcaccaccc cgcccttgcc
     2221 gaactggccg cggtcgtgcg cccgctcgat gatgcgctcg ccgggcggct cgaaatcgac
     2281 caccagttcc gcgcccagca gcggctgcac ccccttgccc gccgccttct ccgaaaactc
     2341 gagcgccccg aacagattgt tggtgtcggc gacgccgagc gccggctgct tgtcggcctt
     2401 ggccaggtcg agcagcgtgg cgagcttcag cgcgccctcg agcagcgaat aggcagaatg
     2461 gatgtgaagg tggatgaagc cggggccggg catggtgtgt ccttaggccg ccgggcaaaa
     2521 tgggccaacc cggcagccgt tcaatccaca ggtcacacga gtcggctggc catatccatc
     2581 cacgacagaa gcgccccggt gaagccgacg atcgccacca atgccatcag gtccttgagg
     2641 aaaaaccgca tcgcaacctc cgttgtttct gttttgttct tatatgttcc ctttctgttt
     2701 acgtccagcc acaacggtgt aaccgtgaat caagcgttaa cgcccggact tgtgagccgg
     2761 tacgcccttt tgcttcgggc ggcttttgct atgaatggca ccatgttcaa gatcgtcacc
     2821 atcgcccttc tcgtctccgc cacccccgct ctcgccgcac ccgaccgggc cactgccatt
     2881 tcgacgatgg cggccctcta ccggtcggtc gacgtctgcg gcgccctgct cgaccgcacc
     2941 aagctcagcg cctacgccga ttccatccgg ccggccggcg acgcgctgtt caacgtcgat
     3001 cttttccgcg ccaccaggga tctggacacg gcgcagaaga cctggaccaa ggaccagacc
     3061 gacgcctttt gccaggccga ggcgaagatg gcccagacgc tcggcgtgac gctgcagtga
     3121 accagctcga aaagggccgc gccttccgcg ccctgcacga gcgccagcgg ttgttcgtca
     3181 tccccaatcc atgggacggc ggaacggcaa agctgctggc atcgatgggc ttcgaggcgc
     3241 tgaccacgac gagcgccggc atcgccttcg gcctgggccg acccgacggc gccatcagcc
     3301 gcgacgagag cctcgccaac gcccggctca tcgtcgactc ggtcgacatc cccgtcgccg
     3361 ccgatctcga aaacggcttc ggccatcgcc ccgaggacgc cgccgagacc attcgccgtg
     3421 ctgccgaaat cgggctcgtc ggcgggtcga tcgaggacgc gaccggcgac cccgcccacc
     3481 cgatctacga tctcgctctc gccgtcgagc gcgtcgccgc cgcagccgag gcggcgcgag
     3541 gactcgattt tcccttcacg ttcgtggccc gcgccgagaa ctatcttcat ggacgagccg
     3601 acctcgacga cacgctgcgt cggctgcagg cctacgagaa cgccggcgcc gacgtgctgt
     3661 tcgcgcccgg cctccccggc ctcgaggcga tccgcaccac ggtgcaaagc ctccgccggc
     3721 ccctcaacgt cgtgcgcggc ggcccgggcc ccagcctcga tgaactcgaa gcggccggcg
     3781 tccgtcgcgt cagcgtcggc ggtgccttct cgcggctggc cctgacggcc gtccgcaacg
     3841 ccgccgccga gctactgtcg agcggcacgt ttggcttcgc ggagggcctg atgagcacgg
     3901 ccgaggccgc caccatcatg gcgaagcgct gagccgtcgc gcccgctcgg cgatttcgag
     3961 gcaggcccgc ccgtgatgat acggaccctt ccagaagccg atcttgggca acccggccgg
     4021 ccgcccgtcc g
//
LOCUS       DATAZA010000207         4597 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_950438, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000207 DATAZA010000000
VERSION     DATAZA010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4597
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_950438"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..3054
                     /locus_tag="VHZ56_05250"
     CDS             <1..3054
                     /locus_tag="VHZ56_05250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX4297408.1"
                     /translation="YQLLPVAALPDVDFPVISVSASLPGASPQTMSTSVATPLIKQFS
                     TIPAIDTMTARSSQGSTSIVIQFDLSRNIDQAAADVQAAIARTTRQLPANMTAPPSYR
                     KSNPADAPIMLISLQSDSQTLTQLDTYGEDVMSPALSQLDGVGEVQVFGAKKYAVRVD
                     VNPSALNARGIGLDQLTTAIGNQNSIAPVGTIANNSQQMAIEADTQQTNAAQFSQLIV
                     ADPGGKPVRLGDVAHVTDSVANTQTASTYDGRPSIVLAVLRQPGANTVAVANTVKAML
                     PKFLADLGPTAKINILNDRSTSIQSAVNDVEMTLAITIGLVVLVIFMFLRRVTATLIP
                     TLAVPTSLVLTFGAMYVLGFSIDNISLLGLTLAVGLVVDDAIVMLENIVRHIEEGMKP
                     MEAALAGSREIGFTIVSITASLVAVFLPVLLMGGVVGKIFNEFAMVVTIAIVASSLIS
                     LTLTPMLCARLPAHNPSAAHGKKPVFERIFASIIAGYAWLLDLGLKAKPVVVLIFIGT
                     IVASALMFENINKGFLPNTDIGLVSISTQARQDISFGAMQKLQDAVASVVAKEPFVAH
                     MSSSVGGGFGSSSLNSGSMYVQLKDKSLRPDMDTVLGALRRDMGKVPGISSVPIAVQD
                     LQIGGRSSRAQYQYVVQSVDADQLFQWSNKLEAAMAADTTHFADVSTDLQDNALQANL
                     VVDQAKASLLGITAAQLRNTLYDGFGANQASTIYGAGDSYEVIVELDPSIPWTPEMLN
                     QIQVKSASGALVPLSSFAQIERTNGLLSISQQGQLPAVTLSFNLPPNEALGTAVDQLT
                     TLKQQLNVPATISTTFGGTAQVFEQALANQGLLLGAAVLTIYIVLGILYESFIHPLTI
                     LTGLPAAAAGALLSLEIFHMDLSVIAIIGILMLIGIVKKNAIMMIDFALQRKKAGATP
                     LEAIREACLIRFRPIMMTTLAALMGTLPIALGTGASAELRQPLGVAVVGGLIVSQLLT
                     LFITPVIFLYMEAFSQALTRFWASLRGRGRPIEAPAAVEIASAAE"
     gene            3051..3860
                     /locus_tag="VHZ56_05255"
     CDS             3051..3860
                     /locus_tag="VHZ56_05255"
                     /inference="COORDINATES: protein motif:HMM:NF017970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1003 domain-containing protein"
                     /protein_id="HEX4297409.1"
                     /translation="MMSRLEVPASAASDPPPVAATDVAAPAPLVWGTPLQPAGSPLSA
                     RCAITGVDLRAGEGVTFASVRAPLAERIKVDYPFLDPADLIDAAILGIYRARYVEEVL
                     RRERGGITDIEQQVIDSLGDRHIATTDIESTITREDHWTGRLFDTVAAFGSSWALLGG
                     LAAAGLLLVGAATSPRFGIYPLVLLSLVLAAVAALETPLILMGQRRQDERDRRRSQNV
                     YRVSLRAELELRHLQEQLDHLAEAPRERPPMPAAGSGPHDEGEAPDTRSTA"
     gene            complement(3864..>4597)
                     /locus_tag="VHZ56_05260"
     CDS             complement(3864..>4597)
                     /locus_tag="VHZ56_05260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008191240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX4297410.1"
                     /translation="AHRGLEPMPVQNLELSSAFDGEASQSLTIQAYSKLRSLIISGAL
                     APGQRLKVEQLRERIEVGATPIREALSLLTSEGLVERLDKRGFRVSGVSLEEYDDLHR
                     TRCWLEEHALRDSIARGDQGWEDRLVLVTHRLRRLPRTVSDGQGTRSNPEWEHMHKLF
                     HMSLLAASPSPTLLQFCDQLHDRLNRYRSVAATGAPGPRDWKSEHEAIAEAAIDRNAD
                     LAVERLLEHYARTGSILHGTLSTLG"
BASE COUNT          718 a         1699 c         1418 g          762 t
ORIGIN      
        1 taccagctgc tgccggttgc cgccctgccg gacgtcgatt tcccggtgat ctcggtgtcg
       61 gcgtcactgc ccggcgcctc gccgcagacc atgtcgacgt cggtcgcgac gccattgatc
      121 aagcagttct cgaccatccc ggccatcgac accatgacgg cgcggagctc gcagggctcg
      181 acctcgatcg tcatccagtt cgacctcagc cgcaacatcg accaggccgc cgccgacgtg
      241 caggccgcca tcgcgcgcac cacccggcag ctgccggcca acatgaccgc gccgccgtcc
      301 taccggaagt cgaatccggc cgacgccccg atcatgctga tctcgctgca gagcgacagc
      361 cagacgctga cccagctcga cacctacggc gaggacgtca tgtcgccggc gctgtcgcag
      421 ctcgacggcg tcggcgaggt gcaggtgttc ggcgccaaga agtacgcggt gcgcgtcgac
      481 gtcaatccgt cggccctcaa cgcccgcggc atcggcctcg accagctgac caccgccatc
      541 ggcaaccaga actcgatcgc gccggtcggc accatcgcca acaacagcca gcagatggcg
      601 atcgaggcgg acacccagca gaccaacgcc gcccagttca gccagctgat cgtcgccgat
      661 ccgggcggca agccggtgcg gctgggcgat gtggcgcacg tcaccgattc cgtcgccaat
      721 acccagactg cctcgaccta tgacggccgg ccttcgatcg tgctcgccgt gctgcgccag
      781 cccggcgcca acaccgtggc ggtggccaat accgtcaagg ccatgctgcc gaaattcctc
      841 gccgacctcg ggccgaccgc caagatcaac atcctcaacg accgctcgac ctcgatccag
      901 tcggcggtca acgacgtcga gatgacgctg gccatcacca tcggcctcgt cgtcctcgtc
      961 atcttcatgt tcctgcggcg ggtcaccgcc accctgatcc ctaccctcgc cgtgccgacc
     1021 tcgctggtgc tgaccttcgg ggccatgtac gtgctcggct tttcgatcga caacatctcg
     1081 ctgctcggcc tgacgctggc ggtcggcctc gtcgtcgacg acgccatcgt catgctcgag
     1141 aacatcgttc gccacatcga ggaaggcatg aagccgatgg aggcggcact ggccggctcg
     1201 cgcgagatcg gcttcaccat tgtctcgatc accgcctcgc tcgtcgccgt cttcctgccg
     1261 gtgctgctga tgggcggcgt cgtcggcaag atcttcaacg aattcgccat ggtggtgacc
     1321 attgccatcg tcgcttcctc gctgatttcg ctgaccttga ccccgatgct gtgcgcccgc
     1381 ctgccggcgc acaacccgtc cgccgcgcac ggcaagaagc cggtcttcga gcgcatcttc
     1441 gcctcgatca tcgccggcta tgcctggctg ctcgacctcg gcctcaaggc caagcccgtc
     1501 gtcgtgctga tcttcatcgg caccatcgtc gcttcggcgc tgatgttcga gaacatcaac
     1561 aagggctttt tgcccaacac cgacatcggc ctcgtctcga tctcgaccca ggcacgccag
     1621 gacatctcgt tcggggccat gcagaagctg caggacgcgg tcgccagcgt cgtcgccaag
     1681 gagccgttcg tcgcccacat gtcctcctcg gtgggcggtg gcttcggctc ctccagcctc
     1741 aactccggca gcatgtacgt gcagctcaag gacaagagcc tgaggccgga catggacacc
     1801 gttctgggcg ccctccgccg cgacatgggc aaggtgccag gtatttcctc ggtgccgatc
     1861 gccgtgcagg acctgcagat cggcggtcgc tcgtcgcgcg cccagtacca gtacgtggtg
     1921 cagtcggtcg acgccgacca gctgttccag tggtcgaaca agctcgaggc ggcgatggcc
     1981 gccgacacca cgcatttcgc cgacgtgtcg accgacctgc aggacaatgc gctgcaggcc
     2041 aacctcgtcg tcgaccaggc caaggcgagc ctcctcggca tcaccgccgc ccagctgcgc
     2101 aacacgcttt acgatggttt cggcgccaac caggcctcga ccatctacgg cgccggcgac
     2161 agctatgagg tgatcgtcga actcgatccg tcgatcccgt ggacgccgga gatgctcaac
     2221 cagatccagg tcaagtcggc cagcggcgcg ctggtgccgc tctcctcctt cgcccagatc
     2281 gagcgcacca acggcctgct gtcgatctcg cagcagggcc agctgccggc ggtgacgctg
     2341 tcgttcaacc tgccgcccaa cgaagcgctc ggcaccgccg tcgaccagct caccacgctg
     2401 aagcagcagc tcaacgtgcc ggcgaccatc tcgaccacct tcggcggcac cgcccaggtg
     2461 ttcgagcagg ccctcgccaa ccagggcctg ctgctcggcg ccgcggtgct gacgatctac
     2521 atcgtgctcg gcatcctcta cgagagcttc atccacccgc tgaccatcct caccgggctg
     2581 ccggccgcgg cggcgggagc gctgctgtcg ctcgagatct tccacatgga cctgagcgtc
     2641 atcgccatca tcggcatcct gatgctgatc ggcatcgtca agaagaacgc gatcatgatg
     2701 atcgacttcg ccctgcagcg aaaaaaggcc ggtgcgacgc cgctcgaggc gatccgcgaa
     2761 gcctgcctca tccgcttccg cccgatcatg atgacgacgc tcgccgccct gatgggcacc
     2821 ctgcccatcg cgctcggcac cggcgccagc gccgagctgc gccagccgct cggcgtcgca
     2881 gtggtcggcg gcctgatcgt cagccagctg ctgacgctgt tcatcacgcc ggtgattttc
     2941 ctctacatgg aagccttctc gcaggcgctc acccgtttct gggcgtccct gcgcggccgc
     3001 gggcggccga tcgaggcgcc ggcggcggtg gagattgctt cggcggccga atgatgtcga
     3061 ggctcgaggt gcccgcgtcc gctgcatccg atccgcctcc ggtggcggca acggacgtcg
     3121 ccgcgccggc gcccctggtg tggggaacgc cgctgcaacc cgcgggctcg cctctgtcgg
     3181 cacgatgcgc catcaccggc gtggacctgc gcgccggcga aggcgtgacc tttgcgagcg
     3241 tgcgcgctcc actcgccgag cgcatcaagg tcgactatcc cttcctcgac cccgccgacc
     3301 tgatcgacgc cgcgatcctc ggcatctacc gcgcccgcta tgtcgaggag gtgttgcgcc
     3361 gcgagcgtgg cggcatcacc gacatcgagc agcaggtgat cgacagcctg ggcgatcgcc
     3421 acatcgcgac gaccgacatc gagtccacaa tcacccgcga ggaccactgg accggccggc
     3481 tgttcgacac cgttgcagcg ttcggcagct catgggcgct gctgggcggc ctcgctgcgg
     3541 caggtctgct gctggtcggg gcggcgactt ctccccgctt cgggatctat ccgctggtcc
     3601 tcctgagcct ggttctcgcc gccgtggccg cactcgaaac gccgctcatc ctgatgggac
     3661 agcggcggca ggacgaacgc gatcggcggc gctcgcagaa cgtctatcgc gtcagcctcc
     3721 gggccgagct cgagctgcgg cacctgcagg aacagctcga ccatctcgcc gaagcgccgc
     3781 gcgagcggcc cccgatgccc gctgccgggt cgggtccgca cgacgagggc gaggccccgg
     3841 acacccgctc gaccgcctga ccgtcagccc agcgtgctga gcgtgccgtg gaggatactg
     3901 ccggtgcgcg cgtagtgttc gagcagccgc tcgaccgcga ggtcggcgtt gcggtcgatc
     3961 gccgcctcgg cgatcgcctc gtgctcgctc ttccagtcgc gcggcccggg cgccccggtc
     4021 gccgccacgc tgcgatagcg gttgagccgg tcgtgcagct ggtcgcagaa ctgcagcagg
     4081 gtcggcgacg ggctcgccgc cagcaggctc atgtggaaga gcttgtgcat gtgctcccac
     4141 tccggattgg agcgcgtccc ctgcccgtcg ctgacggtcc gcggcagccg ccgcagccgg
     4201 tgcgttacca gcaccagccg gtcctcccac ccctggtcgc cgcgtgcgat cgagtcgcgc
     4261 agcgcatgct cctcgagcca gcagcgagtg cgatgcagat cgtcgtattc ctcgaggctg
     4321 acccccgaga cgcgaaagcc gcgcttgtcg agccgctcca ccagcccttc cgacgtcagc
     4381 aggctgagcg cttcgcggat cggcgtcgca cccacctcga tccgctcgcg cagctgctcc
     4441 accttgagcc gctgccccgg cgccagcgcc ccggaaatga tcagcgagcg cagcttcgaa
     4501 taggcctgga tggtcagcga ctggctcgcc tcgccgtcga atgccgatga aagctcgaga
     4561 ttttgaacgg gcatgggctc cagtccgcga tgcgccc
//
LOCUS       DATAZA010000208         2843 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_254241, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000208 DATAZA010000000
VERSION     DATAZA010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2843
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254241"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..417)
                     /locus_tag="VHZ56_05265"
     CDS             complement(<1..417)
                     /locus_tag="VHZ56_05265"
                     /inference="COORDINATES: protein motif:HMM:NF019614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1697 domain-containing protein"
                     /protein_id="HEX4297411.1"
                     /translation="MTRYAAFLRGVNLGKRTVRSAELKAAFEAMGFGAVKTLLASGNV
                     LFETRPGKGLKATIEAGLKQQFGFEVGTVLRSADELEAMVAADPFKGVPESEAVKLHV
                     MLFDLARPLSVKLEGLAGDYDFPGATEREVFIYAYRK"
     gene            complement(414..1016)
                     /locus_tag="VHZ56_05270"
     CDS             complement(414..1016)
                     /locus_tag="VHZ56_05270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019859500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HEX4297412.1"
                     /translation="MAPTIVAANAVHAFKDARAFAKWLKASHATVPELWLKIARAGSG
                     IATVSYAEALDEALCWGWIDGQKKPLDAQYWLQRFVPRGKRSIWSKTNRTHTDRLLAA
                     GRMQPQGRAQIDAAKADGRWDKAYAGASSMEMPDDLLAAIEAEPAALALFGRLNGANR
                     YALAFRVHAMKTAAGRSKKIAGLVDMLKRGETPHPNGKGK"
     gene            complement(1016..1831)
                     /locus_tag="VHZ56_05275"
     CDS             complement(1016..1831)
                     /locus_tag="VHZ56_05275"
                     /inference="COORDINATES: protein motif:HMM:NF012995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylamine N-acetyltransferase"
                     /protein_id="HEX4297413.1"
                     /translation="MSEEANLDAYLKRINYAGSIAPTLETLTMLHRLHPAAIPFENLD
                     PLMERPVRLGLSDLEQKLIIERRGGYCFEHNLLFKAVLETMDFPVTPLAAGVLWGREP
                     GYVPEALMHMALLVDVGGVPYLADVGFGGQVMTGPLRLRAAEQETPNERYRLVGGDPT
                     WRLESEIGGAWRPLYQFDETPRTLDDYVAMNDLASAAFRDDLIAARVDGGRRFGLFNG
                     RFNTHENGATETRKLASVAELREVLTGVFGIALPDTDRLDVALQKALRPGAND"
     gene            complement(1888..2544)
                     /locus_tag="VHZ56_05280"
     CDS             complement(1888..2544)
                     /locus_tag="VHZ56_05280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297414.1"
                     /translation="MNTHWSGGGTACPIVEFHDVRTRAGRSAAYAGLLETRLGGAFVA
                     AGGREIGSFRVGGHPDRLMVVRGYADMAARRRALFTYHESADWARHRRTVADLTHAHE
                     TLLTRAIVPADGPGPLRSGDSWTLMVSELQFAESVGSYHLWLRLLLRKAGMDPVAAFA
                     TLEAVNDAPAVPVVRNRSHHVALLRGDGRVPELPPELRRLLRFAPEVLRLEPAAALVW
                     "
     gene            2638..>2843
                     /locus_tag="VHZ56_05285"
     CDS             2638..>2843
                     /locus_tag="VHZ56_05285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HEX4297415.1"
                     /translation="MRASRLLSIMMLLQARGRLSAETLAAELEVSVRTIYRDIDQLSA
                     AGVPVYADVGRNGGFALLDGWRTRL"
BASE COUNT          407 a         1059 c          917 g          460 t
ORIGIN      
        1 cttgcgatag gcgtagatga acacctcgcg ttcggtcgcg ccgggaaaat cgtagtcgcc
       61 ggcgaggccc tcgagcttga ccgacagcgg ccgcgccagg tcgaacagca tgacgtgcag
      121 cttgaccgcc tcgctctcgg gcacgccctt gaacgggtcg gccgcgacca ttgcctcgag
      181 ctcatcggcg gagcgcagca ccgtgccgac ctcgaatccg aactgctgct tcagccccgc
      241 ttcgatcgtc gccttcagtc ccttgcccgg ccgcgtctcg aacagcacgt tgccgctcgc
      301 cagcaatgtc ttcaccgcgc caaaccccat cgcctcgaac gccgccttga gctcggcgct
      361 ccggaccgtc cgtttgccga ggttgacccc gcgcaggaag gcggcgtagc gggtcatttg
      421 cccttgccgt tgggatgggg ggtctcgccg cgcttcagca tgtcgaccag gccggcgatc
      481 ttcttgctgc gcccggccgc ggtcttcatg gcgtggacgc ggaacgccag cgcatagcgg
      541 ttggcgccgt tgagcctgcc gaacagcgcg agcgccgccg gctcggcttc gattgccgcc
      601 aggaggtcgt ccggcatctc catgctcgag gccccggcat acgccttgtc ccaccgcccg
      661 tcggccttgg cggcatcgat ctgcgcccgc ccttgcggtt gcatgcgccc cgccgccagc
      721 agccggtcgg tgtgggtgcg gttggtcttg ctccagatcg agcgcttgcc gcgcggcacg
      781 aagcgctgca gccagtactg cgcgtcgagc ggcttcttct gcccgtcgat ccagccccag
      841 cacagcgctt cgtcgagcgc ctcggcatag ctgaccgtgg cgatgccgct gccggccctg
      901 gcgatcttca gccagagctc cggcaccgtg gcgtggctgg ccttgagcca ttttgcgaag
      961 gcccgggcat ccttgaaggc gtgcaccgca ttcgcagcga cgatcgtcgg cgccatcagt
     1021 cgttggctcc cggacgcagc gccttctgca gcgccacatc gagccggtcg gtgtcgggca
     1081 gggcgatgcc gaacaccccg gtcagcacct cgcgcagctc ggccaccgat gccagcttgc
     1141 gggtttccgt agcgccgttc tcgtgggtgt tgaatcggcc gttgaacagg ccgaagcgcc
     1201 ttccgccatc gacgcgcgcg gcgatcaggt cgtcgcggaa ggcggccgag gcgagatcgt
     1261 tcatcgccac gtaatcgtcg agcgtccgcg gcgtctcgtc gaactggtag agcggccgcc
     1321 acgcgccgcc gatctcgctc tcgagccgcc aggtcggatc gccgcccacc agccggtagc
     1381 gttcgttcgg cgtctcctgc tcggcggccc tcaaccgcag cgggccggtc atcacctgcc
     1441 cgccaaagcc cacgtccgcg aggtacggca cgccgccgac atcgaccagc agcgccatgt
     1501 gcatcagggc ctcgggcaca tagccgggct cgcgccccca cagcaccccg gcggccagcg
     1561 gcgtcaccgg aaaatccatc gtctcgagca ccgccttgaa cagcagattg tgctcgaagc
     1621 aatagccgcc gcgccgctcg atgatcagct tctgctcgag gtcgctgagg ccgagccgca
     1681 ccggccgctc catcagcgga tcgaggttct cgaacggaat cgccgccgga tgcagccggt
     1741 gcagcatcgt cagcgtctca agggtcggcg cgatcgaccc cgcgtagttg attcgcttga
     1801 gataggcgtc gagattggcc tcttcgctca ccgcacatcc ctgccgccgt ttcgggaccg
     1861 gcataatgct gaacccggcc gtctttgtca ccacaccagc gccgccgccg gttcgagccg
     1921 cagcacctcc ggggcgaatc gcagcaggcg gcgcagctcc ggcggcagct cgggcaccct
     1981 gccgtcgccg cgcagcagcg cgacgtgatg gctgcgattg cgcaccaccg gcaccgccgg
     2041 tgcgtcgttg accgcttcca gcgtcgcgaa cgccgcgacc gggtccatcc cggccttgcg
     2101 cagcagcagc cgcagccaga ggtggtagct gccgacgctc tcggcgaact gcagctccga
     2161 caccatgagg gtccagctgt cgccgctgcg cagcggtccc ggcccgtcgg cgggcacgat
     2221 ggcgcgcgtc agcagggtct cgtgggcgtg cgtcaggtcg gcgaccgtgc gccggtgccg
     2281 ggcccagtcg gcgctctcgt ggtaggtgaa gagggcccgc cgccgcgccg ccatgtcggc
     2341 gtagccgcgc accaccatca gccggtccgg atggccgccg acccggaagc tgccgatctc
     2401 ccgcccgccc gccgccacga acgccccgcc gagccgcgtc tccagcagcc ccgcataggc
     2461 cgccgaccgg ccggccctgg tccgaacatc gtgaaattcg acaatcgggc aggccgtgcc
     2521 gccgccgctc caatgggtgt tcatcgcctc tctccgcggc tcttcctgag ccatgcggaa
     2581 gagtgtacga ctcgatgcct gacacctgat gtcagccttt atccgagtcc cgcaaaaatg
     2641 cgcgccagcc gcctcctgtc gatcatgatg ctgctgcagg cgcgcggccg gctgagcgcc
     2701 gaaaccctgg ccgccgaact cgaggtttcg gtgcgcacca tctaccgcga catcgaccag
     2761 ctgagcgccg ccggcgtccc cgtctatgcc gatgtcggcc gcaatggcgg cttcgcgctg
     2821 ctcgacggct ggcgcacccg gct
//
LOCUS       DATAZA010000209        13054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2924609, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000209 DATAZA010000000
VERSION     DATAZA010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 13054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13054
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2924609"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..935)
                     /locus_tag="VHZ56_05290"
     CDS             complement(<1..935)
                     /locus_tag="VHZ56_05290"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX4297416.1"
                     /translation="MKRGIYLLIGVAVFAVLAVFLYPRLSGNQIGTADAQQTASGNAS
                     SASAPKGSGDAGRTRGAGATSVVVAVAAQQSLPITSTELGYVVAPNVAVLRTRADGVV
                     LQQDVVEGQMVKAGDVLFKLDDRAAQAVVAKDQATIAKDQANFDESQKDLARDNQLAK
                     NDAGTQQAADTQAALVKADQAQLQADQATLQGDQLTVGYMTITAPIDGRVGQINTSVG
                     NVVRAADTSAGGLLTITQMSKLRVSYSVAESDLDQYRQALANKLPVSILAQGDTAPRA
                     TGTLSFIDSSVDQASGTVATEADVTGGADKLWPGQ"
     gene            1269..3017
                     /locus_tag="VHZ56_05295"
     CDS             1269..3017
                     /locus_tag="VHZ56_05295"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX4297417.1"
                     /translation="MATSLADAIAEVDGLRGRGDLLLAFDRAGDHLKTWPDSEALRHR
                     ALLALARAGATEQAARLFAAWKLDGSADPEVLALAARLAKDRALKLRDGSRDAALRAA
                     AELYRRLDARAPGYYPAINAASLTALAGDRQGAARLARAVLEDPAVVAGADYWALVTR
                     AEAELLCGRRAAASTALAAAAALSPPPSDMASTRRQLRLILAQDGATTAESQAVLAPL
                     AAPWTLHYLSSAAAPGNWPAPDGEGVAAMAAQIAAVLASRPPGSVFGSLGTAAELLFA
                     EAALAAGAQLDLVLPVPAAHLRDLVATSGGEQWAVRFDRCVDRAQRVVLASDDPDVGD
                     FGHLAYAVRVAMGLTLLRAQHIDGPALQVLLDEAASDTGAALGEEWTAGGRQRVTLRV
                     GQPADVPGIPVLPPRLTRAVVFGDLPGFSQLREDQLPVFMDQVMRAVGSVIDEGGPHV
                     ELRNTWGDAIHLVLDDVRAAARICLGVQDALARVDGRLLAREAPPVMRIGAHYGPVFS
                     GWDAVVHQTTYYGRALTKAARIEPITLPGAVYVSEAFAAILLLETGQEFTCTYVGVVP
                     LAKGFGEFRMYDLAVS"
     gene            complement(3014..3799)
                     /locus_tag="VHZ56_05300"
     CDS             complement(3014..3799)
                     /locus_tag="VHZ56_05300"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEX4297418.1"
                     /translation="MEQDLQGILARALAVPVSALAAGRLGPVTVAVIDSGIDATHPDL
                     AGRVAESLAVTADPDGHTTITPTDPAANNDTYGHATAVASIIGRIAPNTRFIDIRVLG
                     SNNHGSADALLAGIDHANYGPAGLMNISVAVGEAYVPRLMPLTDMAYRRGKIIVAATR
                     NAPLEDEGYPASIVPCIGVGNARQGPEDQWRYQRDVIEFLAHGVDVPIAVAGGGYSTQ
                     TGTSFATPIVTGIVALMLGAHPGLTPFEVKALLKAFAAEIRMR"
     gene            complement(3802..4464)
                     /locus_tag="VHZ56_05305"
     CDS             complement(3802..4464)
                     /locus_tag="VHZ56_05305"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEX4297419.1"
                     /translation="MAEPSSVQADLMRRYLGVRPHTSEDQVLRLTIEAGVRAVGGDEG
                     SLLVFDPETQDLTFVMTYGNAASEASLIGQHVPVGRSLIGLAAETGQVQIGAPRYRDA
                     ARTEALEGVRAVLAAPMRVNERLIGVITAISNRDDKRFTMDDAELYACLATIAALVVE
                     QSQRLRALTDGAPADAAAALAGTPLEQQVLARVGRLLQRDTNTVRQLARMLEAMEGFT
                     PV"
     gene            complement(4457..6439)
                     /locus_tag="VHZ56_05310"
     CDS             complement(4457..6439)
                     /locus_tag="VHZ56_05310"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4297420.1"
                     /translation="MTAPAAANRRFSFGRLIGWALAATSGIAGPFILVTVLAILTTLL
                     SQYNAQLITNFTGMLQGGPAHGPTSGFNLVALLLPADVGWTAILFAVTAILLIGFGFA
                     NRVGSTWYNTLMQQRLQLRLHNKLLEMGPGYHADHDMGENTALVMQYPAMAQPMLRDV
                     LAFPFVRGVALISAAVLLYYNLRGLGSQDVVYVMLAVLLVLLPAGGVWLSSRLRGVYG
                     SVRDRQNALNNVLVDSLTAPQEVQLMDAGAQRAAAFDAELTILRRAQVRASVQRETSG
                     QYLTAVPVVLQVGLILWAVFVAGGAAVPAVIAIYFFVPRVVDPIRELIEFYANLNTAW
                     PNIERIGDVLEAPPEVADTGKRGAADLRSHEVGLDAIVFRPADRTVLDGISKRFTPGR
                     ITAIVGRSGSGKSTIMRLVSRLFDPTGGRITIGGIDIRELELKALREVTATVSQFPLF
                     IEAGVRENLRLGAPAATDAQMEEACRAADLWDALVRISPADPLATPVPRQAGKAGLAG
                     GERRRLAIARTLLSDARILLLDEPSTGIDALSITRILHQFRSQPDRTILLVDHDMDLI
                     SAVADEICCIEDGKFTDIGTPAELLARPTLFKSLWDARRSYGTDNLEVTGSVPVRPAQ
                     VPAGQAAATAARPAAASPARDGGRPMQSAVQGVPNG"
     gene            complement(6436..7191)
                     /locus_tag="VHZ56_05315"
     CDS             complement(6436..7191)
                     /locus_tag="VHZ56_05315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297421.1"
                     /translation="MSTSVASAADALVAARAKFGAAQALPARLGLVDALLGLAGAQLS
                     SGDPAAAELVLGDIREHLEHGVRTDPDWQLRASAASRLSIAIAQLLGRHDEAVAQLDT
                     NLRSVSGTGPEADAARLSLLTARLQSHLALGQATRAGETLAAARQVVARMTRTIPARP
                     ASVLAATLLLQQASVAMLRNAPAEAEAAFAEALALVDRLGGSDLGELRRRIIRSWTSA
                     LKAQGRTAEATALVGRTLLATPAGGAPPGPFAP"
     gene            complement(7315..7545)
                     /locus_tag="VHZ56_05320"
     CDS             complement(7315..7545)
                     /locus_tag="VHZ56_05320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297422.1"
                     /translation="MAEITVKIGKKGDESKVDKSKITKGSKPKQMGGAEGQYAYVTAV
                     TCWNCYAVNEITADTNFQVGFYCWNCGAYCVY"
     gene            7974..9077
                     /locus_tag="VHZ56_05325"
     CDS             7974..9077
                     /locus_tag="VHZ56_05325"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4297423.1"
                     /translation="MARLRVGLVGAGLVGQAEHAFYLWEERGLFEFAGLADASDTVRQ
                     AVGARYGVPVLSPDLGGLLGAGLDALVIAAPDPFHPELAVAALGAGLHVMCEKPLALT
                     LAGCDAIAAARDKAGKVMQVAYMKRYDPSFRRALDFLPSRVEDIKLISVEVNDPDQAP
                     FVAHLPMTVPDDIPAALRDDFRAKNSAQLREAAGREPSAEGARALSGGFLSSLVHDVA
                     VVHGMLDHMGVEFPAQASHGAIFDEGRGVQLAAGLPGGGRISMTHVNLPGVPDYTERI
                     AVYCTDRIVELVFPSPYLKHLPTRLRVLTPGKGAPHELVTAEYRSSYEEAFRDELRAF
                     HAAATGQAPVQTTVEGARRDVEFLISAYRKAVA"
     gene            9074..10033
                     /locus_tag="VHZ56_05330"
     CDS             9074..10033
                     /locus_tag="VHZ56_05330"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEX4297424.1"
                     /translation="MRVGVYSDSLPKLSRRELFRWCAERGVKDIELGVGAWGPWPRPH
                     LDIATVGEAAERDRLRGELKEFGIRLAAVNAAGNLLHPDPAKRADAQQRFRAAVDLAK
                     ALGVKRVITMSGCPAGPNGGGLSVFPCWATSADDERIFDWQMSEVVGPYWRETSAWLA
                     REAPEIMVCLELHPGVTVFSAAGFERLLPYVGMNVGLNMDPSHFWWQGIDPVTVVEDF
                     GDRIGYAHGKDTLLYPDRIRRQGVLHFSPPADPGKAPWHFVSVGEGHDDATWTTLIAA
                     LQKAGYDDVVSIEHEDPRYDGEEGTRRSLEGLKRAIAPLEAKG"
     gene            10030..10971
                     /locus_tag="VHZ56_05335"
     CDS             10030..10971
                     /locus_tag="VHZ56_05335"
                     /inference="COORDINATES: protein motif:HMM:NF012742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000976 - transcription cis-regulatory
                     region binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX4297425.1"
                     /translation="MTTLIDVARRAGVSKSTVSNVIRGDVRVAKATKARVERAIADIQ
                     YHPNAIARSLKARSSTAIGIVVPDLTNSFYAELAAGAERAASALGYAALITHTECSAP
                     TEEEAARAFIERRVDGVIVGGVSVGSTLPSLLLDRDIPVVVASFGESDDPRLGVIDHD
                     DPTAMESVVAHLYELGHRRLAFVSHHLREQSGERRRLGFENALKRRGLVDVGLGDGAT
                     AVAAHNDMLAIATIDRLERQGLRVPEDVSVVGYDDIPLAAHRRIKLTTVHSDAVEMGR
                     RAVELLLGAAREGRHVAHREIQSGRLVIRATTMRPPA"
     gene            10968..12065
                     /locus_tag="VHZ56_05340"
     CDS             10968..12065
                     /locus_tag="VHZ56_05340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4297426.1"
                     /translation="MSSVRYEAVEKRFGALTVLRALSLDVPDHAFLALLGPSGCGKTT
                     ALRLLAGLDLPSAGRVLIGERNVTRLQPRDRDVAMVFQSYALYPQMTVLQNIAYPLRI
                     RKIGADEQARRVSEVAQALEIDHLLERRPRALSGGQRQRVALARAIVREPAAFLMDEP
                     LSNLDARLRLTMRGEIKRLCQRLGATTLYVTHDQAEALTMADLIAVMKDGELQQIAPP
                     AEIYDRPANRFVATFVGSPAMSVLPAGLDDAGLHVGDALLHLDAGRQQDCRAMAAEAI
                     GIRPEDVSLADPGTPGAIGAEVYVVEPMGNETLVDVRVKGERLTLRARRGFTAPIGST
                     VGVTFDPANACFFDKAGNTVVHRAPNKGDRS"
     gene            12062..>13054
                     /locus_tag="VHZ56_05345"
     CDS             12062..>13054
                     /locus_tag="VHZ56_05345"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX4297427.1"
                     /translation="MTDNNPFGRPIRRRTLLQGSAGLAIAAALGGTATAPARAADAKK
                     VIIGAFADGGLTPFKEKIIPLAKSQGFDITFLEDEYGVTLEKWFADAQNGAGQYDLYL
                     LDDPWVPQFGAANVLEDLGAGGIDGTSSDWIGPLIDMGYWPPRVGPRVKGFETATPTL
                     VTVPFVGDLQTLTYRNDVFTNGAPQTWDDVITMGKAGVAAGTIKYPVVFRGVTGNPIV
                     TSWYPVFLSFGGEFFDDKWNVTFNNDKGKAAAEFFVGTMKQNAPPGVVEFDSDQEGAA
                     ILGGDAGAIIQYSGNAIKSDDPTQTKVPGKLDFGVVPKQEKAIAQLGIFIAGVPK"
BASE COUNT         1903 a         4261 c         4857 g         2033 t
ORIGIN      
        1 tactggccgg gccagagctt gtcggcgccg ccggtaacgt cggcttcggt cgccacggtg
       61 ccggaggcct ggtcgaccga ggagtcgatg aacgacaggg tgccggtggc gcgcggcgcg
      121 gtgtcgccct gggcgaggat gctgaccggc agcttgttgg cgagcgcctg ccggtactgg
      181 tcgaggtcgc tctcggcgac cgagtagctg accctcagct tcgacatctg ggtgatggtg
      241 aggaggccgc cggccgaggt gtcggcggcg cgcacgacgt tgccgaccga ggtgttgatc
      301 tggccgacgc ggccgtcgat cggggcggtg atcgtcatgt agccgaccgt cagctggtcg
      361 ccctgcagcg tcgcctggtc ggcctgcagc tgggcctggt cggccttgac cagcgccgcc
      421 tgggtatcgg cggcctgctg cgttccggcg tcgttcttgg cgagctggtt gtcgcgggcg
      481 aggtccttct gggactcgtc gaaattggcc tggtccttgg cgatcgtcgc ctggtccttg
      541 gccaccaccg cctgcgcggc gcggtcgtcg agcttgaaca gtacgtcgcc ggccttgacc
      601 atctggcctt cgaccacgtc ctgctggagc accacgccgt cggcgcgggt gcgcagcacg
      661 gcgacgttcg gcgcgacgac gtagccgagc tcggtgctgg tgatcggcag cgattgctgc
      721 gccgcgaccg cgacgacgac ggaggtagct ccggcgccac gcgtccggcc ggcatcgccg
      781 gaacccttgg gggcagaggc gctggaggca ttgccggaag ccgtctgctg ggcgtcggcg
      841 gtgccgatct ggttgccgct caggcgggga tagagaaaaa cggcaaggac ggcgaagacc
      901 gcgaccccga tcagcaggta gatcccgcgc ttcatatacg tccccttgca ccgccaattg
      961 gcgacgcacc taacgcgaga gggctttgcg ctgacctttt ccgcgtctta catttcggta
     1021 atgccggaaa ggttggttga cgttgccgtg aacggtgcgg aggcaatggt ggtgaagcgg
     1081 gccgaaatgc tggtgacgcc gccccgcgct tcgtgatcgg gcgcgctgcg gcaggacgcc
     1141 gcagacgcgg ctgttcaagc gcttcggcgg cagcgcacgc gagacgcggc gaacttgtga
     1201 tgcggggcag ccgccgtcta tcttcgcctg ggacgggcgc cggggcggcg cgccgggggt
     1261 gccggaccgt ggcgacatcg cttgccgacg cgatcgcaga agtggatggg ttgaggggcc
     1321 gcggtgatct gctgctcgcg ttcgatcggg ccggcgacca tctcaagacc tggccggact
     1381 cggaggcgct gcggcatcgg gcgttgctgg cgctggcgcg cgcaggcgca acggagcagg
     1441 cggcgcgact gttcgcggcc tggaagctcg acggctcggc cgatccggag gtgctggcgc
     1501 tggcggcgcg gctcgccaag gaccgtgcac tgaagcttcg ggacgggagc cgggacgccg
     1561 ccctgcgagc cgcggcggaa ctctatcgcc gcctcgacgc gcgcgccccc ggctactatc
     1621 cggccatcaa tgccgccagc ctgacggcgc tcgccggcga tcggcaggga gcggcacgac
     1681 tggcccgtgc agtgctcgag gatccggcgg tcgtcgccgg ggcggattac tgggcgctgg
     1741 tgacgcgtgc cgaggccgaa ctgctgtgcg ggcggcgcgc cgcggcgtcg acggcgcttg
     1801 cggccgctgc ggcactgtcg ccaccgccga gcgacatggc gtcgacccgg cggcaactgc
     1861 gattgatcct ggcgcaggac ggggcgacca cggccgagag ccaggcagtt ctggcgccgt
     1921 tggcggcgcc gtggacgctc cactacctca gcagcgccgc cgcgccgggc aactggccgg
     1981 cgcccgacgg cgaaggcgtc gccgcgatgg cggcgcagat cgccgcggtg ctggcgtcac
     2041 ggccgcccgg ctcggtgttc ggttcgcttg gaacagcggc ggagctgttg ttcgccgagg
     2101 cggcgctggc ggccggagcg cagctcgacc tggtgctgcc ggtcccggcg gcgcacctgc
     2161 gggacctggt cgcgacatcc ggcggcgagc aatgggcagt gcggttcgac cgttgcgttg
     2221 accgcgcaca gcgggtggtg ctggcgtcgg acgatccgga cgttggggat ttcggccacc
     2281 ttgcctatgc ggttcgcgtc gcgatggggc tcaccctgct gcgggcgcag catatcgatg
     2341 gcccggcgct gcaggtgctg ctcgacgagg cggcgtccga taccggggcg gcactgggtg
     2401 aggaatggac ggccggcgga cggcagcgcg tcacgctgcg ggtcgggcag cccgccgatg
     2461 ttcccggcat tccggtcctt ccgccgcggc tgacgcgcgc ggtggtgttc ggcgacctcc
     2521 cggggttttc gcagctccgg gaagaccagc tgccggtgtt catggaccag gtgatgcggg
     2581 cggtcggatc ggtgatcgac gagggcggtc cgcatgtcga gctgcgcaac acctggggcg
     2641 atgccatcca cctggtgctc gacgacgtgc gggcggcggc ccggatctgc ctcggcgtac
     2701 aggatgcgct ggcgcgcgtc gacggccggc tgctggcgcg cgaggcgccg ccggtgatgc
     2761 gcatcggcgc gcattacgga ccggtgttca gcggctggga tgccgtggtg caccagacga
     2821 cgtattatgg gcgggcgctg accaaggcgg cgcggatcga gccgatcacg ctgccgggtg
     2881 cggtctacgt gtccgaggcg tttgcggcga tcctgctgct cgaaacgggg caggagttca
     2941 cctgcaccta tgtcggcgtg gtgccgctcg ccaagggttt tggcgagttc cggatgtacg
     3001 atctggccgt gagctagcgc atccggattt cggcggcgaa ggccttcagc agcgccttca
     3061 cctcgaacgg agtgaggccg gggtgcgcgc cgagcatgag cgcgacgatg ccggtgacga
     3121 tcggcgtggc gaagctggtg ccggtctggg tgctgtagcc gcccccggcg accgcgatcg
     3181 gcacgtcgac gccatgcgcc aggaactcga tcacgtcgcg ctggtagcgc cactggtctt
     3241 ccggtccctg ccgggcgttg cccacgccga tgcaagggac gatcgaggcg gggtagcctt
     3301 cgtcctcgag cggggcgttg cgggtcgcgg cgacgatgat cttgccgcgc cggtaggcca
     3361 tgtcggtcag cggcatcagg cgaggaacgt aggcttcgcc gacggcgacc gagatgttca
     3421 tgagcccggc cggcccgtaa ttggcgtggt cgatgccggc cagcagcgcg tcggccgaac
     3481 cgtggttgtt gctgccgagc acgcggatgt cgatgaagcg ggtgttgggg gcgatgcgcc
     3541 cgatgatgct ggcgacggcg gtggcatggc cgtaggtgtc attgttggct gccggatcgg
     3601 tgggggtgat ggtggtgtgg ccgtcgggat cggcggtgac ggccaggctc tcggcgacgc
     3661 gtccggcaag gtcgggatgg gtcgcatcga tgccgctgtc gatgactgcc acggtcaccg
     3721 gaccgagccg gccggcggcc agcgcggaga ccggtacggc cagcgcccgg gcgaggatgc
     3781 cttgcaggtc ctgttccacg atcagaccgg ggtgaagcct tccatcgcct cgagcatgcg
     3841 ggcgagctgg cgaacggtgt tggtgtcgcg ctgcagcagc cttccgacgc gggcgaggac
     3901 ctgctgttcg agcggcgtgc cggccagcgc cgcggcggca tcggccgggg cgccgtcggt
     3961 caaggcgcgc agccgttgcg attgctcgac caccagtgcg gcgatcgtcg ccaggcaggc
     4021 gtagagttcg gcgtcgtcca tggtgaaccg cttgtcgtcg cgattggata tggcggtgat
     4081 gacgccgatc agccgttcgt tgacgcgcat cggtgcggcg agcacggcgc ggacaccctc
     4141 gagcgcctcg gtgcgggccg catcgcggta gcgcggggcg ccgatctgca cctggccggt
     4201 ctcggcggcg aggccgatca ggctgcggcc gaccgggacg tgctggccga tcagcgacgc
     4261 ctcggacgca gcgttgccgt aggtcatcac gaaggtcagg tcctgcgtct ccggatcgaa
     4321 gaccagcagc gaaccctcgt cgccaccgac ggcacggacg ccggcctcga tcgtgaggcg
     4381 cagcacctgg tcctcgctgg tgtgcgggcg gacgccgaga tagcgccgca tgaggtcagc
     4441 ctgcaccgat gatggctcag ccattgggga ctccttgcac tgcggactgc atggggcggc
     4501 cgccgtcgcg cgccggggag gcggctgccg gtcgggcagc ggtggccgcg gcctggccgg
     4561 ccgggacctg cgccggtcga accgggacgc tgccggtcac ctcgaggttg tcggtgccgt
     4621 agctgcgccg ggcgtcccag aggctcttga acaaggtcgg ccgcgccagc agctccgccg
     4681 gagtgccgat gtcggtgaac ttgccgtctt cgatgcagca gatttcgtcg gccaccgccg
     4741 agatcagatc catgtcgtgg tcgacgagca ggatggtgcg gtccggctgg ctgcggaact
     4801 ggtggaggat gcgggtgatc gagagcgcat cgatgccggt cgagggctcg tcgagcaaga
     4861 ggatgcgggc gtccgagagc agcgtgcggg cgatggcgag ccgccgccgc tcgcccccgg
     4921 cgagcccggc cttgccggcc tggcgcggga ccggcgtggc cagcggatcg gcgggcgaga
     4981 tgcgcaccag cgcgtcccag agatcggccg cacgacaggc ctcttccatc tgcgcatcgg
     5041 tggccgcggg cgcgccgagg cgcaggttct cgcgcacccc ggcctcgatg aagagcggga
     5101 actgcgaaac ggtcgcggtg acttcgcgca aggccttgag ctcgagctcg cggatgtcga
     5161 tgccgccgat ggtgatccgc ccgccggtcg ggtcgaacag ccgggagacg agccgcatga
     5221 tggtgctctt gccggagccg gagcggccga cgatggcggt gatccggccg ggggtgaagc
     5281 gcttgctgat accgtcgagc acggtgcggt cggcgggacg gaagacgatg gcgtcgaggc
     5341 cgacctcgtg gctgcgcaga tcggcggcgc cgcgcttgcc ggtgtcggcg acttccggcg
     5401 gggcttccag cacgtcgccg atgcgctcga tgttgggcca ggcggtgttg aggttggcgt
     5461 agaactcgat cagctcgcgg atcggatcga cgacgcgggg cacgaagaaa tagatggcga
     5521 tgactgccgg caccgccgca ccgccggcga cgaacacggc ccagaggatc aggcccacct
     5581 ggaggacgac cggcaccgcc gtgagatact ggccggaggt ctcgcgctgc acggaggcgc
     5641 ggacctgcgc ccggcgcagg atggtgagtt cggcgtcaaa ggccgcggcg cgctgggcgc
     5701 cggcgtccat cagctggact tcctgcggcg cggtgaggga gtcgacgagc acgttgttga
     5761 gggcgttctg ccggtcacgc acgctgccat agacgccgcg cagccggctc gacagccaga
     5821 cgccgccggc gggcaggagc acgagcagca cggccagcat gacgtagacg acgtcctgcg
     5881 agccgaggcc gcgcaggttg taatacagca gcacggcggc cgagatcagc gccacgccgc
     5941 gcacgaaggg gaaggccagc acgtcgcgca gcatcggctg ggccatcgcc gggtactgca
     6001 tgaccagcgc ggtgttctcg cccatgtcgt ggtcggcgtg gtagcccggc cccatctcga
     6061 gcagcttgtt gtgcagcctg agctgcaggc gctgctgcat cagcgtgttg taccaggtcg
     6121 agccgacgcg gttggcaaag ccgaagccga tgagcaggat ggcggtgacg gcaaacagaa
     6181 tggcggtcca gccgacgtcg gcagggagca gcagggcgac gaggttgaag ccggaggtgg
     6241 ggccgtgcgc cggtccgccc tgcagcatgc cggtgaaatt ggtgatgagc tgggcgttgt
     6301 actggctcag cagcgtggtg aggatcgcca gcacggtgac gaggatgaac gggccggcga
     6361 taccgctggt cgccgccagt gcccagccga tcaggcgccc gaatgagaag cggcggttgg
     6421 cggcagccgg cgccgtcacg gcgcgaacgg gccgggcggg gcgccgccgg cgggcgtggc
     6481 gagcagcgtg cgtccgacga gggcggtcgc ctcggccgtc cggccctgcg ccttgagcgc
     6541 gctcgtccag ctgcggatga tgcggcggcg cagttcaccc aggtcgctgc cgccgaggcg
     6601 gtcgaccaaa gcgagggcct cggcgaaggc cgcctccgct tcggccgggg cgttgcgcag
     6661 catggcgacc gaggcttgct gcagcagcag tgtggcggca agcaccgatg ccgggcgcgc
     6721 cggaatggtc ctggtcatcc gcgccacgac ctgccgggcg gcggccagcg tctcgccggc
     6781 gcgggtggcc tggcccagcg ccagatgcga ttgcaggcgg gcggtgagca gcgacaggcg
     6841 ggcggcgtcg gcttcggggc cggttccgga gacggagcgc agattggtgt cgagctgcgc
     6901 cacggcttcg tcgtgacgcc cgagcaattg cgcgatggcg atcgacaggc gcgaagcggc
     6961 gctcgcccgc aattgccagt cgggatcggt ccgcacccca tgttcgagat gttcgcgaat
     7021 atcgccgagg acgagttcgg cagcggcggg atcgccgctc gacagctgtg cgccggccag
     7081 gcccaggagg gcgtcgacaa gcccgaggcg ggccggcagc gcctgggccg caccgaactt
     7141 ggcgcgggcc gcaaccaggg cgtcggcggc gctcgccaca gatgtcgaca tgctgcccgc
     7201 ctccagggaa cgcgcttgtg ccggcgccga tcggcgccgg cccctttgtc ccgccgggct
     7261 ccggcggttg tgccaggcgg cgggccgacc cggcccgccg gccccagccg gtcctcagta
     7321 gacgcagtag gcgccgcagt tccagcagta gaagccgacc tggaagttgg tgtccgcggt
     7381 gatctcgttg accgcgtagc agttccagca ggtcacggcg gtgacgtagg cgtactggcc
     7441 ctcggcaccg cccatctgct tgggtttgga gcccttggtg atcttcgact tgtcgacttt
     7501 tgactcgtcg cccttcttgc cgatctttac ggtaatctct gccattctct ctctccgtgt
     7561 gatgtgggtt ctgagcagaa ccaactgggt tgccgcccgg tgtgttcgac ccgccggcgc
     7621 atcgacttgc agatcagagt gacgcgaccc ttcccccaag attttcctaa gcccacgttc
     7681 ggatcatttc tcacaaatgc caaaaacgca agcaacgtca gcggcctgaa cgtatgcgaa
     7741 cagcaactcg gtggtcgctc cgccggatca gccgaaggct gcggcgctgc tccatcaagc
     7801 atcacttggt tcgacgccag ccgttccttc cggcttgggt ggagttgcag aaataatcgc
     7861 cggagggtgt ctcccgcgct ccacgtcccg tcctccggcg cttgccagtt gacgccgccg
     7921 cgcggccagt attgattggg cgctggaacg ttccaatacg cgtgggggag cttatggcgc
     7981 ggttgcgggt cggtttggtc ggagcagggc tcgtgggcca ggccgaacat gccttctacc
     8041 tgtgggaaga gcgcgggctg ttcgaattcg ccgggctcgc cgacgcgtcc gacaccgtgc
     8101 gccaggctgt gggggcccgt tacggcgtgc cggtgctgag cccggatctt gggggcctcc
     8161 tcggcgccgg gctcgacgcc ctggtgattg cggcgcccga cccgttccat cccgagctgg
     8221 cggttgcggc gctcggggcc gggctgcacg tgatgtgcga gaagccgctg gcgctgacgc
     8281 tcgccgggtg cgacgcgatt gcggccgccc gcgacaaggc cggcaaggtg atgcaggtcg
     8341 cctacatgaa gcgctacgac ccgtcgttcc ggcgggcgct cgacttcctg ccgtcgcgcg
     8401 tcgaggacat caagctgatc tcggtcgagg tcaacgatcc cgaccaggcg ccgttcgttg
     8461 cccacctgcc gatgaccgtg cccgacgaca ttccggcggc gctgcgcgac gatttccggg
     8521 ccaagaacag cgcccagctg cgcgaggcgg cgggccgcga gccttcggcc gaaggggcgc
     8581 gggcgttgag cggcggcttc ctgtcgtcgc tggtccacga cgtggcggtg gtgcacggca
     8641 tgctcgacca tatgggcgtc gagtttccgg cacaggccag ccatggggca atcttcgacg
     8701 aagggcgcgg cgtgcagctc gcggccgggc tgccgggtgg cggccggatc agcatgacgc
     8761 acgtcaacct gccgggggtg ccggattata ccgagcggat cgcggtctat tgcaccgacc
     8821 gcatcgtcga gctcgtcttt ccctcgccgt acctgaagca tttgccaacg cggctgcgcg
     8881 tcctgactcc tggcaagggt gcgccgcacg agctggtgac ggcggaatat cgttccagct
     8941 acgaagaggc gttccgcgac gagctgcgcg cattccatgc cgcggcgacc gggcaggccc
     9001 cggtgcagac tacggtcgaa ggcgcgcgcc gcgacgtcga gttcctgatc tccgcctacc
     9061 ggaaggccgt cgcatgagag ttggcgtcta ttccgattcg ctgcccaagc tcagccgccg
     9121 cgagctgttt cgctggtgtg cggagcgcgg cgtcaaggat atcgagctcg gcgtcggcgc
     9181 ctgggggccg tggccccggc cgcatctcga catcgcgacc gtcggcgagg cggcggaacg
     9241 cgaccggctg cgcggcgagc tgaaagaatt tggcatccgg ctcgcggcgg tcaacgccgc
     9301 cgggaacctg ctgcaccccg atccggccaa gcgcgccgat gcgcagcagc ggttccgggc
     9361 agcggtcgat ctcgccaagg ccctcggcgt caagcgtgtc atcaccatga gcggctgccc
     9421 ggcgggtccg aacggcggcg gcctcagcgt ctttccgtgc tgggcgacct cggcggacga
     9481 cgagcgcatc ttcgactggc agatgtccga agtggtgggg ccatactggc gcgagaccag
     9541 cgcgtggctc gcccgggaag cgccggagat catggtctgc ctcgagctgc atccgggcgt
     9601 gacggtgttc tcggccgccg gcttcgagcg gctgctgccg tatgtcggga tgaatgtcgg
     9661 gctcaacatg gaccccagcc atttctggtg gcaggggatc gatccggtca ccgtggtcga
     9721 ggatttcggc gaccgcatcg gctacgccca cggcaaggac acgctcctct atcccgaccg
     9781 catccgccgg cagggcgtgc tgcatttttc gccgccggcc gacccgggca aggcgccctg
     9841 gcacttcgtg tcggtgggcg aggggcatga cgatgccacc tggacgacgc tcatcgcggc
     9901 gctgcagaag gccggctacg acgacgtcgt ctcgatcgag cacgaggatc cgcgctacga
     9961 cggcgaggag ggcacccgcc gttcgctcga gggcctgaag cgcgccatcg cgccgctgga
    10021 ggcgaaagga tgaccacgct gatcgacgtc gcccggcgtg ccggcgtttc gaagtcgaca
    10081 gtctccaacg tcatccgcgg cgatgttcgt gtcgccaagg ccaccaaggc ccgcgtcgag
    10141 cgggccatcg ccgatatcca gtaccatccc aacgccatcg cccgctcgct caaggcgcgc
    10201 tccagcacgg cgatcggcat cgtcgttccc gacctcacca actcgttcta tgcggaactg
    10261 gccgccggcg ccgagcgcgc tgccagcgca ttgggctacg cggcgctcat cacccacacc
    10321 gaatgctcgg ccccgaccga ggaggaggcg gcgcgcgcct tcatcgagcg ccgcgtcgac
    10381 ggggtgatcg tcggcggcgt atcggtcggc tcgacgctgc cgagcctctt gctcgaccgc
    10441 gatattccgg tggtcgttgc ctcattcggg gaatccgacg atccgcgcct gggagtgatc
    10501 gaccacgacg acccgacggc gatggagagc gtggtcgcac acctctacga gttggggcac
    10561 cggcgacttg ccttcgtgtc gcaccatctg cgcgaacagt ccggcgagcg ccgccggctc
    10621 ggcttcgaga acgcgctgaa gcggcgcggg ctggtcgatg tcgggctcgg cgacggcgcg
    10681 accgcggtgg cggcgcacaa cgacatgctg gcgatcgcca ccatcgaccg gctcgagcgg
    10741 caggggctgc gggtgccgga ggatgtgtcg gtggtgggct acgacgacat tccgctggcc
    10801 gcacaccggc gcatcaagct gaccaccgtg cactccgatg ccgtcgagat ggggcggcgg
    10861 gcggtcgagc tgctgctcgg cgcggcgcgc gagggccggc acgtcgcgca tcgcgagatc
    10921 cagagcggcc ggctggtcat ccgcgccacg acgatgcggc cccccgcatg agctcggtgc
    10981 gctacgaagc ggtggaaaag cggttcggcg cgctgacggt gctccgggcg ctgagcctcg
    11041 acgtgccgga tcacgccttc ctggcgctgc tcgggccctc gggctgcggc aagaccacgg
    11101 ccttgcggct gctcgccggg ctcgacctgc caagcgccgg gcgggtgctg atcggcgagc
    11161 gcaacgtcac ccggctgcag ccgcgcgacc gcgatgttgc aatggtgttc cagtcgtacg
    11221 cgctctaccc gcagatgacg gtgctgcaga acatcgccta tccgctgcgc atccggaaga
    11281 tcggcgccga cgagcaggcc cggcgggtgt cggaagtggc gcaggcgctc gagatcgacc
    11341 acctgctgga acggcggccg cgggcgctgt cgggcggcca gcggcagcgc gtggcgctgg
    11401 cccgcgccat cgtgcgcgaa ccggctgcgt tcctcatgga cgagccgctg agcaatctcg
    11461 atgcgcgcct gcggctcacc atgcgcggcg agatcaagcg gctgtgccag cggctcggtg
    11521 cgacgacgct ctacgtcacc catgaccagg ccgaggcgct gaccatggcc gacctgatcg
    11581 cggtgatgaa agacggcgag ttgcagcaga tcgcgccgcc ggccgaaatc tacgaccggc
    11641 cggccaatcg gttcgtcgcg accttcgtgg gcagccccgc catgagcgtg ctgccggccg
    11701 gactcgacga tgccggcctg catgtcggcg acgcgctgct gcacctcgat gccggacggc
    11761 agcaggattg tcgcgccatg gcagccgagg cgatcggcat ccggccggag gacgtgagcc
    11821 ttgccgaccc gggcaccccc ggcgccatcg gcgccgaggt ctatgtcgtc gagccgatgg
    11881 gcaacgagac gctcgtcgac gtgcgggtca agggcgagcg gctgacgctg cgcgcccgcc
    11941 gcggatttac agcgccgatc ggttcgaccg tcggcgtgac gttcgacccc gccaatgcgt
    12001 gtttcttcga caaggcgggt aacacagtgg tgcatcgtgc acccaacaag ggagacaggt
    12061 catgactgat aacaatccct tcgggcggcc gatccgccgc cggaccctgc tgcaaggcag
    12121 tgccggcctc gcgatcgccg cggccctggg gggaaccgca accgcgccgg cacgggccgc
    12181 cgacgccaag aaggtgatca tcggcgcgtt tgccgatggc gggctgacgc cgttcaagga
    12241 aaagatcatc ccgctggcca agagccaggg cttcgacatc accttcctcg aggacgagta
    12301 cggggtgacg ctggagaagt ggtttgccga cgcgcagaac ggcgccggac agtacgatct
    12361 ctacctgctc gacgatccgt gggtgccgca gttcggggcc gccaacgtgc tcgaggacct
    12421 cggggccggc ggcatcgacg gcacgagcag cgactggatc gggccgctga tcgacatggg
    12481 ttactggccg ccgcgggtcg ggccgcgcgt caagggcttc gagaccgcca cgccgaccct
    12541 cgtgacggtg ccgttcgtcg gcgatctgca gacgctcacc taccgcaacg acgtcttcac
    12601 gaacggcgcg ccgcagacct gggacgacgt catcaccatg ggcaaggcgg gcgtcgcagc
    12661 cggcacgatc aaatatccgg tggtgttccg cggcgtcacc ggcaacccga tcgtcaccag
    12721 ctggtatccg gtcttcctgt cgttcggggg cgagttcttc gacgacaagt ggaacgtcac
    12781 cttcaacaac gacaagggca aggctgcggc cgagttcttc gtcggcacga tgaagcagaa
    12841 tgcgcctccc ggcgtggtcg agttcgactc cgaccaggag ggtgcagcga tcctcggcgg
    12901 cgatgccggg gcaatcatcc agtactcggg caacgccatc aagtcggacg acccgacgca
    12961 gaccaaggtg cccggcaagc tcgacttcgg cgtcgtgccg aagcaggaaa aggcgatcgc
    13021 ccagctcggc atcttcatcg ccggggtgcc gaag
//
LOCUS       DATAZA010000210         5079 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4084692, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000210 DATAZA010000000
VERSION     DATAZA010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5079
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4084692"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..874
                     /locus_tag="VHZ56_05350"
     CDS             <1..874
                     /locus_tag="VHZ56_05350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018326774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX4297428.1"
                     /translation="AGLTMPASPTWDFIKQAADKMTDRANGINGICLRGKAGWGENMA
                     LLTSMNNSNGGSWFDMKWHPQFDQPAWKTTLQYYVDLMKADGPAGSSSNGYTENQALF
                     QQGKCGMWIDATVAAGSLIDPKQSTVPAANVAWAVAPTGTGIADHGNWLWSWALAIPA
                     SSQKIDAAQKFIAWATSKHYEDVVAASLGWANVPPGTRTSLYSNADYQKASPFATATL
                     NAINAADTVHPTVNPVPYTGGQFVAIPEFQGLGDTVGQIFSAALAGQTSVDDALKQAQ
                     DVATRTMTKAGYIK"
     gene            998..1870
                     /locus_tag="VHZ56_05355"
     CDS             998..1870
                     /locus_tag="VHZ56_05355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018497491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX4297429.1"
                     /translation="MATRNTSGLARAMLTPSVAVLFVWMIVPLVLTLWYSFQNYNLIN
                     PINNGFAGWSNYYYFLTDPSFFQAFANTLILVVSVLAITVVGGVLLGLLLDQPIFGQG
                     IVRILVISPFFVMPTVAALVWKNMMMDPNYGIFAWIATRLGLAPVAWLESYPLFSIII
                     IVSWQWLPFATLILLTALQSLDEDQKEAAGMDGANFLRLFWYITLPHLSRAITVVILI
                     ETIFLLGVFAEILVTTSGGPGYASTNIAYLIYHQALLDYDVGGASAGGVIAVILANIV
                     AIFLVRIVGKNLDA"
     gene            1883..2713
                     /locus_tag="VHZ56_05360"
     CDS             1883..2713
                     /locus_tag="VHZ56_05360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014329271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX4297430.1"
                     /translation="MARTVSTSGKWGWTIFAWIVALLIFFPILWTILTSFKTEGDAIL
                     FPPAFFPPHWTLENFFEVQSRSDYFRHFFNSVVISVGSTVLGCIIAVPAAWSMAFSPT
                     KRTKDILMWMLSTKMMPAVGVLVPIYLIFKTLGLLDNLFGLTIILTLIDLPIVVWMLY
                     TYFKEIPVDILEASRMDGAVLWKEIVYVLLPMAVPGIASTMLLNIILAWNEAFWTLNL
                     TAANAAPLTAFIASYSSPEGLFWAKLSAASTLAIAPILVLGWLSQKQLVRGLTFGAVK
                     "
     gene            2726..3733
                     /locus_tag="VHZ56_05365"
     CDS             2726..3733
                     /locus_tag="VHZ56_05365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006325952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4297431.1"
                     /translation="MGSIELQHVNKSFGTHAVIPDASLQIEDGEFVVFVGPSGCGKST
                     LLRLIAGLEDTTSGRILLDGQDMTDTSSAKRQLAMVFQSYALYPHMTVAQNIGFPLKM
                     ANMDKAAIEAKVQEAARVLNLGSYLDRRPRNLSGGQRQRVAIGRAIVREPKAFLFDEP
                     LSNLDAALRVNMRLEISELHQQLKTTMVYVTHDQVEAMTMANRIVVLNAGNIEQFGTP
                     MELYRNPTNRFVAGFIGSPKMNFVDGPEAQKHGAFAIGARPEHIQVSTSSGMWKGTIG
                     VAEHLGSDTFLHVNVDGLGLMTVRAEGEKQLHHGDAVWLTPDPTRIYRFDKDGRTLAA
                     N"
     gene            3746..>5079
                     /locus_tag="VHZ56_05370"
     CDS             3746..>5079
                     /locus_tag="VHZ56_05370"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014133027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HEX4297432.1"
                     /translation="MPIELSRDAFKELGETAAVPAYDPRSLKAGIVHFGVGNFHRAHQ
                     AVYLDDLFNLGLDHDWGLVGAGVRPADEDMRQKLMAQDWLTTVVEQEADSASARVTAP
                     MIDHLRIGDTASIIARLADPAIRIVSLTITEGGYYIDPATQRFDPTHPDIAADAAAPK
                     APRTVFGLILAGLGARRQAGLQPFTVMSCDNIPGNGHVTQNAIVGLADLFDHELAGWV
                     RTRVAFPNGMVDRITPATGERERNLLSQDFHIADNWPVFCESFRQWVIEDNFPAGRPA
                     LEKVGVQFVQDVAPFEHVKIRILNGGHATIAYPAALMDIHFVHEAMAHPLIRGFLEKV
                     ERDEIIPIVPPVPNTSLEQYFSLVDRRFSNPKIGDTVSRLCLDGSNRQPKFILPSAAD
                     RVKSGQSVAGLALVSAFWARYCAGETDSGKPIAPNDPSWSRLTAQAKRAKADP"
BASE COUNT          883 a         1825 c         1499 g          872 t
ORIGIN      
        1 ggccggcctc accatgccgg cgtcgcccac ctgggatttc atcaagcagg cggccgacaa
       61 gatgaccgac cgcgccaacg gcatcaacgg catctgcctc cgcggcaagg ccggctgggg
      121 cgagaacatg gcgctgctca cgtcgatgaa caactcgaac ggcggcagct ggttcgacat
      181 gaagtggcat ccgcagttcg accagccggc gtggaagacc acgctgcagt actacgtcga
      241 cctgatgaag gccgatggcc cggctggctc gtcctcgaac ggctacaccg agaaccaggc
      301 gctgttccag cagggcaaat gcggcatgtg gatcgacgcc accgtcgccg ccggctcgct
      361 gatcgacccc aagcagtcga ccgttccggc cgccaacgtc gcctgggccg tcgccccgac
      421 cggcaccggc atcgccgatc atggcaactg gctgtggtcg tgggcgctcg ccatcccggc
      481 gagctcgcag aagatcgacg ccgcgcagaa gttcatcgcc tgggcgacgt ccaagcacta
      541 tgaggacgtg gtcgcggcat cgctcggctg ggccaacgtg ccgccgggca cccgcacctc
      601 gctctactcc aatgccgact accagaaggc ctcgcccttc gcgaccgcga cgctcaatgc
      661 catcaacgcg gccgacaccg tgcatccgac cgtgaacccg gtgccctata ccggcggcca
      721 gttcgtcgcc atccccgagt tccagggtct cggcgacacc gtcgggcaga tcttctcggc
      781 tgcgctggcc gggcagacca gcgtcgacga cgcgctcaag caggcccagg acgtggcgac
      841 ccgtaccatg accaaggccg gctacatcaa gtagactcct ccctagaccg gaggtcgtcc
      901 gggacttcgg ttccgggcga cctcaggaaa tgactgcccc ggcaaccggg gtcgccgacg
      961 aggcaaagcc cgcggcagag gatttgggga ggggatcatg gcaacccgca acaccagcgg
     1021 cctggctcgt gccatgctga cgccgtcagt ggccgtgctg ttcgtctgga tgatcgttcc
     1081 actggtgctg acgctctggt actcgttcca gaactacaac ctcatcaacc cgatcaacaa
     1141 cggcttcgcg ggctggtcga actactacta tttcctcacc gatccctcgt tcttccaggc
     1201 cttcgccaac accctgatcc tcgtcgtctc ggtgctggcg atcaccgtcg tcggcggcgt
     1261 gctgctcggc ctgctgcttg accagccgat cttcggccag ggcatcgtgc gcattctcgt
     1321 catctcgccg ttcttcgtca tgccgacggt cgccgcgctg gtgtggaaga acatgatgat
     1381 ggaccccaac tacggcatct tcgcctggat cgcgacccgc ctcgggctgg cgccggtcgc
     1441 ctggctcgag agctatccgc tgttctcgat catcatcatc gtgtcctggc agtggctgcc
     1501 cttcgcgacg ctcatcctgc tgacggcgct gcagtcgctc gacgaggacc agaaggaagc
     1561 ggccggcatg gacggcgcca atttcctgcg gctgttctgg tacatcacgc tgccgcacct
     1621 gtcgcgcgcc ataaccgtcg tgatcctgat cgagacgatc ttcctgctcg gcgtgttcgc
     1681 cgaaatcctc gtcaccacca gcggcggccc cggctacgcc tcgaccaata tcgcctacct
     1741 catctaccac caggccctgc tcgactacga tgtcggcggc gcctcggccg gcggcgtgat
     1801 cgcggtcatc ctcgccaaca tcgtggcgat cttcctggtc cgcatcgtcg gcaagaacct
     1861 ggacgcgtga ggggaaccga acatggcacg caccgtctcg acatcaggca aatggggctg
     1921 gacgatcttc gcctggatcg tcgcgctgct gatcttcttt ccgatcctgt ggaccatcct
     1981 caccagcttc aagaccgagg gtgacgcgat cctgtttccg ccggcgttct ttccgccgca
     2041 ctggacgctc gagaacttct tcgaagtgca gtcccgctcc gactacttcc ggcacttctt
     2101 caattcggtg gtgatctccg tcggctcgac ggtgctcggc tgcatcatcg cggtgcccgc
     2161 cgcctggtcg atggcgtttt cgccgaccaa gcgcaccaag gacatcctga tgtggatgct
     2221 ctccaccaag atgatgccgg ccgtcggcgt gctggtcccg atctacctga tcttcaagac
     2281 cctcggcctg ctcgacaacc tcttcggcct caccatcatc ctgacgctga tcgacctgcc
     2341 gatcgtggtg tggatgctct acacttactt caaggaaatc ccggtcgaca tcctcgaagc
     2401 gagccgcatg gacggcgcgg tgctgtggaa ggagatcgtc tacgtgctgc tgccgatggc
     2461 ggtgcccggc atcgcctcga ccatgctgct caacatcatc ctcgcctgga acgaggcgtt
     2521 ctggacgctg aacctgaccg ccgccaacgc cgcgccgctc accgccttca tcgcctcata
     2581 ttccagtccc gagggactgt tctgggccaa gctcagcgcc gcatcgacac tcgccatcgc
     2641 gcccatcctg gtgctgggct ggctcagcca gaagcagctc gtgcgcggcc tgaccttcgg
     2701 cgccgtgaaa taggggaaga gaaaaatggg ctccatcgaa ctgcagcacg tcaacaaatc
     2761 cttcggcacc cacgccgtca ttcccgatgc cagcctccag atcgaggacg gcgagttcgt
     2821 ggtgttcgtc gggccctcgg ggtgcgggaa atcgaccctg ctccggctga tcgccgggct
     2881 cgaggacacc acctccggac gcatcctgct cgacggccag gacatgaccg atacctcttc
     2941 agccaagcgc cagttggcaa tggtgttcca gtcctatgcg ctctacccgc acatgacggt
     3001 ggcgcagaac atcggcttcc cgttgaagat ggcgaacatg gacaaggcgg cgatcgaggc
     3061 caaggtgcag gaggccgcgc gcgtcctcaa tctcggcagc tatctcgacc gccggccgcg
     3121 caacctctcg ggcggccagc gccagcgcgt cgccatcggc cgcgccatcg tgcgcgagcc
     3181 caaggccttc ctgttcgacg agccgctcag caacctcgac gcggcgctgc gcgtcaacat
     3241 gcggcttgag atttcggaac tgcaccagca gctgaagacc accatggtct atgtcaccca
     3301 cgaccaggtc gaggcgatga ccatggccaa ccgcatcgtc gtgctcaacg ccggcaacat
     3361 cgagcagttc ggcacgccga tggagctcta tcgcaacccg accaaccggt tcgtcgccgg
     3421 cttcatcggc tcgcccaaga tgaacttcgt cgacggcccg gaggcgcaga agcacggcgc
     3481 ctttgccatc ggcgcccggc ccgagcacat ccaggtgtcg accagctccg gcatgtggaa
     3541 gggcacgatc ggggtcgccg aacacctcgg gtccgacacc ttcctccatg tcaacgtcga
     3601 cggcctcggg ctgatgacgg tgcgtgccga aggcgaaaag cagctgcacc acggcgacgc
     3661 cgtctggctc acccccgacc cgacgcgcat ctaccgcttc gacaaggatg gccgcaccct
     3721 cgcggccaat tgaggactta cgacgatgcc gatcgagctg tcgcgcgatg cgttcaagga
     3781 actgggggag acggccgccg tccccgccta tgacccgcgc tcgctcaagg ccggcatcgt
     3841 gcatttcggc gtcggcaatt tccatcgcgc ccaccaggcg gtgtatctcg acgacctgtt
     3901 caacctcggg ctcgaccacg actggggcct ggtcggcgcc ggcgtgcgcc ccgccgacga
     3961 ggacatgcgc cagaaactca tggcgcagga ctggctcacg acggtggtcg agcaggaagc
     4021 tgattccgcg agcgcccgcg tcaccgcgcc gatgatcgat cacctccgga tcggcgacac
     4081 cgcctcgatc atcgcccgcc tcgccgaccc ggccatccgg atcgtctcgc tgaccatcac
     4141 cgagggcggc tactatatcg accccgccac gcagcggttt gacccgaccc accccgacat
     4201 tgccgcggac gccgccgcgc cgaaggcgcc ccggaccgtg ttcggcctga tccttgcggg
     4261 cctgggggca cgccggcagg ccggcctgca gcccttcacc gtgatgagct gcgacaacat
     4321 cccgggtaac ggccacgtca cgcagaacgc catcgtcggg ctcgccgacc tgttcgacca
     4381 cgaactcgcc ggctgggtgc gcacccgggt cgcctttccc aacggcatgg tcgaccgcat
     4441 caccccggcg accggcgagc gcgagcgcaa cctcctcagc caggatttcc acatcgccga
     4501 caactggccg gtgttctgcg aaagcttccg gcagtgggtg atcgaggaca atttcccggc
     4561 cggccggccg gcgctcgaaa aggtcggcgt gcagttcgtg caggacgtcg cgccgttcga
     4621 gcacgtgaag atccgcatcc tcaacggcgg tcacgccacc atcgcctatc cggctgcgct
     4681 catggacatt cacttcgtcc acgaagcgat ggcgcacccg ctgatccgcg gcttcctcga
     4741 gaaggtcgag cgcgacgaga tcatcccgat cgtgccgccg gtgcccaaca ccagcctcga
     4801 gcaatatttc agcctcgtcg atcgccgctt ctccaatccc aagatcggcg acaccgtcag
     4861 ccgtctctgc ctcgacggct ccaaccggca gcccaaattc atcctgccct cggctgcgga
     4921 ccgggtgaaa tcgggccagt ccgtcgccgg cctcgctctg gtctcggcgt tctgggcccg
     4981 ctactgcgcc ggcgaaaccg acagcggcaa gcccatcgcg ccaaatgatc ccagctggtc
     5041 ccgcctcacg gcccaggcca agcgcgccaa ggccgatcc
//
LOCUS       DATAZA010000211         3810 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1183225, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000211 DATAZA010000000
VERSION     DATAZA010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3810
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1183225"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(82..702)
                     /locus_tag="VHZ56_05375"
     CDS             complement(82..702)
                     /locus_tag="VHZ56_05375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD family hydrolase"
                     /protein_id="HEX4297433.1"
                     /translation="MTRGAQRAWQRMLSGRRLDILDPSPVDVELSDIAHGLARVARWN
                     GQTKGDYPFSVAQHSVLVLEIFSAQAPGADATARLHALLHDAPEYVMGDIISPFKAAM
                     GGNYKEVEDRLLGAVHLHFGLNAITPVAVGRQIKRADKEAAFHEAVQLAGFGAEEARK
                     FFGEPSVAAFDLERFGELIRPWPTREAHDRFVDAVDMLATGLHRTS"
     gene            complement(805..1581)
                     /locus_tag="VHZ56_05380"
     CDS             complement(805..1581)
                     /locus_tag="VHZ56_05380"
                     /inference="COORDINATES: protein motif:HMM:TIGR03317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein"
                     /protein_id="HEX4297434.1"
                     /translation="MPTMLRPSRALFRFSGADAQKLLFDVVTGRLLAEPGAAIWWALL
                     SPQGKIQAEGVSTYADGAFWLDVDAGVADGFLKRMKMYRLRAAVEIADLRQSHAVGWD
                     RGAPHTRVIGTEAESAQWDAADSSYDAARIARGVAEQGSDFAVDTLFPHDIGMDLLGG
                     VDFKKGCYIGQEVVSRMEHRGTARRRPVIVSGIEGTGGAVLAGGREAGTTGRVVGGKA
                     VAIVRLDRFDGGEVTVDGKPVTVALPEWATYRLGESAGAE"
     gene            1608..2945
                     /locus_tag="VHZ56_05385"
     CDS             1608..2945
                     /locus_tag="VHZ56_05385"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEX4297435.1"
                     /translation="MAHYDAIFKHGTVVNQDGRHAADIGIRDGRIAALGNLAADTADA
                     DTDCAGLHILPGVIDTQVHFREPGLEHKEDLATGSLSAVMGGVTAVFEMPNTSPLTTT
                     RDTFADKIARATGRMHCDFAFFIGGTHDNVAELPALERLPGCAGVKVFMGSSTGSLLV
                     ADDAGVGAIIAAISRRASFHSEDEYRLEQRKPLRVPGDPRSHPVWRDPEAAMSSTRRL
                     VALAHRYGKRIHVLHISTAEEMAFLAGHKDVATVEVTPHHLTLDETAYDRLGSFAQMN
                     PPVRDKAHRAAIWAGVADGTVDVLGSDHAPHTRAEKQKPYPDSPSGMTGVQTLVPIML
                     DHVAAGRLSLERFVDLSSAGPARIFNIARKGRIATGYDADLSIVDLARRETITNAWIA
                     SKAGWTPYDGVAVTGWPVGTIVRGNTVMWQGELLAPAAGRPVQFLETLAPLPA"
     gene            complement(2951..3229)
                     /locus_tag="VHZ56_05390"
     CDS             complement(2951..3229)
                     /locus_tag="VHZ56_05390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297436.1"
                     /translation="MREDKPSIPDFGGEGTRDEHRRERQLALEYLAEAWNTAEDEGVE
                     TMALAHASLFAAIATMVRAHGEEAIATLVAALPDRIRAGEYNLDRNTH"
     gene            complement(3323..>3810)
                     /locus_tag="VHZ56_05395"
     CDS             complement(3323..>3810)
                     /locus_tag="VHZ56_05395"
                     /inference="COORDINATES: protein motif:HMM:TIGR02301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TIGR02301 family protein"
                     /protein_id="HEX4297437.1"
                     /translation="ADHAAARQRAAGGAADVRPDVSRRLAADTMDGLGRRMRVRTLAA
                     VLSLALAAPAASLPALAVDPPYEPQMERLAEVMGSLYFLDPLCKPGSPDWRAQVAELI
                     KLDQPDQDREERLNGAFNAGYTAYSRLYRTCTDSAQAALARLLTEAEATARDIHARYA
                     E"
BASE COUNT          593 a         1506 c         1144 g          567 t
ORIGIN      
        1 tcgggtgcga agtgtcgtta acctcgcatc aaccatgcgg ccgccgggcg cgtcaaaatg
       61 gaacgcccgt ttaccttaat ttcacgatgt tcggtggagg ccggtcgcca gcatgtcgac
      121 ggcatcgacg aatcggtcgt gcgcctcgcg cgtcggccat ggccggatca gctcgccgaa
      181 gcgctcgagg tcgaacgccg cgacgctcgg ctcgccgaag aatttccgcg cctcctcggc
      241 cccgaagccg gcaagctgca ccgcctcgtg gaacgccgcc tccttgtccg cccgcttgat
      301 ctgccgcccg accgcgacgg gggtgatggc gttgagcccg aaatgcaggt gcacggcacc
      361 gagcagccgg tcctccacct ccttgtagtt gccgcccatc gctgccttga acggcgaaat
      421 gatgtcgccc atcacgtatt cgggcgcatc gtgcagcagc gcatggagcc gggccgtggc
      481 gtccgcaccc ggcgcctgcg ccgaaaagat ctccagcacc agcaccgaat gctgcgccac
      541 cgagaacgga tagtcgccct tggtctgccc gttccaccgc gccacccgcg ccagcccgtg
      601 cgcgatgtcg ctcagctcga cgtcgaccgg ggacgggtcg aggatatcga gccgccggcc
      661 gctcagcatg cgttgccagg cccgttgcgc gccgcgcgtc atcgttcacc cccaaacccg
      721 cagtcggcgc tcctcccctg caaagcgggg aggggacatg cgcagcatgg tggaagggcg
      781 gccccgccac cgagcccgcc gacgctactc agcgcccgcc gattccccaa gccggtacgt
      841 cgcccactcc ggcagcgcca ccgtcaccgg cttgccatcc accgtcacct cgccgccgtc
      901 gaaccggtcg agccgcacga tcgccactgc cttgccgccg accacgcgcc ccgtcgtccc
      961 ggcctcgcgc ccgcccgcca gcaccgcgcc accggtcccc tcgatcccgc tgacgatcac
     1021 cggccgccgg cgcgccgtgc cgcgatgctc catccggctg accacttcct ggccgatgta
     1081 gcagcccttc ttgaaatcca ccccgccgag caggtccatg ccgatgtcgt gcgggaacag
     1141 cgtgtcgacc gcaaaatcgc tgccctgttc cgcgacaccc cgcgcgatgc gtgcagcgtc
     1201 atacgaagaa tcggccgcat cccattgcgc cgattccgct tccgtcccga tcacccgcgt
     1261 gtgcggcgcc ccgcggtccc agcccaccgc gtggctctgc cgcaaatccg cgatctccac
     1321 cgctgcccgc agccggtaca tcttcatccg cttgaggaag ccgtccgcca ccccggcgtc
     1381 gacgtcgagc cagaacgccc cgtcggcata ggtgctcacc ccttcggcct ggatcttgcc
     1441 ctgcgggctg agcagcgccc accagatcgc cgctcccggc tcggctagca gccgtcccgt
     1501 caccacgtcg aacagcagct tctgggcgtc ggcgcccgaa aagcggaaca gcgcccgcga
     1561 cgggcgaagc attgtgggca tgtgcgccat ccagtaggaa accagacatg gcgcactacg
     1621 acgcgatctt caagcacggc accgtcgtca accaggacgg ccggcacgcc gccgacatcg
     1681 gcatccgcga cggccgcatc gccgcactgg gcaacctcgc cgccgacact gccgacgccg
     1741 acaccgactg cgcgggcctc cacatcctcc ccggcgtgat cgacacccag gtgcatttcc
     1801 gcgagcccgg gctcgagcac aaggaagacc tcgccaccgg ctcgctctcg gccgtcatgg
     1861 gcggcgtcac cgccgtgttc gagatgccca acaccagccc gctgaccacc acgcgcgaca
     1921 ccttcgccga caagatcgcc cgcgccaccg gccgcatgca ctgcgatttc gccttcttca
     1981 tcggcggcac ccacgacaat gtcgccgaac tgcccgcgct cgagcggctc cccggctgcg
     2041 ccggcgtaaa ggtcttcatg ggctcctcga ccggcagcct gctggtcgcc gacgacgccg
     2101 gcgtcggcgc gatcatcgcc gccatctccc gccgcgccag tttccattcc gaggacgaat
     2161 accgcctcga gcagcgcaag ccgctccgcg tccccggtga tccgcgctcg catccggtgt
     2221 ggcgcgatcc ggaggcggcg atgagctcca cccgtcgcct cgtcgcgctc gcccatcgat
     2281 acggcaagcg catccacgtc ctccacatct ccaccgccga ggagatggcc ttcctcgccg
     2341 gccacaagga cgtcgccacc gtcgaggtca cgccgcacca cctgaccctc gatgaaaccg
     2401 cctatgaccg cctcggcagc ttcgcccaga tgaacccgcc ggtgcgcgac aaggcgcacc
     2461 gcgccgccat ctgggccggt gtcgccgacg gcaccgtcga cgtcctcggc tccgaccatg
     2521 ccccgcacac ccgcgccgaa aagcagaaac cctatcccga ctcgccgtcc ggcatgaccg
     2581 gcgtgcagac cctcgtgccg atcatgctcg accacgtcgc cgccggccgc ctgagcctcg
     2641 agcgtttcgt cgacctgtcg agcgccggcc cggcccgcat cttcaacatc gcccgcaagg
     2701 gccgcatcgc caccggctac gacgccgacc tcagcatcgt cgacctcgcc cgccgcgaaa
     2761 ccatcaccaa cgcctggatc gccagcaagg ccggctggac cccctatgac ggcgtcgccg
     2821 tcaccggctg gccggtcggc accatcgtgc gcggcaacac cgtgatgtgg cagggcgaac
     2881 tgctcgcccc cgccgccggc cgtcccgtac aattcctgga aacgctcgcg ccgctgccgg
     2941 cctaggcgtc tcagtgcgtg ttgcggtcga gattatactc gccggcgcgg atgcggtcgg
     3001 gcagggcggc aaccagcgtc gcgatcgcct cctcgccatg cgcccgcacc atcgtcgcga
     3061 tcgccgcgaa cagcgaggca tgtgccagcg ccatcgtctc gacgccctcg tcctcggcgg
     3121 tgttccaggc ttcggcaaga tattcgagcg ccagctggcg ttcccggcga tgctcgtcgc
     3181 gcgtgccctc gccgccgaaa tcgggaatgc tgggtttgtc ctcgcgcatc cgcctgctct
     3241 agcatcggcc cccggctgcc ggcatgacac ctcaccggaa ggttaatatc acctcaggcc
     3301 ttatacttaa ttcgggcgcc gatcactcgg cgtagcgcgc gtggatatcg cgcgccgtcg
     3361 cctcggcctc agtcagcagc cgcgccagcg ccgcctgcgc cgaatccgtg cacgtccggt
     3421 agagccgcga ataggcggtg tagccggcat tgaacgcgcc gttcagccgc tcctcgcgat
     3481 cctggtcggg ctggtcgagc ttgatcagct ccgccacctg cgcccgccag tccggactgc
     3541 ccggcttgca cagcggatcg aggaaataca ggctccccat cacctcggcc agccgttcca
     3601 tctgcggctc gtatggcgga tcgacggcca gcgccggcag cgatgcggcg ggcgcggcga
     3661 gggcgagcga aagaacggcg gcgagcgtgc ggacgcgcat gcgccttcct agtccgtcca
     3721 tcgtgtcggc ggcaaggcgg cggctcacgt ccggtcgaac atccgcagcg ccgcctgcag
     3781 cacgctgtcg agctgcggcg tggtccgcag
//
LOCUS       DATAZA010000212         3618 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2344700, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000212 DATAZA010000000
VERSION     DATAZA010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3618
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2344700"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..924
                     /locus_tag="VHZ56_05400"
     CDS             <1..924
                     /locus_tag="VHZ56_05400"
                     /inference="COORDINATES: protein motif:HMM:TIGR00238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KamA family radical SAM protein"
                     /protein_id="HEX4297438.1"
                     /translation="HPGEDPDPLGEEHDMVVPGLVHRYPDRVLFLTTGFCSTYCRYCT
                     RSRMVGETNGEYSFSVSQWEKAAQYIEAHPEVRDCLLSGGDPLSIGDDKLEWLLTRLR
                     SIKHLEFIRIGTKIPVVMPQRITLKLTRMLKRFHPLWMSVHFTHPDELTPETVEACGR
                     LADAGIPLGSQTVLLKGINDSIEVMKPLMHGLLKARVKPYYIFQCDPVSGSAHFRTPV
                     EKGLEIIRGLRGFTTGYAVPQFIIDAPGGGGKVSVGPDFLLGRDGDDILIRNFEGDTY
                     RYHDPGGSVGKPENALREQGFALNPNGVYTE"
     gene            921..1307
                     /locus_tag="VHZ56_05405"
     CDS             921..1307
                     /locus_tag="VHZ56_05405"
                     /inference="COORDINATES: protein motif:HMM:NF013052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SET domain-containing protein-lysine
                     N-methyltransferase"
                     /protein_id="HEX4297439.1"
                     /translation="MTAKIVLAEAGLLKLVPIDGKGRGVVATRRIARGRLVEASPVVR
                     MKKRDRLDRSTVLSHYPFEWIDPPYVQAFPLGFAGLLNHSDEPNCKIEADIAGEVLCI
                     YTLKTVAAGTELTWNYGIDPWFDVAP"
     gene            1309..2280
                     /locus_tag="VHZ56_05410"
     CDS             1309..2280
                     /locus_tag="VHZ56_05410"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297440.1"
                     /translation="MRIGFTYDLREDYLAMGFSDEEAGEFDVIETIDAVEAAIRGHGH
                     EVERIGGIKALVAALAAGRSWPLVWNMCEGAWGIAREAQVPALLEAYRIPFVFSTADV
                     QVAAMDKALAKLVVAAAGVPTPAFAVVRSARDLQAVKLPYPLFVKPLAEGTSKGVQET
                     SKVADRAQLTAKCLEVLKTYRQPALVETFLPGREFTVGLLGAGAGARLIGVSEIRFLP
                     GGDPSAYSYKNKMQAFDELTLATGPLADEAGAVALAAWRALGCRDAGRIDIRCDADGR
                     PSFIECNPLAGLRPNWSELTQLAALVGMSYDTLIGAILDEAIARTAS"
     gene            2277..3209
                     /locus_tag="VHZ56_05415"
     CDS             2277..3209
                     /locus_tag="VHZ56_05415"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297441.1"
                     /translation="MRVLILTSPADAAGRPDNDDTFVQAAEIAICLDRLGHETRTLAY
                     AHGHEFGGIADFAPHLVFNLVEDLPEGPDQLHTVTRVLDLNALPYTGAATEPLRLLGN
                     KPVMKARLRAAGLPVAAGLGEAGERARYIVKSAVEHASLGLDAGSVVTGAGAALLLVA
                     RREAEFGGQWFAEAYIEGREFNLALLDGDLLPLAEILFTDHPRDAPRIVGYAEKWDTG
                     SHAFAATPRAFPPREEPLFSELERLARAAWELFDLTGYARVDFRVDPAGRPYILELNA
                     NPCLAADAGFCAAAAQLGLSQSDVVARLLAAAQA"
     gene            3224..>3618
                     /locus_tag="VHZ56_05420"
     CDS             3224..>3618
                     /locus_tag="VHZ56_05420"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4297442.1"
                     /translation="MPPDHPTRYRRVLEPADPSRIRALVDATGVFSAEEARVAAELAT
                     TTLDGSETYRWLLVEAGGQLVGYSCFDRIPLSRVSFDLYWIAVRPEARGTGLARELID
                     RTAKLARSKRGLWMFAETSSRPAYAPARS"
BASE COUNT          563 a         1371 c         1118 g          566 t
ORIGIN      
        1 catccgggcg aggaccccga cccgctgggc gaggagcacg acatggtcgt ccccggcctc
       61 gtccaccgct accccgaccg cgtgctgttc ctcaccaccg gcttctgctc cacctactgc
      121 cgctattgca cccgctcgcg catggtcggc gagaccaacg gcgaatattc cttctccgtc
      181 agccagtggg aaaaggcggc gcagtacatc gaggcccatc cggaagtgcg cgactgcctg
      241 ctctcgggcg gcgatccgct gtccatcggc gacgacaagc tcgaatggct gctcacccgg
      301 ctgcgctcga tcaagcacct cgagttcatc cgcatcggca ccaagatccc ggtggtgatg
      361 ccgcagcgca tcacgctcaa gctgacgcgc atgctgaagc gcttccaccc gctgtggatg
      421 tcggtgcatt tcacccaccc cgacgagctg acgcccgaga ccgtcgaggc ctgcggccgg
      481 cttgccgacg ccggcatccc gctcggcagc cagaccgtgc tgctcaaggg catcaacgat
      541 tcgatcgagg tgatgaagcc gctgatgcac ggcctgctga aggcgcgggt gaagccatat
      601 tacatcttcc agtgcgaccc ggtgtccggc tcggcgcact tccgcacccc ggtggaaaag
      661 ggcctcgaga tcatccgcgg cctgcgcggc ttcaccaccg gctacgccgt gccgcagttc
      721 atcatcgatg cgcccggcgg cggcggcaag gtgtcggtcg ggcccgattt cctcctcggc
      781 cgcgatggcg acgacatcct gatccgcaat ttcgagggcg acacctatcg ctaccacgat
      841 ccgggcggca gcgtcggcaa gcccgagaac gccctgcgcg aacagggctt cgccctcaac
      901 ccgaacggcg tttacacaga gtgacggcaa agatcgtgct ggctgaggcc ggcctcctga
      961 aactggtccc catcgatggc aagggccgcg gcgtcgttgc cacgcgccgc atcgcccgtg
     1021 gccggctggt cgaggcctcg ccggtggtgc gcatgaaaaa gcgcgaccgc ctcgatcgct
     1081 cgacagtgct cagccactac ccgttcgagt ggatcgatcc gccctatgtg caggccttcc
     1141 cgctcggctt tgccggcctg ctcaatcact cggacgagcc gaactgcaag atcgaggccg
     1201 acatcgccgg cgaggtgctc tgcatctaca ccctgaagac cgtcgcggcc ggcaccgagc
     1261 tgacctggaa ctacggcatc gatccgtggt tcgacgtcgc tccctgagat gcggatcggc
     1321 ttcacctacg atctgcgcga ggactacctc gcgatgggct tttcggacga agaagccggc
     1381 gagttcgacg tcatcgagac catcgacgcg gtcgaggcgg cgatccgcgg ccatggccac
     1441 gaggtggagc gcatcggcgg catcaaggcg ctggttgctg cgctcgccgc cggccgcagc
     1501 tggccactgg tctggaacat gtgcgaaggc gcctggggca tcgcccgcga ggcacaggtg
     1561 ccggccctgc tcgaagccta tagaataccg ttcgtgtttt ccaccgccga cgtccaggtc
     1621 gccgccatgg acaaggcgct cgccaagctg gtggtcgctg ccgccggcgt gccgacgccg
     1681 gctttcgccg tcgtccgctc ggcgcgcgac ctgcaggcgg tgaagcttcc ctacccattg
     1741 ttcgtcaagc cgctggcgga aggcacctcc aagggcgtcc aggagaccag caaggtcgcc
     1801 gatcgcgccc agctgacggc caaatgcctc gaagtgttga aaacctaccg ccagccggcg
     1861 ctggtcgaga ccttcctgcc cggccgcgaa ttcaccgtcg ggctgctcgg cgccggcgcc
     1921 ggcgcgcgcc tcatcggcgt cagcgaaatc cgcttcctgc cgggcggcga tccgtccgcc
     1981 tattcgtaca agaacaagat gcaggccttc gacgagctga ccctcgcgac cggaccgctc
     2041 gccgacgagg ccggcgccgt ggcgctcgcc gcctggcgcg ccctcggctg ccgcgacgcc
     2101 ggccgcatcg acatccgctg cgacgccgac ggccggccga gcttcatcga atgcaacccg
     2161 ctcgccgggc tgcggcccaa ctggtccgag ctcacccagc tcgccgccct cgtcggcatg
     2221 agctacgaca ccctgatcgg cgccatcctc gacgaagcca tcgcccgaac cgcgtcatga
     2281 gggtgctcat cctcacctcg ccggccgacg ccgccggccg gccggacaac gacgacacct
     2341 tcgtccaggc ggccgagatc gcgatctgcc tcgatcgcct cggccacgag acgcgcacgc
     2401 tcgcctacgc gcacggccac gagttcggcg gcatcgccga cttcgccccg cacctcgtct
     2461 tcaacctcgt cgaggacctg ccggaaggac ccgaccagct gcacaccgtg acccgcgtgc
     2521 tcgatctcaa cgccctgccc tacaccggcg ccgccaccga gccgctgcgg ctgctcggca
     2581 acaagccggt gatgaaagca aggctgcggg ccgccggcct gccggtcgcg gcaggcctcg
     2641 gcgaggccgg cgaacgcgca cgctacatcg tcaaatccgc cgtcgagcac gccagcctcg
     2701 gcctcgatgc cggcagcgtc gtcaccggtg ccggcgcggc gctgctgctc gtcgcccgcc
     2761 gcgaagccga gttcggcggc cagtggtttg ccgaggccta catcgagggc cgcgagttca
     2821 acctcgcttt gctcgacggc gacctgctgc cgctggccga aatcctcttc accgaccacc
     2881 cccgcgatgc cccgcgcatc gtcggctatg ccgaaaaatg ggataccggc agccatgcct
     2941 ttgccgcgac gccgcgggct ttcccgccgc gcgaggagcc gctgttcagc gagctcgaac
     3001 gccttgcccg cgccgcctgg gagctcttcg acctcaccgg ctacgcccgc gtcgatttcc
     3061 gcgttgatcc ggccggccgg ccctatatcc tcgagctcaa tgccaacccc tgcctcgccg
     3121 ccgacgccgg cttctgcgcc gccgccgcgc aactgggcct cagccagtcc gacgtcgttg
     3181 cccgcctgct cgccgccgcc caggcgtgac ttcggataag cccatgccgc cggaccatcc
     3241 gacccgctac cgccgtgtgc tcgagcctgc cgatccgagc cggatccgcg ccctcgtcga
     3301 tgcgaccggg gtgttctcgg ccgaggaagc ccgcgtcgcc gccgaactgg cgaccaccac
     3361 gctcgacggc agcgagacct atcgctggct gcttgtcgaa gccggcggcc agctcgtggg
     3421 ctacagctgt ttcgaccgca ttcccctgag ccgggtcagt ttcgacctct actggatcgc
     3481 cgttcgaccc gaggcccgtg gcaccggcct cgcccgcgaa ctgatcgacc gcactgcaaa
     3541 gcttgcccga tccaagcgcg ggctctggat gtttgccgaa acctcgtcgc gccccgccta
     3601 cgcgccggcc cgcagctt
//
LOCUS       DATAZA010000213        16419 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2692835, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000213 DATAZA010000000
VERSION     DATAZA010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 16419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16419
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2692835"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..906
                     /gene="ruvB"
                     /locus_tag="VHZ56_05425"
     CDS             <1..906
                     /gene="ruvB"
                     /locus_tag="VHZ56_05425"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEX4297443.1"
                     /translation="QRQAALDHVLFVGPPGLGKTTLAQIVARELGVGFRATSGPVIAK
                     AGDLAALLTNLEQRDVLFIDEIHRLNPAIEEILYPAMEDYQLDLIIGEGPAARSVRID
                     LAKFTLIGATTRAGLLTTPLRDRFGIPVRLNFYSPEELVQIVERGARLLGVGMTSDGA
                     LEIARRSRGTPRIAGRLLRRVTDFALVDGAKSISRTIADKALLRLEVDARGLDALDRR
                     YLKTIAEFYSGGPVGVETIAAALSEPRDALEEIVEPYLIQQGFIQRTPRGRMLTALAF
                     QHLGLTAPQGFVGMQTSLFEEPEGE"
     gene            903..1451
                     /locus_tag="VHZ56_05430"
     CDS             903..1451
                     /locus_tag="VHZ56_05430"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEX4297444.1"
                     /translation="MSGRIPWLTLGVFGLTAVVTGAMLLRPEVGVALERDPAMLHGEW
                     WRFATTWLVETDGWSQIAINGIGLLVFGVLVELRLGRAWWTVGYVVAGLAGEIAGLVW
                     QPVGGGNSVAICGLIGLFSIDQLARPAGGPPRALSAVVWLAIGLWLVTRHDIHGAALM
                     AGFVVAGVAYFTGAARQRLAAA"
     gene            1448..1846
                     /gene="ybgC"
                     /locus_tag="VHZ56_05435"
     CDS             1448..1846
                     /gene="ybgC"
                     /locus_tag="VHZ56_05435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018265583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HEX4297445.1"
                     /translation="MSVPHRLEVRVYYEDTDFSGAVYHAAYLHFFERGRTELLRAAGI
                     HHSELARDGIAFAVRSMEIEFPRAAHIDDLLVVDTAVGEISGARFTLEQSIERGDELI
                     ARARVVAVAVRAGRATRLPRSVLAAFGPGR"
     gene            2146..2949
                     /gene="tolQ"
                     /locus_tag="VHZ56_05440"
     CDS             2146..2949
                     /gene="tolQ"
                     /locus_tag="VHZ56_05440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolQ"
                     /protein_id="HEX4297446.1"
                     /translation="MFRAPLLAALAVATINLALPALAQDVSSSASVINDVVAGPVAPA
                     PNFSLLGLFLQADWIVKIVMLGLLAASVWCWAIIIDKSMLYGRANRQMNAFERVFWSG
                     QSLEELYQQMQERSSVGLGAIFIAAMKEWKRSHEQNAASFLGVQARLEKVLDVAISRE
                     SDGLERRLGFLATVASASPFIGLFGTVWGIMNSFTSIAASKSTNLAVVAPGIAEALFA
                     TALGLLAAIPATIAYNKLSADSNKLISRLEAFADEFATILSRQLEARGR"
     gene            2953..3402
                     /gene="tolR"
                     /locus_tag="VHZ56_05445"
     CDS             2953..3402
                     /gene="tolR"
                     /locus_tag="VHZ56_05445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003527592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098567 - periplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolR"
                     /protein_id="HEX4297447.1"
                     /translation="MAMAIAQGGGGGRRSRRRASKRPMSDINVTPMVDVMLVLLIVFM
                     VAAPLLTVGVPIDLPQTKAKELNTESKPITVSVTPAGDLFLGDTPVQIDGLIDAINAQ
                     ATDSTDQRIYVRGDQTANYGAVMKVMGVLSAGGYSKIGLITAQDEVK"
     gene            3408..4433
                     /locus_tag="VHZ56_05450"
     CDS             3408..4433
                     /locus_tag="VHZ56_05450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297448.1"
                     /translation="MKTGVTTSVIAHAALLIVAIVGLGSARPVEPEAVESIAVDLVPI
                     SDVTNIRAGSLDSKVVQTDTPAIVEASKPAELAQPTGNTAEDQPTPEATSKTTPAPVE
                     NTAPKPAPDPAPEKAPDPVKDPTPPTPAPVAAPDPAPTPVQPQQQQEVTTATDDTPAD
                     NVAPTPATRPVQLQKALVKDPPKDTKVATVIPKKTTTAAQPDQSKTPPDPQAKTADKV
                     AELLNAMDSRGATTGDGGSPTLGKTTGKSATLTQSQLDGLVAQIKNCMNVPAGAADAG
                     VTAELHFILDASGNVTQMPDILSDTSTPLARALASAAQRAVMRCGPYAMAVNQEVQAT
                     FDPRDLT"
     gene            4460..5770
                     /gene="tolB"
                     /locus_tag="VHZ56_05455"
     CDS             4460..5770
                     /gene="tolB"
                     /locus_tag="VHZ56_05455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system beta propeller repeat protein
                     TolB"
                     /protein_id="HEX4297449.1"
                     /translation="MHAITRRHLLKLGLASGALVAMANSPAQALVSIVVSGGNFTPLP
                     IAIPDFASSDPSFGKEIADIVRADLTRSGLFAPIDPATFGNKVGDVNATPVFADWRAL
                     NVDALVMGQVERGGQIQSAVRVWDTAAAQQVVGNTYNADPQSDRRIAHIVADAIYASL
                     AGDSGYFDSQVVFIAESGPKANRKKQLAIMDQDGQNIQMLSSGDSLTLGPEMSDDRSM
                     ITYTSYEDGNPQVYVAQLGGKSRKLINNAPMSFASHFSPDGSAVAFSVSNNGVTNLYS
                     AGVSGSKPVQLTSGAEIDTAPSYSPDGSKIVFESDRGGQPQIYIMSAGGGGAQRISYG
                     DGEYSTPTWSPKGDLIAFTRQANGNFQIGTMKPDGTGERILVDSFHAEGPSFCPNGRV
                     IMFFRDPGGDSGPGLWTVDIWGRNEQQIKMDIFASDPNWCTLRS"
     gene            5772..6419
                     /locus_tag="VHZ56_05460"
     CDS             5772..6419
                     /locus_tag="VHZ56_05460"
                     /EC_number="3.2.2.16"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006310128.1"
                     /note="Enables the cleavage of the glycosidic bond in both
                     5'-methylthioadenosine and S-adenosylhomocysteine; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HEX4297450.1"
                     /translation="MPFVKRRPGVADILYVMATEFEYGPQLRSRITPLITGVGPIEAA
                     IAVTETLTRLSVEDKLPLLLVSLGSAGSAQLEQCGLYQASEVSWRDMDASAIGFEPGV
                     VPFLDQPASLGLGPFVPDIPMATLSTGSDIVSGSGYDAISEHMVDMETYAVVRAASRF
                     GLPLIALRGISDGDRELGALTDWTHYLGIIDVKLADAVDRLEAAVAEGTLEWTAG"
     gene            6746..7228
                     /gene="pal"
                     /locus_tag="VHZ56_05465"
     CDS             6746..7228
                     /gene="pal"
                     /locus_tag="VHZ56_05465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HEX4297451.1"
                     /translation="MRSTTPIFGLLRAAALVVLVVALAACGRNGTGVGNLGPGGGAPG
                     SQQEFLVTVGDRVFFDTDSSELTPTSTSTLDKQAVWLNHYSNYKILIEGHADERGTRE
                     YNIALGARRASVVVAYLESKGIDASRITSKSYGKERPVAICDDISCWSQNRRAVTVLQ
                     "
     gene            7379..8476
                     /gene="ybgF"
                     /locus_tag="VHZ56_05470"
     CDS             7379..8476
                     /gene="ybgF"
                     /locus_tag="VHZ56_05470"
                     /inference="COORDINATES: protein motif:HMM:TIGR02795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system protein YbgF"
                     /protein_id="HEX4297452.1"
                     /translation="MRPTLKTGAVRGLATFAAVLCASVLLPGLALAGGPGLALTNNLA
                     PQVLAASPLPPADVVDSRILVADSQSDAQVTVRVQALEDAVRTLTGQVDGLQFQLTQM
                     QELIQKMQQDDEFRFEQLEGGAGKKSSAATHSGGVTPSGALPQGQAGAEQSTDNPPAD
                     APAADAGNSGDATPPPADATNNADGNSTATVNDGLGQSQDPLLKGGSPTLGAEPGNGN
                     GQPLNLNLDATSSQALSNGDSAAQYKAGYDAILRGDYPFAEDQFRQFIALYPKDPQAP
                     DATNWLGEALLQRQAYDDAADVLLTGFQNYEHSARAPDLLLKLGIALAGAGQQDTACR
                     TFAEVLKRYPKQPQAFLQRLSDEKTKAQCPA"
     gene            8464..9468
                     /gene="tilS"
                     /locus_tag="VHZ56_05475"
     CDS             8464..9468
                     /gene="tilS"
                     /locus_tag="VHZ56_05475"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEX4297453.1"
                     /translation="MPGLTAPDLERLFRPAADLGTLGLAVSGGPDSLALMLLARQWAS
                     SGERPRLVVYSVDHGLRPEAAGEAAMVREVATRLGLAARVLRWTGDKPETGVQAAARK
                     ARYQLMADAMVADGAELLATGHHLGDQAETVLMRLAHGSGVEGLRGMDRLATVEGCRI
                     FRPLLGVDPEDLGAVVDEAGLVPASDPSNRDRHYERARWRELRPALDELGLDMRRLGM
                     FATRMADADALIAAETEKAWTVLVHVSADGAELPHAGLATLPRAVAVRLLGRVLRVVG
                     DDRRAHGLGAVESLHERLLERTPLRPATLHGCVIASDGLTVSVRREGARRIASLLTAD
                     "
     gene            9605..11536
                     /gene="ftsH"
                     /locus_tag="VHZ56_05480"
     CDS             9605..11536
                     /gene="ftsH"
                     /locus_tag="VHZ56_05480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEX4297454.1"
                     /translation="MNVNFRNFAIWLVILFMLMGLFQVFQSSTRSMSVADKSYSQFIS
                     DVDAGSVTSVTIIDDTVQGVLKDGSRFETVIPPNTDIVTRLEDRGVQITAKAPDSSPF
                     WSILLSSWLPFLVIIGVWFFFIRQMQGGGRGGAMGFGKSRAKLLTETHGKVTFEDVAG
                     VDEAKQDLEEIVEFLKDPGKFQRLGGRIPRGVLLVGPPGTGKTLIARAVAGEANVPFF
                     TISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGGGNDERE
                     QTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDVQGREKI
                     LKVHVRKVPLAPDVDLKILARGTPGFSGADLMNLVNEGALLAARRNKRFVTMAEFEDA
                     KDKLMMGAERRTLSLTEEDKKLTAYHEAGHALLAIKMDASDPIHKATIVPRGRALGMV
                     MRLPERDQVSLTRRKAYADLAVAMGGRVAEEEIFGYEKVTSGASADIKMATGLARAMA
                     TEWGMSDKLGPLLYGDNQDEVFLGRSMMQRQVHMSDETQQVVDAEVKRFVEEGYTTAQ
                     TVIRENIGQLHAIAQALLEYETLTGDEIRNLLDGNPPVRADGLDTTPKSTGVPTAGKP
                     VRKRPDAEPDGTPEPLPGA"
     gene            11672..13015
                     /gene="glmM"
                     /locus_tag="VHZ56_05485"
     CDS             11672..13015
                     /gene="glmM"
                     /locus_tag="VHZ56_05485"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEX4297455.1"
                     /translation="MARKYFGTDGIRGLANGEKLTPELALKVGMAAGLKFVHGEHRNR
                     VVIGKDTRRSGYMIESALTAGFTAVGMDVYLLGPMPTPAVAMLTRSLRADLGVMISAS
                     HNPYDDNGIKLFRPDGYKLSDDVELAIEDLIEGDVYGQLSKGREIGRAHRDEAAQTRY
                     IEYAKRTLPKNIDLSGLRVVIDCANGAAYKVAPVALWELGAEVFSIGVEPDGFNINDK
                     VGSTAPEALRSKVKEMRADIGIALDGDADRVIIVDEHGEVVDGDQLMAVIAQSWHARG
                     SLRGGGIVATVMSNLGLERYLEQLGLGLERTQVGDRYVLESMRARGFNVGGEQSGHII
                     LSDFTTTGDGLVAALQLLAVVKEAGLRVSEVCRRFEKVPQKLTSVRYRQGRPLDNKLV
                     VQVIAESRDRLGKGGRLVIRESGTEPVIRVMAESDDASLVDAVVDQIAMTIKQVA"
     gene            13199..13891
                     /locus_tag="VHZ56_05490"
     CDS             13199..13891
                     /locus_tag="VHZ56_05490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297456.1"
                     /translation="MRILMAALLIALGALFGAPAMAADLPQYPQVQVPEVDYGLNGSF
                     YLRGSAGLNVLWTQEHVDTTGCTCLPPTAAGFGYSLGAGFGYETGSGLRVDGTLDYIS
                     NNGLTDGTNTLHLRSTVALANVYYDFPFSGGGSAQGGWGAYVGGGVGGAYNMTHISPT
                     NGTLPDGATWSPAAAAMAGVTYDMGSWVADVGYRLIYMPTITNDAKAMPSYYLNGNTI
                     SEIRGTIRYRFQ"
     gene            complement(13958..15100)
                     /locus_tag="VHZ56_05495"
     CDS             complement(13958..15100)
                     /locus_tag="VHZ56_05495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crosslink repair DNA glycosylase YcaQ family
                     protein"
                     /protein_id="HEX4297457.1"
                     /translation="MPVKPRSISLAEARRIWLAAQRLDTLEPFGAGPEATRLAIEHLG
                     YVQIDTINVIERSHHHILFSRIPAYRRSDLRQAQTLDKTVFEYWTHALAYVPVRDFRF
                     FWPSMKAERADPSHWYADADAGAVLRLARQIRRDGPVSIRDIDEELVEKVHPWASRKP
                     SKRVLQRGFYEGRFAISERIGMVKTYELMERHFGWTRAPKGATARETVDYLLDRALRS
                     QGLISGPSAMYPKLRFTPEMQARIDGRVRRRELVPVAIEGETSPHYATPQALDEIPAE
                     REPLVHILSPFDPLVIQRRRLKLFFGYDHLFEAYVPKAKRQLGYFVLPVLVGDAIVAA
                     LDLKADRAARRLLIQSWHWLDGSQPRSHKRLIEAALDRFAAFQFGD"
     gene            15212..15463
                     /locus_tag="VHZ56_05500"
     CDS             15212..15463
                     /locus_tag="VHZ56_05500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297458.1"
                     /translation="MTTAIFIVIYARNKWWIDLNGKSQGPYLARESAEAEAIKHATAL
                     ARAGKRSEVQVAVPGEKNRIVYQSSDPGMLGRAAALINH"
     gene            complement(15477..>16419)
                     /locus_tag="VHZ56_05505"
     CDS             complement(15477..>16419)
                     /locus_tag="VHZ56_05505"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007602902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HEX4297459.1"
                     /translation="VLFRTSSHSGPLEIELTRRNIPFVKYGGLKFLDAAHVKDMLALL
                     RWAENPRDRVAGFRILQLLPGIGPAVAGRVLDAMLEMPRPFATLAGMPAPARSEGWQE
                     LVTTLADLAAARDWPAAFSRARSWYEPVLAETHDDAPVRVLDLLQLEQIASGYPSRER
                     FLTELTLDPPDATSDQSGPGTKDEDYLILSTIHSAKGQEWRSVHVLNTVDGCIPSDLG
                     TGSTHELEEERRLLYVAMTRARDELHLIVPQRFFVTQQARLGDRHLYAQRSRFITRAM
                     LPLYDDILWPALQPLATLTASRGNVDLRAQMRTMWAK"
BASE COUNT         2765 a         5313 c         5685 g         2656 t
ORIGIN      
        1 cagcgccagg cggcgctcga ccatgtgctg ttcgtcggcc cgccggggct cggcaagacg
       61 acgctggcgc agatcgtggc gcgcgagctc ggcgtcggct tccgcgccac ctcgggtccg
      121 gtgatcgcca aggccggcga cctcgcggcg ctgctcacca atctggagca gcgcgacgtc
      181 ctgttcatcg acgaaatcca ccggctcaat ccggcgatcg aggaaatcct ctatccggcg
      241 atggaggact accagctcga tctgatcatc ggcgaggggc cggcggcgcg ttcggtgcgc
      301 atcgacctgg cgaagttcac gctgatcggg gcgacgacgc gcgccgggct gctgacgacg
      361 ccgctgcgcg atcgcttcgg cattccggtg cgcctcaatt tctattcgcc ggaggaactg
      421 gtgcagatcg tcgaacgcgg tgcccggctg ctcggcgtcg gcatgacgtc cgacggcgcc
      481 ctggagatcg cgcgccggtc gcgcggcacg ccgcggatcg ccggtcggct gctgcggcgg
      541 gtgaccgatt ttgcgctggt cgacggggcc aaatcgatca gccggacgat tgccgacaag
      601 gcgctgctgc ggctcgaggt ggacgcacgc ggcctcgacg cgctcgaccg ccgctacctc
      661 aagaccatag cggagttcta ctcgggcggc ccggtcggcg tcgagaccat cgcggcggcg
      721 ctgagcgagc cgcgcgacgc cctcgaggag atcgtcgagc cgtatttgat ccagcagggc
      781 ttcatccagc gcacgccgcg cggccgcatg ctcacggccc tggctttcca gcatctgggc
      841 ctgaccgcgc cgcagggatt tgtcggcatg cagaccagcc tgttcgaaga gccggagggc
      901 gaatgagcgg gcgcatcccg tggctgacgc tgggcgtgtt cgggctcacc gccgtggtga
      961 ccggggcgat gctgctgcgg cccgaagtcg gtgttgcgct cgaacgcgac cccgcgatgc
     1021 tgcacggcga gtggtggcgg ttcgctacca cctggctggt cgagaccgac ggctggtcgc
     1081 agatcgcgat caacggcatc ggcctcctgg tcttcggcgt gctggtcgag cttcggctgg
     1141 gccgcgcgtg gtggaccgtt ggctacgtag tggccgggct tgcgggcgag atcgcgggcc
     1201 tcgtctggca gccggtcggc ggcggcaatt cggtggcgat ctgcgggctc atcgggctgt
     1261 tttcgatcga ccagctggcg cggccggcgg gtgggccgcc gcgcgccctg agcgccgtgg
     1321 tgtggctggc gatcgggctc tggctggtga cgcggcacga cattcacggc gcggcgctga
     1381 tggcgggatt cgtagtggcc ggcgtggcct atttcaccgg cgcggcgcgg cagcggctgg
     1441 ccgcggcatg agtgtcccgc atcgcctcga ggtccgggtc tattacgaag acaccgattt
     1501 ttccggtgcc gtctatcacg cggcgtatct gcattttttc gagcgcgggc ggaccgagct
     1561 gttgcgggcg gcggggatcc accactccga actggcccgc gacgggatcg cctttgcggt
     1621 gcggtcgatg gagatcgagt ttccgcgcgc cgcccatatc gacgacctgc tggtggtcga
     1681 cacggcggtg ggcgagatca gcggcgcgcg cttcaccctg gagcagtcga tcgaacgcgg
     1741 cgacgaactg atcgcccggg cgagggtggt cgcggtagcg gtgcgggccg gccgggcgac
     1801 gcggctgccg cggtcggtgc tggcggcctt cgggccgggg cgctgacgcc gggtgcgacg
     1861 gtttgcgcgc ctcgccacgg cccggatggc ggtgacagaa tcgaagtgtt aactgcttgt
     1921 tgaccataac tgggacggga cgcccgggtg tcccgcaaag cgccggaatt cggggctttc
     1981 tcttaaaatt gacaaattcc gaccgcatcg gaatcccctg aatcgtcgcg ttgccgtctg
     2041 gcgatgctgc gggggccggt ccggcgggcc gaggcgaagg gacgttgcat ggaccgcagg
     2101 gacactcccc cggaagggtt ggaccgggcg acgcgctgga gtgccatgtt cagggcgccg
     2161 ctgctggccg cgctggcggt tgcgacgatc aatctggcgt tgccggcgct ggcccaggat
     2221 gtttcgtcga gtgccagtgt catcaacgac gtggttgcgg ggccggtggc gccggcgccg
     2281 aacttctccc tgctcgggct gttcctgcag gccgactgga tcgtcaagat cgtcatgctc
     2341 gggctgctcg cggcgtcggt ctggtgctgg gcgatcatca tcgacaagtc gatgctgtat
     2401 ggtcgcgcca accggcagat gaacgccttc gagcgggtgt tctggtcggg ccagtcgctc
     2461 gaggaactct accagcagat gcaggagcgc tcgagcgtcg ggctcggggc catcttcatt
     2521 gccgccatga aggagtggaa gcgcagccac gagcagaatg cagcgtcgtt cctcggcgtg
     2581 caggcgcggc tcgagaaggt cctcgacgtc gccatctcgc gcgagagcga cgggctggag
     2641 cggcgccttg ggttcctcgc gacggtggcg tcggcgtcgc ccttcatcgg cctttttggc
     2701 acggtatggg gcatcatgaa ctcgttcacc tcgatcgcgg cgtcgaagag cacgaacctt
     2761 gcggtggtgg cccccggcat cgccgaggcg ttgttcgcca ccgcgctcgg cctgcttgcg
     2821 gcgatcccgg cgacgattgc ctacaacaag ctctccgccg attcgaacaa gctgatcagc
     2881 cggctcgagg catttgccga cgagttcgcg accatcctgt cgcggcagct cgaagcgcgg
     2941 ggccgctgag ccatggccat ggccatcgca caaggcgggg gcggcgggcg acgcagccgg
     3001 cggcgtgcca gcaagcggcc gatgtccgac atcaacgtca ccccgatggt cgacgtgatg
     3061 ctggtgctgc tcatcgtgtt catggtggcg gcgccgctgc tgacggtggg cgtgccgatc
     3121 gacctgccgc agaccaaggc aaaggagctc aacaccgaga gcaagccgat caccgtttcg
     3181 gtgacgccgg cgggtgatct cttcctcggc gacaccccgg tgcagatcga cgggctcatc
     3241 gacgccatca acgcccaggc caccgacagc accgaccagc gcatctacgt ccgcggcgac
     3301 cagaccgcca actacggcgc ggtgatgaag gtgatgggcg tgctgtcggc cggcggctac
     3361 tccaagatcg gcctgatcac ggcgcaagac gaggtcaagt gagggcgatg aagaccggtg
     3421 tcaccacctc ggtcatcgcc cacgccgcgc tgctgatcgt cgcgatcgtc gggctggggt
     3481 cggcccggcc ggtcgagccc gaggcggtcg aatcgatcgc cgtcgacctg gtgccgattt
     3541 ccgatgtgac caacatccgg gccggctcgc tcgacagcaa agtcgtgcag accgacacgc
     3601 ctgccatcgt cgaggccagc aagccggcgg agctggcgca gccgaccggc aatacggccg
     3661 aagaccagcc gacgccggag gcgacgagca agacgacgcc ggcgccggtc gagaatacgg
     3721 cgccgaagcc ggcgcccgat ccggctcccg agaaagcccc cgatccggtc aaggacccga
     3781 cgccgccgac tccggccccg gtcgccgcgc ccgatccggc gccgaccccg gtgcagccgc
     3841 aacagcagca ggaagtgacg accgccaccg acgatacgcc ggccgacaat gtcgcgccga
     3901 cgccagcgac acgaccggtg cagctgcaga aggcgctggt caaggatccg cccaaggaca
     3961 ccaaggtcgc gaccgtcatc ccgaagaaga ccaccaccgc ggcgcagccc gaccagagca
     4021 agacgccgcc cgacccgcag gcgaagaccg ccgacaaggt ggccgagctg ctcaacgcca
     4081 tggattcgcg cggcgcgacc accggcgatg gcggctcccc gacgctgggc aagaccaccg
     4141 gcaagtcggc gacgctgacg cagagccagc tcgatgggct ggtggcgcag atcaagaact
     4201 gcatgaacgt gccggccggc gcggccgatg ccggcgtcac agcggaactg catttcatcc
     4261 tcgatgccag cggcaacgtc acgcagatgc cggacatcct cagcgatact tcgacgccgc
     4321 tggcccgcgc cctcgcttcg gcggcgcagc gcgcggtgat gcgctgcggt ccctacgcca
     4381 tggcggtcaa ccaggaggtc caggcgacct tcgatccgcg cgatctcacc tgagcgcgcc
     4441 ccatttcaag gagacgatca tgcacgcaat cacccggcga cacctgctga agctcggcct
     4501 cgccagcggc gcgctggtgg ccatggccaa ttcgccggcc caggcgctgg tcagcatcgt
     4561 agtgtcgggc ggaaacttca cgccgctgcc gatcgcgatt cccgacttcg cgtcgtccga
     4621 ccccagcttc ggcaaggaaa tcgccgacat tgtgcgcgcc gacctcacgc gctccgggct
     4681 gtttgcgccg atcgatcccg cgacgttcgg caacaaggtc ggcgacgtca acgccacgcc
     4741 ggtgttcgcc gactggcggg cgctcaacgt cgacgcgctg gtgatggggc aggtggagcg
     4801 cggtggccag atccagtcgg cggttcgcgt ctgggacacc gctgcggcgc agcaggtggt
     4861 cggcaacacc tacaatgccg atccgcagag cgaccggcgc atcgcgcaca tcgtggccga
     4921 cgcgatctat gcgtcgctcg cgggcgacag cggctatttc gactcgcagg tggtgttcat
     4981 cgccgaaagc ggccccaagg cgaaccgcaa gaagcagctg gcgatcatgg accaggacgg
     5041 ccagaacatt cagatgctga gctctggcga ttccctgacg ctggggccgg agatgagcga
     5101 cgaccgctcg atgatcacct acaccagcta cgaggacggc aacccgcagg tgtatgtcgc
     5161 gcagctcggc ggcaagtcgc gcaagctcat caacaatgcg ccgatgtcgt tcgcctcgca
     5221 tttctccccg gacggatctg ccgtcgcctt ctcggtgtcg aacaacgggg tgaccaacct
     5281 ctattcggcc ggcgtcagcg gctcgaagcc ggtgcagctg acctcgggcg ccgagatcga
     5341 cacagcgccg tcctattcgc cggatggcag caagatcgtg ttcgagtccg atcgcggcgg
     5401 acagccgcag atctacatca tgagtgccgg cggcggcggg gcgcagcgca tctcgtatgg
     5461 cgacggcgag tactcgaccc cgacatggtc gcccaagggc gacctgatcg ccttcacccg
     5521 gcaggccaac ggcaatttcc agatcggcac gatgaagccg gacggcaccg gcgagcgcat
     5581 cctggtcgac agcttccatg ccgaggggcc gagcttctgc ccgaacgggc gggtgatcat
     5641 gttcttccgc gatccgggtg gcgactccgg accggggctg tggacggtcg acatctgggg
     5701 ccgcaacgag cagcagatca agatggacat cttcgcgtcg gaccccaact ggtgcacgct
     5761 caggagctag aatgccgttc gtgaaacgac gtccgggggt tgccgacatc ctctacgtga
     5821 tggcgacgga gttcgagtac gggccgcagc tgaggagccg gatcacgccc ctgatcaccg
     5881 gtgtcggacc aatcgaggcg gcgatcgcgg tgaccgagac gctgacccgg ctcagcgtcg
     5941 aggacaagct cccgctgctg ctggtctcgc tcggctcggc cggctcggcg cagctcgagc
     6001 aatgcggcct ctaccaggcg agcgaagtca gctggcgcga tatggatgcc agtgccatcg
     6061 gcttcgagcc gggcgtcgtg ccattcctcg atcagccggc gagcctcggg ctcgggccgt
     6121 tcgtgccgga catcccgatg gcgacgctgt cgaccggctc cgacatcgtc tcgggatcgg
     6181 gctacgacgc gatcagcgag cacatggtcg acatggaaac ctacgccgtg gtgcgcgccg
     6241 ccagccgctt cggcctgccg ctgatcgcgc tgcgcggcat ctccgacggc gatcgcgagc
     6301 tcggcgcgct gaccgactgg acgcattacc tcggcatcat cgacgtgaag ctggccgacg
     6361 cggtcgaccg gctcgaggcg gcagtggccg agggcacgct ggagtggact gcaggctgac
     6421 tgccgcgtcg ggcccaactc gctcgaagtg ttggcgttct tcaaccagga cgaaggggca
     6481 gcgcgtccaa ccagggccgg ctgcgcaatc tcgccgcgac ccagcgggaa gtcaccgcga
     6541 cgagcgtcca caacccgttc cgcagccggc ggcggtcgcg gtcaaatcct ggggcgttgt
     6601 ggcctgtcgg caacacggcc gaaaaggccg gtttccgcca catttgagcc gcgttgaccc
     6661 gagattaacc aagccggcca actcggcctt aagataacgc cgagtaaaaa gcggtttcca
     6721 aatcttcttc aggagagcaa cccggatgcg ttccacaacg cccattttcg gacttttgcg
     6781 cgccgccgca ctggtcgttc tcgttgtcgc gctggccgcc tgcggtcgca atggcaccgg
     6841 cgtcggcaat ctcggacccg gtggcggtgc cccgggcagc cagcaggaat tcctggtgac
     6901 ggtcggcgac cgcgtgttct tcgacaccga ttcgtccgag ctcaccccga cgtcgacgtc
     6961 gacgctcgac aagcaggcgg tgtggctcaa ccattattcc aactacaaga tcctgatcga
     7021 gggccatgcc gacgagcgcg gcacccgcga atacaacatc gcgctgggcg cacgccgcgc
     7081 ctcggtggtc gtcgcctatc tcgagagcaa gggcatcgac gcgtcgcgca tcacctcgaa
     7141 atcctacggc aaagaaaggc cggtcgcgat ctgcgacgat atttcgtgct ggtcacaaaa
     7201 ccgccgcgct gtgacggtcc ttcaatgatt gcagtgacgc gttagcgtca atgcggaggc
     7261 ataagcgccg ggtgctcgcg ttcttgagcc ccggcgcttt ctttttgtcg aaattgccgc
     7321 gtaggtgcga gaccgtgttt tcggctcgcg tcttgaccaa agttcatgga gattgatcgt
     7381 gcgtccaacc ctcaagacag gggcggtgcg ggggctcgca accttcgctg ccgttctgtg
     7441 tgcgagcgtg ctgctgccgg gcctggcgct cgctggcggc ccgggcctcg ccctcaccaa
     7501 caatctggcg ccgcaggtgc tggcggcctc gccgctgccg cctgccgatg tcgtcgacag
     7561 ccggatcctc gtcgccgatt cacagtcgga tgcgcaagtt accgtgcggg tacaggcact
     7621 tgaggatgcg gtacggacgc tcaccgggca ggtcgacggg ctgcagttcc agctgacgca
     7681 gatgcaggaa ctgatccaga agatgcagca ggacgacgaa ttccgcttcg agcaactgga
     7741 aggcggtgcc ggaaaaaaaa gtagtgcggc gacccattcc ggaggcgtga cgccatccgg
     7801 ggcgttgccg cagggccagg caggggccga gcagagcacc gataatccgc cggccgacgc
     7861 gccggccgcg gacgcaggca acagcggcga tgccacgcca ccgccggcgg acgccaccaa
     7921 caatgccgac ggcaacagca ccgccacggt caacgatggg ctgggccagt cacaggatcc
     7981 gctgctaaag ggcggcagcc cgacgcttgg cgccgagcca ggcaacggca atggccagcc
     8041 gctcaacctc aatctcgatg cgaccagcag ccaggcgctg tcgaacggcg actcggcggc
     8101 gcagtacaag gccggctacg acgcgatcct gcgcggcgac tacccgtttg ccgaggacca
     8161 gttccggcag ttcatcgcgc tctatcccaa ggatccgcag gcgccggacg ccaccaactg
     8221 gctgggcgag gcgctgctgc agcggcaggc gtacgacgat gcggccgatg tgctgctgac
     8281 ggggttccag aattacgaac attcggcgcg ggcgccggac ctgctgctca agctggggat
     8341 cgcgctcgcc ggcgcgggcc agcaggacac tgcgtgccgg acctttgcgg aggtgctcaa
     8401 gcgctatccc aagcagccgc aggcattcct gcagcgactg agcgacgaga aaacgaaagc
     8461 gcaatgcccg gcctgaccgc gcccgacctc gagcggctgt tccggccggc cgctgatctg
     8521 ggaacgctcg gtctggcggt cagcggcgga ccggattcac tggcactgat gctgctggcg
     8581 cggcaatggg cgtcgagcgg agagcgaccg cggctggtgg tctattcggt ggatcacggg
     8641 ttgcggccgg aagcagccgg ggaagctgcc atggtgcgcg aggttgcgac acgccttggg
     8701 ctcgcggcgc gggtgctgcg ctggaccggc gacaagccgg agaccggggt gcaggcggcg
     8761 gcgcgcaagg cgcggtacca gttgatggct gacgccatgg tggccgacgg ggccgaactt
     8821 cttgccaccg ggcaccattt gggcgaccag gccgagacgg tgctgatgcg gctcgcccac
     8881 ggcagcggtg tcgagggcct gcgcggtatg gaccgtctgg cgactgtcga agggtgccgt
     8941 atcttccggc cgttgctggg cgtcgacccc gaggatttgg gcgcggtggt cgacgaggcc
     9001 ggcctcgtcc ccgccagcga tccgagcaat cgcgaccggc actatgagcg ggcgcggtgg
     9061 cgggaattgc ggccggcgct ggacgaactc ggcctcgata tgcgccggct cggcatgttc
     9121 gcgacccgga tggccgacgc cgacgcgctg atcgcagcgg aaaccgaaaa agcctggacc
     9181 gtgctggtgc acgtttcggc cgatggcgcc gagctgccgc atgcggggct cgcgaccttg
     9241 ccgcgagccg ttgcggtgcg cctgctcggc agggtgctgc gggtggtcgg ggatgaccgc
     9301 cgggcgcacg ggctcggcgc ggtcgaaagc ctgcacgagc gactgctcga gcgtacgccg
     9361 ctccggccgg caaccctcca cggctgcgtc atcgccagcg acgggctcac cgtctcggtg
     9421 cgccgcgagg gggcgcggcg gattgcgagt ctgctcacgg ccgattaacc gctgagggcc
     9481 cgaaaactgg actttccggg cgatgcggcg caccctcatg cccttgtaac gccttagtgc
     9541 ggggcttatc tttgcccgaa catccggcgt cctcccccgg gccggtgatc caggatcagg
     9601 attgatgaac gtcaatttcc gcaacttcgc tatctggctc gtcatactct tcatgctgat
     9661 gggcctgttc caggtgttcc aatcctcgac ccggtcgatg tcggttgcgg acaagagcta
     9721 cagccaattc atcagcgacg tggacgccgg atcggtaacc tcggtgacca tcatcgacga
     9781 caccgtgcag ggcgtgctca aggacggctc gcggttcgag accgtgatcc cacccaacac
     9841 cgatatcgtt acccggttgg aagaccgcgg cgtgcagatc acggcgaagg cgcccgattc
     9901 gagcccgttc tggtcgatcc tgctgtccag ctggttgccg ttcctcgtga tcatcggcgt
     9961 gtggttcttc ttcatccgcc agatgcaggg cggcgggcgc ggcggcgcga tgggctttgg
    10021 caagtcgcgc gcaaaactcc tcaccgagac gcacggcaag gtgacgttcg aggacgtcgc
    10081 cggtgtcgat gaggcgaagc aggatctgga ggagatcgtc gagttcctca aggaccccgg
    10141 caagttccag cggctcggtg gtcgcatccc gcgcggcgtg ctgctggtcg gcccgccggg
    10201 gaccggcaag acgctgattg cgcgtgccgt cgccggcgag gcgaacgtgc cgttcttcac
    10261 catctccggt tccgacttcg tcgagatgtt cgtgggcgtc ggcgccagcc gcgtgcgcga
    10321 catgttcgag caggccaaga agaacgcgcc gtgcatcatc ttcatcgatg agatcgacgc
    10381 cgtcggccgg caccgtggcg ccggcctcgg cggcggcaac gacgagcgcg agcagaccct
    10441 caaccagctg ctggtcgaga tggatggctt cgaggcgaac gagggcatca tcctcatcgc
    10501 tgcgaccaac cgtcccgacg tgctcgatcc ggcgctgctg cgcccgggtc gtttcgaccg
    10561 gcaggtcgtc gtccccaatc ccgacgtgca gggtcgcgag aagatcctca aggtgcacgt
    10621 ccgcaaggtg ccgctggcgc ccgacgtgga cctcaagatt ctcgcccgcg ggacgcctgg
    10681 cttctccggc gccgacctga tgaacctcgt caacgagggc gcactgctgg cggcgcggcg
    10741 caacaagcgc ttcgtcacca tggcggagtt cgaagacgcc aaggacaagc tgatgatggg
    10801 tgccgagcgc cgcaccctca gcctgaccga ggaagacaag aagctcaccg cctatcacga
    10861 ggccggccac gcgctgctgg cgatcaagat ggacgcctcc gatccgatcc ataaggcgac
    10921 gattgtcccg cgcggccggg cccttggcat ggtgatgcgc ctgccggagc gcgaccaggt
    10981 gtcgctgacg cgccgcaagg cttacgccga cctcgccgtg gccatgggtg gccgcgtcgc
    11041 cgaagaggaa atcttcggtt acgagaaggt gacctcgggc gcttccgccg acatcaagat
    11101 ggcaacgggt ctcgcccgcg ccatggcgac cgagtggggc atgtccgaca agcttgggcc
    11161 gctgctctac ggcgacaacc aggacgaggt gttcctcggc cgctcgatga tgcagcggca
    11221 ggtgcacatg tcggacgaga cgcagcaggt cgtcgacgcc gaggtgaagc gcttcgtcga
    11281 agagggctac accaccgcgc agacggtgat ccgcgagaac atcggccagc ttcacgccat
    11341 tgcgcaggcg ctgctcgagt acgagacgct gaccggcgac gagattcgca atctgctcga
    11401 cggcaatccg ccggtgcgcg cggacggtct cgatacgacg ccgaaatcga ccggcgtgcc
    11461 aaccgccggc aagccggtgc gcaagcgccc ggacgccgag ccggacggga ctccggagcc
    11521 cctgccgggc gcctgagcct tcagcaatcc cacgaggccg ccttcgggcg gcctctttgt
    11581 ttgcggcaag tgttaaccgg tcaaatgccg gggattccga ttgccgggca aatcaggcta
    11641 tgatccggga atattgcggg gagtattggc gatggcgcgc aagtatttcg ggaccgatgg
    11701 catccgtggc ctcgccaatg gcgagaagct gacgccggag cttgcgctca aggtcggcat
    11761 ggcggccggc ctgaagttcg tccatggcga gcaccgcaac cgggtggtga tcggcaagga
    11821 cacgcggcgg tcgggctaca tgatcgagag cgcattgacc gccggcttca cagcagtggg
    11881 gatggatgtt tacctcctcg ggccgatgcc gaccccggcc gtggccatgc tgacgcgttc
    11941 gctgcgtgcc gacctcggcg tgatgatttc ggcttcgcac aatccctatg acgacaacgg
    12001 catcaagctg ttccggccgg atggctacaa gctcagcgac gacgtcgagc tggccatcga
    12061 ggacctgatc gagggcgatg tctatggcca gctcagcaag ggccgggaga tcgggcgggc
    12121 gcatcgcgac gaggcggcgc agactcgcta catcgaatat gccaagcgga ccctccccaa
    12181 gaacatcgat ctatccggac tgcgggtggt gatcgactgc gccaatggcg ctgcctacaa
    12241 ggtggcgccg gtcgccctgt gggagctggg ggccgaggtg ttttccatcg gcgtcgagcc
    12301 ggacggcttc aatatcaacg acaaggtcgg ctccaccgct cccgaagcgc tgcgctccaa
    12361 ggtaaaggag atgcgcgccg atatcggcat cgcgcttgat ggcgatgccg atcgggtgat
    12421 catcgtcgac gagcacggcg aggtggtcga cggcgaccag ctgatggcgg tgatcgcgca
    12481 gtcgtggcac gcgcgcggca gcctcagggg tggcggcatt gtcgccacgg tgatgagcaa
    12541 tctcgggctc gagcgctatc tggagcagct cggcctgggg ctcgagcgta cccaggtggg
    12601 cgaccgctac gtgctcgaat cgatgcgggc gcgcggcttc aacgtcggcg gcgagcagtc
    12661 ggggcacatc atcctgtccg acttcaccac gacgggcgat gggctggtgg cggcgctgca
    12721 gctgctggcg gtggtcaagg aagccgggct gcgcgtctcc gaggtgtgcc ggcggttcga
    12781 gaaagtgccg cagaagctca ccagcgtgcg ctaccggcag gggcgaccgc tcgacaacaa
    12841 gctggtggtg caggtcatcg ccgaaagccg cgacaggctc ggcaagggtg gccggctggt
    12901 gatccgcgag agcggcaccg aaccagtgat cagggtcatg gccgagagcg acgatgccag
    12961 cctggtcgat gcggtcgtcg atcagatcgc gatgacgatc aagcaggtcg cataaccggt
    13021 gaagccaggg gcgcttgatt ctaggacaat gttctagatg cttcgccgtg gcgaaccaaa
    13081 gagtgcgtta acctcttctt agggttaccg gttagggtta agcgtgcttt aaggaaactg
    13141 gtctagcctt ggctcttatc gacgggtgtc gtcgtgatga actcaaggat tgtgtgacat
    13201 gcgtattcta atggcggcgc tgctgatagc gcttggcgcc ctgttcggcg ccccggccat
    13261 ggcggccgat cttccccaat acccgcaggt gcaggttccc gaagtcgact acggtctcaa
    13321 cggttcgttc tatttgcgcg gctccgccgg gctgaacgtg ctgtggactc aggagcacgt
    13381 ggacaccacc gggtgtacct gccttccgcc caccgcggcc ggcttcggct actccctcgg
    13441 cgccggcttc ggctacgaga cggggtcggg cctgcgcgtc gacggcacgc tcgactacat
    13501 cagcaacaac gggctgacgg acggcaccaa tacgctgcac ctgcgctcga ccgtggcgct
    13561 ggccaacgtc tactacgact tcccgttctc gggtggcggc tcggcccagg gcggctgggg
    13621 tgcctacgtc ggcggcggcg tcggcggcgc ttacaacatg acgcatatct cgccgaccaa
    13681 tggaacgctg ccggacggcg cgacatggag cccggcggca gcggcgatgg ccggcgtcac
    13741 ctacgacatg ggcagctggg ttgcggacgt cggctaccgc ctgatctaca tgccgacgat
    13801 caccaacgac gccaaggcca tgccgtccta ctacctcaac ggcaacacga tcagcgaaat
    13861 ccgcggcacc atccgctatc gcttccagta gctgatcggt ccagcgacga caccctccgg
    13921 caacggcgtc cttcgggacg ccgttgtcgt ttcggcttca gtcgccgaac tggaacgcgg
    13981 cgaaacggtc gagggcggcc tcgatcagtc gcttatggct gcgcggctgg ctgccgtcga
    14041 gccagtgcca tgactggatg agcagccggc gcgccgcgcg atcggccttg agatcgaggg
    14101 ccgcgacgat ggcatcgccg accagcaccg gcaacacgaa gtagccgagc tgccgctttg
    14161 ccttgggcac ataggcctcg aacaggtggt catagccaaa gaacagcttc agccgccgcc
    14221 gctggatcac cagcggatcg aagggcgaca gaatgtgaac gagcggctcg cgctcggcgg
    14281 gtatctcgtc cagcgcctgc ggcgtcgcat aatgaggcga ggtttcgcct tcgatcgcca
    14341 cgggcaccag ttcgcgcctg cggacccggc cgtcgatccg ggcctgcatt tccggcgtga
    14401 accgcagctt ggggtacatt gccgaggggc cactgatcag tccctgcgag cggagggcgc
    14461 gatccagcag atagtcgaca gtctcccggg cggtggcgcc tttcggtgca cgggtccagc
    14521 cgaaatgccg ctccatcagt tcgtaggtct tgaccatgcc gatgcgctcg gagatggcga
    14581 agcgcccctc gtagaagccg cgctgcagca cgcgcttgct cggcttgcgg ctggcccagg
    14641 ggtggacttt ctcgaccagc tcctcgtcga tgtcgcggat cgacacgggg ccgtcgcggc
    14701 gaatctgccg ggccagcctg aggactgctc cggcatcggc atcggcgtac caatgggagg
    14761 ggtcagcccg ttcggccttc atcgatggcc agaagaaccg gaagtcgcgc accggcacgt
    14821 aggcgagggc atgcgtccag tactcgaaca ccgttttatc gagggtctgc gcctgccgca
    14881 ggtcgctgcg ccgataggcc ggaatgcgac tgaagaggat gtggtggtgc gatcgttcga
    14941 tgacgttgat ggtgtcgatc tgcacgtagc ccaggtgctc gatggcgagg cgcgtcgctt
    15001 ccgggccggc gccgaacggc tcaagcgtat cgagccgttg cgccgccagc cagatgcggc
    15061 gcgcctcggc gagcgagatc gaacgcggct tcacgggcat tgcacggctg cggctctgcc
    15121 aatcttaagc atgcgagtgg aatggcggcg gccggcgggc agggccggcg tatggatgcg
    15181 gtgcggcatc cagtcctggg atcgctcttt catgaccacg gccatcttta tcgtcatcta
    15241 tgcccgcaac aagtggtgga tcgacctcaa cggcaagtcg cagggcccct atctggcccg
    15301 cgagagcgcg gaagccgagg cgatcaagca tgccacggcg ctggcccgcg ccggcaagcg
    15361 cagcgaagtg caggtcgcgg tgcccggcga gaagaaccgc atcgtttacc agagctcgga
    15421 ccccggcatg ctcgggcgtg ctgctgcgct gatcaaccac tgaaccgccg tccccgtcac
    15481 ttcgcccaca tcgtgcgcat ctgcgcccga aggtcgacat tgccgcggct cgcggtgagt
    15541 gtcgcgagcg gctgcagcgc cggccagaga atatcatcat agagcggcag catggcgcgg
    15601 gtgatgaacc ggctgcgctg cgcatagagg tgccggtcgc cgagccttgc ctgctgggtg
    15661 acgaagaagc gctgcggcac gatcaggtgc agctcgtcgc gggcgcgcgt catcgcgacg
    15721 tagagcaagc gccgctcctc ctcgagctca tgggtcgagc cggtgccgag gtctgacggg
    15781 atgcagccgt cgacggtgtt caggacgtga accgaacgcc attcctgacc cttggccgag
    15841 tggatggtcg agaggatgag gtagtcctcg tccttggtgc cggggccgga ttgatcggag
    15901 gtcgcatccg gcggatccag cgtcagctcg gtcaaaaagc gctcacggct gggatagccg
    15961 gaggcgatct gctcgagctg caacaggtcg agcacgcgaa ccggcgcgtc gtcatgtgtt
    16021 tcggccagga ccggctcgta ccatgagcgg gcgcggctga aggcggccgg ccagtcccgg
    16081 gccgcagcaa gatcggcgag cgtggtgacg agttcctgcc aaccttccga gcgggcgggc
    16141 gccggcatgc cggcgagagt cgcgaagggc ctcggcatct cgagcatggc atcgaggacg
    16201 cggccagcca ctgcgggacc gatccccggc agcagctgca ggatgcgaaa gccggccacg
    16261 cggtcgcgcg ggttctccgc ccagcgcaac agcgccagca tgtccttgac gtgggcggcg
    16321 tcgaggaatt tgaggccgcc atacttcacg aacgggatgt tgcggcgggt gagctcgatc
    16381 tcgagcggtc ccgaatgcga tgaggtccgg aacagcacc
//
LOCUS       DATAZA010000214         1887 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1647658, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000214 DATAZA010000000
VERSION     DATAZA010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1887
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1647658"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..459)
                     /locus_tag="VHZ56_05510"
     CDS             complement(<1..459)
                     /locus_tag="VHZ56_05510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreD"
                     /protein_id="HEX4297460.1"
                     /translation="MTALVAVEAGAGLHLQRARGEGRVVAVARDGRTEIAALYQDGCA
                     KIRLPRTHSDALQAVLMNTAGGLTGGDRIDWSAEAAADTRLVLTTPAAERVYRSIGGA
                     AVVRTRLLAQGGAHLDWLPQETILFEGARLDRRLDVDLAEGATLTAVEAVL"
     gene            735..968
                     /locus_tag="VHZ56_05515"
     CDS             735..968
                     /locus_tag="VHZ56_05515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297461.1"
                     /translation="MRASAAVSIAALVAAVMAVPETAQDAGAGSGQDSGWDSDADLLA
                     AANDNDSRVSRFGTEAAHPAALRADGSVGAGEG"
     gene            1231..>1887
                     /locus_tag="VHZ56_05520"
     CDS             1231..>1887
                     /locus_tag="VHZ56_05520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297462.1"
                     /translation="MNLIHKLAVAGVIALVLYPAGAQAGSLLGGLIKTGSDSGNSSQP
                     VSIGSSGGGTSIGLGGSGGVSVNLPGLGGSGGSGGSGGLGGLGLGSGSTGIGGVATVD
                     SGTSSGGGSTVGVTLLGGGGGTIGTNLGGLLGSGGGVSVGLPGLGGVGGLLSGSGTDG
                     TDGTNGTNGTDGTNGSTGGRFFSYGGSGGVALPADMSSRLQALLRVLAAREWIQLAGN
                     R"
BASE COUNT          267 a          633 c          693 g          294 t
ORIGIN      
        1 caggaccgcc tccacggcgg tcagcgtcgc gccttcggca agatcaacgt ccagccggcg
       61 gtccagccgg gcgccctcga acaggatggt ctcctgcggc agccagtcga gatgggcgcc
      121 gccctgcgcc aggaggcgcg tgcggaccac cgcggcgccg ccaatcgagc gatagacccg
      181 ctcggcggcc ggcgtcgtca gcacgagcct ggtgtccgcc gccgcctcgg ccgaccagtc
      241 gatgcggtcg ccgccggtga ggccgccggc cgtgttcatc agcactgcct gcagggcgtc
      301 ggaatgggta cggggcaggc ggatcttggc gcagccgtcc tggtagaggg cggcgatctc
      361 ggtccggcca tcacgcgcga cggccacgac gcggccttcg ccgcgcgccc gctgcaggtg
      421 gaggccggca ccggcctcga cagcgacgag ggctgtcacc gctatacccc cggccgccgg
      481 ccaagcccgg gcagttcgac atttccgccc cggccggcgt gcatgatctg gcggcgatcc
      541 atcggccgat tcgtcggcga tttccgggca agagtccaga cacggcgcga gccaaacggt
      601 gaggttctgt cgccggttgg ccaaaggcgc cgagggctgg ccatggcggt ggcaagcggc
      661 gcaaccaatc ccgcggtcgc cccgttaccc cgaacgatag cgaaccgccg ccaagcgacc
      721 aagggagaca gattgtgaga gccagtgcag cggtttcgat tgcggcgctt gttgccgcgg
      781 tgatggcggt ccccgagacg gcgcaggacg ccggggccgg aagcggacag gattccggct
      841 gggacagcga cgcggacctg cttgccgcag ccaacgacaa cgactccaga gtttctcggt
      901 tcggtaccga ggcggcccat ccggccgcct tgcgcgccga cggttcggtc ggcgctggcg
      961 agggctgacg ctccctcgct ggtgcagccg aagggagcgc gggacctcgg tcccgcgctt
     1021 tccttttgtg cccatgttgt ccgtagttcg cgcaatgggg gaaacgcgcg gctttgccac
     1081 atctcataga acaatgttcg tacgggtccg caaaggcctg gttttccaag gatttgcttt
     1141 gtccttcgcc ttaggttgcc gttaagcggc gcgggccgtt tctgcctgca tgcgccgccc
     1201 atgagaggcg gcaggcaagg gagacgacaa atgaacttga tccacaaact cgccgtggcc
     1261 ggagtgatcg cgctggtgct gtacccggcc ggcgcgcagg ccggctcgct gcttggcggg
     1321 ctcatcaaga ccggcagcga ttccggcaat tcctcgcagc cggtcagcat cggcagcagc
     1381 ggcggcggca cctcgatcgg cctcggcggt tcgggcggcg tatccgtcaa tctgccgggt
     1441 cttggcggct ccggcggctc gggtggttct ggtggcctcg gtggcctggg cctcggatcg
     1501 ggcagcaccg gcattggcgg tgtcgctacc gtcgactccg gcacgtccag cggcggtggc
     1561 tcgacggtcg gggtgacgct gctcggcggc ggcggcggga ccatcggcac gaatctgggc
     1621 ggcctgctcg gatcgggcgg cggggtcagt gtcggcctgc cgggcctcgg tggcgtcggc
     1681 ggcctcctca gcgggagcgg caccgatggg accgacggca cgaacggcac caacgggacc
     1741 gacggcacca atggctcgac cggcgggcgg ttcttcagct atggcgggtc gggcggggtc
     1801 gctctgccgg cagatatgtc gagccggctg caggcgctgc tgcgtgtcct tgccgcgcgc
     1861 gaatggatcc agctcgccgg caaccgc
//
LOCUS       DATAZA010000215         2968 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_372094, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000215 DATAZA010000000
VERSION     DATAZA010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2968
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372094"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..756)
                     /locus_tag="VHZ56_05525"
     CDS             complement(<1..756)
                     /locus_tag="VHZ56_05525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014530153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HEX4297463.1"
                     /translation="MAPRASWKGYIKLSLVSCPVRLYPAVSAGERISFNQLHKETHNR
                     INMKPVDPELGLVERADLVRGYEYEDKQYIIVEDSDLDAVRIESNHTLNIEAFVDADE
                     VDVIYQDAPYYLAPDGAMAEETFAVLRDAMQAANKLAIARLVLSSRERVVTIGARDKG
                     MFVTTLRDPREVRSTAAYFDEIPEIKADPEMLQLAEKLIEQKVTHFDPKRYEDRYETA
                     LMAMIKEKLKGHKPIIAAAPERGNVINLMDALKA"
     gene            complement(773..>2968)
                     /gene="ligD"
                     /locus_tag="VHZ56_05530"
     CDS             complement(773..>2968)
                     /gene="ligD"
                     /locus_tag="VHZ56_05530"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006206462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HEX4297464.1"
                     /translation="GGGPMIVWDTGTWAPMGDPAEGLRTGDFKFRLWGDKLKGGWMLV
                     RLKPKPNEPDGNWLFFKERDPSADAKTDILATRPESVKSGLTIEQLLAADAAAKKNVA
                     PKPKAPGKPAPGRLKGAVKAPMPKSMKPQLAAESDEPVKGEGWLHEIKFDGYRTIALV
                     EAGKVRLLTRTGIDWTDRYGVLADGFAALPVKQAILDGEIVVVDGSGVSHFADLQQAL
                     SDHAGDRLTFFAFDIMYLDGYDLTAARLDARKDLLRDLLAPVVTGSSAIQFSDSFGGA
                     AQVLYDQATEIGLEGIMSKRADAAYLQARSKTWVKTKALKAGDFPIVGYTLSPAAGGI
                     GALALGQWVDGELVYRGKCGTGFSGAELVTILDRLEPLAAGGQALAGMPKDVVPIRPV
                     ITAHVHYTSLTSDNYVRHGVFKGLREPEITAAPTTVKRKRLVSDADLANIWVTNPTRR
                     LFGKSGPTKLDVAIYYAAVGDFMLPHIFGRPVSLVRSPSGQLSDIFFQRHPFTGMPPS
                     IGSFETMSSDEGEIKKFISVEDAKGYLALAQFGVIEFHAWGCHWRENLEKPDRVIFDL
                     DPGEGIKFRQIVEAAFFVKHYLETLSLRPYVKTSGGKGLHVVVPLKPRLDWKQVHAGT
                     GEIAARIAKAAPETFVVNMAKEKRQKRIFIDFHRNYRGATAVAPYSLRARANLPASTP
                     VNWSDLRSIDAPEDLNYSSLPAILNVSGDPWAAMDQDAADFSAALKQPK"
BASE COUNT          470 a          990 c          947 g          561 t
ORIGIN      
        1 cgccttcagc gcatccatga ggttgatgac attgccccgc tcaggcgccg ccgcgatgat
       61 cggcttgtgg cccttgagct tctccttgat catcgccatc agcgccgtct cgtagcgatc
      121 ctcgtagcgc ttcggatcga aatgcgtgac cttttgttcg atcagctttt cggccagctg
      181 cagcatttcg ggatcggcct tgatttcggg gatctcgtcg aaatacgccg ccgtcgagcg
      241 cacctcgcgc ggatcccgca gcgtcgtcac gaacatgccc ttgtcgcgcg cgccgatggt
      301 caccacgcgt tcgcggctcg acagcaccag ccgggcgatc gccagcttgt tggcggcctg
      361 catggcgtcc cgcagcaccg cgaaggtctc ttccgccatc gctccatccg gcgccaggta
      421 atacggcgcg tcctggtaga tcacgtcgac ctcgtcggcg tcgacgaacg cctcgatgtt
      481 gagcgtgtgg ttggattcga tccgcacggc gtcgagatcg ctgtcctcga cgatgatgta
      541 ctgcttgtcc tcgtactcgt agccgcgcac cagatcggcg cgctcgacca gcccgagctc
      601 cggatcgacc ggcttcatgt tgatccggtt gtgggtctcc ttgtgcagct gattgaagct
      661 gatgcgctcg ccggcgctga ccgccggata gagccgcacc gggcagctca cgaggctcag
      721 tttgatgtaa cccttccagc tggctctggg cgccatggcg atctcctacg catcacttcg
      781 gctgcttgag cgcggcactg aagtccgccg catcctgatc catcgccgcc cacggatcgc
      841 cggaaacgtt gaggattgcc ggcaaactag aataattcaa atcttccgga gcgtcgatgg
      901 atcgtaaatc cgaccagtta acaggcgttg acgccggcag attggctcgc gcccggaggc
      961 tgtagggggc gacggccgtg gcaccgcggt agttccggtg gaagtcgatg aagatgcgct
     1021 tttgccgctt ctccttggcc atattgacca cgaaagtctc cggcgccgcc ttggcgatgc
     1081 gggcggcgat ctcgccggtg ccggcgtgca cctgcttcca gtcgagcctg ggcttgagcg
     1141 ggacgacgac gtgcagcccc ttgccgccgg aggtcttcac atatggcctt agggacagcg
     1201 tttcgaggta gtgtttcacg aaaaatgccg cctcgacgat ctgcctgaat ttgatgccct
     1261 cgcccgggtc gagatcgaaa atgacgcggt ccggcttttc gaggttctcc cgccagtggc
     1321 agccccaggc gtggaactcg atcaccccga actgcgccag cgccagatag cccttggcgt
     1381 cctcgaccga gatgaacttc ttgatctcgc cctcgtccga actcatcgtc tcgaagctgc
     1441 cgatgctggg cggcatgccg gtgaacgggt ggcgctggaa gaagatgtcg ctgagctggc
     1501 cgctcggact gcgcaccagc gacaccggcc ggccgaagat gtgcggcagc atgaaatcgc
     1561 cgaccgcggc gtagtagatg gcgacgtcga gcttggttgg tcccgacttg ccgaacagcc
     1621 gccgcgtcgg attggtcacc cagatattgg cgaggtcggc gtccgaaacc agccgcttgc
     1681 gcttgaccgt ggtcggcgcc gcggtgatct ccggctcgcg caggcccttg aacacgccgt
     1741 ggcggacgta gttgtcggag gtgaggctgg tgtagtggac atgcgccgtg atcactggcc
     1801 ggatcggcac cacatccttg ggcatgcccg ccagcgcctg cccgccggcc gccagcggct
     1861 cgagccgatc gaggatcgtc accagctcgg caccgctgaa gccggtgccg cacttgccgc
     1921 gatagacgag ctcgccgtcg acccattgcc caagcgccag ggcgccgatg ccgcccgccg
     1981 ccggcgacag ggtatagccg acgatcggga agtcgccggc cttgagcgcc ttggtcttga
     2041 cccaggtctt cgagcgcgcc tgcagatagg ccgcgtcggc gcgcttggac atgatgccct
     2101 cgagcccgat ctcggtcgcc tggtcataga ggacctgcgc cgcgccgccg aaactgtcgg
     2161 agaactggat ggccgagctg cccgtaacca ccggcgccag caggtcgcgc agcaggtcct
     2221 tgcgggcgtc gagccgcgcc gcggtgaggt cgtagccgtc gaggtacatg atgtcgaagg
     2281 caaagaaggt gagccggtcg cccgcgtggt cgctgagcgc ctgctgcaga tcggcgaaat
     2341 ggctgacgcc gctgccgtcg acgacgacga tctcgccatc gaggatcgcc tgcttgaccg
     2401 gcaaggcggc gaaaccatcg gcgagcacgc catagcggtc ggtccagtcg atgccggtgc
     2461 gggtgaggag cctgaccttg ccggcctcca ccagcgcgat ggtgcgatag ccatcgaact
     2521 tgatctcgtg cagccagccc tcgcccttga ccggctcgtc cgactcggcg gcgagctgcg
     2581 gcttcatcga cttcggcatc ggcgccttga ccgccccctt gagcctgccc ggcgccggct
     2641 tgccgggagc cttcggcttt ggagcaacgt tcttcttcgc cgccgcatcg gccgccagca
     2701 gctgctcgat ggtcaacccc gacttgacgc tttccgggcg cgtcgcgagg atgtcggtct
     2761 tcgcatcggc cgacggatcg cgctccttga agaacagcca gttgccgtcc ggctcgttcg
     2821 gcttgggctt gagcctgacc agcatccagc cgcccttgag cttgtcgccc cacagccgga
     2881 acttgaaatc gccggtcctg aggccttccg ccggatcgcc catcggcgcc catgtgccgg
     2941 tatcccagac gatcatcgga ccaccgcc
//
LOCUS       DATAZA010000216         1797 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1764531, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000216 DATAZA010000000
VERSION     DATAZA010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1797
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1764531"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..466
                     /locus_tag="VHZ56_05535"
     CDS             <1..466
                     /locus_tag="VHZ56_05535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297465.1"
                     /translation="LIPKLLERFTLRPDWTASALATVLADAARKSDLGTYSARIVGTP
                     DGRPLGLYLMHIQPHRHASVLQLMSTQGREGVVLDRAIAYATDCGAVAIRGRAQPDFL
                     DALAERRAVLVPQLATVVHARDKAVLEAFRNGTAFFTGLAGENWMRLNGDRF"
     gene            625..>1797
                     /gene="asnB"
                     /locus_tag="VHZ56_05540"
     CDS             625..>1797
                     /gene="asnB"
                     /locus_tag="VHZ56_05540"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008876250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HEX4297466.1"
                     /translation="MCGVVGYFGPDVAPGDAEPLLRRMAHAVAHRGPDEMGLYAKDEI
                     GLGHRRLSIVGLADGQQPMLSDDGNFVISFNGEIFNYVELRAELVARGERFRTGSDTE
                     VLLRLLERDGEAALDRLNGDFAFALYDRTARRLTLARDRMGVRPLFYTWRHGTIVFAS
                     EVKALLEYPGVVAEIDPEALDQIFTLWSPIAPRTAFKDIFELPPGHLMVVENGRASTR
                     AWWTLDFPDIGTADDCREDDVAAELLALLDDATRIRLRADVPVGSYLSGGLDSSIVAA
                     LAAGHVGNRLRTFSVTFDSAEHDESAYQAQMVAALGTEHTSVAVAAADIARLFPAVVR
                     AAERPMLRTGPAPMQRLSAHVRNAGYKVVLTGEGSDEIFAGYDIFREAQVRRFVSRN"
BASE COUNT          269 a          645 c          562 g          321 t
ORIGIN      
        1 gctgatcccg aaactcctcg aacgcttcac gctgcggccg gactggaccg cgtccgccct
       61 cgccactgtg ctggccgacg ctgcccgcaa gtccgacctt ggcacttaca gcgcccgtat
      121 tgtcggcacc ccggacggcc gcccgctcgg cctctatctg atgcacatcc agcctcaccg
      181 ccacgccagc gtgctgcagc tgatgagtac ccagggacgc gagggcgtcg tactcgaccg
      241 ggccattgcg tatgcgaccg actgcggcgc cgtcgccatc cgcggccgcg cccagcccga
      301 ttttctcgac gccctcgccg agcgccgcgc cgtgctggtt ccgcagctcg ccacggtcgt
      361 tcacgcccgc gacaaggccg tgctcgaggc gttccgaaac ggcaccgcgt tcttcaccgg
      421 tctcgccggt gagaactgga tgcggctcaa cggcgatcgc ttttgaggcc aattggaatc
      481 aacttccaat cgatctgaag cgattaacca taccgtttaa gcttaccgtc cgaagggccc
      541 gaggctccgg gcgtttttcg ctgcctgccc ccgttaatag cgctaggact ttgttaagtt
      601 ttccgctcaa ggggactgcg gccgatgtgc ggcgtagttg gctatttcgg acccgatgtc
      661 gcccccggcg acgccgagcc gctgttgcgg cggatggcgc atgccgtcgc ccatcgcggc
      721 ccggatgaaa tgggactcta cgccaaggac gagatcggtc tcgggcatcg ccggctgtcg
      781 attgtcgggc ttgccgacgg ccagcagcca atgctgtcgg acgacggcaa ttttgtcatc
      841 agcttcaacg gcgagatctt caactacgtc gagctccgcg ccgagctcgt cgcccggggt
      901 gagcggttcc gcaccggctc cgacaccgag gttctgttgc gcctgctcga gcgcgacggc
      961 gaggccgctc tcgatcggct caacggcgac ttcgcgtttg ccctctacga caggactgcg
     1021 cggcgcctga cgctggcgcg cgatcgcatg ggggtgcgtc ccctcttcta cacctggcgc
     1081 cacggcacga tcgtctttgc ctccgaggtc aaggcgctgc tcgaatatcc gggggtcgtc
     1141 gccgagatcg accccgaggc gctggaccag atcttcacgc tgtggtcgcc gatcgcaccg
     1201 cgcaccgcct tcaaggacat cttcgagctg ccgcccggcc atctcatggt cgtcgagaac
     1261 ggccgcgcca gcacccgcgc ctggtggacg ctcgatttcc ccgacatcgg cacggccgac
     1321 gactgccgcg aagacgacgt cgcggccgag ttgctggccc tgctcgacga tgccacccgc
     1381 atccggctgc gggccgacgt gccggtcgga tcgtatctct ccggtggcct cgactcctcg
     1441 atcgtcgcag cgctcgccgc gggtcacgtc ggcaatcgct tgcgcacctt ctcggtaacc
     1501 ttcgacagcg ccgagcacga cgagagcgcc taccaggcgc agatggtcgc ggccctcgga
     1561 accgaacaca cgtcggtcgc cgtggctgct gccgacattg cacgattgtt cccagccgtg
     1621 gtgcgcgccg ccgagcggcc gatgctgcgc acggggcccg cgcccatgca gcggctgagc
     1681 gcccacgtgc gcaatgccgg ctacaaggtc gtgctcaccg gtgagggctc ggacgagatc
     1741 ttcgccggct acgacatctt ccgcgaagcg caggtgcggc ggttcgtctc ccgcaac
//
LOCUS       DATAZA010000217         4658 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1184155, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000217 DATAZA010000000
VERSION     DATAZA010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4658
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1184155"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            42..530
                     /locus_tag="VHZ56_05545"
     CDS             42..530
                     /locus_tag="VHZ56_05545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015241520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297467.1"
                     /translation="MTLPAPWRRALLLVHVTSAVGLVGAVAGFLALALAGAGGDVGVY
                     GAMRLLTVEVIVPLAAASLVVGVASSLLTPWGLLRHYWVIAKLGLTAIAVLVLLLQLP
                     TISGLAEAAARGSLAGETGGQLAMIVHAAGGLVVLVLATLLSVYKPRGLTRRGLRAGA
                     AG"
     gene            complement(527..1408)
                     /locus_tag="VHZ56_05550"
     CDS             complement(527..1408)
                     /locus_tag="VHZ56_05550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX4297468.1"
                     /translation="MDAPWIGLADGNAMPQLGFGTWQVADADCPRVVGDALRLGYRAI
                     DTAQGYGNEVGVGHAIARSGIPRSELFVTGKLRNGAHARDLALAAFDQTMAGLGLDVL
                     DLFLIHWPVPGQDRYVEAWTTLLELQQQGRIRSIGVSNFDPDQIERLIRETGVAPVLN
                     QIELHPRFQQRDLRGYHKRRDIRLMSWSPLGPGTTSTAWWVQHGRATAGYLLEDPTIT
                     GIADRIGRTPAQVIIRWHLEEGLLLAPKSTHPQRIAENFAVFDFRLDAEDLYRIGALD
                     APDGRIGALPREWNLIF"
     gene            complement(1509..2576)
                     /locus_tag="VHZ56_05555"
     CDS             complement(1509..2576)
                     /locus_tag="VHZ56_05555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000976 - transcription cis-regulatory
                     region binding [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX4297469.1"
                     /translation="MNSKSRATLSDVARRAGVSPVTVSRAIRHPEMVSEELRRRVEAA
                     VASLNYIPNHLASALASTRTQIVGVIVPSLTNGVFDDYLGAIQDVLNPAGIQMLVSNV
                     RYSEIEEEKAIGSLLGYHPEAMIVAGVDQTERSRQLLRHADIPVVQTMDVTDSPIDLN
                     IGLDHAAAGYAAVKYLYDHGRRRIAHLTARLDPRARRRHAGYQRAIDDLGLSSEGLVA
                     LSPRPSDVEMGGTLFAEILAQSPDVDAVFTCNDDLALGTLFECQRRGIRVPEDVAIIG
                     FNDLDFCVASVPPLTSVSTERRQMGTWAAETILELIRGSGRRPRQNRIDVGFSIKVRG
                     STAALPAAPAHRRARAAAETT"
     gene            2905..3993
                     /locus_tag="VHZ56_05560"
     CDS             2905..3993
                     /locus_tag="VHZ56_05560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HEX4297470.1"
                     /translation="MAFAVAPAMAAGPAVVAGPSADPQCYVPWSADTKFVQYPAKTGP
                     FRIALANGYIANTWRIQMIQTAKAYAAQPDVAKMLKEFKVVSTGEDVAAQISAINNFI
                     DSGYDAIVTDAQNPEAFAQVIKRAKDKGVVLVAFDNILNTTDDINVNVDQEGLGELWG
                     KWLVDHIPNGGKVLEVRGVAGTSVDTDRHDGIHKVLDASGKTWNVVEVVGKWDDGTAQ
                     KATADAIAVQGHFDGITAQGGDTGVVQAMVDASHPWVPFAGETENGFRKFCGAHAKDG
                     LVCTSAGTGPAQVAVAIKTALDALQGKVVPQSVKLPLAVVSDPDFKDGTNFYADQSDN
                     FFVGNAFPTCGINFTAQEIMGQSKTDTN"
     gene            4063..>4658
                     /locus_tag="VHZ56_05565"
     CDS             4063..>4658
                     /locus_tag="VHZ56_05565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041936284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4297471.1"
                     /translation="MPGNDPLFRMEGISKRYGGVRALEKAELTVEAGRVHAILGENGA
                     GKSTLIKIMSGVVAPDEGRMLLDGKPISFADPAAANAAGIVCIFQELSLIPALSVADN
                     IIASHPPKRFGMIDRTAQRRLAEDALKRAGGADIHPSALVKDLPLSRRQIVEIAKALA
                     RKPRVLILDEATSALTAGDVATVFEVLRRLRAEGIALL"
BASE COUNT          745 a         1472 c         1736 g          705 t
ORIGIN      
        1 aacccgctgc agcatctggg cggtcacctg gggatgggcg gatgacgctg ccggcgccat
       61 ggcggcgcgc gctgctgctg gtgcatgtga cgagcgcggt gggcctcgtc ggcgcggtgg
      121 cgggattcct ggcgctggca ctggcgggcg ccggcggcga cgtcggcgtc tatggcgcca
      181 tgcggctgct gacggtcgag gtgatcgtgc cgctggcggc cgcgtcgctg gtcgtcgggg
      241 tcgcgagctc gctgctcacc ccgtggggat tgctgcgcca ctactgggtg attgccaaac
      301 tcgggctgac ggcgatcgcg gtgctcgtgc tgctgttgca gctgccgacg atttccgggc
      361 tcgccgaggc ggcggcgcgc ggctcgctgg ccggcgaaac gggcggccag ctggcgatga
      421 tcgtccacgc cgccggcgga ctggtcgtgc tggtgctggc gacgctgctg tcggtgtaca
      481 agccgcgcgg cctgacgcgg cgcggcttgc gggccggagc ggccggctag aagatgaggt
      541 tccattcccg cggcagggcg ccgatgcggc cgtcgggcgc gtcgagcgca ccgatgcggt
      601 agaggtcctc ggcgtcgagg cggaaatcga agacggcgaa gttttccgcg atgcgctgcg
      661 gatgggtgga tttgggcgcc agcagcaggc cctcctcgag gtgccagcgg atgatcacct
      721 gcgccggggt cctgccgatg cggtcggcga tgccggtgat ggtgggatcc tcgagcagat
      781 agccggcagt ggcacggccg tgctgcaccc accaggcggt gctggtggtg ccgggcccga
      841 gcgggctcca gctcatcagc cggatgtcgc ggcgcttgtg gtagccgcgc aggtcgcgct
      901 gctggaagcg cggatgcagc tcgatctggt tgagcaccgg ggcgacgccg gtctcgcgga
      961 tcagccgctc gatctggtcg gggtcgaaat tggagacgcc gatggagcgg atgcggccct
     1021 gctgctgcag ctcgagcagc gtggtccagg cctcgacata gcggtcctgg ccggggaccg
     1081 gccagtggat gaggaagaga tcgagcacat cgaggccgag cccggccatg gtctggtcga
     1141 aggcggcgag cgcgaggtcg cgggcgtggg cgccgttcct gagcttgccg gtgacgaaca
     1201 gctcgctgcg ggggatgccg ctgcgggcga tggcgtggcc gacgccgacc tcgttgccgt
     1261 agccctgggc ggtgtcgatg gcccggtagc cgaggcgcag ggcgtcgccg acgacccggg
     1321 gacaatcggc gtcggccacc tgccaggtgc cgaaaccgag ctgcggcatc gcgttgccat
     1381 cggcgaggcc gatccacggc gcgtccatcc ctgccctccc ccgaggccgg tggaaatcgt
     1441 gccgcgaaac ggcgccacag acaagccggc aggcgccggc gcggcgagcg gtggaaaagt
     1501 gccgcgggct aggtggtctc ggcggcggct cgggcccggc gatgagcagg ggcagccggc
     1561 agcgccgcgg tcgagccgcg aaccttgatc gagaagccga catcgatgcg gttctggcgc
     1621 ggccggcggc cggaaccgcg gatcagctcg aggatggtct cggcggccca ggtgcccatc
     1681 tgccggcgct cggtcgacac cgaggtcagc ggcggcaccg aggcgacgca gaagtcgagg
     1741 tcgttgaagc cgataatggc gacgtcctcg ggcacgcgga tgccgcgtcg ctggcactcg
     1801 aacagcgttc caagcgccag atcgtcattg caggtgaaca ccgcgtcgac atcgggcgac
     1861 tgtgccagga tttcggcgaa cagcgtgccg cccatctcga cgtcggaggg gcgcggcgag
     1921 agcgcgacga ggccctcgct cgagagcccg agatcgtcga tggcgcgctg gtagccggca
     1981 tggcggcggc gggcccgcgg atcgagccgc gcggtgagat gggcgatgcg gcggcggcca
     2041 tggtcgtaga ggtatttcac tgcggcgtag ccggcggcgg cgtggtcgag cccgatgttg
     2101 aggtcgatcg ggctgtcggt cacgtccatg gtctgcacca ccgggatgtc ggcatggcgc
     2161 agcagctggc gcgagcgctc ggtctggtcg acgccggcga cgatcatcgc ctcggggtgg
     2221 tagccgagga ggctgccgat ggccttttcc tcctcgatct cggaatagcg gacgttggac
     2281 accagcatct ggatgccggc cgggttgagc acgtcctgga tggcgccgag gtagtcgtcg
     2341 aagacgccgt tggtgagcga ggggacgatg acgccgacga tctgggtgcg ggtcgaagcc
     2401 agggcgctgg cgaggtggtt ggggatgtag ttgagcgagg cgacggccgc ctcgacgcgg
     2461 cggcgcaatt cctcggagac catttcggga tgacggatgg cgcgggagac ggtgaccgga
     2521 ctgacgccgg cgcgcctcgc cacgtcggac agggtcgcgc ggctcttgct gttcaaatct
     2581 gcccccgttg gccggcagtg atagacgacg ggccgatcgg cgcaacagga ctgaatgtcg
     2641 ctgagcccgt cttcacaacc attgatagcg ctttcagaag cgattgacag cgctttcatt
     2701 tgtggcctag cgtcggaatg gggagggaga acgcccagca tcccggatgt gggggccgcg
     2761 ctgaaacatg cgtggaccgc ggccggcgaa gctttgggcg gggcctgccc gatcgccgat
     2821 cgagggatcg gccacaaggg aggaaatatc gtgaaatcga gtacgcttct gaaactcagc
     2881 ctcggcgccg cggccggcgt gctgatggcg tttgccgtcg ccccggcgat ggcggcgggg
     2941 ccggcagtgg tggcaggtcc gtcggcggat ccgcagtgct acgtgccgtg gtcggccgac
     3001 accaaattcg tgcagtatcc ggccaagacc gggccgttcc gcatcgcgct cgccaacggc
     3061 tacatcgcca acacctggcg catccagatg atccagacgg ccaaggccta tgcggcacag
     3121 cccgatgtcg ccaagatgct caaggagttc aaggtcgtct cgaccggcga ggacgtcgcc
     3181 gcgcagatct cggcgatcaa caacttcatc gattccggct atgacgcgat cgtcacggac
     3241 gcacagaacc ccgaggcctt cgcgcaggtg atcaagcgcg ccaaggacaa gggcgtggtg
     3301 ctggtggcgt tcgacaacat cctcaacacc accgacgaca tcaacgtcaa cgtcgaccag
     3361 gaaggcctgg gcgagctgtg gggcaagtgg ctggtcgacc acatcccgaa cggcggcaag
     3421 gtgctcgaag tgcgcggcgt cgccggcacc tcggtcgaca ccgaccgcca cgacggcatc
     3481 cacaaggtgc tcgatgcctc gggcaagacc tggaacgtgg tcgaggtcgt cggcaagtgg
     3541 gacgacggca cggcgcagaa ggcaaccgcc gacgccatcg cggtgcaggg ccatttcgac
     3601 ggcatcaccg cgcagggtgg cgacaccggc gtggtgcagg cgatggtcga cgccagccac
     3661 ccgtgggtac cgttcgccgg cgagaccgag aacggcttcc gcaaattctg cggcgcccat
     3721 gccaaggacg gcctggtctg cacctcggcg ggcaccggcc cggcgcaggt ggcggtcgcg
     3781 atcaagaccg cgctcgacgc gctgcagggc aaggtcgtgc cgcagtcggt gaagctgccg
     3841 ctggcggtgg tctccgatcc cgacttcaag gacggcacca atttctacgc cgaccagtcc
     3901 gacaacttct tcgtcggcaa cgccttcccc acctgcggca tcaacttcac ggcgcaggaa
     3961 atcatgggac agagcaagac cgatacgaac taatcggggt ctacagctgc agccgcgggg
     4021 gataacatcc tccgcggcat gacgttgatt ggggacgact tgatgcctgg taacgacccg
     4081 ctcttccgca tggaaggcat ttccaagcgc tatggcggcg ttcgggccct cgagaaagcc
     4141 gaactgacgg tcgaagccgg gcgggtccat gcgatcctcg gcgagaacgg cgccggcaaa
     4201 tcgacgctga tcaagatcat gtccggcgtg gtggcgcccg acgaaggccg catgctgctc
     4261 gacggcaagc cgatcagctt cgccgatccg gcggcggcca atgcggcggg catcgtctgc
     4321 atcttccagg agctgtcgct gatcccggcg ctgagcgtcg ccgacaacat catcgcctcg
     4381 cacccgccca agcgcttcgg catgatcgac cggacggcgc agcggcggct ggccgaggac
     4441 gcgctcaagc gcgccggcgg cgccgacatc catccgagcg cgctggtcaa ggacctgccg
     4501 ctcagccgcc ggcagatcgt cgagatcgcc aaggcgctgg cgcgcaagcc gcgcgtgctg
     4561 atcctcgacg aggcgacctc ggcgctcacc gccggcgacg tcgccaccgt gttcgaggtg
     4621 ctgcggcggc tgcgggccga gggcatcgcg ctgctcta
//
LOCUS       DATAZA010000218         2677 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1532359, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000218 DATAZA010000000
VERSION     DATAZA010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2677
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1532359"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(11..1036)
                     /locus_tag="VHZ56_05570"
     CDS             complement(11..1036)
                     /locus_tag="VHZ56_05570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008127639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX4297472.1"
                     /translation="MTDPIETDVVIVGAGPVGLFAVFELGLLDLKCHVIDILDRPGGQ
                     CTELYPEKPIYDIPGFPIVTGQELVDNLMKQIAPFGAQFHFGQIVTTLARQTDGRFLL
                     TTDADVALLARVVVVAAGGGSFQAKRPPVEGIEPYEGKSVFYAVRRIEDFRDQDVVIV
                     GGGDSALDWTLNLQPIARSLTLVHRRDAFKAAPASVNRMKELVMEGKINFLLGQISKL
                     EGANGQLSAVHFAMDSGEAMVHATRLLPFFGLTIKLGPVADWGLQLEESVVKVDTEKF
                     QTSEPGIFAIGDINSYAGKLKLILSGFHEAALMAQAAKHHVSPGERIVFQYTTSSTKL
                     QKKLGVA"
     gene            complement(1176..2462)
                     /locus_tag="VHZ56_05575"
     CDS             complement(1176..2462)
                     /locus_tag="VHZ56_05575"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: protein motif:HMM:NF002537.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004604 - phosphoadenylyl-sulfate
                     reductase (thioredoxin) activity [Evidence IEA];
                     GO_process: GO:0019379 - sulfate assimilation,
                     phosphoadenylyl sulfate reduction by
                     phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HEX4297473.1"
                     /translation="MAMHNLAFVQPKPDKLRALGIMALNGMFDEMDGIGVIRQAVTDL
                     LKDDVAIVSSFGADSAVLLHMVAAVDATLPVYFLETGKHFPETLAYVETLRSRLGLAN
                     VRWLRPDPLDLARFDPRGELWETDPDSCCHIRKTEPLEAEIANFGGWVTGRKRYQTAE
                     RGVLPHFELTADDRIKVNPLAYFSDADVNAYKTEHGLPEHPLFAKGYRSIGCAPCTTI
                     VAEGEDPRAGRWRGLNKKECGIHFDFNGAIAKPVATVEKTLFKDGAFIADPFRAWAEG
                     DDPASVRYTHIPVQVFLANREAVLSNPHPNGLLVMPADAVEDVAGDVGRFASIAISFP
                     GFTDGRGYSSARLLTERYGYAGELRAVGDVLMDQLTLMRRCGINVFVATHAATRQALE
                     SGQLATVNLFYQPIGTGEVPVGTRPFLRRPAESEKA"
BASE COUNT          425 a          988 c          803 g          461 t
ORIGIN      
        1 gatcttcatc tcacgcgaca cccagcttct tttgcagctt ggtgctcgac gtcgtgtact
       61 ggaacacaat tctctcgccc gggctgacat ggtgcttggc cgcctgcgcc atcagcgccg
      121 cctcatggaa gcccgacagg atcagcttca gcttgccggc gtaggaattg atgtcgccga
      181 tggcgaagat ccccggctcc gaggtctgga acttctcggt gtcgaccttc accacgctct
      241 cctcgagctg cagcccccag tcggccaccg gcccaagctt gatggtcagc ccgaagaacg
      301 gtagcagccg cgtcgcgtgc accatcgcct cgcccgaatc catggcgaaa tgcaccgcgc
      361 tcagctgccc gttggcgccc tcgagcttgc tgatctggcc gagcaggaag ttgatcttgc
      421 cctccatcac cagctccttc atgcggttga ccgaggccgg cgccgccttg aacgcatcgc
      481 gccggtgcac cagcgtcagc gaccgcgcga tcggctgcag gttgagcgtc cagtccagcg
      541 cgctgtcgcc gccgccgacg atcaccacgt cctggtcgcg gaaatcctcg atccgccgca
      601 ccgcgtagaa caccgatttg ccctcgtacg gctcgatgcc ctcgaccggc ggccgcttcg
      661 cctggaacga gccgcccccc gccgccacca ccaccaccct ggcgagcaat gccacgtcgg
      721 cgtccgtcgt cagcaggaat cggccatcgg tctgccgcgc cagcgtcgtc acgatctggc
      781 cgaagtggaa ctgcgctccg aacggcgcga tctgcttcat cagattgtcg accagctcct
      841 gcccggtgac gatcggaaac cccggaatgt cgtagatcgg cttttccgga tagagctccg
      901 tacactgccc gcccggccgg tcgaggatat cgatcacgtg gcacttgagg tcgagcagcc
      961 cgagctcgaa caccgcgaac aggcccaccg gccccgcccc cacaatcacc acgtcggttt
     1021 cgatcggatc ggtcattctc ttgcagccgc gagccccgct cgccctctct cggaatcatc
     1081 cccgcgacgg cgggaatctc tgttgtcttg tctcggccgg agcgccaacg gaggttcccg
     1141 ctgtggtggg aacggcctcg cgggcgaggt gcgtcctacg ccttctcgct ctccgccggc
     1201 cgccgcagga acggccgcgt ccccaccggt acctcgcccg tcccgatcgg ctggtagaac
     1261 aaattcaccg tcgccagctg cccgctttcg agcgcctgcc gcgtcgccgc atgcgtcgcc
     1321 acgaacacat tgatgccgca gcgccgcatc agcgtcagct ggtccatcag cacgtcgccg
     1381 accgcccgca gctcgcccgc atacccgtac cgctcggtga gcagccgcgc gctgctgtag
     1441 ccgcgcccgt cggtgaaccc cggaaagctg atcgcgatcg atgcgaaccg gcccacatcg
     1501 cccgccacgt cctccaccgc gtccgccggc atcaccagca gcccgttcgg gtgcggattg
     1561 ctcagcaccg cctcgcggtt ggcgaggaac acctgcaccg ggatatgcgt gtaccgcacg
     1621 ctcgccggat cgtcgccctc ggcccacgcg cggaacggat cggcgatgaa cgcgccgtcc
     1681 ttgaacaggg tcttttccac cgtggccacc ggctttgcga tcgctccgtt gaagtcgaag
     1741 tggatgccgc actctttctt gttgaggccg cgccagcggc cggcgcgcgg atcctcgccc
     1801 tcggcgacga tcgtcgtgca cggcgcgcac ccgatcgacc ggtagccctt agcgaacagc
     1861 ggatgctccg gcaacccgtg ctcggtcttg taggcgttga cgtccgcgtc cgagaaatac
     1921 gccagcgggt tgaccttgat gcgatcgtcc gccgtcagct cgaaatgcgg cagcacgccg
     1981 cgctccgccg tctggtagcg cttccgcccg gtgacccagc cgccgaaatt ggcgatctcg
     2041 gcctccagcg gctcggtctt gcggatatgg cagcagctgt cggggtcggt ctcccacagc
     2101 tcgccccgcg gatcgaaccg cgccaggtcc agcgggtcgg gccgcagcca gcgcacattg
     2161 gcaagcccca gccgcgaccg cagcgtctcg acataggcca gcgtctccgg gaagtgcttg
     2221 cccgtctcga ggaaatacac cgggagcgtc gcgtccaccg ccgccaccat gtgcagcagc
     2281 accgccgaat ccgccccgaa cgacgagacg atcgccacgt cgtccttcag caggtcggtc
     2341 accgcctgcc ggatgacgcc gatgccgtcc atctcgtcga acatgccgtt gagcgccatg
     2401 atcccgaggg cgcgcagctt gtcgggcttg ggctgaacga aggcgaggtt atgcatggcc
     2461 atagagcgcc gtcctttccc ttcgcccctt aggggagaag gtggcgcgaa gcgccggatg
     2521 aggggtcact gagctacgca tttccgtaca atgcttcctt gaacggcgct tcgcccagcc
     2581 gccgataggc cgcgatgaac ggctcgtccg ggctctgccg tcgggcgatg taggtatcga
     2641 ccagcttctc gatcgccacc ggcacctcgt cggcccc
//
LOCUS       DATAZA010000219         1655 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3853571, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000219 DATAZA010000000
VERSION     DATAZA010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3853571"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..784)
                     /gene="nuoE"
                     /locus_tag="VHZ56_05580"
     CDS             complement(<1..784)
                     /gene="nuoE"
                     /locus_tag="VHZ56_05580"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019565474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HEX4297474.1"
                     /translation="MTVRRLAADTMQPAGFAFTADNQAWAQKTIARYPAGRQASAVIP
                     ILWRAQEQEGWVTRAAIEAVAGMLGMAYIRVLEVATFYTQFLLKPAGSNAHIMVCGTT
                     PCMLRGADELLDICRHKIAHDPLDVSADGKLSWEEVECPGACVNAPMIMIGDDTYEDL
                     TAPRFEEIVEAFRAGNGSSITPGTQIDRHFSAPVGGRTTLLDTPTAARTYRPFPPPPP
                     PAAPAAPAPVAVPAPTAAAPAQPAPAAAAPAKADVPPAPPASA"
     gene            complement(781..1200)
                     /locus_tag="VHZ56_05585"
     CDS             complement(781..1200)
                     /locus_tag="VHZ56_05585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297475.1"
                     /translation="MKRLFAAAGLGAILAGAAASPAFADLVAMRDLLTQGYKVVSTVV
                     IPQDVIRRAMANESWTDDLLYTLQLGPNVAFCHLPVLQAWTDVNILGYQCYVPPLAPQ
                     PAAPPPPADASSSSSAEPSLSQPEPQPQPAPSSASSQ"
     gene            complement(1197..>1655)
                     /locus_tag="VHZ56_05590"
     CDS             complement(1197..>1655)
                     /locus_tag="VHZ56_05590"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026255.1"
                     /note="Catalyzes the transfer of electrons from NADH to
                     quinone; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HEX4297476.1"
                     /translation="FDIPIGKNGDCYDRYLVRMDEMRQSIRIMKQVIALLNSPEGKGP
                     VSSSDGKVVPPKRGEMKQSMEALIHHFKLYTEGYKVPAGEVYAAVEAPKGEFGVYLVA
                     DGTNKPYRCKIKAPGFAHLSAMDFLCRGHMLADVSAVLGSLDIVFGEVDR"
BASE COUNT          256 a          558 c          565 g          276 t
ORIGIN      
        1 cggcactcgc ggggggagcg ggcggcacat cggccttggc cggtgctgca gcggccggtg
       61 ctggctgggc cggagcagcg gcggttggcg ctggcaccgc gaccggtgcc ggcgcagcag
      121 gggccgcggg cggtggcggc ggtggaaacg gcctgtacgt ccgcgccgca gtcggcgtgt
      181 cgagcagggt cgtccgtcca ccgacgggag ccgagaaatg ccggtcgatc tgtgtgcccg
      241 gtgtgatcga gctaccgttg ccggcacgga acgcctcgac gatctcctcg aaccgcggcg
      301 ccgtgagatc ctcgtaggtg tcgtcgccga tcatgatcat cggcgcattc acgcaggcgc
      361 cggggcattc gacctcttcc cagctgagct tgccgtcggc cgacacatcg agcggatcgt
      421 gcgcgatctt gtggcggcag atatcgagca gctcatcggc gccccgcagc atgcacggag
      481 tggtgccgca caccatgatg tgcgcattgc tcccagccgg cttcagcagg aactgcgtgt
      541 agaacgtcgc cacctcgagc acgcggatat aggccatgcc gagcatcccc gcgacggcct
      601 cgatggcggc acgggtgacc cagccctcct gctcctgcgc ccgccacagg atcgggatca
      661 ccgccgacgc ctgccgtccg gccggatagc gggcgatggt cttttgcgcc cacgcctggt
      721 tgtccgccgt gaaggcgaat cccgctggct gcatggtatc ggctgcgagg cggcgaacgg
      781 tcattggctg ctggcactcg aaggcgcggg ctgcggctgc ggctcgggct gcgacaggct
      841 cggctcggcg ctcgatgacg acgatgcgtc ggcgggcggc ggcggcgctg ccggctgcgg
      901 cgccagcggc ggcacgtagc actggtagcc gaggatgttc acgtcggtcc acgcctgcag
      961 caccggcagg tggcagaagg cgacattcgg accgagttgc agcgtgtaga gcagatcgtc
     1021 ggtccagctc tcgttggcca tggcgcgacg gatgacgtcc tgcggaatga ccaccgtcga
     1081 tacgactttg tacccctgcg tcagcaggtc ccgcattgcc acgaggtcgg caaaggccgg
     1141 actggcggct gcgcccgcca ggattgcgcc gaggcccgcc gcagcgaaca gacgtttcat
     1201 cgatccacct ccccaaacac gatgtcgagc gaacccagca ccgcggatac gtcggccagc
     1261 atgtgccccc ggcacaggaa atccatggcg ctcagatgcg caaaccccgg tgccttgatc
     1321 ttgcagcgat acggcttgtt ggtgccgtcg gcgacgaggt acacgccgaa ctcgcccttc
     1381 ggcgcctcga ctgcggcata gacctcgccc gccggcacct tgtagccctc ggtgtagagc
     1441 ttgaagtgat ggatcagcgc ttccatcgac tgcttcatct ccccgcgctt cggcggcacc
     1501 accttgccgt cgctcgacga cacgggcccc ttgccttccg gcgagttcag cagggcgatc
     1561 acctgcttca tgatccggat cgactgccgc atctcgtcca tgcgcaccag gtagcgatcg
     1621 tagcagtcgc cgttcttgcc gatcgggatg tcgaa
//
LOCUS       DATAZA010000220         1674 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1997019, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000220 DATAZA010000000
VERSION     DATAZA010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1997019"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1057
                     /locus_tag="VHZ56_05595"
     CDS             <1..1057
                     /locus_tag="VHZ56_05595"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEX4297477.1"
                     /translation="GLVSGFTTTMAEDGRARTELVLAQPAVVQQAYVLDKIAGQPARL
                     VVDLIPTTEDDFAARIAADAASAASSGPDTASAAVELSPPSSLEPAPTSSEAAATEPS
                     VEPPPLRGSEALTAPALPPGSRPLIVLDPGHGGIDNGASAPNGTHEKDITLAFALQLR
                     DLLVKSGRFDVALTRDDDTYLTLNERVDLARKNKADLFISLHADTFQEADIRGASIYT
                     RNEKATDILDRVLADGENHADIVAGYVQPDTKPEVVDILVDLMRRQMRQQSYLAAEDI
                     VKAMEPNVALRRFPVRQADFFVLQAPDVPSMLIELGFLSNAADIKNLQDANWRDKMVA
                     AIATGVGDYFAELSAGG"
     gene            1226..>1674
                     /locus_tag="VHZ56_05600"
     CDS             1226..>1674
                     /locus_tag="VHZ56_05600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HEX4297478.1"
                     /translation="MFRILGWLFGFAVFCGLAAVIVAGIYLNQVAANLPDYTVLKDYQ
                     PPVTTRVHAADGTLLAEYAHERRLFQPIETIPPQLIHAFISAEDKDFYSHHGISIDGI
                     IRAIRDNVLARANGDDSIQGGGSTITQQVAKNFLLNDQQTWDRKIQEA"
BASE COUNT          280 a          617 c          534 g          243 t
ORIGIN      
        1 ggggctggtc tcggggttca ccacgacaat ggccgaggac ggccgcgccc gcaccgaact
       61 ggtgctcgcc cagccggcgg tggtgcagca ggcctatgtg ctcgacaaga ttgccgggca
      121 gccggcccgc ctggtggtcg atctcattcc caccaccgag gacgatttcg cggcccgcat
      181 cgccgccgac gccgccagcg cggcatcgag cgggccggac accgccagcg ccgccgtgga
      241 actgtcgcca ccgagcagcc tcgagccggc gcccacttcg tctgaggcgg ccgcgaccga
      301 accctcggtc gagcccccgc cgctgcgcgg cagcgaggcg ctgaccgccc cggcgctgcc
      361 gcccggcagc cggccgctga tcgtgctcga cccgggccat ggcggcatcg acaacggcgc
      421 cagcgccccc aacggcacgc acgagaagga catcacgctc gccttcgcgc tgcagctgcg
      481 cgacctgctg gtcaagtcgg gccgtttcga cgtggcgctg acccgcgacg acgataccta
      541 cctcaccctc aacgagcggg tggacctggc ccgcaagaac aaggccgacc tcttcatctc
      601 gctgcacgcc gacaccttcc aggaggccga catccgcggg gcgtcgatct acacccggaa
      661 cgagaaggcg accgacatcc tcgaccgggt gctggccgat ggcgagaacc acgccgacat
      721 cgtcgccggc tacgtccagc ccgacaccaa gcccgaggtg gtcgacatcc tcgtcgacct
      781 gatgcgccgg cagatgcggc agcaatcgta cctggcggcc gaggatatcg tcaaagccat
      841 ggagcccaac gtggcgctcc ggcgcttccc ggtgcggcag gccgatttct tcgtgctgca
      901 ggcccccgac gtgccctcga tgctgatcga gctcggcttc ctcagcaatg ccgcggacat
      961 caagaacctg caggacgcca actggcgcga caagatggtg gcggccatcg cgacgggcgt
     1021 cggcgactat ttcgccgagc tgagcgcggg cggctgatgc ggacgacgcg gcgtggcatc
     1081 gatgcaacgg cctgcggcgg agcggcgcac aacgccgcga cggcgcgcgg tttgtccata
     1141 tttccgccgc cgtctgctat gagtgcagac gccgatgcgg tgcgcctccc gcgccgcgcc
     1201 ggcgattctg cgggttaggg gctccatgtt ccgtattctg ggctggctgt tcggcttcgc
     1261 cgtgttctgc ggccttgctg cagtcatcgt tgccggcatc tacctgaacc aggtggcggc
     1321 caacctgccc gactacacgg tgctcaagga ctaccagccg ccggtgacga cgcgcgtcca
     1381 cgccgccgac ggcacgctgc tggccgaata cgcgcatgag cgccggctgt tccagcccat
     1441 cgagaccatc ccgccgcagc tgatccacgc cttcatctcg gccgaggaca aggatttcta
     1501 cagccaccac ggcatctcca tcgacggcat catccgcgcc atccgcgaca acgtgctggc
     1561 ccgcgccaat ggcgacgatt ccatccaggg cggcggttcg accatcaccc agcaggtggc
     1621 caagaacttc ctgctcaacg accagcagac ctgggaccgc aagatccagg aagc
//
LOCUS       DATAZA010000221         3212 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3506527, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000221 DATAZA010000000
VERSION     DATAZA010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3212
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3506527"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..249)
                     /locus_tag="VHZ56_05605"
     CDS             complement(<1..249)
                     /locus_tag="VHZ56_05605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007606262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4297479.1"
                     /translation="MPSEGRDAGPRAGWGLKLAAGLGLAFLIVPIVIIFVYAFTTEDK
                     TYQWPPPGLTLRWFGVAWGRADIWPALTLSLQVAAVSTL"
     gene            complement(239..1195)
                     /locus_tag="VHZ56_05610"
     CDS             complement(239..1195)
                     /locus_tag="VHZ56_05610"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013528022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4297480.1"
                     /translation="MTAEAAATAAILPARHGPFGRLSDVFWRRPKLLVLLLLLPAGLW
                     LGIVYLGSLVALLLQSFFHIDDFSGLIVEQLTLSTYAELFKPQNADVIERTVAMAAAV
                     TLASVVVAFPIAYLAARYLKGSWKAVFYLAVTLPLWSSYLVKVYAWKLILAKEGILTW
                     VFAQLHIGFVLDAILSIPVIGGNSLSFSFIGTFLVFLYIWLPYMILPIQAAVERVPAN
                     LIDAAADLGAPPLSSFRHVILPLALPGIVAGSIFTFSLTLGDFIIPQIVGNGRLFIGQ
                     VVYTQQGTAGNIPLAAAFTVVPIVIMGLYLWGARRLGAFDAL"
     gene            complement(1192..2190)
                     /locus_tag="VHZ56_05615"
     CDS             complement(1192..2190)
                     /locus_tag="VHZ56_05615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019862948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4297481.1"
                     /translation="MTSAVSFEKVSRHFGAVRAMDEVDLEVVPGEFFAMLGPSGSGKT
                     TCLRLIAGFEQPTSGHIAIFGDAVEGVPPYRRNVNTVFQDYALFPHLNVLQNVAFSLM
                     LQKVPRAERNKQAEAALEMVRLSGYGARRTGQLSGGQRQRVALARAIVSKPKVLLLDE
                     PLGALDLKLRESMQDELKALQRTLGITFIFVTHDQGEALSMADRVAVFNDGRVQQIGT
                     PEDIYKRPNTRFVADFVGSSNVLSPEFVYWIVGERRWASLRPEAIHVVAAGSGASRMT
                     GTILSRSYLGPVIRLLIDLNGTQLHAAVPSIDSVPAEGQRVTLGFAKDAIHLMEPA"
     gene            complement(2280..>3212)
                     /locus_tag="VHZ56_05620"
     CDS             complement(2280..>3212)
                     /locus_tag="VHZ56_05620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012759045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4297482.1"
                     /translation="SDEMVTLMNTGGFDLVTASGDASLRLVAGKKVVPVNLDLIPSWS
                     TVDDRLKNGPWFTVDGKHYGVPYQWGPNVLMYNTKVFPTAPTSWNVVFEKQDLPDGKS
                     NEGRVQAYDGPIYIADAALYLKAHKPELGIKDPYELNEAQYDAVLDLLKGQRALVGRY
                     WHDATVQVDDFKTEGVVASGSWPYQVNTLVAAQSPIASTIPQEGATGWADTTMLAADA
                     ADPNCAYLWLEHSIQPKVQGDVAAWFGSVPVVPAACKGDALLTDTGCATNGFDNFDKI
                     AFWKTPTQQCASENDQCIPYSRWVSDYIGVMGGQ"
BASE COUNT          566 a         1076 c         1065 g          505 t
ORIGIN      
        1 cagcgtcgac acggccgcca cctgcagcga cagcgtcagc gccggccaga tgtcggcacg
       61 gccccacgcg acgccgaacc atctgagcgt caagcccggc ggcggccact ggtaggtctt
      121 gtcctcggtg gtgaaggcgt agacgaagat gatgacgatg ggcacgatga ggaacgcgag
      181 gccgaggcca gcggcgagct tcagtcccca gccggcgcgc ggcccggcat cgcgaccttc
      241 agagggcatc gaacgccccc agccggcgcg cgccccagag gtagaggccc atgatgacga
      301 tcggcaccac cgtgaaggcg gcagcgagcg ggatattccc tgcggtgccc tgctgcgtgt
      361 agacgacctg cccgatgaac agccggccat tgccgacgat ctgcgggatg atgaaatcgc
      421 ccagcgtcag cgagaaggtg aagatcgacc ccgccacgat ccccggcagc gccagcggca
      481 ggatgacgtg gcggaagctc gagagcggcg gggcgcccag atcggccgcc gcgtcgatga
      541 gattggccgg cacccgctcc accgccgcct ggatcggcag gatcatgtag ggcagccaga
      601 tatagaggaa caccaggaac gtgccgatga acgagaagct gagcgaattg cccccgatca
      661 ccgggatcga caggatggcg tcgagcacga aaccgatgtg gagctgcgcg aacacccagg
      721 tgaggatgcc ctccttggcg aggatcagct tccacgcata gaccttgacc agatagctcg
      781 accacagcgg cagcgtcacc gccaggtaga acaccgcttt ccagctgccc ttgaggtagc
      841 gcgccgcgag gtaggcaatg ggaaatgcga cgaccaccga cgccagcgtg accgccgccg
      901 ccatggccac ggtgcgctcg atcacgtcgg cgttctgcgg cttgaacagc tcggcataag
      961 tcgagagcgt caattgctcg acgatcaggc cggagaagtc gtcgatgtgg aagaagctct
     1021 gcagcagcag cgcgaccagc gaccccagat agacgatccc cagccacagt ccggctggca
     1081 gcagcaggag cagcaccagc agcttcggac gccgccagaa gacgtcgctg agccggccga
     1141 acgggccgtg ccgcgccggc aggatcgcag ctgtggccgc ggcctccgcg gtcatgccgg
     1201 ctccatcagg tggatggcgt ccttggcaaa gccgagggtg acgcgctgcc cttcggcggg
     1261 aacgctgtcg atcgacggga ccgcggcgtg gagctgcgtg ccgttgaggt cgatcagcag
     1321 ccggatcacc gggccgagat agctccgcga caggatcgtg ccagtcatcc gcgatgcgcc
     1381 gctgccggca gccaccacat ggatcgcctc gggcctgagg ctggcccagc ggcgctcgcc
     1441 gacgatccag tacacgaact ccgggctgag cacgttggac gagccgacga aatcggcgac
     1501 gaaccgcgtg ttgggccgct tgtagatgtc ctcgggcgtg ccgatctgct gcacccggcc
     1561 atcgttgaac actgccaccc ggtcggccat gctgagcgcc tcgccctggt cgtgcgtcac
     1621 gaagatgaag gtgatgccga gcgtgcgctg cagtgccttg agctcgtctt gcatcgactc
     1681 gcgcagcttg agatcgagcg cccccagcgg ctcgtcgagc agcagcactt tcggcttgct
     1741 gacgatggcg cgggcgagcg ccacgcgctg ccgctgtccg ccgctgagct gtcccgtccg
     1801 ccgcgctcca tagcccgaca gccgcaccat ctcgagcgct gcttcggcct gcttgttgcg
     1861 ctcggcccgc ggcacctttt gcagcatcag cgagaaggcg acgttctgca gcacgttgag
     1921 gtgtgggaac agcgcgtagt cctggaacac ggtgttgacg ttgcgccggt agggcggcac
     1981 gccctcgacc gcatccccaa agatcgcgat gtgaccggaa gtcggctgct cgaagccggc
     2041 gatcaaccgc aggcaggtcg tcttgcccga gcccgatggc ccgagcatgg caaagaactc
     2101 gccgggcacg acctcgaggt cgacctcgtc catcgccctg accgcaccga aatggcgcga
     2161 taccttctcg aatgaaacgg cggaggtcac ttcaatgccc caagctttgc ggccgctgca
     2221 cccacagggt catccccgcg aaagcgggga cctccgtcca acggcccctc agcctgtcct
     2281 cattgcccgc ccatcacgcc gatgtagtcg ctgacccagc gcgaatatgg gatgcactgg
     2341 tcgttctcgc tggcgcattg ctgcgtcggg gtcttccaga acgcgatctt gtcgaaattg
     2401 tcgaagccgt tggtggcgca gccggtgtcg gtgaggaggg catccccctt gcaggccgcc
     2461 ggcaccaccg gcaccgagcc gaaccatgcg gcgacgtcgc cctgtacctt cggctggatc
     2521 gagtgctcga gccacaggta ggcgcagttg ggatcggccg cgtccgctgc aagcatcgtc
     2581 gtgtcggccc agccggtcgc gccctcctgc gggatggtcg aggcgatcgg cgactgcgcc
     2641 gcgacgaggg tattgacctg gtacggccag ctgccggagg ccaccacgcc ttcggtcttg
     2701 aagtcgtcga cctgcacggt ggcgtcgtgc cagtagcggc cgaccagcgc gcgctggccc
     2761 ttcagcaggt cgagcaccgc atcgtactgg gcctcgttga gctcgtacgg gtccttgatg
     2821 ccgagctccg gcttgtgggc cttgaggtag agcgccgcgt cggcgatgta gatcggcccg
     2881 tcataggcct ggacgcgtcc ctcgttcgac ttgccgtcgg gcaggtcctg cttctcgaac
     2941 accacgttcc agctggtcgg cgccgtcggg aacaccttgg tgttgtacat gaggacgttc
     3001 ggtccccact ggtacggcac gccgtaatgc ttgccgtcga cggtgaacca cggcccgttc
     3061 ttcagccggt cgtcgaccgt gctccagctc gggatgagat cgagattgac cggcaccacc
     3121 ttcttgcccg ccaccagccg cagcgacgca tcgccggagg cggtgacgag atcgaagccg
     3181 ccggtgttca tcagcgtcac catctcgtcc ga
//
LOCUS       DATAZA010000222         3089 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2461566, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000222 DATAZA010000000
VERSION     DATAZA010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3089
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2461566"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..850
                     /locus_tag="VHZ56_05625"
     CDS             <1..850
                     /locus_tag="VHZ56_05625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004106977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX4297483.1"
                     /translation="RAVTVRARKARGPGRWIVLALMVIALAATLFPFFLVLINGIKSS
                     VDYAENGPLSLPTAIDFSALVKFWGLADFTLKLVNSIYISAAVAVFGTLLSLLNAYAI
                     GIGKVRGSRVILIVLLLGLMVPQESIVYPLYFMAKETGLYDTQTSVIIIFSVLQSAFG
                     TYLLSSVLGSFPREILEAAEIDGAKRWQVLVYVLIPVLRPTLMVTATFFFIWTWNEFL
                     IPLVFLVSNSHQTVSVAMGLTRGQNLSDPVLQAAASLLGIAPTVVFFLIFQRTLTRGV
                     VAGAVK"
     gene            1042..2601
                     /locus_tag="VHZ56_05630"
     CDS             1042..2601
                     /locus_tag="VHZ56_05630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008597705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucan biosynthesis protein"
                     /protein_id="HEX4297484.1"
                     /translation="MVKGVLGLAILFASTSLTPVSFADDAAPSVPFSFDDLTARMRAV
                     AAAAYVPPSDVLPDVLAKLTYDDYRRINAIRARAPDLSTNFGYKLEPFHLGWLFKEPV
                     QLYQVDGDKASLYQFSAADFDYRNPATAAEIAKITLPGVAGFRIDCPLNVPDRLDELV
                     AFQGASYFRALGRGNSYGASARGLVIDSWVAQPEEFPRFSSFYFEKDDYGQPLVFYAT
                     LEGPSVAGAFKFAFDPGNANRQETVVDITARFFFRNDIAEIGIAPLTSMFLFADANRS
                     DFDDYRPQVHDSDGLYMEYDNGEHAWRALNNPPSVANSYFAQTNPRAFGLMQRARDFS
                     DYQDDGARYDTRPSILIEPQGDWGEGSVRLIEATAKLEADDNIGAFWVPKTPFRAGGE
                     AEFNYRIRWGDLTPDANGPVAYVVDTRAGQGGVSGVANKETLRKFVVDFFGGPLSDPN
                     LDPGTLDVVATISGGQVHYTSVSKLSENGVVRLAIDAEIDSKDPVELRAYLVGNGRQL
                     TETWLYQWRAA"
     gene            2598..2750
                     /locus_tag="VHZ56_05635"
     CDS             2598..2750
                     /locus_tag="VHZ56_05635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297485.1"
                     /translation="MKHETIFAVEHLRQRALPDAPLPMPRQVLERHFDWGGLLRIWSL
                     VRLRGG"
     gene            2784..>3089
                     /locus_tag="VHZ56_05640"
     CDS             2784..>3089
                     /locus_tag="VHZ56_05640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glucan biosynthesis glucosyltransferase H"
                     /protein_id="HEX4297486.1"
                     /translation="MAIALRWLALGLSAIPTALSAWLFVVLARADGWTPLDTLRLVLS
                     TACVFWIAWGAVSGLLGLFARRLERPERAGPSGSRTAILMPIYNEDPPSTFARIAAVS
                     "
BASE COUNT          488 a         1030 c          990 g          581 t
ORIGIN      
        1 cagggcggta accgttcgcg cccgcaaggc gcgcggtccg ggacgctgga tcgtgctggc
       61 gctcatggtc atcgccctcg cggcgacgct gtttccattc ttcctcgtgc tgatcaacgg
      121 catcaaatcc tcggtcgact atgccgagaa cggcccgctc tcgctgccga cggcgatcga
      181 tttcagcgcc ctcgtgaaat tctggggtct cgccgatttc accctcaagc tggtcaacag
      241 catctacatc agcgccgcgg ttgccgtctt cggcaccctg ctcagcctgc tcaacgccta
      301 tgccatcggg atcggcaagg tccgcggttc tcgcgtcatc ctcatcgtgc tgctgctcgg
      361 cctcatggtg ccgcaggaat cgatcgtcta tcccctctac ttcatggcca aggagacggg
      421 gctctacgac acgcagacct cggtcatcat catattctcg gtgcttcaaa gcgccttcgg
      481 gacctacctg ctgtcgtcgg tgctggggag cttcccgcgc gagatactgg aagccgccga
      541 aatcgacggc gcgaagcgct ggcaggtcct cgtctacgtc ctgatcccgg tgctgcggcc
      601 gacgctgatg gtgaccgcca cgttcttctt catctggacc tggaacgagt ttctgatccc
      661 gctggtgttc ctggtgtcga acagccacca gacggtgtcg gtggcgatgg gcctgacgcg
      721 cgggcagaac ctgtccgatc cggtcctgca ggcggccgct tcgctgctcg gcatcgcgcc
      781 gacggtggtg ttcttcctga tcttccagcg gacgctgacc cgcggcgtgg tggccggtgc
      841 cgtgaagtag acggcccacc caccgcaagc atggcgaatc gatggcgaag atgacggaag
      901 ccgttgtccc agctagtgaa aattcgcatg gctgacctgc gcgaacgata aattccaggc
      961 cgagttgttc cggatatttg tcatccggga cggaggtcta gcgtcgtgag ttccgaacga
     1021 gtcgcgttat cgcggcgcgc agtggtcaag ggtgtgctcg ggcttgccat ccttttcgct
     1081 tccacgtcgc tgaccccggt cagctttgcc gatgatgcgg cgccttccgt tcccttttcg
     1141 ttcgatgacc tcaccgcgcg catgcgggcg gtggcagcag cggcgtatgt gccgccctcc
     1201 gacgtcctgc cggacgtgct ggccaagctg acctacgacg actatcggcg gatcaacgcc
     1261 atccgcgccc gggcccccga cctcagcacc aatttcggct acaagctcga gccgttccat
     1321 ctgggctggc tgttcaagga accggtgcag ctttaccagg tggatggcga caaggcgtcg
     1381 ctctaccagt tcagcgcggc cgatttcgat taccgcaatc cggcgacggc cgccgagatc
     1441 gccaagatca ccctgcccgg cgtcgccggc ttccggatcg actgcccgct caacgtgccc
     1501 gaccggctcg acgaactggt ggccttccag ggcgccagct atttccgggc gctcgggcga
     1561 ggcaactcct acggcgccag cgcacgcggg ctggtgatcg attcctgggt ggcgcagccg
     1621 gaagagttcc cgcgcttttc gtcgttctat ttcgagaagg acgattacgg ccagccgctg
     1681 gtgttctacg ccacgctgga aggcccaagc gtcgccggcg ccttcaaatt cgccttcgat
     1741 cccgggaatg ccaaccggca ggagacggtg gtcgacatca cggcgcgatt ctttttcagg
     1801 aacgatatcg ccgagatcgg cattgcgccg ctgacctcga tgttcctgtt tgcggacgcc
     1861 aaccgcagcg acttcgacga ctatcggccg caggtccacg acagcgacgg cttgtacatg
     1921 gagtacgaca atggcgagca cgcctggcgc gcactcaaca atcccccgtc ggtcgccaat
     1981 tcgtacttcg cgcaaaccaa cccgcgggcg ttcggtctga tgcagcgggc gcgagatttc
     2041 tccgattacc aggacgacgg ggcccgctac gacacgcggc cgtcgatcct gatcgagccg
     2101 cagggcgact ggggcgaggg cagcgtgcgg ctgatcgagg ccaccgccaa gctcgaggcc
     2161 gacgataaca tcggcgcctt ctgggtgccg aagacgccgt tccgggcggg cggcgaggcc
     2221 gagttcaact accgcatccg ctggggcgac ctgacgcccg acgccaatgg cccggtggcc
     2281 tatgtggtcg acacgcgggc cggacagggc ggcgtatcgg gcgtcgccaa caaggagacg
     2341 ctgcgcaagt tcgtcgtcga tttcttcggc ggaccgctga gcgatccgaa cctcgatccg
     2401 ggcacgctcg acgtggtggc gaccatctcc ggcggccagg tgcactacac ctccgtttcg
     2461 aagctctccg agaacggcgt cgtccgcctg gcgatcgatg cggaaatcga ctccaaggac
     2521 ccggtcgagt tgcgcgccta tctcgtcggc aacggccgtc agctgaccga gacgtggctc
     2581 tatcagtggc gggcggcatg aaacacgaga ccatctttgc cgtcgaacat ctccggcagc
     2641 gggcgctgcc cgatgcgccg cttcccatgc cgcgacaggt cctggaacgg catttcgact
     2701 ggggcgggct gctgcggatc tggagtctgg tccggctgcg cggaggctga cgtcatggcg
     2761 gcattcgagc cggtggcctg gccgtggcga tagccctgag atggctggcg ctggggctga
     2821 gcgcgatccc gacggcgctg agcgcctggc tgttcgtcgt gctggcgcga gcggacggct
     2881 ggacgccgct cgatacgctg cggctggtgc tgtccaccgc ctgcgtgttc tggatcgcat
     2941 ggggcgcagt cagcgggctg ctcggcctct tcgcccgtcg cctcgagcgc ccggagcggg
     3001 ccggcccaag cggcagccgc accgccatcc tgatgccgat ctacaacgag gacccgccct
     3061 cgaccttcgc ccgcatcgcc gcggtcagc
//
LOCUS       DATAZA010000223         1512 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_373416, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000223 DATAZA010000000
VERSION     DATAZA010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_373416"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..830)
                     /locus_tag="VHZ56_05645"
     CDS             complement(<1..830)
                     /locus_tag="VHZ56_05645"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEX4297487.1"
                     /translation="MPLSQVSVPLTRDQAYALVDAVMERDDLALTASAHEDAATGEWI
                     FEATTDLLPDLGAFEELARRTLGGETAFTVTPLDPQVNWVARALEGLPPVIAGGFYVY
                     GSHEAAAPPAGTVPIRIDAAQAFGTGHHETTTGCLEAIAQTLRRTRPRRMLDVGTGTG
                     VLAIALAKRTHLPVLASDIDPVATRTAMDNARDNGVPGLIRAVTAPGLAHPAIRAGAP
                     YDLIVANILAAPLAALAPAIGRAAGRRATVILSGLLVGQAARLVTAYAAQGMVLRQRL
                     V"
     gene            complement(877..>1512)
                     /locus_tag="VHZ56_05650"
     CDS             complement(877..>1512)
                     /locus_tag="VHZ56_05650"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX4297488.1"
                     /translation="SVDIGRPFQLADREVLLSFDDGPSPAHTPSVLRTLDLFGVGAVF
                     FMVGVNATRWPATAQQVRAHGHLVGSHTATHPPLVEMPPGTAAAEIAEGHAAVGQALG
                     SAPAPLFRFPYLEDSAALREIVGRQGLVVVGADMMILDWTDRTPDEILAIALDEIGRA
                     GGGTVVLHDVQGRTARMLPWLLATLARRGYSVVTPTLAARVERPGEVAVAA"
BASE COUNT          199 a          536 c          585 g          192 t
ORIGIN      
        1 accagccgct ggcgcagcac catgccctgc gccgcatagg cggtgaccag ccgcgccgcc
       61 tgcccgacga gcaggcccga caggatgacg gtggcacggc ggcccgcggc acggccgatg
      121 gcgggggcca gcgcggcgag cggcgcggcg aggatgttgg cgacgatcag gtcgtagggc
      181 gcgccggcgc ggatcgccgg atgcgccagc cccggcgccg tcacggcgcg gatcagcccc
      241 ggcacgccat tgtcacgcgc attgtccatc gccgtgcggg tcgcgaccgg gtcgatgtcg
      301 ctggccagca ccggcaggtg cgtccgcttc gccagcgcaa tggccagtac cccggtgccg
      361 gtgccgacgt cgagcatgcg gcgcggccgg gtgcgccgca gcgtctgcgc gatcgcctcg
      421 aggcagccgg tggtggtctc gtggtggccg gtgccgaagg cctgcgcggc gtcgatgcgg
      481 atcggcacgg tgccggccgg cggcgcggcg gcctcgtggc tgccatagac gtagaagccg
      541 cccgcgatca ccggcggcag cccctccagc gcgcgcgcca cccagttcac ctgtgggtcg
      601 agcggcgtga ccgtgaaggc ggtctcgccg cccagcgttc gccgcgccag ctcctcgaag
      661 gcgccgaggt cgggcagcag atcggtggtc gcctcgaata tccattcgcc ggtcgctgcg
      721 tcctcgtgcg ccgaggcggt gagcgccagg tcgtcgcgct ccatgacggc gtcgaccagc
      781 gcataggcct gatcgcgggt gagggggacg gagacctggc tgagcggcat gcggccttgt
      841 tgccggggcg ccgcgcgatg tcaacgggac gccggctcag gcggcgaccg caacctctcc
      901 cggccgttcg acgcgcgccg ccagcgtcgg ggtgacgacg ctgtagccgc gccgcgcgag
      961 ggtggcgagc agccacggca gcatgcgcgc ggtgcggccc tgcacgtcgt ggaggacgac
     1021 ggtgccgcct ccggcgcggc cgatttcgtc gagcgcgatg gcgaggattt cgtcgggcgt
     1081 ccggtcggtc cagtcgagga tcatcatgtc ggcgccgacg acgacgaggc cctgccgccc
     1141 gacgatctcg cgcagcgcgg cgctgtcctc gagataggga aagcggaaca gcggcgccgg
     1201 ggcgctgccg agcgcctgcc cgaccgcagc gtggccttcg gcgatctcag ccgccgccgt
     1261 gccgggcggc atttcgacca gcggcggatg ggtggcggtg tggctgccca ccaggtgccc
     1321 gtgtgcgcgc acctgctgcg ccgtcgccgg ccagcgcgtg gcattgacgc caaccatgaa
     1381 gaacaccgcg ccgacgccaa acaggtcgag cgtccgcagc acgctgggcg tatgggccgg
     1441 cgaggggccg tcgtcgaagc tcagcagcac ctcgcggtcg gccagctgga acgggcggcc
     1501 aatgtccacc ga
//
LOCUS       DATAZA010000224         2860 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3042153, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000224 DATAZA010000000
VERSION     DATAZA010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2860
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3042153"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            25..993
                     /locus_tag="VHZ56_05655"
     CDS             25..993
                     /locus_tag="VHZ56_05655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4297489.1"
                     /translation="MRINRDLLLAIIIVVMVGAVGLLTPSFVSPNNLRGLVNDTAILV
                     MMALGQMTVILTKCIDLSVAANVAFTGVVVALVNAAFPDIPIPLIMLLAIVIGLVLGA
                     FNGIMVWLVGIPSIVVTLGTLSIYRGLAFIASGGTSIVGHLMSPGFIAVPRMQVLGIA
                     AMTWFAVIVVIVIALLLRVTRIGRAFFAAGGNPVAAVYAGINVRRTQFVAFCISGAIS
                     GFCGYLWASKYTIAYVDIASGFELQVIAACVIGGVSISGGIGTATGAVLGALFLGVVT
                     NALPVIHVSPFWQLAISGIAILAAVIINTVRERRVGRLVLREAVVR"
     gene            990..1991
                     /locus_tag="VHZ56_05660"
     CDS             990..1991
                     /locus_tag="VHZ56_05660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019863181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4297490.1"
                     /translation="MTDQAPAARSIPDRLSTGSAWWKRWETILVVVAVAIFIANSFAS
                     PYFLDPSNLSLATFNFTETAMIGFAMAPLIVAGEIDLSVAGILALSSTAMGAAATAGA
                     PTPLLVLIGLAVGVAAGAVNGFIVTRFRVPSIVVTIGTMSLYRGIAYVVLGDQVYRKY
                     PPDFAWFGQGYVVWVFSFEFVLFLVLAIVFGVLLHLTTFGRRIYAIGNNPVAAQFSGV
                     RVDRIRFTLFMLTGLMSGVAGVLLTSRIGSTRPTIATGYELQAITMVVLGGVNILGGS
                     GTILGVVIAAFIMGLVTLGLGLLNVPGIVQSIVTGGLLIVVIAIPILWNRWRRSARQ"
     gene            1988..2305
                     /gene="rhaM"
                     /locus_tag="VHZ56_05665"
     CDS             1988..2305
                     /gene="rhaM"
                     /locus_tag="VHZ56_05665"
                     /EC_number="5.1.3.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008872121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0062192 - L-rhamnose mutarotase activity
                     [Evidence IEA];
                     GO_process: GO:0019301 - rhamnose catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose mutarotase"
                     /protein_id="HEX4297491.1"
                     /translation="MSEHYAFTMQLNPGMKAEYKQRHDEIWPELSALLKEAGVSDYSI
                     FLDEATGTLFGVLHRTAGHTMADLPNHPVMQRWWTHMADIMATHPDNRPVETPLEPVF
                     HME"
     gene            2310..>2860
                     /locus_tag="VHZ56_05670"
     CDS             2310..>2860
                     /locus_tag="VHZ56_05670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014528985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY family carbohydrate kinase"
                     /protein_id="HEX4297492.1"
                     /translation="MVVAVIDIGKTNAKVALVDLARLRETAMRKTPNVVRTDGPYPHF
                     DEAHLWEFILDSLRDLGREAPIESISITTHGATAALLDAEGNLALPILDYEFTGLEAL
                     TDDYDTVRPPFAETGTPRLPGGLNLGAQLFWQQRTHPADFARATSILMYPQYWGFRLT
                     GVRANEATSLGCHTDLWSPHRRT"
BASE COUNT          395 a         1092 c          831 g          542 t
ORIGIN      
        1 caaccagccg gcggaggccg cgtgatgcgg atcaaccgcg acctgctgct cgccatcatc
       61 atcgtcgtca tggtcggcgc cgtcggcctg ctgaccccgt ccttcgtgtc gcccaacaat
      121 ctgcgcggcc tcgtcaacga caccgccatc ctggtgatga tggcgctcgg ccagatgacg
      181 gtgatcctga ccaagtgcat cgacctgtcg gttgccgcca acgtcgcctt caccggcgtc
      241 gtcgttgcac tggtcaatgc cgccttcccc gacatcccga tcccgctgat catgctgctc
      301 gccatcgtca tcggcctcgt gctcggcgcc ttcaacggca tcatggtctg gctcgtcggc
      361 atcccctcga tcgtggtgac gctgggtacg ctctcgatct accgaggtct ggccttcatc
      421 gcctcgggcg gcacctcgat cgtcggtcat ttgatgagcc ccggcttcat cgccgtgccg
      481 cgcatgcagg tgctgggcat cgccgccatg acctggttcg cggtgatcgt cgtcatcgtc
      541 atcgcgctgc tgctgcgcgt cacccgcatc ggccgcgcct tcttcgctgc cggcggcaat
      601 cccgtggctg cggtctatgc cggcatcaac gtccggcgca cgcagttcgt ggcgttctgc
      661 atctccggcg ccatctccgg gttctgcggc tacctctggg cctcgaaata caccatcgcc
      721 tatgtcgata tcgccagcgg cttcgagctg caggtgatcg ccgcctgcgt catcggcggc
      781 gtctcgatct cgggcggcat cggcaccgcc accggcgccg tgctcggcgc gctgttcctc
      841 ggcgtcgtca ccaacgcgct gccggtgatc cacgtctcgc cgttctggca gctcgcgatt
      901 tccggcatcg ccatccttgc ggcggtcatc atcaacaccg tccgcgagcg ccgcgtcggc
      961 cggctcgtgc tgcgcgaggc cgtcgtcaga tgaccgacca ggcgcctgcc gctcgcagca
     1021 tccccgaccg cctgtcgacg ggctccgcct ggtggaagcg ctgggagacg atcctcgtcg
     1081 tcgtcgcggt ggcgatcttc atcgccaact cgttcgcctc gccctacttc ctcgatccct
     1141 cgaacctgtc gctcgcgacc ttcaacttca ccgagacggc gatgatcggc ttcgccatgg
     1201 cgccgctgat cgtcgccggc gagatcgacc tgtcggtcgc cggcatcctg gcgctctcct
     1261 cgaccgccat gggcgccgct gccaccgccg gcgcgccgac cccgctgctg gtgctgatcg
     1321 gcctcgccgt cggcgtcgcc gccggcgccg tcaacggctt catcgtcacc cgctttcgcg
     1381 tgccttcgat cgtcgtcact atcggcacca tgagcctcta ccgcggcatc gcctatgtcg
     1441 tcctcggcga tcaggtctat cgcaaatatc cgcccgactt tgcctggttc ggccagggct
     1501 acgtggtctg ggtgttctcc ttcgagttcg tgctgttcct cgtcctcgcc atcgtcttcg
     1561 gcgtgctgct gcacctcacc accttcggcc gtcgcatcta cgccatcggc aacaatcccg
     1621 tcgccgcgca gttctcgggt gtccgcgtcg accgcatccg cttcacgctg ttcatgctga
     1681 ccggcctgat gagcggcgtc gccggcgtgc tgctgacctc gcgcatcggc tcgacccgcc
     1741 cgaccatcgc caccggctac gagctgcagg cgatcaccat ggtcgtcctc ggcggcgtca
     1801 acatcctcgg cggctccggc accatcctcg gcgtcgtcat cgccgccttc atcatgggtc
     1861 ttgtcacctt aggcctaggc ctgctgaacg tgcccggcat cgtccagtcg atcgtcaccg
     1921 gcgggctgct gatcgtcgtc atcgccatcc cgatcctgtg gaaccgctgg cggaggagcg
     1981 cgcggcaatg agcgaacatt acgccttcac catgcagctc aaccccggca tgaaggccga
     2041 gtacaagcag cgccacgacg agatctggcc cgagctcagc gcgctgctga aggaagccgg
     2101 cgtctccgac tactcgatct tcctcgacga ggcgaccggc accctgttcg gcgtcctcca
     2161 ccgcaccgcc ggccacacca tggccgactt gcccaatcac ccggtgatgc agcgctggtg
     2221 gacccacatg gccgacatca tggcgaccca ccccgacaac cgcccggtcg agacgccgct
     2281 cgagcctgtc ttccacatgg agtagggccg tggtcgtcgc ggtcatcgac atcggcaaga
     2341 ccaacgccaa ggtggcgctg gtcgacctcg cacggctgcg cgagacggcg atgcgcaaga
     2401 cccccaacgt cgtgcgcacc gacggacctt atccgcactt cgacgaagcg catctgtggg
     2461 agttcatcct cgactccctc cgcgacctcg gccgcgaggc gccgatcgag tccatctcga
     2521 tcaccaccca cggcgccacg gccgcgctgc tcgacgccga gggcaacctc gcgctgccga
     2581 tcctcgacta cgagttcacc ggcctcgaag ccctgaccga tgactacgac accgtccgcc
     2641 cgccgttcgc cgagaccggc acgccgcgcc tgcccggcgg cctcaacctc ggcgcgcagc
     2701 tgttctggca gcagcgcacg catccggcgg atttcgcccg cgccacgtcg atcctgatgt
     2761 acccgcaata ctggggcttc cgcctgaccg gggtccgcgc caacgaggcc acctcgctcg
     2821 gctgtcacac ggatttgtgg tcaccgcacc ggcgcacctt
//
LOCUS       DATAZA010000225         3718 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_373644, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000225 DATAZA010000000
VERSION     DATAZA010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3718
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_373644"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1713
                     /gene="acnA"
                     /locus_tag="VHZ56_05675"
     CDS             <1..1713
                     /gene="acnA"
                     /locus_tag="VHZ56_05675"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HEX4297493.1"
                     /translation="QGMFRDTQSPDPVFTDTLELDLGTVVPSVAGPKRPQDRVSLRDA
                     APKFAEALKDIAGGRQDRTKPPMSVGESRYVDEGATGVDDIPEEAAFPVKGSEFGIDD
                     GHVVIAAITSCTNTSNPSVLIAAGLVARKARARGLAVKPWVKTSLAPGSQVVTDYLQA
                     AGLQADLDALGFNLVGYGCTTCIGNSGPLPAAISECINDNDLVAASVLSGNRNFEGRV
                     NPDVRANYLASPPLVVAYALAGSLNVNVATDALGTGSDGKPVYLRDIWPSNEEVSEIV
                     RKVITPQMFLSRYSDVFKGDSNWQSIAVEGGETYRWNSSSTYVQNPPYFDDLKMEPDP
                     ITDVKDARILGLFLDSITTDHISPAGSFKASTPAGQYLVERQVAPKDFNSYGARRGNH
                     EVMMRGTFANIRIKNQMVPGVEGGYTKGPGGERMAIYDAAMAYQKTGTPLVIFAGKEY
                     GTGSSRDWAAKGTRLLGVRAVIAQSFERIHRSNLIGMGVLPLQFAEGESWQTLGLDGT
                     ETVSIEGLTGLTPRGAVTVRIVFADGRTREAVTRCRIDTVNELDYYRHGGILHYVLRN
                     LVAA"
     gene            1785..2150
                     /locus_tag="VHZ56_05680"
     CDS             1785..2150
                     /locus_tag="VHZ56_05680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297494.1"
                     /translation="MKIAHLAAVLPLLVAGCATSPKDIEAAYVSPVPYQAMTCQQLGQ
                     EAQRVSAAAAAATGQQQSQANKDAVAMGVSLIVFWPAIFFVGGDKTNAAQVAELKGEM
                     SAIQQVSVAKSCGIQFQPG"
     gene            2238..2966
                     /locus_tag="VHZ56_05685"
     CDS             2238..2966
                     /locus_tag="VHZ56_05685"
                     /inference="COORDINATES: protein motif:HMM:NF018473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1223 domain-containing protein"
                     /protein_id="HEX4297495.1"
                     /translation="MHSTSLLSAAMAAALLVAPAAAAEVREHPRAVVELFTSQGCSSC
                     PPADAKLRELGKQQDIIALAYHVDYWDYIGWPDTFGATGNTDRQKAYAQSWGSSMIYT
                     PELVVNGSKGVVGSRDSEVAAALSAASLALPVTLSLDGGTLEVGVGAQAGGANATIWL
                     VTFKDHAEVAIERGENAGQTMDYTQIVTGRQMLGIWDPVAGTHLKLPLSELMTKGANG
                     AVILVQADKGGLPGPILGAASVQL"
     gene            3324..3698
                     /locus_tag="VHZ56_05690"
     CDS             3324..3698
                     /locus_tag="VHZ56_05690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2794 domain-containing protein"
                     /protein_id="HEX4297496.1"
                     /translation="MAEADPKQHSAELVEFFSPSGPQPPRQKPYVGFDRRELDTILGL
                     YGRKVAAGEWRDYALDFLKDRALFSVYKRASERPLYVIEKNPKLRARQGQYMVTGQDG
                     RVLKRGHELAVVLRVLELTVVR"
BASE COUNT          622 a         1203 c         1319 g          574 t
ORIGIN      
        1 caggggatgt tccgcgacac gcagtcgccc gacccggtgt tcaccgacac gctggaactc
       61 gacctcggca cggtggtgcc ctcggtcgcc ggcccgaagc gtccgcagga tcgcgtgtcg
      121 ctgcgcgacg cggcgccgaa attcgccgag gcgctgaagg acatcgccgg cggccgccag
      181 gaccgcacca agccgccgat gtcggtgggc gagagccgct atgtcgacga gggcgcgacc
      241 ggggtcgacg acatcccgga ggaagcggcg ttcccggtca agggcagtga attcggcatc
      301 gacgacggcc atgtggtgat cgccgcgatc acctcgtgca ccaacacctc caatccctct
      361 gtgctgatcg cggcggggct ggtggcccgc aaggcgcggg cgcgcgggct tgcggtcaag
      421 ccgtgggtca agacctcgct ggcgccgggc tcgcaggtgg tcaccgatta tctgcaggcg
      481 gcggggctgc aggccgacct cgacgcgctc ggcttcaatc tcgtgggcta tggctgcacc
      541 acctgtatcg gtaattccgg gccgctgccg gcggcgatct cggagtgcat caacgacaac
      601 gacctcgtcg ccgcctcggt gctgtcgggc aaccgcaatt tcgagggccg ggtgaacccc
      661 gacgtgcgcg ccaactatct cgcctcgccg ccgctggtgg tggcctacgc gctggccggc
      721 tcgctcaacg tcaacgtcgc gaccgacgcg ctcggcaccg gcagcgatgg caagccggtg
      781 tatctgcgcg acatctggcc ctcgaacgag gaagtcagcg agatcgtgcg caaggtgatc
      841 acgccgcaga tgttcctttc ccgctactcg gacgtgttca agggcgacag caactggcag
      901 tcgatcgccg tcgagggcgg cgagacctac cggtggaaca gcagttcaac ctatgtgcag
      961 aacccgccct atttcgacga cctgaagatg gagcccgacc cgatcaccga cgtcaaggac
     1021 gcgcgcatcc tcggattgtt cctcgattcg atcaccaccg accacatctc gccggcgggc
     1081 tcgttcaagg cctcgacgcc ggccggccag tacctggtcg aacggcaggt ggcgccgaag
     1141 gatttcaact cgtacggagc ccggcgcggc aaccacgagg tgatgatgcg cggcaccttc
     1201 gccaacatcc gcatcaagaa ccagatggtg cccggtgtag aaggcggtta caccaagggg
     1261 ccgggcggcg aacggatggc gatctacgac gcggcgatgg cctaccagaa gactggaacg
     1321 ccgctcgtca tcttcgccgg caaggaatac ggcaccggct cgtcgcgcga ctgggcggcc
     1381 aagggtacgc ggctgctggg cgtgcgggcg gtgatcgcgc aatcgttcga gcgcatccac
     1441 cgctccaacc tcatcggcat gggcgtgctg ccgctgcagt tcgccgaggg cgagagctgg
     1501 cagacgctgg ggctcgacgg caccgagacg gtgtcgatcg aagggctcac ggggctgacg
     1561 ccgcgcggcg cggtgacggt gcgtatcgtc tttgccgacg ggcggaccag ggaggcggtg
     1621 acgcgctgcc gcatcgatac ggtgaacgag ctcgactact accggcacgg cggcatcctc
     1681 cactacgtgc tgcgcaacct cgtcgcggcg tgagtaggta gtcgtcccaa gcggcgaggg
     1741 ccgcgcattt gcgctgatgt ccccggggtt tgctgggggc atccatgaaa attgcacatc
     1801 tggcggcagt gctgccgctc ctcgtcgccg gttgcgcgac gagcccgaag gacatcgagg
     1861 cggcctatgt ctcgccggtg ccgtaccagg cgatgacctg ccagcagctg ggccaggagg
     1921 cgcagcgggt ttcggccgcg gcggcggcgg cgaccggcca gcagcagagc caggccaaca
     1981 aggatgcggt ggcgatgggg gtcagcctga tcgtgttctg gccggcgatc ttctttgtcg
     2041 gcggcgacaa gaccaacgcg gcgcaggtgg ccgagctcaa gggcgagatg agtgccatcc
     2101 agcaggtgag cgtggcgaaa tcgtgcggca tccagttcca gccggggtga ggcggcggcg
     2161 cgccggccgg gccgggtcac ccggctgaca cgtcaatttg actcgcagtt caacggcgct
     2221 ttgcctagaa aagcgccatg cactcgacgt cactcctttc cgccgcgatg gcggccgcgc
     2281 tgctggttgc gcccgccgct gcggcagagg ttcgcgagca tccgcgcgcc gtggtggagc
     2341 tgttcacctc gcagggctgc tcgtcgtgcc cgccggccga cgccaagctg cgcgaactgg
     2401 gcaagcagca ggacatcatc gcgctcgcct accacgtcga ctactgggac tatatcggct
     2461 ggcccgacac gttcggcgcc accggcaaca ccgaccggca gaaggcctat gcgcagagct
     2521 ggggctcgtc gatgatctat acgcccgagc tggtggtcaa cggcagcaag ggcgtggtcg
     2581 gctcgcgcga cagcgaagtc gccgcggcgc tgagcgcggc gagcctggcg ctgccggtga
     2641 cgctgtcgct cgatggcggc acgctcgagg tcggcgtcgg ggcgcaggcc ggcggcgcca
     2701 acgcgacgat ctggctggtg acgttcaagg accacgccga agtggcgatc gagcgcggcg
     2761 agaatgccgg ccagaccatg gattacacgc agatcgtcac cggccggcag atgctgggga
     2821 tctgggatcc ggtggccggc acgcacctca agctgccgct cagcgaactg atgaccaagg
     2881 gcgccaatgg cgcggtgatc ctggtgcagg ccgacaaggg cgggctgccc gggccgatcc
     2941 tcggcgcggc ctcggtccag ctctaggctt ttcccagtcg ccaaaacaaa actcccgccg
     3001 gctgggctgg cgggagtttt gaatgactgt gcatgtgagg atgcagctgg caccgggcat
     3061 catggtttgg gggctcggtc agcccggtgc cagccgctgg aggcaatgac cgaaccttgc
     3121 cggtccaatc gggccgaagc ggggacacaa tgtgtccaaa cttgggaaaa atggctgggg
     3181 ccaaacgggc cgcaaatggc ggatttccgc aggtttgcgg gtggtccgca gagcgcggtc
     3241 gcggtcgccg gcgcgtcatc gccccggctt gcgtcggcgg ggattctcgc cgatcatgac
     3301 accggtgtca tgaaggatgg cggatggccg aggccgatcc caagcagcat tccgcagagc
     3361 tggtcgagtt tttctccccg agcgggccgc agccgccgcg ccagaagccc tatgtcggat
     3421 tcgaccggcg cgagctcgac accatcctcg ggctctatgg ccgcaaggtc gcggccggcg
     3481 agtggcgcga ctacgccctc gacttcctca aggaccgggc gctgttctcg gtctacaagc
     3541 gggcatccga gcggccgctg tacgtcatcg agaagaaccc gaagctgcgg gcgcggcagg
     3601 gccagtacat ggtcaccggc caggacggcc gggtgctgaa gcgcgggcac gagctcgccg
     3661 tcgtgctgcg ggtgctcgag ctcaccgtcg ttcgctaggg gacgcgaggc taggcgcg
//
LOCUS       DATAZA010000226         2746 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3390895, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000226 DATAZA010000000
VERSION     DATAZA010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2746
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3390895"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VHZ56_05695"
     CDS             <1..244
                     /locus_tag="VHZ56_05695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018064254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEX4297497.1"
                     /translation="LRDEAHRFAIGTHRARRKKDFVSNPLDEIDGIGPTRKRALLQHF
                     GSAKAVSRASLADLAAIPGISNAMAQLVYDHFNRGG"
     gene            complement(263..1948)
                     /locus_tag="VHZ56_05700"
     CDS             complement(263..1948)
                     /locus_tag="VHZ56_05700"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4297498.1"
                     /translation="MPTEMKNHKWMVLSNTTLGMLAATINASIVLISLPAIFRGIDLK
                     PLDPGNTNILLWTIMGYMVVTSVLVVTFGRLGDMFGRARIYNLGFLIFTLASILLSFI
                     PTGNFGGYYLVGMRVLQGVGGAMLTATSTAILIDVFPPKQRGLALGINIMAAIAGQFI
                     GLVLGGLLADIDWHLVFYINIPVGVIGTAWAYFSLKDVGLDRKHGRLDWGGNVTFAVG
                     LILILVGINDGIQPYGHDLMSWGSPRVLGEIGLGIVMLALFLFIETRVDSPMIDLKLF
                     RIRAFTTGVLATLSGSIGRGGLQFMLIIWLQGIWLPLHGYSFESTPLWAGIFMLPLTV
                     GVLLVGPVSGWLSDRYGPKLFAAGGMTLGALTFLGLMLLNADFVYWMFAGLLFLNGVG
                     SGLFSAPNGTQTMNAVPAAERGQASGIRATAMNAGVVLSIGVFFTLMIIGLAVALPAS
                     MQSALVAQGLPQAVAAQVAAEPPVASLFAAFLGYNPMGELIPADALHALTAAQQATIT
                     GPQFFPQLLAGPFMVGIKIAFSISIVLYLLAALSSWLGAAARVQSAGDAIPAE"
     gene            2020..2478
                     /locus_tag="VHZ56_05705"
     CDS             2020..2478
                     /locus_tag="VHZ56_05705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX4297499.1"
                     /translation="MATDEDAYLLRDLTRNLLRAGRLWRKMARRAASEHGVSEAASSP
                     LLVIARMGENVRQNTLAEAVGIEGASLVRLLDELQASGLITRVPDPNDRRANAVNLTP
                     RGETVVAEVNEVLTALRLDVFAAVPRQEAEAAMRVCAAIEAAAAKMVGAE"
BASE COUNT          509 a          988 c          846 g          403 t
ORIGIN      
        1 cctgcgcgac gaagcccacc gcttcgccat cggcacccat cgcgccaggc gcaagaagga
       61 tttcgtctcc aacccgctcg acgagatcga cggcatcggt ccgacccgca agcgcgccct
      121 gctgcagcat ttcggctcgg cgaaggcggt cagccgcgcc tcgctcgccg acctcgccgc
      181 cattcccggc atctccaatg ccatggcgca actggtctac gatcacttca accgcggcgg
      241 ttgacgccgc cgcggcgtcc gctcattcgg cggggatcgc gtcgcccgcc gactgcacgc
      301 gcgccgctgc gccgagccac gacgacagcg ccgccagcag gtagagcacg atcgagatcg
      361 agaacgcgat cttgatgccc accatgaacg gccccgcgag caattgcggg aagaactgcg
      421 gcccggtgat cgtcgcctgc tgcgccgccg tcagcgcatg cagcgcatcg gccgggatca
      481 gctcgcccat cgggttatag ccgaggaacg ccgcgaacag gctcgccacc ggcggctccg
      541 cggcgacctg tgccgccact gcctgcggca gcccctgcgc gaccagcgcc gactgcatcg
      601 aggccggcag cgccaccgcc agcccgatga tcatcagcgt gaagaacacg ccgatcgaca
      661 gcaccacgcc ggcattcatc gccgtcgccc ggatgcccga agcctggccg cgctcggcgg
      721 ccggcacggc gttcatcgtc tgcgtcccgt tcggcgccga gaacagcccc gagccgacgc
      781 cgttgaggaa cagcagcccg gcgaacatcc agtagacgaa gtcggcattg agcagcatca
      841 gcccgaggaa ggtcagcgcc cccagcgtca tgccgccggc cgcgaacagc ttcggcccgt
      901 agcggtcgct gagccagccc gagaccggcc cgaccagcag cacgccgacc gtcagcggca
      961 gcatgaagat gccggcccac agcggcgtcg attcgaagct gtagccgtgc agcggcagcc
     1021 agatgccctg cagccagatg atcagcatga actgcagccc gccccgtccg atcgagcccg
     1081 acagcgttgc cagcaccccg gttgtgaacg cccggatgcg gaacagcttc aggtcgatca
     1141 tcggcgagtc gacgcgcgtc tcgatgaaca ggaacagcgc cagcatgacg atgccgaggc
     1201 cgatttcccc cagcacccgc gggctgcccc acgacatcag gtcgtggccg tacggctgga
     1261 tgccgtcatt gatgccgacg aggatcagga tcaggcccac ggcgaacgtc acattgccgc
     1321 cccagtcgag ccggccatgc ttgcggtcga gcccgacgtc cttgaggctg aaatacgccc
     1381 aggccgtgcc gatcaccccg actggaatat tgatatagaa caccaggtgc cagtcgatat
     1441 cggccagcag gccgcccagc accaggccga tgaactgccc ggcgatcgcc gccatgatgt
     1501 tgatgcccag cgccagcccg cgctgcttgg gtggaaacac gtcgatcagg atcgccgtcg
     1561 aggtcgccgt cagcatggcg ccgccgacgc cctgcagcac ccgcatgccc accaggtagt
     1621 agccgccgaa attcccggtt ggaatgaagc tcagcaggat cgacgccagc gtgaagatca
     1681 agaagccgag attgtagatc cgcgcccgcc cgaacatgtc gccgagccgg ccgaacgtca
     1741 ccaccagcac cgaggtcacc accatgtagc ccatgatggt ccacaacagg atgttggtgt
     1801 tgcccggatc gagcggcttc aaatcgatgc cgcggaagat tgccggcagg ctgatgagca
     1861 cgatcgacgc attgatggtg gcggccagca ttccgagggt ggtgttgctc agcaccatcc
     1921 atttgtggtt cttcatctcg gtaggcatct aggaattccg gagcggcggc cggattgccg
     1981 ccagcgaaca gctgaaccgt atagttagga tgctaacaat tggcaactga cgaggacgca
     2041 tatctgctgc gcgatctgac gcgcaatctg ctgcgcgccg gccggctgtg gcggaagatg
     2101 gcgcgccgcg ccgcctccga gcacggcgtt tccgaggccg cctcctctcc cctgctggtc
     2161 atcgcgcgca tgggcgagaa cgtccgccag aacaccctgg ccgaagccgt cggcatcgag
     2221 ggcgcctcgc tggtgcgcct tctcgacgag ctgcaggcct ccggtctcat cacccgcgtc
     2281 cccgatccca acgaccgccg cgccaacgcc gtcaacctga cgccgcgcgg cgagaccgtc
     2341 gtcgccgagg tcaacgaggt gctgaccgct ctgcggctcg acgtcttcgc cgccgtcccg
     2401 cgccaggagg ccgaggcggc catgcgcgtc tgtgccgcca tcgaggccgc cgctgcgaag
     2461 atggtcgggg cggagtgaca cggccccacg gctgcgctac aaccccggca tgaacctcgt
     2521 ccgcgccacg ttttcgtatt ggtattttag caacggaagc cgctggcagc cggaggggcg
     2581 cgtttgatct gacaccgtca aacaagagtt tcccgaagcc gccagcgact ggcggctttt
     2641 ttgtcgccgg tccccacccc tcccatggac ctgcaaaaat gctcaaatcc accgacgacc
     2701 tccgcatccg cgacatccgc gaactccgca cgcccgccga ggtgat
//
LOCUS       DATAZA010000227         9186 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2927125, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000227 DATAZA010000000
VERSION     DATAZA010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 9186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9186
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2927125"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1032
                     /locus_tag="VHZ56_05710"
     CDS             <1..1032
                     /locus_tag="VHZ56_05710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297500.1"
                     /translation="AAGSELPAGVLTALEGLGKIAVPEAPVLPPLAIAPVDEAPPPPV
                     AVEIVPIVADPAPAWPEPRLEPAPLAKPPQQETEAPPPPVEAPMPQARPAEPPTPTSR
                     AGIAWAGAIRGHAAPDLEVGAAATTVLPEPAAALPPASGVPEPEPPPPPMVAEVPSVE
                     APTTATVLDPPAAEPAEPASAPSAPVPVPVVVDDEDAAMRAIEGGWSRRDAPPLPGRP
                     ESLDVGAAVAKAQTAVEDALARNGVEAAEPSFRANAAFGRPVGLPRARDGARDDLKRI
                     DGLRQLDESALNNLGIFHFDQVAAWDQREVLWLENHAFAVGRIGRERWQEQARLLEGE
                     RPSSRFAQL"
     gene            complement(1029..1964)
                     /locus_tag="VHZ56_05715"
     CDS             complement(1029..1964)
                     /locus_tag="VHZ56_05715"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX4297501.1"
                     /translation="MARVRFVPPDHKAFAALPVRLVTVGRATEQLAVHAMGRLGPART
                     PIVCVPGYNRNMADYADFARLAGQLLSDDNPVVLVDLKGRGRSSDRPRMAEYSSLADA
                     ADVVEITRALGIERAVFVGQGSGGQVLMGLAAVRPSLIAGTVLVDAGPVSDSRGLVRL
                     RHTLHDLTGVRGEASLRPMLRRMVAADYPGTPEAALDELAMRTHYVDGRGRLQPLFDP
                     ALIKLLEPFELDDVLVAQWPLFDALAAAPLMMMRTQLTQQLRRETFEEMMRRRRDAEA
                     FVIESQGSPALLDNIEDVQPIVDFVKQVAGTKKAA"
     gene            complement(1998..4046)
                     /locus_tag="VHZ56_05720"
     CDS             complement(1998..4046)
                     /locus_tag="VHZ56_05720"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEX4297502.1"
                     /translation="MLIWLRRPGRLLSGSFAAALIVALSYSAPAVPATEGVDPVVTGS
                     IDPAGADVAAVVAQGSPEFRAALALVTGGKFADAYAAGAALKSDVERHTIEWASIYYG
                     GGGVAYGAVQDFAAEAPDFASAGVFRTRIEQALVKTDAPEDVLIKTLGGSMPNTLAAE
                     IALGKAYADTGDKVRAASIARTIWVDDFLDQDSETKVLAALGGLLTAKDHWDRAEHLM
                     MNDRASAVERLYQFMSPGEKSLAVARVAVIRDAPNARKLLDAVDKAYQTNPIYYFSRA
                     ERAAGAQLWDDAIAYLNKGKATDPDAEQWWYERRTVIQQLLSSGDAQRAYRVAAGYIH
                     GPEGRLVEARFQAGWIALSFLHEPKAAVTHFEAMAKLSTLPDSVTQANYWLGRAEAGA
                     GDTKAAKAAYGAAAAYGTIYYGLLARAELGMPAVQLRPMPSGIDDGATFEARPVVQAI
                     DLLAANGQTDMAGALMRTLAQSLKSSSDFVLAARLAQKIDAHHLAISIADIADKRGVP
                     LDLFSFPKDGLPTAKLADVDMAAIYAITRTESRFQTDAVSSSGARGLMQLMPSTAKET
                     AQKMGIAYSASRLTSDPEYNAQLGSSYLATQLQAYNGSLLLAAAAYNAGAGNANKWIT
                     AFGDPRAANVDPVLWVELIPFQETRKYVQRVLGNYLVYRARLGGAEISPTEALRSIAG
                     "
     gene            4327..5205
                     /gene="dapA"
                     /locus_tag="VHZ56_05725"
     CDS             4327..5205
                     /gene="dapA"
                     /locus_tag="VHZ56_05725"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEX4297503.1"
                     /translation="MLRGSITALITPFADGAVDEKAFGAFVDWQIREGSHGLVPVGTT
                     GESPTVTHEEHRRIIEICVDVADRRVPVIAGAGSNSTDEAVSLARFAEDVGADAVLSV
                     VPYYNKPTQEGLFQHFSAVARATALPILLYSVPGRTVVDLTVETIVRLRDAHANIVGV
                     KDATASMERISMERAKLGPDFVLLSGEDMTALGFMAHGGHGCISVTSNVAPKLCAQFQ
                     NACMQGNFSAALMLQDKLVQLHKTLFLENNPGGIKYAVSRLGLCRNEFRLPVVPIGRP
                     NEEAIDGAMSFAGLLN"
     gene            5330..5785
                     /gene="smpB"
                     /locus_tag="VHZ56_05730"
     CDS             5330..5785
                     /gene="smpB"
                     /locus_tag="VHZ56_05730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEX4297504.1"
                     /translation="MIVTGPVAENRRARYDYEILDTLEAGIMLTGTEVKSLRIGKAQI
                     TESYASPERGELWLINAHIPEYLQANRFNHEEKRPRKLLVSKQELARLREGVERAGNT
                     IVPLKLYFNEHGKAKLLIGLAKGKKSFDKREVEKNRDWNREKSRLLKHG"
     gene            complement(5790..6425)
                     /locus_tag="VHZ56_05735"
     CDS             complement(5790..6425)
                     /locus_tag="VHZ56_05735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEX4297505.1"
                     /translation="MTATVPPHDCPLCPRLVAFREEARRLHPDWHNAPVPYWGAPRPR
                     LIIVGLAPGLKGANRTGRPFTGDYAGDLLYATLRKFGLASGDYEMRPDDGLELRQTLI
                     ANAVACVPPENKPTTEEIRTCRQFLVARLHEERPRAYLALGRIAHDSLLVTLGEKRSA
                     RPFGHGAEHVLTGGATLFDSYHCSRYNTNTGVLTTAMFEDVVGRAARFIAD"
     gene            complement(6445..7059)
                     /locus_tag="VHZ56_05740"
     CDS             complement(6445..7059)
                     /locus_tag="VHZ56_05740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008196956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEX4297506.1"
                     /translation="MSIDAREKVVLFIDGANLYATSKAIGVDIDYRRLLAEFQSKAYL
                     LRAYYYTALVEDQEYSSIRPLIDWLDYNGFTVVTKPAKEFTDAAGRRKIKGSMDIELT
                     VDALEMSPFFDHFVLFSGDGDFTALVAALQRRGKRVTVASTLTTPTPMISDDLRRQAD
                     FFLDVAELAKTVGRASDRSGERNTERSAERSVDRAPVSADDRVK"
     gene            7331..7699
                     /gene="rpoZ"
                     /locus_tag="VHZ56_05745"
     CDS             7331..7699
                     /gene="rpoZ"
                     /locus_tag="VHZ56_05745"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEX4297507.1"
                     /translation="MARVTVEDCIEKIDNRFDLVLLAAHRARMISAGASITVDRDNDK
                     NPVVSLREIGDGAISPEDLREDLIHSLQKYVEVDEPEKHAAPLLDANADENSDTFDTL
                     SEDELLRGIESLAPPERRDD"
     gene            7801..>9186
                     /locus_tag="VHZ56_05750"
     CDS             7801..>9186
                     /locus_tag="VHZ56_05750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019444226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0015968 - stringent response [Evidence
                     IEA];
                     GO_process: GO:0015969 - guanosine tetraphosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RelA/SpoT family protein"
                     /protein_id="HEX4297508.1"
                     /translation="MMRQYELVERVQAYNPHADEQLLNKAYVYAMQKHGSQKRASGDP
                     YFAHPLEVAAILTDLKLDDATVAVGLLHDTIEDTDATRAEIDQLFGSEIGEIVDGLTK
                     IERLQLVTREEAQAENLRKLLLAISADVRVLLVKLADRLHNMRTLDFMPPDKQRRIAE
                     ETMDIYAPLAGRMGMQDMRSELENLAFRTLQPDHYKAITDRLAERQAEFKETIETITT
                     ELTTRLKAEGIEARVSARVKSAWSIATKIDRKQIALEQLSDMIGFRIIVPTIADCYRA
                     LGIVHTNWKVVPGRFKDYISVPKHNDYRSIHTTIVGLGRQRIELQIRTEEMHRIAEYG
                     IAAHALYKDGGTGDLHHLEGESQAFAWLRQTIEHLTSGASAEDFLEYTKLELFQDQVF
                     CFTPRGRLIALPRGASPIDFAYALHTDIGDTTVGAKINGAIVPLVTHLQSGDEVEIIR
                     DQNHLPPANWET"
BASE COUNT         1530 a         3212 c         2982 g         1462 t
ORIGIN      
        1 gccgccggca gcgagttgcc ggccggggtg ctcaccgcct tggaagggct gggcaagatc
       61 gccgttccag aggcgccggt cctgccaccg ctggctatcg ccccggtgga cgaggcgcct
      121 ccgccgcccg ttgccgtcga gatcgtgccg attgtcgccg acccggcgcc ggcgtggccc
      181 gagccgcggc tggagcctgc accgctggcc aagccgccgc agcaggagac ggaggctcca
      241 cctccgccgg tcgaggcgcc gatgccgcag gcgcggccgg ccgagccgcc gacgcccacg
      301 agtcgtgccg gcatcgcctg ggccggtgcg atccggggtc acgctgctcc ggacctggag
      361 gtgggcgcgg cagcgacgac tgttctgccg gagccggctg ccgcgttgcc gcctgccagt
      421 ggcgtgccgg agcccgagcc gcccccacca ccgatggtcg ctgaggttcc gagcgtcgag
      481 gccccgacca cagcgacggt tctcgatcca cccgcagcgg aaccggcgga gcctgcgtcc
      541 gcaccgagcg cgcccgtgcc cgtgcccgtc gtcgtcgatg acgaggacgc ggcgatgcgc
      601 gccatcgagg gcggctggtc ccggcgcgac gcgccgccgc ttcccggccg cccggaaagc
      661 ctcgatgtcg gcgccgccgt cgccaaggcg cagaccgccg tcgaggatgc actggcccgc
      721 aatggcgtcg aggccgccga accctcgttc cgtgcgaatg ccgcattcgg ccgccccgtc
      781 ggcctgccgc gggcgcgcga cggggcccgc gacgacctca agcgcatcga cgggctgcgc
      841 cagctcgatg aatcggccct caacaatctt ggcattttcc atttcgacca ggtcgctgcc
      901 tgggaccagc gcgaagtcct ctggctcgaa aaccacgcct tcgcggtggg ccgcatcggc
      961 cgcgagcgct ggcaggagca ggcgcggctg ctggagggcg agcggccgtc atcgcgcttc
     1021 gcccagctct aggctgcctt cttcgtcccc gcgacctgct tcacgaaatc gacgatcggc
     1081 tgcacgtcct cgatgttgtc gaggagtgcc ggcgacccct gcgattcgat gacgaacgcc
     1141 tcggcatcgc gccgccgccg catcatctcc tcgaacgtct cgcgccgcag ctgctgggtc
     1201 agctgcgtcc gcatcatcat cagcggcgcg gctgccaggg cgtcgaacag cggccactgg
     1261 gccaccagca cgtcgtcgag ttcgaacggc tcgagcagct tgatcagcgc cggatcgaac
     1321 agcggctgca gccgtccacg gccgtcgacg tagtgcgtcc gcatcgccag ctcgtcgagc
     1381 gccgcttcgg gcgttccggg atagtccgcc gcgaccatcc gccggagcat cggcctgagg
     1441 ctggcctcgc cgcggacgcc ggtcaaatcg tgcagcgtat ggcgcagccg caccagcccg
     1501 cgggagtccg acaccggacc ggcatcgacc agcacggtgc ccgcgatcag cgacggccgc
     1561 accgccgcca gccccatcag cacctgtccg cccgaaccct ggccgacgaa caccgctcgt
     1621 tcgatgccga gcgcgcgggt gatctcgacc acgtccgccg cgtcggcgag cgaggagtac
     1681 tcggccatcc gcggccggtc cgacgatcgg ccgcgcccct tgaggtcgac cagtaccacc
     1741 ggattgtcgt cgctcagcaa ctggcccgcg agccgcgcga aatcggcgta gtcggccatg
     1801 ttgcggttgt agcccggcac acacacgatc ggcgtgcgcg ctgggccgag gcgacccatc
     1861 gcgtgcaccg caagctgctc ggtcgcccgg cccaccgtca cgaggcgcac gggcagggcg
     1921 gcgaacgcct tgtggtcggg cgggacgaag cgaactctgg ccatgccgat actcatagcc
     1981 gagcggcgag gggccgccta tccggcgatc gagcgcagcg cctccgtcgg gctgatctcg
     2041 gcgccgccca accgagcccg gtagacgagg tagttgccca gcacgcgctg cacgtatttc
     2101 cgcgtttcct ggaacgggat cagttcgacc cacagcaccg gatcgacgtt ggcggcgcgc
     2161 gggtcgccga atgccgtgat ccacttgttg gcgttgccgg cgccggcgtt gtaggcggcc
     2221 gccgcaagca gcagcgagcc attgtaggcc tgcagctgcg tcgcgaggta actggagccg
     2281 agctgcgcgt tgtattcggg gtcgctggtc agccggctgg cggaataggc gatccccatc
     2341 ttctgcgcgg tttccttggc ggtgctcggc atcagctgca tgagcccccg cgccccgctc
     2401 gagctgaccg cgtcggtctg gaaccggctc tcggtccggg tgatcgcata gatcgcggcc
     2461 atgtcgacat ccgcgagctt ggcggtaggc aggccgtcct tgggaaagct gaacaggtcg
     2521 agcggcacgc cccgcttgtc ggcgatgtcg gcgatcgaaa tcgccagatg gtgcgcgtcg
     2581 atcttctgcg ccagcctcgc cgccagcacg aagtcgctgc tcgacttgag cgactgcgcc
     2641 agcgtgcgca tcagcgcgcc ggccatgtcc gtctggccgt tcgcggccaa cagatcgatc
     2701 gcctgcacca ccggccgcgc ctcgaacgtc gcgccatcgt cgatgcccga cggcatcggc
     2761 cggagctgca cggccggcat gccgagctcc gcgcgggcca ggaggccgta gtagatcgtg
     2821 ccgtaggcgg cggccgcacc ataggccgcc ttggcggcct tggtgtcgcc ggcgcccgct
     2881 tcggcgcggc cgagccagta attggcctgc gtcaccgagt cgggcagcgt cgagagcttc
     2941 gccatcgcct cgaaatgcgt caccgccgcc ttgggctcgt ggaggaagct cagcgcgatc
     3001 cagcccgcct ggaagcgggc ttcgaccagc cggccctccg gtccgtggat atagcctgcc
     3061 gccacccggt aggcgcgctg cgcgtcgccg ctcgacagca attgctggat caccgtgcgc
     3121 cgctcatacc accactgctc ggcgtccggg tcggtcgcct tgcccttgtt gagataggcg
     3181 atggcgtcgt cccagagctg cgccccggcg gcccgctcgg cccgcgagaa atagtagatc
     3241 gggttcgtct ggtacgcctt gtccaccgcg tcgagcagct tcctggcgtt cggcgcgtcg
     3301 cggatgacgg ccacccgcgc caccgccagc gacttctcgc cggggctcat gaattggtag
     3361 agccgctcga ccgcactcgc gcggtcgttc atcatcaggt gctcggcgcg gtcccagtgg
     3421 tccttggcgg tgagcagtcc tcccagcgcc gccagcacct tcgtctcgct gtcctggtcg
     3481 aggaaatcgt cgacccagat cgtccgcgcg atgcttgccg cccgaacctt gtcgccggtg
     3541 tcggcgtagg ccttgccgag cgcgatctcg gccgccagcg tgttgggcat cgacccgccc
     3601 agtgtcttga tcagcacgtc ctcgggggcg tcggtcttga ccagcgcctg ctcgatgcgg
     3661 gtcctgaaca ctccggcgct ggcgaagtcc ggcgcctcgg cggcaaagtc ctgcaccgcg
     3721 ccgtaggcca cgccgccgcc gccgtagtag atcgaggccc attcgatggt gtgccgctcg
     3781 acgtcgctct tgagcgctgc gccggccgcg taggcatcgg cgaacttgcc gccggtcacc
     3841 agcgccaggg cggcgcgaaa ctcgggcgac ccctgcgcca cgacggcagc gacgtccgcg
     3901 ccggcgggat cgatcgagcc ggtgacgacc gggtcgacgc cttcggtcgc cggaaccgcg
     3961 ggtgccgaat agctgagagc aacgatgaga gcggcggcaa agctgccgct gaggagccgg
     4021 cccggccgcc tcagccaaat caacatggtg tcgtcctgtt ggtcctcaat acgtgtccaa
     4081 caaggtgccc ccacccttgc ggcttcggag tgtcgccccg cagggtgaaa aatccgttgc
     4141 cgttcagccg tcgccggcgc tgcccgcgcc cgcaactgcc tcgttgggtc gcccggcggc
     4201 tctctgcttg tcgcgccgga caactgaaac tatggtgcgc gactatggcc aaagggcgga
     4261 aaagccgcgg ccacaatctg tcatccggcc aggggccggg tcgcgaaacc gaggaaacat
     4321 cccgaaatgc tcagaggctc gatcacggcg ctcatcactc cgtttgccga cggtgccgtg
     4381 gacgagaaag cgttcggggc cttcgtcgac tggcagatcc gggagggcag ccacggcctc
     4441 gtgccggttg gaacgaccgg cgaaagcccg acggtcaccc acgaggaaca ccggcgcatc
     4501 atcgagatct gcgtcgatgt cgccgaccgt cgggtgccgg tgatcgcggg tgcgggttca
     4561 aactcgaccg acgaagccgt ctcgctggcg cgctttgccg aggatgtcgg cgcggatgca
     4621 gtgctgtcgg tcgtgcccta ctacaacaag ccgacgcagg aggggctgtt ccagcatttt
     4681 tccgctgtgg cccgggccac ggctctgccc atcctgctct attccgtgcc gggccggacc
     4741 gtggtcgacc tcaccgtcga aaccatcgtt cgccttcgcg atgcgcatgc caatatcgtc
     4801 ggcgtcaagg acgcgacggc cagcatggag cgtatctcca tggagcgcgc caagctcggc
     4861 cccgatttcg tcctgctctc gggcgaggac atgaccgcgc tcggcttcat ggcgcacggc
     4921 gggcacggct gcatctcggt caccagcaac gtcgcgccga agctctgcgc gcagttccag
     4981 aacgcctgca tgcagggcaa tttctccgcc gccctgatgc tccaggacaa gctggtgcag
     5041 ctgcataaaa cgctgttcct cgagaacaac ccgggcggca tcaagtacgc ggtgtcgcgg
     5101 ctcgggctct gccgcaacga gttccgcctg ccggtcgtgc cgatcgggcg ccccaacgag
     5161 gaggcgatcg acggcgccat gtcgttcgcg gggctgctga actagcccag ccatgatgtc
     5221 gtccccgcga aagcgggaac ccgtttgcct tctggatata ttcccgcttt cgcaggaacg
     5281 acgctgccac tatctgtgag ccatgcctaa agcgcccaac aaacccgcga tgatcgtcac
     5341 cggtccggtg gccgagaacc ggcgggcccg ctacgactac gagattctcg acaccctcga
     5401 ggccggcatc atgctgaccg gcaccgaggt caagtcgttg cgcatcggca aagcccagat
     5461 caccgaaagt tatgcttcgc cggagcgcgg cgagctctgg ctgatcaatg cccatatccc
     5521 cgaatacctg caggccaacc gcttcaacca cgaggagaag cggccgcgga agctgctggt
     5581 gtcgaagcag gaactggccc ggctgcgcga aggcgtcgag cgggccggca acaccatcgt
     5641 gccgctgaaa ctctatttca acgagcatgg caaggcgaag ctgctgatcg gtctcgccaa
     5701 gggcaagaaa agcttcgaca agcgcgaagt cgaaaagaac cgcgactgga accgcgagaa
     5761 atcgcggctg ctgaagcacg gctgatggct cagtcggcga tgaacctcgc cgcccgcccg
     5821 accacgtcct cgaacatcgc cgtcgtcagc acgcccgtgt tcgtgttgta gcgggagcag
     5881 tggtagctgt cgaacagcgt cgcgccgcca gtcagcacat gttcggcgcc gtggccgaac
     5941 ggacgcgccg agcgcttctc gcccagcgtg accagcaatg aatcgtgggc gatgcgtccg
     6001 agcgccaggt aggcccgcgg ccgctcctcg tgcagccgcg ccacgaggaa ctgccggcac
     6061 gtcctgatct cttcggtcgt cggcttgttc tcgggcggca cgcaggccac ggcgttggcg
     6121 atcagcgtct ggcgcagctc gaggccgtcg tccggccgca tctcgtaatc gccgctcgcc
     6181 agcccgaact tccgcagcgt ggcgtagagc aggtcgccgg catagtcgcc ggtgaacggc
     6241 cgcccagtgc ggttggcgcc cttcagcccc ggcgccagcc cgacgatgat gaggcgaggg
     6301 cggggcgccc cccagtaagg cacgggagca ttgtgccagt ccggatgcag ccgtcgcgcc
     6361 tcctcgcgga aagcgacgag acgcggacag agcggacagt cgtgcggcgg aacggtcgcg
     6421 gtcaaatcaa ccggaaagcg ggactcattt cacccgatcg tcggcggaga ccggcgcgcg
     6481 gtcaacgctg cgttcggccg agcgctcggt attccgctcg cccgagcggt ccgaagcccg
     6541 gccgacggtt ttggcgagtt cggcaacgtc gaggaagaag tccgcctgcc ggcgcaggtc
     6601 gtcggaaatc atcggggtag gagtggtcag cgtcgaggca acggtcacgc gcttgccgcg
     6661 ccgctgcagc gcggcaacca gcgccgtgaa atcgccatct cccgaaaaca gcacgaaatg
     6721 gtcgaagaac ggcgacatct cgagcgcgtc caccgtcaac tcgatgtcca tgctgccctt
     6781 gatcttccgt cgcccggcgg cgtcggtgaa ctccttggcg ggcttggtga ccacggtaaa
     6841 gccgttgtag tcgagccagt cgatcagcgg gcggatcgag gaatactcct gatcctcgac
     6901 cagcgccgtg tagtagtagg cgcgcagcag ataggccttg gactggaact cggcgagcag
     6961 ccgccggtag tcgatgtcga cgccgatcgc cttgctggtc gcgtaaaggt tcgcaccgtc
     7021 tatgaaaagc acgacctttt cgcgcgcgtc gatcgacatg gcttttctcc tgactgggtt
     7081 ggccggcctc tcagaccccc cagcataatt ctgtcgtagg ctcggctaat tcgtcgcggc
     7141 gaggctgcag cccgacacaa gtcccgccac atttttgtca ttaacaaggc catcgctgcc
     7201 ccgcaaatga atttgtccac tgcccgaaag taacgacggt cggtcgcagg ccacgcggcg
     7261 cttctgcttg aaccggccgc cgccctcgtg taagagggcc gctcatttcc cccactgttg
     7321 gagacgttcc gtggcccgcg tcaccgttga agactgcatt gaaaagatcg ataaccgctt
     7381 cgatctggtg ctgctggcgg cgcaccgcgc ccgcatgatc tcggccggcg cgtcgatcac
     7441 cgtcgaccgc gacaacgaca agaatcctgt ggtttcgctg cgcgagatcg gcgatggcgc
     7501 catctcgccg gaggatctgc gcgaggatct gatccactcg ctgcagaaat acgtcgaagt
     7561 cgacgagccc gaaaagcacg ccgctccgct gctcgacgcc aatgccgacg aaaacagcga
     7621 caccttcgac accctgtccg aggacgagct gctgcgcggc atcgagagcc tcgcgccgcc
     7681 cgagcgccgc gacgattgat ccggggccgt ttcggcctat agtcatgcgg cgtccggcct
     7741 tggccgggcg cctttttgtt tgtccggccc ggaaagcccg ccgcgcggag agcggcagcg
     7801 atgatgcgtc agtatgaact cgtcgagcgg gtgcaggcgt acaatccgca cgccgacgag
     7861 cagctgctca acaaggccta tgtctatgcc atgcagaagc atggctccca gaagcgcgcg
     7921 tccggcgacc cctatttcgc tcacccgctc gaagtcgctg ccatcctgac cgacctcaag
     7981 ctggatgacg cgaccgtcgc cgttggcctg ctgcacgaca ctatcgagga taccgacgcg
     8041 acccgcgccg agatcgacca actgttcggc tccgagatcg gcgagatcgt cgacggcctg
     8101 accaagatcg agcgcctgca gctcgtgacg cgcgaggaag cccaggccga aaatctccgc
     8161 aagctgctgc tcgccatctc ggccgacgtc cgcgtgctgc tggtcaagct ggccgaccgc
     8221 ctgcacaaca tgcgcacgct cgatttcatg ccgcccgaca agcagcggcg catcgccgaa
     8281 gagacgatgg acatctacgc tccgctggcc ggccgcatgg gcatgcagga tatgcgcagc
     8341 gagctcgaga acctggcgtt ccgcacgctg cagcccgacc actacaaggc gatcaccgac
     8401 cggctggccg agcggcaggc ggagttcaag gaaaccatcg agaccatcac caccgagctc
     8461 accaccaggc tcaaggccga ggggatcgag gccagggtgt cggcgcgcgt caaatccgcc
     8521 tggtcgatcg ccaccaagat cgatcgcaag cagatcgcgc tcgagcagct ctccgacatg
     8581 atcggttttc gcatcatcgt gccgacgatt gccgactgct accgcgcgct cggcatcgtg
     8641 cacaccaact ggaaggtcgt tccaggacgc ttcaaggact acatttcggt ccccaagcac
     8701 aacgactacc ggtcgatcca taccaccatc gtcggtctcg gccggcagcg tatcgagctg
     8761 cagatccgca ccgaggagat gcatcgcatc gccgaatacg gcatcgccgc ccacgctctc
     8821 tacaaggacg gcggcaccgg cgacctccac catctcgaag gcgaaagcca ggcgttcgcc
     8881 tggttgcgtc agaccatcga gcacctgacc tcgggcgcct cggcggagga tttcctcgaa
     8941 tacaccaagc tcgagctgtt ccaggaccag gtgttctgct tcaccccccg tggccggctg
     9001 atcgcgctgc cgcgcggcgc cagcccgatc gactttgcct atgcgctcca caccgacatc
     9061 ggcgacacca ccgtcggcgc caagatcaac ggcgccatcg tgccgctggt gacgcatctg
     9121 caatcgggcg atgaggtcga gatcatccgc gaccagaatc acctgccgcc ggccaactgg
     9181 gaaacc
//
LOCUS       DATAZA010000228         6452 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_605476, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000228 DATAZA010000000
VERSION     DATAZA010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6452
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_605476"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VHZ56_05755"
     CDS             complement(<1..219)
                     /locus_tag="VHZ56_05755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018426053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4297509.1"
                     /translation="MSTAIDAVGGPVVEIENLSIVYGGGQGGSVAARDVSFSVNRGEI
                     FGLVGETGSGKSTILRSVIGLLHKNARIE"
     gene            complement(216..1067)
                     /locus_tag="VHZ56_05760"
     CDS             complement(216..1067)
                     /locus_tag="VHZ56_05760"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4297510.1"
                     /translation="MSTVALGRSAALPGWMRGWPPALVAGTAMLVLAIVVAAIGPQFT
                     PDPLALNLSAVLKPPSPQHWFGTDNFGRDVFARVINAAGVDLQFGFFSVPPTLVIGTA
                     LGVIAGTIHWFDVILMRLVDIVVAFPFYVLIIAIVASLGPGVINMYIAVTIIGWASYA
                     RLVRSEVLVVGGHQYVEAARVLGLSPSRVLWRHVLPNVIVQPVLLATTNFSAWILVGS
                     SLGFLGLGVQPPTPEWGVMIGEGRNYLAQAPWMAILPGLAIFYVCFAAILIGDGLSDV
                     LRPEVGR"
     gene            complement(1064..2014)
                     /locus_tag="VHZ56_05765"
     CDS             complement(1064..2014)
                     /locus_tag="VHZ56_05765"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4297511.1"
                     /translation="MLRFVIVRIVQMVPVLLGISLAMFVLVRIVPGDPAQAALGLYAT
                     PELIANLRAHWGLDQPIIVQYGIFLQQTLRGDLGYSYFYGQSALSLVLERLPPELFLV
                     IYAIVITIVISVPLAIWASLRRGGIGDAIVRVLVVFGQSMPSYWIGMLLLLLLGIWLP
                     IFPVGGYGSTFGAQLDSLFLPALTLALGLIPVVVRSLRASLIEAMEADHVDMARSKGV
                     VESVVFFRHAFRLALIPSVTLLGLHMGLLIGATLIVEFVFAVPGLGQLMLTAISSRDY
                     PTVVAVTLVFAVFVMVVNLLTDLIVAFLDPRARAAMVTAR"
     gene            complement(2127..4508)
                     /locus_tag="VHZ56_05770"
     CDS             complement(2127..4508)
                     /locus_tag="VHZ56_05770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018701158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase
                     N-terminal domain-containing protein"
                     /protein_id="HEX4297512.1"
                     /translation="MPVGGSGLEYREQLARKILWLSCWMIDQANQREKVDGVKVGGHQ
                     ASSASLVSVMTALYFHALRPADRIAVKPHASPVFHAIQYLAGKQSLESLENFRGFGGA
                     QSYPSRTKDADDVDFSTGSVGLGVGITVFASLVQDFIRARGWGEGPAGRMIALVGDAE
                     LDEGNVYEALQEAWKHNLRNCWWVVDYNRQSLDAVVSEGLNQRIETVFRAFGWNVVTL
                     KYGIRQRAVFEQPGGAGLRDWIDLCPNQLYSALTFQGGAAWRKRLTDDLGDQGQFSAL
                     IGSYDDPALEAIMGNLGGHCQRTLDEGFAAATGDVPTLFMAYTVKGWGTPLAGHKDNH
                     AGLMTQAQMEAFRKTMGIRQDHEWDMFEGLDLPRRELENFLRAAPFFSGGDRRLHAPP
                     IEVPGDLVRPPARAFETVSTQAAFGRILEGIAKSESALADRVLTTSPDVTVSTNLGPW
                     VNRRELFSRTEVRDLFKDQAIPSTQRWNAGPRGQHIELGIAEMNLFLLLGAAGLAHSL
                     FGTRLIPIGTLYDPFIMRGLDALNYACYQDARFILAGTPSGVSLAGEGGAHQSIATPL
                     IGMGQDGLEAFEPAFADELAIIVDWALDFVQRDGTGAAGRPSRAADAAGGSVYLRLST
                     RQIEQPARRSNPDFAGEVLDGATWLREPGPNAQLVIAYQGTIATEAIAAAGLIGELRR
                     DIGVLAVTSADRLYRGWQSAQADRLAGEETQSTVERLLGRLPPTCRLLTVIDGHPATL
                     SWLGGVCGHRTISLGVERFGQCGNVAELYRHYGIDARSIVHRALSFTEGRISA"
     gene            4615..5118
                     /locus_tag="VHZ56_05775"
     CDS             4615..5118
                     /locus_tag="VHZ56_05775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006931367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEX4297513.1"
                     /translation="MALSAKLDNFDRAILRELQSNARITNQQLSERVGLSPSPCLRRL
                     RRLEDEGYIAGYTAIVDEKRLGLGVAIFMSIKLERQVDSALTTFETEIAKYPEVIDCW
                     LMTGENDYLLLIRAAGLTEYEQFLTGTFTKIPGIASIQSSVSLRRVKSRVGDARPQPR
                     NGSLAAS"
     gene            complement(5123..5440)
                     /locus_tag="VHZ56_05780"
     CDS             complement(5123..5440)
                     /locus_tag="VHZ56_05780"
                     /inference="COORDINATES: protein motif:HMM:NF017174.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose mutarotase"
                     /protein_id="HEX4297514.1"
                     /translation="MTKYAWVLQVQPGFEQEYERRHAAIWPELLDEIRKAGQRNYVIF
                     RHGLTLIGTFECDDIERVYSVMRDSKVFAKWGEYNIAIVKGDVNPDTGYPYLLPKVWE
                     FEG"
     gene            complement(5523..>6452)
                     /locus_tag="VHZ56_05785"
     CDS             complement(5523..>6452)
                     /locus_tag="VHZ56_05785"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4297515.1"
                     /translation="QVARLVRNPYYWNQPYPCLDEVDLMVVGDPATQALQLQAGQIDV
                     AEELPPDQLAALRNAPGVNIQVYPSLAEELIRLQRVKQPAFADANVRKAMNFALDKQA
                     IASTVFFGTAKEQDSEMPRTLYYAPQTPYTYDVDKAKALMAQSAFPNGFTTQLMIASN
                     DPVESGIATVVKDELGKIGITVNVQQVEAGTKLQLRSSRSFEMFLASTSADQTDPESF
                     WEFCCAAGFGLGSAWTDYNNPDVISQFAEVKKTGGDKRGQLFAQMQKEVWDDAAQLYL
                     VFIDAPMGLRSNVKGFVLPPTRHHYFDTVYKTN"
BASE COUNT         1214 a         2082 c         2079 g         1077 t
ORIGIN      
        1 ctcgatgcgc gcgttcttgt ggagcaggcc gatgaccgag cggaggatcg tgctcttgcc
       61 gctgccggtc tcgccgacga ggccgaatat ctcgccgcga ttgacactga aggacacgtc
      121 gcgcgcggcg accgagcctc cctgcccgcc accgtagacg atgctcaggt tttcaatttc
      181 gacgacaggg ccgccgacgg cgtcgatggc ggtactcatc gcccgacctc cggccgcaac
      241 acgtcagaca ggccatcgcc gatcaggatg gcggcaaagc agacatagaa gatcgccaga
      301 ccgggcagga tggccatcca cggcgcctgg gcgaggtagt tgcgcccctc gccgatcatc
      361 acaccccact ccggcgtcgg cggctgcacg ccgaggccca ggaagccgag cgagctgccc
      421 accaggatcc atgcgctgaa gttcgtcgtg gccagcagca ccggctgcac gatcacattg
      481 ggcagcacgt ggcgccacag cacacgcgag ggcgagaggc cgagcaccct tgcggcctcg
      541 acgtattgat gaccgccgac gaccaggact tcgctgcgca ccagccgggc atagcttgcc
      601 cacccgatga tggtgaccgc gatgtacatg ttgatcacgc cgggcccgag cgaggcgacg
      661 atggcgatga tgagcacgta gaacgggaag gctacgacga tgtccaccag ccgcatgagg
      721 atgacgtcga accagtggat ggttccggcg atgacgccga gcgccgtgcc gataaccagc
      781 gtcggtggaa ccgagaagaa gccaaactgc aggtcgaccc ccgccgcgtt gatgacgcgg
      841 gcgaagacat cgcggccgaa attgtccgtg ccgaaccagt gctgagggct cggcggcttc
      901 agcacggcgc tgaggttcag ggccagcgga tcgggcgtga actgcgggcc gatcgcagcg
      961 acgacgatgg ccagcacgag cattgccgta ccggcgacca gcgctggcgg ccagccgcgc
     1021 atccatcccg gcagggccgc gctgcgcccc agcgccacgg tgctcatcgc gccgtcacca
     1081 tggcggcgcg ggcgcgcgga tcgaggaagg cgacaatgag gtccgtgagc aggttgacga
     1141 ccatgacgaa gaccgcaaac accagcgtca cggcgacgac cgtcgggtag tcgcgcgagg
     1201 agatcgcggt cagcatcagc tggcccaggc cgggcacggc aaatacgaat tccacgatga
     1261 gggtggcgcc gatcagcagc cccatgtgca gcccgaggag cgtgacggac ggaatgaggg
     1321 ccaggcggaa ggcgtggcgg aagaacacga cgctttccac cactcccttg gatcgcgcca
     1381 tgtcgacgtg atcggcctcc atggcctcga tgaggctggc gcgcagcgag cggacaacga
     1441 ccgggatcaa tccaagggcc agggtgagcg cgggcaggaa aagcgaatcc agctgcgcac
     1501 caaacgtcga gccgtagccg cccaccggga aaatcggcaa ccagatgccg agcaacagca
     1561 ggagcagcat tccaatccag taggagggca tgctctggcc gaaaaccacg aggacccgga
     1621 cgatggcatc gccgatgcca ccgcgtcgca ggctggccca tatggccagc ggcacgctga
     1681 tgacgatggt gatgacgatg gcgtagatga cgagaaacag ctcaggcgga aggcgttcga
     1741 ggaccagcga cagggcggac tgaccataga aataggaata tccgaggtcg cccctcaggg
     1801 tctgctgcag gaagatgccg tattggacga tgatcggctg atccagcccc cagtgcgccc
     1861 tgagattggc gatcagctcg ggcgttgcgt agaggccgag ggccgcctgc gccgggtcgc
     1921 ctgggacgat gcgaaccagc acgaacatcg ccaggctgat gcccaacagc accggcacca
     1981 tctgcacgat cctgacgatg acgaatctca gcatctatcg agtccgcaac ccaatgccct
     2041 gactcgcctt cgagccccca tcgcaccaat tggtatcaaa ccaaccggga cgacaagacg
     2101 taaagcggat tgtttccggc cgggcattag gcgctgatcc gaccttcggt gaagctcaaa
     2161 gcgcggtgca cgatcgaacg cgcatcgatg ccgtagtgcc tgtagagttc cgccacgttg
     2221 ccgcattggc cgaaccgctc gacaccgagg ctgatcgtgc ggtgaccgca gacgcccccc
     2281 agccacgaca gcgtggcggg gtgaccgtcg atgacggtga ggagccggca ggtcggcggc
     2341 aggcgaccga ggaggcgctc tacagtgctc tgtgtctcct cgccggcgag ccggtcggct
     2401 tgagccgatt gccagccgcg gtacaggcgg tcggccgagg tcaccgcgag cacgccgata
     2461 tcgcgccgca actcgccgat cagtccggcg gcggcaatcg cttcggtggc gatcgttccc
     2521 tgataggcga tgaccagctg ggcattcggc cccggctcgc gcagccaggt cgctccgtcg
     2581 agcacctccc cggcaaagtc tggattgctg cggcgcgccg gctgttcgat ctggcgcgtc
     2641 gagagccgca gatagaccga accaccggcc gcgtcggcgg cgcgcgatgg ccgccctgcc
     2701 gcacccgttc cgtcgcgttg aacgaagtcc agcgcccagt cgacgatgat cgcaagttcg
     2761 tcggcgaagg ccggctcaaa ggcctccagc ccatcctgcc ccatgccgat caggggcgtg
     2821 gcgatggact ggtgggcccc gccttcgccg gcgagcgata cccccgacgg tgtccccgcg
     2881 agaatgaagc gggcgtcctg gtagcaggca tagttgagcg catcgagccc ccgcatgatg
     2941 aagggatcgt acagcgtgcc gatcggaatg agccgcgtgc cgaacagcga atgcgccagg
     3001 ccggcggcac ccagcagcag gaacaggttc atctcggcaa tgccaagctc gatatgctgt
     3061 ccccgtggac cggcgttcca tctctgggtg ctggggatgg cctgatcctt gaacaggtcc
     3121 cgcacctcgg tccgcgagaa cagctcgcgg cggttgaccc aggggccgag gttggtcgaa
     3181 accgtgacgt ccggcgatgt cgtcagcacc cgatcggcga gggccgactc gctcttggcg
     3241 atgccctcga ggatacggcc gaaggccgcc tgggtcgaaa ccgtctcgaa ggcgcgcgcc
     3301 ggcggtcgca ccaggtcgcc gggtacctcg atgggtggcg cgtgcaggcg ccggtcgcct
     3361 cccgagaaga acggagcggc gcgcaagaaa ttctcgagct cccgccgcgg caggtcaagg
     3421 ccttcgaaca tgtcccattc gtggtcctgc cgaataccca tggtcttgcg aaaggcttcc
     3481 atctgggctt gcgtcatcag gcccgcatgg ttgtccttgt gaccggcaag cggcgtgccc
     3541 cagcccttga ccgtgtaggc catgaacagc gtcggcacat cgccggtcgc cgcggcgaaa
     3601 ccctcgtcga gcgtgcgctg gcagtggccg ccgagattgc ccattatcgc ttcgagcgcg
     3661 gggtcgtcat aggacccgat gagggcgctg aattggccct ggtcgccaag gtcgtccgtc
     3721 aggcgcttgc gccaggccgc cccgccctgg aaggtcagcg ccgagtacag ctggtttgga
     3781 caaaggtcga tccagtcgcg caagccagcg ccaccgggct gttcgaacac cgcgcgctgg
     3841 cgaatgccgt atttcaatgt gacgacgttc cacccgaagg cgcgaaagac cgtctcgatc
     3901 cgctggttca ggccctcgct gaccaccgcg tcgagactct ggcggttgta gtcgaccacc
     3961 caccagcagt ttcgcaaatt gtgcttccag gcctcctgca gcgcttcgta gacgttccct
     4021 tcgtcgagct cggcgtcacc tacgagggcg atcatccgtc ctgccggtcc ctcgccccag
     4081 ccgcgcgccc ggataaagtc ctgaacgagc gaggcgaaca ccgtgatacc gaccccgagg
     4141 cccaccgaac ccgtcgaaaa atcgacgtcg tcggcgtcct tggtgcggct ggggtaagac
     4201 tgcgctcctc caaaaccccg gaaattctcg agactctcga ggctctgctt gcccgcgaga
     4261 tactggatcg cgtgaaagac cggcgaggcg tgcggtttga cggcgatccg gtcggctgga
     4321 cgcaaggcat gaaaatacag tgccgtcatc accgagacga gcgatgcgct cgacgcctgg
     4381 tggccgccga ccttgacgcc gtcgaccttc tcacgctggt tcgcctgatc gatcatccag
     4441 caggacagcc agaggatctt ccgggcaagc tgctcccgat attccaaacc gctcccgccc
     4501 accggcatcc cctgtctagc caagcaaaga tagcgctgtt ggcccgcgat tttcttgcta
     4561 tcctcggccg aaccgtgccc ggagcggcag cttgcctcta atctggagag tcctttggca
     4621 ctttctgcca agcttgataa tttcgatcgt gcgatccttc gcgagttgca aagcaacgcc
     4681 cgcataacga accagcagtt gagcgagcgg gttggcctga gcccgtcgcc ctgcctcagg
     4741 cggctgcggc ggctcgagga tgaggggtac atcgcgggct acactgccat cgtcgacgag
     4801 aagcgcctgg ggctgggggt tgccatcttc atgtccatca aactcgagcg gcaggtcgac
     4861 tcggcgctga ccaccttcga gaccgaaatc gccaagtacc ccgaggtcat cgactgctgg
     4921 ctgatgactg gagaaaatga ctatctcctg ctgatacgcg ccgccgggct gaccgaatac
     4981 gaacagttcc tgaccggaac tttcaccaag attccaggca ttgcgtcgat ccaatcgtcg
     5041 gtatcgctgc gccgcgtaaa gagccgggtt ggagatgcac ggccacagcc gcgcaatgga
     5101 tcactggccg cttcctgacg gcctacccct cgaactccca gaccttcggg agaagatagg
     5161 gatatccggt gtcagggttg acgtccccct tcactatagc gatgttatac tcgccccact
     5221 tggcgaagac cttgctgtcc cgcatcacgc tgtagacccg ttctatgtcg tcgcactcga
     5281 atgtgccgat cagggtcagg ccatggcgga atatgacgta gttgcgctgc cccgccttgc
     5341 ggatttcgtc gagaagctcc ggccagatcg cggcgtgtcg ccgctcatat tcctgctcga
     5401 agccaggctg gacctggagc acccacgcat atttcgtcat ctgccgctcg cgttgcctgc
     5461 gtctggtcga acatcatcga ggcgagcccc ggtgtgcggg cccgcctcgt ggtcatcgac
     5521 tgtcagttcg tcttgtagac ggtgtcgaaa taatggtgcc gcgtgggtgg cagcacgaag
     5581 cccttcacat tggagcggag ccccatcggc gcgtcgataa agaccagata gagctgcgca
     5641 gcgtcgtccc acacttcttt ctgcatctgg gcgaagagct ggccgcgctt gtcgccgccg
     5701 gtcttcttga cctcggcgaa ctggctgatc acgtcggggt tgttatagtc ggtccacgcc
     5761 gaccccaacc cgaacccggc ggcacagcag aactcccaga aggattccgg atcggtctgg
     5821 tcggcactcg tgctcgcgag gaacatctcg aacgaccggc tgctgcgaag ctgcagcttg
     5881 gtgccggcct cgacctgctg aacgttgacg gtgatgccga tcttgccgag ttcgtccttc
     5941 accacggtgg cgatgccgct ttcgaccgga tcgttcgagg caatcatcaa ctgcgtcgtg
     6001 aagccgttgg ggaacgcgct ctgcgccatc agcgccttcg ccttgtcgac gtcgtaggtg
     6061 tagggcgtct gcggcgcgta atagagcgtg cgcggcatct ccgagtcctg ttccttggcc
     6121 gttccaaaga acacggtgct ggcaatggcc tgcttatcca gcgcgaagtt catggccttg
     6181 cggacattgg catcggcaaa agcaggctgc ttgacgcgct gcaggcggat gagttcctcg
     6241 gcgagcgagg gatagacctg gatgttgacg ccgggggcgt tgcgcagggc agccagctgg
     6301 tccggcggaa gctcttcggc cacatcgatc tggccggcct gcagctgcag ggcctgggtc
     6361 gccgggtcgc ccaccaccat caggtcaacc tcatcgaggc agggataggg ctggttccag
     6421 tagtaggggt tgcggacgag ccgcgccacc tg
//
LOCUS       DATAZA010000229         3203 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2462802, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000229 DATAZA010000000
VERSION     DATAZA010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3203
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2462802"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..770)
                     /locus_tag="VHZ56_05790"
     CDS             complement(<1..770)
                     /locus_tag="VHZ56_05790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX4297516.1"
                     /translation="MITPGTTGRQELGAFLRAHRERLTPAEMGIEPGPRRRTPGLRRE
                     ELASLAGVSGTWIAWIEQGRDVSVSAAALHRLARTMRLSAPERHYLFELAGRRDPEAA
                     PEPAGDALAAELERLLATFATPAYALDRSWTALAWNAPATRLFVGWLDRGAERNLLRY
                     VFLDPLARDLIADWDSRALRLAAEFRADYGRHLAAADTRAFVDRLLAESPVFARAWQA
                     HEVTEREGGERRFTHPLDGPLRYRQATLLLARQPDVKIV"
     gene            854..1630
                     /locus_tag="VHZ56_05795"
     CDS             854..1630
                     /locus_tag="VHZ56_05795"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX4297517.1"
                     /translation="MTAPASTASRTALNDRQFGTTAADYVASPVHAEGDDLRQIAEIA
                     RHVGGRVIDLGCGGGHVSYAVAPHVQSVVAYDLSAGMLSAVAAEAKRRGLGNIETAQG
                     PAEALPFPDASFDAVFCRYTAHHWPDVRRGLREARRVLKPGGIAVFEDIVAPEQPVLD
                     TFLQTLEMMRDPSHVRDYAAGEWVEFAAQAGFMVTGVTRRRLFLDFDAWAARQRVPAP
                     MVTAIRMLFASMSDEVRAHFAIAGNDDFTIDPVVFELRPI"
     gene            complement(1636..2562)
                     /locus_tag="VHZ56_05800"
     CDS             complement(1636..2562)
                     /locus_tag="VHZ56_05800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006935514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HEX4297518.1"
                     /translation="MSTALIVDAEIDRQLKGWTRDLGAVRRLAPKTLEAYGRDLGQFL
                     NFLALHTGGPVSLATLRELRPADFRAFMARRRDDGVEPRSLARSLSAIKGFFRFLERE
                     GVLATEALNVIRTPRAKKSLPKALTVREAKATIVTTGELEDRPWVAARDMAVLSLCYG
                     AGLRISEALSLTRTDLEGPTLRVTGKGNKTRMVPLIEPVRQAVDAYLGLCPFKLGPSQ
                     PLFRGTKGGVLSPRLIQLRVAQLRGALGLPASATPHALRHSFATHLLGRGGDLRAIQE
                     LLGHASLSTTQIYTAVDTDRLLEAYRAAHPRG"
     gene            complement(2572..>3203)
                     /locus_tag="VHZ56_05805"
     CDS             complement(2572..>3203)
                     /locus_tag="VHZ56_05805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003608750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX4297519.1"
                     /translation="TDSPETFGHVEAGRMMIMLNRDDYWQCAFVIRKGSAAALQQGPV
                     DAFRRRVLELSPFLADRIGEIKDWSDVKLLTVAVDRLRRWYRPGFLAIGDAAHAMSPI
                     GGVGINLAIQDAVAAANLLAGPLRRGSVSVADLAAVQARREFPMKVIQAGQIAIQKQV
                     IDKLLSADTPLRAPWPLRLLASMPAFRGLAARIVGVGVRPEHVAVTPGG"
BASE COUNT          455 a         1064 c         1240 g          444 t
ORIGIN      
        1 acgatcttga cgtcgggctg gcgggccagc agcagggtgg cctggcgata gcgcagcggg
       61 ccgtcgagcg gatgggtgaa acgccgttcg ccaccttcgc gctcggtcac ctcgtgggcc
      121 tgccaggcgc gcgcaaagac cgggctctcg gcgagcaggc gatcgacgaa ggcgcgggtg
      181 tcggcagcgg cgaggtggcg gccgtagtcg gcgcggaatt cggcggcgag gcgcagcgcg
      241 cggctgtccc agtcggcgat caggtcgcgg gcgaggggat cgaggaagac gtagcgcagc
      301 aggttgcgtt cggcgccgcg atccagccag ccgacaaaca gccgggtggc gggggcgttc
      361 caggccagcg ccgtccagct gcgatcgagc gcgtaggcgg gggtggcgaa ggttgcgagg
      421 aggcgctcca gctcggccgc cagcgcgtcg cccgccggct ccggcgccgc ctccggatcg
      481 cggcggccgg cgagctcgaa caggtagtgc cgctcggggg cgctcagccg catggtgcgg
      541 gccagccggt gcagggcggc cgccgatacc gacacgtcgc ggccctgctc gatccaggcg
      601 atccaggtgc cgctgacgcc ggcgagcgaa gccagctcct cgcgccgcag gccgggcgtg
      661 cgccgccgtg gtccgggctc gatgcccatc tcggccgggg tgagccgctc gcggtgggcg
      721 cgcaggaagg cgcccagttc ctgtcgtccg gtggtgccgg gggtgatcat gggagcatct
      781 tataccagga taagattgca tctggttaga gtgtatcggc gggcgtagag cggcggccaa
      841 caggagttcc gccatgaccg cacccgcatc caccgcctcc cgaactgccc tgaacgaccg
      901 gcaattcggc accaccgccg ccgactacgt ggcgagcccg gtgcatgccg agggcgacga
      961 cctcaggcag atcgccgaga tcgcgcgcca cgtcggcggc cgggtgatcg acctcggctg
     1021 cggcggcggg catgtgagct acgcggtggc gccgcacgtc cagtcggtgg tcgcgtacga
     1081 cctctccgcc ggcatgctgt cggcggtggc ggcggaagcg aaacggcgcg ggctgggcaa
     1141 tatcgagacg gcgcaagggc cggcggaggc gctgccgttc cccgacgcca gcttcgacgc
     1201 ggtgttctgc cgctacaccg cgcatcactg gccggacgtt cgccgcggcc tgcgcgaggc
     1261 gcggcgggtg ctgaagccgg gcggcatcgc ggtgttcgag gacatcgtgg cgcccgagca
     1321 gccggtgctc gacacgttcc tccagacgct cgagatgatg cgcgacccct cgcatgtgcg
     1381 cgattacgcg gccggtgaat gggtcgagtt cgcggcccag gcggggttca tggtcaccgg
     1441 cgtgacgcga cggcggctgt tcctcgattt cgacgcatgg gcggcgcggc agcgggtgcc
     1501 ggcaccgatg gtgacggcga tcagaatgct gttcgcgtcg atgtcggacg aggtgcgggc
     1561 gcatttcgcc atcgccggca acgacgattt caccatcgat ccggtggtgt tcgagctgcg
     1621 gccgatctag ctgcgtcagc cgcgcgggtg ggcggcgcga taggcctcga gcaggcggtc
     1681 ggtgtcgacg gcggtataga tctgggtcgt cgacagcgag gcgtggccga gcagttcctg
     1741 gatggcgcgc aggtcgccgc cgcggcccag caggtgcgtc gcgaaggaat gccgcagcgc
     1801 gtgcggcgtg gcgctcgccg gcaggccgag ggcgccgcgc aattgcgcca cgcgcagctg
     1861 gatcaggcgc ggcgacagca cgccgccctt ggtgccgcgg aacaggggct ggctcggccc
     1921 gagcttgaac gggcagaggc cgagatacgc atcgaccgcc tgccgcaccg gctcgatcag
     1981 cggcaccatg cgggtcttgt tgcccttgcc ggtgacccgc agcgtcggcc cctcgaggtc
     2041 ggtgcgggtc agcgacagcg cttcggaaat gcgcaggccg gcgccgtagc agagcgacag
     2101 caccgccatg tcgcgggcgg cgacccaggg ccggtcctcg agttcgccgg tagtaacgat
     2161 ggtggccttg gcctcgcgca ccgtcagcgc cttgggcagc gattttttgg cgcgcggcgt
     2221 gcggatgaca ttgagcgcct cggtggccag cacgccctcg cgttcgagga agcggaagaa
     2281 gcccttgatg gcgctgagcg agcgggccag cgaccgcggc tcgacgccgt cgtcgcggcg
     2341 ccgcgccatg aaggcgcgaa aatcggcggg gcgcagttcg cgcagcgttg ccagcgacac
     2401 cgggccgccg gtgtgcagcg ccaggaagtt gaggaactgg ccgaggtcgc ggccataggc
     2461 ctcgagggtt ttcggcgcca gccggcgcac cgcgccgagg tcgcgggtcc agcccttgag
     2521 ctggcggtcg atctcggcgt cgacgatgag cgcggtggac atggcgcgag cctagccgcc
     2581 cggggttacc gcaacgtgtt cggggcggac gccgaccccg acgatacggg cggcgaggcc
     2641 gcggaacgcc ggcatgctgg ccagcaggcg cagcggccag ggcgcgcgca gcggcgtgtc
     2701 ggccgacagc agcttgtcga tcacctgctt ctggatggcg atctggccgg cctggatcac
     2761 cttcatcgga aactcgcgcc gcgcctgcac ggcggcgagg tcggccacgc tgacggaccc
     2821 gcgccgcagc ggcccggcca gcaggttggc cgccgccacc gcgtcctgga tggcgaggtt
     2881 gatgcccacc ccgccgatcg gcgacatggc gtgtgccgca tcgccgatgg cgaggaagcc
     2941 cgggcggtac cagcggcgca gccggtcgac ggcgacggtc agcagcttga cgtcgctcca
     3001 gtccttgatc tcgccgatgc ggtcggcgag gaacggcgac agctcgagca cgcggcggcg
     3061 gaacgcgtcc accggcccct gctgcagcgc cgcggcgctg cccttgcgga tgacgaaggc
     3121 gcactgccag tagtcgtcgc ggttgagcat gatcatcatc cgcccggcct cgacatggcc
     3181 gaaggtttcc ggcgagtccg tcg
//
LOCUS       DATAZA010000230         2111 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_374618, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000230 DATAZA010000000
VERSION     DATAZA010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2111
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_374618"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..288)
                     /locus_tag="VHZ56_05810"
     CDS             complement(<1..288)
                     /locus_tag="VHZ56_05810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013947831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX4297520.1"
                     /translation="MSGTPENMLGTYLRDRRVRLDPSAFGFPLSRRRTPGLRREEVAQ
                     RANVSSTWYTWLEQGRGGAPSADVLDRISRALMLTEVEREHIFLLALDRPPE"
     gene            383..1276
                     /locus_tag="VHZ56_05815"
     CDS             383..1276
                     /locus_tag="VHZ56_05815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4297521.1"
                     /translation="MRVFVTGASGFVGSAVVQELLANGHSVVGLARSDASAAAVEKAG
                     ATVLRGTLEDRDSLRRGAAEAEGVVHTAFNHDFSKFAENGEVEKQAIAALGEALAGTN
                     RPLIVTSGTAFLSPGKVGTEDMAAVDSRAPRNPEGAAFAFLPQGVRASVVRLSPSVHG
                     RGDHGFVPVLIGIAREKGFSAYIGEGANHWPAVHRLDAARVFRLALERGTPGARYHAA
                     AEQGIAFRDIATAIAEGLKLPAKSIAQEELAAHFGWFARFAGIDNQVSSALTRSQLGW
                     APSEPGLLDDLAAGHYFGQSA"
     gene            1324..1539
                     /locus_tag="VHZ56_05820"
     CDS             1324..1539
                     /locus_tag="VHZ56_05820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297522.1"
                     /translation="MADYRLLMAQGKHLVFAHDKEFSDLWKEIRESEVVEFDAELVDG
                     DDRYMGHVAVQRQHIIGLFLERSRGHG"
     gene            1770..>2111
                     /locus_tag="VHZ56_05825"
     CDS             1770..>2111
                     /locus_tag="VHZ56_05825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEX4297523.1"
                     /translation="MQEHAEAPAAPPLRIGVAGLGNVGATLVRILQKDAGELNRKIGR
                     AITVTAVCARSRSKDRGIELADIAWFDDPVALARSEGIDLFVELIGGEDGPALAAVRA
                     ALEIGRPVVTAN"
BASE COUNT          333 a          743 c          682 g          353 t
ORIGIN      
        1 ctcgggcggc cggtcgagcg ccagcaggaa gatgtgctcg cgctccactt cggtcagcat
       61 cagcgcccgc gagatccggt cgagcacgtc ggccgacggc gcgccgccgc ggccttgctc
      121 gagccaggtg taccaggtgg agctcacatt ggcgcgctgc gccacttcct cgcgccgcag
      181 ccccggcgtc cgccgtcggc tcagtggaaa tccgaaggcc gaggggtcga gcctgacccg
      241 ccggtcacgc agataggtgc ccagcatgtt ctcgggcgtg ccgctcatag cgtgttgatc
      301 cttataccgg tataaagtcc ctactttaac tggatagaag ctaggcccaa ctgcgctcca
      361 gttcaatccg gagatgactt cgatgcgtgt attcgtgacg ggcgccagcg gcttcgtcgg
      421 ctcggcggtg gtgcaggagc ttctggccaa tggccacagc gtggtcgggc tggcgcgctc
      481 cgatgcctct gcagccgcag tggagaaggc cggtgccacc gtgctccgcg gcacgctcga
      541 ggatcgcgac agcctgcggc gcggcgcggc agaggccgag ggagtggtcc acaccgcctt
      601 caaccacgac ttctcgaaat ttgccgaaaa cggcgaagtg gagaagcagg ccatcgcggc
      661 gctcggcgaa gcgctcgcgg gcaccaaccg gccgctgatc gtcacctccg gcaccgcctt
      721 cctgtcgccg ggaaaagtgg ggacggagga catggcggcg gtcgacagcc gcgctccgcg
      781 caatcccgag ggcgccgcct tcgccttcct gccacagggc gtccgcgcct ccgtcgttcg
      841 cctgtcgcct tccgttcatg gtcgcggcga ccacggcttc gttcctgtcc tcatcggcat
      901 tgcccgcgaa aagggcttct cggcctacat cggtgagggc gcgaaccact ggccggcagt
      961 tcaccggctc gatgcggcac gggtgttccg cctggcgctg gagcgcggca cgcccggtgc
     1021 gcgctaccac gctgccgccg aacagggcat cgccttccgc gacatcgcca cagcgatcgc
     1081 cgagggcctg aaactgcctg caaagagcat cgcccaagag gagcttgctg cccatttcgg
     1141 ctggttcgcg cgctttgccg gcatcgacaa ccaggtctcg agcgccttga cccggtcgca
     1201 gctcggctgg gctccatccg agcccggact gctggacgac ctcgccgccg gacattactt
     1261 cggccagtcc gcctgaacca atcgtcgcgc ctcccgtttc cctgcgacga acgggaggct
     1321 tcgatggccg actaccggtt gctgatggcg cagggcaagc acctcgtctt tgcccacgac
     1381 aaggaatttt ccgacctctg gaaggaaatc cgcgagagcg aagtggtcga gttcgacgcc
     1441 gagctcgtcg atggtgacga ccgctacatg ggtcatgtcg ccgtccagcg gcagcacatc
     1501 atcggcctct tcctcgagcg ctcgcgcggc cacggctgac gaactcctat tgacgaatag
     1561 ggtatctcct attcatagct cgcccagagg agcattctcc gatgagcgac atcgacgcct
     1621 tccgcgagac catcgaggct ttcatcgtgg cgcgcggctg gacgccgacg cgtttcggcc
     1681 gccaggtcgc cggtgaccca ctgttcgtct tcgacctgcg cgagggccgg gagccgcgcg
     1741 ccgaaacccg ggcacgcatc ctcaaggcga tgcaggaaca cgccgaagca cccgccgcgc
     1801 cgccgctccg tatcggcgtt gccgggctcg gcaatgtcgg cgccacgctg gtccgcatcc
     1861 tccagaagga cgccggcgag cttaaccgca agatcggccg cgccatcacc gtcaccgccg
     1921 tctgcgcccg ctcgcgcagc aaggaccgtg gcatcgagct tgccgatatt gcctggttcg
     1981 acgatccggt ggcgctggcc cgctccgagg gcatcgacct cttcgtcgag ctgatcggcg
     2041 gcgaggacgg tccggcgctt gctgccgtcc gcgccgcgct cgagatcggc cggccggtcg
     2101 tcaccgccaa c
//
LOCUS       DATAZA010000231         6904 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1302998, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000231 DATAZA010000000
VERSION     DATAZA010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6904
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1302998"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            119..1138
                     /locus_tag="VHZ56_05830"
     CDS             119..1138
                     /locus_tag="VHZ56_05830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007760341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX4297524.1"
                     /translation="MTYRASDTRYDSTPFRRSGRSGLKLPAISLGLWQNFGGTRDYPS
                     AFEILSYAFDHGITHFDLANNYGPPPGAAEELFGDIMARDFRPYRDELIISSKAGWEM
                     WPGPYGDLGSRKYLIASCDQSLKRMGLDYVDIFYSHRYDPDTPLEETMGALAQLHRQG
                     KALYVGISSYPREQTREAHRILGEMGVPVLIHQPSYSILNRWIEDDDTIGACGELGIG
                     VIAFSPLAQGVLSGKYSKGRDGTRAGERNSSIGARALAPKVLAAVEALGKIARARKQT
                     LVQLALAWVLRRPEMTSALIGVRTLEQLKDCLGALDNLAFTARELAAIDTAVKGAMLD
                     SRPQV"
     gene            1147..2391
                     /locus_tag="VHZ56_05835"
     CDS             1147..2391
                     /locus_tag="VHZ56_05835"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEX4297525.1"
                     /translation="MTYRTAMATGLTWLILLSLLVLPPLHGNLLGYIAMGAAIIGLVA
                     VWDLGAYREVFGRPWIWMIVGAYACLAIAIVGVAKTAGETLTVVDFVPFLLVIPAAAL
                     FARARLAEPLSTIAALSLGGTLVSLAICLTQIALYHARRPGGWEMSPIHFGDFAVILG
                     FLSLGGLLVPGARWRAMYWAGPAIGLVDGMLTGTRASLVVGVCLLPLAGYFVWRHGPG
                     RRAALLLAGAVVVLLAVPLALSAEGSVGRSLGAYQVIDQVAHGDEVTDSSAAYRLDQY
                     TAAVRAFFDAPVFGHGWRDQVQSALPYMSAEGKAGYAREHWGYIHDEFLSLAVGMGVF
                     GILAWLLLMAYPIVAVRTAPRDAESAARTYLGLAVLVGIGVSGLTDVLFMTELPKVFF
                     GFLPAAIILLRPAAVPAREASA"
     gene            2388..3278
                     /locus_tag="VHZ56_05840"
     CDS             2388..3278
                     /locus_tag="VHZ56_05840"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HEX4297526.1"
                     /translation="MNAVFPPGAIHIALTFDDNFWAPAYAVMRSACLSTRRRRDLVFH
                     LGVAGITPGHRLDLEKIASEFGATQVFYDLTQNQDFLRICGPLRASKRFPPIAYARLV
                     LDRIVPDSIERIIYLDSDTLVIKPIEWLYDQDMQGNPIAAVSDPFGMHIMMGRDMRAK
                     AGIFDPADPYFNSGVLLIDMAGFRAADVPKHLAGFVKNDLLRRLYFDQDMLNLIFRGR
                     WTALNWRFNTIDPWRAQQAMGPYIIHYTGDQRPWHLLSLAPFHHMYRHTMTNELFYRF
                     WRHRIRQRWKKRFNRLLGRQ"
     gene            3278..4090
                     /locus_tag="VHZ56_05845"
     CDS             3278..4090
                     /locus_tag="VHZ56_05845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297527.1"
                     /translation="MDLPVVCSFWHGELSWLERLCISSYIERGHRFRLYTYATLDGLP
                     PGCEAADAGAVVPQDEMFFYKGSRTPAVFADLFRLRLMQAEAGIWVDCDCYCVRPYAG
                     LGDYVYGIEGSWDGKPTSPQLVNNAVFRCPANSELLAALLATFAPGAIPPGMPWHRAA
                     EVRLRRLFGETLPVQNMQFGATGPWPLNHHLKRLGLFGRAQPKPVFYPMNYGQAPLLL
                     APGRDLSAMIRPETLSAHFWHSSLTDRGTGKPAPPQPGSFFAREIERLKLSL"
     gene            complement(4110..6518)
                     /gene="pheT"
                     /locus_tag="VHZ56_05850"
     CDS             complement(4110..6518)
                     /gene="pheT"
                     /locus_tag="VHZ56_05850"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEX4297528.1"
                     /translation="MKFTLDWLQDHLETRASVDEISTALTTVGLEVESVEEQGKALQP
                     FVVARVVEAKPHPNSDHLKLCKVDAGTGTLIDVVCGAPNAASGMKSVFAFPGTWIPGK
                     DFELKAGVVIRGAPSNGMLCSAAELQLSEDHDGIIVLPDDAPVGMPYVEYAGIGGAVF
                     DVSITPNRGDATSVRGIARDLAAYGLGTLTDGAIAPQPSPGGTSPIGVDLHFGAGEPQ
                     ACRMFAGRLIAGVRNGPSPRWMQDRLRAIGLRPISALVDITNYVTIDRGRPLHVFDAD
                     KLTGPVQARMAKAGETLLALDGRSYALDPTIPVIADASGPVGIAGIMGGEPTGSNDAT
                     VNVFVESAWFEPMAVAQAGRKLGIVSDARYRFERTVDPESVLPGIELATRLILELCGG
                     IAHEVVVAGHVEGAGTVIDFPLSEVRRLTGLELPPARIADILARLGFTVAGSGATLQV
                     RVPSWRPDVTQKADLVEEVMRMEGVDKVPVDPLPRLTGVAPRMLTVMQNRRRAAKRLL
                     AARGLDEAVTWSFISAAEAKRFGGGAPQLRLANAIAADLSDMRPSLLPGLLAAARRNG
                     NRGVRDIGLFEVGQVFLSDLPEGQHTYATAIRAGASARDWQGAQKLTVFDAKADLGAV
                     LDGLGHDLDKLQLSSEAPDWAHPGRGGRVQLGPKLAIAWFGELHPALASELDLAGPVV
                     AFELDLDAIPEPRRKPTRSKPALKLSDLMPVERDFAFVVGRDVAAAMVLRAARNADKA
                     LITDVTVFDLFEGAGVGEDRKSIAIRATLQPVDRTLTDEEIDKVAAAIVAAVGKATGA
                     VLRT"
     gene            complement(6515..>6904)
                     /locus_tag="VHZ56_05855"
     CDS             complement(6515..>6904)
                     /locus_tag="VHZ56_05855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297529.1"
                     /translation="AEIVMPRYADWVEALPGFHVFAAAPIIFDGLWMDHYLETFAGTR
                     VLGGPFKTRQIFRGGGVCLYTMAGTLRGAEYLKWGMQRVPPEWYGNIVHTHRAIDDAR
                     GFANVLAKLFSISGGLPRIEATESVYR"
BASE COUNT         1010 a         2552 c         2207 g         1135 t
ORIGIN      
        1 ggctttgctt gaagccgcgc cggctttgcg gcagtgtccg cccggcaaac caccgggctt
       61 tgttgcggcc gcctgagcgg cgggcccctc attctgctgc gatctccggg agaccgtcat
      121 gacctaccgc gcttccgaca cgcgctacga cagcacgccg ttccgccgca gcgggcggtc
      181 gggcctgaag ctgccggcga tctccctcgg gctctggcag aatttcggcg gcacccgcga
      241 ctatccctcg gctttcgaaa tcctgagcta tgccttcgat cacggcatca cccacttcga
      301 tctcgccaac aattacgggc cgccgcccgg cgccgccgag gagctgttcg gcgacatcat
      361 ggcccgcgac ttccggccct atcgcgacga gttgatcatt tcctccaagg ccggctggga
      421 gatgtggccc ggcccctacg gcgacctcgg cagccgcaaa tacctcatcg cttcgtgcga
      481 ccagtcgctg aagcgcatgg gcctcgacta tgtcgacatc ttctattcgc accgctacga
      541 ccccgacacg ccgctcgagg agaccatggg cgccctcgcc cagctgcatc gccagggcaa
      601 ggcgctctac gtcggcatct cgtcctatcc gcgcgagcag acccgcgagg cgcaccgcat
      661 cctcggcgaa atgggggtgc cggtgctcat ccaccagccg agctattcca tcctcaaccg
      721 ctggatcgag gatgacgaca ccatcggggc ctgcggtgag ctcggcatcg gcgtcatcgc
      781 cttttcgccg ctcgcccagg gcgtgttgtc cggcaaatat tccaagggcc gcgacggcac
      841 ccgggccggc gagcgcaatt cctcgatcgg cgcccgggcg ctggcgccga aggtgctggc
      901 ggcggtcgag gcgctcggca agatcgccag ggcccgcaag cagacgctgg tgcagctggc
      961 gctggcctgg gtgctgcgcc gccccgagat gacctcggcg ctgatcggcg tgcgcaccct
     1021 cgagcagctc aaggactgcc tcggcgcgct cgacaacctc gcgttcaccg cccgggagct
     1081 cgcggcgatc gacaccgccg tcaagggcgc catgctcgac agccggccgc aggtctgagc
     1141 ccgtcgatga cttaccgaac ggcaatggcg accgggctca cctggctgat cctgctctcg
     1201 ctgctcgtgc tgccgccgct gcacggcaac ctgctgggct acatcgccat gggcgccgcc
     1261 atcatcggcc tcgtggccgt gtgggacctc ggcgcctacc gcgaggtctt cggccggccc
     1321 tggatctgga tgatcgtcgg cgcctatgcc tgcctcgcga tcgccatcgt gggggtggca
     1381 aagaccgccg gcgagacgct caccgtcgtc gacttcgtgc ccttcctgct ggtcatcccg
     1441 gccgccgcgc tgttcgcccg cgcccgcctc gccgaaccgc tctcgaccat cgccgccctg
     1501 tcgctcggcg gcacgctggt gtcgctggcg atctgcctga cccagatcgc cctctaccac
     1561 gcccggcgcc ccggcggctg ggagatgagc cccatccatt tcggcgactt cgccgtcatt
     1621 ctcggtttcc tgtcgctggg cggattgctg gtgcctggtg cccgctggcg cgccatgtac
     1681 tgggccgggc cggccatcgg gctcgtcgac ggcatgctca ccggcacgcg cgccagcctg
     1741 gtcgtcgggg tctgcctgct gccgctggcc ggctatttcg tgtggcggca cggccccggc
     1801 cgccgcgccg cactgctgct tgccggcgcc gtcgtggtgc tgctcgccgt gccgctggcg
     1861 ctctccgccg agggcagcgt cggccgctcg cttggcgcct atcaggtcat cgaccaagtc
     1921 gcccatggcg acgaggtgac cgacagttcc gccgcctacc ggctcgacca gtacaccgct
     1981 gccgtgcgcg ccttcttcga cgcgccggtc ttcggccacg gctggcgcga ccaggtgcag
     2041 agcgcgctgc cctacatgtc ggccgagggc aaggccggct acgcgcgcga acactggggc
     2101 tacatccacg acgaattcct cagcctcgcc gtcggcatgg gcgtcttcgg catcctcgcc
     2161 tggctgctgc tgatggccta ccccatcgtc gccgtgcgca ccgcgccacg cgacgccgaa
     2221 agtgccgcgc gcacctacct tggccttgcc gtgctggtcg gcatcggcgt ttccggcctc
     2281 accgacgtgc tgttcatgac cgaactgccc aaggtcttct tcggcttcct gccggctgca
     2341 ataatcctcc ttcggccagc cgcagtgccg gcacgggagg cttcggcgtg aacgccgtct
     2401 ttccgcccgg agcgatccac atcgccctga ccttcgacga caatttctgg gccccggcct
     2461 acgccgtcat gcgctccgcc tgcctgtcga cccggcggcg ccgcgacctc gtgtttcatc
     2521 tgggcgtcgc cggcatcact cccgggcacc ggctggacct cgaaaagatc gccagcgaat
     2581 tcggcgccac gcaggtcttc tacgatctca cccagaacca ggatttcctg cgcatctgcg
     2641 gcccgctgcg ggccagcaag cgcttcccgc cgatcgccta cgcgcggctg gtgctcgacc
     2701 gcatcgtgcc cgacagcatc gagcgcatca tctacctcga cagcgacacg ctggtgatca
     2761 agccgatcga atggctctac gaccaggaca tgcagggcaa tccgatcgcc gccgtgtcgg
     2821 acccgttcgg catgcacatc atgatgggcc gcgacatgcg cgccaaggcc ggcatcttcg
     2881 atcccgccga cccctacttc aactccggcg tgctgctcat cgacatggcc ggattccgtg
     2941 ccgccgatgt ccccaagcat cttgccggtt tcgtcaagaa cgatcttcta cgacggctct
     3001 atttcgacca ggacatgctg aacctgatct tccgtggccg ctggacggcg ctcaactggc
     3061 gcttcaacac catcgatccg tggcgggcgc agcaggcgat gggtccctac atcatccact
     3121 acaccggcga ccagcgcccc tggcatctgc tcagcctggc gccgttccac cacatgtacc
     3181 ggcacaccat gaccaacgag ctgttctacc ggttctggcg ccaccgtatc aggcagcgct
     3241 ggaagaagcg cttcaaccgg ctcctcggac gccagtgatg gacctgccgg tcgtctgttc
     3301 gttctggcac ggcgagctga gctggctcga gcggctctgc atcagctcct acatcgaacg
     3361 cggccaccgc ttccggctct acacctatgc cacgctcgac ggcctgccgc cgggctgcga
     3421 ggccgccgac gcgggggccg tcgtcccgca ggatgaaatg ttcttctaca agggcagccg
     3481 gacgccggcg gtcttcgccg acctctttcg cctccggctg atgcaggcgg aagccggcat
     3541 ctgggtcgat tgcgactgct attgcgtgcg cccctatgcc gggctcggcg attacgtcta
     3601 cggcatcgaa ggcagctggg acggcaagcc gacgagcccc cagctggtca acaacgcggt
     3661 gttccgctgc cccgcgaaca gcgagctgct ggccgcgctg ctcgccacct tcgcgcctgg
     3721 tgcgatcccg cccggcatgc cctggcatcg cgccgcggag gtgcgcctgc gccgcttgtt
     3781 cggcgaaacg ctgccggtcc agaacatgca gttcggcgcc accgggccct ggccgctgaa
     3841 ccatcatctg aagcggctgg gcctgtttgg ccgggcccag cccaagccgg tgttctaccc
     3901 gatgaattac gggcaggccc cgctcctgct cgcgccgggc cgggacctgt ccgcgatgat
     3961 ccggccggag accctcagcg cgcatttctg gcacagctcg ctgaccgatc gcggcaccgg
     4021 caagccggcg ccgccgcagc ccggcagctt tttcgcccgc gagatcgagc ggcttaagct
     4081 gtcgctctag cggcgcgcga gagcgacagc taggtgcgca gcaccgcccc ggtcgccttg
     4141 ccgacagcgg cgacgatggc cgccgccacc ttgtcgattt cctcgtcggt gagggtgcgg
     4201 tcgaccggct gcagcgtggc acggatggcg atggacttcc ggtcctcgcc gacaccggca
     4261 ccctcgaaca aatcgaatac cgtgacgtcg gtgatcagcg ccttgtcggc gttgcgggcg
     4321 gcccgcagca ccatcgccgc cgccacgtcg cggccgacga cgaaggcgaa atcgcgctcg
     4381 accggcatca ggtcgctgag cttcagcgcc ggcttgctgc gcgtcggctt gcgccgcggc
     4441 tcggggatgg catcgaggtc gagctcgaac gccaccaccg gcccggccag gtcgagttcg
     4501 ctcgccagcg ccggatgcag ctcgccgaac cacgcgatgg cgagcttcgg ccccagctgc
     4561 acgcggccgc cgcggccggg gtgcgcccag tcgggcgcct cgctgctcag ctgcagcttg
     4621 tcgagatcgt gcccgagccc gtcgagcacg gcgccgaggt ccgccttggc gtcgaacacc
     4681 gtcagcttct gcgcgccctg ccagtcgcgg gccgaagcac ccgcgcggat cgccgtggca
     4741 taggtatgct gcccctccgg caggtcgctg aggaacacct ggccgacctc gaacagcccg
     4801 atgtcgcgca cgccgcgatt gccgttgcgc cgcgccgcgg ccagcagccc cggcagcagc
     4861 gatggccgca tgtccgaaag atcggcggcg atggcgttgg ccagcctgag ctgcggcgcc
     4921 ccgccgccga agcgcttcgc ctcggccgcc gaaatgaacg accacgtcac cgcctcgtcg
     4981 agcccgcgcg ccgccagcag ccgcttggcc gcgcggcggc ggttctgcat caccgtcagc
     5041 atgcgcgggg cgacgccggt gagccgcggc aacgggtcca ccggcacctt gtcgacgccc
     5101 tccatgcgca tcacttcctc gacgaggtcg gccttctgcg tcacgtccgg ccgccatgac
     5161 ggcaccctca cctggagcgt cgctccagaa ccggcaacgg tgaagccgag acgggcaagg
     5221 atgtcggcga tgcgcgccgg cggcagctcc agtccggtca gccgccgtac ttcgctcaac
     5281 gggaaatcga tgaccgtgcc ggcgccttcg acatggcctg cgacgaccac ctcatgcgcg
     5341 ataccgccgc agagctcgag gatcagccgc gtcgcaagct cgatgccggg cagcaccgac
     5401 tccgggtcca cggtacgctc gaagcggtag cgcgcgtccg agacgatgcc gagcttgcgc
     5461 ccggcctgcg ccaccgccat cggctcgaac caggcgctct cgacgaacac attgaccgtc
     5521 gcgtcgttcg aacccgtggg ctcgccgccc atgatgccgg cgatgcccac cggcccgctg
     5581 gcgtctgcga tcaccggaat tgtcgggtcg agcgcgtagc tgcggccatc gagggcgagc
     5641 agcgtctcgc ccgccttcgc catccgcgcc tgcaccgggc cggtgagctt gtccgcgtcg
     5701 aatacatgca gcggccggcc gcgatcgatc gtcacatagt tggtgatgtc gaccagcgcc
     5761 gagatcggcc gcaacccgat ggcccgcagc cggtcctgca tccatcgcgg cgacgggccg
     5821 ttccggaccc ccgcgatcag ccggccggca aacatccggc aggcctgcgg ctcgccggcg
     5881 ccgaaatgca ggtccacgcc gatcgggctc gtgccgcccg gcgagggctg cggcgcgatg
     5941 gcgccgtccg tcagtgtgcc gagcccatag gccgcaagat cacgcgcgat gccgcgcacg
     6001 ctggtggcgt cgccgcgatt gggcgtgatc gagacgtcga acaccgcgcc gccgatcccg
     6061 gcatactcga catagggcat gcccaccggc gcgtcgtcgg gcagcacgat gatgccgtca
     6121 tggtcttcgc tgagctgcag ttcggccgcg gaacacagca tgccgttgct cggcgcgccg
     6181 cggatgacca ctcccgcctt cagctcgaaa tccttgcccg gaatccaggt gccggggaag
     6241 gcgaacaccg atttcatgcc gctcgccgcg ttcggcgcgc cgcacaccac gtcgatcagc
     6301 gtcccggtac cggcgtcgac cttgcacagc ttgagatggt cggaattggg atgcggcttc
     6361 gcctcgacca ccctggcgac gacgaacggc tgcagcgcct tgccctgctc ctcgacgctc
     6421 tcgacctcga gcccgaccgt cgtcagcgcg gtcgaaatct cgtccacgct ggcgcgcgtc
     6481 tcgaggtgat cctgcagcca gtcgagggtg aacttcatct gtagacactt tcggtcgctt
     6541 cgatcctggg caggccgccc gagatcgaga agagtttggc gagaacgttg gcaaagccgc
     6601 gcgcgtcgtc gatggcgcgg tgcgtgtgga cgatgttgcc gtaccattcc ggcggcaccc
     6661 gctgcatgcc ccatttgagg tactcggcgc cgcgcagcgt gcccgccatg gtgtagaggc
     6721 agaccccgcc gccgcgaaag atctgccgcg tcttgaaggg cccgccaagc acccgcgtgc
     6781 cggcgaaggt ttcgagatag tggtccatcc acagcccgtc gaagatgatc ggcgccgccg
     6841 cgaacacatg gaagccgggg agggcctcga cccagtcggc atagcgcggc atgacgattt
     6901 cggc
//
LOCUS       DATAZA010000232        11746 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_605879, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000232 DATAZA010000000
VERSION     DATAZA010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 11746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11746
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_605879"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..678
                     /locus_tag="VHZ56_05860"
     CDS             <1..678
                     /locus_tag="VHZ56_05860"
                     /inference="COORDINATES: protein motif:HMM:NF028221.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297530.1"
                     /translation="ANETAALKAAIRSNRTTMHGAVTASFLLTMRQRYGIDAMTVLST
                     IDLRRLSKPVLPQETYGCYIDILRTKNPISADFWDTARDASFRLISTLAKDQEPASIL
                     KLFDWEVYRQELGPLIANHRRIDGLAVTTAGESGLRRDYGAFELEDVTMAVSLDLFGP
                     SLFVVASEREGGMDISVGYAADAVGDDEAAALAEGAVALLTLKTGENIGASGETAPQR
                     TTDRQLN"
     gene            complement(694..819)
                     /locus_tag="VHZ56_05865"
     CDS             complement(694..819)
                     /locus_tag="VHZ56_05865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297531.1"
                     /translation="MLKLSLVVLFALALATLSFAASALPTPDSSSATAPVADVGP"
     gene            complement(970..2427)
                     /locus_tag="VHZ56_05870"
     CDS             complement(970..2427)
                     /locus_tag="VHZ56_05870"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX4297532.1"
                     /translation="MPARILSALDKAGFITPTPIQAKAIPPQLQGRDILGIAQTGSGK
                     TAAFGLPIIAGISELSGRPSPMTTRALILAPTRELAVQIEEVLQKLSAGMRLNTVLVL
                     GGVSRNAQVQKIARGTDVVIATPGRLKDLIDDRKLRLNETRWLVLDEADRMLDMGFIH
                     PVRQIAAAIGPRRQTALFSATMAPEIAELAKGLLNDPVRVEASPPATTVGTLDQRVIM
                     AGSKQKRDELNTLLADPALKSVLIFSRTKHGADKVAKNLAIDGHDAAAIHGNKSQNAR
                     QAALKGFASGRVRILVATDIAARGIDVPNITHVINYELPDDPENYVHRIGRTARNGAS
                     GFAITLCDGTERGKLRDVERLIRRTLPVSGELKGAEAKLADAPKGHRGQGQQPAARSG
                     EQRPQRNAGRHFSGAKKAAIGEARAQQKKPQARPAAKREAPVAAPGGAPASATWWEKP
                     TGSGNARPPKARWSKGQKDAARTKPAGRPRERVTA"
     gene            complement(2712..2948)
                     /locus_tag="VHZ56_05875"
     CDS             complement(2712..2948)
                     /locus_tag="VHZ56_05875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297533.1"
                     /translation="MLRLQIIYQRRRKLLVRLGALLALGAGAVLAIAPLPRAAANDIA
                     VSRPAVLSDAMRLLLLPAPVASRQFLAAYTIAYH"
     gene            complement(3076..3624)
                     /locus_tag="VHZ56_05880"
     CDS             complement(3076..3624)
                     /locus_tag="VHZ56_05880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297534.1"
                     /translation="MLRSWKYIAAWAALFVALALPASVLAQAAPAAPAPAGAPPSLML
                     AAQPGFFTGKWVYRSFSVSADSKATLAKLALGINELTLTESKGQLSGERTGQGVKYPL
                     QGSALYAPKQGATIRLHGTATIGGKTYNYDYFGYLIPSWSVGGAQPDTIMGTVLRTDP
                     TNPADAPLVASFAATREAAATK"
     gene            complement(3725..4516)
                     /locus_tag="VHZ56_05885"
     CDS             complement(3725..4516)
                     /locus_tag="VHZ56_05885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013531947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX4297535.1"
                     /translation="MASLIYSRRTFLTASAAGASSLLLAGCDQFDFLGQTGQPIRSVL
                     ERANSLTYAAQRLIAGQQALARTYSASEIQQPQRPNGSTDPQTADYLALKANNFADYR
                     LMVTGLVEKPLSFSLDELRNMPAQSQITRHDCVEGWSCISKWTGTRLGPLLDQAKPTA
                     AARFCVYHCYDDMGGSLAGPNYYYESSDLVDAYHPQTLLAYGLDDQTLPVANGAPVRI
                     RIERALGYKQPKFVHTIELVDSFAPFSGGRGGYWEDNGYDWYGGI"
     gene            complement(4518..5372)
                     /locus_tag="VHZ56_05890"
     CDS             complement(4518..5372)
                     /locus_tag="VHZ56_05890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEX4297536.1"
                     /translation="MISHDRHEVGVDARLIYRQSGLTRITHWVWAVAMFFLLLSGLQI
                     FEARPNLYIGQQSGFGFSNDILDIGAANTPNGPRGTTQIFGQTFDTTGWLGMSGDAAN
                     PDFTAFPAWATIPSFRDLATGRVVHFFFAWILVGTLAIWLINALFSGHLWRDIILKPR
                     DISGLPRDIVDHIRLRFTHGKSYSPLQKVAYFGIFIIAFPLIIATGLTMSPGMDTAFP
                     WLLDLFGGRQTARTIHFITMLAFVLFFVVHIIMVLLANPINELRSMITGYYRASAPHD
                     PDTEGKGH"
     gene            complement(5842..6489)
                     /locus_tag="VHZ56_05895"
     CDS             complement(5842..6489)
                     /locus_tag="VHZ56_05895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThuA domain-containing protein"
                     /protein_id="HEX4297537.1"
                     /translation="MRSALIVWGGWDGHEPEECAAIYRRWLHEDGFSVRVETDTAVFG
                     DPAIRDLSLIVPIYTMSKIEREHAQNFAKAVEGGVGVGGHHGGMSDAFRDSVDYQFVI
                     GGQWVAHPGNIIDYTVEVTKPDDPIMQGIPASFPYHSEQYYMHMDPAVEVLATTTFSG
                     EHAAWTKGVVMPVAWKHRYGAGKVFHSTLGHRASEFEVPEMATILRRGINWAARD"
     gene            complement(6575..7213)
                     /locus_tag="VHZ56_05900"
     CDS             complement(6575..7213)
                     /locus_tag="VHZ56_05900"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015314693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX4297538.1"
                     /translation="MGNWVAKFDRKSWLLSEFNTWYYNRRIWVLSRHLARAIPNRGSV
                     LDIGCGDGQLALALMRLRPDLKIEGVDVVPRPKTMIAVSHYDGLKLPFADRSFDYVTI
                     VDVLHHTDDPAVVLAEASRVARQGVVVKDHLREGPLAQATLAFMDWFGNIGDGVPLPY
                     NFLSRSEWQGAFFKARLQLVQTTERLGIYLPPARWLFDRNLHFVSFLTPKAA"
     gene            complement(7233..7661)
                     /locus_tag="VHZ56_05905"
     CDS             complement(7233..7661)
                     /locus_tag="VHZ56_05905"
                     /inference="COORDINATES: protein motif:HMM:NF016060.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HEX4297539.1"
                     /translation="MSLESLMRETMAEDRPSPVLRQLLTFLVIGATAALAFVGLSAAA
                     TALPTGLPRWLVSAICYALFIVPVYLLHRRYSFRSSVPHGQALPRYVVVQVSGLALAT
                     GFSWICYSVFGLPTLPAALLVIGLTSGVNFVVLRLWAFSI"
     gene            complement(7750..8001)
                     /locus_tag="VHZ56_05910"
     CDS             complement(7750..8001)
                     /locus_tag="VHZ56_05910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEX4297540.1"
                     /translation="MDIVWAIIVGFFAGIIAKLVTPGGPNPRGFILTTVLGIVGSVVA
                     TYLGQAIHLYGPGDTANFLAQIIGAIIILLIWRQVVRAR"
     gene            complement(8058..9104)
                     /locus_tag="VHZ56_05915"
     CDS             complement(8058..9104)
                     /locus_tag="VHZ56_05915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018326804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4297541.1"
                     /translation="MRLLILGTGGMAKHHAEHFAAIDGVTVVGGVDVDPNRLAAFQAA
                     HNIEHGFASLDAALAWGDFDAVANVTPDSIHHPTSIAALRGGKHVFCEKPLATDATKA
                     FEMVDVAEKSGLINMVNLTYRNVAQLQTAREIVTSGQIGAVKHVEASYLQSWLSSKAW
                     GDWRTESKWLWRLSKKHGSNGVLGDIGVHILDFASYGAGLDIEHVFARLKTFDKAPGN
                     KIGEYELDANDSFTMAVDFSNGALGVIHATRWATGHFNELRLRVYGERGGVEVQHRHD
                     GSRLRVCLGEDVETGTWKEMEAPAVPTNYERFAGAVRSGKNQQPDFRHAAELQRVLDL
                     AMVSDTEHKELATH"
     gene            complement(9119..9892)
                     /locus_tag="VHZ56_05920"
     CDS             complement(9119..9892)
                     /locus_tag="VHZ56_05920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003525739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThuA domain-containing protein"
                     /protein_id="HEX4297542.1"
                     /translation="MPIRATVWGENVHEQKNKAVAENYPKGMHGQIAAVLQEDPNIKA
                     STVTLQDPEHGMTEAKLNETDVLLWWGHAAHNQVDDAIVERVAARVWQGMGLIVLHSG
                     HHSKIFRKLMGAPANLHWREAGERERLWVVNPGHPIAKGLPAYFELENEEMYGEPFSV
                     PEPLETVFVSWFQGGEVFRSGLTYRRGAGNIFYFRPGHETYPTYHDKTVGKVLRNAVN
                     WAFNAERHAELMTAPNTPVDKAIEKIVERGEKLTNHPKA"
     gene            complement(10025..11035)
                     /locus_tag="VHZ56_05925"
     CDS             complement(10025..11035)
                     /locus_tag="VHZ56_05925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017991311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4297543.1"
                     /translation="MAELQLKNVRKSFGAVEVIKGVSLEIKSGEFMVFVGPSGCGKST
                     LLRLVAGLEDITSGTLEFDHEVVNGLPPSKRGIAMVFQSYALYPHMTVYDNMAFGMQL
                     AKSSKEAIKARVEQAADLLQIRQYLDRLPKQLSGGQRQRVAIGRAIVRDPKVFLFDEP
                     LSNLDAALRVATRLEISKLHHSMNNVTMIYVTHDQVEAMTLADRICVLRDGLVEQVGS
                     PVELYENPQSMFVAGFIGSPKMNFINGERAAGFGATNIGVRPEHIEIGAGEGAWKGKV
                     IHSENLGSDSFIYVDIGGGEPITVREDGIKKHQADEAISIRPAPGKIHRFDAAGKPMG
                     RA"
     gene            complement(11048..>11746)
                     /locus_tag="VHZ56_05930"
     CDS             complement(11048..>11746)
                     /locus_tag="VHZ56_05930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004687446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX4297544.1"
                     /translation="YWPTQFSLDNYLAVFDSGSFPRNLLNSIVVSALTVACALVFAVT
                     AAYALSRIRFRGRSLLLLTILSVSMFPQIAVLAGLFEVIRAFGLYNTLWGLVFSYTIF
                     TLPFTVWVLTTFMRDLPIEIEEAAIVDGAKPWTIVTRVFMPLMWPALVTTGLLAFIAA
                     WNEFLFALTFTADNATRTVPVAIAQLTGASQFEIPWGVIMAASVIVTVPLVVLVLIFQ
                     KKIVSGLTAGGVKG"
BASE COUNT         1999 a         3833 c         3970 g         1944 t
ORIGIN      
        1 gccaacgaga cggcggcgct gaaagctgcc atccgctcca atcgcaccac catgcacggc
       61 gcggtcaccg cctcgttcct gctgacgatg cgccagcgct acggcatcga cgcgatgacg
      121 gtgctgtcga ccatcgacct gcgccgcctg agcaagcccg tgctgccgca ggagacctat
      181 ggctgctaca tcgacatcct gcgcaccaaa aatccgatca gcgccgattt ctgggatacc
      241 gcccgcgatg cctcgttccg gctgatctcg accctcgcca aggatcagga gccggccagc
      301 atcctcaagc tcttcgactg ggaagtgtac cgccaggaac tcggcccgct gatcgccaac
      361 catcgccgca tcgatggcct ggcggtgacc accgccggcg agtccgggct gcgccgggac
      421 tatggagcgt tcgaactcga ggacgtgacg atggccgtgt cgctcgacct gttcggcccg
      481 tcgctgttcg tcgtggcgag cgagcgcgag ggcggcatgg atatttcggt aggctacgcc
      541 gcggacgccg tcggcgacga cgaggcggca gctctggccg aaggtgcggt cgctctgctg
      601 acgctgaaaa ccggggagaa tatcggggcc tcgggcgaga ccgcgccgca gcgcacgacg
      661 gaccgccagt tgaactagga gcccatccgg ccgctaggga cccacgtccg ccaccggtgc
      721 ggtggcggac gacgagtccg gtgtgggaag agcggacgcg gcgaagctca gcgttgcaag
      781 agcaagagcg aagagaacca ccagcgacag cttgagcatg actgctctcc acaccaatcg
      841 ttggggccac aatgcggtcc ggcggttgaa cgttcccgca atcacccgtt tagccggcat
      901 tcatcggcaa ggcgggtcgc cgaaagaaaa aggcggcccg caggccgcct tcgttgtgct
      961 gtgtttggat caggccgtga cgcgttcgcg cggccggccg gccggcttcg ttcgcgcggc
     1021 gtccttctgg cccttgctcc agcgtgcctt tggcggccgg gcattgccgg agcccgtcgg
     1081 cttctcccac cacgtcgcgc tggccggtgc gccgccgggg gcggcaaccg gcgcttcgcg
     1141 cttggccgcg ggccgggcct gcggcttctt ctgctgggcg cgggcctcgc cgatggcggc
     1201 cttcttggcg ccggagaaat gccgtccggc attgcgctgc ggccgctgtt cgccgctgcg
     1261 ggccgccggc tgctggccct gcccacgatg gcccttgggc gcatcggcga gcttggcctc
     1321 ggcccccttg agttcaccgc tgaccggcag ggtgcgccgg atcagccgct cgacgtcgcg
     1381 cagcttgccg cgctcggtgc cgtcgcagag cgtgatcgca aagcccgagg cgccattgcg
     1441 cgccgtgcgg ccgatacggt gcacgtagtt ctccggatcg tcgggcaact cgtagttgat
     1501 gacgtgggtg atgttcggaa cgtcgatgcc gcgcgccgcg atatcggtgg cgacgaggat
     1561 gcggacccgg cccgaggcga agcccttcag cgccgcctgc cgggcgttct ggctcttgtt
     1621 gccgtggata gccgcggcgt catgcccgtc gatggcgagg ttcttggcca ccttgtcggc
     1681 gccgtgcttg gtccgcgaga agatcaggac gctcttcagc gccggatcgg cgagcagcgt
     1741 gttgagctcg tcgcgcttct gcttggaacc ggccatgatg acgcgctggt cgagtgtccc
     1801 gaccgtggtt gccggcggcg aggcttcgac gcgcaccgga tcgttgagca ggcccttggc
     1861 gagctcggcg atctcgggcg ccatggttgc cgagaacagc gccgtctgcc gccgcggccc
     1921 gatggccgcc gcgatctgcc gcaccggatg gatgaagccc atgtcgagca tgcggtcggc
     1981 ctcgtcgagg accagccagc gggtctcgtt gagccgcagc ttgcgatcgt cgatcaggtc
     2041 cttgaggcgg ccgggcgtgg cgatgacgac atcggtgccg cgggcgatct tctggacctg
     2101 cgcgttgcgc gacacgccgc cgagcaccag cacggtgttg agccgcatgc cggcgctgag
     2161 cttttgcagc acttcctcga tctgcaccgc gagttcgcgg gtcggcgcca ggatcagggc
     2221 gcgcgtcgtc atcgggctcg gccggccgct aagctcggag atgccggcga tgatcggcag
     2281 cccgaaggcc gcggtcttgc cggagccggt ctgggcgatg ccgaggatgt cgcggccctg
     2341 cagctgcggc gggatggcct tggcctggat cggcgtcggg gtaatgaacc cggctttgtc
     2401 gagggcgctg agaatacgcg ccggcaggcc gagtgtggtg aaggttgaat gggtcaaaag
     2461 acgactttca ttggcgcgcc ggaccatgca gcgcgcagcg ccgcgcattg aggcggcggg
     2521 tcaaaacagg tgcaatcggg cgattgggat cgcgcgggtg cgtttgaacc cgggatggtc
     2581 tccgggtcac ttcgccgctc accgctaaca atcgataaga agagaagtag tcgtgcgctc
     2641 tgggccgaag cctctcgcgc aacgtcgctc atatggggga agccgccgcg gaaagcaagc
     2701 ggcgatgtcg gtcaatggta agcgattgtg taggcggcaa gaaactgccg gctcgccacc
     2761 ggggccggca acagcagcag gcgcatggca tcggaaagga ccgccggacg cgacacggca
     2821 atgtcgttgg cggcggcgcg cggcagcggc gcgatcgcca gcacggcacc ggcgccgagc
     2881 gccagcagcg ccccgagccg gaccagcaac ttccgccggc gctggtagat gatctgcagc
     2941 ctgagcatgg cccaccttcc ggtgagcgtc acatagcaga cgccgggccg cccgaagaga
     3001 acgacctttt agcgtggtat gggagttgct aacgaacggc ccggccgcgc gccgtgttgg
     3061 cgcgccccgg gtcggctatt tggtggctgc tgcttcgcgc gtcgcggcga acgatgccac
     3121 cagcggcgca tcggccggat tggtcggatc ggtccgcagc accgtgccca tgatggtgtc
     3181 gggctgcgcc ccgccgacgc tccacgacgg aatcaggtag ccgaaatagt cgtaattgta
     3241 ggtcttgccg ccgatcgtgg cggtgccgtg caggcggatc gtcgcgccct gcttgggagc
     3301 atagagggcg ctgccctgca gcgggtattt caccccctgc ccggtgcgtt cgccgctcag
     3361 ctgccccttg ctctcggtca gcgtcagctc gttgatgccg agtgcgagct tggcgagcgt
     3421 ggccttggaa tcggcgctca ccgaaaagct gcggtacacc cacttgccgg tgaagaatcc
     3481 gggctgcgcc gccagcatca gcgagggcgg cgcgcctgcc ggcgcggggg cggcaggagc
     3541 cgcctgcgcc aggacactgg ccggcaacgc cagcgcgaca aagagcgcgg cccaggccgc
     3601 gatgtatttc caggaccgaa gcatggcacc ccccgcagag tcagacagcg ataccctagc
     3661 agacggagcc cgccggacgc caacaatgta aatcaaaggt taacgatgcc gcaggccggg
     3721 cgccctagat gccgccgtac cagtcgtagc cattgtcttc ccagtagccg ccccggcccc
     3781 cgctgaacgg cgcgaagctg tcgaccagct cgatggtgtg gacgaatttc ggctgcttgt
     3841 agccgagcgc gcgctcgatg cggatgcgga ccggcgcgcc gttggcgacc ggcagcgtct
     3901 ggtcgtcgag cccgtacgcc agcagcgtct gcggatgata ggcatccacc aggtccgagc
     3961 tctcgtagta gtaattgggg ccggcgagcg agccgcccat gtcgtcgtag cagtgataga
     4021 cgcagaagcg tgcggcggca gtaggcttcg cctgatcgag cagcggaccg aggcgcgtcc
     4081 cggtccattt ggagatgcag ctccagccct cgacgcaatc gtgccgggtg atctggctct
     4141 gcgccggcat gttgcgcaat tcgtcgagcg agaacgacag cggtttctcg accagcccgg
     4201 tgaccatcag gcggtagtcg gcaaaattgt tcgccttcag cgccagatag tccgcggtct
     4261 gcgggtcggt cgagccgttc ggccgctgcg gctgctggat ttcgctggca ctgtaggtgc
     4321 gcgccagcgc ctgctggccg gcgatgaggc gctgcgctgc gtaggtcagg ctgttggcgc
     4381 gttcgagcac gctgcggatc ggctggccgg tctggccgag gaaatcgaac tggtcgcagc
     4441 cggccagcag caggctcgag gctccggctg ccgaagcagt gaggaaggtc cggcgggagt
     4501 agatcaggct ggccatctca gtgccccttg ccttcggtgt ccgggtcgtg cggcgcgctc
     4561 gcccggtagt agccggtgat catcgagcgc agttcgttga tgggattggc gagcagcacc
     4621 atgatgatgt ggacgacaaa gaacagcacg aacgccagca tggtgatgaa gtggatcgtg
     4681 cgcgctgtct gccggccgcc gaacaggtcg agcagccatg gaaacgcggt gtccatcccc
     4741 ggcgacatgg tcaggcccgt tgcgatgatc agcgggaagg cgatgatgaa gatgccgaaa
     4801 taggcgacct tctgcagcgg cgagtagctc ttgccgtgcg tgaagcgcag ccggatgtgg
     4861 tcgacgatgt ccctgggcag cccgcttatg tcgcgcggct tgaggatgat gtcgcgccac
     4921 aggtgcccgc tgaacagcgc attgatgagc cagatggcga gcgtgccgac gaggatccag
     4981 gcaaagaaga agtggaccac ccggccggtc gcgagatcgc ggaacgacgg gatcgtcgcc
     5041 caggcgggga acgccgtgaa atcgggattg gccgcgtctc cgctcatccc gagccagccg
     5101 gtggtatcga aggtctggcc gaaaatctgc gtcgtgccgc gcgggccgtt cggcgtgttg
     5161 gcggcgccga tgtcgaggat gtcgttggaa aagccgaacc ccgactgctg gccgatatag
     5221 aggttgggcc gcgcctcgaa aatctgcagg cccgagagca gcaggaagaa cattgccacc
     5281 gcccacaccc agtgggtgat gcgcgtcagg ccgctctggc gatagatcag tcgggcatcg
     5341 accccgacct cgtgccggtc atgcgagatc atgcccgtga gcgccccgag gaagccgagg
     5401 acaaccggca ccgccagcgc ccagctgaag ctcttgaaga cgatgcagcc tgcgagccag
     5461 aacagcgccc ccaccagcgc caccgcgccc ccgagaccca gttgcgacag cgccacgagg
     5521 ccacccgcca gcatgaacac cgccgccgcc gcgagcagcg acagggtgat cccgtcggtg
     5581 gactggtcgg tgccgagcgg cacggcagcc ggggcataga gcagcagggc gatgatggcg
     5641 gcaccggcaa tcgccccgag gatgctcagc gccgccgaac tgcgccgggc tccgggctcg
     5701 aaccccgccg gcgccccctg ctcgatcact gccatgctcg ccccctgcgc agcggtactg
     5761 tcgataaggt gagaaacggc actgttccgg gccaagtttc aagtcacgtc ttgccaccgg
     5821 cccgtgatta tttgtgagcg ctcagtcgcg cgccgcccag ttgatgccgc ggcgcaggat
     5881 cgtcgccatc tccggcacct cgaattcgct cgcccggtgg cccagcgtcg agtggaacac
     5941 cttgccggcg ccgtagcggt gcttccaggc caccggcatg accacgccct tggtccaggc
     6001 cgcgtgttcg cccgaaaacg tggtggtcgc gagtacttcg accgccggat ccatgtgcat
     6061 gtagtactgc tcggaatggt acggaaacga cgccggaatg ccctgcatga tcggatcgtc
     6121 gggcttggtc acctcgaccg tgtagtcgat gatgtttccc gggtgggcca cccactgccc
     6181 acctatgacg aactgatagt cgaccgagtc gcggaacgca tcgctcatgc cgccatggtg
     6241 gccgccgacg ccgacgcccc cctccaccgc cttggcgaag ttctgcgcgt gttcgcgctc
     6301 gatcttgctc atggtgtaga tcggcacgat cagcgacagg tcgcggatcg ccgggtcgcc
     6361 gaacacggcc gtgtcggtct cgacccgcac cgaaaatccg tcctcgtgca gccagcggcg
     6421 atagatcgcc gcgcactcct ccggctcgtg cccgtcccag ccgccccaga caatcaacgc
     6481 actgcgcatc aaatcactcc gtcgaaaagc tggcggagct tatccaaatc gcccgaacgc
     6541 accagcccga atcatcggtt gttgccgatg cgggtcaggc ggccttgggc gtcaggaacg
     6601 acacgaagtg gaggttgcgg tcgaacagcc agcgggccgg cggcaggtag atgccgagcc
     6661 gctcggtggt ctgcacgagc tgcaggcggg ccttgaagaa ggcgccctgc cactcgctgc
     6721 gcgacaggaa attgtaaggc agcggaacgc cgtcgccgat attgccgaac cagtccatga
     6781 aggccagcgt cgcctgcgcc agcgggccct cgcgcagatg atccttgacc accacgccct
     6841 gccgggcgac ccgggaggcc tcggccagca ccaccgccgg atcgtcggtg tggtgcagga
     6901 cgtcgacgat ggtgacgtag tcgaagctgc ggtcggcaaa gggaagcttc aggccgtcat
     6961 agtgcgacac ggcgatcatc gtcttgggcc gcggcaccac gtcgaccccc tcgattttga
     7021 gatcgggacg cagccgcatc agggccagcg ccagttgccc gtcgccacag ccaatatcga
     7081 gcacgctgcc gcggttcggg atggcgcgcg ccagatggcg cgacagcacc cagatgcggc
     7141 ggttgtagta ccaggtattg aattcggaca ataaccacga tttgcgatcg aatttcgcga
     7201 cccaattgcc catgccgccc ccgtgcgatg cgtcagatag aaaaagccca gaggcgcaat
     7261 accacaaagt tgacgcccga tgtcagcccg ataacgagca gcgccgccgg taatgtgggc
     7321 aggccgaaaa cactgtagca aatccacgaa aagccggtgg cgagggcgag cccgctgacc
     7381 tgcaccacga cgtagcgcgg cagcgcctgg ccatgcggca cgctcgagcg gaacgaatag
     7441 cgccggtgca gcagatagac cggcactatg aacagcgcgt agcagatggc cgacaccagc
     7501 cagcgcggca atccggtagg gagcgccgtc gcggcggcgg aaaggccgac gaaggcgagc
     7561 gcagctgtcg cgccgatgac gaggaacgtc agcagttgcc tcagaaccgg cgacggccgg
     7621 tcctcggcca tcgtctcccg catcagactt tccagcgaca cgctcacccg gtccgcccgc
     7681 ttggtgccaa caggcaccca gcaagcgcag acggacgttg agaatcggtg aaaattacgt
     7741 cgtgggcgct cagcgggccc ggacgacctg ccgccagatc agcaggatga tgatggcgcc
     7801 gatgatctgg gcgaggaaat tggcggtgtc gcccggcccg tagagatgga tcgcctgccc
     7861 cagataggtc gcgaccaccg aaccgacgat gccgagcacc gtcgtcagga tgaagccgcg
     7921 cggattgggg ccgcccggcg tcaccagctt ggcgatgatg ccggcgaaga acccgacgat
     7981 gatggcccag acgatatcca tgacccagcc tccgattgcg gcagtcacat gggaagcgcc
     8041 gggacccctc gcaaggccta gtgcgtcgcc agttccttgt gctcggtgtc cgagaccatc
     8101 gccaggtcga gcacccgctg cagctcggcg gcgtggcgga agtccggctg ctggttcttg
     8161 ccggatcgca ccgcgccggc gaagcgctcg taattggtcg gcacggcggg cgcttccatc
     8221 tctttccagg tcccggtctc gacgtcctcg ccgaggcaga cccgcagccg cgatccgtcg
     8281 tgccggtgct gcacctcgac cccgccacgt tcgccataga cccgcagccg cagctcgttg
     8341 aagtggccgg tggcccagcg cgtggcgtgg atcacgccga gcgcgccgtt ggagaaatcg
     8401 accgccatgg tgaagctgtc attggcgtcg agctcgtact cgccgatctt gttgcccggc
     8461 gccttgtcga aggtcttgag gcgcgcgaac acgtgctcga tgtcgagccc cgccccgtac
     8521 gaggcgaaat cgaggatgtg gacgccgatg tcgccgagca cgccgttcga gccgtgcttc
     8581 ttgctgagcc gccacagcca tttgctctcg gtgcgccagt cgccccaggc cttcgagctc
     8641 agccagctct gcagatagct tgcctcgacg tgcttgaccg cgccgatctg cccggaggtg
     8701 acgatttcgc gcgccgtctg cagctgcgcg acgttccgat aggtcaggtt gaccatgttg
     8761 atgaggccgg acttctcggc gacatcgacc atctcgaagg ccttggtcgc atcggtcgcc
     8821 agcggctttt cgcagaacac atgcttgccg ccgcgcagcg ccgcgatgct ggtcgggtgg
     8881 tggatagagt cgggcgtgac gttggccacc gcgtcgaaat cgccccacgc cagcgccgca
     8941 tcgagcgagg caaagccgtg ctcgatgttg tgcgccgcct ggaacgcggc gagccggttc
     9001 ggatcgacgt cgacgccgcc gaccacggtg acgccgtcga tcgccgcaaa atgctcggcg
     9061 tgatgcttgg ccatgccgcc agtgccgagg atgagaagac gcattgcagg ctccgggttc
     9121 aggccttggg gtggttggtg agtttttcgc cgcgctcgac gatcttttcg atggccttgt
     9181 cgaccggcgt gttcggggcg gtcatcagct cggcgtggcg ctcggcgttg aacgcccagt
     9241 tgaccgcatt gcgcagcacc ttgccgaccg tcttgtcgtg gtaggtggga taggtctcgt
     9301 ggccgggccg gaagtagaag atattgcccg cgccgcgccg gtaggtaagc cccgagcgga
     9361 acacctcgcc gccctggaac cacgagacga ataccgtctc cagcggctcc ggcaccgaga
     9421 acggctcgcc gtacatctct tcgttctcga gctcgaaata ggccggcagc cccttggcga
     9481 taggatggcc cggattgacc acccagagcc gctcgcgctc gccagcctcg cgccagtgca
     9541 ggttcgccgg cgcccccatc agcttgcgga agatcttcga atggtggccc gaatgcagca
     9601 cgatcagccc cataccctgc cacacccgcg ccgcgacccg ctcaacgatg gcgtcgtcga
     9661 cctggttgtg cgccgcatgg ccccaccaga gcagcacgtc ggtctcgttg agcttggcct
     9721 cggtcatgcc gtgctcggga tcctgcagcg tcaccgtcga cgccttgatg ttgggatcct
     9781 cctgcagcac cgccgcgatc tggccgtgca tgcccttggg atagttctcg gccacggcct
     9841 tgttcttctg ctcgtggacg ttctcgcccc aaactgtggc tcggatcggc atgatgatct
     9901 ccttgaagtg ttggccgggc gcgcggagct taccgcgccg cctcggcaga gtgaacgcac
     9961 ggcccttgct ttgggtccgg ctgctgttgc tggatgcggg gggctggacg gacgccgctg
    10021 cgcgctaggc tcgtcccatg ggtttgccgg cggcatcgaa gcggtggatt ttccccggcg
    10081 ccggccggat ggagatggcc tcgtccgcct gatgcttctt gatcccgtct tcgcgcacgg
    10141 tgatcggctc gccgccgccg atgtcgacgt agatgaagct gtcggagcca aggttctccg
    10201 aatggatgac cttgcccttc caggccccct cgccggcacc gatctcgatg tgctcgggcc
    10261 ggaccccgat attggtggct ccgaacccgg cggcgcgctc gccattgatg aagttcatct
    10321 tcggcgagcc gatgaacccg gcgacgaaca tcgactgcgg gttttcgtag agctcgaccg
    10381 ggctgcccac ctgctcgacc agaccgtcgc gcagcacgca gatgcggtcg gccagcgtca
    10441 tcgcctcgac ctggtcatgc gtgacgtaga tcatggtgac gttgttcatc gagtgatgca
    10501 gcttggaaat ctcgagccgc gtcgcgacgc gcagcgccgc atcgaggttg gagagcggct
    10561 cgtcgaaaag aaagaccttc gggtcgcgca cgattgcccg gccgatggcg acgcgctggc
    10621 gctggccgcc ggacagctgc ttgggcagcc ggtcgagata ttgccggatc tgcaacaaat
    10681 ccgccgcctg ctcgacgcgc gccttgatcg cctccttgct gctcttggcg agctgcatgc
    10741 cgaaggccat gttgtcgtag accgtcatgt gcgggtagag cgcgtagctc tggaacacca
    10801 tcgcaatgcc gcgcttggat ggcggcaggc cgttgaccac ctcgtggtcg aactccagcg
    10861 tccccgaggt gatgtcctcg agcccggcga caagccgcag cagcgtcgat ttcccgcagc
    10921 cggacggacc gacgaacacc atgaactcgc cggacttgat ctcgaggctg acccccttga
    10981 tcacctccac cgcgccgaac gatttgcgga cgttcttgag ctggagctca gccattctcg
    11041 tttgccccta tcccttgaca ccgccggcgg tgaggccgga cacgattttc ttctggaaga
    11101 tcagcaccag caccaccagc ggcacggtga cgatcaccga ggcggccatg atgacgcccc
    11161 acggaatttc gaactggctg gcgccggtga gctgcgcgat ggcgaccggc accgtccgcg
    11221 tcgcgttgtc ggccgtgaag gtcagcgcga acaggaactc gttccaggcg gcgatgaagg
    11281 ccagcagccc cgtcgtcacc agcgccggcc acatcagcgg catgaacacc cgcgtgacga
    11341 tggtccacgg cttcgccccg tcgacgatcg ccgcttcctc gatctcgatc ggcaggtcgc
    11401 gcatgaaggt ggtcagcacc cagaccgtga acggcagggt gaagatggtg taggagaaga
    11461 ccagccccca cagggtgttg tagaggccga acgcccggat cacctcgaac agcccggcga
    11521 gcaccgcgat ctgcggaaac atcgacaccg acaggatggt cagcagcagc agcgagcggc
    11581 cgcggaagcg gatgcgcgag agcgcatagg cggcggtgac cgcgaagacc agggcgcagg
    11641 cgacggtcag cgccgaaacg acgatcgagt tcaggagatt gcgcgggaaa ctgccgctgt
    11701 cgaacaccgc gagatagttg tcgaggctga actgcgtcgg ccagta
//
LOCUS       DATAZA010000233         5706 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_374810, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000233 DATAZA010000000
VERSION     DATAZA010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5706
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_374810"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..590)
                     /locus_tag="VHZ56_05935"
     CDS             complement(<1..590)
                     /locus_tag="VHZ56_05935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003576311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4297545.1"
                     /translation="MPAFADDLVKVSYGTNWLAEAEHGGFYQAVADGTYKKYGLDVTI
                     VQGGPQAANEALLISGKIDFYMGGQFSLYDEIKQGIPVVNVAAIFQKDPQIFMSHKGV
                     GIDTFADLAKADTIFMGKDVFVTDFVWMKATFKGFHDEQYKPYTFNPAPFIADKMSAQ
                     QGYLTSEPLAVKQASGEEPNVFLLADNGYNGYSTTI"
     gene            886..1275
                     /locus_tag="VHZ56_05940"
     CDS             886..1275
                     /locus_tag="VHZ56_05940"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015317381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX4297546.1"
                     /translation="MHKPLSPSAIHPPFSAYSNGVEIPAGQKLVFCSGQLGIAADGTI
                     PPTAAGQAALCFDNIAAILAEAGLGLGHVVRLNAFVTGREHLRPYMDVRNTRFGAPLP
                     ASTLMVVSGFARPEFFVEIEAVAAGPA"
     gene            1287..2081
                     /locus_tag="VHZ56_05945"
     CDS             1287..2081
                     /locus_tag="VHZ56_05945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013531124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HEX4297547.1"
                     /translation="MPRRIWWTDFPAPEYDRIDPMRTIAILPIAAVEQHGPHLPVGVD
                     SILNRGCIDLLIERAPAELDLRILPVQQVGKSNEHTWARGTVTHTAHALIDAWFELGQ
                     SVSRAGIRKLVFVNSHGGNEEIMGIVARELRVREQMLVVKTGWTRFQPPDGMLTEVEK
                     RHGIHAGDLETSLMLHFRPDLVRMENARDFRSIAARDEQQFKYLRPTGTHAYSWIASD
                     LNPAGAVGDAASATAERGRIFAEAEVAGMLELIAEVERFPLPGTAD"
     gene            2173..3579
                     /locus_tag="VHZ56_05950"
     CDS             2173..3579
                     /locus_tag="VHZ56_05950"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HWE histidine kinase domain-containing protein"
                     /protein_id="HEX4297548.1"
                     /translation="MTDDAGRETASEARLRLALSFGNLAIWELDIEKNEVTVSPELNR
                     LYGFPEDARPSVAEYMSRYAPGEMERSQRLAAEAAARGDTKIELEVRHIWPDGTVKWL
                     LIRAEAAPPLPDGGPRALGVVVDITASKLAEEALRKSEQRLRLSQAAAGIVSFELDVA
                     TGEMVASDNFWPLWGLAPRATIHIDDIQRLVLPEASDAVSTAGDRANGTTTPRIQLQI
                     RRADDGQLRWLSRDLEFQRDGDGRPLKMYGVLRDITAAKQAEERQALLTHELQHRIKN
                     ILATVNAIASQTMRTGDLDTARENFMSRLRALSEAHNILTGTRWTDASLRSVLEAALA
                     PHSVTGRVQLAGEDMRLTPRMALSMALAVNELATNATKYGSLSAQSGRVEVSWRVAAD
                     ADGAEPELSWTWHESGGPPVVPPQRRGFGSVLIERVLGADFGGVVTMQYAPSGVIAEL
                     RVPVSNLPLPGGNEANGA"
     gene            3576..3944
                     /locus_tag="VHZ56_05955"
     CDS             3576..3944
                     /locus_tag="VHZ56_05955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006726522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4297549.1"
                     /translation="MTEADGKTVLVVEDEALLLFTIADDLRAAGFRVFEATSAPAALR
                     LLDTLGGIDVLFTDVDMPGGMNGLQLAQKVRDRWPAAAVLITSGHVNLGDGDLPRGGQ
                     FLAKPYIPASVISAIQIAAE"
     gene            4050..5408
                     /locus_tag="VHZ56_05960"
     CDS             4050..5408
                     /locus_tag="VHZ56_05960"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019170298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HEX4297550.1"
                     /translation="MRISIFGTGYVGLVTGACLADVGHDVLCMDVDVAKIARLGAGEV
                     PIFEPGLPEIVRRTMASGSLHFTSSTEAAVANAELQLIAVGTPPDEDGGADLSHVLAV
                     ASSIGRLMTGHKVVVVKSTVPVGTSDAVRSKLGEALGSRGAHLGFDVVANPEFLKEGA
                     AVGDFLKPDRIVIGTASAHARAVMTELYEPFNRNHDRTIYMDLRSAELTKYAANAMLA
                     TKISFINEMANLAERLGADIEQVRRGIGADPRIGYDFIYPGLGYGGSCFPKDVRALIH
                     TAAGIGYDAPLIAAVEAVNARQKQSLYARMAAHFGSLRGLTIALWGLSFKPNTDDMRE
                     APSRVLMEALWTAGARVRAFDPVAMAEAQRLYGDRPDLVLAPDKYAALEGADGLAICT
                     EWQQFRAPDFDEMGRRLKSRTIFDGRNIFAPERLREEGWTYLSVGRPAVLPAPVAVGT
                     AT"
     gene            5405..>5706
                     /locus_tag="VHZ56_05965"
     CDS             5405..>5706
                     /locus_tag="VHZ56_05965"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010914933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEX4297551.1"
                     /translation="MKILVTGAAGFIGFHVARRLLARGDAVVGLDNVNAYYDPALKQA
                     RLRLLADDRGHWEFRRADITDAIALDACFAGHRFDRVIHLAAQAGVRHSIDNPLAY"
BASE COUNT          923 a         1950 c         1895 g          938 t
ORIGIN      
        1 tcgatcgtcg tcgagtagcc gttgtagcca ttgtcggcca gcaggaacac gttgggctct
       61 tcgccgctcg cctgcttgac cgccagcggt tcggaggtga ggtaaccctg ctgcgccgac
      121 atcttgtcgg cgatgaacgg cgccggattg aaggtgtagg gcttgtactg ttcgtcgtgg
      181 aagcctttga aagtggcctt catccacacg aagtcggtca cgaacacgtc cttgcccatg
      241 aagatggtgt cggccttggc gaggtcggcg aaggtgtcga tgccaacgcc cttgtgcgac
      301 atgaagatct gcgggtcttt ctggaagatc gccgcgacgt tgacgaccgg gatgccttgc
      361 ttgatctcgt cgtagagcga gaactggccg cccatgtaga agtcgatctt gcccgagatc
      421 agcagcgcct cgttggctgc ctgcgggccg ccctggacga tggtgacgtc gagcccgtac
      481 ttcttgtagg tgccgtcggc gacggcctgg tagaagccgc catgctcggc ttcggccagc
      541 cagttggtgc cgtagctcac cttgacgagg tcgtccgcaa aagccggcat tgccgtgccg
      601 agcgcgagca acgcgctgag ggcgatccat gtggatgtcg tgcgcattct gtagtctccc
      661 tgttgagccc tgaagttccc cgtgtccggc cgcgttctga tgcgcagggc tgccggttgg
      721 tgccgcttcc ggcgccttgc ggcaattcat tgagccggcc tcaaaaaaag aaaagcctaa
      781 aatcgcggca cctgaccgat tgcccagatt ctcggcacgg cggtttggtt tagggctggc
      841 cttcagccgc ttttgccggt tagctgagca ccgacagaga cgttcatgca caagccgctt
      901 tcaccctccg caatccatcc gcccttttcg gcctacagca atggcgtcga aatccccgcc
      961 ggccagaaac tggtgttctg ctccggccag ctgggcattg ccgcggatgg caccattcca
     1021 cccacggcag cggggcaggc ggccctctgc ttcgacaata tcgcggcgat cctcgccgaa
     1081 gccgggctcg ggctcgggca cgtcgtccgc ctcaatgcgt tcgtgaccgg acgcgagcac
     1141 ctgcggcctt atatggacgt gcgcaacacc cgcttcggcg cgccgcttcc cgcctcgacg
     1201 ctgatggtcg tctcgggctt tgcgcggcct gaattcttcg tcgagataga agccgtggcc
     1261 gccggtccgg cttaggagag cacgagatgc cgcgcaggat ctggtggacc gatttcccgg
     1321 cccccgaata cgatcgcatc gacccgatgc ggaccattgc catccttccg atcgccgcgg
     1381 tggagcaaca cggtccgcat ctcccggtcg gcgtcgattc gatcctcaac cgcggctgca
     1441 tcgacctgct gatcgagcgc gctcctgccg aactcgacct gcgcatcctg ccggtgcagc
     1501 aggtaggcaa atccaacgag cacacctggg cgcgcggcac cgtcacccac accgcccacg
     1561 cgctcatcga tgcctggttc gagctcggcc agtcggtgag ccgggcaggg atcaggaagc
     1621 tcgtcttcgt caattcgcac ggcggcaacg aggagatcat gggcatcgtc gcccgcgagt
     1681 tgcgggtgcg cgagcagatg ctggtggtca agaccggctg gacccggttc cagccgcccg
     1741 acggcatgct gaccgaggtc gagaagcgcc acggcatcca cgccggcgat ctcgagacct
     1801 cgctgatgct gcatttccgg cccgatctgg tgcggatgga aaacgcccgg gacttccgtt
     1861 ccatcgccgc ccgcgacgag cagcagttca agtatctgcg gccgaccggg acgcacgcct
     1921 attcgtggat cgcctcggat ctcaacccgg ccggtgcggt cggcgacgcc gccagcgcca
     1981 ccgccgagcg cggccggatc tttgccgagg ccgaggtggc tggcatgctc gagctcatcg
     2041 ccgaggtcga gcgcttcccg cttcccggaa cagcggattg attctcccat gtccggaact
     2101 tattggcgag attcgcgttt cgcgcctgtt tgaggcgtag tgtacgggcg cgcgccgggc
     2161 gtggaggggc atgtgacgga cgatgccgga cgggaaaccg cgagcgaggc gcggctgcgg
     2221 ctggcgctgt cgttcggcaa tctggcgatc tgggaactcg acatcgaaaa gaacgaggtg
     2281 acggtctccc ccgagctcaa ccggctctac ggctttcccg aagacgcccg ccccagcgtt
     2341 gcggagtaca tgtcgcgcta cgcccccggg gagatggagc ggagccagcg cctggccgcc
     2401 gaggcggccg cccgcggcga caccaagatc gagctcgagg tcaggcacat ctggccggac
     2461 ggcaccgtca aatggctgct gatccgggcc gaagcggcgc cgccgctgcc ggatggcgga
     2521 ccgcgggccc tcggtgtcgt cgtcgacatc accgccagca agctcgccga ggaagccctg
     2581 cgcaagagcg agcagcgcct gcgcctgtcg caggcggcgg cggggatcgt ctcgttcgag
     2641 ctcgacgttg cgaccggcga gatggtcgcc tcggacaatt tctggccgct gtggggactg
     2701 gccccgcgcg ccacgattca catcgacgat atccagaggc tcgttctacc ggaggccagc
     2761 gatgccgtct ccactgctgg cgaccgcgcc aacggcacca ccacgccgcg gatccagctg
     2821 cagattcgcc gtgccgatga cggacagctg cgctggctga gccgcgatct cgagttccaa
     2881 cgcgacggcg acgggcggcc gctcaagatg tatggcgtcc tgcgcgacat caccgccgcc
     2941 aagcaggccg aagagcgcca ggccctgctc acgcacgagc tgcagcaccg gatcaagaac
     3001 atcctcgcca ccgtcaacgc cattgccagc cagacgatgc ggaccggcga cctcgacacg
     3061 gcgcgcgaaa actttatgtc gcgcctgcgg gcactctccg aggcccataa catcctcacc
     3121 ggcacccgct ggaccgacgc gtcgctgcgc agcgtcttgg aggcggcgct ggcgccgcac
     3181 agcgtgaccg gccgcgtgca gctcgccggc gaggacatgc ggctcacccc gcgcatggcg
     3241 ttgtcgatgg cgctggcggt taatgagctg gcaaccaatg ccaccaaata tggatcgctc
     3301 tcggcccagt cggggcgcgt cgaggtgagc tggcgcgtcg ctgccgatgc agatggtgcc
     3361 gagccagaac tgtcctggac ttggcacgaa agcggcggcc cgcccgtcgt gccgccgcag
     3421 cgcaggggtt tcggatcggt gctgatcgag cgcgtgctcg gcgccgattt tggtggcgtg
     3481 gtgaccatgc aatatgcacc gtccggggtg atagcggagt tgcgggtacc ggtgtcgaat
     3541 ctgccactac cgggtggaaa cgaggcgaac ggggcatgac cgaggccgac gggaagacgg
     3601 tgctggtggt ggaggacgaa gcgctgctgc tgttcaccat cgccgacgac ctccgggcgg
     3661 ccggcttccg ggtcttcgag gcgacgagcg ccccggcagc actgcgactg ctcgatacgc
     3721 tcggcggcat cgacgtgctg ttcaccgatg tcgacatgcc gggcggcatg aacggcctgc
     3781 agctggccca gaaggtgcgc gaccgctggc cggcggcggc ggtgctcatc acttcgggcc
     3841 acgtcaatct cggcgacggg gacctgccgc gcggcggcca attcctcgcc aagccctata
     3901 tccccgcttc ggtgatcagc gccatccaga tcgcggcgga atagcgccgg cctgcgcgat
     3961 cgcgcgcatc ccgccagccg ttgccttcgg ccggacgcgg gggcatatgg cggctgaggc
     4021 cgcccggcgg cggcgatgag gcaggacgca tgcgcatttc gatcttcggc accggatatg
     4081 tcggcctcgt taccggcgcc tgcctcgccg atgtcggcca cgacgtgctg tgcatggacg
     4141 tcgatgtcgc caagatcgcc cggctgggag cgggcgaggt gccgatcttc gagcccggcc
     4201 tgcccgagat cgtccgccgc accatggcgt cgggcagcct gcacttcacc agcagtaccg
     4261 aggcggccgt cgccaacgcc gagctgcagc tgatcgcggt cggcacgccg cccgatgagg
     4321 acggcggcgc cgacctgagc cacgtgctgg cggtcgcatc cagcatcggc cggctgatga
     4381 cgggccacaa ggtggtggtg gtcaagtcga ccgtacccgt cggcacctcc gatgcggtcc
     4441 ggtcgaagct cggcgaggcg ctcggcagcc gcggcgcgca cctcggcttc gacgtcgtcg
     4501 ccaacccgga gttcctcaag gagggcgccg cggtcggcga tttcctcaag cccgaccgca
     4561 tcgtcatcgg tacggcatcg gcacacgcgc gggcggtgat gaccgaactc tacgagccgt
     4621 tcaaccgcaa ccacgaccgc accatctaca tggacctgcg gtcggccgag ctcaccaaat
     4681 acgccgccaa tgcgatgctc gcgaccaaga tcagcttcat caacgagatg gccaatctcg
     4741 ccgaacggct gggcgccgac atcgagcagg tgcgccgcgg catcggtgcc gatccgcgca
     4801 tcggctacga cttcatctac cccggcctcg gttacggcgg cagctgcttc cccaaggacg
     4861 tgcgggcgct gatccacacc gccgccggca tcggctacga cgcgccgctg atcgccgccg
     4921 tcgaggccgt caacgcgcgc cagaagcaga gcctctacgc gcggatggcg gcgcatttcg
     4981 gcagcctgcg cgggctgacg atcgcgctct ggggcctgtc gttcaagccc aataccgacg
     5041 acatgcgcga agcccccagc cgggtgctga tggaggcgct gtggaccgca ggtgcccgcg
     5101 tgcgggcctt cgacccggtg gccatggccg aagcacagcg cctctacggc gaccggccgg
     5161 acctcgtcct cgcacccgac aaatacgctg ccctcgaggg ggcggacggg ctggccatct
     5221 gtaccgaatg gcagcagttc cgcgcccccg atttcgacga gatgggccgc cggctcaagt
     5281 cgcgcaccat cttcgacggc cgcaacatct tcgcgcccga acggctgcgc gaggagggct
     5341 ggacctatct cagcgtcggc cgccccgcgg tgctgccggc gccggtcgcg gtcggaaccg
     5401 cgacgtgaag atcctcgtca ccggcgctgc cggcttcatc ggcttccacg tggcgcgccg
     5461 gctgctggca cgcggcgacg cggtggtggg gctcgacaac gtcaacgcct actacgatcc
     5521 cgcgctgaag caggcccggc tgcgcctgct cgccgacgat cgcggccatt gggagttccg
     5581 gcgcgccgac atcaccgatg ccatagccct cgacgcctgc tttgccgggc accgcttcga
     5641 ccgcgtcatc cacctcgcgg cgcaggccgg agtgcgccac agcatcgaca acccgctcgc
     5701 ctatat
//
LOCUS       DATAZA010000234         2343 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1881727, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000234 DATAZA010000000
VERSION     DATAZA010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2343
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1881727"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..459
                     /locus_tag="VHZ56_05970"
     CDS             <1..459
                     /locus_tag="VHZ56_05970"
                     /inference="COORDINATES: protein motif:HMM:NF017868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase family protein"
                     /protein_id="HEX4297552.1"
                     /translation="GAPMPDLLFVYGTLRDPDLLAAVLARPLNRDAMLVAQAPGYRAV
                     HYPGRPYPALLRTPGVAAEGLVLTDLSRFERDLLDAFEGPEYRRALLPVMVAEELHEA
                     FAYLPAIAIAADAPPWTLAAWQERHKPDVLGTERATADELRRRLIAVRPH"
     gene            724..1329
                     /gene="rplU"
                     /locus_tag="VHZ56_05975"
     CDS             724..1329
                     /gene="rplU"
                     /locus_tag="VHZ56_05975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEX4297553.1"
                     /translation="MDFAVIKTGGKQYKVAANDVLKIEKLDAQPGDVVTFAEVLMVGN
                     GDAVTVGAPLVAGASVAAHFVGTQKQRTVIIQKKHRRQHFDRRNGHRQLLSTVRIGEI
                     LVGGAKTSLTADEKIKARAAAQHSATAAVAEPAAEAPKPARKAPARKATAKAAPKAEA
                     PAAAETAAKPARKAPAKKAAADKPAAKKAPAKKAAPKADKE"
     gene            1342..1611
                     /gene="rpmA"
                     /locus_tag="VHZ56_05980"
     CDS             1342..1611
                     /gene="rpmA"
                     /locus_tag="VHZ56_05980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004676172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEX4297554.1"
                     /translation="MAHKKAGGSSRNGRDTGGRRLGVKKFGGEAVIAGNIIIRQRGTQ
                     WHPGTGVGIGVDHTIYAVIDGTVAFKTRANARAFVSVLPTMKAAE"
     gene            1733..>2343
                     /locus_tag="VHZ56_05985"
     CDS             1733..>2343
                     /locus_tag="VHZ56_05985"
                     /inference="COORDINATES: protein motif:HMM:NF015534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Type 1 glutamine amidotransferase-like
                     domain-containing protein"
                     /protein_id="HEX4297555.1"
                     /translation="MRLYLSSERLGERAGTLLAMIGGARVAVIANGYDGASAMARSLY
                     RAEVCDPMAEFRSLGLHPDEIDLRAHFGDPESLRRRLLPYDLVWVMGGNSFVLRRAMA
                     SSGFDRIVRGRLEADSIAYGGYAAGAVVAGPSLRGLELMDDPFELPDSYDEPLIWSGL
                     GLTPFTIVPHYRSAHPEAAAAEKVVSYMWARKARFRALSDGEV"
BASE COUNT          397 a          838 c          766 g          342 t
ORIGIN      
        1 ggtgccccga tgcccgacct gcttttcgtc tatggcacgc tgcgcgatcc cgacctgctc
       61 gcggcggtcc tggcgcggcc gctgaaccgc gacgcgatgc tggtcgcaca ggctccggga
      121 tatcgcgccg tgcactatcc cggccgcccc tatccagcgc tgctgcggac gccgggagtg
      181 gcggccgaag gcctcgtcct caccgatctc agccgcttcg agcgcgacct gctcgacgcc
      241 ttcgagggtc cggaataccg ccgcgccctc ctgccggtca tggtcgccga ggagctgcac
      301 gaggccttcg cctacctgcc ggccattgcg atcgccgccg atgccccgcc gtggacgctg
      361 gccgcctggc aggagcggca caagccggac gtgctcggca ccgagcgcgc caccgccgat
      421 gagctccgcc gccggctcat cgccgtccgc ccgcactagc ggagctgcgc cgccgtggcg
      481 gccgtccgaa cgccgccggc agctcgtggc agcccgcttc cgccttgact ccgccgggct
      541 ttgcgcggat aaggcccgcc gactgcacgc gccgggaaac tggggcgtgt tttggtttta
      601 tcgaaaccgc agctcgaggc aaagccggat gctcgcatcc ggcgccgaag tccggggcac
      661 atcgcctcgg cgccacaggg cgcgacagat agggatccgg ccgctcaacg cgccggcgcg
      721 acgatggatt tcgcagtgat caagaccggc ggcaagcaat acaaggttgc cgccaatgac
      781 gtgctcaaga tcgaaaagct cgacgcccag cccggcgacg tggtgacctt tgccgaagtg
      841 ctgatggtgg gcaatggcga cgccgtcacc gtcggcgcgc cgctcgttgc cggagcctcg
      901 gtggcggcgc acttcgtcgg cacccagaag cagcgcaccg tcatcatcca gaaaaagcac
      961 cggcgccagc acttcgatcg ccgcaatggc catcgccagc tgctgtccac cgtgcgcatc
     1021 ggcgaaatcc tggtcggcgg cgccaagacc tcgctgaccg ccgacgagaa gatcaaggcg
     1081 cgcgccgcgg cgcagcattc ggcgaccgcc gcggtcgcag agccggctgc cgaagcgccc
     1141 aagccggccc gcaaggcgcc ggcgcggaag gccaccgcca aggctgcacc caaggcggaa
     1201 gcgccggcgg ctgccgagac ggccgccaag cctgccagga aggcgccggc aaagaaggcc
     1261 gctgccgaca agcctgccgc caagaaggcg ccggccaaga aagccgcccc caaggcggac
     1321 aaggaataag gagaccctga gatggcacac aagaaagcag gcggctcgtc ccgcaatggc
     1381 cgcgataccg gtggccgtcg tctcggcgtc aagaagttcg gcggcgaagc tgtgatcgcc
     1441 ggcaacatca tcattcgcca gcgtggcacc caatggcatc cgggcacggg tgtgggcatc
     1501 ggcgtcgatc acaccatcta cgccgtgatc gacggcaccg tcgccttcaa gacccgagcc
     1561 aatgcccgcg ccttcgtgtc ggtactcccg accatgaaag cggccgaata acccggtagg
     1621 atcaaaaatc cctgccggag accagctccc cggcaaggca gatcaccgcc aagcaagatc
     1681 gaaaggggag ccgggtttcc ggttcccctt ttcgcttttg aggcagtgga ccatgcgact
     1741 gtatctttcg tcggaacggc tgggcgagcg ggcgggaacg ctcctcgcaa tgatcggcgg
     1801 cgcccgcgtc gcggtgatcg ccaatgggta cgatggcgct tccgccatgg cgcgcagcct
     1861 ctatcgcgcc gaggtctgcg acccgatggc cgagttccga agtctcgggc tgcatcccga
     1921 tgagatcgac ctgcgggcgc atttcggcga tcccgaaagc ctgcgccggc gcctgctccc
     1981 ctacgacctt gtctgggtca tgggcggcaa cagcttcgtg ctccgccgcg ccatggccag
     2041 ctcggggttc gaccgcatcg tccgcggccg gctcgaggcc gacagcatcg cctatggcgg
     2101 ttacgccgcc ggcgccgttg tcgccggtcc gagcctgcgc ggcctcgagc tcatggacga
     2161 tccgttcgag ctgcccgaca gctacgacga accgctgatc tggagcggtc tgggactcac
     2221 tccctttacc atcgtgccgc attaccgctc cgcccacccc gaagccgccg cggccgagaa
     2281 agtggtgtcc tatatgtggg ccaggaaggc ccggttccgg gccctctcgg atggcgaagt
     2341 cat
//
LOCUS       DATAZA010000235         1959 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_374839, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000235 DATAZA010000000
VERSION     DATAZA010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1959
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_374839"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..934
                     /locus_tag="VHZ56_05990"
     CDS             59..934
                     /locus_tag="VHZ56_05990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012760408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEX4297556.1"
                     /translation="MSIKLGRYDVAYHGDPEAYVRTYVEGGYKAIYMPPLSPADGVEI
                     KALAKAVADHHLVIGEAGAWKNLIAFDEPTRAANLRYACEVLAVADELGVVACVAFHG
                     TVGHAADPWQLSDNYDYGPHPGNRGEAGFQRAVETARYVIDTVKPRRTRFSLEMVPWL
                     VTGTPEGYLRLIEAIDRPQFGAHIDAANMIVSPSLYFDTPGMLRHGFELLGRYVVSAH
                     AKDIVMKGGPGRISFHMDEVVPGDGMLDYRAYLRELAALGRDIPLMLEHFTEIEYGRG
                     RDHIRAIGTALGIPT"
     gene            complement(931..1755)
                     /locus_tag="VHZ56_05995"
     CDS             complement(931..1755)
                     /locus_tag="VHZ56_05995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEX4297557.1"
                     /translation="MTTLLIADGAATAHALTAALQLGGEIHILDPGASLAEPLADAIV
                     ALAPGYAAIVAPATSTGRNLLPRVAALLDVAPVSDVIEVVAPDIFRRPTYAGNAIETV
                     QATDPIKLLTVRPSAFAATALDGIRRIELPALADRGVARLVSESTDANDRPELGSARI
                     VVSGGRAFGSKEKFDELLIPLAARLNAAIGASRAAVDAGYAANDLQVGQTGKIVAPDL
                     YIACGISGAIQHLAGMRSSKVIVAINSDPAAPIFAVADYGLVGDIFTLLPELTAAL"
     gene            complement(1752..>1959)
                     /locus_tag="VHZ56_06000"
     CDS             complement(1752..>1959)
                     /locus_tag="VHZ56_06000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013761780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEX4297558.1"
                     /translation="TPRFASLPNIIKARAKPLQKTTAAELGVDLAPRLRVLKVEEPPA
                     RKPGIVVGSVTELLGHLRDAEVLP"
BASE COUNT          308 a          632 c          706 g          313 t
ORIGIN      
        1 gttccggggt tgacagttca cggcgcgggc tccctctttc cgggagcagg aggaaagcat
       61 gtcgatcaag ctcgggcgct acgacgttgc ctatcacggc gacccggagg cctatgtccg
      121 gacctatgtc gaaggcggct ataaggccat ctatatgccg ccgctgtcgc cggcggatgg
      181 cgtcgagatc aaggcgctgg cgaaggccgt ggcggatcat cacctcgtca tcggcgaggc
      241 cggggcctgg aagaacctca tcgcgttcga cgagccgacg cgcgcggcga acctgcgcta
      301 tgcctgcgag gtcctggcgg tcgccgatga gctcggcgtg gttgcctgcg tcgccttcca
      361 cggcacggtc ggccatgcgg ccgatccgtg gcagctcagc gacaactacg actacggtcc
      421 gcatcccggc aatcgcggcg aggccggatt ccagcgtgcg gtcgagacgg cgcggtacgt
      481 catcgacacg gtgaagccga ggcgcaccag gttttcgctc gagatggtgc cgtggctggt
      541 gacgggaacg ccggagggct acctcaggct gatcgaggcg atcgaccggc cgcagttcgg
      601 ggcccatatc gacgccgcca acatgatcgt ctcgcccagt ctctatttcg atacgccggg
      661 catgctgcgg cacggcttcg agctgcttgg gcgatatgtc gtctcggccc acgccaagga
      721 tatcgtgatg aagggcggac cggggcgaat ctcgttccac atggacgagg tggtgcccgg
      781 cgacggcatg ctcgactatc gcgcctatct gcgcgagctg gcggcgctcg gccgtgacat
      841 tccgctgatg ctcgagcatt tcaccgagat cgaatacggc cgcggccgcg accacatccg
      901 cgccatcggc acggcgctcg gtattccgac ctagagcgcg gcggtcaact ccggcagcag
      961 cgtgaagatg tcgccgacga ggccgtagtc ggcaacggcg aagatcggcg cggcgggatc
     1021 ggaattgatg gcgacgatca ccttgctgct ccgcatcccc gccaggtgct ggatggcgcc
     1081 ggagatgccg caggcgatgt agaggtcggg cgcgacgatc ttgccggtct ggccgacctg
     1141 caggtcattg gcggcataac cggcgtcgac cgcggcgcgg ctggcgccga tcgcggcatt
     1201 gagcctggcc gcgaggggga tcagcaactc gtcgaatttc tccttgctgc cgaaggcgcg
     1261 gccacccgag acgacgatcc gggccgagcc cagttcgggg cgatcgtttg cgtcggtgga
     1321 ctcggagacg aggcgcgcga ccccgcggtc ggccagtgcc ggcagctcga tccggcgaat
     1381 gccgtcgagc gctgttgccg cgaacgccga cggccgcacg gtcaacagct ttatcgggtc
     1441 tgtcgcctgc accgtctcga tggcgttgcc ggcataggtc ggtcgcctga aaatgtccgg
     1501 cgcgaccacc tcgatcacgt cggagaccgg cgcgacatcg aggagggccg ctacccgcgg
     1561 cagcaggttc ctgccggtcg acgtcgctgg cgccacgatg gcagcgtagc cgggcgcgag
     1621 cgccacgatc gcgtcggcca gcggctcggc cagcgaggcg cccgggtcga ggatgtggat
     1681 ttcgccaccc agttgcagtg cggcggtgag ggcatgggcg gtcgcggcac catcggcgat
     1741 cagcagcgtc gtcacggcag cacctcggca tcacggaggt ggccgagcag ctcggtcacc
     1801 gagccgacga cgatcccggg cttgcgggcc ggcggctcct cgaccttcag cacccggagc
     1861 cgcggcgcga gatcgacgcc gagctcggcg gcggtggtct tctgcagcgg cttggcgcgc
     1921 gccttgatga tgttgggcag cgaggcaaag cgcggcgtg
//
LOCUS       DATAZA010000236         6925 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2231193, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000236 DATAZA010000000
VERSION     DATAZA010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6925
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2231193"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..101)
                     /locus_tag="VHZ56_06005"
     CDS             complement(<1..101)
                     /locus_tag="VHZ56_06005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010972209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HEX4297559.1"
                     /translation="MSALVAIVGRPNVGKSTLFNRLVGRKIALVDDTP"
     gene            complement(121..1008)
                     /locus_tag="VHZ56_06010"
     CDS             complement(121..1008)
                     /locus_tag="VHZ56_06010"
                     /inference="COORDINATES: protein motif:HMM:NF021492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4297560.1"
                     /translation="MSSDTIVREVDEELRRDRLRKLWRHGGPYVIGAAVLVVLAVAAY
                     EGWTWWQKTQASKSSDQFYAAIAAVNGTDKAAGKKALDDVIAQGSGGYPMLAQFREAA
                     LLAQTGKTDDAVAAYDALASAQTNPHLRELALVLGANLLIEKGDVAGVQQRVSGLLTP
                     DSPMRNAAREALGLAQFKAGKLDDAMTTFQSIMDDPLAARDAQSRIQLYMQELEAQGA
                     KAPVPANPSAPADASSAAAPVASDVSSVSAAASTVSSVAPAVSSAVSVASSAAPVASA
                     SSEAAPSAVSSEAVPSSAP"
     gene            1222..1950
                     /locus_tag="VHZ56_06015"
     CDS             1222..1950
                     /locus_tag="VHZ56_06015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020009647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX4297561.1"
                     /translation="MRRRHFLAAACSCVLCAGAARPSDLIEPHMHFVPSGAAPEVCMT
                     LDACMGATDHRILDTLIGNAIPATIFATRRWLDHNPDVVKTLLAHKDLFAVENHGAMH
                     IPAIIGTETAYGIAPAGTADAVFAEVEGGQQAVTAALGIAPRWYRDATALYTQDAINL
                     IGTMSLRIAGFSLNGDLGASVPAAIAQKRIAAARSGDVIISHINQPTRSSGQGVADGL
                     LELKASGFRFLHLDDVTMRSGLLV"
     gene            complement(1933..2172)
                     /locus_tag="VHZ56_06020"
     CDS             complement(1933..2172)
                     /locus_tag="VHZ56_06020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297562.1"
                     /translation="MSSRRDTLAATERRIRRRLGRHNLDLLKAQKPGPKVLAHGGYKL
                     RDAASGTILLGEMSYEFSASLEEVEAWLDRLDQQA"
     gene            2290..3567
                     /locus_tag="VHZ56_06025"
     CDS             2290..3567
                     /locus_tag="VHZ56_06025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010973285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEX4297563.1"
                     /translation="MLLEIAIIVVLVLCNGLLSMSELAVVSSRPARLKVMAAEGNKGA
                     AVALRLADDPGKFLSSAQVGISLIGVLSGAFSGATLGERFSEFLAGRGLAEPAASTIG
                     VGVVVVVITYITLILGELVPKQLALRDAEGVAARAAPAMAFLASVAAPLVWLLDVSSR
                     AVMTAIGQAGRTEDRVTDEEVKTIIAEAESQGVLETEETEMISGVMRFADRSARGLMT
                     PRLEVEIVDLADPEPAVLERLRISHHSMLPVHEGEPDKIIGVVVRKDLIDVFADGRLP
                     DIRALVKPAPVVLDRADALSVLRAIRSSVVHMALVFDEYGHFEGIVTPGDILGAITGA
                     FHQEEGDDTAFVQREDGSWLVSGSMPVDEFAAKIGVPIPRDPGYETVAGYVLAELNHL
                     PVAGETFVREPWRFEVLDLDGRRIDKILVGRTA"
     gene            complement(3580..4305)
                     /locus_tag="VHZ56_06030"
     CDS             complement(3580..4305)
                     /locus_tag="VHZ56_06030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX4297564.1"
                     /translation="MSDLDGKIVLVTGASRGIGYQAALEAARRGAHVVAVARTVGGLE
                     DLDDAIKTAGGSATLVPLDLRDGDGIDRLGQSIFERWGRLDGLVGNAGVLGVLTPLAH
                     LEPKEFEQTFAVNVTANYRLIRSLDLPLRQAPAGRAVFLTSGAARGPAAYWGLYAATK
                     AALETLVRSYAAELEITTAKVNIFNPGRLRTAMHAKAFPGIDPAEIEPPAVVAPALID
                     MLEPAYDKSGQYVDYPKKQTRPI"
     gene            complement(4310..5803)
                     /gene="purF"
                     /locus_tag="VHZ56_06035"
     CDS             complement(4310..5803)
                     /gene="purF"
                     /locus_tag="VHZ56_06035"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011424763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEX4297565.1"
                     /translation="MTGPAANDPLDIYGDTLREECGVFGILGHPEAATLTALGLHALQ
                     HRGQEAAGIVSFDGRQFHSERQLGLVGDHFTDPATVRRLPGHMAMGHVRYSTTGETIL
                     RNVQPLFAELEEGGIAIGHNGNFTNGLTLRRELIAGGAICQSTSDTEVVLHLIARSRR
                     KGSGERFVDALSQLEGAYSMVAMTRTKLIGARDPNGIRPLVLGDLDGHPIFASETCAL
                     DIIGARFVRDVENGEVVIAEIQPDGRTTIESLKPFAPRPERLCLFEYVYFARPDSMVG
                     GRSVYAARKRMGINLAQEAPVEADVVVPVPDGGTPAAIGFAQASGIPFELGIIRNHYV
                     GRTFIEPTQSIRAFGVKLKHSANRAEIDGKRVVLVDDSIVRGTTSVKIVQMMREAGAR
                     EVHLRVASPMIFFPDYYGIDTPDRDNLLANQFDNVAAMARFVGADSLQFLSIDGLYQA
                     VGGKKRDPRAPQFTDHYFTGDYPTTLTDLTGRGKSDPKRLSLMREAS"
     gene            complement(5800..6447)
                     /locus_tag="VHZ56_06040"
     CDS             complement(5800..6447)
                     /locus_tag="VHZ56_06040"
                     /inference="COORDINATES: protein motif:HMM:NF014704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEX4297566.1"
                     /translation="MVFTGVDVGVAVLILISAVLATARGFTREILSLATWAGSAAVAA
                     YMYFYHRDIAAAYIKEELVATGVTVIGSFLVALIVLHLLTMWIGDMVVDSRVGPLDRT
                     LGFVFGAARGVLICIVAAVFANFLLGPDPSKLPPMLKDAKSFPPLMSAGDWLITLLPP
                     DVEKQFTDFLQKRNQNPETPGPNDATPPDNGDNGDNTDTSASSAPADAASSAPGA"
     gene            complement(6556..>6925)
                     /locus_tag="VHZ56_06045"
     CDS             complement(6556..>6925)
                     /locus_tag="VHZ56_06045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008874967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="magnesium chelatase domain-containing protein"
                     /protein_id="HEX4297567.1"
                     /translation="LETRCGVRIGANDIYLNVAGGLKVNEPAADLAVAAALISSLSNS
                     PLPPEAVYFGEISLAGGVRPVVHAALRLREAQKLGFKSAVTGKLGAGDGASGLAVAEY
                     SELADLIGRIAANGRRGPAD"
BASE COUNT         1048 a         2459 c         2331 g         1087 t
ORIGIN      
        1 ggcgtgtcgt cgaccagcgc gatcttgcgg ccgaccagcc ggttgaacag cgtcgatttg
       61 ccgacattgg ggcggccgac gatggcgacg agggcgctca tgctggggtt cggcgccggc
      121 tcagggcgcc gacgacggca cagcctcgga cgataccgcc gacggcgcag cctccgacga
      181 ggccgacgca accggcgccg ccgacgaggc gaccgacacc gccgacgaga ccgcaggcgc
      241 tacggacgag accgttgaag ccgcagcgga cacgctgctc acatcgctcg cgaccggcgc
      301 cgcggccgac gacgcatcgg cgggcgccga cgggttggcg ggcaccgggg ccttggcgcc
      361 ctgcgcctcg agttcctgca tgtagagctg gatgcggctt tgcgcgtcgc gggcggccag
      421 cggatcgtcc atgatcgact ggaacgtcgt catggcgtcg tcgagcttgc cggccttgaa
      481 ctgggccagc cccagcgcct cgcgcgccgc gttgcgcatc ggcgagtccg gggtgagcag
      541 gccgctcacc cgctgctgca cgccggcgac gtcgcccttc tcgatcaaca ggttcgcgcc
      601 cagcaccagc gccagctcgc gcagatgcgg attggtctgt gcgctcgcca gcgcatcata
      661 ggcggccacg gcgtcgtcgg tcttgccggt ctgcgccagg agagccgcct cgcggaactg
      721 cgccagcatc ggatagccgc ccgagccctg ggcgatgaca tcgtcgagcg ccttcttgcc
      781 ggccgccttg tcggtgccgt tgacggccgc gatggcggcg tagaactggt ccgacgattt
      841 tgacgcctgg gttttctgcc accaggtcca gccctcgtag gcggcgaccg cgagcaccac
      901 cagcaccgcc gcgccgatga cgtacggtcc gccgtgccgc cagagcttgc gcagccgatc
      961 gcgccgcagt tcctcgtcga cctcgcggac aatcgtatcg ctggacatga aacccttgcc
     1021 gtcccgggaa aatcggccgc accatagtgg cgacccccgg tgaatgcaaa tgccgccgat
     1081 gccggccgaa acccggccaa atcctgccgt gcggacggag tccgctcgcg gccgcggcta
     1141 ccccgtcgat caccttgcgg cgatgccgca tggcgggtgt tgggccggcg gcgtatgagc
     1201 atcgccgacc ggagtcgccc gatgcgccgt cgccacttcc tcgctgccgc ctgctcctgc
     1261 gtgctctgcg ccggcgccgc ccgccccagc gatctcatcg agccgcacat gcatttcgtc
     1321 ccgtcggggg cggcgcccga ggtttgcatg acgctcgacg cctgcatggg cgcgaccgac
     1381 caccgcatcc tcgacacgct gatcggcaac gccatcccgg cgacgatctt cgccacccgc
     1441 cgctggctgg accacaaccc ggacgtcgtg aaaacgctgc tggcgcacaa ggacctgttc
     1501 gccgtcgaga atcacggcgc gatgcacatc ccggccatca tcggcaccga gacggcctat
     1561 ggcatcgccc ctgccggcac cgccgacgcg gtattcgccg aggtcgaggg cggccagcag
     1621 gcggtgaccg cggcgctcgg catcgccccc agatggtacc gcgacgccac cgcgctctac
     1681 acccaggacg ccatcaacct catcggcacc atgagcctca ggatcgccgg cttttcgctg
     1741 aatggcgacc tcggcgcgag cgtcccggcc gccatcgcgc agaagcgcat cgccgcggcc
     1801 aggagcggcg acgtcatcat ctcgcacatc aaccagccga cgcgctcgtc ggggcagggg
     1861 gtcgccgacg gcctgctcga gctcaaggca agcggtttcc gcttcctgca cctcgatgac
     1921 gtgacgatgc gctcaggcct gctggtctag ccggtcgagc caggcctcga cctcttcgag
     1981 gctggccgag aattcgtacg acatctctcc caaaaggatc gtgccgctcg ccgcgtcgcg
     2041 cagcttgtag ccgccatgcg ccagcacctt cggcccgggc ttctgcgcct tgagcaggtc
     2101 gagattgtgc cgtcccagcc gccggcggat gcggcgttcg gtggcggcga gggtgtcgcg
     2161 gcgcgagctc atcggccggc tttacccaaa cccctgcggt cgacgcaagt cggctgtgta
     2221 ccgccgccgt tggggaattg ccggcgcttt gctataagcg cccctcccgc aaccgcctcc
     2281 ggctccgatt tgctgctcga aatcgccatc atcgtcgtcc tcgtcctctg caacggcctg
     2341 ctgtcgatgt cggaactggc ggtggtctcg tcgcgcccgg cgcggctcaa ggtcatggcc
     2401 gccgagggca acaagggcgc ggcagtggcc ctgcggctgg ccgacgatcc cggcaaattc
     2461 ctgagttcgg cgcaggtcgg catcagcctc atcggcgtgc tgtcgggcgc cttctccggc
     2521 gccaccctcg gcgagcggtt ctccgagttc ctcgccggcc gcggcctcgc cgagcctgcc
     2581 gccagcacca tcggcgtcgg cgtcgtggtg gtggtcatca cctacatcac gctgatcctc
     2641 ggcgagctcg tgcccaagca gctggcgctg cgcgatgccg agggcgtcgc cgcccgcgcg
     2701 gcccccgcca tggcattcct tgcgtccgtc gcggcgccgc tcgtctggct gctcgacgtc
     2761 tcgagccgcg ccgtgatgac ggcgatcggc caggccggcc ggaccgagga tcgcgtcacc
     2821 gacgaggagg tcaagaccat catcgccgag gccgagagcc agggcgtgct cgagacggag
     2881 gagaccgaga tgatctccgg cgtcatgcgc ttcgccgacc gctccgcccg cgggctgatg
     2941 acgccgcgcc tcgaggtcga gatcgtcgat ctcgccgatc cggagcccgc cgtgctcgag
     3001 cgcttgcgga tctcgcacca ctccatgctg cccgtgcacg agggcgagcc ggacaagatc
     3061 atcggcgtcg tcgtgcgcaa ggacctgatc gatgtcttcg ccgacggccg cctgcccgac
     3121 atccgggcgc tggtgaagcc cgccccggtc gtgctcgatc gcgccgacgc gctctccgtg
     3181 ctgcgcgcca tccgctcttc cgtcgtccac atggcgttgg tgttcgacga atacggacac
     3241 ttcgagggca tcgtgacgcc cggcgacatc cttggtgcca tcaccggcgc cttccaccag
     3301 gaggagggcg acgacactgc cttcgtgcag cgcgaggacg gctcgtggct ggtctctggg
     3361 tcgatgccgg tcgacgaatt cgccgccaag atcggcgttc cgatccccag ggacccgggc
     3421 tacgaaaccg tcgcgggcta cgtgctggcg gagctcaacc acctgccagt cgccggcgag
     3481 accttcgtgc gcgagccctg gcgcttcgag gttctcgacc tcgacggccg ccgcatcgac
     3541 aaaatactgg tcggccgcac ggcctgaccg gaagacgccc tagatcggtc gcgtctgctt
     3601 tttcgggtaa tcgacgtact gcccgctttt gtcataggcc ggctcgagca tgtcgatgag
     3661 tgcgggtgca acgacggcgg gcggctcgat ctcggcggga tcgatgccgg gaaacgcctt
     3721 ggcatgcatt gcggtgcgga gccgcccggg attgaagatg ttcaccttgg ccgtggtgat
     3781 ctcgagctcg gcggcgtagc tgcggaccag cgtctcgagc gccgccttgg tggccgcgta
     3841 gagtccccag tacgccgctg ggccgcgcgc cgcgcccgaa gtcaggaaca cggcgcggcc
     3901 ggcgggcgcc tgtcgcagcg gcaggtcgag cgagcgaatc agccggtagt tggccgtgac
     3961 gttgaccgcg aaggtctgct cgaattcctt gggctcgaga tgcgccagcg gggtgaggac
     4021 cccgagcaca ccggcgttgc ccaccagccc gtcgagtcgg ccccagcgct cgaagatcga
     4081 ctgccccagc cggtcgatgc cgtcgccgtc gcgcaggtcg agcggcacca gcgtggccga
     4141 tcctccggcg gtcttgatgg cgtcgtcgag atcctcgagc ccccccaccg tgcgcgccac
     4201 tgcgaccacg tgggcgccgc gccgcgccgc ctcgagcgcc gcctggtagc cgatgccgcg
     4261 gctcgccccg gtgacgagga cgatcttgcc gtcgagatcg gacatcgggc tagctcgcct
     4321 cgcgcatcag cgacagccgc ttcgggtcgg acttgccgcg cccggtcagg tcggtgagcg
     4381 tcgtcggata atcgccggtg aagtagtggt cggtgaactg cggcgccctg gggtctcgct
     4441 tcttgccgcc gacggcctgg tagagcccgt cgatcgacag gaactgcagc gaatccgcgc
     4501 cgacgaagcg ggccatcgcc gcgacgttgt cgaactggtt ggcgaggagg ttgtcgcggt
     4561 cgggcgtgtc gatgccgtaa tagtccggaa aaaagatcat cggcgaagcg acgcgcaggt
     4621 gcacctcgcg cgccccggcc tcgcgcatca tctgcacgat cttgaccgag gtggtaccgc
     4681 gcacgatcga atcgtcgacc agcaccacgc gcttgccgtc gatctcggcg cggttggccg
     4741 aatgcttgag cttgacgcca aaggcgcgga tcgactgcgt cggctcgatg aaggtgcgcc
     4801 cgacatagtg gttgcggatg atgccgagct cgaacggtat tccactcgcc tgtgcaaagc
     4861 cgatcgccgc cggcgtgccg ccatcgggca ccggtaccac cacgtcggcc tcgacgggcg
     4921 cctcctgcgc caggttgatg cccatgcgct tgcgcgcggc atacaccgag cgcccgccca
     4981 ccatcgagtc cggccgcgcg aaatacacgt attcgaacag gcacagccgc tccggccgcg
     5041 gcgcgaacgg cttcagcgac tcgatcgtcg tccgcccgtc cggctggatt tcggcgatca
     5101 ccacctcgcc attctcgacg tcgcgcacga agcgggcacc gatgatgtcg agcgcgcagg
     5161 tctccgaggc aaagatcgga tggccgtcga ggtcgcccag caccagcggc cggatgccgt
     5221 tgggatcgcg cgccccgatc agcttggtgc gcgtcatggc caccatcgag taggcgccct
     5281 cgagctggct cagcgcatcg acgaagcgtt cgcccgagcc cttgcggcgt gaacgcgcga
     5341 tgagatgcag caccacctcg gtgtcggagg tcgactggca gatggcgccg ccggcgatca
     5401 gctcgcgccg cagcgtcagc ccgttggtga agttgccgtt gtggccgatc gcgatgccgc
     5461 cctcttcgag ctcggcaaac agcggctgca cgttgcggag gatggtctcg ccggtcgtcg
     5521 aataccgcac atgccccatc gccatgtggc cgggcaggcg cctgaccgtc gccgggtcgg
     5581 tgaaatggtc gcccaccagg ccgagctggc gctcggaatg gaactgtcgc ccatcgaacg
     5641 agacgatgcc cgctgcctcc tggccgcgat gctgcagcgc gtggagaccc agcgccgtca
     5701 gcgtcgccgc ttcggggtgg cccaggatgc cgaacacgcc gcactcctcg cgcagcgtgt
     5761 cgccgtagat gtcgagcgga tcgttggcgg caggtccggt catgcgcccg gcgcgctcga
     5821 ggcggcgtcc gccggtgccg acgacgcgct ggtgtcggta ttgtcgccat tatccccgtt
     5881 gtcgggcggc gtggcgtcgt tcgggcccgg cgtctcgggg ttctggttcc gcttctgcag
     5941 gaagtcggtg aactgctttt ccacgtcggg cggcagcagc gtgatcagcc agtcccccgc
     6001 gctcatcagc ggcgggaagc tcttggcatc cttgagcatc ggcggcagct tggagggatc
     6061 ggggccgagc aggaaattgg cgaacaccgc cgccacgatg cagatcagca ccccgcgcgc
     6121 cgcgccgaac acgaagccga gcgtgcggtc gagcggaccg acacgggaat cgaccaccat
     6181 gtcgccgatc cacatcgtca gcaggtgcag cacgatcagc gccacgagga agctgccgat
     6241 caccgtgacg ccggtcgcca ccagctcttc cttgatgtag gccgcggcga tgtcgcgatg
     6301 gtagaaatac atgtacgcgg cgacggcggc cgagccggcc caggtggcca gcgacaggat
     6361 ctcccgggtg aacccccgcg ccgtggcgag aaccgccgaa atcagaatca ggacggcgac
     6421 gccaacgtcg acaccagtga aaaccatgct cgatacgatc caaagccgct gtgaggctcc
     6481 gtttatccgc taaaccgccg cgtgccaagc ggcgccgggc cgcacacggg cgatgtgcac
     6541 ggaaagcatg gacgctcagt cggccggtcc gcgccgcccg ttcgccgcga tccgcccgat
     6601 gaggtcggcc agttcgctgt attcggcgac cgccagcccg gaggcgccgt ccccggcccc
     6661 gagcttgcca gtcaccgccg acttgaagcc gagcttctgc gcctcgcgca gccggagtgc
     6721 ggcgtgcacc accggccgga cgccgccggc cagcgagatt tcgccgaaat acaccgcctc
     6781 gggtggcagc ggcgaattgc tgagcgacga aatcagcgcc gccgccacgg cgaggtcggc
     6841 cgccggttcg ttgaccttca gcccgccggc gacattgagg tagatgtcgt tggccccgat
     6901 ccgcaccccg cagcgggtct ccagc
//
LOCUS       DATAZA010000237         1928 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3508403, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000237 DATAZA010000000
VERSION     DATAZA010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1928
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3508403"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..852)
                     /locus_tag="VHZ56_06050"
     CDS             complement(<1..852)
                     /locus_tag="VHZ56_06050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297568.1"
                     /translation="MSTSGPEALRALDEAVRDIRREEDEIARRLARSAELLTRLREQE
                     GELLRQLVSARLDAAAQEQLARQASEAGARARQMLKAHGETLAAIDGQLTALDAAIAA
                     AVTERAALQGEAARLDGELTALAGAVRPQIEADPTYAAKVETARQLAGVADEARQRAD
                     AGAAACDGEARAYRGDPLFSYLWARGYGTETYRANRFTAWLDSKIATRVDFDEKRPLF
                     AVLNDIPSRLRDLAVRQQSEAEAAGAAVRAFEADALAAAGGTPARDGRAATVAGIGEI
                     DGRVVILE"
     gene            complement(854..1711)
                     /locus_tag="VHZ56_06055"
     CDS             complement(854..1711)
                     /locus_tag="VHZ56_06055"
                     /inference="COORDINATES: protein motif:HMM:NF039746.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6384 family protein"
                     /protein_id="HEX4297569.1"
                     /translation="MGAIEETAAPSTDTPGEVPRRDAQPAAVAVDLSPDIDLDDAVAA
                     LQAGQYRYTPPRSGPALTLARFYVARRSWLPPVTAVLVLAVLAVGGYFLAYVPFHNQQ
                     AELARVELHQTMPAQMDALYETIFDETKVQQAATDAASLRDRGKAAAGRGDRAAAVDA
                     IADLKSLRDTLRQEYRLMVVDQPGVDPTFWTFPPNNNEATNYYIVVEAVDATGQVISL
                     PVLSEDTGRVDTVNRWGLRVTEDVYRSVAADKRDDGSVENAVVAIKQFGFIDPDYLVD
                     VLGGAVTHW"
BASE COUNT          267 a          706 c          645 g          310 t
ORIGIN      
        1 ctcgaggata acgacgcggc catcgatctc gccgatgccg gcgaccgttg ccgcccgccc
       61 atcgcgcgcc ggcgtgccgc ccgccgcagc gagcgcatcg gcctcgaagg cgcgcaccgc
      121 cgcgccggcg gcctcggcct cactttgctg ccgcacggcc aaatcccgca gccgcgatgg
      181 aatatcgttc aacaccgcaa acagcggccg tttctcgtca aagtccaccc gcgtggcgat
      241 cttgctgtcg agccacgcag tgaagcggtt ggcccggtac gtttcggtgc cgtaaccgcg
      301 cgcccacaaa tagctgaaca gcggatcgcc ccgatacgcc cgcgcttcgc cgtcgcacgc
      361 cgccgcaccg gcgtccgccc gctgccgggc ttcgtcggca accccggcaa gctggcgagc
      421 cgtctccact tttgccgcgt aggtgggatc ggcctcgatc tgcggccgca ccgcgccggc
      481 gagcgccgtc agctcgccgt ccagccgcgc cgcttcacct tgcaacgccg cgcgctcggt
      541 gaccgccgca gcgattgccg catcgagcgc cgtcagctgg ccgtcgatcg ccgccagcgt
      601 ttcgccatgc gccttgagca tctggcgcgc tcgtgcgccg gcctcgctcg cctgccgggc
      661 aagctgctcc tgcgccgccg cgtcgagccg ggcgctgacc agctggcgca gcaattcgcc
      721 ctcctgctcg cgcagccggg tgagcagctc ggcgctgcgc gccagccggc gggcgatctc
      781 atcctcctcg cggcggatgt cgcgcacggc ttcgtcgagc gccctcagcg cttcgggtcc
      841 gctggtgctc atttcaccaa tgcgtcaccg ccccgccgag cacgtcgacc agatagtctg
      901 ggtcgatgaa gccgaactgc ttgatcgcca ccacggcgtt ctcgacgctg ccgtcgtcgc
      961 gcttgtccgc cgcgaccgag cggtacacgt cctcggtgac gcgcaggccc cagcgattga
     1021 cggtgtccac ccggccggtg tcctcactga gcaccggcag gctgattacc tggccggtcg
     1081 catcgaccgc ctcgaccacg atgtagtagt tggtcgcctc gttgttgttg ggcggaaatg
     1141 tccagaatgt cggatcgacc cccggctggt cgacgaccat cagccggtac tcctgccgca
     1201 gcgtgtcgcg gagcgatttg aggtcggcga tggcgtccac cgccgcggcg cggtcgccgc
     1261 gtccggccgc cgccttgccg cgatcgcgca gcgaggcggc gtcggtggcc gcctgctgca
     1321 ccttggtctc gtcgaagatc gtctcgtaga gcgcgtccat ctgcgccggc atggtctggt
     1381 gcagttcgac gcgggccagc tccgcctgct ggttgtgaaa cggcacatag gccaggaaat
     1441 agccgccgac cgccagcacg gcgagcacca gcaccgcggt gaccggcggc agccagctgc
     1501 ggcgcgccac gtagaaccgg gcaagggtca gcgccggccc ggagcgtggt ggcgtgtagc
     1561 gatactgccc cgcctggagc gctgcgaccg catcgtcgag atcgatatcg ggcgacagat
     1621 ccacggcgac cgcggcaggc tgcgcatccc gcctcggcac ctcgcccgga gtgtccgtgg
     1681 acggggcggc tgtctcctcg atggcgccca tgcgcttttc cgattgcctg gctgcttgat
     1741 cggtcgcagc gtgtggccca atttatggcg cccggccggc ggcacaacga acccggcagg
     1801 ggaccggccc gcattttgcg cgcatggttg cgaaaaagac gcaggaaaag ggcagcggcg
     1861 atggattttg ggggccgcta cctgttcggc gcggatcgtg cggcggtgtg ggcggcactc
     1921 aacgacac
//
LOCUS       DATAZA010000238        10391 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_374966, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000238 DATAZA010000000
VERSION     DATAZA010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 10391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10391
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_374966"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..314)
                     /gene="tbpA"
                     /locus_tag="VHZ56_06060"
     CDS             complement(<1..314)
                     /gene="tbpA"
                     /locus_tag="VHZ56_06060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131583.1"
                     /note="part of the thiamine and TPP transport system
                     tbpA-thiPQ; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX4297570.1"
                     /translation="MLRIVFALAVALGLLAAPALAQDKPTLTIYTYDAFAADYGPGPG
                     LKAGFEKICNCTVDFVATDSSIGALRRVQLEGSSTKADIVLGLDTSLSGEARATGLFA
                     PHG"
     regulatory      complement(382..476)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            503..1201
                     /locus_tag="VHZ56_06065"
     CDS             503..1201
                     /locus_tag="VHZ56_06065"
                     /EC_number="2.7.6.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004788 - thiamine diphosphokinase
                     activity [Evidence IEA];
                     GO_process: GO:0006772 - thiamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine diphosphokinase"
                     /protein_id="HEX4297571.1"
                     /translation="MQERTASSPLITYETLLVIVGGGTVDPDLLRDLYASGGHLVAAD
                     GGADQIAAAGLMPEAIIGDFDSLQNPDIWLGRTRMIRIAEQETTDFEKALYCTEAPVT
                     VAVGMTGGRFDHTLAALDAVARYARERIIILVDAFDVAMALTGPFEFEVAEGDRVSVH
                     PLAPIKFRRSFGLRYPLDGLRLAPGERTGTSNAAIDGVFSIEPEPRSKAPWLLIVDRK
                     YLFGIAAAASAGRP"
     gene            complement(1209..2099)
                     /gene="rpoH"
                     /locus_tag="VHZ56_06070"
     CDS             complement(1209..2099)
                     /gene="rpoH"
                     /locus_tag="VHZ56_06070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008597032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HEX4297572.1"
                     /translation="MAQSNLPILSAEGGLSRYLQEIRKFPMLEPNEEFMLAKRYKEHE
                     DPAAAQKLITSHLRLVAKIAMGYRGYGLPISEVISEGNVGLMHAVKRFEPDKGFRLAT
                     YAMWWIRAAIQEYVLRSWSLVKIGTTAAQKRLFFNLRKVKGQIAALDDGNLHPDQVKQ
                     IATTLRVTEADVVSMNQRLTGDASLNAPMRADEGSSEWQDWLVDDTPDQETMLGNSEE
                     YDERMGMLKGAMADLNEREKAIFQARRLKDDPATLEELAQEYNVSRERIRQIEVRAFE
                     KVQEAVQHAAREKARARETA"
     gene            complement(2308..3327)
                     /locus_tag="VHZ56_06075"
     CDS             complement(2308..3327)
                     /locus_tag="VHZ56_06075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEX4297573.1"
                     /translation="MSEADDEEFAVAVGPELAGFRLDAALARALPAFSRNRIKDLILA
                     GAVAINGQTAGEPRTKLKAGDALLLTAPAPEDPDPEPEDIPLSILYEDAELIVIDKPV
                     GMVVHPAPGSTHGTLVNALLYHCKGGLPGINGVKRPGIVHRLDKDTSGVMVAAKTERA
                     MASLAAQFADHGRTGPLHRAYTAFAWGRTQQGRGTVEAPLGRDQNNRLKQAVRRDGRE
                     AITHYAVEARFGGEGWEITRLHCELETGRTHQIRVHMAHIGHPLVADPLYAPGYVTKA
                     NRLPDPLKGIVRGLGRQALHAAELGFEHPVTHEEMSFEAPLPADLAALDAALQDFDQA
                     FARRM"
     gene            3326..3682
                     /locus_tag="VHZ56_06080"
     CDS             3326..3682
                     /locus_tag="VHZ56_06080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297574.1"
                     /translation="MCMTQPSSSDAPLPPETRALLARARRSFMFTIGLLILGVIAVGA
                     AVVYKSSSPASSGSSGNGDYSLATVKVPAGAEVIAAVAADGRLTVTYRSGQATSIRIF
                     DGKTGEMLREVPVSSE"
     gene            complement(3683..4861)
                     /locus_tag="VHZ56_06085"
     CDS             complement(3683..4861)
                     /locus_tag="VHZ56_06085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297575.1"
                     /translation="MDIENIMYFALGLLAAGLVALAVMPAVWRRAVRLTKKRIEAATP
                     ITMAEFRADKDQLRAEFALSTRRLEMNVEALRRRLSDQLRDINRKRNEVGAIKGERDN
                     QLMQMRELEEREAELRRRILDLEKEGADLAQRLRMRDREYADKTVQLETAREALRGKL
                     PRSIDVDGKALSGDYNTDMDVLLGKLDAERKRAGFLETQSRSLIGQLEAADKRHADAA
                     AVTAELRTSLARRDDAASATQDDLIDAEARIADAENRVNIVLADTTRVVEQASGQREQ
                     LLAEKLAIEDELERLRSKVLTVETSVMADWESDRIEQSHLREKLNDIASEVSRLVYAV
                     EGEVPDSDETLLERVQKYSDDAVMVADKRDEPRTPQPVGQGSSVSDRLAALRDIQSRT
                     "
     gene            complement(4998..5573)
                     /locus_tag="VHZ56_06090"
     CDS             complement(4998..5573)
                     /locus_tag="VHZ56_06090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1134 domain-containing protein"
                     /protein_id="HEX4297576.1"
                     /translation="MTMLKRLALSLALLLGLALPAAPALAAGPVSDTFSANEIVDTGG
                     KFFGSVSQGLASLVEKAASQFGLPNGYILGEEGSGALFIGGRYGQGTLYTRNKGDYPV
                     YWQGPSIGFDVGGDGSKVMMLVYNLKSTNDIFARYPGVDGSAYVVGGLGMTVMKAGNI
                     VLVPIRSGVGLRAGLNVGYLHFTDQPTWNPF"
     gene            5632..6372
                     /locus_tag="VHZ56_06095"
     CDS             5632..6372
                     /locus_tag="VHZ56_06095"
                     /inference="COORDINATES: protein motif:HMM:NF041384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YHS domain-containing (seleno)protein"
                     /protein_id="HEX4297577.1"
                     /translation="MAARSRVMSAQFAAMMRQIGKQILTIAAWLMLGALGHADPLVTT
                     IVSDPLTGIAIDGYDPVSYFTDPQPAAGKPDYEYLWQGVSWYFESAGNRDVFVRNPTI
                     YAPQYGGHCLTSLSRGYLSDGKPQLYVIDGLKLYFFYSTANRDAFMLSRTAALATAAQ
                     NWPRLVQDLQGPSAAAPISPSAGADASASQGNAVTADGAASPGAGDATASAPPAEVAA
                     ASEPASVEVPSAAASVAPADAGSNVQAK"
     gene            6392..7072
                     /locus_tag="VHZ56_06100"
     CDS             6392..7072
                     /locus_tag="VHZ56_06100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphotransferase family protein"
                     /protein_id="HEX4297578.1"
                     /translation="MAEIIELKATDLAAMLCSRVCHDLINPVGAIGNGLEVLADPNQT
                     AMADGAHELIANSAKHARAKLEFARLAYGASSTAGTDFDTRECERVARLLFEIEKADL
                     DWQVPLILLPKHKAKLLMNMLLIAAMAVPRGGVVKVEVVGPQGQEAFRFTCSSDPEKR
                     QRTLMPSGAEGLLSGAPEEGVDARGIQPFYTGILARMTDMALKIGIENDVFIFTATPI
                     ATTEQVAA"
     gene            7178..7552
                     /locus_tag="VHZ56_06105"
     CDS             7178..7552
                     /locus_tag="VHZ56_06105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4297579.1"
                     /translation="MKSCLIVDDSSVVRKVARRILEDLDYIVDEAEDGQEAFDKCRQE
                     MPDAILLDWHMPVMGGLEFLKLLRAYIGGTVPHVVFCVTENDIGQIALAMKAGASDYM
                     MKPFDRDVLESKFMPQELAEAG"
     gene            complement(7635..8345)
                     /locus_tag="VHZ56_06110"
     CDS             complement(7635..8345)
                     /locus_tag="VHZ56_06110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003527557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX4297580.1"
                     /translation="MRVLLIEDDSATAQSIELMLKSESFNVYTTDLGEEGVDLGKLYD
                     YDIILLDLNLPDMSGYEVLRTLRVAKVQTPILILSGLAGIEDKVRGLGFGADDYMTKP
                     FHKDELVARIHAIVRRSKGHAQSVIQTGDLTVNLDTKTVEVQAQRVHLTGKEYQMLEL
                     LSLRKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKKLSVATGGKNYIETVWGRG
                     YVLREPDESEVFAESSVA"
     gene            8732..10063
                     /gene="fliI"
                     /locus_tag="VHZ56_06115"
     CDS             8732..10063
                     /gene="fliI"
                     /locus_tag="VHZ56_06115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein export ATPase FliI"
                     /protein_id="HEX4297581.1"
                     /translation="MRALTADIEAIDDVEVFGRVKTVQGLLIEVVGPVRELRVGGRVS
                     IETTAGETLQSEIIGFRGGHALCLPFGPLSGVRLGCKAVFQSHDGAVYPADSWLGRVI
                     NANAEPIDGKGPLLRGPQAYALKQQPLPAHRRARVGAPLDMGVRVLNTFTTMCEGQRM
                     GIFAGSGVGKSVLMSMMVRNASADVAVVGLVGERGREVQEFITDYLGAAGMKHTVVVV
                     ATSDEAALMRRQAAYLTLALSEYFRDQGKRVLCLMDSLTRFAQAQREIGLAIGEPPTA
                     KGYPPTVFTELPRLLERAGPGLANSGSVTGLFTVLVEGDDHNEPIADAVRGILDGHIV
                     MERSIAERGRYPAVNVLRSISRTMPGCVPATVRPTLQKAREFMSVFADMEELIRLGAY
                     RKGSDPQVDRAIALNPALEAFLGQQREERTGIADGYTMLEAILAKAAPAAK"
     gene            10095..>10391
                     /locus_tag="VHZ56_06120"
     CDS             10095..>10391
                     /locus_tag="VHZ56_06120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export protein FliJ"
                     /protein_id="HEX4297582.1"
                     /translation="MKSRSESLIRLKKFQVDEKRRQVTQIEMMVADFQRMAAELDQQI
                     EIEQQKTGISDVAHFAYSTFAKAAIARRDNLLASAADMRDQLESAQDALAEAVED"
BASE COUNT         1743 a         3241 c         3548 g         1859 t
ORIGIN      
        1 ccgtgcggcg cgaacagccc ggtggcgcga gcttcgccgc tcagcgaggt atcgaggccg
       61 aggacgatgt cggccttggt agaactgcct tcgagctgga cgcggcgcag cgcgccgatc
      121 gagctgtcgg tggcgacgaa atcgaccgtg cagttgcaga tcttctcgaa cccggccttg
      181 aggccggggc ccgggccgta gtcggcggcg aacgcgtcgt aggtgtagat ggtgagggtc
      241 ggcttgtcct gggcgagcgc gggcgcggcc agaagtccaa gggcgaccgc aagcgcaaaa
      301 acgatccgga gcatggctcc aatccttctc gggttgcggc catgtcaggg gaaaagatca
      361 atggtgacgg gcacataacg gcccttgcca tctcgagctt cctccgccag catgacctgg
      421 ttcaggttca atgggtgttt ctcagcttcg tttccgaagc accccagcga gacgcctgag
      481 acttagatcg agttctcccc ccttgcaaga gcgcaccgcg tcgtccccgc tcatcaccta
      541 cgaaacgctc ctcgtgatcg tggggggcgg gaccgtggat cccgacctgc tgcgcgacct
      601 ttatgccagt ggcgggcacc tggtcgcggc cgatggcggc gccgaccaga tcgccgccgc
      661 cgggctgatg ccggaagcga tcatcgggga tttcgactca ctgcaaaatc cggacatctg
      721 gctcgggcgc acccggatga tccgcatcgc cgagcaggag acgacagatt tcgaaaaggc
      781 gctctactgc accgaggcgc cggtgacggt tgctgtgggg atgaccggcg gccgcttcga
      841 ccacaccctg gcggcactcg atgcggtggc ccgctacgcg cgcgaacgca tcatcatcct
      901 ggtcgacgcg ttcgacgtgg cgatggcgct gaccggtccg ttcgaattcg aggtggcgga
      961 aggcgatcgt gtgtcggtgc acccgctggc gccgatcaag ttccggcgct cgttcgggct
     1021 ccgctatccg ctcgatggcc tgcggctcgc cccgggcgag cgcaccggca catcgaacgc
     1081 ggcgatcgac ggggtgttct cgatcgagcc cgaaccgcgc tcgaaggcgc catggctgct
     1141 gatcgtcgat cgcaaatatc tgttcggcat cgcggcggcc gccagcgccg ggcggccgtg
     1201 aggctcggtc aggcggtctc gcgcgcccgg gctttctccc gggcggcatg ctgcacggct
     1261 tcctgaacct tctcgaaggc gcggacttcg atctggcgga tgcgctcgcg gctgacgttg
     1321 tattcctgcg ccagctcttc gagcgtcgcc ggatcgtcct tcagccggcg ggcctggaag
     1381 atcgccttct cgcgctcgtt gaggtcggcc atggcgcctt tcagcatgcc catccgctcg
     1441 tcgtattcct cggaatttcc gagcatggtt tcctggtccg gcgtgtcgtc gaccagccag
     1501 tcctgccatt ccgacgagcc ctcgtcggcg cgcatcggcg cgttgaggga cgcatcgccg
     1561 gtgaggcgct ggttcatcga aaccacgtcg gcctcggtga cgcgcagggt cgtcgcgatc
     1621 tgcttgacct ggtcggggtg caaattgccg tcgtcgagcg cggcgatctg gcccttcacc
     1681 ttgcgcaggt tgaagaacag ccgcttctgc gcggcggtgg tgccgatctt gaccagcgac
     1741 cacgagcgca ggacgtactc ctggatcgcg gcgcggatcc accacatggc gtaggtggcg
     1801 agacggaagc ccttgtcggg ctcgaaacgc ttcacggcgt gcatgaggcc gacattgcct
     1861 tccgaaatta cttcggaaat cggcaggcca tagccgcgat agcccatggc gatcttcgcc
     1921 acgagccgca aatgcgaggt gatcagtttc tgcgcggcgg cgggatcctc atgctccttg
     1981 tagcgcttgg cgagcatgaa ttcttcgttc ggctccagca tcggaaattt ccggatttcc
     2041 tggagataac ggctgaggcc gccctcggca gagaggatcg gcagattgga ctgggccatg
     2101 gaaagcaccc ccttcttccc ccgcattcgc ggcgggatcg gccagcggcg tccaagacgg
     2161 cacgccagtg gatgtcaaat tatataggtc gaaaacaggc tgtgataagg cccgcggccg
     2221 gccgggtgta tgcacgcaat gcatggctcc agtaacggtt cccgggaaga ttcgggtgcc
     2281 gaccacgccc cttgcagaca aatttcgcta catccgacgc gcgaacgcct ggtcgaagtc
     2341 ctgcaacgcc gcgtccagcg ccgccagatc ggccggcaac ggggcctcga acgacatctc
     2401 ttcgtgcgtg accgggtgtt cgaatcccag ctcggcggcg tgcagggcct gtcggccaag
     2461 gcctcggaca atgcctttca gcgggtcggg gagacgattg gccttggtca catagccggg
     2521 ggcgtagagc gggtcggcga ccagcggatg gccgatatgg gccatatgca cccggatctg
     2581 atgcgtacgg ccggtctcga gttcgcagtg cagccgggtg atctcccagc cttcgccgcc
     2641 gaagcgggct tcgaccgcat aatgggtgat cgcctcgcgg ccgtcgcggc ggacagcctg
     2701 cttgaggcgg ttgttctggt cgcggccgag cggtgcctcg acggtgccgc ggccctgctg
     2761 ggtgcggccc caggcaaacg cggtgtaggc gcggtgcagg gggccggtgc ggccgtgatc
     2821 ggcgaactgg gcagcgagac tggccatcgc ccgctcggtc ttggccgcca ccatgacgcc
     2881 cgaggtgtcc ttgtcgaggc ggtggacgat ccccggccgc ttgacgccgt tgatgccggg
     2941 caggccgccc ttgcagtggt agagcagcgc gttcaccagc gtgccatggg tcgagcccgg
     3001 tgccgggtgg accaccattc ccaccggctt gtcgatgacg atcagctccg cgtcctcgta
     3061 gagaatgctc agcggaatgt cctcgggctc cggatcgggg tcctcggggg ccggcgcggt
     3121 caacagcagc gcgtcgccgg ccttgagctt cgtccgcggc tcgcccgcgg tttgtccatt
     3181 gatcgcaacg gcgcccgcca gtatcaggtc cttgatgcgg ttgcgcgaga aggcgggaag
     3241 cgccctggcg agagccgcat cgagccggaa acccgcgagc tcggggccca ccgcgaccgc
     3301 gaattcctcg tcatcagcct cggacatgtg catgacccaa cccagttcca gcgacgcccc
     3361 actgcctccg gagacgcgcg cgctgctggc gcgggcccgc cggagcttca tgtttacgat
     3421 cgggctcctg atcctgggcg ttatcgcggt cggcgcggcg gttgtctaca aatcgtcgtc
     3481 gccggcaagc agcggatcga gcggcaatgg agattattcg ctcgccacgg tgaaggtccc
     3541 ggccggtgcc gaagtcatcg ccgccgttgc cgccgacggg aggctgacgg tgacctatcg
     3601 cagcgggcag gcgaccagca tccgtatctt cgacggcaaa accggcgaga tgctgcggga
     3661 agttccggtc agcagcgaat agtcaggtcc ggctctggat gtcccggagc gctgccaggc
     3721 ggtcggacac ggaactgccc tggccgaccg gctggggcgt gcgcggctcg tcgcgcttgt
     3781 cggcgaccat caccgcgtcg tccgagtatt tctgcacgcg ctccagcagc gtttcgtcgc
     3841 tgtcgggaac ctcgccctcg acggcgtaga ccagccggct cacttcggac gcgatgtcgt
     3901 tgagcttttc gcgcaaatgc gactgctcga tgcgatcgga ttcccagtcg gccatgacgc
     3961 tggtctcgac ggtcagcacc ttgctgcgaa gacgctcgag ctcgtcttcg atggccagtt
     4021 tttcggcgag cagctgctcg cgctggccgc tggcctgctc aaccacccgc gtggtgtccg
     4081 cgagcacgat gttgacccgg ttctcggcgt cggcgatgcg ggcctcggcg tcgatgaggt
     4141 cgtcctgcgt cgcactcgcg gcatcgtccc ggcgggcgag cgaggtgcgc agttcggcgg
     4201 tgactgccgc ggcatcggcg tggcgcttgt cggcggcttc aagctggccg atcagcgagc
     4261 ggctctgcgt ttcgaggaag ccggcgcgct tgcgctcggc gtcgagcttg cccagcagca
     4321 cgtccatgtc ggtattgtag tcgccgctca gcgccttgcc gtcgacgtcg atcgagcggg
     4381 gcagcttgcc gcgcagtgcc tcgcgggcgg tctcgagctg cacggtcttg tcggcatatt
     4441 cgcggtcgcg catgcgcagc cgctgggcga ggtcggcgcc ctccttctcg aggtcgagaa
     4501 tccggcgtcg gagctctgcc tcgcgctcct cgagctcgcg catctgcatc agctggttgt
     4561 cgcgctcgcc cttgatggcg ccgacttcgt tgcgcttgcg gttgatgtcg cgcagctggt
     4621 ccgacaggcg acggcgcagg gcctcgacgt tcatttcaag gcggcgggtc gacagcgcga
     4681 attcggcgcg cagctggtcc ttgtcggctc ggaactcggc catggtgatg ggggtcgccg
     4741 cctcgatgcg cttcttggtg aggcgcaccg cgcgccgcca gacggcaggc atgacggcga
     4801 gcgcgacgag gccggcagcg agcagcccca acgcgaaata catgatgttc tcaatgtcca
     4861 ttgagaggcc ccgacactag ccgatcatgg caagacggcc gcgaccggac gatgacaaag
     4921 acggcgacgc gccaccatct ttgccaccga ttaaccttac cgggaagggg ccgcggggca
     4981 gcggccggca acagtgctca gaacgggttc caggtgggct ggtcggtgaa gtggaggtag
     5041 ccgacattga ggccggcgcg gagcccgacg cccgagcgga tcggcaccag cacgatgttg
     5101 ccggccttca tcaccgtcat gccgaggccg cccaccacgt aggccgagcc gtcgacgccc
     5161 gggtagcggg cgaagatgtc gttggtcgat ttgagattgt agaccagcat catcaccttg
     5221 gagccatcgc cgccgacgtc gaagccgatc gaggggccct gccagtaaac cggataatcg
     5281 cccttgttgc gggtatagag ggtgccctgg ccatagcggc cgccgatgaa cagcgcgcca
     5341 gacccttcct cgccgaggat gtagccgttc ggaaggccga actggctggc ggctttttcc
     5401 acaagcgaag cgaggccctg cgagaccgag ccgaagaatt tgccgccggt gtcgacgatc
     5461 tcgttggccg agaacgtgtc ggacacgggg ccggccgcca gcgccggtgc ggccggcagc
     5521 gccagcccca gcagcaaggc gaggctcagg gcaaggcgtt tgagcatggt cagtctccgg
     5581 atgggcccgg catgcgggcc tttaccaagc gctcacccta aaggattagc cttggcggcg
     5641 cggtcccggg tgatgtcggc gcagttcgcg gcaatgatgc ggcaaatcgg taaacaaatc
     5701 ttaaccatcg cggcctggct gatgctgggt gcgctgggcc atgcggaccc gctggtgacg
     5761 acgatcgtca gtgatccgct gaccgggatc gcgatcgacg gctacgatcc ggtgagctac
     5821 ttcaccgacc cgcagccggc cgcaggcaag ccggactacg aatatctgtg gcagggggtg
     5881 tcctggtact tcgagagcgc cggcaaccgc gacgtgttcg tgcgcaatcc gacgatctat
     5941 gcgccgcaat atggcggcca ctgcctgacc tcgctcagcc gcggatatct cagcgacggc
     6001 aagccacagc tctatgtgat cgacggcttg aagctgtatt tcttctattc gacggccaat
     6061 cgcgatgcct tcatgctcag tcggacggcg gccctggcca cggccgcgca gaactggccg
     6121 aggctggtcc aggacctgca ggggccgagc gccgccgcac cgatctcgcc gtcagccggc
     6181 gcagacgcat cggcgagcca gggaaatgcc gtgacggccg atggcgctgc gtcaccgggt
     6241 gccggcgatg cgacggcctc ggcgccgccg gctgaggtcg cggcggcctc cgagccggcg
     6301 agcgtcgagg tgccatcggc ggcggcctcg gttgctccgg ccgatgcagg cagtaatgtg
     6361 caggcaaagt gattctaaca ggaacgatgc gatggcagaa atcatcgagc tcaaggcgac
     6421 ggatcttgcg gcgatgctct gctcgcgggt ctgccacgac ctgatcaatc cggtcggcgc
     6481 gatcggcaac ggcctcgagg tgctggccga cccgaaccag accgccatgg ccgacggcgc
     6541 gcacgagctg atcgccaatt cggccaagca tgcccgggcc aagctggaat ttgcccggct
     6601 ggcttatggg gcgtcatcca cggcgggcac ggatttcgac acccgcgagt gcgagcgcgt
     6661 ggcgcggctg ctgttcgaga tcgagaaggc ggatctcgac tggcaggtgc cgctgatcct
     6721 gttgcccaag cacaaggcca agctgctgat gaacatgctg ctgatcgcgg cgatggcggt
     6781 gccgcgcggc ggcgtggtca aggtcgaagt cgtcggtccg caggggcagg aagccttccg
     6841 ctttacatgc agctcggacc cggaaaagcg ccagcgtacg ctgatgccat cgggggccga
     6901 gggcctgctg tcgggggcgc ccgaagaggg cgtcgacgcg cgcggcatcc agccgttcta
     6961 caccggcatc ttggcgcgca tgaccgacat ggcgctcaag atcggcatcg agaacgacgt
     7021 cttcatcttc accgcgacgc cgattgccac gaccgagcag gtggcggcct gaaacggctg
     7081 tcgatgcaac aggtcacact tcgctaacca tccgttcgga cttttggcgg atagtcggcg
     7141 gtagcccata gcgtcaggcc ccgggcggag gtgtgccatg aagtcctgcc tcatcgtcga
     7201 tgattccagc gtcgtccgca aagtcgcgcg gcgcatcctc gaggatctcg actacatcgt
     7261 cgacgaagcc gaggacgggc aggaggcctt cgacaagtgc cggcaggaga tgccggacgc
     7321 gatcctgctg gactggcaca tgccggtgat gggcgggctc gagttcctca agctgctgcg
     7381 ggcctatatc gggggcaccg tgccgcacgt ggtattctgc gtcaccgaaa acgacatcgg
     7441 gcagatcgcg ctcgccatga aagcgggggc atccgactac atgatgaagc cgttcgaccg
     7501 cgatgtgctg gagtccaaat tcatgccgca ggagctggcc gaggccggct gagccgtctc
     7561 gaggctcccc ggcaataagc aaaaggcccc gcgcgatgcc ggggcctttt gcttattggt
     7621 gcagtgcgtc tgcttcaggc gacgctggat tcggcgaaga cctcgctctc gtcgggttcg
     7681 cgcagcacgt agccgcggcc ccagacggtt tcgatgtagt tcttgccgcc ggtcgcgacg
     7741 ctcagcttct tgcgcagctt acagatgaag acgtcgatga tcttcagctc gggctcgtcc
     7801 atgccgccgt agagatggtt gaggaacatc tccttggtga gggtggtgcc cttgcgcagc
     7861 gagagcagct cgagcatctg gtattccttg ccggtcaggt gcacgcgctg ggcctgcacc
     7921 tcgacggtct tggtgtcgag gttgaccgtg aggtcaccgg tctggatgac cgactgggcg
     7981 tggcccttgg agcggcggac gatggcgtgg atgcgggcga ccagctcatc cttgtggaac
     8041 ggcttggtca tgtagtcgtc ggcgccgaag ccgaggccgc gcaccttgtc ctcgatgccg
     8101 gccaggccgc tgaggattag aatgggagtc tggaccttgg cgacgcgcag ggtgcgcaac
     8161 acctcgtagc cgctcatgtc cggcagattg agatcgagaa gaatgatgtc gtagtcgtag
     8221 agcttgccga gatcgacacc ctcttcgccc aggtcggtcg tgtacacgtt gaaactttca
     8281 gatttgagca tcagttcgat gctctgcgcc gtggcgctgt cgtcctcaat caagagcaca
     8341 cgcatgccgt tccccttaaa ccgttcctgc ctggaaccgg ggtccgaaag gcgtttccgc
     8401 cgcgacccct aaccgaaccc tactggatat gactcaaacc taagcggcat tagttaacaa
     8461 agtttaattc tgatccgcaa tatgcaaaga ggatgtcacc gcatcttaac taacagtttg
     8521 attttcaaca tgaaaatggg tcaacgaaac ttaagatttt aggttaagaa agccctacaa
     8581 tcgactctgt cgactcaggc ttccggggtt ctggctgggg aaaggcggcg cgtcggaaaa
     8641 tccggcgaag agcgcgccca aaccgcatga ttggcgcttt ttgcttaacg ttcggttacc
     8701 cttgcgggat cgcgattcga ggatcgttcc aatgcgggcg ctgaccgccg atatcgaggc
     8761 tatcgacgac gtcgaggtgt tcggccgggt caagacggtg caaggcctgc tgatcgaggt
     8821 ggtgggcccg gtgcgcgagt tacgcgttgg cggccgggtc agcatcgaga ccaccgccgg
     8881 cgagaccctg cagtccgaaa tcatcgggtt tcgcggcggc cacgcgctct gcctgccgtt
     8941 cgggccgctg agcggggtgc ggctcggctg caaggcggtg ttccagagcc atgacggggc
     9001 ggtctatccg gccgacagct ggctgggccg ggtgatcaac gccaatgccg agccgatcga
     9061 cggcaagggg ccgctgctgc gcggaccgca ggcttatgcc ctgaagcagc aaccgttgcc
     9121 ggcgcatcgg cgggcgcggg tgggggcgcc gctcgatatg ggggtgcggg tgctcaacac
     9181 cttcaccacc atgtgcgagg ggcagcgcat gggcattttt gcgggctccg gtgtcggcaa
     9241 gtcggtgctg atgtcgatga tggtgcgcaa cgcatcggcc gatgtcgcgg tcgtcggcct
     9301 cgtcggcgaa cgaggtcgcg aggtgcagga gttcatcacc gattatctgg gcgctgccgg
     9361 catgaagcac acggtcgtgg tggtcgcgac ctcggacgag gcggcgctga tgcggcggca
     9421 ggcggcgtac ctgacgctgg cgctcagcga atatttccgc gaccagggca agcgcgtgct
     9481 gtgcctgatg gacagcctca cccgctttgc ccaggcgcag cgcgagatcg ggctggccat
     9541 cggcgagccg ccgactgcca agggctatcc gccgaccgtg ttcacggagc tgccgcggct
     9601 gctcgagcgg gccggcccgg ggctggccaa ttcgggcagc gttacgggtc tatttaccgt
     9661 tttagtcgaa ggtgacgatc acaatgaacc cattgcagat gccgtccgcg gcatcctcga
     9721 cgggcacatt gtgatggagc ggtcgattgc cgagcgggga cgctatcccg ccgtcaatgt
     9781 gttgcgatcc atctcgcgca cgatgccagg ttgcgtgccg gcgacagtcc ggccgacgct
     9841 gcagaaggcg cgggaattca tgtcggtctt cgccgacatg gaggagctga tccggctggg
     9901 ggcataccgg aagggatcag atccgcaagt ggatcgggcc atcgcgctca accccgcgct
     9961 ggaggccttc ctgggccagc agagggagga gcggaccggc atcgccgacg gctacaccat
    10021 gctggaggcg atcctggcca aggctgcgcc ggcggccaag tgaggtttga cttgcgttgt
    10081 aaggagtaca agtcatgaag tcgcgcagcg agagcctgat ccggctcaag aaattccagg
    10141 tcgacgagaa gcgtcgccag gtcacgcaga tcgaaatgat ggtcgcggac ttccagcgga
    10201 tggccgccga gctcgaccag cagatcgaaa tcgagcagca gaagaccggc atttccgatg
    10261 tcgcccattt cgcctattcc accttcgcca aggcggcgat cgcacggcgc gacaatctgc
    10321 tggcctcggc ggcggacatg cgcgaccagc tggagagcgc gcaggacgca ctggccgagg
    10381 cggtcgagga t
//
LOCUS       DATAZA010000239         5414 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_489013, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000239 DATAZA010000000
VERSION     DATAZA010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5414
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_489013"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1112
                     /locus_tag="VHZ56_06125"
     CDS             <1..1112
                     /locus_tag="VHZ56_06125"
                     /inference="COORDINATES: protein motif:HMM:NF014207.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HEX4297583.1"
                     /translation="LADLSALPTPTGDATANPSAADPSAPSLSALATSLADLGKAIAA
                     VAPTASQQLAALGSDLQAASADPAALARLGLSQPASQTPAGTPATTAQPAPMTTAATS
                     TPVASELAIPTAPGSATAKSSATARPGIDSDSSAAQSAAPATPTLTAAAVTQAGAAGQ
                     TGSDAPQNSPDKLADAIAAAVARDKADAPATDTTATAAAAQPATVSAVAPRLAAAGAY
                     QAAATPAPNMSQVAFEMMSQFGKGSSSFSIRLDPAELGRVDVRMHVDASGTVNAKLTV
                     DRSETLDMFQRDRGSLEKALSQAGLDGSKTNLEFSLRQNPFAGMSGGDQRSSGSGAGS
                     TSFASASADDADVPAIASATLYRGTASTGGVNLFV"
     gene            1122..1790
                     /locus_tag="VHZ56_06130"
     CDS             1122..1790
                     /locus_tag="VHZ56_06130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook capping FlgD N-terminal
                     domain-containing protein"
                     /protein_id="HEX4297584.1"
                     /translation="MTVSGVSGTSTASDTSGLSTDSTTIAGNFDEFLQLLTTQLQNQN
                     PLDPLDTNQFTQQLVEFSGVEQQLKTNDYLSSLVGANSDTVNTSAVNYIGKTVSASGV
                     QSELVNNSATWNYTLPSDANVSLDIKDSSGNVVFSEKDSVQAGSGTFAWDGKDNEGNV
                     QPAGTYSISMTGTDSSGKVVNISTQTTGTVTGVDFTGSEPVLLVGSARLNLSDVTEVD
                     QPSS"
     gene            1991..2269
                     /locus_tag="VHZ56_06135"
     CDS             1991..2269
                     /locus_tag="VHZ56_06135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1153 domain-containing protein"
                     /protein_id="HEX4297585.1"
                     /translation="MTVQMRPRVKYVIGPDGSPLTIADLPPKTTRRWVIRRKAEVVAA
                     VRGGLLSLEEACARYTLSVDEFLNWQAAIDKHGLAGLRTTWIQHYREG"
     gene            complement(2330..2950)
                     /locus_tag="VHZ56_06140"
     CDS             complement(2330..2950)
                     /locus_tag="VHZ56_06140"
                     /inference="COORDINATES: protein motif:HMM:NF014816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEX4297586.1"
                     /translation="MLKVLGRITSINVRKVLWALDEMAIAHEREDWGLPVRDPNVPEF
                     LRLNPNAQVPVIVDDGFVLWESGAVLRYLGDKAGSDLWPRSAEERARVDQWLTWQGTE
                     LGPSWAYAVQALLRGNPPNPDPARIAASVMRWTAAMRILEGQLAAGSGFVANGRMSLA
                     DIVMGLSTHRWLSLPIDRPALPAVEAHHAAMAARPAAARYLGEGTP"
     gene            3097..4758
                     /gene="fliF"
                     /locus_tag="VHZ56_06145"
     CDS             3097..4758
                     /gene="fliF"
                     /locus_tag="VHZ56_06145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009431 - bacterial-type flagellum basal
                     body, MS ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body MS-ring/collar protein
                     FliF"
                     /protein_id="HEX4297587.1"
                     /translation="MNGIAQLLNRLGLQRVAAMAVVAVLMLGFFAFLIMRASTPQMAP
                     LYTGLSLDDSSAIVAELQKQNVPNEIRGDGDTILVPRDQVTALRMSLAGSGLPNKGQV
                     GYEIFDQQNALGATSFVQNINNVRALEGELARTISSLARIKSTRVHLVLPERALFSRD
                     KKDPTASIVVSVRGQLLPEEIAAIQHVVASAVEGLTPSHVTIADDNGSLLAAGVGDDA
                     DDATVIAGQEDERVTAVEDRLKTRIEDLLTNIVGDGRSRVQVSADLDLTHVTKTAETF
                     DPNGQVVRSTETKNVSNSSTQPGGSGQVSASTQLPGAATTSQPGTGTSPLEQGSTDEE
                     TTNYEISKTSQTEMTDPGAVKRLSVAVVVDGTYTTDPKGNSVYAPRDQATLDQIKALV
                     QSAIGFDQTRGDQITVANLQFANGPTPPAIGTSAPGLFDFTRDDLMNGAEMLVTLVIA
                     LALVFFVMRPLLKRVLSPEKQPLALPASAEINAVAMPVAAGAPQQAPTLEDAPPTSLQ
                     VPSWMKDARSQGAAQAQTLKTVGTLVQENPKQAALIVRDWLSSAA"
     gene            4767..>5414
                     /locus_tag="VHZ56_06150"
     CDS             4767..>5414
                     /locus_tag="VHZ56_06150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006940082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HEX4297588.1"
                     /translation="MAKIEQAMGRQLVVGGDATQRELQGDEKAAVLLLSLGPDFGRPI
                     LEELDEMEIKALSRTMVRLGPITQDMLDALFAEFVTHVSANGTVSGNSDTTQRLLLSF
                     LPADRVDAIMEEIRGPAGRNMWEKLSNVQEDVLASYLKNEYPQTIAVVLSKIATDHAS
                     RVLGALPEELAMDVVKRMLALDPVQKDILEKIETTLRTEFMSTLSHAKRRDSHEQM"
BASE COUNT          944 a         2023 c         1654 g          793 t
ORIGIN      
        1 tgctggccga cctcagtgcc cttcccaccc caacgggcga tgccacggcg aacccgtcgg
       61 ccgccgatcc gtcggcgccg tcgctgtccg ctctcgccac ctcgctcgcc gacctcggca
      121 aggccatcgc ggcggtggcg cccaccgcgt cgcagcagct cgccgcgctg ggcagcgacc
      181 tgcaggccgc cagcgccgac ccggcagcac tcgcccggct cggcctgtcg caaccggcat
      241 cccagacgcc ggccggcacg ccggcgacga ccgcccagcc ggcgccgatg acgactgcgg
      301 ccacgtcgac gccggtcgcc agcgagctcg ccatcccgac cgctcccggc tcggcgacgg
      361 caaagtccag cgccaccgcc cggcccggaa tagactccga ctccagtgcc gcgcagtccg
      421 cagcgccggc gacgccgacc ctcaccgccg ccgccgtcac ccaggccggc gcggccggcc
      481 agaccgggtc cgacgcgccg cagaattccc ccgacaagct ggccgacgcg atcgctgccg
      541 ccgtcgccag ggacaaggcc gacgcgccgg cgaccgatac caccgcaacc gccgccgcag
      601 cgcagcccgc gacggtgtcg gcggtcgcgc cgcgcctcgc cgccgccggg gcctaccagg
      661 cggccgcgac ccccgccccc aacatgagcc aggtcgcgtt cgagatgatg agccagttcg
      721 gcaagggctc gtcgagtttc tcgatccggc tcgatcccgc cgaactgggc cgcgtcgatg
      781 tgcgcatgca cgtcgatgcc agcggcacgg tcaacgccaa gctcaccgtc gatcgctccg
      841 agaccctcga catgttccag cgcgaccgcg gttcgctgga gaaggcgctg agccaggccg
      901 gcctcgacgg cagcaagacc aacctcgagt tctcgctgcg ccagaatccg tttgccggca
      961 tgagcggcgg cgaccagcgg tcgtccggct cgggcgcggg cagcaccagt ttcgccagtg
     1021 cctcggccga cgatgcggac gtcccggcga tcgcttcggc caccctttat cgcggcaccg
     1081 cctccaccgg cggcgtcaat ctctttgtct aggagcccca catgaccgtc agcggcgttt
     1141 caggcacgtc caccgcatcc gacacgtccg ggctgtcgac cgacagcacg accatcgccg
     1201 gcaatttcga cgagttcctg cagctcctca ccacccagct gcagaaccag aacccgctcg
     1261 atccgctcga caccaaccag ttcacccagc agctggtgga gttctcgggc gtcgagcagc
     1321 agctcaagac caacgactac ctgtcctcgc tggtcggcgc caattccgac accgtcaaca
     1381 ccagcgccgt gaactacatc ggcaagaccg tctcggcgtc gggcgtgcag tccgaactgg
     1441 tcaacaacag cgccacctgg aactacaccc tgccctccga tgccaatgtc agcctcgaca
     1501 tcaaggactc cagcggcaac gtggtgttct cggaaaagga cagcgtgcag gccggcagcg
     1561 gcaccttcgc gtgggacggc aaggacaacg agggcaacgt ccagccggcc ggcacctatt
     1621 cgatctcgat gaccggcacc gacagctccg gcaaggtcgt caacatctcg acgcagacga
     1681 ccggcaccgt caccggcgtc gatttcaccg gcagcgagcc ggtgctgctc gtcggatcgg
     1741 cccggctcaa cctctccgac gtcaccgagg tcgatcagcc gagctcgtaa actccggctt
     1801 aaccacgtca cgccgttgcc atgatccgag cccctgcgca caatcgcgta ttggcggcca
     1861 agcccctgat tcctcggcga ttccttcatg caacagagcg caattttaac gccttgtaga
     1921 cgttagctta ggcaaatttt aagcgcgatc cgctaggctc aaccaaggtc aggttgagtc
     1981 agtgagtaaa atgaccgtcc aaatgcgtcc ccgcgtgaag tacgtcatag gtccggacgg
     2041 cagtccgttg acgattgccg accttccgcc caagactaca cgccgctggg tcatccgccg
     2101 caaggcggaa gtggtcgccg ccgttcgcgg cggactgctg tcgctcgagg aggcgtgcgc
     2161 gcgctatacc cttagcgtcg acgaattcct caactggcag gccgccatcg acaagcacgg
     2221 cctggccggt ctcaggacca cctggatcca gcactaccgc gagggctgag ccgcctcccg
     2281 tcccttctcc ccaaagggga gaaggtggcg cgcagcgccg gatgagggcc tagggcgtcc
     2341 cttcccccag atatctcgcg gccgccggcc gcgccgccat cgccgcatga tgggcttcga
     2401 ccgccggcag cgccggacga tcgatcggca gcgacagcca gcgatgcgtc gagagcccca
     2461 tgacgatatc cgcaaggctc atgcggccgt tggcgacgaa gccactcccg gccgccagtt
     2521 gtccttcgag aatgcgcatc gccgcggtcc agcgcatcac cgacgccgca attcgcgccg
     2581 ggtcggggtt gggcggattg ccgcgcagca gcgcctgcac cgcgtaggcc cagctcgggc
     2641 cgagctcggt cccctgccag gtgagccact ggtcgacccg ggcgcgctcc tcggcactac
     2701 gcggccacag gtcgctgccc gccttgtccc caagataccg aagcaccgcg ccgctctccc
     2761 acagcacgaa tccgtcgtcg acgatcaccg gcacctgcgc attcggattg agccggagga
     2821 actccggaac gttcggatcg cggaccggca ggccccagtc ttcgcgctcg tgcgcgatgg
     2881 ccatctcgtc gagcgcccac agcactttgc gcacgttgat cgacgtgatg cgccccagga
     2941 ctttcagcat ggctcggacc ctccccggca tttcctgccg cttttcgcat ttcgcaacac
     3001 ggcgttaaga ccttctttac catccactag gtaatttttg cctatggggg ttcggcgtca
     3061 ggctcgccgc acccggggca atcggcgggt cacctggtga acggtattgc gcagctcttg
     3121 aaccgcctcg gcctgcaacg ggttgcggcc atggccgtcg tcgccgtgct gatgctgggg
     3181 ttcttcgcct tcctcatcat gcgcgcctcg acgccgcaga tggcgccgct ctacaccggc
     3241 ctcagcctcg atgattcgtc ggccatcgtc gccgagctgc agaagcagaa cgtccccaac
     3301 gagattcgcg gcgacggcga caccatcctt gtgccgcgcg accaggtcac cgcgctgcgc
     3361 atgtcgctgg ccggcagcgg gctgcccaac aagggccagg tcggctacga aatcttcgac
     3421 cagcagaatg cgcttggcgc caccagcttc gtgcagaaca tcaacaatgt gcgcgccctc
     3481 gagggcgagc tggcccgcac catttcttcg ctggcccgca tcaagtccac ccgcgtccac
     3541 ctggtgctgc ccgagcgcgc cctgttctcg cgcgacaaga aggaccccac ggcctcgatc
     3601 gtcgtctcgg tccgcggcca gctgctgccc gaggaaatcg cggcgatcca gcacgtcgtg
     3661 gcctccgccg tcgagggcct gacgcccagc cacgtcacca ttgccgacga caacggcagc
     3721 ctgctggctg ccggcgtcgg cgacgatgcc gatgatgcga cggtcatcgc cggccaggag
     3781 gacgagcggg tgaccgccgt cgaggaccgg ctcaagacgc gcatcgagga tctgctcacc
     3841 aatatcgtcg gcgatggccg gtcgcgggtg caggtcagcg ccgacctcga tctcacgcac
     3901 gtcaccaaga ccgccgaaac gttcgacccg aacggccagg tcgtccgctc gaccgagacc
     3961 aagaacgtca gcaactcctc gacccagccg ggcggctcgg gccaagtcag cgcctcgacg
     4021 cagctgccgg gcgccgctac caccagccag cccggcaccg gtaccagtcc gctcgagcag
     4081 ggctcgaccg acgaggagac caccaactac gaaatctcca agaccagcca gaccgagatg
     4141 accgaccccg gcgccgtcaa gcgcctgtcg gtcgcggtgg tcgtcgacgg cacctacacc
     4201 accgacccca agggcaattc ggtgtacgcg ccgcgcgacc aggcgacgct cgaccagatc
     4261 aaggcgctgg tgcagtcggc gatcggcttc gaccagaccc gcggcgacca gatcaccgtc
     4321 gccaatctgc agttcgccaa cggcccgacc ccgccggcca tcggcacctc ggcccccggc
     4381 ctcttcgact tcacccgcga cgatttgatg aacggcgccg agatgctcgt gacgctggtc
     4441 atcgccctcg ccctggtgtt cttcgtcatg cggccgctgc tcaagcgcgt gctgtcgccc
     4501 gaaaagcagc cgctggcgct gccggcgagt gccgagatca acgccgtggc gatgcccgtc
     4561 gccgccggcg cgccacagca ggcgccgacg ctcgaggacg cgccgcccac ctcgctgcag
     4621 gtccccagct ggatgaagga cgcccgctcg cagggggcgg cgcaggccca gaccctcaag
     4681 acggtcggca cgctggtcca ggaaaacccc aagcaggccg cgctcatcgt gcgcgactgg
     4741 ctctcgagcg cggcgtgagc tgaccgatgg ccaagatcga acaggcgatg ggcaggcagc
     4801 tggtggtcgg gggcgacgcc acccagcgcg agctgcaggg cgacgagaag gccgcggtgc
     4861 tgctgctctc gctcggtccc gattttggcc gtcccatcct cgaagagctc gacgagatgg
     4921 agatcaaggc gctgtctcgg accatggtcc gcctcggccc gatcacccag gacatgctcg
     4981 acgcgctgtt tgccgaattc gtcacccacg tctcggccaa cggcacggtc tcgggcaact
     5041 ccgacaccac gcagcggctg ctgctgtcgt tcctgcccgc cgaccgggtc gacgccatca
     5101 tggaggaaat ccgcggaccc gccggccgca acatgtggga gaagctctcc aacgtgcagg
     5161 aggacgtgct cgcctcctat ctcaagaacg aatatcccca gaccatcgcc gtggtgctga
     5221 gcaagatcgc caccgatcac gccagccggg tgctcggcgc cctccccgag gagctcgcca
     5281 tggacgtggt caagcgcatg ctggcgctcg acccggtgca gaaggacatc ctcgaaaaga
     5341 tcgagaccac gctgcgcacc gagttcatgt cgacgctgag ccatgccaag cgccgcgaca
     5401 gccacgagca gatg
//
LOCUS       DATAZA010000240         2353 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1303394, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000240 DATAZA010000000
VERSION     DATAZA010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2353
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1303394"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(222..962)
                     /locus_tag="VHZ56_06155"
     CDS             complement(222..962)
                     /locus_tag="VHZ56_06155"
                     /inference="COORDINATES: protein motif:HMM:NF019322.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX4297589.1"
                     /translation="MVLVRTRPLLPDVVRSELRRAIIEGEFPPGSKLPNEESLCTRFA
                     VSRITLREAVRGLIEDGYVLRRQGAGTFVTAGPALRNSLDTNFSYTEYLESTGIRVSK
                     KVLDARRVAAEDDVVADLELAHDAEIVVIRRVRIAGRKPAIYSIDSLPADIVDPRRDV
                     KAFSRSLYKLLSSRGHDIDHARAIVTPVIATAEIGRILEVPAGTPLQHLKQVDFDTAG
                     RPVMRSLEWHVPSVIELRVYRRGPGPMP"
     gene            complement(1061..1951)
                     /locus_tag="VHZ56_06160"
     CDS             complement(1061..1951)
                     /locus_tag="VHZ56_06160"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX4297590.1"
                     /translation="MAGDAIALPADKVQEARRRWQLPHDWKSQTAMGIALVVGALVMI
                     VPFVWMFTTSLSRKADISMPRTPSLWPPDPSLFNYKIATDNLPIVRLYFNSLVVVGAT
                     TAGYLFLCSLAGYAFAKGRFPGKSALFVAFLATLFIPFETRMIPLYLLMGQLHLTNTY
                     AALILPFLAGGFGTFLMRQTIAGIPDELVEAARIDGASEFRIFWTIILPLCKPTLATL
                     AILNMIWRWNDVLWPLLVTSDASMYTVTQGLALEGHSQGTYTGVALASAVLAIAPVIL
                     AYLFLQRYVIRSVASSGIKG"
     gene            complement(1951..>2353)
                     /locus_tag="VHZ56_06165"
     CDS             complement(1951..>2353)
                     /locus_tag="VHZ56_06165"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX4297591.1"
                     /translation="IWAGLGYFIIVILAGLQSIPTDLYDAAAIDGASPLQSWWHITLP
                     SLRPTFVFLIMTGTIDALARFSDLWTLGGPGGSPARSLQSIVMYIFQQGFVGSDFSLS
                     AAAAVVFFVMVLVVTSIAFWGFLRREFTAVR"
BASE COUNT          437 a          733 c          851 g          332 t
ORIGIN      
        1 gctgtcgagg tcatggcgcg cggcgacgat gccgccaccc gattcgatgg cgccgaaata
       61 gatcgacgag ccaatgcgcg tggcgcgcgg ccgggtccac cagcaccacg ccatgtcgtc
      121 gacaagcggc atgggcggac ggagcacaag gggcatatcc atgcagacct caagtcatat
      181 gacgacttat gatacgaggt tcactcgccg ctgtccacgc ctcagggcat ggggcccggg
      241 ccgcggcgat agacgcgcag ctcgatcacc gagggcacgt gccactcgag cgagcgcatc
      301 accgggcggc cggcggtgtc gaaatccacc tgcttcagat gctgcagcgg cgtgccggcc
      361 ggcacctcga ggatgcggcc gatttcggca gtggcgatca ccggcgtgac gatggcgcgg
      421 gcgtggtcga tgtcgtggcc gcgcgacgac agcagcttgt agagcgagcg gctgaacgcc
      481 ttgacgtcgc ggcgcgggtc gacgatgtcg gccggcaggc tgtcgatcga atagatcgcg
      541 ggcttccgcc cggcgatgcg gacgcggcgg atgacgacga tctcggcgtc gtgggcaagc
      601 tcgaggtcgg cgacgacgtc atcctcggcg gcgacgcggc gggcatcgag caccttcttg
      661 gagacccgga tgccggtgct ctccagatat tcggtgtagc tgaaattggt gtcgagcgaa
      721 ttgcgcagcg ccggaccggc cgtgacgaac gtgccggcgc cctgccggcg cagcacatag
      781 ccgtcctcga tcaggccgcg caccgcctcg cgcagggtga tgcggctcac cgcgaaacgg
      841 gtgcacagcg actcctcgtt gggcagcttc gagccgggcg ggaattcgcc ctcgatgatg
      901 gcgcgccgca gttccgagcg gacgacgtcg ggcagcagcg gccgggtgcg aaccagaacc
      961 atggggtctc cacgcgcttg caactcaacg gcaccataga cgtgcaaccc gccgtgtcca
     1021 tgtgccgccg ccgcccaccg gcggcaatcc accggtcttg ctagcccttg atgccgctcg
     1081 aagcgacgct gcgaatgacg tagcgctgca ggaacaggta agcgaggatc accggggcga
     1141 tggcgagcac cgccgaagcc agcgccaccc cggtgtaggt gccctgcgaa tggccctcga
     1201 gcgccagccc ctgcgttacc gtgtacatgc tggcatcgga ggtgaccagc agcggccaga
     1261 ggacatcgtt ccagcgccag atcatgttga ggatggcgag cgtcgccagg gtcggcttgc
     1321 agagcggcag gatgatggtc cagaaaatcc ggaactccga ggcgccgtcg atgcgggccg
     1381 cttccaccag ctcgtccggg atgccggcga tggtctggcg catcaggaag gtcccgaagc
     1441 cgccggcgag gaagggcagg atcagcgcag cgtaggtgtt ggtcaggtgc aactgcccca
     1501 tcaacaggta gagcgggatc atccgcgtct cgaacggaat gaacagcgtc gcgagaaagg
     1561 cgacgaacag cgccgacttg ccgggaaagc gccccttggc gaaggcgtag ccggcgagcg
     1621 agcagaggaa caggtagccg gccgtggtcg cgccgacgac gacgaggctg ttgaagtaga
     1681 gccgcacgat cggcaggttg tcggtggcga tcttgtagtt gaagaggctc ggatccggcg
     1741 gccacaggct cggggtgcgc ggcatcgaga tgtcggcctt gcggctgagc gaggtggtga
     1801 acatccatac gaacggcacg atcatgacca gggcgccgac gacgagggcg atgcccatcg
     1861 cggtctgcga tttccagtcg tgcggcagtt gccagcgccg ccgcgcctcc tgcaccttgt
     1921 ccgcgggcag cgcgatcgcg tccccggcca tcagcgcacc gccgtgaatt cgcggcggag
     1981 gaagccccag aaggcgatgc tggtgacgac cagcaccatg acgaagaaca ccacggcggc
     2041 cgccgccgag agcgagaaat cgctgcccac gaagccctgc tggaagatgt acatgacgat
     2101 gctctgcagc gaccgggcgg gcgagccgcc gggaccgccc agcgtccaca ggtcggagaa
     2161 gcgggccagc gcgtcgatgg tgccggtcat gatcaggaag acgaaggtcg ggcgcaggct
     2221 cggcagcgtg atgtgccacc acgattggag cggactcgcg ccgtcgatgg cggcggcgtc
     2281 gtagaggtcg gtggggatcg actgcaggcc ggcgaggatg acgatgatga agtagccgag
     2341 cccggcccag atg
//
LOCUS       DATAZA010000241         2868 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1070392, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000241 DATAZA010000000
VERSION     DATAZA010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2868
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1070392"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            20..976
                     /gene="rhaS"
                     /locus_tag="VHZ56_06170"
     CDS             20..976
                     /gene="rhaS"
                     /locus_tag="VHZ56_06170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014327310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015153 - rhamnose transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0033296 - rhamnose binding [Evidence IEA];
                     GO_process: GO:0015762 - rhamnose transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnose ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX4297592.1"
                     /translation="MIGGAMPAAMADNLKIALLVKNLGNGFFDAANKGAQEAAKELGN
                     VDIIYTGPTQATPEGQIDIINQLVSQKVTAICVSANDADALVPALQAAMKAGITVVSF
                     DSGVSKAGREVNLLASATDLIGDQNLKMANDLLNGQKGDVAILSATSTATNQNAWIDV
                     MKKDAGNYPNVNLTTVVYGDDKQDKSYTEAKGLIDSDPNLKVIIAPTTVGIAAAAQYV
                     EDNNLVGKVIVTGLGLPSEMINHVKTGAAPEFALWNPIDLGYAAVTIAYDIATGKEKP
                     AAGGTLSMGRLGKVTLDDDLSGPMAPPFVFNKDNIDQFSKVY"
     gene            1127..2632
                     /locus_tag="VHZ56_06175"
     CDS             1127..2632
                     /locus_tag="VHZ56_06175"
                     /EC_number="7.5.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018324141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HEX4297593.1"
                     /translation="MAEPTLTLSGVSKSFPGVKALSEVGLELYPGEVTALIGENGAGK
                     STLVKILTGVYQPDAGEIRLGAAPVVIPDAEAAFRLGITGTHQETVLFDDLTVAENIF
                     LGHPILNRFGFLDWPAMRRRSKQILDELEVDLDPDLRLRDLAIARKHLVAIARALSVD
                     ARIVIMDEPTAALSHKEVEELYIIVEKLKAEGKAILFISHKFEEIFRIADRYAVFRDG
                     RSVGSGLVADATPGKLISMMVGRTVETIFPKVAVTPGEVVFSVQGLCHPTEFADISFE
                     LRRGEILGFYGLIGAGRTELMQALFGVTRTSAGTVTLDGRPIALRKPSDAVDAGIVYV
                     PEERQRQGVVLALPVFQNMTLPILGRVSRNGFLDVAREFELTRKYAERLDLRASSLSQ
                     EVGTLSGGNQQKVVIGKWLATTPRVIILDEPTKGIDVGSKAAVHAFMGELVGQGLAVI
                     MVSSELPEILGMADRVIVMREGRMAGNFDRAGLTAETLVATATGNQPAEAA"
     gene            2632..>2868
                     /locus_tag="VHZ56_06180"
     CDS             2632..>2868
                     /locus_tag="VHZ56_06180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003511204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4297594.1"
                     /translation="MRINRDLLLAIIIVVMVGAVGLLTPSFVSPNNLRGLVNDTAILV
                     MMALGQMTVILTKCIDLSVAANVAFTGVVVALVNA"
BASE COUNT          507 a         1077 c          844 g          440 t
ORIGIN      
        1 cacggccatc gccgcggtga tgatcggcgg ggcgatgccc gccgccatgg ccgacaatct
       61 gaagatcgca ctcctggtca agaacctcgg caacggcttc ttcgacgccg ccaacaaggg
      121 cgcccaggaa gccgccaagg aactgggcaa cgtcgacatc atctacaccg gcccgaccca
      181 ggcgacgccg gaaggccaga tcgacatcat caaccagctg gtcagccaga aggtcaccgc
      241 gatctgcgtc tcggccaacg acgctgacgc cctcgtaccg gcgctgcagg ccgccatgaa
      301 ggccggcatc accgtcgtct ccttcgactc cggcgtcagc aaggccggcc gcgaggtcaa
      361 tctcctcgct tcggccaccg acctcatcgg cgaccagaac ctgaagatgg ccaacgacct
      421 gctcaacggc cagaagggcg acgtcgccat cctgtcggcg acctcgaccg cgaccaacca
      481 gaatgcctgg atcgacgtca tgaagaagga cgccggcaac tatcccaacg tcaacctgac
      541 cactgtcgtc tatggcgacg acaagcagga caagagctac accgaggcca agggcctgat
      601 cgactccgat ccgaacctca aggtcatcat cgccccgacc accgtcggca tcgccgccgc
      661 ggcgcagtac gtcgaggaca acaacctcgt cggcaaggtg atcgtcaccg gcctcgggct
      721 gccgtccgag atgatcaacc acgtcaagac cggcgccgcg ccggaattcg cgctgtggaa
      781 cccgatcgac cttggctacg ccgccgtgac gatcgcctac gacatcgcga ccggcaagga
      841 aaagccggcg gccggtggca ccctcagcat gggtcgcctc ggcaaggtga cgctcgacga
      901 cgacctgtcc ggtccgatgg cgcctccctt cgtgttcaac aaggacaata tcgaccagtt
      961 ctcgaaggtc tattgatcca ctcggtcccg gcggtgccac gccgccggga ccaccacccg
     1021 atgtcatccc cgcgcaggcg gggacccacc ctacctctcg cgcggaacca cgatggctcc
     1081 ccgccgtcga gggggtgaca ccccgcacgc tgaaccaggc gagcccatgg ccgaacccac
     1141 cctcacattg tcgggcgtgt ccaagagctt cccgggcgtc aaggcgctgt cggaggtcgg
     1201 gctcgagctc tatcccggcg aggtcacggc gctgatcggc gagaacggcg ccggcaagtc
     1261 gacgctggtg aagatcctga ccggcgtgta ccagcccgac gctggcgaaa tccgcctcgg
     1321 cgccgcgccc gtcgtcattc ccgacgccga agccgcgttc cgcctcggca tcaccggcac
     1381 ccaccaggag accgtgctct tcgacgacct caccgtcgcc gagaacatct ttctgggcca
     1441 tcccattctc aatcgcttcg gcttcctcga ctggccggcc atgcgccgcc gctcgaagca
     1501 gatcctcgac gagctcgagg tcgacctcga tcccgacctg cgcctgcgcg acctcgccat
     1561 cgcccgcaag cacctcgtcg ccatcgcccg cgcgctgtcg gtcgacgccc gcatcgtcat
     1621 catggacgag ccgaccgccg cgctctccca caaggaggtc gaggagctct acatcatcgt
     1681 cgaaaagctc aaggccgagg gcaaggccat ccttttcatc tcgcacaaat tcgaggaaat
     1741 cttccgcatc gccgaccgct acgcggtgtt ccgcgacggc cgctcggtcg gctcgggcct
     1801 ggtcgccgat gcgacccccg gcaagctcat ctcgatgatg gtcggccgca ccgtcgagac
     1861 catcttcccc aaggttgccg tgacccccgg cgaggtagtg ttctcggtgc agggcctctg
     1921 ccatccgacc gagttcgccg acatctcctt cgagctgcgc cgcggcgaaa tcctcggctt
     1981 ttacgggctc atcggcgccg gccgcaccga gctgatgcag gccctgttcg gcgtcacccg
     2041 caccagtgcc ggcaccgtca ccctcgacgg caggcccatc gccctccgca agccgtccga
     2101 cgccgtcgat gccggcatcg tctacgtgcc cgaggagcgc cagcggcagg gcgtcgtcct
     2161 cgcgctgccg gtgttccaga acatgacgct gccgatcctc ggccgcgtca gccgcaacgg
     2221 cttcctcgac gtggcgcgcg aattcgagct gacccgcaaa tacgccgagc gcctcgacct
     2281 gcgcgcctcg agcctcagcc aggaagtcgg caccctctcg ggcggcaacc agcagaaggt
     2341 ggtgatcggc aagtggctcg ccaccacgcc gcgcgtcatc atcctcgacg agcccaccaa
     2401 gggcatcgac gtcggctcca aggccgccgt ccacgccttc atgggcgagc tcgtcgggca
     2461 ggggctggcg gtcatcatgg tctcctccga gctgccggaa attctcggca tggccgaccg
     2521 cgtcatcgtc atgcgcgagg gtcgcatggc cggcaacttc gaccgcgccg gcctcaccgc
     2581 cgagacgctc gttgccaccg cgaccggcaa ccagccggcg gaggccgcgt gatgcggatc
     2641 aaccgcgacc tgctgctcgc catcatcatc gtcgtcatgg tcggcgccgt cggcctgctg
     2701 accccgtcct tcgtgtcgcc caacaacctg cgcggcctcg tcaacgacac cgccatcctg
     2761 gtgatgatgg cgctcggcca gatgacggtg atcctcacca agtgcatcga cctgtcggtt
     2821 gccgccaacg tcgccttcac cggcgtcgtc gtcgcgctgg tcaatgcc
//
LOCUS       DATAZA010000242         3062 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1303438, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000242 DATAZA010000000
VERSION     DATAZA010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3062
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1303438"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1663
                     /locus_tag="VHZ56_06185"
     CDS             <1..1663
                     /locus_tag="VHZ56_06185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TRCF domain-containing protein"
                     /protein_id="HEX4297595.1"
                     /translation="PYEETEDQLIAISAVFDDLTTGKVMDRLVCGDVGFGKTEVALRA
                     AFAVAMSGKQVAVVVPTTLLARQHFRTFTERFAGLPVKVAQASRLVSAPELKAAKEGI
                     ADGTVDIVIGTHALLSKSIAFKNLGLLVVDEEQHFGVGHKERLKELRANVHVLTLTAT
                     PIPRTLQLALTGVRDLSLLATPPVDRLAIRTFISPFDPISIREALLREKYRGGQAFYV
                     VPRIKDQPDIAEFLREQVPEVSFVVANGQMPASELDDIMNNFYDGKFDVLLATTIVES
                     GLDIPNANTLVVHQADHFGLAQLYQIRGRIGRSKQRAYALFTVPAQKKLTDTAERRLN
                     VLQSLESLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQAMLEEAVASLKDG
                     AADYEDANEWSPQISLGMPVMIPEHYVPDLQVRMQLYRQLGDLKDAREIDAAGAELID
                     RFGPLPDEVEALLKVILVKALCRAANVEKVEAGPKGAVVTLRHNEFPNPAGLVQMVSD
                     PGMAVRLKPDQKLVFARDWPNAASRLKGAAAILSRMARLAEAVAA"
     gene            1894..2613
                     /locus_tag="VHZ56_06190"
     CDS             1894..2613
                     /locus_tag="VHZ56_06190"
                     /inference="COORDINATES: protein motif:HMM:NF018482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HEX4297596.1"
                     /translation="MNFKSLLVAGLALALLALPDAVFAQDASSSAPAAAPAPASGASS
                     APATAADASSQEQPNQNWLKICDPIANNQRACIMRQVVVTQNRQFLGSFLLRDDPGQQ
                     SRLLAVAAVPLGVLLPFGVSWQIDDGKPVRVPYMLCDPQSCSTQLVVNEAYVNSLKKG
                     HKLILTAKNRKNEDLTISIDLSGFTGVYDGEAALTFDEFNKNASGEAALEKILADRAE
                     AARQKLDSSQPGTSSSSAPAQ"
     gene            complement(2659..>3062)
                     /locus_tag="VHZ56_06195"
     CDS             complement(2659..>3062)
                     /locus_tag="VHZ56_06195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007822495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX4297597.1"
                     /translation="LTPAHMFLLSTLSVDVAGRDSIVLVGEAAHAFPPIGAQGLNLGL
                     RDVADLAAALAATPGTGPDFGRAVAADYARRRAGDLMRTGTVVDTLFRSLLADFLPAQ
                     VLRAGGLWALKLAPPLRKAAFDIGMGVRSAQ"
BASE COUNT          540 a         1043 c         1013 g          466 t
ORIGIN      
        1 cccctatgag gaaaccgagg accagctcat cgccatctcg gcagtcttcg acgacctcac
       61 gaccggcaag gtcatggacc ggctggtctg cggcgacgtc ggcttcggca agaccgaggt
      121 ggcgctgcgg gcggcgttcg ccgtcgccat gtcgggcaag caggtggccg tggtggtgcc
      181 gacgacgctg ctcgcacggc agcacttccg taccttcacc gagcgctttg ccggcctgcc
      241 ggtgaaggtc gcgcaggcgt cgcggctggt gagcgcgccg gagctgaaag cggcgaagga
      301 aggcatcgcc gacggcaccg tcgacatcgt catcggcacc catgcgctgc tgtcaaagtc
      361 catcgcattc aagaatctcg gcctgctggt ggtcgacgag gagcagcatt tcggcgtcgg
      421 ccacaaggag cggctgaagg agctgcgcgc caacgtccac gtgctgacgc tgaccgcgac
      481 gccgatcccg cgcaccctgc agctggccct gaccggcgtc cgcgacctgt cgctgctggc
      541 gacgccgccg gtcgaccggc tggcgatccg caccttcatt tcgccattcg atccgatctc
      601 gatccgcgag gcgctgctgc gcgagaaata tcgcggcggg caggcgttct acgtcgtgcc
      661 gcggatcaag gaccagccgg acatcgccga gttcctgcgc gagcaggtgc cggaggtctc
      721 gttcgtcgtc gccaacggcc agatgccggc gagcgagctc gacgacatca tgaacaattt
      781 ctacgacggc aagttcgacg tgctgctggc caccaccatc gtcgaatccg gcctcgacat
      841 ccccaacgcc aatacgctgg tcgtccacca ggccgatcat ttcgggctgg cgcaactcta
      901 ccagatccgc ggccgtatcg gccggtccaa gcagcgggcc tacgcgctct tcaccgtgcc
      961 ggcgcaaaag aagctgaccg ataccgccga gcgccggctc aacgtcctgc agtcgctcga
     1021 gagcctcggc gccggcttcc agctggcgag ccatgacctc gatatccgtg gcgccgggaa
     1081 cctcctcggc gaggagcagt ccggccacat caaggaggtc ggcttcgagc tttaccaggc
     1141 gatgctggag gaggccgttg cctcgctcaa ggacggtgcc gcggactacg aggacgccaa
     1201 cgagtggagc ccgcagattt cgctgggcat gccggtgatg atccccgagc actacgtgcc
     1261 ggacctgcag gtgcggatgc agctctaccg ccagctcggc gatctcaagg acgcccgcga
     1321 gatcgatgcg gccggcgccg agctgatcga ccgcttcggg ccgctgcccg acgaagtcga
     1381 ggcgctgctc aaggtgattc tggtcaaggc gctgtgccgt gccgccaacg tcgagaaggt
     1441 cgaggccgga ccgaagggcg ccgtggtgac tctgcggcat aacgagttcc ccaatcccgc
     1501 cggactggtc cagatggtgt ccgacccggg gatggcggta cggctgaagc ccgaccagaa
     1561 gctggtgttc gcccgcgact ggccgaacgc ggcctcgcgg ctcaagggcg cggcggccat
     1621 tctcagccgc atggcgaggc tcgccgaagc cgttgccgca tgagccgcat caatttgccc
     1681 gcctagggtc aaattgatgc cgggaatccg gagcaggaat cacagcattc aacagcagca
     1741 gcgcgatccc atgcagcggc gcaacagcag cgggagaaac atttggaaag ccctcccggt
     1801 catgttattg cccgaattcg cccattgaag ggcacgccat atgcaagacg gccgcagagc
     1861 cgtgcgatcg ctcgggaacc tcaaggaatt tcgatgaatt tcaaatcgct tctcgtcgca
     1921 ggtctggctt tggccctgct ggcgcttccc gatgcggtct tcgcgcagga tgcttcctct
     1981 tcggccccgg ccgccgctcc ggccccggca agcggcgcct cctcggcgcc ggcgacggca
     2041 gccgatgcga gttcgcagga gcagcccaac cagaactggc tgaagatttg cgacccgatc
     2101 gccaacaacc agcgcgcctg catcatgcgc caggtggtgg tgacccagaa ccgccagttc
     2161 ctcggctcgt tcctgctgcg cgacgatccc ggccagcaga gccgcctgct ggcggtggcg
     2221 gcggtgccgc tcggcgtcct gctgccgttc ggcgtgagct ggcagatcga cgacggcaag
     2281 ccggtgcgcg tcccctacat gctgtgcgac ccgcagtcct gctcgaccca gctggtggtc
     2341 aacgaggcct acgtcaacag cctcaagaag ggccacaagc tcatcctcac cgccaagaac
     2401 cgcaagaacg aggatttgac gatcagcatc gacctcagcg gctttaccgg cgtctatgac
     2461 ggcgaagcgg cgctgacctt cgacgaattc aacaagaacg cttcgggcga agcggcgctg
     2521 gaaaagatcc tcgccgaccg ggccgaggcg gcccgccaga agctcgacag ctcgcagccg
     2581 ggcacgtcga gctcatccgc gccggcgcag tagcgccggc atcagcgtgt ttgaaagggc
     2641 gcctttgggc gcccttttct attgggccga gcggacgccc atgccgatgt cgaaggccgc
     2701 cttgcgcagc ggcggcgcca gcttgagggc ccacagcccg ccggcccgca gcacctgcgc
     2761 cggcaggaag tcggcgagca gcgagcggaa cagcgtgtcg acgacggtgc ccgtccgcat
     2821 caggtcgccg gcgcggcggc gcgcatagtc cgcggcgacc gcccggccga aatccggccc
     2881 ggtccccggc gtcgcggcga gcgcagccgc gaggtcggca acatcccgca ggccgagatt
     2941 gaggccctgc gcaccgatgg gcggaaaggc atgcgcggcc tcgccgacga ggacgatgct
     3001 gtcgcgtccg gcgacgtcga cgctgagcgt cgaaagcagg aacatgtgcg ccggcgtcag
     3061 ca
//
LOCUS       DATAZA010000243         1767 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_838364, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000243 DATAZA010000000
VERSION     DATAZA010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1767
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_838364"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..320)
                     /locus_tag="VHZ56_06200"
     CDS             complement(<1..320)
                     /locus_tag="VHZ56_06200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease"
                     /protein_id="HEX4297598.1"
                     /translation="MIARLFPRLGAMLLTLLLLGCSSVLGPGVAVTTTDGQMAPLVSD
                     TGAPEDDIIGAREAPKIIAQYGGIYSDRPAEIMLAQIVSKLLAAADEPNDKFTVTILD
                     TADV"
     gene            complement(317..1084)
                     /locus_tag="VHZ56_06205"
     CDS             complement(317..1084)
                     /locus_tag="VHZ56_06205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEX4297599.1"
                     /translation="MTLLAIAAAPACEGLRDGPLGTVTQIVDGDTLLLDSGRVVRLVG
                     IQAPHLALGRDGLDDWPEGETARQALATIALGQKVILRYGGAETDRYGRALAQVFVRD
                     DPEIWVQQRMLATGMARVYSFPDNRACLPELFAAESGARSQRLGIWADPYYTVRRAER
                     PDDLLPLAGHFELVEGRVLKAEKTGGGVYLNFGRRFKEDFTAVIDSRALRLFTHDKID
                     PLRLAGLLVRIRGWLEVKDGPRIEVSHPEQIEVLAAP"
     gene            1262..>1767
                     /locus_tag="VHZ56_06210"
     CDS             1262..>1767
                     /locus_tag="VHZ56_06210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297600.1"
                     /translation="MLVESLIYARSWGRTPARFRPFLVDAVGLWARGNRQFRAWTPHL
                     NKTIAVLDTTIDDIASRRTVAVLGSGPLFDVPIESLARNFRRVLLVDRAHLSTIDHRV
                     GRYGNVERVWRDLAPEGDLHPLRFLADIPELDWVISVNLLSQIGRAAPEGRERQAIDA
                     HLDGLAALP"
BASE COUNT          269 a          645 c          584 g          269 t
ORIGIN      
        1 ttgacgtcgg cggtatcgag gatggtgacg gtgaacttgt cgttcggctc gtcggccgcc
       61 gccagcagct tgctgacgat ctgcgccagc atgatctcgg ccggccggtc ggagtagatg
      121 ccgccatatt gcgcgatgat cttgggcgcc tcgcgggcgc cgatgatgtc gtcctcgggc
      181 gcgccggtgt ccgacaccag cggcgccatc tgcccgtcgg tggtggtgac cgccacgccc
      241 gggccgagca cgctcgagca gcccagcaac agcagggtca gcagcatcgc accgagtcgc
      301 gggaacaggc gcgcgatcat ggggccgcca gaacctcgat ctgctcgggg tggctgacct
      361 cgatgcgcgg cccgtccttg acctcgagcc agccgcggat gcgcaccaac aggcccgcga
      421 gccgcagcgg gtcgatcttg tcatgggtga acaggcgcag cgcccggctg tcgatcaccg
      481 cggtaaaatc ctctttgaac cgccgcccga aattcagata gacgccgccg ccggtctttt
      541 ccgctttgag cacgcgccct tcgaccagct cgaaatggcc ggccaggggg agcaggtcgt
      601 ccggccgctc ggcgcgccgc accgtgtaat agggatcggc ccagatgcca agcctctgcg
      661 accgcgcacc cgactcggcg gcgaacagct ccggcaggca ggcgcggttg tccgggaacg
      721 aatacacccg cgccatgccg gtcgcgagca tccgctgctg cacccagatt tcgggatcgt
      781 cgcgcacgaa cacttgcgcc agcgcgcgcc cgtagcggtc ggtctcggcc ccgccgtagc
      841 ggaggatgac cttctggccc agcgcgatcg tcgccagcgc ctggcgcgcc gtctcgccct
      901 cgggccagtc gtcgaggccg tcgcgaccga gcgccaggtg cggcgcctgg atgccgacca
      961 gccgcaccac ccggccgctg tcgagcagca gcgtgtcgcc gtcgacgatt tgcgtgaccg
     1021 tgcccagcgg accgtcgcgc agcccttcgc aggcgggcgc cgcggcgatc gccagcaatg
     1081 tcacggccaa tgcgcccaaa accgcatgtc gatgcagcac gtccggcccc gcccaactgc
     1141 cgccatggtg caggaaaatg cggcaaaaat cccgccatgg ctgttgagag gacggccacc
     1201 gcgctaggcg gtccccccgc aaaccgctag cttgatctgc cccgggaccg gacgtcggac
     1261 gatgcttgtc gaaagcctga tctacgcccg cagctggggg cgcacgccgg cccgctttcg
     1321 tccgttcttg gtcgacgcgg ttggcctctg ggcgcgcggc aaccggcagt tccgggcatg
     1381 gaccccgcac ctcaacaaga ccatcgcggt gctcgacacc acgatcgacg acatcgcttc
     1441 gcgccgcacc gtcgccgtgc tcggttccgg cccgctgttc gacgtgccga tcgaaagcct
     1501 ggcgcgcaat ttccgccgcg tgctgctggt cgaccgggcg catctgtcga ccatcgacca
     1561 tcgcgtcggc cgctacggca acgtcgagcg ggtctggcgc gacctcgcac cggagggcga
     1621 tctccacccg ctgcgctttc tcgccgacat ccccgagctc gactgggtga tctcggtgaa
     1681 ccttctgagc cagatcggcc gtgccgcccc ggaaggccgc gagcggcagg cgatcgacgc
     1741 ccatctcgac gggctcgcgg cgctgcc
//
LOCUS       DATAZA010000244        11117 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1999157, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000244 DATAZA010000000
VERSION     DATAZA010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 11117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11117
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1999157"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..453)
                     /locus_tag="VHZ56_06215"
     CDS             complement(<1..453)
                     /locus_tag="VHZ56_06215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HEX4297601.1"
                     /translation="MTDLTPIRSRRNAPLPAHWDQLYSAVLSDALDAVGIMTQAMPPT
                     IRPLDDGLKLCGRARTGIYMETASVEPGINPYELEIAIVDDLKPGDVAVFACGGSSRI
                     APWGSLLSTATRARGAAGCITDGFVRDIIEIRRMGLPVFHAGIAPLDSK"
     gene            complement(465..2183)
                     /locus_tag="VHZ56_06220"
     CDS             complement(465..2183)
                     /locus_tag="VHZ56_06220"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010914655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IlvD/Edd family dehydratase"
                     /protein_id="HEX4297602.1"
                     /translation="MTKHQNRSAEWFARDGKYGFIPRSWMKSQGFAPDMLDGRPVIGI
                     CNTWSELTSCNRHLRELAEHVKRGVLTAGGFPLEFPVTSLGEPLMRPTTMMFRNLVAM
                     DVEETIRANPIDGVVLLAGCDKTTPALLMGAASCDIPTILVSGGPMLNGRFRGHELGS
                     GTDVFRLDEDYRTGKMTKADLDAAEAAMSRSAGSCMTMGTASTMASIAEAMGIALRMN
                     GTIPAPDSRRAVLAEQSGQRIVGLVNEGVTISQILTRAAFDNAVKVTGAIGGSTNAVV
                     HLLALAGRLGVDFTLEDWDRLGRDVPTLVDLKPAGRYLMEEFFDAGGVPVVMQRLGDA
                     IHRDAPTVSGLSMGEQIADAVCYNDEVIRPLDKALTSQGGLMVLKGNLAPDGAVLKPS
                     AASPRLMQHRGRALVFETADELRARIDDPDLDVDADTVLVLKNAGPRGYPGMPEVGSM
                     ALPKKLLQQGVTDMVRISDARMSGTAFGTVVLHVAPESAIGGPLALVRTGDIIVLDAQ
                     NRRLDLEVPADELARRRAALVLPPPAYERGYGRMFIDHVTQADKGADFDFLAGKSGTP
                     PSKVSF"
     gene            complement(2180..3022)
                     /locus_tag="VHZ56_06225"
     CDS             complement(2180..3022)
                     /locus_tag="VHZ56_06225"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX4297603.1"
                     /translation="MTLAMAAADDPPARSESGALGGGTRTAFLIVLIAALASLYPFGS
                     LIVTSILPPLNGHPMQLWQQLFTQIPVGTYMLNSAIVAGGAMVLVSIVSCMAGYGFAK
                     LPFPGRAQIFAILIAALSVPQATTIIANYFNFARVGGIGAYWAPILMYAAGATPFSVI
                     LMTNFFKALPDELVESAVIDGATYRQVFTMIMAPLAAPAVTTVAVLCFLGSWNDLLVA
                     LLWLPDPGTRTISVGIATLQGVRTNSIDLVLTGSLFSAIPPIVAFIVFQRYLVSGIVS
                     GIGK"
     gene            complement(3019..3927)
                     /locus_tag="VHZ56_06230"
     CDS             complement(3019..3927)
                     /locus_tag="VHZ56_06230"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX4297604.1"
                     /translation="MTAPALQTGKGGSWRGHAGAVRINGILFTLPAIALVGLVIGLPL
                     LQALYYSFTNWNGAHADWAGWTNYLSMLYDPELRRSLINSLCFFASVPFGLIPPFIVA
                     YLLHKDIPANRLLRALIFAPTALSWVVIGMVGRQFFALRGPVSGLFQIFGASAPNWLA
                     DSNFALAAVILTFNAAIFGINTIIFLTGLATVDRSTIEAAWLDGASELQVIGYVILPA
                     MRRFVEFVLIVTVITSATGIFAMIYVMTGGGPGSATLTLEFAVWRRAFATGSFGAGAA
                     IGITLMLLTLVAIGLIRLLLRQRSEA"
     gene            complement(4049..5323)
                     /locus_tag="VHZ56_06235"
     CDS             complement(4049..5323)
                     /locus_tag="VHZ56_06235"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX4297605.1"
                     /translation="MNIWLKSAFTAAMLLGTAGSVPAFADDITLTMWGQGDCPPDNCM
                     GQALIDAFQKANPGVKINLVQQPVDGYFTNLLAQSVIGRGPDIASMWAGGYMDQFKTY
                     MVDLHKYIPASILDTVNGVDFFSEGYDHKNAVYAAPNTAQWYIGYYNKKVFKDAGIDK
                     VPTDWDELSADSKLLKAKGYTPIVQGAVDGGASFAAWEDWSYLAAALQPSDWSKMLSG
                     QEPYNNPTMVTQLTKWNQLFKDGDFNQDAYNSPTALTDFTSGKAGMYLGGGSWQAAQL
                     VKAMGDDVGIIVPPYSDAPTKAAVSFAGGGYSVMNYSKNIDTAGKFAAFVLSDDGQKI
                     IAQFDAPTRPGFPNSNPLLNDMANLSGNSATVNYPMFDNFTQAPVTDAMARGVPQVLV
                     GQQSPADALSGMDAAYQSLPADQKTPVVFASK"
     gene            5550..6329
                     /locus_tag="VHZ56_06240"
     CDS             5550..6329
                     /locus_tag="VHZ56_06240"
                     /inference="COORDINATES: protein motif:HMM:NF013757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEX4297606.1"
                     /translation="MIEMRRAVQQNYSLESIDRMALVLKALEQAPEQSLDQVARASGL
                     NESTALRYLLSLGKHELVERNEASGRFRLGLSLFRLGTRSIGYRDIVTLSLPVMERLL
                     AEFGESVNLATRQQGQVVLLKVLESAVPTRKGAKAGETDTWHATSLGKAMLSAMEAAE
                     VVALVGSEPMAGITPNTLLRHDDLLRDLQRTMQRGYAIDDEESVEGLRCVGAAIRDHA
                     GVPRYALSVSGPKSRMPYQRTEEIGTALVAGAAEVSKGLGA"
     gene            6463..6993
                     /locus_tag="VHZ56_06245"
     CDS             6463..6993
                     /locus_tag="VHZ56_06245"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4297607.1"
                     /translation="MAQLLMKRPLGAPALPPASPVAVREATRDDIPGIARLMAAAYAE
                     QPWDAARVAKELFDVTDVPVVYVVDDGDKIIATASVRYHEDFPGAGYVHYVGVDPQAR
                     GRRLGTVVMARVMRRFAADGKTFSVLNTDDFRLPAIASYLGQGFVPQYPDADHEVRWS
                     RIFEQLAQSRRTAGNR"
     gene            6994..8139
                     /locus_tag="VHZ56_06250"
     CDS             6994..8139
                     /locus_tag="VHZ56_06250"
                     /inference="COORDINATES: protein motif:HMM:NF044745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4297608.1"
                     /translation="MAKAKSEQMRVGVVGARRGGGHIVALGKANSRIVLGGVYDPLPD
                     SSEAFTKQYGGKVYRNFEEAVEDCDLLVVASPQQYHAPQADYALRAGVHVLSEVPAAV
                     SIEQVNLLLAAARESKASYMIAENYCYHRLNLVVGAMAKAGVFGKLYFGESEYVHEMK
                     SWHSNAATGAPTWRRFWQVGKNGITYPTHSLGPLLEWMDDRITAISAIGTGRWTKPEY
                     EMEDTVTLSCRTRKGALLRMRLDLVSNRPEVWNYYSLQGTEGAYESGKLFGDKPRIYI
                     EGKSEPQAWQTLEEYADAYLPKRYAVPPDAAGHGGSDAWPLLDFVESIEQGTVPRFDI
                     YKALDMTLPGIVSEASIAQNGDWLAVPDPRTMTAGIGLNPGKEAPLY"
     gene            8148..8903
                     /locus_tag="VHZ56_06255"
     CDS             8148..8903
                     /locus_tag="VHZ56_06255"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4297609.1"
                     /translation="MGIWDDQVAAVTGSRGAIGAAIVTALTSLGAKAAGGDLGGAGDS
                     DGIASLDVTRPASIETWLDGIEARLGPLSIGIVCAGISRPGRLVETSDADWNDVVAVN
                     LTGAYFTARAMIQRMLAQGRPGRIVFVGSWAAHAPHPHIGAYSATKAGVRALCQTLAL
                     DHAADGILVNEVAPGIVNAGLSRELFRRDPALEQRTRAAIPSGGVLEPADVARDVVFL
                     ASPDNRHTTGACIVSDGGMSLASRMNPGTRGQR"
     gene            9037..10536
                     /locus_tag="VHZ56_06260"
     CDS             9037..10536
                     /locus_tag="VHZ56_06260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006200645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX4297610.1"
                     /translation="MNQHSVVIAGGGPTGLMLAGELALAGIDVAIVERRPGREMAGSR
                     AGGLHSRTIEIFDQRGIAERFLAEGQKAQTTGFAGVWFDISDFPTRHPYGLGLWQDHI
                     ERILAGWVEELQVPVYRGIEVTGFAQDATGVDIVGSDGQPLRAHYLVGCDGGRSLVRK
                     AAGIAFPGADPTTCNLIAEVEMTETPELGIYSSALGRHSFGRREYRIVDGKIVYADHG
                     PVQVMVTERQPGATTDPTLADLRETLVAACGTDYGAHDLRWISRFTDAARQAASYRVG
                     RVLVAGDAAHIHPPDGGQGLQTGVQDAVNLGWKLAQVVKQISPDSLLDTYQAERHPVA
                     ARVLRNAMASSVLRREDDRSKAVRETMAELLAMAEPRRHMAAMMSGLDIRYDFGDGHP
                     LLGRRMPDLELRTASGPQRVFGLLHQGRPVLLNLGEPGSIDMAPWADRVRLVEASYDG
                     AWELPVIGDVPAPTAVAIRPDGHVAWVGDGTATGLADALTKWFGPAGAA"
     gene            10641..>11117
                     /locus_tag="VHZ56_06265"
     CDS             10641..>11117
                     /locus_tag="VHZ56_06265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297611.1"
                     /translation="MRMLSTSIAVLALVGGLAATAPGFAAPPNGQGQGQGQGQGGNSP
                     IDCSLPANAQNPFCLQQQNGQNGGQGNHQFPNKGGNGNNQNGQGNNNQNGQGNSNDHN
                     PPPPPPNGMGQGGGSFNFSSHDRNQFHQRFNGINFGFFGIPDFSIRLGVTIPHSYGL"
BASE COUNT         1860 a         3595 c         3935 g         1727 t
ORIGIN      
        1 cttggagtcg agcggcgcga tgccggcgtg gaacaccggc aggcccatgc gacggatttc
       61 gatgatgtcg cgcacgaaac cgtcggtgat gcagccggcg gcgccgcggg cccgcgtcgc
      121 ggtcgacagc aggctgcccc aaggcgcgat gcgcgaggag ccgccgcagg cgaacaccgc
      181 cacgtcgccc ggcttcaaat cgtcgacgat ggcgatctcg agctcgtacg gattgatccc
      241 tggctcgacc gacgcggtct ccatgtagat tcccgtccgg gcgcggccgc agagcttcag
      301 cccgtcgtcg agcggccgga tggtgggcgg catcgcctgc gtcatgatgc cgacggcgtc
      361 gagcgcatcg gacagcacgg ccgaatagag ctggtcccag tgggcgggga gcggcgcatt
      421 gcggcgcgaa cggatggggg tcaggtcggt catggcgcct cgcttcagaa tgagactttg
      481 gaggggggag tgccgctctt gccggcaagg aagtcgaaat cggcaccctt gtcggcctgc
      541 gtcacgtggt cgatgaacat gcggccatag ccgcgctcgt aggccggcgg cggcagcacc
      601 agcgcggcgc ggcggcgggc cagctcgtcc gccggcacct cgaggtcgag ccggcggttc
      661 tgggcgtcga gcacgatgat gtcgccggtc ctgaccagcg ccagcgggcc gccgattgcg
      721 gactccgggg ccacgtgcag caccaccgtg ccgaaggcgg tgccgctcat ccgcgcatcg
      781 gaaatgcgca ccatgtcggt gacgccctgc tgcagcagct ttttgggcag cgccatgctg
      841 ccgacctcgg gcatgccggg atagccgcgc gggccggcgt tcttcagcac cagcacggtg
      901 tcggcgtcga catcgaggtc gggatcgtcg atgcgggcgc gcaattcgtc ggcggtctcg
      961 aacaccagcg cccggccgcg atgctgcatc agccgcgggc tcgcggcgga cggcttcagc
     1021 accgcgccgt cgggggcgag attgcccttc agcaccatca gcccgccctg cgaagtcagc
     1081 gccttgtcga gcgggcggat gacctcgtca ttgtagcaga cggcatcggc gatctgctcg
     1141 cccatgctga ggccgctgac ggtcggcgcg tcgcggtgga tggcgtcgcc gagccgctgc
     1201 atcaccaccg gcacgccgcc ggcatcgaag aattcctcca tcaggtagcg ccccgccggc
     1261 ttcaaatcga ccagcgtcgg cacgtcgcgg ccgagccggt cccagtcctc gagcgtgaag
     1321 tcgacgccga gccggccggc gagcgccagc aggtgcacca ccgcattggt cgagccgccg
     1381 atggcgccgg tcaccttcac cgcattgtcg aaggcggcgc gggtcaggat ctgcgaaatg
     1441 gtgacgccct cgttgaccag cccgacgatg cgctggccgc tctgctcggc gagcacggcg
     1501 cggcggctgt cgggcgccgg gatggtgccg ttcatcctca gcgcaatgcc catcgcctcg
     1561 gcgatcgagg ccatggtcga ggccgtgccc atggtcatgc aggagccggc cgagcggctc
     1621 atcgccgctt ccgccgcatc gaggtcggcc ttggtcatct tgccggtgcg atagtcttcg
     1681 tcgagccgga acacgtcggt gcccgagccg agctcgtggc cgcggaagcg gccgttgagc
     1741 atcgggccgc cgctcacgag gatggtcggg atgtcgcagc tggccgcgcc catcagcagc
     1801 gccggggtgg tcttgtcgca gccggcgagc agcaccacgc cgtcgatcgg gttggcgcgg
     1861 atggtctcct cgacgtccat cgccacgagg ttgcggaaca tcatggtggt cggccgcatc
     1921 agcggctcgc cgaggctggt gaccgggaat tcgagcggga agccgccggc tgtcagcacg
     1981 ccgcgcttga cgtgctcggc gagctcgcgc aggtgccggt tgcagctggt cagctccgac
     2041 caggtgttgc agatgccgat caccggccgg ccatcgagca tgtcgggcgc aaagccctgg
     2101 ctcttcatcc agctgcgcgg gatgaagccg tacttgccgt cgcgggcaaa ccattcggcg
     2161 ctgcgatttt gatgcttggt catttcccga ttcccgaaac gatgccgctg accaggtagc
     2221 gctggaagac gatgaaggcg acgatcggcg ggatggcgct gaacagcgag ccggtgagca
     2281 ccaggtcgat gctgttggtg cgcacgccct gcagcgtggc gatgccgacg ctgatggtgc
     2341 gcgttcccgg gtcgggcagc cacagcagcg ccaccaggag gtcgttccag ctgccgagga
     2401 agcagagcac cgccacggtg gtcaccgccg gggccgccag cggcgccatg atcatggtga
     2461 acacctgccg gtaggtggcg ccgtcgatca ccgcgctttc caccagctcg tcgggcagcg
     2521 ccttgaagaa attggtcatc aggatgaccg agaacggcgt cgcgccggcg gcgtacatca
     2581 ggatcggggc ccagtaggcg ccgatgccgc cgacccgggc gaagttgaaa tagttggcga
     2641 tgatggtcgt cgcctgcggc acgctcagcg cggcgatgag gatcgcaaag atctgcgccc
     2701 ggccgggaaa cggcagcttg gcgaagccgt agccggccat gcagctgacg atcgacacca
     2761 gcaccatggc gccgccggcg acgatggccg agttgagcat gtaggtgccg accgggatct
     2821 gcgtgaacag ctgctgccag agctgcatcg gatggccatt gagcggcggc aggatggagg
     2881 tgacgatcag cgagccgaac gggtagagcg aggcgagcgc cgcgatcagg acgatgagga
     2941 acgccgtccg ggtgccgccg ccgagcgcac ccgattcgga tcgggcagga ggatcgtccg
     3001 cagccgccat ggcgagcgtc atgcctcgct cctttgccgc agcagcaggc ggatgaggcc
     3061 gatggcgacg agcgtcagca gcatcagggt gatgccgatg gccgcgccgg caccgaacga
     3121 gccggtggcg aaggcgcgcc gccacaccgc gaattccagc gtcagcgtcg ccgagcccgg
     3181 gccgccgccg gtcatcacgt agatcatggc aaagatgccg gtggccgagg tgatgacggt
     3241 gacgatgagc acgaattcga cgaagcggcg catcgccggc aggatgacgt agccgatgac
     3301 ctgcagttcc gaggcgccgt cgagccaggc ggcctcgatg gtcgagcggt cgacggtggc
     3361 gaggccggtc aggaagatga tggtgttgat gccgaagatc gcggcgttga acgtcaggat
     3421 gaccgcggca agggcgaaat tgctgtcggc gagccagttg ggggcgctgg cgccgaagat
     3481 ctggaacagg ccgctcaccg ggccgcgcag cgcgaagaac tgccgcccga ccatgccgat
     3541 caccacccag ctcagcgccg tcggcgcgaa gatcagcgcc cgcagcagcc ggttggccgg
     3601 aatgtccttg tgcagcaggt aggcgacgat gaacggcgga atcagcccga acggcaccga
     3661 ggcgaaaaag cacaggctgt tgatcaggct ccgccgcagc tcggggtcgt agagcatgct
     3721 gaggtagttg gtccagccgg cccagtcggc gtgagcgccg ttccagttgg tgaagctgta
     3781 gtagagcgcc tgcagcaatg gcagcccgat caccagcccg acgagggcaa tcgccggcag
     3841 ggtgaacagg atgccgttga tccgcaccgc gccggcatgg ccgcgccagc ttccgccctt
     3901 gccggtttgc aatgccggtg ctgtcaacgc cgctccttat gcagacggtt cggcccagcg
     3961 gccggaatcc cgctccggcg cgccgcatcg cggcgcaccg gaggtgatgg acgggcagcc
     4021 gcgaggacaa gcggctaccc ggtccagctt acttcgaggc aaacaccacc ggtgtcttct
     4081 ggtccgccgg caacgactgg taggcggcgt ccatgccgct cagcgcgtcg gccgggctct
     4141 gctggccgac cagcacctgc ggcacgccgc gggccatggc gtccgtcacc ggggcctggg
     4201 tgaagttgtc gaacatgggg tagttcaccg tggcggaatt gcccgacagg ttggccatgt
     4261 cgttgagcag cggattgctg ttggggaagc ccggacgggt cggggcgtcg aactgggcga
     4321 tgatcttctg gccgtcatcg ctcaggacga aggcggcgaa cttgccggcc gtgtcgatgt
     4381 tcttggaata gttcatcacc gagtagccgc cgccggcgaa cgacaccgct gccttggtcg
     4441 gggcgtcgga atagggcggc acgatgatgc cgacgtcgtc gcccatggcc ttgaccagct
     4501 gggcggcctg ccacgagccg ccgccgaggt acatgccggc cttgccgctg gtgaagtcgg
     4561 tcagcgccgt cggggagttg taggcgtcct ggttgaaatc gccgtccttg aacagctggt
     4621 tccacttggt cagctgcgtg accatcgtcg ggttgttgta gggctcctgg ccggacagca
     4681 tcttgctcca gtcgctcggc tgcagcgcgg cggcgagata ggaccagtcc tcccaggcgg
     4741 cgaacgaggc accgccgtcg acggcgccct gcacgatcgg ggtgtagccc ttggccttga
     4801 gcagcttgga gtcggcgctg agctcgtccc agtcggtcgg gaccttgtcg atgccggcgt
     4861 ccttgaacac cttcttgttg tagtagccga tgtaccactg ggcggtgttg ggcgcggcgt
     4921 agacggcgtt cttgtggtcg tagccttccg agaagaagtc gacgccgttg accgtgtcga
     4981 ggatgctcgc gggaatgtat ttgtgcaggt cgaccatgta ggtcttgaac tggtccatgt
     5041 agccgccggc ccacatcgag gcgatatcgg gaccgcggcc gatcaccgac tgcgccagga
     5101 ggttggtgaa gtagccgtcg accggctgct gcacgaggtt gatcttgacg ccgggattgg
     5161 ccttctggaa ggcatcgatc agcgcctggc ccatgcagtt gtcgggcgga cagtcgccct
     5221 gcccccacat ggtcagcgtg atgtcatcgg cgaaggcggg cacgctgccg gcggtgccga
     5281 gcagcatggc ggcggtgaac gccgacttca gccatatgtt catggtcgtc tcccttggtc
     5341 ccgttgcgat ccgatgcggg ctccccggca tcgttttttg cgcgattttg tcgcgccaga
     5401 aaggcatatg tgtgcacgat ttctgacgat tgacagttgc agtagatgca attaaaccgt
     5461 cttccagtgc aatcacggtg acgctagggc cgacagaggg ggcgagtcaa gcgccttcga
     5521 cggggcccgg cgggacactg gcggagagga tgatcgagat gcggcgcgcc gtgcagcaga
     5581 actacagcct cgaatccatc gatcgcatgg cgctcgtgct caaggccctc gaacaggcgc
     5641 ccgagcagtc gctcgaccag gtggcgcggg cgtcggggct gaacgagtcg acggcgctgc
     5701 gctacctgct cagcctcggc aagcatgaac tggtggagcg caacgaagct tccggccggt
     5761 tccggctcgg cctcagcctg ttccggctgg gtacgcggtc gatcggctac cgcgacatcg
     5821 tcaccctgtc gctgccggtg atggagcggc tgctggcgga attcggggag tcggtgaacc
     5881 tcgcgacgcg gcagcagggg caggtggtgc tgctcaaggt gctcgagagc gcggtgccga
     5941 cccgcaaggg cgccaaggcc ggcgagaccg acacctggca cgccacctcg ctcggcaagg
     6001 ccatgctgtc ggcgatggag gcggccgagg tggtggcgct ggtgggcagc gagccgatgg
     6061 ccgggatcac ccccaacacc ctgctccgcc acgacgatct gctgcgcgac ctgcagcgca
     6121 cgatgcagcg cggctacgcc atcgacgacg aggaatcggt cgagggcctg cgctgcgtcg
     6181 gtgccgcgat ccgcgaccac gcgggggtgc cgcgctacgc cctcagcgtc tccggcccga
     6241 agagccgcat gccctaccag cgcaccgagg agatcggcac cgccctcgtc gccggcgccg
     6301 cggaggtctc gaaggggctc ggggcgtgac gcagaaacga ggcgcacata tggccttcca
     6361 ggccgcaaaa aatgctccac ctcgcgacca attcggccct agccatcagc acccgccgct
     6421 gctagttttc gtccagtaat ctatctattg cactggatgc aaatggccca gctcctcatg
     6481 aaacgcccgc tcggcgcccc cgccctgccg ccggcgagcc cggtcgcggt gcgcgaggcg
     6541 acgcgcgacg acatcccggg gatcgcgcgg ctgatggccg ccgcctacgc cgagcagccc
     6601 tgggacgcgg cgcgcgtcgc caaggagctg ttcgacgtga ccgacgtgcc ggtggtctat
     6661 gtcgtcgacg acggggacaa gatcatcgcc accgcttcgg tgcgctatca cgaggacttt
     6721 cctggcgccg gatacgtcca ttatgtcggc gtcgacccgc aggcacgcgg gaggcggctc
     6781 ggcaccgtgg tgatggcgcg cgtcatgcgg cgctttgcgg cggacgggaa gacgttctcg
     6841 gtcctcaaca ccgacgactt caggctcccg gcgatcgcct cctacctggg acagggattc
     6901 gtgccgcaat atcccgatgc cgaccacgag gtgcggtggt ccaggatttt cgagcaactg
     6961 gcgcagagtc gccgcacggc agggaacaga tagatggcga aggccaagag cgaacagatg
     7021 cgggtcgggg tggtcggggc gcggcgcggc ggcggccata tcgtggcact cggcaaagcc
     7081 aacagccgca tcgtgctcgg cggcgtctac gacccgctgc cagactcgag cgaggcgttc
     7141 accaagcagt atggcggcaa ggtctatcgc aatttcgagg aagccgtcga agactgcgac
     7201 ctgctcgtcg ttgcctcgcc gcagcaatat cacgcgccac aggccgacta cgcactgcgc
     7261 gccggggtgc atgtgctgag cgaagtgccg gcggcggtga gcatcgagca ggtcaacctg
     7321 ctgctggcgg cggcacgcga gtcgaaggcc tcgtacatga tcgccgagaa ctattgctac
     7381 caccggctga acctggtcgt cggcgcgatg gccaaggccg gggtgttcgg caagctgtat
     7441 ttcggcgagt ccgaatacgt ccacgagatg aagagctggc acagcaacgc cgcgaccggg
     7501 gcgccgacgt ggcgccgctt ctggcaggtc ggaaagaacg gcattacata tccgacgcac
     7561 agcctcggac cgctgctgga gtggatggac gaccgcatca cggcgatcag cgccatcggc
     7621 accggccgct ggaccaagcc cgaatacgag atggaggaca ccgtcaccct ctcctgccgc
     7681 acgcgcaaag gcgcgctgct gcggatgcgg ctcgatctcg tttccaaccg gcccgaggtc
     7741 tggaactact attcgctgca gggcacggaa ggcgcctacg agtccggcaa gctgttcggc
     7801 gacaagccgc ggatctacat cgagggaaag tccgagccgc aggcctggca gacgctcgaa
     7861 gagtatgccg acgcctacct gcccaagcgc tacgcggtgc caccggacgc agccggccac
     7921 ggcggttcgg acgcgtggcc gctgctcgat ttcgtcgagt cgatcgagca gggcacggtg
     7981 cctcgcttcg atatctacaa ggcgctcgac atgacgctgc ccggcatcgt ttcggaggcc
     8041 tcgatcgccc agaatggcga ctggctcgca gttcccgacc cgcgcacgat gacggcggga
     8101 atcggactca acccgggcaa ggaagcgccg ctctactaga ggtcgaagtg ggaatctggg
     8161 acgatcaggt tgcggcggtc acgggttcgc gcggcgccat cggcgcggcc attgtgacgg
     8221 cgttgacgag cctcggcgcc aaggccgcgg gcggcgatct cgggggggcc ggagacagcg
     8281 acggcattgc atctctcgac gtcaccaggc cggcgtcgat cgaaacatgg ctcgacggga
     8341 tcgaagcgcg cctcggtccc ctctccatcg gcatcgtatg cgccggtatc tcgcgtcccg
     8401 ggcgccttgt cgagacgagc gatgcggact ggaacgacgt tgtcgcggtg aacctgacgg
     8461 gggcctattt caccgcacga gccatgatcc aacggatgct ggcgcagggg cgccccgggc
     8521 gaatcgtgtt cgtcgggtct tgggccgcac atgcgccgca tccccacatc ggggcctatt
     8581 cggccaccaa ggccggggtg cgggcgctct gccagaccct ggcgctcgat catgcggccg
     8641 acggcatcct cgtcaacgaa gtggcgccgg ggatcgtgaa tgcgggattg tcgcgcgagc
     8701 tgttccgccg cgatccggcg ctcgaacagc ggacgcgcgc ggcgatcccc tcggggggcg
     8761 tgctggagcc ggccgacgtg gcgcgcgacg tggtgttcct ggcgtcgccg gacaaccggc
     8821 atacgaccgg tgcgtgcatc gtttccgatg gcgggatgtc gctcgcctca cggatgaacc
     8881 ccggaacacg aggccagcgc tgagggctga gcgagccttg ggcggccagt gccgcggccc
     8941 tctcccatac tgatatgtag cgcacaacgg gcttgcttca agaccccggc cgccctgtaa
     9001 gaagccgcct ccgaagccga ctcagggagc gcgaagatga accagcatag cgtggtgatt
     9061 gccggcggag gcccgacggg cctgatgctg gcaggcgaac ttgccctggc ggggatcgac
     9121 gtcgcgatcg tcgaacgccg gcccggccgg gagatggccg gctcgcgggc cggtggcctc
     9181 cattcgcgca ccatcgagat tttcgaccag cgcggcattg cggaacggtt tctcgccgag
     9241 ggacaaaagg cccagaccac cggcttcgcc ggcgtatggt tcgatatcag cgactttccc
     9301 acccggcacc cctacgggct cgggctgtgg caggaccaca tcgagcgcat cctcgccggc
     9361 tgggtcgagg aactgcaggt tccggtctat cgaggcatcg aggtgacggg cttcgcgcag
     9421 gacgcgacgg gcgtcgacat cgtcggcagc gacgggcagc cgctgcgggc gcactatttg
     9481 gtcggctgcg acggcgggcg gagcctcgtc cgcaaggcgg cgggcatcgc gttcccgggg
     9541 gcggacccga cgacctgcaa cctgatcgcc gaggtcgaga tgaccgagac gccggagctg
     9601 ggcatctaca gcagcgcgct cggccgtcat tccttcggcc ggcgggagta ccggatcgtc
     9661 gacggcaaga tcgtctatgc cgatcacggt ccggtgcagg tgatggtcac cgagcggcaa
     9721 ccgggagcga cgaccgaccc caccctggcc gacctgcgcg agaccctcgt ggccgcctgc
     9781 ggcaccgact atggggccca cgacctccgc tggatctcgc ggttcaccga tgcggcgcgg
     9841 caggccgcat cctaccgcgt gggccgggtg ctggtggcgg gcgatgctgc gcacatccat
     9901 ccgccagacg gtgggcaggg gctgcaaacg ggcgtgcagg atgcggtgaa cctcggatgg
     9961 aaactggcgc aggtggtcaa gcagatatcg ccggacagcc tgctcgatac ctaccaggcc
    10021 gagcgccatc cggtcgccgc gcgggtgctg cgcaacgcca tggcatcgag tgtgctgcgc
    10081 cgcgaagacg accgctcgaa ggcggtgcgg gagacgatgg ccgagctgct cgccatggcg
    10141 gagccgcgcc ggcacatggc ggcgatgatg tccggcctcg atatccgata cgatttcggc
    10201 gacggccacc cgctgctcgg acgccgcatg cccgatctcg agctgcgcac agccagcggc
    10261 ccgcagcggg tgttcggcct cctgcatcag ggccggccgg tgctgctcaa tctgggggaa
    10321 cccggaagca tcgatatggc gccgtgggcc gaccgggttc ggctggtcga ggccagctat
    10381 gacggcgcgt gggagctgcc ggtgatcggg gacgtgccgg cgcccacggc ggtggcgatc
    10441 cgtcccgacg gtcatgtcgc ctgggtcggg gacgggactg cgacgggcct cgccgacgcg
    10501 ctgaccaagt ggttcggccc ggcaggcgcg gcgtagcggg cggcggctgt acggagggtg
    10561 cggccaacag cgcggccgcg atacgggcaa cgattgtcgg cgcgcctcgt taggcgttca
    10621 cgatcaattg gagtcttccc atgcgtatgc tctcaacctc gattgctgta ctcgccctcg
    10681 tcggcggact cgcagcgacc gcccccggct tcgccgcgcc cccgaatggc caaggtcagg
    10741 gtcagggcca gggccagggc ggcaatagcc ccatagactg cagcctgccc gccaatgcgc
    10801 agaatccgtt ctgcctgcag caacagaacg ggcagaacgg cgggcagggc aaccaccagt
    10861 tccccaacaa gggcgggaat ggcaacaacc agaacggcca ggggaataac aaccagaacg
    10921 gccagggcaa ttcgaacgac cacaacccac ccccgccgcc accgaacggc atgggccagg
    10981 gcggcgggtc gttcaacttc tcgtcgcacg accgcaacca gttccaccag cggttcaacg
    11041 ggatcaattt cgggttcttc gggattccgg atttcagcat ccggctgggg gtcaccatcc
    11101 cccacagcta tgggctg
//
LOCUS       DATAZA010000245         4100 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1767706, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000245 DATAZA010000000
VERSION     DATAZA010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4100
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1767706"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            173..1171
                     /locus_tag="VHZ56_06270"
     CDS             173..1171
                     /locus_tag="VHZ56_06270"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HEX4297612.1"
                     /translation="MTNSLRGPLLAGLAIGAMALAAPAFAQDEGAKYASPTADCTGVT
                     YDKIGYSPLTMQFDYFQFIESGIKQIADQCKVQVLTADPNNDATKQVSDVESLIAAGA
                     KTVSIYSIDPKAVETAVDAAKAAGVKVLAAVSVFDGADVSVGISDHEFGYQEGLLAGP
                     ILLKDKPGRDSYNVAILNADSLGSNLLDRKKGLTDGLTAAGVKFTVVSDVEAWAEDTA
                     LNATETLLQAHPDVDLILTVNDPGSLGAESAVEAAGNKSTIVMGLGIDKRVLQGVLDG
                     TFPGSVSPAPIETGRALAAVSFALNRGDKVPANVVVPVVTITKDNAQAIMDSLYKK"
     gene            1180..2724
                     /locus_tag="VHZ56_06275"
     CDS             1180..2724
                     /locus_tag="VHZ56_06275"
                     /EC_number="7.5.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HEX4297613.1"
                     /translation="MNDVVDHDASQDGTAGATTPAVTVENIRKRFGGVEALRGVSLSV
                     FPGEIVGLVGHNGAGKSTLVRILHGDLEPDEGEIRLAGNPVKFASIADALRQGLGVVR
                     QELELVPDLSIAENIYLGDEAAFERLGFLDRRRMCVSAAPLLQRVGLAVDPALRLGAL
                     SIGDQQLVAAARALRRAASVLLLDEPTSSLSPHETGRLFEQVRALAQSGIAIIYISHR
                     MDEVAALCHRVVVLRDGQVVGEFADPRRQQHEVISLMAPGNAMATAGAARTRGAPLLE
                     LRQLRTGRNGPTDLTLHAGEILGLFGLVGAGRTTMARTVVGDIRRSSGEIVLKGDRIF
                     PAAPDEAYRLGVAYLSESRKTESIFPGRSVRENIGVRVPQRTARYGFVRPGPFAALAG
                     SMIRRLDIRPADPGKPIELLSGGNQQKAVLARLLVDTLDVFILDEPTHGIDILAKQDL
                     LKVLREVSAQGKAVIFVSSELPELMAVSDRILVLRGGQVVLDADPRVVGEREILGAAA
                     GEQEAA"
     gene            2721..3746
                     /locus_tag="VHZ56_06280"
     CDS             2721..3746
                     /locus_tag="VHZ56_06280"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4297614.1"
                     /translation="MSEGTTMAGQGTDGSAAKPGVMATIGRDFWSRYGVPVALVVMIG
                     LFATQSPAFLTESNIMNILRQSSVLAIAAIGTTIVLICGGIDISMGAIMALSGIIAVV
                     GVQTMGIPDGVSLLLALVAAAFVGYVNGVLAERVRIPAFIATLGTSLVVRGVAFVYTE
                     GRSIGFGRGEAASGAVIQWIGKGFIGSVPVPVVLMIVLYIVGWVVMQRSTWGMHTYAI
                     GSSERAARVAGLRVTRHRVQVYVLAGILSGLAGIILAGRLGSASPSLGNGVEFDILTA
                     VVLGGTSIYGGKGNIGRTLIGALFLSTLTNGLILMNVPTFYQEISQGAVLLLALTLDR
                     IQSRGLR"
     gene            3743..>4100
                     /locus_tag="VHZ56_06285"
     CDS             3743..>4100
                     /locus_tag="VHZ56_06285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297615.1"
                     /translation="MTEIVLDNGALTVRVDLAMGAEITHLLTPDGDNLLFRADWTSPL
                     PAAQSQGYGSQPLDWLSAYRGGWQELFPNAGGGGTVLGTPLPFHGEVSRTTWRADWHV
                     EGRDVTLSSGTRLPLVI"
BASE COUNT          635 a         1470 c         1357 g          638 t
ORIGIN      
        1 ctcgccgcct gccgcagcgg cgacgccgtg gcggcaggtg ccgccgtgcg cgccaacgtc
       61 gcgcagacga ccaaagcaat ttccgaagaa tggcgccgga gctcggcgga ttccaaggaa
      121 tgaccgggct caagcgagtc ccaaacacgc atgtcatcag ggaggtaaca caatgacgaa
      181 ctcactcagg ggcccgcttc tcgccggcct cgccatcggg gccatggccc ttgccgcgcc
      241 ggctttcgcc caggacgaag gggcaaagta tgcgagcccc acggccgact gcaccggcgt
      301 cacctacgac aagatcggct attcgccgct caccatgcag ttcgactact tccagttcat
      361 cgaatccggc atcaagcaga ttgccgacca gtgcaaggtg caggtgctga ccgccgaccc
      421 gaacaacgac gccaccaagc aggtgtcgga cgtggagtcg ctgattgcgg ccggcgccaa
      481 gacggtgtcg atctattcga tcgatcccaa ggccgtggaa accgcggtcg atgccgccaa
      541 ggcggccggc gtgaaagtgc tcgcggcggt gtcggtgttc gacggcgccg acgtctcggt
      601 cggtatctcg gaccatgagt tcggctacca ggaaggcctg ctcgccggtc ccatcctgct
      661 caaggacaag cccggtcgcg acagctacaa cgtcgccatc ctcaacgccg actcgctcgg
      721 ctcgaacctg ctcgatcgca agaagggcct gaccgacggc ctcaccgcgg ccggcgtcaa
      781 gttcaccgtc gtctccgacg tcgaggcctg ggccgaagat accgcgctca acgccaccga
      841 gaccctgctg caggcccatc cggacgtcga cctgatcctc accgtcaacg atccgggctc
      901 gctcggcgcc gaaagcgccg tcgaggccgc cggcaacaag tcgaccatcg tcatgggcct
      961 cggcatcgac aagcgcgtcc tgcagggcgt cctcgacggc accttcccgg gctcggtcag
     1021 cccggccccg atcgaaaccg gccgcgccct tgccgccgtc tccttcgccc tcaaccgcgg
     1081 cgataaggtg cctgccaacg tggtcgtgcc tgtggtcacc atcaccaagg acaacgcgca
     1141 ggccatcatg gactcgctct acaagaagta agcagacgaa tgaacgacgt ggtggaccac
     1201 gacgcatcgc aggacggaac tgccggggcc accaccccgg cagtcaccgt tgaaaacatc
     1261 cgcaagcgct tcggcggtgt cgaagccttg cgcggcgttt cgctgtcggt ctttcccggt
     1321 gagatcgtcg gtctcgtcgg ccacaacggg gccggcaagt cgacgctcgt ccgcatcctg
     1381 cacggcgatc tcgaacccga cgagggcgag atcaggctgg ccggcaatcc ggtgaaattc
     1441 gcctccatcg ccgacgccct ccggcagggg ctcggcgtcg tccgccagga actcgagctg
     1501 gttcccgacc tgagcattgc cgaaaacatc tacctcggcg acgaggccgc cttcgagcgg
     1561 ctcggcttcc tcgaccgccg ccgcatgtgc gtcagcgccg cgccgctgct gcagcgcgtc
     1621 ggcctcgccg tcgatccggc gctgcgcctc ggggcgctgt cgatcggcga ccagcagctg
     1681 gtcgcggcgg cccgggccct gcggcgcgcc gcctcggtgc tgctgctcga cgagccgacc
     1741 tcctcgctca gcccgcacga gacgggccgg ctgttcgagc aggtgcgcgc gctggcgcag
     1801 tccggcatcg ccatcatcta catttcgcac cgcatggacg aggtggccgc gctctgccac
     1861 cgcgtggtgg tgctgcgcga cggccaggtg gtcggcgagt tcgccgatcc caggcgccag
     1921 cagcatgagg tcatcagcct gatggcgccg ggcaacgcca tggcgacagc cggcgcggcc
     1981 cggacgcgcg gcgcgccgct gctcgagctg cggcagttgc gcaccggccg caacgggccg
     2041 accgatctga ccctgcatgc cggcgaaatc ctcggcctct tcggtctcgt cggcgccggc
     2101 cgcaccacga tggcgcgcac cgtcgtcggc gacatccgcc gctcgtcagg cgagatcgtg
     2161 ctcaagggcg accggatttt tccggcagct ccggacgagg cctaccgcct cggcgtcgcc
     2221 tacctgtccg agagccgcaa gaccgagagc atctttcccg gccgcagcgt gcgcgagaac
     2281 atcggcgtgc gggtgccgca gcgcaccgcc cgctacggct tcgtccggcc cgggccgttc
     2341 gcggcgctcg ccggcagcat gatccggcgc ctcgacatcc ggccggccga tcccggcaag
     2401 ccgatcgagc tgctgagcgg cggcaaccag cagaaggccg tgctggcgcg gctgctcgtc
     2461 gatacgctcg acgtgttcat tctcgacgag ccgacgcacg gcatcgacat cctcgccaag
     2521 caggacctgc tcaaggtgct gcgggaggtg agcgcgcagg gcaaggccgt gatcttcgtg
     2581 tcatcggaac tgcccgaact gatggccgtg tccgaccgca tcctggtgct gcggggcggg
     2641 caggtggtgc tcgacgccga cccgcgggtt gtcggcgagc gcgagatcct cggagcggcg
     2701 gccggggaac aggaggcggc atgagcgagg gaacgacgat ggccggacag gggaccgacg
     2761 gcagtgccgc aaagccgggc gtgatggcca ccatcggccg cgatttctgg agccgctacg
     2821 gcgtgccggt cgcgctggtg gtgatgatcg ggctgttcgc gacccagtcc ccggccttcc
     2881 tgaccgaatc caacatcatg aacatcctgc ggcaatcgtc ggtgctggcg atcgcggcca
     2941 tcggcacgac catcgtcctg atctgcggcg gcatcgacat ctcgatgggc gccatcatgg
     3001 cgctgtcggg catcatcgcc gtggtcggcg tgcagaccat gggcatcccc gacggcgtga
     3061 gcctgctgct ggcgctcgtc gccgcggcct tcgtcggcta cgtcaacggc gtcctcgccg
     3121 agcgggtacg catcccggcc ttcatcgcca cgctcggcac cagcctcgtc gtgcgcggtg
     3181 tcgccttcgt ctacaccgaa ggccgctcga tcggcttcgg ccgcggcgag gcagcgtccg
     3241 gcgcggtcat ccagtggatc ggcaagggct tcatcggcag cgtgccggtg ccggtggtcc
     3301 tgatgatcgt cctctacatc gtcggctggg tggtgatgca gcgctcgacc tggggcatgc
     3361 acacctacgc catcggctcg tccgagcgtg cggcgcgcgt cgccggcctg cgcgtcaccc
     3421 gccaccgcgt ccaggtctac gtgctggccg gcatcctgtc gggcctcgcc ggcatcatcc
     3481 tcgccggccg gctgggctcg gcgtcgccca gcctcggcaa cggcgtcgag ttcgatatcc
     3541 tcaccgcggt cgtcctcggt ggcaccagca tctatggcgg caagggcaat atcggacgca
     3601 ccctgattgg cgcgctgttc ctgtcgacgc tcaccaacgg cctgatcctg atgaacgtgc
     3661 cgaccttcta ccaggagatc agccagggcg ccgtgctgct gctggcgctg acgctcgacc
     3721 gcatccagag ccgcggcctc agatgaccga gatcgtcctc gacaacggcg cgctcaccgt
     3781 ccgcgtcgac ctggcgatgg gcgccgagat cacccatctg ctgacgccgg atggcgacaa
     3841 tctgctgttc cgcgccgact ggaccagtcc gctgcctgcg gcgcagagcc agggttacgg
     3901 cagccagccg ctcgactggc tgtcggccta tcgcggcggc tggcaggagc tgttccccaa
     3961 tgccggcggc ggcggcacgg tgctcggcac gccgctgccg ttccatggcg aggtgtcgcg
     4021 cacgacctgg cgcgccgact ggcacgtcga gggccgcgac gtgacgctga gctccggcac
     4081 ccggctgccg ctcgtcatcc
//
LOCUS       DATAZA010000246         3506 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1186968, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000246 DATAZA010000000
VERSION     DATAZA010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3506
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1186968"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..554)
                     /locus_tag="VHZ56_06290"
     CDS             complement(<1..554)
                     /locus_tag="VHZ56_06290"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX4297616.1"
                     /translation="MTSSKLLKPGEPTGTAASNVADELVRMIVGELSPGASLPSEAEL
                     ALKHGVSRVTVREAVKMLAGRGLLELARGRRAVVSEPDSAALGEFMSWIVQHDPKGVF
                     DLIEIRASLEVTSAGLAARRATRPAINAVEANLRNMREAARGGKDGPGGENELSFHRS
                     DVGFHEALAVAGGNRILVSLFEAMG"
     gene            785..1789
                     /locus_tag="VHZ56_06295"
     CDS             785..1789
                     /locus_tag="VHZ56_06295"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX4297617.1"
                     /translation="MTFKMPLALVGALALGLVASSAALATDPVAKWCSGVNIAAFPGG
                     PQGGVFANNVYNGYRQAELDLGPKVTYYFSNWDPNMMITQLQQAIATKVDGIAFMGHP
                     GDDPSDPLIDKAYSEGIVVTSTNTALPKAQSKYGPDGFGYVGAPNYDAGFALGAEAVK
                     RAKLASGDEAFVWGLKGQGGDRAQRTIGVIDALTKAGIKVIYQEIDDATNADPNAGTA
                     TFVGVMKANPGIKLVVTDHGGLTSNVGVYAKADSLKPGQVYFAGFDMSPNTAQAVKSG
                     FQNLVIDQQPYLQGYLPILNICLTKKFGFSGLDVNTAGAFVDASNVDAIAPLAAKEIR
                     "
     gene            1859..2662
                     /locus_tag="VHZ56_06300"
     CDS             1859..2662
                     /locus_tag="VHZ56_06300"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4297618.1"
                     /translation="MAEAARQIQPQAAPETVPVIELRNVSKTFGEVRSLTGVNFKVMP
                     SEIVGLLGDNGAGKSTLVKTVMGFHKPDAGGEIYFKGSRIDDWSVARARGLGIETVYQ
                     ERALCEKQPIWRNMFMGREPRTKWGLLDVKMMKSESARLMSEHMGFTSAAVHPDNIVT
                     TMSGGEKQGVAITRALYFDAELVILDEPTMGLSLTETKKTLDFVNGIKRAGRSAIFID
                     HNIFHVYPVVDRLYVLDRGRVAGVYDKADISMDDLIERLYRVARSGSLE"
     gene            2667..>3506
                     /locus_tag="VHZ56_06305"
     CDS             2667..>3506
                     /locus_tag="VHZ56_06305"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4297619.1"
                     /translation="MATEATPAAKPSSNRISPPSILRRWGSQMGIIGVGLVMWITFVI
                     AAPAVFTNIDIYVAFAETTPVFGIIALALTFVVITGEIDLSFPSTMALGTAIFCLSVT
                     QWGMPWYVGMIFAFLTGIACGLVNGLLVARLNIPSLVITIGTQFLFRGLELVLMNGTG
                     VPLTEDQYPALHILFREPLFGALPIETVWMVVLAVILWLLLNRTRFGAHVFLVGDNPT
                     SARLMGIGVASVKIRTFVLVGVMAVFAGLMVSIYGYYFWPTTGDGYLLTAIASVFLGG
                     TSVF"
BASE COUNT          596 a         1183 c         1124 g          603 t
ORIGIN      
        1 cccatcgcct cgaacagcga gacgaggatg cggttgccgc cggccaccgc cagcgcctcg
       61 tggaagccga cgtcggagcg gtggaacgag agctcgttct cgccgccggg gccgtccttg
      121 ccgccacggg ccgcctcgcg catgttgcgc agattggcct cgacggcatt gatcgcgggg
      181 cgcgtggcgc gccgcgcagc gagcccggcc gacgtcacct ccagcgaggc gcggatctcg
      241 atgagatcga agacgccctt gggatcgtgc tgcacgatcc agctcatgaa ctcgcccagc
      301 gcggcgctgt ccggttcgct gaccacggcg cgacggccgc gcgccagctc gagcaggccg
      361 cggccggcga gcatcttgac cgcctcgcgc accgtgacgc ggctgacgcc gtgcttgagg
      421 gcgagttcgg cttcgctcgg caggctggcg ccgggcgaca gctcgccgac gatcatgcgg
      481 accagctcgt cggcgacgtt ggaggcggcg gtgccggtgg gctcgcccgg cttcagaagc
      541 ttggaacttg tcatatacga tggggccaat ctggtggaaa agcgcaaacg ctgtttcgcg
      601 ccacatggca ccatagcttg gccgtgcccc ccggacaacg gcacgaaacg ggcaaagcgc
      661 agaactcttt tttctcgcag ggctgtgcgt cacctttaca gacatgtcct attcccttag
      721 attttttgag cgcgggagaa gcgcagccgc gggagcggca aacatttggg aggactgcat
      781 gagaatgacg ttcaaaatgc cgctggcatt ggtgggtgcg cttgccctcg gcctggtggc
      841 gagctcggcg gcactggcca ccgatccggt cgccaagtgg tgcagcgggg tcaatatcgc
      901 cgcgttcccg ggcggcccgc agggcggcgt attcgccaac aacgtttaca atggctaccg
      961 ccaggcggag ctcgatctgg gtcccaaggt cacctactac ttctcgaact gggacccgaa
     1021 catgatgatc acccagctcc agcaggcgat cgcgaccaag gtcgacggca tcgccttcat
     1081 gggccatccg ggcgacgatc cgtccgatcc gctgatcgac aaggcgtact ccgagggcat
     1141 cgtcgtcacc tcgaccaaca cggcgctgcc caaggcccag agcaagtatg gccccgacgg
     1201 cttcggctat gtcggtgcgc cgaactatga cgccggcttc gcgctcggcg cggaagcggt
     1261 caagcgcgcc aagctcgcct cgggcgacga agcgttcgtc tggggcctca agggccaggg
     1321 cggcgatcgc gcgcagcgca ccatcggcgt catcgacgcc ctcaccaagg ccggcatcaa
     1381 ggtcatctat caggagatcg acgacgccac caacgccgac ccgaacgccg gcaccgccac
     1441 cttcgtgggc gtgatgaagg ccaacccggg catcaagctg gtggtcaccg accatggcgg
     1501 gctgacctcg aacgtcggcg tctatgccaa ggccgactcg ctcaagcccg ggcaggtcta
     1561 cttcgccggt ttcgacatgt cgcccaacac cgcgcaggcg gtgaagagcg gcttccagaa
     1621 cctggtgatc gaccagcagc cgtacctgca gggctacctg ccgatcctca atatctgcct
     1681 gaccaagaag ttcggtttct ccggcctcga cgtcaacacg gcgggcgcct tcgtcgatgc
     1741 ctccaacgtc gacgcgatcg cgccgctggc ggccaaagaa atccgctagg cagcggccga
     1801 cgacacgatc ggggcgggat ctccgggtcc cgccccgcct tacgtagagg ggagcagaat
     1861 ggccgaggcc gcacgtcaga ttcaaccgca ggccgcgccc gagacggtgc cggtcatcga
     1921 gctcaggaac gtctccaaga ccttcggcga ggtgcgttcg ctgacgggtg tcaacttcaa
     1981 ggtgatgccc agcgagatcg tcggcctgct cggcgacaac ggcgccggca agtcgacgct
     2041 ggtcaagacc gtcatgggct ttcacaagcc cgacgccggt ggggaaatct acttcaaggg
     2101 atcgcgcatc gacgactggt cggttgcccg cgcccgcggg ctcggcatcg agaccgtcta
     2161 tcaggaacgc gccctgtgcg agaagcagcc gatctggcgc aacatgttca tgggccgcga
     2221 gccgcgcacc aaatggggcc tgctcgacgt caagatgatg aagtcggaat cggcgcgcct
     2281 gatgagcgag cacatgggct tcacctcggc ggcggtgcat ccggacaaca tcgtcaccac
     2341 catgtcgggc ggcgagaagc agggcgtcgc catcacccgg gcgctgtatt tcgacgccga
     2401 gctcgtcatc ctcgatgagc cgacgatggg gctgagcctc accgagacca agaagaccct
     2461 cgacttcgtc aacggcatca agcgcgccgg ccggtcggcg atcttcatcg accacaacat
     2521 cttccacgtc tatccggtgg tcgaccggct gtacgtgctc gaccgcgggc gggtcgccgg
     2581 cgtctacgac aaggccgaca tctcgatgga cgatctgatc gagcggcttt accgtgtcgc
     2641 ccgctcaggc tcgctggagt aagcccatgg ccaccgaagc cacgcccgcc gccaagccct
     2701 ccagcaaccg catctcaccg ccgtcgatcc tgcgccgctg gggcagccag atgggcatca
     2761 tcggggtcgg cctggtgatg tggatcacct tcgtgatcgc cgcgccggcg gtgttcacca
     2821 acatcgacat ctacgtggcc ttcgccgaaa ccacgccggt gttcggcatc atcgcgctgg
     2881 cgctgacctt cgtggtcatc accggcgaga tcgacctcag ctttccctcg accatggcgc
     2941 tcggcaccgc catcttctgc ctgtcggtga cgcagtgggg catgccctgg tacgtcggca
     3001 tgatcttcgc cttcctgacc ggcatcgcct gcggcctggt caatggcctg ctcgtcgccc
     3061 ggctgaacat tccctcgctg gtgatcacca ttggaacgca gttcctgttc cgcgggctcg
     3121 agctggtgct gatgaacggc accggcgtgc cgctgaccga ggatcagtac ccggcgctgc
     3181 acatcctgtt ccgcgagccg ctgttcgggg cgctgccgat cgagaccgtg tggatggtgg
     3241 tgctggcggt aatcctctgg ctgctgctca accgtacccg gttcggggcc cacgtcttcc
     3301 tcgtcggcga caatccgacc agcgcccggc tgatgggcat cggcgtcgcc tcggtgaaga
     3361 tccgcacctt cgtgctggtc ggcgtcatgg cggtattcgc cggcctgatg gtgtcgatct
     3421 acggctatta tttctggccg acgaccggcg acggctacct gctcaccgcc atcgcctcgg
     3481 tgttcctcgg tggcacctcg gtgttc
//
LOCUS       DATAZA010000247         1632 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3044045, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000247 DATAZA010000000
VERSION     DATAZA010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1632
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3044045"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..183
                     /locus_tag="VHZ56_06310"
     CDS             <1..183
                     /locus_tag="VHZ56_06310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297620.1"
                     /translation="FVAPDQMDRLATRLAAAGVAHETLLIPYAQHAFDFVPGSFSSQI
                     LEATLRRFLSGGGDAH"
     gene            complement(177..1496)
                     /locus_tag="VHZ56_06315"
     CDS             complement(177..1496)
                     /locus_tag="VHZ56_06315"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX4297621.1"
                     /translation="MGEALVRLYYPVRIVDGGERIPAGKPLVFVLNHPNGLLDPIVLR
                     VALGRPSRFLAKSTLFGNPLGRLAMNAFGSIPVYRAHESGARGQDASRNDESFARCRA
                     ELAAGGVLALFPEGVSHSDPEMRPLKTGAARIALSAEAEADGRLDVMVVPVGLSYEHK
                     TTFRSSVLLVVGEPIAVVPLLPAYRQDERAAVTALTDEIGARLDEVVLQAESRELLAG
                     IARVARWTSDPKSGEDPNDPAVGHRRARGLSAAYARMRARDPVRLETLVSEVRTYWQT
                     LRRLGVRDPWALELTAPRAGALAAAVAKLALAAPLAALGAIMGWIPYRLAGTIAPRVT
                     HDEDLISTVKLFAGASFLFLAWAGEAIAVGCWRGPLWALPVFALGVACGYVALRFEEL
                     LRDGVAGWRAVSLRALHFRTAQRLAERRRALADDVARALDEETAAAQ"
BASE COUNT          266 a          623 c          542 g          201 t
ORIGIN      
        1 ttcgtcgcgc ccgatcagat ggatcggctg gcgacgcggc tcgccgcggc cggcgtcgcg
       61 cacgagactc tcttgatccc ctacgcgcag cacgccttcg acttcgtgcc ggggagcttc
      121 tccagccaga tcctcgaggc gacgctgcgg cgattcttga gcggcggcgg cgacgctcac
      181 tgagcggcgg cggtttcttc gtcgagtgcg cgcgccacgt cgtcggccag cgcgcgacgg
      241 cgctccgcca gccgctgtgc ggtcctgaag tgcaacgcgc gcagcgaaac cgcgcgccag
      301 ccggcgacgc cgtctcgcag cagctcctcg aagcgcagcg ccacgtagcc gcaggcgacg
      361 ccgagcgcaa acaccggcag cgcccagagc gggccgcgcc agcagccgac ggcgatcgcc
      421 tcgcccgccc aggcgagaaa aagaaacgac gcccccgcga acagcttgac cgtgctgatg
      481 agatcttcgt cgtgcgtcac ccgcggcgcg atcgttccgg ccaggcgata cggaatccag
      541 cccatgatcg cccccagcgc cgccagcggc gcagcgagcg ccagcttggc gacggcggcg
      601 gcgagcgcgc cggcccgcgg ggccgtcagc tccagcgccc agggatcgcg cacgccgagg
      661 cgccgcaggg tctgccaata ggtacgcacc tcggacacga gcgtctccag ccgcacggga
      721 tctcgcgccc gcattcgggc ataggcggcc gacagcccgc gtgcccgccg gtggccgacc
      781 gccggatcgt tcggatcttc gccgctcttc ggatcgctgg tccagcgggc cacccgcgcg
      841 atccctgcca agagctcgcg cgattctgcc tgcagcacga cctcgtcgag gcgcgcgccg
      901 atctcgtcgg tcagcgcagt gaccgcggcg cgctcgtcct gccggtaggc tggcaggagc
      961 ggcaccacgg cgatcggctc gcccaccacc agcagcaccg acgaacgaaa cgtcgtcttg
     1021 tgctcgtagc tgagcccgac cggaaccacc atgacgtcga gccgcccgtc ggcctccgcc
     1081 tcggccgaca gcgcgatgcg cgccgcgccc gtcttgagcg gccgcatctc cggatcggag
     1141 tgcgagaccc cctcaggaaa cagcgccagc acgccgcccg cggccagctc cgccctgcag
     1201 cgcgcgaagc tctcgtcgtt gcgagaggcg tcctggccgc gcgcgcccga ctcgtgggcc
     1261 cggtaaaccg ggatgcttcc gaaggcgttc atcgccagcc gaccgagcgg gttgccgaag
     1321 agcgtgctct tggccaaaaa acgcgacggc cgccccagcg ccacccgcag cacgatcgga
     1381 tcgagcagtc cattcgggtg gttgagcacg aacaccagcg gcttgccggc cggaatccgc
     1441 tcgcccccgt cgacgatgcg cacgggatag tagaggcgca ccagcgcctc gcccaaccag
     1501 cgaaccaggg ccgcgagcac gccccgatga tacgtcagcc gccggcgccg tcagagcgag
     1561 agagaagctt tctgaccacc ttccacccgc accggccact aggtggcagg aggcgagcct
     1621 catgaagaac ga
//
LOCUS       DATAZA010000248         4018 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3044161, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000248 DATAZA010000000
VERSION     DATAZA010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4018
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3044161"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..532)
                     /locus_tag="VHZ56_06320"
     CDS             complement(<1..532)
                     /locus_tag="VHZ56_06320"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX4297622.1"
                     /translation="MAERRAGAVTSRRLWFAAAILGSAAVLVGIAGSLFIWFGFFDVS
                     ASSGHSPPVEWLLHFAMERSVAFYAPERAVPDLDDPHVVLRGALHYASGCAPCHAAPG
                     ELASPIARRMTPVPPGLYSAARDFDPSQLFWIVQNGVKMTAMPAWPAPGRDDEIWAMV
                     AFLEQLPTLKTPDYLTL"
     gene            complement(610..1758)
                     /gene="dgoD"
                     /locus_tag="VHZ56_06325"
     CDS             complement(610..1758)
                     /gene="dgoD"
                     /locus_tag="VHZ56_06325"
                     /EC_number="4.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018497475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008869 - galactonate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009063 - amino acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="galactonate dehydratase"
                     /protein_id="HEX4297623.1"
                     /translation="MKIIDVETFLVPPRWLFMKITTDEGLVGWGEPVLEGHARTLAAK
                     IDELRDFLIGRDPMLIEDTWQAIYRNGCYRGGPVLMSAIAGIDMALWDIKGKALGAPV
                     HSLLGGPVRSKIRTYCWIGGDRPHDLVAGALGLREAGFNACKLNVCEELHFVDSYAKV
                     DAIVRQLAELREAVGPSMDLAFDFHGRVHVPMAKVLLREIEPLRPLFVEDAVVSTQID
                     AMADLAKATSIPLVIGERLHSRYDFKRVFETRAASVINPDPAHVGGISETVRIGHMAE
                     AYDVALAPHCPIGPIALAACLQVDAICSNAFIQEQSLGIHYNATGDLGEYLMPGAGFA
                     LEDGFLAIPQGPGLGIEVNEAHVRKQVAIGHDWRAPEWRHDDGSIAEW"
     gene            1950..2501
                     /gene="petA"
                     /locus_tag="VHZ56_06330"
     CDS             1950..2501
                     /gene="petA"
                     /locus_tag="VHZ56_06330"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006937655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEX4297624.1"
                     /translation="MSEISQDEAPPQPSRRDFLYIAAGAVGVVGVGAAIWPLIDQLNP
                     DASVLALTSVDFNLSSLQLGQVVTVKWRGQPVFVRYRTPEDIKAMQAVPLSDLKDPAP
                     DSARVKKGHEQYLVQIGICTHLGCVPIFNAGAYKDGWGCPCHGSQYDAAGRIRSGPAP
                     LNLVLPPYKFVTDSQITIGVADT"
     gene            2694..>4018
                     /locus_tag="VHZ56_06335"
     CDS             2694..>4018
                     /locus_tag="VHZ56_06335"
                     /inference="COORDINATES: protein motif:HMM:NF012861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEX4297625.1"
                     /translation="MLVLASACGLLAALVVAFVGWATSELHTLLFALPAHSRLSEQTA
                     FSSPYFALVPVAGGVLVGVSIFLARRFRTRPPVDPIEANAVYGGKMSFRESVIVTLQT
                     ILSSSFGASVGLEAAYTQMGSSLASYVGSRLNLRRNEVRTLVGCGAAGAIAAAFNAPF
                     TGAFYGFELIIGLYSVGLLAPVVAASLVASFTARWLGAVQTPIVLTGIKTLSGTDVVP
                     FLILGVISSGVAIAIMLAVAQFDRVFSLTRLPSYARPLIGGVAIGGMALLTPQVLSSG
                     HGALDFQLTAGFGLGGVAVLFVLKFLASAVSLGAGFRGGMFFASLLLGALLGKLYAGV
                     LIATGLLPGVDVLLAAVVGMASLASGVIGGPLTMTFLVLETTGDLTISAAVLVAATIS
                     NFIVRELFGFSFSTWRFHLRGQTIRSPHDVGRVRNLTVGSMMRADIRVVS"
BASE COUNT          605 a         1400 c         1294 g          719 t
ORIGIN      
        1 cgagcgtcaa atagtctggg gttttcagcg tcggcaactg ctcgaggaag gccaccatcg
       61 cccagatctc gtcgtcgcgg ccaggcgctg gccatgccgg catcgccgtc atcttgacgc
      121 cgttctggac gatccagaac agctggctgg gatcgaaatc gcgcgctgcc gagtacagcc
      181 ccggcggcac cggcgtcatc cgccgggcga tcggcgacgc cagctcaccc ggggcggcgt
      241 ggcagggcgc gcagccgctc gcatagtgaa gggcgccgcg caggaccacg tgcggatcgt
      301 cgaggtcggg gacggcccgt tccggcgcat aaaaggccac cgagcgctcc atcgcaaagt
      361 ggagcagcca ctcgaccggg ggcgaatgtc cgctgctcgc cgaaacatcg aagaatccga
      421 accagatgaa cagtgaaccg gcgatcccca ccaggaccgc ggcactgcca aggatggctg
      481 cggcgaacca cagccgtcgc gatgtgaccg cccctgcgcg acgctcggcc aaggcttcga
      541 cgctccgatg caaacaaggc tacaaccccg cgtgcgggcc ttaggttgcc ttgcgccgtc
      601 ggcaggtcgt caccattcgg cgatggagcc gtcgtcatgg cgccactcgg gggcgcgcca
      661 gtcgtgaccg attgccacct gcttgcggac atgcgcctcg ttgacctcga tgccgaggcc
      721 gggcccctgc gggatcgcaa ggaagccgtc ctctagcgca aaaccagcgc ctggcatcag
      781 gtattcgccg agatcgccgg tggcgttgta gtggataccc aggctctgct cctggatgaa
      841 ggcattggag cagatcgcat ccacctggag gcaggcggcg agcgcgatcg gcccgatcgg
      901 gcaatgcggc gccagcgcca cgtcataggc ctcggccata tgcccgatgc ggaccgtctc
      961 ggaaatgccg ccgacatgcg ccgggtcggg gttgatgacc gaggcggcgc gggtttcgaa
     1021 cacccgcttg aaatcgtagc ggctgtgcag ccgctcgccg atcaccagcg ggatcgacgt
     1081 cgccttcgcg aggtccgcca tcgcatcgat ctgggtcgag accaccgcgt cctcgacgaa
     1141 cagcgggcgc agcggttcga tttccctgag cagcaccttg gccatcggca cgtgcacgcg
     1201 gccgtggaag tcgaaggcca ggtccatgct gggaccgacc gcctcgcgca gctcggccag
     1261 ctgccggacg atggcatcga ccttggcata gctgtcgacg aagtgcagtt cctcgcagac
     1321 attgagcttg caggcattga agccggcttc gcgcagtccc agggcgccgg cgacgagatc
     1381 gtgcggccgg tcgccgccga tccagcaata ggtgcggatc ttgctgcgca ccggtccgcc
     1441 gagcaggctg tgcaccggcg cgccgagcgc cttgcccttg atgtcccaca gcgccatgtc
     1501 gatgccggcg atggcgctca tcagcaccgg cccgccgcga tagcagccat tgcggtagat
     1561 cgcctgccag gtgtcctcga tcagcatcgg atcgcgcccg atcaggaagt cgcgcaactc
     1621 gtcgatcttg gccgccagcg tccgggcatg tccctcgagc accggctcgc cccagccgac
     1681 gagaccctcg tcggtggtga tcttcatgaa cagccagcgc ggcggaacga ggaaagtctc
     1741 gacgtcgatg atcttcatct gggggtatcc gagctggccg tcgcgatggc ggagcgccgg
     1801 cagttgatcg caaacatgct gcaactggtc aacactctgc tgacggacga tggccggctc
     1861 ctccccgccc gcggccaatc gcgagaactt gcgcggcgcg gtaagtcgga ggcgcctatg
     1921 gttgctggtg tccagccccg gaggaaaccg tgtcggaaat ctctcaggac gaagcgccgc
     1981 cgcagccgtc gcgccgcgac ttcctctata tcgccgctgg agcggtcggg gtggtgggcg
     2041 tcggcgcagc catctggccg ctgatcgacc agctcaatcc cgatgcctcg gtgctggccc
     2101 tgacgtccgt cgacttcaat ctctcctcgc tgcagctggg acaggtggtg accgtcaaat
     2161 ggcgcggcca gccggttttc gtccgctatc gcacgcccga agacatcaag gcgatgcagg
     2221 ccgtgccgct ttccgacctc aaggacccgg cgccggactc cgcccgggtc aagaaggggc
     2281 acgagcaata tctggtgcag atcggcatct gcacccattt gggctgcgtt ccgatcttca
     2341 acgccggagc ctacaaggac ggctggggct gcccgtgcca cggctcccag tatgacgccg
     2401 ccggccgcat ccgctcggga ccggcgccgc tcaacctggt tcttcccccg tacaaattcg
     2461 tgaccgacag ccagatcacc atcggggtgg cagacacctg atcctgcaca tcggacggcc
     2521 gctttccggc gccgccatac ttcctttaag ttgaggagag aaagtgagcg cattccttcc
     2581 tctcccggca ccccgctgtc cccctcatgt ccgacttcgc catcacggcc acccgacccg
     2641 cgcctactct cgccgccctc gtcgcccgac tgagccgctg gcgtggcgtg ttgatgctgg
     2701 tcctggccag cgcctgcggt ctgctggcgg ccctcgtggt ggcgttcgtc ggctgggcga
     2761 cgagcgaact gcatacgctt ctgttcgcac tgccggccca tagccgtctt agcgaacaga
     2821 ctgccttctc ctcaccctat ttcgcgctgg tcccggttgc cggcggcgtg ctggtcgggg
     2881 tcagcatctt cctcgcccgc cggttccgga cccggccgcc ggtcgatccg atcgaggcca
     2941 atgccgtcta cggcggcaag atgtcgtttc gcgagagcgt catcgtcacc ctgcagacca
     3001 tcctgtcgag cagcttcggg gcttccgtcg gcctcgaggc ggcctacacg cagatggggt
     3061 cctcgctcgc atcgtatgtc ggctcgcgcc tcaacctccg ccgcaacgaa gtgcgcacgc
     3121 tcgtcgggtg cggcgctgcg ggcgccatcg cggcagcgtt caacgcgccg ttcaccggtg
     3181 ccttctatgg cttcgagctg atcatcgggc tctattccgt cggcctgctg gcgccggtgg
     3241 tcgcggcctc gctcgtcgcc agcttcaccg ctcgctggct gggcgccgtg cagacgccga
     3301 tcgtcctcac cggcatcaag accctctcgg gaaccgacgt ggtgccgttc ctgatcctcg
     3361 gcgtcatcag cagcggcgtc gccatcgcca tcatgctggc ggtggcccag ttcgaccgcg
     3421 tgttctcgtt gacgcgcctg ccgtcctacg cccgtccgtt gatcggcggg gttgccatag
     3481 gcggcatggc gctgctgacc ccacaggtgc tctcgagcgg ccacggagcc ctcgacttcc
     3541 agctgaccgc gggctttggc ctgggcggcg tggcggtgct cttcgtcctg aagttcctcg
     3601 cgtccgcagt ctcgctcggg gccggattcc gcggcggaat gttctttgcc tcgctgctgc
     3661 tgggcgccct gctcggcaag ctctacgccg gtgtattgat cgccactggc ctgcttcccg
     3721 gcgtcgacgt cctgctggcc gcggtcgtcg gcatggcctc gctggcgagt ggcgtcatcg
     3781 gcggcccgct gacgatgacg ttcctggtgc tggaaacgac cggcgacctg acgatcagcg
     3841 ccgccgtgct ggtcgcggcg acgatctcca atttcattgt ccgcgaactc ttcggcttct
     3901 cgttctcgac ctggcgcttt cacctgcgcg gccagaccat ccgctcgccc cacgacgtcg
     3961 gtcgcgtgcg caacctgacg gtgggctcga tgatgcgggc cgacatccgt gtggtctc
//
LOCUS       DATAZA010000249         4486 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_26560, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000249 DATAZA010000000
VERSION     DATAZA010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4486
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26560"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..162
                     /locus_tag="VHZ56_06340"
     CDS             <1..162
                     /locus_tag="VHZ56_06340"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013948295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX4297626.1"
                     /translation="AHLATTTVNKGDVVSRGDTIGTVGMTGSVTRPQLHFELRQGATP
                     VDPIPMLAG"
     gene            complement(213..1082)
                     /locus_tag="VHZ56_06345"
     CDS             complement(213..1082)
                     /locus_tag="VHZ56_06345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4297627.1"
                     /translation="MPDDTLTQIAAALERIAARLDAMGPVPQSDAAAIGDVDAYHWDA
                     VAARLLPVPRVARVPFGLLKGIDAVRDTLLANTLQFARGYAANNALLWGARGMGKSSL
                     VKAVHAEVAAHNDGRLILVEISREDIDTLPRLMRLIAAEPARFIVFCDDLSFDKDETS
                     YKSLKAILDGGLEGRPDNVLFYATSNRRHMMPREMIDNERATAINPGEAIEEKVSLSD
                     RFGLWLGFHNCDQPTYLSMIRGYCDAYGLAIDDAALDARAIEWAQTRGARSGRVAIQF
                     VRNLAGEMGKAID"
     gene            1270..1626
                     /gene="yajC"
                     /locus_tag="VHZ56_06350"
     CDS             1270..1626
                     /gene="yajC"
                     /locus_tag="VHZ56_06350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020184710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEX4297628.1"
                     /translation="MFVTAALAQSTGTPAATGTGGVSDLLIQFAPILLLVVIFWFLIF
                     RPQQKRAKAQQAMLSAISRGDTVVTTGGIVGKVTKAVDGEDLEVEIAQGTRVKLVRGM
                     ITDVRSRANPVNDNKA"
     gene            1652..4213
                     /gene="secD"
                     /locus_tag="VHZ56_06355"
     CDS             1652..4213
                     /gene="secD"
                     /locus_tag="VHZ56_06355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEX4297629.1"
                     /translation="MLQFSPLRTAIILIVAVLGIAFAVPNFFPKEVTANWPGWLPHQA
                     MTLGLDLQGGSHLLLQVDRQSVIDDRLKTLRRDARQILAGENGIGNIITTDAQGISIE
                     LTDPTQKAAAETALQKLQTGNGVLGIGGTPELAFSDTPDGKISVQLTDAGLNDRMSSL
                     IAQSIEVIRKRIDQVGTTEPTIQRDGADRVLVEVPGFNNSDRLKELISKTARLEFHLV
                     HPTMTAAQAQSQGTPAGYEIVPSSEASGSSELLNENVELGGEDLTNAQAGFDQQTGRS
                     VVNFTFNTHGAIVFGQITSANVGKRFAIVLDNQVITAPTIQQPITGGSGQISGNFTPA
                     SANDLAVLLRAGALPATLDVAEERSVGPSLGADSIKAGVTSGAVAAVLVVAFMVVAYG
                     LFGLFADISLVLNIVLIVGALSLLGSTLTLPGIAGMVLTLGMAVDANVLIYERIREEL
                     NAGKSILAAIDAGFKRAWGTIIDSHLTQLIAAIVLYFLGSGPVQGFAVTLGLGILTSL
                     FTAYTVTLYFVGLWFRVRRPKKIRIQHFRFIPDGTKIPFMRISRYAIIFSIVISVLAI
                     GSAVTRGFNLGIDFVGGSAVAVQYDGDGPADIGHIRGVLDKLALGEIEVQTFGTDKDL
                     LVRIEQQPGGDKAQQDALLKVHDALATEKYEIRSTETVGPQVSSELARNGVIAVLVAL
                     VAILIYVWFRFEWQFALAAITTTSHDVIMTIGLFSIARIEFDISSIAAVLTLVGLSLN
                     ETVVISDRVRENLRKYKKMSLHELIDLSINQTIVRTSLTQFTILLALFPLVFFGGESI
                     RGFTIAMTFGSIFGMYSSVFIGGPILIYFGLKARGETPAAAKAAKIPKRADGAAV"
     gene            4223..>4486
                     /locus_tag="VHZ56_06360"
     CDS             4223..>4486
                     /locus_tag="VHZ56_06360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MTH938/NDUFAF3 family protein"
                     /protein_id="HEX4297630.1"
                     /translation="MAEPGQGFYPYQAPIEGYGNGGFRFAEMSHRGSLLCLPSGMHAW
                     PVNAPAEITRANLQLVFDAADAIDVLLVGLGADVAGFDKALRQA"
BASE COUNT          743 a         1485 c         1493 g          765 t
ORIGIN      
        1 gcccacctcg cgaccacgac cgtcaacaag ggtgacgtgg tgagccgggg cgacaccatc
       61 ggcacggtcg gcatgaccgg ctcggtgacc cgcccgcagc tccacttcga gctccgccag
      121 ggggcgacac cggtcgaccc gatcccgatg ctcgcgggct gaacagcgca gccacgacac
      181 tcaggggccc gccgggagcg ggccctttgc gttcagtcga ttgccttgcc catttcgccg
      241 gccaggttac ggacgaactg gatggcgacg cggccggaac gggcgccgcg ggtctgcgcc
      301 cattcgatgg cgcgggcatc gagcgcggcg tcgtcgatcg ccagcccgta ggcgtcgcaa
      361 tagccgcgga tcatgctcag ataggtcggc tggtcgcagt tgtggaagcc gagccagagc
      421 ccgaagcggt cggagagcga aactttctcc tcgatggcct cgccggggtt gatggcggtg
      481 gcgcgctcgt tgtcgatcat ctcgcgcggc atcatgtggc ggcggttcga ggtggcatag
      541 aacaacacat tgtccggccg gccctcgagt ccgccgtcga ggatggcctt gagcgatttg
      601 tagctggtct cgtccttgtc gaagctcagg tcgtcgcaga acacgatgaa gcgggccggt
      661 tcggcggcga tgagccgcat cagccgcggc agcgtgtcga tgtcctcgcg ggaaatctcg
      721 acgaggatca ggcggccgtc gttgtgggcg gcgacctcgg cgtggacggc cttcaccagc
      781 gaactcttgc ccatgccgcg agcgccccag agcagggcat tgttggcggc gtagccccgc
      841 gcgaactgca gggtgttggc gagcagcgtg tcgcgcaccg catcgatgcc cttgagcagg
      901 ccgaagggca cgcgggcgac gcgcggcacc ggcaggagcc gggccgcaac ggcgtcccaa
      961 tggtaggcat cgacgtcgcc gatggccgcg gcatcggact gcggcacagg acccatggca
     1021 tcgaggcgcg ccgcgatgcg ctccagcgcc gcggcgatct gcgtcagggt gtcgtcgggc
     1081 atgctcgggg aaatcctgcg tcgatatggc tgtgaggtgg ccggatcgaa gcgctttgca
     1141 atcggggaag gccggctata tagtccgcgc gcttttgccc gggtggattg ttccattgcc
     1201 ggaaacgcag cctatatgcg atcaacagcg gcgttttgac aagccgacag cccactcaag
     1261 gagatcttca tgttcgtgac cgccgctctc gcgcagagca ccggtacccc tgccgcaacc
     1321 ggaaccggcg gggtgagcga cctgctgatc cagttcgccc cgatcctgct cctcgtggtg
     1381 atcttctggt tcctgatctt ccggccgcag cagaagcgcg ccaaggcgca gcaggccatg
     1441 ctttcggcga tttcgcgtgg tgacacggtg gtgacgaccg gcggcatcgt cggcaaggtc
     1501 accaaggcgg tcgacggcga agacctggag gtcgagatcg cccaggggac gcgcgtcaag
     1561 ctggtgcgcg gcatgatcac ggacgtgcgc tcgcgcgcca atccggtgaa cgacaacaag
     1621 gcctgagggc cgccaaggac gatattccag tatgctgcag ttctcgccgc tccgcaccgc
     1681 gatcatcctt atcgtcgccg tgctgggtat cgccttcgcc gtcccgaatt tcttccccaa
     1741 ggaagtcacc gccaactggc cgggctggct gccgcaccag gcgatgacgc tcggcctcga
     1801 cctgcagggc ggctcgcacc tgctgctgca ggtcgaccgg cagtcggtga tcgacgaccg
     1861 gctgaagacg ctgcgccgcg acgcgcggca gatcctcgcc ggcgagaacg gcatcggcaa
     1921 catcatcacc accgatgcgc agggcatcag catcgaactc accgacccga cacagaaggc
     1981 cgcggcggag acggccctgc agaagctgca gacaggcaat ggcgtgctcg gcatcggcgg
     2041 aacgcccgag ctggcgttca gcgatacgcc ggacggcaag atctcggtgc agctcaccga
     2101 cgccggcctc aacgaccgca tgtcgtcgct gatcgcgcag tcgatcgaag tcatccgcaa
     2161 gcgcatcgac caggtcggca ccaccgagcc gacgatccag cgcgacggtg ccgatcgcgt
     2221 gctggtcgag gtgccgggct tcaacaattc cgaccggctc aaggagctga tcagcaagac
     2281 cgcgcggctc gagttccacc tcgtgcaccc gaccatgacg gcggcgcagg cgcagtcgca
     2341 gggcacgccg gccggctatg agatcgtgcc gagctctgaa gccagcggca gttccgagct
     2401 gctcaacgag aacgtcgagc tcggcggcga agacctgacc aacgcccagg ccggctttga
     2461 ccagcagacc ggccggtcgg tcgtcaactt caccttcaac acccacggcg ccatcgtctt
     2521 cgggcagatc accagcgcca atgtcggcaa gcgctttgcc atcgtgctcg acaaccaggt
     2581 gatcaccgcg ccgacgatcc agcagccgat caccggcggc tcgggccaga tttccggcaa
     2641 tttcacgccg gcctcggcca acgacctggc agtgctgctg cgggccggcg cgctgccggc
     2701 gacgctcgac gtggccgagg agcgttcggt gggacccagc ctgggcgccg attcgatcaa
     2761 ggcgggcgtc acgtccggcg cggtcgcggc ggtgctcgtg gtggccttca tggtcgtggc
     2821 ctacgggctg ttcgggctgt tcgccgacat ctcgctggtc ctcaacatcg tgctgatcgt
     2881 cggggccctg tcgctgctcg gctcgacgct gacgcttccc ggcatcgccg gcatggtgct
     2941 gacgctcggc atggcggtcg atgcgaacgt gctgatctac gagcgcatcc gcgaggaact
     3001 gaatgccggc aagtcgatcc tcgcggcgat cgatgccggc ttcaagcgcg cctggggcac
     3061 gatcatcgat tcgcatctga cgcagctgat cgccgccatc gtgctgtatt tcctcggttc
     3121 gggtccggtg cagggttttg cggtcacgct cggactcggc atcctgacgt cgctgttcac
     3181 ggcctacacc gtgacgctct acttcgtcgg gctgtggttc cgcgtccggc ggccgaagaa
     3241 gatccggatc cagcatttcc gcttcatccc ggatggcacc aagatcccgt tcatgcggat
     3301 ttcgcgctac gcgatcatct tctcgatcgt gatttccgta ctcgccatcg gctcggcggt
     3361 gacccgcggc ttcaacctcg gcatcgactt cgtcggcggt tcggccgtcg cggtgcagta
     3421 cgacggcgac gggccggccg atatcggcca tatccgcggc gttctcgaca agctggcgct
     3481 cggcgagatc gaggtgcaga ccttcggtac cgacaaggac ctgctggtcc gcatcgagca
     3541 gcagccgggc ggcgacaagg cccagcagga tgcgctgctc aaggtgcacg acgcgctggc
     3601 caccgagaaa tacgagatcc gcagcaccga gaccgtcggc ccgcaggttt cgagcgagct
     3661 ggcgcgcaac ggcgtcatcg ccgtgctggt agcgctggtg gcgatcctga tctacgtgtg
     3721 gttccgcttc gagtggcagt tcgcgctcgc cgccatcacc acgacgtcgc acgacgtcat
     3781 catgaccatc gggctgttct cgatcgcccg catcgagttc gacatatcct cgatcgcggc
     3841 agtgctgact ctggtcggcc tcagtctcaa cgagaccgtg gtcatttccg accgcgttcg
     3901 agaaaacctg cgaaaataca agaagatgtc gctgcacgaa ctgatcgacc tgtcgatcaa
     3961 ccagaccatc gtgcgcacgt cgctgacgca gttcaccatc ctcctggcgc tgttcccgct
     4021 ggtgttcttc ggcggcgagt cgatccgcgg cttcaccatc gccatgacgt tcgggtcgat
     4081 cttcggcatg tactcgtcgg tgttcatcgg cggcccgatc ctcatctatt tcgggctcaa
     4141 ggcgcgcggc gaaactccgg cagccgcgaa ggctgcaaag atcccgaagc gcgccgacgg
     4201 ggcggcggtc taggagcgcc cgatggcgga gccggggcag ggcttctacc cgtaccaggc
     4261 gccgatcgag ggctacggca atggcggctt tcgctttgcc gagatgagcc atcgcggctc
     4321 gctgctgtgc ctgccgtcgg gcatgcacgc ctggccggtc aacgcgccgg cggagatcac
     4381 gcgggccaac ctgcaactgg tgttcgacgc ggccgacgcg atcgacgtcc tgctggtcgg
     4441 gctgggcgcc gacgtcgccg gcttcgacaa ggcgctgcgg caggcg
//
LOCUS       DATAZA010000250         6349 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2463981, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000250 DATAZA010000000
VERSION     DATAZA010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6349
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2463981"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1486
                     /locus_tag="VHZ56_06365"
     CDS             <1..1486
                     /locus_tag="VHZ56_06365"
                     /inference="COORDINATES: protein motif:HMM:NF015737.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HEX4297631.1"
                     /translation="NGLISLIDNGVGDSLWIDHNFQGQADHSFIGLDVNFAAATPENP
                     NGNFWGSPPDTWRSDRFMLGETHSEDVADGSTGLIIHKTGSGSDTVGDTILVGNVANV
                     GVSPNSEDGGCVGDACKDGDTFYIASASQGYLDVGGIGAVQDGMYAWYLTQQQNTGED
                     GGSNFVLESDWSPQSQSLGGLLTAGQILWYDTSEAPLNHGGTGPSGADLGAGQTPAPA
                     SGVSAWAKAVGSYFSRTSSATTGAPPVTFDTSLVQDTFGLLAGADVNPGDTSGIRGGA
                     FGGLIGSSMTLGFGASATYMGGTAGLYASYVPDTTSGVFVDGEVKADLLGVSYSAPGA
                     FSATGTMTSVGVTGDAGYKVDAGNNMYVAPVASLSLVDTMLSGFSAGGGTASFSNGLS
                     IRPGIGIEVGTTVAAGDGMSADLSVSAKLVDELGAANTVTLSDGVNPPTSFGDSITGP
                     FAELSANGTLYTSDPTLQVFGSSGLKTNGSFVDVNAKVGVKKSF"
     gene            complement(1552..2571)
                     /locus_tag="VHZ56_06370"
     CDS             complement(1552..2571)
                     /locus_tag="VHZ56_06370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297632.1"
                     /translation="MATTATRRKPAASAPALRRSRVSRHLVLVNQAGWQDPADLYQIA
                     AKVRWLDPTVGTFIAPSEIDDGVTRDAAATLPSLVVSFGPLGKFQPARGKVYHGGPVN
                     KFEQLRRLAAAGVPVPRTTLLGPQTTLDLKVWGELVIVKPTDLRSSSGGSGIQLRRTA
                     DVRYIAPEDYPEGHPGRLGPMLVQQFIDTGERFSLFRVLTLFGRPLYCNITVSHNSRP
                     QLSADDATLATAQIATNALPNDERDKILVFDADAFAIAEAAYRAIPEAPLQGCDIIRD
                     VRTGRSYVLEVNPGGNTWAFSSAFVAEMRRMDGPALDKARLAQLDAFSSAAHVLLQKV
                     RAEAE"
     gene            complement(2624..3634)
                     /locus_tag="VHZ56_06375"
     CDS             complement(2624..3634)
                     /locus_tag="VHZ56_06375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297633.1"
                     /translation="MATAATLEPAAPAVRRSPVTRHLVLVNRRGWQAPDDLYRIAAKV
                     RWLDPTIGTFVVAGDLDDGVTRDAAAALPSLVVSFGPLGRFQPARGRVYQGQQIHKFD
                     QLRRLSAAGVPVPMTAMLGPDTVLDPQRWGEFVVLKPTDLGSSSHGSGIQLIRTARVK
                     YRPPEDYPEGHPGRVAPMLVQQFISMDGHLGGFRVLSFFGEPLYCIKNGTVSRKVDLS
                     AGDDIIEDSPIAMQSLDSADRTRAFVYDADVIETARAAYRAVPEAPLQGCDVMRDHRT
                     GRVYVLELNPGGNTWHFSSDYNAEARAKETPETTLNRYAQFDAFNTAAYILAARVRAE
                     AE"
     gene            complement(3687..4718)
                     /locus_tag="VHZ56_06380"
     CDS             complement(3687..4718)
                     /locus_tag="VHZ56_06380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297634.1"
                     /translation="MDAPATEPPAAPAPSPAPAAHRGPQVERHLVLVNRRGWQDPNDL
                     YHIAAKVRWLDPTIGTFVVPGDLDDGVTRDAAASLPSLVVSFGPLGKFQPARGRVYQG
                     RPIQKFEQLKRLDAAGIPVPMTMMLGPDTALDPQRWGEFVIVKPTDIASSSHGSGIQL
                     MRTGRVRYIAPQDYPEGHPGRQGPMVVQQFIDTGSPLSAFRVMTLFDEPLICQRATAM
                     TGRPPLSSDDAVLEAAIVTTQGHPNAQKRKDLVYDADVIALARKASRVIPEIPLKGCD
                     ILRDRRTGRVYVLELNPGGNTWHFSSDFMASARAEDPPELSRQRLAQFDAFASAAHIL
                     VDRVRAEAE"
     gene            4844..5359
                     /locus_tag="VHZ56_06385"
     CDS             4844..5359
                     /locus_tag="VHZ56_06385"
                     /inference="COORDINATES: protein motif:HMM:NF018482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HEX4297635.1"
                     /translation="MQLPKLLALAGVLAATQGALGQEVVLGGGDNAAPQASSNWATRC
                     VATSRQDGSDCTIDERAVQQSTGQLVGSVTVRVPGPGKPPLILVTAPLGLYIPAGVSV
                     DIDGAGAQKIDIQTCDRGGCYASGTLSDALLSAMRAGKTLDIVIQDVGKQTVKLPIPL
                     AGFPAAYDKIK"
     gene            5431..6096
                     /locus_tag="VHZ56_06390"
     CDS             5431..6096
                     /locus_tag="VHZ56_06390"
                     /inference="COORDINATES: protein motif:HMM:NF018482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HEX4297636.1"
                     /translation="MPPAAKPRRHLLGTMQVVFIALAVAIAAAAAVIYVLSGNAAWLL
                     ERGSPAPAKPVASAASAASLAPAVAANGASEAPAPPKVTTETFGDWIVACPVGQTDPA
                     ACVAQQQLVSSTGAAVLVWSIQRDAGGTLHAVWRVPTGVLLNRGLSIDLGDGKPSAIP
                     FSACDSRSCAARAVIAPDYLQKLEAATQISTTVTVEATGKAFGFHLSAKGLSDALAKL
                     AAH"
     gene            complement(6177..6252)
                     /locus_tag="VHZ56_06395"
     tRNA            complement(6177..6252)
                     /locus_tag="VHZ56_06395"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6217..6219),aa:Asn,seq:gtt)
BASE COUNT          995 a         2045 c         2344 g          965 t
ORIGIN      
        1 aaacggcctc atcagcctga tcgacaacgg cgttggcgac tcgctgtgga tcgaccacaa
       61 tttccagggc caggccgacc acagcttcat cggactcgac gtgaacttcg cggcggcgac
      121 gccggagaat ccgaacggta acttctgggg gagccctccc gatacctggc ggtcggatcg
      181 gttcatgctc ggggagaccc acagcgaaga cgtggccgac ggctccaccg ggctgatcat
      241 ccacaagacc ggcagcggca gcgacacggt cggcgatacg atcctcgtgg gcaatgtcgc
      301 gaacgttggc gtgtcgccga attcggaaga tggcggatgc gtcggcgacg cctgcaagga
      361 cggcgacacg ttctacatcg cgtcggcgtc gcagggttac ctggatgtgg gcggcatcgg
      421 tgccgtgcag gacggcatgt atgcgtggta cctcacgcag cagcaaaaca ccggcgagga
      481 tggcggcagc aacttcgtgc tcgagagcga ctggtcgccg cagtcgcagt cgctcggcgg
      541 cctcctcacc gctggccaga tcctctggta cgacaccagc gaggcgccgc tgaaccatgg
      601 cggaaccggc ccgagcggcg cagatctcgg ggccgggcag accccggcgc cggcgagcgg
      661 cgtctcggcc tgggccaagg ccgtgggcag ctacttcagc cgcaccagct cggcgacgac
      721 gggagccccg ccggtgacct tcgacaccag cctcgtgcag gacaccttcg ggctgctggc
      781 gggtgccgat gtcaatccgg gcgataccag cggcatccgc ggcggggcgt tcggcggcct
      841 gatcggttcg tcgatgacgc tcggcttcgg cgcctcggcc acctacatgg gcggcacggc
      901 gggcctctac gcgtcgtacg tgccggacac cacctcgggc gtcttcgtcg acggcgaggt
      961 gaaggcggac ctcctgggcg tcagctactc ggcaccggga gccttctcgg ccaccggcac
     1021 gatgaccagc gtcggcgtca ccggcgatgc cggctacaag gtcgacgccg gcaacaacat
     1081 gtacgtcgcc ccggtggcgt cgctgtccct cgtcgatacg atgctgagcg ggttctcggc
     1141 gggtggcggc acggccagct tcagcaacgg gctgagcatc cggccgggca tcggcatcga
     1201 agtgggcacc acggtggcgg ccggcgacgg catgagcgcc gacctgtcgg tcagcgccaa
     1261 gctggtcgac gaactcgggg cggccaatac ggttacgctg agcgatggcg tcaacccgcc
     1321 gaccagtttt ggcgacagca tcaccgggcc gttcgccgag ctgagcgcca acggtacgct
     1381 ctacacgtcc gacccgaccc tgcaggtgtt cggttcgagc ggcctcaaga ccaacggcag
     1441 cttcgtcgac gtcaacgcca aggtcggcgt caagaagtcg ttctaggctc gaccgcagac
     1501 actcaagcgg ggccggtcca tgcgaccggc cctttgcttc ggcgataggg cctattccgc
     1561 ttcggcgcgg accttctgca gcagcacgtg agcagcgctg gagaaggcgt cgagctgcgc
     1621 cagcctggcc ttgtcgagcg ccggcccgtc catccggcgc atttcggcga caaacgccga
     1681 ggagaaggcc caggtgttgc cgcccggatt gacctccagc acatagctgc ggccggtgcg
     1741 aacgtcgcgg atgatgtcgc atccctgcag cggggcttcg gggatggccc tgtaagccgc
     1801 ctcggcgatt gcaaacgcgt ccgcgtcgaa aaccaggatc ttgtcgcgct cgtcattggg
     1861 cagggcgttg gtcgcgatct gggcggtggc cagggtcgcg tcgtcggcgc tcaactgcgg
     1921 ccggctgttg tggctgacgg tgatgttgca atagagcggc cggccgaaca gcgtcagcac
     1981 gcggaacagc gagaaacgct cgccggtgtc gatgaactgc tgcaccagca tggggccgag
     2041 gcgtccgggg tggccttcgg gatagtcctc gggcgcgatg tagcggacgt ccgccgtgcg
     2101 ccgcagctgg atgccggagc cgccggacga ggaccggagg tcggtcggct tgacgatgac
     2161 gagctcgccc cagactttca ggtcgagcgt ggtctgcggc ccgagcaggg tggtgcgggg
     2221 caccggtacg ccggcggcgg cgagccggcg cagctgctcg aatttgttga ccgggccgcc
     2281 atgatagacc ttgccgcgcg ccggctggaa tttgcccagc ggcccgaacg agacgaccag
     2341 cgagggcagc gtggcggcgg catcgcgggt caccccgtca tcgatctcgc tcggggcgat
     2401 gaaggtgccg acggtcggat cgagccagcg caccttggcg gcaatctggt agaggtcggc
     2461 gggatcctgc cagccggcct ggttgaccag caccagatgg cggctcaccc gcgaccggcg
     2521 cagtgcggga gcggaagcgg caggcttgcg gcgggttgcg gtggtcgcca tccggatctc
     2581 cgttctagtt ggggtgccgt cgcgggacgg cgcggccggg catctactcg gcctcggcgc
     2641 ggacgcgcgc ggcgaggatg taggcggcgg tgttgaaggc atcgaactgc gcgtagcgat
     2701 tgagggtcgt ctccggcgtt tccttggccc gggcttcggc gttgtagtcg gacgagaagt
     2761 gccaggtgtt gccgcccggg ttcagctcga ggacgtagac gcggccggtg cgatgatcgc
     2821 gcatgacgtc gcagccctgc agcggtgcct cggggaccgc ccgataggcg gcgcgagcgg
     2881 tctcgatgac gtcggcgtcg tagacgaagg cccgggtgcg atcggcggag tcgaggctct
     2941 gcatggcaat cgggctgtct tcgatgatgt catcgccggc gctgagatcg accttcctcg
     3001 agacggtgcc gttcttgatg cagtagagcg gctcgccgaa gaagctgagg acgcgaaagc
     3061 cgcccaagtg cccgtccatg ctgatgaatt gctggaccag catcggcgcg acgcggcccg
     3121 gatggccctc cgggtagtct tcgggcggcc ggtattttac ccgcgccgtc cgtatcagct
     3181 ggatgccgga gccatgggag gaggagccga gatcggtcgg cttgagcacc acgaactcgc
     3241 cccagcgctg tggatcgagc accgtgtcgg gccccagcat cgccgtcatc ggcaccggca
     3301 cgccggcggc gctgaggcgc ctgagctggt cgaacttatg gatctgctgg ccctggtaga
     3361 cccgaccgcg cgccggctgg aagcggccga gcggcccgaa cgaaacgacc agcgagggca
     3421 gcgccgcggc ggcatcgcgg gtgacgccgt cgtcgaggtc gccggcgacg acgaaggtgc
     3481 cgatcgtcgg atcgagccag cgcaccttgg cggcgatccg gtaaagatcg tcgggggcct
     3541 gccagccgcg gcggttgacc agcacgagat ggcgggtcac cggcgagcgg cgcacagccg
     3601 gagcagcggg ttcgagggtt gcggcggtcg ccatcgatat ctccattctc tcggcggggc
     3661 gccgcgagac aggtttcggg tgcgggctat tcagcctcgg cgcggacgcg gtcgaccagg
     3721 atgtgagcgg cgctcgcgaa ggcgtcgaac tgggccagcc gctgccggct cagctcgggt
     3781 ggatcctcgg cccgggcgct ggccatgaag tcggacgaaa aatgccaggt gttgccgccg
     3841 gggttgagct cgagcacata gacccgcccg gtgcgccggt cgcgcaggat gtcgcagccc
     3901 ttgagcggga tttcggggat gacgcgcgag gctttccgcg ccagggcgat gacgtccgcg
     3961 tcgtagacga ggtccttgcg cttctgcgca ttcgggtggc cctgggtggt gacgatcgcc
     4021 gcttcgagca cggcatcgtc ggacgagagc ggcggccgtc cggtcatggc cgtggcgcgc
     4081 tggcagatca gcggctcgtc gaacagggtc atgacgcgga acgccgaaag cgggctgccg
     4141 gtgtcgatga actgctgcac caccatcggc ccctgccggc ccgggtggcc ctcgggataa
     4201 tcctgcggcg cgatgtagcg cacccggccg gtgcgcatca gctggatgcc gctgccatgc
     4261 gacgacgagg cgatgtcggt cggcttgacg atgacgaact cgccccagcg ctgcggatca
     4321 agggcggtgt cgggcccgag catcatcgtc atcggtaccg ggatgccggc ggcgtcgagg
     4381 cgcttcagct gctcgaattt ctggatcgga cggccctggt agacccggcc gcgcgccggc
     4441 tggaacttgc cgagcggccc gaacgagacg accagcgagg gcagcgaggc cgccgcgtcg
     4501 cgggtgacgc cgtcgtcgag atcgccgggg accacgaaag tgccgatcgt ggggtccagc
     4561 cagcgcacct tggcggcgat gtggtagagg tcgttggggt cctgccagcc gcggcggttg
     4621 accagcacga ggtgccgctc gacctggggc ccgcggtgag cggcaggcgc cggggagggg
     4681 gccggcgcgg ccggcggctc ggttgcgggc gcatccatgg ttgccggcct cccgccagac
     4741 ttattcgcag ttccaccgcg gcggcggcaa attccgctcg cacaaacacc aaaaacaaag
     4801 aattatgtga tggttgacgg gtaatcgcaa gtggagcggg cgaatgcaac taccgaagct
     4861 tttggccctc gccggggtgc tggcggcaac gcagggcgcg ctcggccagg aggtggtgct
     4921 ggggggcggc gacaacgcgg cgccgcaagc ttcgagcaac tgggcgacgc gctgcgtggc
     4981 gacgtcgcgg caggacggct cggactgcac gatcgacgag cgggcggtgc agcaaagcac
     5041 cgggcagctg gtcggctcgg tgacggtgcg cgtccccggc cccggcaagc cgccgctgat
     5101 cctggtgacg gcgccgctgg ggctctacat tcccgccggg gtcagcgtcg acatcgacgg
     5161 ggccggggcg cagaagatcg acatccagac gtgcgatcgc ggcggctgct acgccagcgg
     5221 cacgctgtcc gacgcgctgc tcagcgcgat gcgggccggc aagacgctcg acatcgtgat
     5281 ccaggacgtc ggcaaacaga ccgtgaagct gcccatcccg ctcgccgggt tccccgcggc
     5341 ctacgacaag atcaagtgac gccggttccc gagagtccca aagcaacgcc gtcggccgcc
     5401 gccgctgcag cccgtgcgcc aagtgcggcg gtgcctccgg ctgcgaagcc gcggcggcac
     5461 ctgctcggca ccatgcaggt ggtgttcatc gcgctggcag tggcgatcgc cgccgcggct
     5521 gcggtgatct atgtgctctc gggcaacgcg gcgtggctgc tggagcgcgg ctcgccggcg
     5581 ccggccaagc ccgtcgcatc ggcggcttcg gctgcgtccc tggcgccagc ggtggccgct
     5641 aacggggcca gcgaggcacc ggcgccgccg aaggtcacca ccgagacgtt cggcgactgg
     5701 atcgtcgcct gtccggtcgg ccagaccgat cccgcggcct gcgtggcgca gcagcagctg
     5761 gtgtcgtcga ccggtgcggc ggtcctggtg tggagcatcc agcgcgatgc aggcggcacg
     5821 ctgcatgcgg tgtggcgggt gccgacgggc gtgctgctga accgcgggct gtcgatcgat
     5881 ctcggcgacg gcaagccgag cgccatcccg ttctccgcct gcgacagccg ctcgtgcgcc
     5941 gcacgggcgg tgatcgcgcc ggactacctg cagaagctcg aggcggcgac gcagatctcg
     6001 accacggtga cggtcgaagc caccggcaag gcgttcgggt tccacctcag cgccaagggg
     6061 ctcagcgacg cgctggccaa gctcgccgcg cactgaggcg atggctaccg ctgcggcgga
     6121 ggagaagccg ggcaagacgc cgggatgagg tgtgctgctg cgcgggggaa aaagaatggc
     6181 tccgcgagta ggactcgaac ctacgaccca gcggttaaca gccgcttgct ctaccaactg
     6241 agctatcgcg gaacattggc agcccgaagg cagcgcccgt gtagcgggtt tgatttcctt
     6301 tgccaaccgg attttttgaa cgctttccgg cggctggcgg agttgccgc
//
LOCUS       DATAZA010000251         2618 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3972734, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000251 DATAZA010000000
VERSION     DATAZA010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2618
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3972734"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            176..1309
                     /locus_tag="VHZ56_06400"
     CDS             176..1309
                     /locus_tag="VHZ56_06400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297637.1"
                     /translation="MGYSQNSLLSSIYELALGRSSWDSVLDILSATFPGCLVLISGYD
                     LTRRTSLVFSQRGLAPTAVSTYLANYADQNPWLAGTAELEPFQIYHDDQILPREQAQK
                     TSFYTEWLMRQGDFSAGTGVVILREGARQMSIEIRYPETDQALRERAAGILGEAAHHF
                     GRAFEILRRSRFAPGDGYLNNVVEDLPFAMFFVDEQLRIRYSNQHADGMRRSSDGPFS
                     GVDGILRAADETADQQLRELVQRVAASKRAPTSVLQLGRPGSDARYIAIARLASRGPQ
                     HYQLHDAILDSGPLIMLVVHGSLDPASLPMDLLWRAFGLTDSEAQLAEALLNGATLAD
                     FAREREVSKQTLRNQLVGVMRKTGTRRQSELVSLLTRLALTCL"
     gene            complement(1316..2275)
                     /locus_tag="VHZ56_06405"
     CDS             complement(1316..2275)
                     /locus_tag="VHZ56_06405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complex I NDUFA9 subunit family protein"
                     /protein_id="HEX4297638.1"
                     /translation="MDHPQLVTIFGGSGFVGTQVVQLMARAGYRIRVAVRRPDLAGYL
                     KPLGAVGQVAPIQANLRNRDSVMAAAKGAGIVINLAAIGIERGKQRFRAVNVVGARNV
                     AEAARAAGATRFVQMSVLGASESSSSVFARSRAAGEAEVRRLFPEAVILRPSIIFGVG
                     DSFFNTLGALTRVLPVMPLFGGRTRFQPVYVGDVAEAVAAAAQGAGSAGATYELGGPD
                     VLTHRQLLERVLEETHRTNPILPLPSVVGALMAMPMALLPKPLLTGDQVRLLNHDNVV
                     SGEAVQAGLTLAAFGITPRPLEAVLPSYLWRFAPNGQFDRQTA"
     gene            2453..2537
                     /locus_tag="VHZ56_06410"
     tRNA            2453..2537
                     /locus_tag="VHZ56_06410"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2487..2489,aa:Leu,seq:cag)
BASE COUNT          415 a         1007 c          820 g          376 t
ORIGIN      
        1 gcgggcgcgc gcggtaacca tacaatggta tatgaattgc taacgcccat gcgcgggcgc
       61 taagccattg tcacgacagg cggcaacctt cgctgagggg ccgccgaccc tccccggtcc
      121 ggcgcggggg cgtaagggca cctccggtcc agtatgcgta cggatgggac gtccgatggg
      181 ttactcgcag aacagcctgc tgagctcgat ctacgaactg gcgctcgggc gctccagctg
      241 ggacagcgtc ctcgacatcc tcagcgccac cttccccggc tgcctcgtgc tgatctcggg
      301 ctacgacctc acccgccgca ccagcctggt gttctcgcag cgcggcctgg cgccgacggc
      361 ggtctccacc tacctcgcca attatgccga ccagaacccg tggctcgccg gcaccgccga
      421 gctcgagccc ttccagatct accacgacga ccagatcctg ccccgcgagc aggcccagaa
      481 aacatcgttc tacaccgaat ggctgatgcg ccagggcgat ttctccgccg gcaccggcgt
      541 cgtcatcctg cgcgaaggcg cccggcagat gtcgatcgaa atccgctatc ccgagaccga
      601 ccaggcgctg cgcgagcgcg ccgccggcat cctcggcgag gcggcgcacc atttcggccg
      661 ggccttcgaa atcctgcggc gctcgcgctt cgcccctggc gacggctacc tcaacaacgt
      721 cgtcgaggac ctgcccttcg ccatgttctt cgtcgacgag cagttgcgca tccgctactc
      781 caaccagcac gccgacggca tgcgccgcag cagcgatggc ccgttcagcg gcgtcgacgg
      841 catcctgcgc gccgccgacg agaccgccga ccagcaactg cgcgaactgg tgcaacgcgt
      901 cgccgcctcc aagcgcgccc ccacctcggt gctgcagctc ggccggcccg gcagcgacgc
      961 ccgctacatc gccatcgccc ggctcgcctc gcgcggcccg cagcactacc agctgcacga
     1021 cgcgatcctc gactccggtc cgctgatcat gctcgtcgtg cacggcagcc tcgatccggc
     1081 cagcctgccg atggacctgc tgtggcgcgc cttcgggctc accgattcgg aagcccagct
     1141 ggccgaggcc ctgctcaacg gcgccaccct cgccgatttc gcccgcgagc gcgaagtgtc
     1201 caagcagacg ctgcgcaacc agctggtcgg cgtcatgcgc aagaccggca cgcgccggca
     1261 gtccgagctg gtgtcgctgc tgacccggct ggcgctgacc tgcctctgat ccggctcagg
     1321 ccgtctgccg gtcgaactgc ccgttcggcg caaaccgcca cagatagctc ggcagcaccg
     1381 cctcgagcgg ccgcggcgtg atgccgaagg cggcgagcgt caggcccgcc tgcaccgcct
     1441 cgccggaaac cacattgtcg tggttgagca gccgcacctg gtcgcccgtc agcagcggct
     1501 tcggcagcag cgccatcggc atcgccatca gcgcgccgac caccgaaggc agcggcagga
     1561 tggggttggt ccggtgcgtc tcttccagca cgcgctcgag cagctgccgg tgcgtcagca
     1621 cgtccggccc gccgagctca taggtggctc cggccgaacc ggccccttgc gccgccgccg
     1681 cgacggcctc ggcgacgtcg ccgacataca ccggctggaa ccgcgttctg ccaccgaaca
     1741 gcggcatcac cggcagtacc cgggtcagcg cgcccagcgt gttgaaaaaa ctgtcgccca
     1801 ccccgaagat gatcgaggga cgcaggatca ccgcctccgg gaacaggcgc cgcacctcgg
     1861 cctcgccggc cgcccgcgag cgggcaaaca cgctgctcga gctttccgac gcgcccagca
     1921 ccgacatctg cacgaaccgc gtcgcgcccg ccgcccgcgc ggcctcggcg acgttgcgcg
     1981 cccccaccac gttgacggcg cggaagcgct gcttgccgcg ctcgatgccg atcgccgcca
     2041 ggttgatgac gatgccggcg cccttggcgg ccgccatcac cgaatcgcgg ttgcgcagat
     2101 tggcctggat cggcgccacc tgcccgaccg cgccgagcgg cttcagatac cccgcgaggt
     2161 ccggccgccg caccgccacc cggatgcggt agcccgcccg cgccatcagc tgcacgacct
     2221 gcgtgccgac gaaccccgag ccgccgaaaa tcgtgaccag ttgcgggtga tccatgggca
     2281 gcagctccag ctcaaacctg tggcccgctt ctatcgcgaa gcctcgcgca ctgtcgagag
     2341 tcgtgcctcc attacgcgcc cggcggcgct ttgcggaaca aaccgcataa cggcgcgccg
     2401 ccggaattga cagtcctcgg gccatgccct aggggaacgg cgccctcggc gtgccccggt
     2461 ggcggaattg gtagacgcgc acggttcagg tccgtgtgac gcaagtcgtg gaagttcgag
     2521 tcttctccgg ggcaccactc tctcaggcag caagctctgc cagcccaggt gcgggggcgg
     2581 cggcgaccgc cgccgctact tcgagccgat ccggaaca
//
LOCUS       DATAZA010000252         2836 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1651484, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000252 DATAZA010000000
VERSION     DATAZA010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2836
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1651484"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..739
                     /locus_tag="VHZ56_06415"
     CDS             <1..739
                     /locus_tag="VHZ56_06415"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012067475.1"
                     /note="catalyzes the formation of malate from glyoxylate
                     and acetyl-CoA; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="malate synthase G"
                     /protein_id="HEX4297639.1"
                     /translation="KSERWIRAYEDRNVLIGLAAGFSGRAQIGKGMWARPDDMAAMLA
                     SKAAHPNAGANTAWVPSPTAATLHALHYHEVDVFEAQRRRHNEATPPLADLFSMPTLA
                     ASALDQAAITAELENNAQGILGYVVRWVDEGVGCSKVPDIHDVALMEDRATCRISSQA
                     IANWLRHGLVSKDQVTTVFERMAGMVDAQNAGDPAYIPMSGNFGSIAFQAALDLALKG
                     ADQPSGYTEPLLHAARERVKMSGEMRA"
     gene            complement(711..1820)
                     /locus_tag="VHZ56_06420"
     CDS             complement(711..1820)
                     /locus_tag="VHZ56_06420"
                     /inference="COORDINATES: protein motif:HMM:NF021134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase 87 family protein"
                     /protein_id="HEX4297640.1"
                     /translation="MRRPVILLLLFSVLALVVTYVGGIRHDYIYYLQQWQLVLDGADP
                     WSGNNAYGPLHNAFALLVPLHPLAPKLLSAACLLLANGMLVLALLRIRPFAAWRDTYL
                     LAFAGNLLILVSAFWFGLNDGFVAALLIGAVLARRDGRLLLAGLLLGLATLDKYYPAL
                     LIPFFALDARLVQPRLILAALVTIVLGIGAAIWLWGGDYLEAITYGVSRDATILSIFH
                     PLAVLGRRIGAGDAVDLVVRFNGPLVLLVWLAAIGAAWLRRDNWLTSACWGFFAVLLA
                     YKVGNPQYWVAWLTLVACLPLLDSPDADRLARLSWPYAIFLSLFELGYVVLQPQYYQE
                     NWHWIVDSVGVPSTALGLLQLWLWLRVRPASRPTS"
     gene            complement(1886..>2836)
                     /locus_tag="VHZ56_06425"
     CDS             complement(1886..>2836)
                     /locus_tag="VHZ56_06425"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEX4297641.1"
                     /translation="TSIGNDEFWDAIDHTHRLGPRTPPTDFLSGWYDFMLDQLLRDYE
                     TLVEAGGQPRLTVGPWFHVSPELQYEGLRGTLAWMNAKLLGDDSGLRDKPVRMHIGGR
                     DEWREFDAYPPGPADSQIWHLHPAGVLSQRPVKASAPDRYRYDPADPTPNIGGAIFAF
                     TGAGPADQAPLEARNDVLTFTSEPLFADLTIIGNVRATVYARASIPNADLFVKLCDVD
                     ATGRSTNVCDGILRKTSTDAAVADDIWKLQLKLHATAHCFRRDHHLRLIVASGAHPRY
                     ARNTGTDEPFGTATSLVPMEMEIFHDPEHPSAIHLPVYEL"
BASE COUNT          526 a          834 c         1064 g          412 t
ORIGIN      
        1 gaagtccgag cgctggatcc gcgcctacga ggaccgcaac gtgctgatcg ggctcgccgc
       61 cgggttttcg ggccgggcgc agatcggcaa gggcatgtgg gcaaggcccg acgacatggc
      121 ggcgatgctg gccagcaagg cggcgcatcc caacgccggc gccaacacgg cgtgggtgcc
      181 gtcgccgacg gcggcgacgt tgcatgcgct gcattaccac gaggtcgatg tcttcgaagc
      241 gcaacggcgt cggcacaatg aggcgacgcc gccgctggcg gatttgttct cgatgccgac
      301 gcttgcggcc agtgccctcg accaggccgc gatcaccgcc gagctcgaga acaatgcaca
      361 gggcatcctc ggctacgtgg tgcggtgggt ggacgaaggg gtggggtgct ccaaggttcc
      421 ggacatccac gatgtggcgc tgatggagga ccgggcgacc tgccggatct cgtcgcaggc
      481 catcgccaac tggctgcggc acgggctggt cagcaaggat caggtgacga cggtgttcga
      541 gcgcatggcg gggatggtgg acgcgcagaa cgccggcgac ccggcctaca ttccgatgag
      601 cggcaatttc ggttcgatcg cgttccaggc ggcgctcgat ctcgcgctca agggcgccga
      661 ccagccatcg ggatacaccg agccgctgct gcacgcggcg cgcgagcggg tcaagatgtc
      721 gggcgagatg cgggcctgac gcgcagccac agccagagct ggagcagccc gagcgcggtg
      781 ctcggcacac caacgctgtc gacgatccag tgccagtttt cctgataata ttggggctgg
      841 aggacgacgt agccgagctc gaaaagactg agaaagatcg cgtagggcca gctgagacga
      901 gccagccgat cggcatcggg cgagtcgagc agcggcaggc aggcaaccag cgtcagccac
      961 gcgacccagt attgcgggtt gccgaccttg taggcgagca acacggcgaa gaagccccag
     1021 caggccgagg tcagccagtt gtcgcggcgg agccacgcgg cgccgattgc ggccagccag
     1081 acgagcagca ccagcggacc gttgaaccgc accacgaggt ccacggcgtc gcccgcccca
     1141 atgcggcggc cgagcaccgc caaggggtgg aagatcgaga ggatggtggc gtcgcggctg
     1201 acgccatagg tgatcgcctc gagatagtcg ccaccccaca gccagatcgc ggcgcctatg
     1261 ccgaggacga tggtgacgag tgcggcaagg atcagccgcg gttgcaccag acgggcgtcc
     1321 agggcgaaga acgggatgag cagcgccgga tagtatttgt cgagtgtcgc gaggcccagc
     1381 agcaggccgg cgaggagcag gcgtccgtcg cggcgggcca gcaccgcgcc gatcaggagg
     1441 gcagcgacga agccgtcatt gaggccgaac cagaaggcgc tgacgaggat cagcaggttg
     1501 ccggcaaagg cgagaaggta ggtgtcgcgc cacgccgcga agggacgaat tcgcagcaag
     1561 gcgagcacca gcatgccgtt ggcgagcagc aggcaggccg cggagaggag cttcggggcc
     1621 agcgggtgga gcggcacgag gagcgcgaag gcgttgtgca gcgggccgta ggcgttgttg
     1681 ccgctccacg gatcggcgcc atcgagcacc agctgccatt gctggaggta gtagatgtag
     1741 tcgtgccgga tgccgccgac atacgtcacc acaagggcga gtacggagaa caggagaagc
     1801 aggattacgg gccggcgcat gcgcgcacta tgcgattggc cggttaattt ccgccgcatc
     1861 gggcggctcc gccaggtggc tgccgctaca gctcgtagac tggcagatgg atggcgctcg
     1921 gatgctccgg atcgtggaag atttccattt ccatcgggac gagcgaggtg gcggtgccga
     1981 aaggctcgtc ggtgccggtg ttgcgggcgt agcgcggatg ggcgccgctg gcgacgatga
     2041 ggcgcaaatg gtgatcgcgg cggaaacagt gcgcggtggc gtggagcttc agctgcagct
     2101 tccagatgtc gtcggcaacg gcggcgtccg tcgaggtctt gcgcaggatg ccgtcgcaaa
     2161 cattggtcga gcggcccgtc gcatccacgt cgcaaagctt cacgaagagg tcggcgttgg
     2221 ggatgctggc gcgcgcatag acggtcgcgc ggacgttgcc gatgattgtg aggtcggcaa
     2281 agagcggctc ggaggtaaac gtaagaacgt cgttccgagc ttcgagcggc gcctggtcgg
     2341 ccggtccggc gccggtgaag gcgaagatgg cgccgccgat attgggcgtg ggatcggcgg
     2401 ggtcgtagcg atagcgatcc ggggccgatg ccttgaccgg gcgttgcgac aagaccccgg
     2461 ccggatgcag gtgccagatc tggctgtcgg cagggcccgg gggataggcg tcgaactctc
     2521 gccattcgtc gcggccgccg atgtgcatcc gcaccggctt gtcgcgcagt cccgaatcgt
     2581 ccccgaggag cttggcgttc atccaggcaa gggtgccgcg aagaccttcg tattgcagct
     2641 cagggctgac gtgaaaccag gggccgacgg tcagccgggg ctggccaccg gcctcaacga
     2701 gagtctcgta gtcgcgcagc agctggtcga gcatgaagtc gtaccagccg gacaggaagt
     2761 cggtcggcgg cgtgcgcggg ccgagccggt gagtatggtc gatggcgtcc cagaattcgt
     2821 cattgccgat cgacgt
//
LOCUS       DATAZA010000253         4143 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2811515, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000253 DATAZA010000000
VERSION     DATAZA010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4143
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2811515"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1732
                     /locus_tag="VHZ56_06430"
     CDS             <1..1732
                     /locus_tag="VHZ56_06430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="von Willebrand factor type A domain-containing
                     protein"
                     /protein_id="HEX4297642.1"
                     /translation="TSHRMDAPPPSSARLPAGAPAKPGAGPTLQDHPVADVAATAPAT
                     TMERLAAISPPLPAQSPELAMAPAKAVALPAAPMTPTGDTFQKFDENRTKVTKDDPVS
                     TFSIDVDTASYSYVRSVLEGGSLPDPDAVRLEELINYFPYDYPAPASADTPFKATMAV
                     IPTPWNKKTELLEIGIKGYVPPVTVRAPENLTFLIDTSGSMAEPNKLPLLKRAFGLLV
                     DTLQPGDTVSVVTYAGSAGVALQPTAAADKAAILSAIDQLGAAGSTNGSDGIALAYQV
                     NAGAKRDGSVNRVILATDGDFNVGIDDPDQLKTFIKTERGRGTFLSVLGFGHGNLDDA
                     LMQSLAQNGDGNASYIDTLGEARKVLVEEGGANLVTIAKDVKLQVEFNPAQVSEYRLI
                     GYESRALDREDFNNDAVDAGDIGAGHTVTALYEITPAGAGADLVDPLRYASASAEPQP
                     ASDELGFLKIRYKAPDGDSSKLISTAITRDLVGDDLAKAGNDQRFAAAVAAFGQKLRG
                     SDYGGAMSWAQIADLANGARGSDADGYRAEFVQLVKLAASLDPDRGPAAADGGADTSA
                     AAPGDTSSTN"
     gene            1849..3078
                     /locus_tag="VHZ56_06435"
     CDS             1849..3078
                     /locus_tag="VHZ56_06435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004430422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA modification/repair radical SAM
                     protein"
                     /protein_id="HEX4297643.1"
                     /translation="MQLTLQRKLAILADAAKYDASCASSGTTRRDSRAGGIGSTEGAI
                     CHSYAPDGRCISLLKVLLTNFCIYDCAYCINRSSSNVPRARFGVEEVVALTLEFYRRN
                     YIEGLFLSSGIIRSPDYTMEQIVRVARALRVEHGYHGYIHLKVIPNAAPELLADAALY
                     ADRLSTNIELPTDASLEALAPDKAPRAIRTAMAQIEAKREESRPDGKTEEGKKKPTRL
                     APAGQSTQMIVGADGTDDAGILKRSATLYAGYGLKRVYYSAFSPIPDASRKLPLAAPP
                     LLREHRLYQADWLMRFYGFAADEIAVENGLLDLTVDPKLAWALKHRAMFPLDINRADR
                     ELLLRVPGLGVRSVDAIIASRRHHRLRLDDLRRVGASLGKLRPFIVAADWTPGATLDD
                     ARLRPKLAPPPQQLSLF"
     gene            3078..>4143
                     /locus_tag="VHZ56_06440"
     CDS             3078..>4143
                     /locus_tag="VHZ56_06440"
                     /inference="COORDINATES: protein motif:HMM:TIGR03915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03915 family putative DNA repair protein"
                     /protein_id="HEX4297644.1"
                     /translation="MHRVRLASLNDFDEWRQAARALLLQGVQPDEVIWEDPAAAVDLF
                     SDPAERPAAVAGRAVGVVPPRFIELAQAALCHREPARFGLCYRLLFRLQKDRTLIEVR
                     SDPDISRLHRLAGEVRRDSHKMKAFVRFRESESGFAAWFEPDHYVVERTAPFFARRFA
                     SMPWAILTPYRSVAWDGARLLFGEGARREDVPRADAMEETWRTYFASIFNPARLKVAT
                     MKSEMPVKYWRNLPEASLIPTLIRGAEQAEAEMIARASTEPPTRHHRAEARKIDAEGA
                     AEIVSLADARAAVQGCTRCPLYQYATQAVFGAGPADAEVMFVGEQPGDHEDLEGKPFI
                     GPAGQLFDRALETVGIDRRRV"
BASE COUNT          685 a         1416 c         1409 g          633 t
ORIGIN      
        1 gacctcgcac cggatggatg caccgccgcc aagctcggct cggttgccgg caggggcgcc
       61 ggccaagccg ggtgctggcc cgacgttgca ggaccatccc gtcgcggacg tcgcggccac
      121 tgcaccagca acgacgatgg aacgacttgc tgccatcagc ccaccgctgc cggcgcagag
      181 ccccgagctg gcgatggccc ctgccaaggc ggtggcgctg ccggccgcgc cgatgacgcc
      241 gaccggcgac accttccaga agttcgacga gaaccggacc aaggtgacca aggacgaccc
      301 ggtgtcgacc ttctcgatcg atgtcgatac ggcgtcgtac tcctatgtcc gcagcgtgct
      361 ggagggcggc tcgctgcccg atccggacgc ggtgcggctc gaggagctga tcaactattt
      421 cccgtacgac tatccggcac cggccagcgc cgacacgccc ttcaaggcaa cgatggcggt
      481 gatcccgacg ccgtggaaca agaagaccga gctgctcgaa atcggcatca agggctatgt
      541 gccgccggtc actgtccggg cgccggagaa cctgacgttc ctcatcgaca cttcggggtc
      601 gatggctgag ccgaacaagc tgccgctgct gaagcgggcg ttcgggctgc tcgtcgacac
      661 tctgcagccc ggcgacaccg tgtcggtggt gacctatgcc ggctcggcgg gggtagcgct
      721 gcagccgacg gcggccgccg acaaggcagc catcctgtcg gcgatcgacc agctgggggc
      781 cgcgggctcg accaatggat cggacggcat cgcgctcgcc taccaggtca acgccggggc
      841 caagcgcgac ggcagcgtca accgggtgat cctcgccacc gacggcgact tcaatgtcgg
      901 catcgacgat cccgaccagc tgaagacgtt catcaagacc gagcgcgggc gcggcacgtt
      961 cctcagcgta ctcggcttcg gccacggcaa tctcgacgat gcgctgatgc agagcctggc
     1021 gcagaacggc gacggcaacg ccagctatat cgacactctg ggcgaggcgc ggaaggtgct
     1081 ggtggaggag ggcggggcga acctcgtgac catcgccaag gacgtgaagc tgcaggtcga
     1141 attcaatcct gcccaggtga gcgaatatcg gctgatcggc tacgagagcc gggcgctcga
     1201 ccgcgaggat ttcaacaacg acgcggtcga tgccggcgac atcggtgccg gccataccgt
     1261 aacggcgctc tacgaaatca ccccggcggg tgccggtgcc gatctggtcg atccgctgcg
     1321 ctatgcttcg gcctcggccg agccgcagcc ggcgagcgac gagctgggtt ttctcaagat
     1381 tcgctacaag gccccggatg gcgacagcag caagctgatc agcacggcga tcaccaggga
     1441 cctcgtcggc gacgatctcg ccaaggccgg caacgaccag cgcttcgccg cggcggtcgc
     1501 cgccttcggc cagaagctca ggggctccga ctatggcggg gcgatgagct gggcgcaaat
     1561 cgccgacctt gccaatggcg cgaggggcag cgatgccgac ggctaccggg cggagttcgt
     1621 gcagctggtg aagcttgcgg cgagtctcga tcccgatcgc ggtccggcgg cggccgatgg
     1681 cggtgccgac acgtctgctg cggctccggg cgacacttct tccaccaatt gagcagtctc
     1741 ctggcgcgga gacgcccccg cctccgcgca aactgagagg gcccggctat cccgccgggc
     1801 cctttttctg ttggcaggct ttgataaaga acatatagtg aacaaacgat gcagctgacc
     1861 ctccagcgca agcttgcgat ccttgccgac gccgccaagt acgatgcgtc ctgcgcctcc
     1921 agcgggacga cccgccgcga cagccgggcg ggcggcatcg gctcgacgga aggcgcgatc
     1981 tgccattcct acgcgcccga cggacgctgc atctcgctgc tcaaggtgct gctcaccaat
     2041 ttctgcatct acgactgcgc ctactgcatc aaccgctctt cctcgaacgt gccgcgggcc
     2101 cgcttcgggg tcgaggaggt ggtggcgctg acgctcgaat tctatcggcg caactatatc
     2161 gagggtctgt tcctcagttc cgggatcatc cgctcgccgg actacacgat ggagcaaatc
     2221 gttcgcgtcg cccgcgcgct gcgggtcgag cacggctatc acggctacat ccacctcaag
     2281 gtcatcccca acgcggcgcc ggaactgctg gcggatgccg cgctctacgc cgaccggctc
     2341 tcgaccaaca tcgagctgcc gaccgatgcg agcctcgagg cgctggcgcc cgacaaggcg
     2401 ccgcgggcga tccgtaccgc catggcgcag atcgaagcaa agcgcgagga gtcgcgtccc
     2461 gacggcaaga cggaagaggg caagaagaag ccgacgcggc tcgcgccagc cggccagtcg
     2521 acgcagatga tcgtcggcgc cgatggcacg gacgatgcgg gcatcctcaa gcgcagcgcc
     2581 acgctctacg ccggctacgg cctgaagcgc gtctactact cggctttttc gccgatcccc
     2641 gatgcctcgc gcaagctgcc gctcgcggcg ccgccgctgc tgcgcgagca tcgcctgtac
     2701 caggccgact ggctgatgcg gttctatggc ttcgcggccg acgagatcgc cgtcgagaac
     2761 ggcctgctcg acctgacggt cgatcccaag ctggcctggg cgctcaagca ccgcgcgatg
     2821 tttccgctcg atatcaaccg cgccgaccgc gaattgctgc tgcgcgtgcc gggcctcggc
     2881 gtgcgcagcg tcgatgccat catcgcgtcg cggcgacatc accggctgcg gctcgacgat
     2941 ctgcggcgcg tcggcgcttc gctcggcaag ctccggccgt tcatcgtcgc ggcggactgg
     3001 acgcccggcg cgacgctcga cgatgcgcgg ctgaggccga agctcgcgcc gccgccacag
     3061 cagctgagcc tcttctgatg caccgggtcc ggctggcgtc gctcaacgat ttcgacgaat
     3121 ggcggcaggc ggcccgcgcg ctgctgctgc agggcgtgca gccggacgag gtgatctggg
     3181 aggaccctgc tgcggcggtc gatctgttct ccgacccggc ggagcggccg gctgccgtcg
     3241 ccggccgggc cgtcggggtc gtgccgccgc gcttcatcga actggcgcag gcggcgctgt
     3301 gccatcgcga gccggcgcgt ttcgggcttt gctaccgcct gctgttccgg ctgcagaagg
     3361 atcgcacgct gatcgaggtg cgctccgacc ccgacatcag ccggctccac cggcttgccg
     3421 gtgaggtccg tcgcgacagc cacaagatga aagcgttcgt gcgctttcgc gagagcgaat
     3481 ccgggttcgc cgcctggttc gagcccgacc actatgtcgt cgagcgaacg gcgccgttct
     3541 tcgcccggcg gttcgcgagc atgccatggg cgatcctcac cccctaccgc tcggtggcgt
     3601 gggacggcgc gaggctgctg ttcggggagg gggcgcgccg cgaggacgtg ccgcgcgccg
     3661 acgcgatgga agagacgtgg cggacgtatt tcgcctcgat cttcaatccg gcccgcctca
     3721 aggtcgcgac gatgaaatcg gagatgccgg tcaagtactg gcgcaacctt cccgaggcga
     3781 gcctcattcc gacgctgatc cggggcgccg agcaggcgga ggcggaaatg attgcacggg
     3841 cgagcaccga gccacccacc cggcaccacc gggccgaagc ccgcaagatc gatgccgaag
     3901 gcgccgccga gatcgtctcg ctggccgatg cgcgggcggc ggtgcagggg tgcacgcgct
     3961 gtccgctcta ccaatacgcg acgcaggcgg tgttcggggc cgggccggcc gacgccgaag
     4021 tgatgttcgt cggcgagcag ccgggcgacc acgaggatct cgagggcaag ccgttcatcg
     4081 gcccggcagg gcaattgttc gatcgtgcgc tcgagaccgt cggcatcgac cgccggcggg
     4141 tct
//
LOCUS       DATAZA010000254         4576 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2464295, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000254 DATAZA010000000
VERSION     DATAZA010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4576
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2464295"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            100..849
                     /locus_tag="VHZ56_06445"
     CDS             100..849
                     /locus_tag="VHZ56_06445"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEX4297645.1"
                     /translation="MSRDEKSEADQHPAAPPQRQPIFLLPAAVVVLCGLLLAIQAAGD
                     LVLNEDGREQLLTWFAFVPYRLIDPAGTPGGLWPLLWTPFTHAFLHAGWEHVLLNTVW
                     LAIFATPVTQRYGALRMLILFLVGAAVGALAFAATTLPQVQVLVGASGGIAALTGAAT
                     RFVFQPPVVVVDEKTGERHLAGRRLATLGEFLRNPTARFFALAWIVLNGIVPLLPLVT
                     GSDTVQIAWQTHIAGFLTGLLLVPLLERRQP"
     gene            846..1055
                     /locus_tag="VHZ56_06450"
     CDS             846..1055
                     /locus_tag="VHZ56_06450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SlyX family protein"
                     /protein_id="HEX4297646.1"
                     /translation="MTDAARLEALETAVAYQDQAIEDLNRTILAQAAEIAALKRLIGN
                     LGERLREIADNPALAEAAEPPPPHY"
     gene            complement(1049..2365)
                     /locus_tag="VHZ56_06455"
     CDS             complement(1049..2365)
                     /locus_tag="VHZ56_06455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008195908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX4297647.1"
                     /translation="MTQLAPRPWVPTETYIQSLAELTARQSNAEVADRIEGLIERNTQ
                     IHERDCFNLNPATNVMNPRAEAALSRKLGSRPSLGYPGDKYEMGLEAIEEIEVIAAEL
                     AAEVFDARYAEIRVGSGALANLYGFMALTRPGDTIIAPPASIGGHVTHHAAGCAGLYG
                     LVSLDAPVDAANYTLDVPALRALAHQHRPRLITVGGSLNLFPHPVREVRAIADEIGAK
                     VLFDAAHQCGMIAGRQWPNPLAEGAHLMTMSTYKSLGGPAGGLIVTNDAEIAQRLDAI
                     AYPGLTANFDAAKSAALAITLLDWREFGAAYADRMVAVSQALAAALSDLGLAVYGADR
                     GFTRSHQFALDAIPFGGGQAASKTLRKAGFLACGIGLPGRAIAGDVNGLRIGTPELVR
                     WGMTEADMPRLAGLIAEALRANDPAAIAPRTAEFRSQFRELHYVRQ"
     gene            complement(2362..2799)
                     /gene="hisI"
                     /locus_tag="VHZ56_06460"
     CDS             complement(2362..2799)
                     /gene="hisI"
                     /locus_tag="VHZ56_06460"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008133721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HEX4297648.1"
                     /translation="MSNPFADPAGLSHEQLEEGTVFAPRFDAQGLVTAVAQEASGRVL
                     MVAHMNDEAIRRTLETGEVHYYSRTRKALWKKGETSGEVQKLIRLGVDCDQDALLLIV
                     EQTGRGAACHTGRKSCFYRVVENGALKDTGEPRLFDPKDVYRK"
     gene            complement(2852..3478)
                     /gene="folE"
                     /locus_tag="VHZ56_06465"
     CDS             complement(2852..3478)
                     /gene="folE"
                     /locus_tag="VHZ56_06465"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HEX4297649.1"
                     /translation="MDASARPTAVKSLPIKTSNRPTREEAEAAVRTLIAWAGDDPTRE
                     GLLETPRRVARAYREFFAGYEEDPRTILEKTFKEVGGYDDIVLVKDIPFSSHCEHHMV
                     PFVGKAHIAYLPHDGVVGISKLARLVDVFSKRLQVQENLTAQIVDAINEHLNPRGAAV
                     MLEAEHMCMSMRGVRAHGAMTVTQRFTGVFAEEKSEQDRFFQMVRGGR"
     gene            3627..4079
                     /locus_tag="VHZ56_06470"
     CDS             3627..4079
                     /locus_tag="VHZ56_06470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly scaffold protein"
                     /protein_id="HEX4297650.1"
                     /translation="MELSDLYSQKILEIAANQPVPGRLARPDATARRVSRVCGASIEV
                     DIAVRDGRIAGYGHKISACALGQTSTAIVAANIVGTPVGEFRALRERMTAMLKADGAP
                     PDGRWADLGYLEPVREYGPRHASTLLVFDAVVDALDKIEAEQAVKAAS"
     gene            4076..4387
                     /gene="yidD"
                     /locus_tag="VHZ56_06475"
     CDS             4076..4387
                     /gene="yidD"
                     /locus_tag="VHZ56_06475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEX4297651.1"
                     /translation="MTRFASGFWRAIDLPFKLLAYGLIQLYRYTLSAFTGRTCRHAPS
                     CSEYTRDAIWRHGFWPGGWMGLARISRCRPRGTHGYDPVPENLPAAAHWYAPWGYGRW
                     S"
BASE COUNT          716 a         1491 c         1603 g          766 t
ORIGIN      
        1 gggaaatcgc ctttaaacct tccttaaggt taatgccggt gacgtgatgt gcataactcg
       61 gtgcggagcg agagaaagcc cgcaatcgct ggagatcgca tgagccgcga cgaaaaatcc
      121 gaggccgatc agcaccctgc ggcgccgccg cagcggcagc cgatcttcct gctgccggcc
      181 gcggtcgtcg tcctctgcgg gctgcttctc gccattcagg ccgcgggcga cctggttctt
      241 aacgaagacg gccgggagca actgctcacc tggttcgcct tcgtgccgta ccggctgatc
      301 gatccggccg gcacgcccgg cgggctatgg ccgctgctct ggacgccgtt cacccatgca
      361 ttcctccacg ccggctggga gcacgtgctg ctcaatacgg tgtggcttgc gatcttcgct
      421 acgcccgtca cgcagcgcta cggcgcgctc cggatgctga tcctcttcct cgttggagcg
      481 gcggtcggcg cgctggcgtt cgccgcgacc acgctgccgc aggtgcaggt tctcgttggc
      541 gcttcgggcg gcatcgcggc gctgaccggc gcggcgacgc ggttcgtctt ccagccgccg
      601 gtggtggtgg tcgacgaaaa gaccggggag cggcatctgg ccggacggcg gctggcgacg
      661 ctcggcgaat tcttgcgcaa ccccacggcg cggttcttcg ccctggcctg gatcgtgctg
      721 aacggcatcg tgccgctgct gccgctcgtc accggcagcg atacggtgca gatcgcctgg
      781 cagacgcaca tcgccggctt cctgacgggg ctgctgctgg tgccgctgct ggagcgacgg
      841 cagccatgac cgacgccgcg cgactggagg cactggagac ggccgtcgcc taccaggacc
      901 aggcgatcga ggatctcaac cggacgatcc tggcgcaggc cgccgaaatc gccgcgctca
      961 agcgcctgat cggcaacctg ggcgaacggc tgcgcgagat cgccgacaat ccggcgctgg
     1021 cggaagcggc cgaaccgcct ccgccgcatt actgacggac gtagtgaagc tcccggaact
     1081 ggctgcggaa ctcggccgta cgcggcgcga tcgcggcagg atcgttggcg cgcagcgcct
     1141 cggcgatgag gccggcgagc cgtggcatgt cggcttcggt catgccccag cgcaccagct
     1201 cgggcgtgcc gatgcgcagc ccgttgacgt cgccggcgat ggcgcggccg gggagcccga
     1261 tgccgcaggc caggaatccc gccttgcgca gcgtcttgct cgccgcctgg ccgccgccga
     1321 aggggatcgc atcgagcgcg aactgatggg agcgggtgaa gccccggtca gcgccataga
     1381 ccgcgaggcc gagatcgctg agggcggccg cgagggcctg tgagacggcc accatgcgat
     1441 ccgcataggc ggccccgaat tcgcgccagt cgagcagggt gatcgccagc gccgccgact
     1501 tggcggcatc gaaattggcg gtgaggccgg gataggcgat ggcatcgagc cgctgagcga
     1561 tctctgcatc gttggtgacg atcagcccgc cggccggtcc gcctaggctc ttgtaggtgc
     1621 tcatcgtcat caaatgggcg ccctcggcca gcggattggg ccactgccgg ccggcgatca
     1681 tgccgcattg gtgcgccgca tcgaacagca cttttgcgcc gatctcgtcg gcgatggcgc
     1741 gcacctcgcg caccgggtgg gggaacaggt tgaggctgcc gcccacggtg atgagcctgg
     1801 gccggtgctg atgggcgagg gcgcggagcg ccgggacatc gagcgtgtag ttggcggcat
     1861 cgacgggagc gtcgagcgag acgaggccgt aaagccctgc gcagccagcc gcatggtggg
     1921 tgacatggcc gccgatgctt gccggcgggg cgatgatggt atcgccgggc cgggtgagcg
     1981 ccatgaagcc gtagaggttg gccagcgccc cggacccgac gcggatttcg gcgtagcggg
     2041 catcgaagac ctcggccgcg agctcggcgg cgatgacctc gatctcctcg atcgcctcga
     2101 gacccatctc gtatttgtcg ccggggtagc ccagtgacgg ccgcgagccg agcttgcggc
     2161 tgagcgccgc ctcggcgcgc gggttcatga cgttggtggc cgggttgagg ttgaagcagt
     2221 cccgctcgtg aatctgcgtg ttgcgctcga tcagcccttc gatgcggtcg gccacctcgg
     2281 cgttcgactg ccttgcggtc agttcggcca gcgactggat gtaggtttcc gtgggcaccc
     2341 acgggcgcgg cgcgagctgt gtcatttgcg gtagacgtcc ttcggatcga acaggcgggg
     2401 ctcgccggtg tccttgagcg cgccgttctc gacgacgcgg tagaaacagc tcttgcggcc
     2461 ggtgtggcag gcggcgccgc ggccggtctg ctcgacgatc agcagcaacg catcctggtc
     2521 gcagtcgacg ccgagccgga tgagcttctg cacctcaccg gaggtttcgc ccttcttcca
     2581 caaggctttg cgcgtgcgcg agtagtagtg cacctcgccg gtctcgaggg tgcgccggat
     2641 cgcctcgtcg ttcatgtgcg ccaccatcag cacccggccg gatgcctcct gcgctacggc
     2701 ggtgacaagc ccctgggcgt cgaagcgcgg cgcaaacacc gtgccctcct cgagctgttc
     2761 gtgggaaagt ccggctgggt cggcgaaggg attgctcatg gcacgctaga tagaacgcgc
     2821 cacgagcgag cgccagattg ccgttgcgcg cctagcgccc gccgcggacc atctggaaga
     2881 agcggtcctg ctcggatttt tcttcggcga acacgccggt gaagcgctgc gtgacggtca
     2941 tcgcgccatg cgcccgcacg ccgcgcatcg acatgcacat gtgctcggcc tcgagcatca
     3001 cggcggcacc gcgcggattg aggtgctcgt tgatcgcgtc gacgatctgg gcggtgagat
     3061 tctcctgcac ctgcaggcgc ttggaaaaga cgtcgaccag ccgggcgagc ttggagatac
     3121 cgaccacgcc gtcatgcggc aggtaggcga tgtgggcctt gccgacgaac ggcaccatgt
     3181 ggtgctcgca atgcgaggag aacgggatgt ccttgaccag cacgatgtcg tcgtagccgc
     3241 cgacctcctt gaaggtcttc tcgaggatgg tgcgcggatc ttcctcatag ccggcgaaga
     3301 actcgcgata ggccctggcg acgcgccgcg gcgtctccag caagccttcc cgggtggggt
     3361 cgtctcccgc ccaggcgatc agcgtgcgaa cggcagcttc tgcctcctcg cgggtcggac
     3421 ggttggaagt cttgataggc agtgacttaa cggccgttgg ccgggcgctg gcgtccatga
     3481 gagttcctcg tgttcgggca tgagatgcgt acggggcccg aaatgttccg gatcatgcgc
     3541 agcccaaggg agccactgac atggaggcgg ctagtgacta tatctgtgag cagcttaccg
     3601 cctcaagaaa caggcatgtg accacaatgg aattgagcga tctttattcc caaaagatcc
     3661 tcgaaatcgc ggcgaaccag cctgtccccg gccggcttgc gcgtccggac gcgacggcgc
     3721 ggcgggtgag ccgggtgtgc ggggcctcga tcgaggtcga cattgccgtg cgcgacggcc
     3781 ggattgccgg ctacggccac aagatttccg cctgcgcgct gggccagacc tcgaccgcca
     3841 tcgtcgcggc gaacatcgtc ggcaccccgg tcggcgagtt ccgggcgctg cgcgaacgga
     3901 tgaccgccat gctcaaggca gacggcgcac cgccggacgg cagatgggcc gacctgggct
     3961 atctcgagcc ggtgcgcgag tacgggccgc gtcatgcatc caccctgctg gtgttcgacg
     4021 cggtcgtcga cgcgctcgac aagatcgagg cggaacaagc ggttaaggcg gccagttgac
     4081 tcggttcgcg agcggcttct ggcgcgccat cgacctgccg ttcaagctgc tggcctacgg
     4141 cctgatccag ctctaccgct acacgttgag cgccttcacc ggccgcacct gccggcatgc
     4201 gccgagctgc agcgaataca cccgcgacgc gatctggcgc cacggcttct ggccgggggg
     4261 atggatgggc ctggcgcgga tcagccgctg ccggccacgc ggtacgcacg gctacgatcc
     4321 ggtgcccgag aatctgccgg ccgcggcgca ctggtacgcg ccgtgggggt atggccgctg
     4381 gtcctgagcg accatgaact cctgccaccg cgcgcaggcg ccacgcatgg cgccgccagt
     4441 ctgcgtcatg gcccggcggg atgacacttt atgaacgggc gtgatatgag cccaactccg
     4501 ccaatcaggg cggccatgga gattgaaatg acgatcaagg tgacgttccc cgacggtgca
     4561 tcgcgcgact acgcgg
//
LOCUS       DATAZA010000255         2326 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3161771, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000255 DATAZA010000000
VERSION     DATAZA010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2326
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3161771"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..804
                     /locus_tag="VHZ56_06480"
     CDS             <1..804
                     /locus_tag="VHZ56_06480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002971682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4297652.1"
                     /translation="LLGNIISQVLQANNVPVTEKIQLGATSVVRKAIIAGQIDIYPEY
                     TGNGAFFFNKADDPLWNDAAKAYAEVAKDDYDANKIVWLAPAPANNTWAVALRKDFAD
                     QNHLVTFSDLGKFVAGGGKIKLAASAEFVSSPAALPKFEQVYGFTLTPDELVTLSGGD
                     TAATIAAAANQTSGVNAAMVYGTDGGIAPSGLVVLTDDKGVQPIYQPAPIIREAVLKQ
                     YPQIKDLLAPVFQKLDLTTLQTLNGRIQVGGEAAKAVAVDWLKTNGFLK"
     gene            844..2040
                     /locus_tag="VHZ56_06485"
     CDS             844..2040
                     /locus_tag="VHZ56_06485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018427363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4297653.1"
                     /translation="MAIAETPLPLKRAIAVDRLGVIIALLVAAALLTPFAIFRANRII
                     QGTSKSVLEALPAWGAAALLIACVALAIVAVLRNAPAQRLAASLGGVVVLFIAIGVAG
                     KFLTPAADTISRTSPGTGFWLLTLAFGLMSADAIARLRLKPWTRLALLAAAAIGIALL
                     LLSGIWSDLSVLREYANRADSFWREAATHVWLALGSLLAAAIVGIPLGIFCHRVPRLR
                     AAVLNVLNAVQTIPSIALFGLLIAPLAWVAATVPGATAIGIAGIGAAPALLALFFYSL
                     LPVVANTVVGLAGVPAAANDAARGMGMTDRQRLWTIELPLAFPVILTGIRIVLVQNIG
                     LATIAALIGGGGFGVFVFQGIGQTAMDLVLLGAVPTVALAFAAGVALDAVVEMVSPRG
                     GADARD"
     gene            2027..>2326
                     /locus_tag="VHZ56_06490"
     CDS             2027..>2326
                     /locus_tag="VHZ56_06490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015318238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4297654.1"
                     /translation="MLEIENLSKTYSGVRVVDDVSFSVPGGGFAVIVGTSGSGKTTLL
                     RMINRLVEPESGRVLIDGKDTREVPAYELRRQIGYAIQGHGLFPHRTVAQNIATVP"
BASE COUNT          349 a          829 c          721 g          427 t
ORIGIN      
        1 ttgctgggca acatcatctc gcaggtgttg caggccaaca atgttcccgt caccgagaag
       61 attcagctcg gtgcaacgtc ggtcgtacgc aaggcgatca tcgccgggca gatcgacatc
      121 tatcccgaat acaccggcaa cggcgccttc ttcttcaaca aggccgacga tccgctgtgg
      181 aacgacgcgg ccaaggccta cgccgaagtc gccaaggatg actacgacgc caacaagatc
      241 gtctggctgg cccccgcgcc cgccaacaac acctgggcgg tcgcactgcg caaggatttc
      301 gccgaccaga accatctggt gacgttctcc gatctcggca agttcgtcgc cggcggcggc
      361 aagatcaagc tcgcggcttc cgccgagttc gtcagctcgc cggccgcgct tcccaagttc
      421 gagcaggttt acgggttcac cctgactccg gacgaactgg tgacgctctc gggcggcgac
      481 accgcggcga cgatcgcggc agcggccaac cagaccagcg gcgtcaacgc cgcgatggtc
      541 tacggcaccg atgggggcat cgcgccgtcc ggcctcgtcg tcctcaccga cgacaagggc
      601 gtgcagccga tctatcagcc tgctccgatc atccgcgagg ccgtgctgaa gcagtacccg
      661 cagatcaagg acctgctggc gccggtgttc cagaagctgg acctcaccac gctgcagacg
      721 ctcaacggcc gcatccaggt gggcggcgag gccgccaagg cggtcgcggt cgactggctg
      781 aagaccaacg gcttcctgaa gtaatcgtgc tatgaggcgg gccccggccc gcctcatttg
      841 cccatggcca ttgcagaaac cccgcttccg ctgaagcgag ccatcgccgt cgaccggctg
      901 ggcgtcatca tcgccctgct ggtcgcggcc gctctgctta cgccgttcgc aatcttccgg
      961 gccaaccgca tcatccaggg caccagcaag tccgtgctcg aggctttgcc cgcctggggt
     1021 gcagcggcgc tgttgatcgc ctgcgttgca ctggccatcg tcgccgttct acgcaacgct
     1081 ccggcccagc gccttgcggc cagccttggg ggcgtcgtgg tcctgttcat cgccatcggt
     1141 gtcgcgggga agttccttac ccccgcggca gacaccatct cgcgtacctc gcctggaacc
     1201 gggttctggc tgctgaccct cgctttcggc ctgatgagcg ctgacgccat tgcccggctt
     1261 cgcctgaagc cctggacccg gctcgccctg ctggccgccg cggccatcgg catcgccctg
     1321 ctgctgctct cggggatctg gagcgatctg tcggtgctgc gcgaatacgc caatcgcgcc
     1381 gactccttct ggcgcgaggc ggcgacgcac gtctggctgg cgctgggatc gctgctggcg
     1441 gcagcgatcg tcggcattcc gcttggcatt ttttgtcacc gcgtgccgcg gctgcgcgcc
     1501 gccgtgctca atgtcctcaa cgccgtgcag accattccct ccattgcgct cttcggcttg
     1561 ctgatcgctc ccctcgcctg ggtagccgcg accgttcccg gcgcgacggc gatcggcatc
     1621 gccggcatcg gcgccgcacc ggcgcttctc gcgctgttct tctattcgct gctgccagtg
     1681 gtggccaaca ctgtcgtcgg gctggcagga gtgcccgccg cggccaatga cgccgcccgc
     1741 ggcatgggca tgaccgaccg gcagcggctc tggacgatcg agctgccgct cgctttcccc
     1801 gtgatcctta ccggcatccg catcgtcctc gtccagaaca tcgggctggc caccatcgcg
     1861 gccctgatcg gcggcggcgg cttcggcgtc ttcgtgttcc agggcatcgg ccagacagcc
     1921 atggatctcg tgttgctggg cgcggtaccg acggtcgccc ttgcctttgc tgccggcgtc
     1981 gccctggacg ccgtggtcga aatggtctcg ccgcgtggag gcgccgatgc tcgagattga
     2041 gaacctaagc aagacctatt ccggtgtccg cgtcgtcgac gacgtcagct tctcggttcc
     2101 cggcggcggc ttcgccgtga tcgtcggtac ctcgggctcg ggcaagacca ccctcctgcg
     2161 gatgatcaac cgcctcgtag aaccggaatc cggacgggtg ctgatcgacg gcaaggatac
     2221 ccgcgaggtg ccggcctacg agcttcgccg gcagatcggc tacgccatcc agggacatgg
     2281 cctgttcccc catcgcaccg ttgcccagaa tatcgccacg gtcccc
//
LOCUS       DATAZA010000256         1936 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_839108, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000256 DATAZA010000000
VERSION     DATAZA010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1936
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_839108"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(25..1056)
                     /locus_tag="VHZ56_06495"
     CDS             complement(25..1056)
                     /locus_tag="VHZ56_06495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297655.1"
                     /translation="MPETVFDFAIFGSTPFAGLLAGLLARDHGKRVLRVGRRVSPQRL
                     PRRLEMALTLASRPHTWKVLRDADAEIRRLLPSLGAASALSLADVEVRADTEATAIAL
                     AHAAHLALAHGMQVRQTRAGWIFRDVTTLGAEALEVALAAWLTALGVGAAEPDEATIS
                     FARGGAAELATVSGPIVLADDAALVDLLPDDARSDRLLVHSLTATLTSATRRLPAAVV
                     HFPDRGVRLVQRGGAVLGLVDGDADVEARLASTLAPPFPIRRVATGRSRRMLTGDGAP
                     LIGVVKPSRLFVVAGLGDAETFFAPAVARLLAGVAPDEEKRWFAAHDPARQSRVAVAD
                     FNAAAEVAP"
     gene            1176..>1936
                     /gene="ccmI"
                     /locus_tag="VHZ56_06500"
     CDS             1176..>1936
                     /gene="ccmI"
                     /locus_tag="VHZ56_06500"
                     /inference="COORDINATES: protein motif:HMM:TIGR03142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcmI"
                     /protein_id="HEX4297656.1"
                     /translation="MTIWLLALILTAIACATLYYAGAGRTVNAGASVLDATTEHFRAQ
                     LRAIDTDTAAGRMAAPEATAARGEIAREVMHLREETAPVVASSGRAVIVVPIVLVALL
                     AIGTYWFLGRPDLPSEPLVERTTAIAATGSGLDLGGAIKTIEARLAQNPGDLRGWQVI
                     APAYMQMGRYADAVTALRHVNALMTPTADSKTDLGEALMMANGGSVAGEPLDLFKQAA
                     ALDPTHVRSRYYIAGEETRVGDYADAARDWNALLAT"
BASE COUNT          293 a          734 c          663 g          246 t
ORIGIN      
        1 cgtgcgccgc atccaccgcg agcctcacgg cgcgacctcc gcggcggcgt tgaaatcggc
       61 gacggccacg cggctctggc gcgccggatc gtgcgccgcg aaccagcgct tctcctcgtc
      121 cggggcgacc ccggcgagca gccgcgccac cgccggcgca aagaacgtct cggcatcgcc
      181 caggcccgcg acgacgaaca gccgcgaggg cttcaccacc ccgatcagcg gcgcgccgtc
      241 gccggtgagc atccggcgcg agcggccggt agcgacgcgc cggatgggga agggcggcgc
      301 gagggtcgag gccaggcgcg cttccacgtc cgcatcgcca tcgaccagcc cgagcaccgc
      361 gccgccgcgc tgcaccagcc gcactccgcg atcggggaaa tgcaccaccg ccgccggcag
      421 ccgccgggtc gccgacgtca gcgtcgccgt cagcgagtgg acgagcagcc ggtcggaacg
      481 cgcatcgtcg ggcagcaaat caaccagcgc ggcatcgtcg gcgaggacga tcggtccgct
      541 gacggtcgcc agttcggccg caccgcctcg ggcaaacgag atcgtcgcct cgtcgggctc
      601 ggccgccccg acgccgagcg ccgtcagcca ggccgcgagc gccacctcga gcgcttcggc
      661 gccgagcgtc gtcacgtcgc gaaaaatcca ccccgccctg gtctgccgca cctgcatgcc
      721 gtgggccagc gccagatgcg ctgcgtgggc gagggcgatg gccgtcgcct cggtgtcggc
      781 gcggacctcg acatcggcga ggctcagcgc cgaagcggcg ccgagcgacg gcagcagcct
      841 gcggatttcc gcatcggcgt cgcgcagcac tttccaggtg tgcggccggc tcgccagggt
      901 caacgccatc tccagccggc gcggcagccg ctgcggcgag acgcgccggc cgacccgcag
      961 cacgcgcttg ccgtgatcgc gcgccaacag gcccgccagc agcccggcga acggcgtcga
     1021 gccgaagatc gcgaaatcga agaccgtttc cggcatcggt tcagccggca agtgcggcaa
     1081 tcggcgcctg ccattcggcg gcgcggcgat gcatattttg cctgaatgtc tctatagatg
     1141 ccgcggccgg caccgttttc aactccgctg aggccatgac catctggttg cttgccctga
     1201 ttctgaccgc catcgcctgc gccacgctgt attacgcggg cgccggacgg acggtcaacg
     1261 cgggggcgag cgtgctggat gcgaccaccg aacatttccg cgcgcagttg cgcgccatcg
     1321 acaccgacac cgccgccggc cgcatggccg cgcccgaagc gaccgcggcg cgcggcgaga
     1381 tcgcgcgcga ggtgatgcac ctgcgcgagg agacggcgcc cgtcgtcgcc agctcgggac
     1441 gcgcggtgat cgtcgtgccg atcgtgctgg tcgcgctctt ggccatcggc acctactggt
     1501 tcctcggccg ccccgacctg ccgtccgagc cgctggtcga gcgcaccacc gccatcgccg
     1561 ccaccggctc cggactcgat ctcggcggcg ccatcaagac catcgaggcg cgcctcgcgc
     1621 agaaccccgg cgacctgcgc ggctggcagg tgatcgcccc cgcctacatg cagatgggac
     1681 gctatgccga tgcggtgacc gcgctgcgcc acgtcaacgc gctgatgacg ccgaccgccg
     1741 acagcaagac cgacctcggc gaagcgctga tgatggccaa tggcggcagc gtcgccggcg
     1801 agccgctcga tctgttcaag caggccgcgg cgctcgatcc gacccatgtc cgctcgcgtt
     1861 attacatcgc cggcgaggaa acccgggttg gcgactacgc cgatgcggcg cgcgactgga
     1921 acgcgcttct ggccac
//
LOCUS       DATAZA010000257         3646 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3624732, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000257 DATAZA010000000
VERSION     DATAZA010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3646
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3624732"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..297
                     /locus_tag="VHZ56_06505"
     CDS             <1..297
                     /locus_tag="VHZ56_06505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX4297657.1"
                     /translation="RFQPMPGTEFELKADLVLLAMGFLGPVQDGMVKDFGIELDKRGN
                     VFADTFKYQTSKPKVFSCGDMRRGQSLVVWAIREGRQCARAIDLSLMGETALPR"
     gene            complement(307..1569)
                     /locus_tag="VHZ56_06510"
     CDS             complement(307..1569)
                     /locus_tag="VHZ56_06510"
                     /inference="COORDINATES: protein motif:HMM:NF016218.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HEX4297658.1"
                     /translation="MLRRVLLIVLLALLAAGDLSASPAYAQFFGGGNQQSQSGQPHRR
                     GLFDFLFGGGDDDQQQPAPPPPVVKPRKATLPVPPKPEIAKAATATRLAVFGDTLAVD
                     LAAALDRYYADDPNIIIINQGVGSSGFARPDYFDWDKTAADQVKANSFDLAVMIVGIN
                     DRQTINDGGKSEKALTPDWTTTYEARVSQFVTALESAKKPLVWVGLPPVAKPDLSSAL
                     GQISAVQRLAVFSGGAQFVDIYDKFVDDNGDYTDSGPDLNGNQVQMRKADGLRFTAAG
                     ADKLAFYVSQSIKLFYHGSGGVGLTIADALAGTDAAIMVRPPYQGLGQTRLLEVAGAV
                     IPLGQSAKPALDLVSTANAPTGAGFDVQQMLDAPQGRADAFGVGQAPATPAADSPTPV
                     STPTAATVAPAAASSVPPPATTSVAQSN"
     gene            complement(1610..2827)
                     /locus_tag="VHZ56_06515"
     CDS             complement(1610..2827)
                     /locus_tag="VHZ56_06515"
                     /inference="COORDINATES: protein motif:HMM:TIGR02283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEX4297659.1"
                     /translation="MLAARAVLAIGASLWLALLVLPARADTFAEFLTGFERVAVAAGV
                     SANVYEAATRGLTPDPAIPKLVETQPEFTTPIWTYLDQRVNDRRIADGKAAMAKNKAL
                     FAAIGRRFGVDPYLLGAIWGIETSYGAVLGNPHFIKPVIRSLATLVWEKRGRYELDKA
                     DFIAALKLVQRGPLDAAHLMGSWAGAIGHLQVNPVNILAHGTDGDGDGRIDLQDSLAD
                     ALATSAKFLLDLGYKPGLDWGYEVSVPRRFDYLLADRATMRPVSFFTALGVKRVHGKS
                     FADNSVPVFLFAPAGASGPNFLMTANYLVLKGYNFSDSYALSVAHLSDRLKGADGFAG
                     KWPRDTRLPDLEQRVAIEAALTRLGFYSGPADGRLGPLAAAAYAKFQASKGEIADGFF
                     TEKSFDELSAASR"
     gene            complement(2827..>3646)
                     /gene="galE"
                     /locus_tag="VHZ56_06520"
     CDS             complement(2827..>3646)
                     /gene="galE"
                     /locus_tag="VHZ56_06520"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEX4297660.1"
                     /translation="FVSNLIRDRGITEIVHFAGSISVPESVSDPLKYYRNNTSTSRNL
                     LEAAVRGGVERFIFSSTAAVYGMTGLEPVVETTPLQPMSPYGRSKLMTEWMLADVAAA
                     HPIKYGVLRYFNVAGADPQKRSGQSTPLATHLIKVAAQTALGQRPKMDIFGTDFPTPD
                     GTGVRDYIHVTDLIEAHALLLAHLRSGGESTTLNCAYGQGYSVRQVVDMVKDVSGVDF
                     RVDEGPRRAGDPAAITATGEKVRALLGWTPRYDDLRTIVTHAFGWERYLMTRNR"
BASE COUNT          577 a         1263 c         1219 g          587 t
ORIGIN      
        1 cggttccagc cgatgcctgg aacggagttc gagctcaagg ccgacctcgt gctgctcgcc
       61 atgggctttc tgggcccggt gcaggacggc atggtcaagg atttcggcat cgagctcgac
      121 aagcgcggca acgttttcgc cgacaccttc aagtaccaga cgagcaaacc caaggtgttc
      181 tcctgcggcg acatgcgccg cggccagagc ctcgttgtct gggccatccg cgaaggccgg
      241 caatgcgccc gcgccatcga tctgagcctg atgggcgaga ccgccctgcc gcgctagacc
      301 ggcgcctcag ttggactggg cgaccgatgt cgtcgcaggc ggcggcacgg acgatgcggc
      361 cgccggagcg acggtggcgg cagtgggcgt cgatacgggt gttgggctgt cggctgccgg
      421 cgtggccggt gcctggccga ccccgaacgc gtcggcccgg ccctgcggcg cgtcgagcat
      481 ctgctgcaca tcgaacccgg cgccggtcgg cgcattcgcc gtgctgacga gatcgagcgc
      541 cggcttggcg ctctgcccga gcgggatgac ggcgccggcc acttcgagca gccgcgtctg
      601 gcccagcccc tgatagggcg gccgcaccat gatcgccgca tcggtgccgg ccagcgcatc
      661 ggcgatagtc agcccgacgc cgccgctgcc atggtagaag agcttgatcg actggctcac
      721 atagaacgcc agtttatccg cacccgccgc ggtgaaccgc agcccgtcgg ccttgcgcat
      781 ctgcacctgg ttgccgttga gatccggacc gctgtcggta tagtcgccat tgtcgtcgac
      841 gaacttgtcg tagatgtcga cgaactgcgc gccgcccgag aatactgcca gccgctgcac
      901 cgcgctgatc tgccccagcg ccgacgacag gtcgggcttg gcgaccggcg gcaggccgac
      961 ccagaccagc ggcttcttgg cgctctcgag cgccgtcacg aactggctga cccgcgcctc
     1021 gtaggtcgtc gtccagtccg gcgtcagcgc cttctccgac ttgccgccat cgttgatcgt
     1081 ctgccggtcg ttgatgccga cgatcatcac cgcaagatcg aagctgttgg ccttcacctg
     1141 gtcggccgcc gtcttgtccc agtcgaaata gtccggccgc gcgaatcccg acgagccgac
     1201 gccctggttg atgatgatga tgttcggatc gtcggcgtaa tagcgatcga gcgccgctgc
     1261 gagatcgacc gccagcgtgt cgccgaacac cgccagccgc gtcgccgtcg ccgccttggc
     1321 gatctccggc ttgggcggca ccggcagcgt cgccttgcgc ggcttcacca ccggcggcgg
     1381 gggcgccggc tgctgctggt cgtcgtcgcc gccgccgaac aggaagtcga agaggccccg
     1441 ccggtgcggc tggcccgact ggctctgctg gttgccgccg ccgaaaaatt gcgcataggc
     1501 cggcgacgcc gacaggtcgc cggcggccag cagcgcgagc aggacgatga gcaggacgcg
     1561 gcgcagcacg ggcggactat gcccgccttt cccgccgaaa tgaaggcatc tagcggcttg
     1621 ccgccgacag ctcgtcgaag cttttttcgg tgaagaaccc atcggcgatt tcgcctttgc
     1681 tcgcctggaa cttcgcgtag gccgcggccg ccagcggtcc gagccgcccg tcggccggcc
     1741 cgctgtagaa gccgagccgg gtgagcgccg cctcgatcgc cacgcgctgc tcgaggtcgg
     1801 gcagcctggt gtcgcgcggc catttgcccg cgaacccgtc ggcccccttc agccggtcgc
     1861 tcagatgcgc caccgacagc gcgtagctgt cggagaaatt gtagcccttg agcacgaggt
     1921 aattggccgt catcaggaag ttcggcccgc tcgccccggc cggcgcgaac aggaacaccg
     1981 gcacggaatt gtcggcaaag ctcttgccgt gcacccgctt gaccccgagc gcggtgaaga
     2041 aggagaccgg ccgcatcgtc gcccggtcgg ccagcaggta gtcgaagcgg cgcggcacgc
     2101 tcacctcata gccccagtcg aggccgggct tgtagccgag atcgagcagg aacttggcgc
     2161 tcgtcgccag cgcatcggcc agcgaatcct gcaggtcgat cctgccgtcg ccatcgccgt
     2221 ccgtgccgtg cgcaaggatg ttgaccggat tgacctgcag gtgtccgatc gcacccgccc
     2281 acgagcccat caggtgcgcg gcgtcgagtg ggccgcgctg caccagcttc agtgccgcga
     2341 tgaaatcggc cttgtcgagc tcgtagcggc cgcgcttctc ccacaccagc gtcgcgagcg
     2401 aacggatcac cggcttgatg aaatgcggat tgcccagcac cgcgccatag ctggtctcga
     2461 tcccccagat cgccccgagc aggtacggat cgacgccgaa gcgccggccg atggcggcga
     2521 acagcgcctt gttcttggcc atcgcggcct tgccgtcggc gatccgccgg tcgttcaccc
     2581 gctggtcgag ataggtccag atcggcgtcg tgaattcggg ctgcgtctcg accagcttgg
     2641 ggatcgccgg gtcgggcgtg agtccccggg tcgcggcctc atagacgttg gcgctgacgc
     2701 ccgccgccac cgccacccgc tcgaagccgg tgaggaactc ggcgaacgta tcggcccgcg
     2761 ccggcagcac cagcaacgcc agccacaggc ttgcgccgat ggcgaggacg gcgcgcgccg
     2821 ccagcatcag cggttccgcg tcatcaggta gcgctcccag ccgaacgcat gggtgacgat
     2881 ggtgcgcaga tcgtcgtagc gcggcgtcca gccgagcagc gcccggactt tctcgccggt
     2941 ggcggtgatc gccgccgggt cgccagcgcg ccgcgggccc tcatcgaccc ggaagtcgac
     3001 acccgagacg tccttgacca tgtcgaccac ctgccgcacc gaatagccct gcccgtaggc
     3061 gcagttgagc gtcgtcgatt cgccgccgct cctcaggtgc gcgagcagca gcgcatgcgc
     3121 ctcgatcagg tcggtgacgt ggatatagtc gcgcacgccg gtgccgtccg gcgtcggaaa
     3181 atcggtgccg aaaatgtcca tcttcggccg ctggccgagc gccgtctgcg ccgcgacctt
     3241 gatcaggtgc gtcgcgagcg gcgtcgactg gccgctgcgc ttctgcggat cggcaccggc
     3301 gacgttgaaa tagcgcagca cgccgtactt gatcgggtgc gccgccgcga catcggccag
     3361 catccactcg gtcatcagct tggaccggcc atagggcgac atcggctgca gcggggtggt
     3421 ctccaccacc ggttcgagac cggtcatgcc gtaaaccgcc gcagtggacg aaaagatgaa
     3481 ccgctcgacg ccgccgcgca ccgccgcttc cagcaggttg cgcgaggtcg aggtgttgtt
     3541 tcgatagtat ttgagcggat cggaaaccga ctccggcacc gaaatggagc cggcgaaatg
     3601 cacgatttcg gtaatcccgc gatcgcggat cagattgctg acgaaa
//
LOCUS       DATAZA010000258         1811 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2579913, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000258 DATAZA010000000
VERSION     DATAZA010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1811
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2579913"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            80..730
                     /locus_tag="VHZ56_06525"
     CDS             80..730
                     /locus_tag="VHZ56_06525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006469985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016989 - sigma factor antagonist activity
                     [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ChrR family anti-sigma-E factor"
                     /protein_id="HEX4297661.1"
                     /translation="MMPRHHVADDLLLGYAAGSLAEGWSLAVATHLSFCADCRARLAA
                     AEAIGGHLLDSAAAATLDEASWATVRARLSTAQAGLVPQAQQPGTAILPRPLREYLGG
                     DLETVGWKVIGTAGAQFRLRTGDRETQVRLLKIRAGQPVPEHGHRGRELTVVLSGAFR
                     DGENLFGPGDIEDADSDLEHIPTATPEQDCICLAVTDAPLRFKSWLVRALQPILGI"
     gene            734..1135
                     /locus_tag="VHZ56_06530"
     CDS             734..1135
                     /locus_tag="VHZ56_06530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007599839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2177 family protein"
                     /protein_id="HEX4297662.1"
                     /translation="MRYVVAYLVTAIVFLGLDALWLTQVALGMYRRELGALLLDQPNL
                     VVAGLFYLLFVAGIVVLAVAPALNGGSWINALLMGAVLGLVAYGTYDITNLSTLRNWS
                     LTVTLADLAWGTVLSAVAATAGYLAVSWLKL"
     gene            1192..1809
                     /locus_tag="VHZ56_06535"
     CDS             1192..1809
                     /locus_tag="VHZ56_06535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015887960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HEX4297663.1"
                     /translation="MNNRQSTATVEQTPKEAILEGAERVFRQYGYAKTTVADIARELG
                     MSPANIYRFFPSKAAIHSALADRVVGHAEIEALQVARLQLPAAERLRLFVVGRYKSTV
                     AVMLQDRKVHDMVMVALEQQWDVVERHLDRMTGIVEMIIKDGMASGEFARGDSDLAAR
                     CFSAATVAVCHPQIVAQNLDKPGCPTPEEIADFAVQALITGDQRP"
BASE COUNT          286 a          635 c          587 g          303 t
ORIGIN      
        1 acctgccgct cggtacggtc aagtcgcgca tgcggctcgc tttggtgaag ctgcgcgccg
       61 cgctcggggg tgagaccgga tgatgccccg ccaccacgtc gccgacgatc tgttgctggg
      121 ctatgccgcc ggcagcctcg ccgaaggctg gagcctcgcg gtcgccacgc atctgtcgtt
      181 ctgcgccgac tgccgcgccc gcctcgccgc cgccgaggcg attggcggcc atttgctcga
      241 cagcgccgca gcggcgacgc tcgatgaagc ctcatgggca accgttcgcg cccgcctgtc
      301 gacggcacag gctgggctgg tgccgcaggc gcagcagccc gggaccgcaa tcctgcccag
      361 gccgctccgc gagtatctgg gcggtgatct cgagacggtc ggatggaagg tcatcggcac
      421 ggccggtgcc cagttccgcc tgcggacagg tgaccgcgaa acgcaggtgc ggctgctgaa
      481 aatccgcgcc gggcagcccg ttcccgagca cggtcaccgt ggccgggaac tgaccgtggt
      541 gttgtccggc gccttccgcg acggcgagaa cctgttcggg cccggcgaca tcgaggatgc
      601 cgacagcgac ctcgagcaca tcccgacggc gacgcccgag caggattgca tctgcctggc
      661 cgtcaccgat gcaccgctcc gcttcaagag ctggctggtg cgtgccctgc agccgatcct
      721 gggaatctga tccatgcgct atgtcgtcgc ctacctcgtc accgccatcg tgtttctcgg
      781 cctcgatgcc ctctggctga cgcaggtcgc cctcggcatg taccgccgcg agctcggcgc
      841 gctgctgctc gaccagccca atctcgtggt cgccgggctg ttctacctgc tgttcgtggc
      901 cggcatcgtc gttctcgccg tcgcgcccgc cctcaatggc ggcagctgga tcaacgccct
      961 gctgatgggc gccgtgctcg gcctcgtcgc ttacggcacc tatgacatca ccaatttgtc
     1021 gacgctgcgg aactggtcgc tgaccgtcac cctggccgat ctcgcctggg gaacggtgct
     1081 gagcgctgtc gcagccaccg cgggctacct cgccgtcagc tggctcaagc tgtagggcaa
     1141 aatcgatccg cacttgaccg gaccggtgac acgagcctat gactgacgat tatgaataac
     1201 cgtcagtcca ctgcaactgt tgagcaaacc cccaaggagg ccatcctcga gggggccgag
     1261 cgggtgttcc gccaatacgg ctacgccaag accaccgtcg ccgacatcgc ccgcgagctc
     1321 ggcatgtccc cggccaacat ctaccggttc ttcccatcga aggcggcgat ccactcggcg
     1381 ctggccgacc gcgtcgtcgg acacgccgaa atcgaggccc tgcaggtcgc gcggctgcag
     1441 ctgccggcgg ccgagcggct gcggcttttc gtggtcgggc ggtacaaatc cacggtcgcg
     1501 gtgatgctgc aggaccgcaa ggtccacgac atggtgatgg tcgcgctcga gcagcagtgg
     1561 gatgtggtcg agcgccacct cgaccgcatg accggaatcg tcgagatgat catcaaggac
     1621 ggcatggcca gcggcgaatt cgccagggga gacagtgact tggccgcccg ctgcttcagc
     1681 gcggcgacgg tcgccgtgtg ccatccgcag atcgtcgcgc agaacctcga caagcccggc
     1741 tgcccgactc cggaggagat cgccgacttc gccgtgcagg ccctcatcac gggcgaccag
     1801 cgaccttaaa a
//
LOCUS       DATAZA010000259         1582 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1883216, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000259 DATAZA010000000
VERSION     DATAZA010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1883216"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            63..950
                     /locus_tag="VHZ56_06540"
     CDS             63..950
                     /locus_tag="VHZ56_06540"
                     /EC_number="2.7.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008840628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="choline/ethanolamine kinase family protein"
                     /protein_id="HEX4297664.1"
                     /translation="MPDIEGRIAALPIWSGPVALAPLTGGISNLSFTATDDDGKYVVR
                     ITRDFPFHHVFRDREVMVSRAAYAAGFGPEIIHAEPGLMVSRFVEGKVLASEDVRADI
                     PRIADLVYRFHRDMAAGISGPGFIFWVFHVNRDYLHQLREAGHAEEPLGRWLAINAEL
                     EAAQTALPIVVGHHDLLPANLIDDGKRLWLIDYEYAGFDTGMFDLANLSSNNGFSPGQ
                     SQQLLDAYFGRAPAEEMLRSHAAMECASLLREALWSLVSVPHLDRPGVDYAAYAHENF
                     VKLDAALQAYRSHFGGATA"
     gene            947..>1582
                     /locus_tag="VHZ56_06545"
     CDS             947..>1582
                     /locus_tag="VHZ56_06545"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008872393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX4297665.1"
                     /translation="MTLPAHAQFVVIGGGIIGCSTAYHLAREHKADVVLLEQGKLTSG
                     STWHAAGLVGQLRSSASITQVLKRSVELYKTLEAETGLATGWKMTGCLRLATTEDRWT
                     EYKRLATTARSFGMEMELVSPAEVKKMWPLMETGDLVGASWLPTDGQASPSDITQSLA
                     KGARMHGANILEGVRVTGFDMDGRRITAVRTTAGTIACETVINCGGQWAREI"
BASE COUNT          266 a          560 c          501 g          255 t
ORIGIN      
        1 ggcaatcggc taacaagggc ggcttgccgg gcaaagtccc gcaattgggg attgtggggc
       61 tcatgccgga catcgaaggc cgtatcgccg cgctgccgat ctggtcgggt ccggtggcgc
      121 tggcacccct gacgggcggc atctccaacc tcagcttcac cgccaccgat gacgacggca
      181 aatacgtcgt ccgcatcacc cgcgacttcc cgttccacca tgttttccgc gatcgggagg
      241 tgatggtctc gcgcgccgct tacgccgccg gcttcggccc cgagatcatc cacgccgaac
      301 ccggcctgat ggtctcgcgc ttcgtcgagg gcaaggtgct agcaagcgag gacgtgcgcg
      361 ccgacatccc gcgcatcgcc gatctcgtct atcggttcca tcgcgacatg gcggccggga
      421 tttccggtcc cggcttcatc ttctgggtgt tccacgtcaa ccgcgactac ctgcatcagc
      481 tgcgcgaggc cggtcatgcg gaggagccgc tggggcgctg gctggcgatc aacgccgagc
      541 tcgaagccgc gcagacggcg ctgccgatcg tcgtcgggca ccacgacctg ctgccggcca
      601 acctgatcga cgacggcaag cggctctggc tcatcgacta cgaatatgcg ggcttcgaca
      661 ccggcatgtt cgacctcgcc aatctgagtt ccaacaacgg cttttcaccc gggcagtcgc
      721 aacaattgct ggatgcctat ttcggccgtg cgcccgccga ggaaatgctg cgcagccacg
      781 cggcgatgga gtgtgcgtcg ctcctccgcg aggcactgtg gtcgctggtg agcgtacccc
      841 acctcgaccg gccgggcgtc gactatgccg cctacgcgca cgagaatttc gtcaagctcg
      901 acgccgcgct gcaggcgtat cgcagccatt tcggcggggc caccgcatga cccttcccgc
      961 ccacgcccag ttcgtcgtca tcggcggcgg catcatcggc tgctccactg cctaccacct
     1021 cgccagggag cacaaggccg acgtggtgct gctggagcag ggcaagctca cctccggctc
     1081 gacctggcac gccgcaggtc tggtcgggca actgcgctcc tcggcgtcga tcacgcaggt
     1141 gctgaagcgg tccgtcgagc tgtacaagac gctcgaagcc gagaccggcc tcgccaccgg
     1201 ctggaagatg accggctgcc tgcgcctcgc aacgaccgag gaccgctgga ccgaatacaa
     1261 gcgcctcgcc accaccgccc gcagcttcgg catggagatg gagctggtct cgcccgccga
     1321 ggtcaaaaag atgtggccgc tgatggagac gggcgacctc gtcggcgcct catggctgcc
     1381 caccgacgga caggcgagcc cttccgacat cacgcagtcg ctggcaaaag gcgcacggat
     1441 gcacggcgcc aacatcctcg aaggcgtgcg cgtcaccggc ttcgacatgg acggccggcg
     1501 catcaccgcc gtgcggacca ccgcgggcac catcgcctgc gagaccgtca tcaattgcgg
     1561 cggccagtgg gcccgcgaga tc
//
LOCUS       DATAZA010000260         2820 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3856712, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000260 DATAZA010000000
VERSION     DATAZA010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2820
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3856712"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..524)
                     /locus_tag="VHZ56_06550"
     CDS             complement(<1..524)
                     /locus_tag="VHZ56_06550"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEX4297666.1"
                     /translation="MLNRLFIAIGVLVILAIGAAFVVPNFVQWSNYRGRLETMATEAF
                     GAPVAITGDIHLTLLPQPELEFTKVRVGPQSAPVLEVGHVAAEFSLLDFLRDQYNVTR
                     LELDQPVVTLTVAADGTLSSGLSLSERSAQSNVSIANAEVVGGAVRVTDMRSSGSYAA
                     EDVTGQLRLDALAGP"
     gene            751..>2820
                     /locus_tag="VHZ56_06555"
     CDS             751..>2820
                     /locus_tag="VHZ56_06555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEX4297667.1"
                     /translation="MTSQFGRRDVDYLKGLNAEQREAVVTIDGPLLVLAGAGTGKTRV
                     LTTRIAHILSTRKARGSEILAVTFTNKAAREMRDRVAGLVGSSVEAMPWLGTFHSIGA
                     RMLRRNAELVNLRSDFTILDTDDQIRLIKQLLEAENIDEKRWPARQFAGMLDNWKNRG
                     VLARDVTASDVGIYANGRAGKLYADYQSRLKTLNAVDFGDLLLEGIRLFREHPDVLRE
                     YHERFRYILVDEYQDSNVAQYLWLRLLAQGRPASEANVCVVGDDDQSIYGWRGAEVDN
                     ILRFEKDFPGAKIIKLERNYRSTSNILSTASHLIAHNESRLGKTLQTDVGERGDPVGV
                     TSVWDSEEEARTVGEEIEQLQRHGEKLNDIAILVRASYQMREFEERFITLGLNYRVIG
                     GPRFYERREIRDALAYLRLVANPSDTLAFERIVNTPKRGIGDGTIKTLFDTARATSQP
                     LLAATRTLLETEELKPKQRTTLRELVAQFDGWSERARTVPHAELAQEILDESGYTAMW
                     QSDKAPDSPGRLENLKELVNSMADFETLGGFLEHISLVMDRETGEAEDAVSIMTLHGA
                     KGLEFNSVFLPGWEEGLFPSQRTMDEGGRAGLEEERRLAYVGITRARKRARISLAQNR
                     RIHGLWQSALPSRFLDELPPEAVEVKDTGSAYGGYGYGGRTSSRFSTADPFDSAYETP
                     GWQRARAQ"
BASE COUNT          514 a         1011 c          887 g          408 t
ORIGIN      
        1 ggccccgcga gggcgtcgag ccgcaattgc ccggtcacat cctccgccgc gtaactgccg
       61 ctcgagcgca tgtcggtgac ccgcactgcg ccaccgacga cttcggcgtt ggcaatcgag
      121 acgttcgact gcgcgctccg ctcggaaagc gacagcccgg agctcagcgt tccgtcagct
      181 gcgacggtga gcgtcacgac cggctggtcc agttcgagcc gcgtgacatt gtactggtcg
      241 cgcaggaaat cgaggagcga gaactcggcc gcgacgtgcc cgacctccag cacaggcgcc
      301 gactgcggcc ccacccgcac cttggtgaat tcgagctccg gctgcggcag caacgtgagg
      361 tggatgtcgc cggtgatcgc caccggcgca ccgaacgcct cggtcgccat ggtttccagg
      421 cgaccgcgat agttgctcca ttgcacgaag ttcggcacga cgaacgccgc gccgatggcg
      481 aggatcacca gcactccaat ggcgatgaac aggcggttga gcacttgcgc ggcttcggcc
      541 ccgtgacgtc gttacgagtg taggcaaccc gctcccggcc gtcatccgtg cactggcttg
      601 cctccacggc agaatttggg cctcgcgcgg gccttagtgg ggttccgcgc atagcgctcg
      661 gagccctgcg cgcctatatg ggaggcaccg gaacaaaaag agattcgttc gcccgtgcct
      721 tccgcggaac cccttcgctc ggacaacccg atcaccagcc agttcggccg gcgcgacgtc
      781 gactatctca aggggttgaa cgccgaacag cgcgaggccg tggtcaccat cgacgggccg
      841 ctgctcgtgc tggccggcgc cggcaccggc aagacccgcg tgctgaccac gcgcatcgcc
      901 cacatcctca gcacccgcaa ggcgcgcggc agcgagatcc tcgcggtgac gttcaccaac
      961 aaggcagcgc gggagatgcg cgatcgcgtt gccgggctgg tgggctcgag cgtcgaggcg
     1021 atgccgtggc tgggcacctt ccactcgatc ggcgccagga tgctgcggcg caacgccgaa
     1081 ctggtcaacc tcaggtcgga cttcacgatt ctcgacaccg acgaccagat ccggctgatc
     1141 aaacagctgc tcgaggccga gaacatcgac gagaaacgct ggcccgcgcg gcagttcgcc
     1201 ggcatgctcg acaactggaa gaaccgtgga gttctggcac gcgatgtcac ggccagcgac
     1261 gtcggcatct acgccaacgg ccgcgccgga aaactctatg ccgactacca gagccggctg
     1321 aaaaccctga acgcggtcga tttcggcgac ctgctgctgg agggcatccg gctgttccgc
     1381 gagcacccgg acgtgttgcg cgaataccac gagcgcttcc gctatatcct cgtcgacgag
     1441 taccaggact ccaacgtcgc ccagtacctc tggctgcggc tgctggcgca gggccggccg
     1501 gcgagcgagg ccaatgtctg cgtggtcggc gacgacgacc agtcgatcta tggctggcgc
     1561 ggcgccgagg tcgacaacat cctgcgcttc gagaaggatt ttccgggcgc aaaaatcatc
     1621 aagctcgagc gcaactatcg ctcgacctcg aatatcctga gcaccgcctc gcacctcatc
     1681 gcccacaacg agagccggct cggcaagacg ctgcagaccg acgtcggcga gcgcggcgat
     1741 ccggtcggcg tcacctcggt gtgggacagc gaggaggaag cccgcacggt cggcgaggag
     1801 atcgagcagc tgcagcggca cggcgaaaag ctcaacgaca tcgccatcct cgtccgcgcc
     1861 tcctaccaga tgcgcgagtt cgaggaacgc ttcatcaccc tcggcctcaa ctaccgcgtc
     1921 atcggcggcc cgcgcttcta cgagcggcgc gaaatccgcg atgccctcgc ctatctccgc
     1981 ctcgtcgcca atccctccga cacactggct ttcgagcgca tcgtcaacac ccccaagcgc
     2041 ggcatcggcg acggcaccat caagacgctg ttcgacaccg cccgcgccac cagccagccg
     2101 ctgctggcgg cgacccgcac cctgctcgaa accgaggagc tgaagcccaa gcagcgcacc
     2161 accctgcgtg agctggtggc gcagttcgac ggctggtcgg agcgcgcccg caccgtcccg
     2221 cacgccgagc tggcacagga aatcctcgac gagagcggct acaccgcgat gtggcagtcc
     2281 gacaaggcgc ccgacagccc gggccggctc gagaacctca aggagctggt caactccatg
     2341 gccgacttcg agacgctcgg cggcttcctc gagcacatca gcctggtcat ggaccgcgaa
     2401 accggcgagg ccgaggacgc cgtctcgatc atgacgctgc acggcgccaa ggggctcgag
     2461 ttcaacagcg tcttcctccc cggctgggag gaagggctgt tccccagcca gcgcacgatg
     2521 gacgaaggcg gccgtgccgg actcgaggaa gagcgccgcc tcgcctatgt cggcatcacc
     2581 cgggcccgca agcgcgcccg catcagcctc gcgcagaacc gccgcatcca cggcctctgg
     2641 cagtcggccc tgccctcccg cttcctcgac gaactgccgc ccgaggcggt cgaggtcaag
     2701 gacaccggct cggcctatgg cggctacggc tatggcgggc gcaccagctc acgcttttcg
     2761 accgccgacc cgttcgacag cgcctacgaa acccccggct ggcagcgcgc ccgcgcccag
//
LOCUS       DATAZA010000261         5536 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3393177, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000261 DATAZA010000000
VERSION     DATAZA010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5536
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3393177"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            602..955
                     /locus_tag="VHZ56_06560"
     CDS             602..955
                     /locus_tag="VHZ56_06560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297668.1"
                     /translation="MSLSTLVKVAAVAATIAVTAGTASGAFAAPFLHGTIKWGGPVRA
                     HHDWFSFVTNNVWSGEHVTIDGQWGNFYHVSIPGPDGWVPRNEVHVNFGGPGWGFGGP
                     KACFFGPFGSFCVSP"
     gene            complement(1025..1465)
                     /locus_tag="VHZ56_06565"
     CDS             complement(1025..1465)
                     /locus_tag="VHZ56_06565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297669.1"
                     /translation="MPVVIELGLLLILVGGALNYVFRGRTALGRQAMVERRVDAYIET
                     IRRERKAPELVAMSDTELRDLLLSSAHNLKVQRDRRLYLLFGGVVVALIGAILVATED
                     GYRGFGIALLVGALVLYGVNEFLGRQMMAPLIAKGIDVERLRVE"
     gene            complement(1554..2480)
                     /locus_tag="VHZ56_06570"
     CDS             complement(1554..2480)
                     /locus_tag="VHZ56_06570"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX4297670.1"
                     /translation="MSDVASGARRDNVGRGIALTLFAILIFSTQDASSKFLVEGHSPF
                     QITMMRFWGFGAFSLLLVLRQGPLRHAFRSSAPWLQVSRGVLLVADIWLFAIALRTVG
                     LPELQAITLVYPLLVTLVAIPVLGERVGLFRFAAVGVGFLGALVIVRPGGLPLDWGVA
                     AGISSAACYAIYIVLTRKVSAADSTTTSMFYVGAVGLVLTSAVGVFYWSPLDTVSWLL
                     VIYIMITSCVAHGIMMVALSIAPASVLQPFNYTSLPWSILFSYFVFQHLIDPTSLLGA
                     AVIVGAGLVVMMRERIRRVPAAAAEPALPGKE"
     gene            complement(2541..2822)
                     /locus_tag="VHZ56_06575"
     CDS             complement(2541..2822)
                     /locus_tag="VHZ56_06575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015597280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297671.1"
                     /translation="MDWVGIIIQLILGAIGGYGTGRTVKQVSISPTVDSIVGLIGGFI
                     GTWIVGLIPGLAGLVAGGGAAYVGQGVTGLIGGAILTAIVGAIKNAVAK"
     gene            2977..3765
                     /locus_tag="VHZ56_06580"
     CDS             2977..3765
                     /locus_tag="VHZ56_06580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4297672.1"
                     /translation="MSPRPNRSTPGVALVTGAADRLGAAMALALAGAGYAVIVHHRGG
                     ADKARALVAEINATGGRAAALKADLAVRAQRAALVGKAARPFGPLTVLLNNASQFEPD
                     SVADLDDELWRQHFAVHVEAPAFLARDFAAQLPAGIEGNIVNIVDERVLHLTPNYFSY
                     TLSKATLATMTHTLAQSLAPRIRVNAIAPGPTLREKSQTVAAFRQSQAGSPLGYGATP
                     ADVAGALLYLLDARAVTGQLIAVDGGRSVDFPPRRGPTPRRPAK"
     gene            3762..>5536
                     /gene="uvrC"
                     /locus_tag="VHZ56_06585"
     CDS             3762..>5536
                     /gene="uvrC"
                     /locus_tag="VHZ56_06585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEX4297673.1"
                     /translation="MTDAMETGADIIRAFVRTLPSAPGVYRMIDEAGEVMYVGKARSL
                     KARVTNYTRPEALEVRLQRMVAATRTMEFVRTETEAEALLLEANLIKRLKPRFNVLLR
                     DDKSFPYILIAADHDAPMLSKHRGVRRRPGAYFGPFASALAVKRTITSLQKAFLLRTC
                     SDSFYRARTRPCMLHQIKRCSAPCTGEISIDAYAELVGEANQFLSGKSKSVQDRLQHE
                     MNGAAEALDFERAALLRDRLSALALVQSQGEIAARSVEEADVFAVAHEAGQFCVQVFF
                     FRAHQNWGNHAYRPKADPTLADTDVLEAFMGQFYEDRTPPKLVLLSHEPSDRAVLEEA
                     LTSRLGSRVHVEIPQRGEKRDLVNHALNNAREALGRQLAEGATQKTLLEGVADLFALD
                     EPPRRIEVYDNSHISGTNAVGAMIVSGEEGLSKKHYRTFNIRSTDITPGDDFGMMREV
                     LTRRFSRLASESPPEAEDEQSGMPDWPDVVFIDGGAGQLGAVREVIAGMDLPREVTFI
                     GIAKGEERDAGREKFFMEGREPFMLPHRDPVLYFVQRLRDEAHRFAIGTHRARRKKDF
                     VSNPLDEIDGIGPTRKRALLQHFGSA"
BASE COUNT          916 a         2154 c         1646 g          820 t
ORIGIN      
        1 ttcatcgaga tcggcaccgc cctcgcgctg gtcgacaagg ccatcgagaa cgagctcgac
       61 ctgaccccgc tcccgcgcat cgacgacccc accacgccgc cgcccttccc ggactcggac
      121 aaggggccgg cgctgatcga gaccctttga gcggaccgcc ggccgcccac gtccacgcaa
      181 cttatccccg tcgtttccac ccggcgtaaa actcccctca tccggttcgc acggacggtg
      241 tcgacggcga acgaagcgga ccggacaggc aggaggctcg ggcgttcgtc cgctggggcc
      301 ggctccgtga atcggccggt ggttgtgcca tcgacgaccg cggttccgca aatcctgtcg
      361 ccgcgggacg cctgcgcctc gcacatataa catcacgggg cgcaggcgtc ccgcggcacc
      421 cgtccatccg atcctccggg cttgccgcca cggagcgcga acccgtgtcg aaaaacccgc
      481 ccatgaatta ttggtaatat ttcattctaa acgccgccgt cagcctcggt tcagccgcgc
      541 ccctctagag ctcgggtcaa ggcaagcgat tgcccacccc gaactccgaa aggatcttcc
      601 gatgtccctc tccaccctcg tcaaggtcgc cgccgtcgcc gcgaccatcg ccgtcaccgc
      661 cggcaccgcc tccggcgcct tcgccgcccc gttcctccac ggcaccatca agtggggcgg
      721 cccggtccgc gcccaccacg actggttctc gttcgtcacc aacaacgtct ggtcgggcga
      781 gcacgtcacc atcgacggcc agtggggcaa tttctaccac gtcagcatcc cgggcccgga
      841 cggctgggtc cccaggaatg aagtgcacgt gaacttcggc ggccccggct ggggttttgg
      901 cggccccaag gcctgcttct tcggcccgtt cggctcgttc tgcgtcagcc cctgatcgcg
      961 cccccggtca ggtcgccgcg ccggcctctc ccccgaggcc ggcgactccg attccggcgg
     1021 cggcctactc gacccgcagc cgctcgacgt cgatgccctt ggcgatcagc ggcgccatca
     1081 tctgccggcc gaggaattcg ttgacgccgt agagcaccag cgcccccacc agcagcgcga
     1141 tgccgaagcc gcgatagccg tcctcggtcg ccaccaggat cgccccgatc agcgccacca
     1201 ccacgccgcc gaacagcagg tacagccgcc ggtcgcgctg caccttgagg ttgtgcgcgc
     1261 tcgacagcag caggtcgcgc agctcggtgt cgctcatcgc caccagctcc ggcgccttgc
     1321 gctcgcgccg gatggtctcg atataggcgt cgacgcggcg ctcgaccatc gcctgccgcc
     1381 ccagcgccgt gcgcccgcgg aacacatagt tcagcgcccc gccgacgagg atcagcagca
     1441 gccccagttc gatcaccacc ggcatcggct catccctttc gcgcgcgcca cgccgataac
     1501 gtgcccatcg cggccgcccg attcaaggcc gcccgccccg cacggggtta cgctcactcc
     1561 ttgcccggca gcgccggctc ggcggcagcc gccggcaccc ggcggatccg ctcgcgcatc
     1621 atcaccacca gccccgcccc gacgatcacc gccgcgccca gcagcgaggt cgggtcgatc
     1681 aggtgctgga agacgaaata gctgaacagg atgctccacg gcagcgacgt atagttgaac
     1741 ggctgcagca cgctcgccgg cgcgatcgac agcgccacca tcatgatgcc gtgcgccacg
     1801 cagctggtga tcatgatgta gatcaccagc agccacgaca ccgtgtcgag cggcgaccag
     1861 tagaacaccc cgaccgccga ggtgagcacc aggcccacgg ccccgacata gaacatgctg
     1921 gtcgtggtcg aatccgccgc cgacaccttg cgggtcagga cgatgtagat cgcgtagcac
     1981 gccgccgagc tgatccccgc cgcgacgccc cagtcgagcg gcaatccgcc cggccgcacg
     2041 atcaccagcg ccccgaggaa gccgacgccc acggcggcaa accggaacag cccgaccctc
     2101 tcgcccagca ccgggatcgc caccagcgtc accagcagcg gatagaccag cgtgatcgcc
     2161 tgcagctcag gcagccccac cgtgcgcagc gcgatggcga acagccagat gtcggcgacc
     2221 agcagcacgc cgcggctgac ctgcagccat ggcgcactcg accggaaggc gtgccgcagc
     2281 ggtccctgtc gcagcaccag cagcagcgag aaggcgccga acccccagaa ccgcatcatc
     2341 gtgatctgga acggcgagtg cccctccacc aggaacttcg aactcgcgtc ctgggtggaa
     2401 aagatcagga tcgcgaacag cgtcagcgca atgccacgcc cgacattgtc ccgccgcgcg
     2461 ccactcgcca catcgctcat ttcgtcgatc cgcagggagc gccgggccgg ctttccggcc
     2521 cggcacagga aatattgccg ttacttggcg accgcgttct tgatcgctcc gacgatcgcc
     2581 gtgaggatcg ccccgccgat caggccggtc acgccctgcc cgacataggc cgctccgcca
     2641 cccgccacaa gtccggcaag tcccgggatc agcccgacga tccacgttcc gatgaagccg
     2701 ccgatcagcc cgacgatgct gtcgacggtt ggactgatgc tgacctgctt gaccgttcgg
     2761 cccgtgccgt acccgccaat tgcacccagg atcagctgga tgatgatacc tacccaatcc
     2821 atagcctgca ctccttccca ttgacggggt gcaacccccg tttcgcagct gcgagcctag
     2881 tccggccgac tccgcccgca agcgccgcgg tcgggttttg ccccgcgaac tccggctctt
     2941 ccgatcccgc tcgcgacgac ctatctttcg cttcccatga gcccccgccc gaatcgttca
     3001 accccaggcg tcgccctcgt caccggcgct gccgatcggc ttggcgccgc catggcgctg
     3061 gcgctcgccg gcgccggcta cgcggtgatc gtccaccatc gcggcggcgc cgacaaagcc
     3121 cgcgccctgg tcgccgaaat caacgccact ggcggccggg cggccgcgct caaggccgat
     3181 ctcgccgtgc gggcgcagcg tgccgccctc gtcggcaaag ccgccaggcc gttcggcccg
     3241 ctcactgttc tcctcaacaa cgcctcgcag ttcgagccgg actcggtcgc cgatctcgac
     3301 gacgagctct ggcgccagca ctttgccgtc cacgtcgagg cgccggcctt cctcgcccgc
     3361 gattttgccg cccagctccc cgccggcatc gagggcaaca tcgtcaacat cgtcgacgag
     3421 cgggtgctgc acctgactcc caactatttc agctacaccc tgagcaaggc gacgctcgcc
     3481 accatgaccc acacgctggc gcagtcgctc gccccgcgca ttcgcgtcaa tgccatcgcg
     3541 ccgggcccga cgcttcggga gaaatcgcag accgtggcgg ccttccgcca gtcgcaggcc
     3601 ggctcgccgc tcggctacgg cgccactccc gccgatgtcg ccggagcgct gctctacctg
     3661 ctcgatgccc gcgcggtgac cggccagctg atcgccgtcg atggcggccg ctcggtcgat
     3721 ttcccgccgc ggcgcggccc gacgccacgg cggccggcaa aatgaccgac gccatggaaa
     3781 ccggcgccga catcattcgc gccttcgtcc gcaccctgcc gtccgctccc ggcgtctatc
     3841 gcatgatcga cgaggccggc gaggtcatgt acgtcggcaa ggcgcgcagc ctcaaggcgc
     3901 gcgtcaccaa ctacacgcgg cccgaggccc tcgaggtccg gctgcagcgg atggtcgccg
     3961 ccacccgcac catggagttc gtgcgcaccg agaccgaggc cgaggcgctg ctgctcgagg
     4021 ccaacctcat caagcggctg aaaccccgtt tcaacgtcct gctgcgtgat gacaagagct
     4081 tcccctacat ccttatcgcc gccgaccacg atgcgccgat gctgagcaag caccgcggcg
     4141 tccgccgccg gcccggcgcc tatttcggcc ccttcgcctc ggcgctcgcg gtcaagcgca
     4201 ccatcacgtc gctgcagaag gccttcctgc tgcgcacctg ctccgacagc ttttaccggg
     4261 cccgcacccg gccctgcatg ctgcaccaga tcaagcgctg ctcggcaccg tgcaccggcg
     4321 agatttcgat cgacgcctat gccgagctgg tcggcgaggc caaccagttt ctctccggca
     4381 agtcgaaatc ggtgcaggac cgcctgcagc acgaaatgaa cggcgccgcc gaggcgctcg
     4441 acttcgagcg tgccgcgctg ctgcgcgacc gcctctcggc cctcgccctc gtgcagagcc
     4501 agggcgagat cgccgcccgc tcggtcgagg aggccgacgt ctttgcggtc gcccacgaag
     4561 ccggccagtt ctgcgtccag gtcttcttct ttcgcgccca ccagaactgg ggcaaccacg
     4621 cctaccggcc caaggccgac ccgactctcg ccgataccga tgtgctcgag gccttcatgg
     4681 gccagtttta cgaggaccgc acgccgccaa agctggtgct gctgagccac gaaccctccg
     4741 accgtgccgt gctcgaggag gccctcacct cgcgccttgg ctcccgcgtc catgtcgaga
     4801 tcccgcagcg cggcgaaaag cgcgacctcg tcaatcacgc cctcaacaac gcccgcgagg
     4861 cgctcggccg ccagctggcg gagggggcga cgcaaaagac cctgctcgag ggcgtcgccg
     4921 atctgttcgc gctcgacgag ccgccgcggc gcatcgaggt ctacgacaac tcgcacatct
     4981 ccggcaccaa cgccgtcggc gccatgatcg tctccggcga ggaaggcctc agcaagaagc
     5041 actaccgcac cttcaacatc cgctcgaccg acatcacgcc cggcgacgat ttcggcatga
     5101 tgcgcgaggt gctgacccgc cgcttttccc gtctcgccag cgaaagcccg ccggaggccg
     5161 aggacgagca gagcggcatg cccgactggc ccgacgtggt cttcatcgat ggtggcgccg
     5221 gccagctcgg cgccgtccgc gaggtcatcg ccggcatgga cctgccgcgc gaggtgacct
     5281 tcatcggcat cgccaagggc gaggagcgcg acgccggccg cgagaaattc ttcatggagg
     5341 gccgggagcc cttcatgctg ccgcatcgcg atccggtgct gtatttcgtg cagcgcctgc
     5401 gcgacgaagc ccaccgcttc gccatcggca cccatcgcgc caggcgcaag aaggatttcg
     5461 tctccaaccc gctcgacgag atcgacggca tcggtccgac ccgcaagcgc gccctgctgc
     5521 agcatttcgg ctcggc
//
LOCUS       DATAZA010000262         4904 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3973605, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000262 DATAZA010000000
VERSION     DATAZA010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4904
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3973605"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="VHZ56_06590"
     CDS             complement(<1..222)
                     /locus_tag="VHZ56_06590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297674.1"
                     /translation="MNLVMKKSPCIAGGAAVPRDKPSRVGNDTSLHFGARQEGKPEFL
                     NVWSKTVRQILPRQRCHDRSHLGTDRSKEA"
     gene            209..1219
                     /locus_tag="VHZ56_06595"
     CDS             209..1219
                     /locus_tag="VHZ56_06595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008127764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX4297675.1"
                     /translation="MTRFTRHFGALAVGVAAAALMAGAALADPAIIYDLGGKFDKSFN
                     EAGFNGATQWAKDTGGKFHDLELQNDAQRPEAIRKMASAGYSPIVLPGFAWTDTLTKV
                     APEFPKIHFVLIDSVVDAPNVMSVVYKSNDASYLAGVLAAKKSATGKVGFVGGMDIPL
                     IHAFFCGYLEGVMDTNPQAQVFENYTGTTPDAWNNPVGAGELAKADFDKGADIVYAAA
                     GGSGLGVLQAAKDAGKLSIGVDSDQNYIQPGSVLTSVLKRVDVTTYDAFKDDADFKAG
                     TVVQGLAEKGVGLAMDDYNKPLLTADLTKAVDDAQAKIIAGTIKVHDYTTDSACPQNS
                     GS"
     gene            1285..2805
                     /locus_tag="VHZ56_06600"
     CDS             1285..2805
                     /locus_tag="VHZ56_06600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014766560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4297676.1"
                     /translation="MELRKINKRFGPVWANRDIDLAVKRGTIHGIVGENGAGKSTLMS
                     ILYGFYTADSGEIYVNGKLEHITDSRHALALGIGMVHQHFMLVDNFSILENVILGVEG
                     GGLLAPSLARARKELKRLADEYGLDVHPDAIVQDVSVGQQQRVEILKALYRGADTLIL
                     DEPTGVLTPAEADDLFRVLHLLREQGKTVILITHKLREIMAITDTVSVMRQGQMVGTM
                     PTSETSPERLAELMVGRRVLLRVEKGPAHPRQPLLEVRNLVVADDLRVPRVKDVSFTV
                     RAGEIVGIAGVAGNGQSELLESIAGMRDQQSGEVLVSGKPLAIRGDDGAARARQAGLA
                     HVPEDRQAEGLVVQFEEWENNILGYQDDPAYGRGAILDIAAARRQAAERMEKFDVRPA
                     NPRLKTASFSGGNQQKIVLAREMEHNPDVLVVGQPTRGVDIGAIEFIHNQIIKMRDAG
                     KAILLISVELDEIRSLSDRILVMFDGRIVGEADPAVATEGELGLMMAGITGKQAAE"
     gene            2802..3932
                     /locus_tag="VHZ56_06605"
     CDS             2802..3932
                     /locus_tag="VHZ56_06605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018426101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4297677.1"
                     /translation="MSARRPLPRWADVALLPFLNLVLAMIVSGILVLIIGQNPLTALQ
                     IMVYGAFGNGEGLGYTLHFAVDFIFTGLAVAVGAHAGLFNIGGEGQAYIAGLGAIGVG
                     LLLDHTSWILVLPLAILASAALGGFFAFIPGYLQAKRGSHVVITTIMFNFIASAVMVY
                     LLNYVLKPKGAMEPSSFGVTGAGLIPQLREWIPALGYAPLNVTVIFAVLALIFVYVLI
                     WHTKLGFAMRTMGHNAGASRYAGISNSRLIMIVMTISGALAGMTAVNEVLGQQGKLVL
                     DITTGYGFVGIAVALMGRNHPVGIALAAILFGALYQGGLELQFSMPAITRDMIVVIQA
                     LVILFTGAMEGLLRPGLESAFMIYAPKQRDEAAARETATTES"
     gene            3940..>4904
                     /locus_tag="VHZ56_06610"
     CDS             3940..>4904
                     /locus_tag="VHZ56_06610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018426102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4297678.1"
                     /translation="MTYDIIVSMLAATLRLTTPLLLACLAGLYSERSGVFDIGLEGKM
                     LAGAFGAAAVAVVTGSAWLGLLAAIIVSIGMALLHAVASITLKGNQIISGVAINFLAQ
                     GLTAVLGLALFHQGGRTPPPPDSGRFQSIILPYADQIGHVPIIGPIYTLMISGQNILV
                     YFAFIAVPITYWVLYRTRFGLRLRAVGENPKAVDTAGISVTFMRYRALIITGVLCGIA
                     GAYFSIAQGSGFVNNMTAGKGYIALAALIFAKWRPVPAMFATLLFGFLDALQIRLQGV
                     PLPLVGPIPVQFIQALPYVLTVVLLAGFIGKAIGPKAGGVPYTKER"
BASE COUNT          810 a         1702 c         1513 g          879 t
ORIGIN      
        1 ggcttctttg cttcgatcgg tgccgagatg ggagcggtcg tgacagcgtt gccgcgggag
       61 aatctgccgc accgtttttg accaaacgtt caaaaactcg ggttttccct cttgccgcgc
      121 accaaaatgc aagcttgtat cgttgccaac gcgcgagggc ttgtcacgcg gcaccgccgc
      181 tcctcccgcg atacagggag actttttcat gaccagattc actcggcact tcggtgctct
      241 ggcggtcggt gttgccgccg ccgccctgat ggcgggcgcc gccctcgcgg acccggcgat
      301 catctatgat ttgggcggca aattcgacaa gtcgttcaac gaggccggct tcaacggcgc
      361 cacgcaatgg gccaaggaca ccggcggcaa attccacgat ctcgagctgc agaacgacgc
      421 gcagcgcccc gaggccatcc gcaagatggc gtcggcgggc tacagcccga ttgtgcttcc
      481 gggctttgcc tggaccgata cgctgaccaa ggtcgcgccg gagtttccca agatccattt
      541 cgtgctgatc gattcggtcg tcgacgcgcc caatgtgatg tcggtggtct acaagtcgaa
      601 cgatgcgtcg tatctcgccg gcgtgctcgc cgccaagaag tcggcgaccg gcaaggtcgg
      661 tttcgtcggc ggcatggaca tcccgctgat ccacgccttc ttctgcggct acctcgaagg
      721 cgtgatggac accaacccgc aggcccaggt gttcgagaac tacaccggca ccacgcctga
      781 cgcgtggaac aacccggtcg gcgccggcga gctcgccaag gccgacttcg acaagggcgc
      841 cgacatcgtc tacgccgccg ccggcggttc gggcctcggc gtgctgcagg ccgccaagga
      901 tgccggcaag ctctcgatcg gcgtcgacag cgaccagaac tacatccagc ccggctcggt
      961 gctgacttcg gtgctgaagc gcgtcgacgt caccacctac gacgccttca aggacgatgc
     1021 cgacttcaag gccggcacgg tcgtgcaggg cctcgccgaa aagggcgtcg gcctcgccat
     1081 ggacgactac aacaagccgc tgctgaccgc cgacctgacc aaggccgtcg atgacgcgca
     1141 ggccaagatc atcgccggca ccatcaaggt gcacgactac accaccgaca gcgcctgccc
     1201 gcaaaacagc ggctcgtgac cgatcccgta tcgaacgacg acaaatcgca gcggccctcc
     1261 ggggccgctg cttccgcatc ggcgatcgag cttaggaaga tcaacaagcg cttcggcccg
     1321 gtctgggcga accgcgacat cgatctcgcc gtcaagcgcg gcaccatcca tggcatcgtc
     1381 ggcgagaacg gcgccggcaa gtcgacactg atgtcgatct tgtacggctt ctacaccgcc
     1441 gacagcggcg agatttacgt caacggcaag ctcgagcaca tcaccgattc ccgtcacgcg
     1501 ctggcgctcg gcatcggcat ggtgcaccag cacttcatgc tggtcgataa tttctccatc
     1561 ctcgagaacg tcatcctcgg tgtcgagggc ggcggcctcc tggcgccatc gttggcgcgg
     1621 gcccgcaagg agctcaagcg cctcgccgac gaatacggcc tcgatgtgca ccccgacgcc
     1681 atcgtccagg acgtctcggt cggccagcag cagcgcgtcg aaatcctcaa ggcgctctat
     1741 cgcggcgccg acacgctgat cctcgatgaa ccgaccggcg tgctgacgcc ggctgaggcg
     1801 gacgatctgt tccgcgtcct ccatctgctg cgcgagcagg gcaagaccgt catcctcatc
     1861 actcacaagt tgcgcgagat catggccatc accgacaccg tgtcggtgat gcggcagggc
     1921 cagatggtcg gcaccatgcc gacctcggaa acctcgcccg agcgcctcgc cgagctgatg
     1981 gtcggccgcc gcgtgctgct gcgtgtcgaa aaaggcccgg cgcatccgcg ccagcctttg
     2041 ctcgaagtcc gcaacctggt ggttgccgat gatctcaggg tgccgcgtgt caaggatgtg
     2101 agcttcaccg tccgcgctgg cgagattgtc ggcatcgccg gggtggccgg caacggccag
     2161 tccgagctgc tcgaatcgat cgccggcatg cgcgaccagc agtccggcga ggtgctggtc
     2221 agcggcaagc cgcttgccat ccgcggcgac gacggagccg cccgggcccg ccaggccggt
     2281 ctggcgcacg tccccgagga tcgccaggcc gagggcctcg ttgtccagtt cgaggaatgg
     2341 gagaacaaca ttctcggcta ccaggacgat ccggcctatg gccgtggcgc catcctcgac
     2401 atcgccgcgg cgcgccggca ggcggccgag cggatggaaa agttcgacgt ccggccggcc
     2461 aacccccggt tgaagaccgc gagcttttcc ggcggcaacc agcaaaagat cgtgctggcc
     2521 cgcgagatgg aacacaatcc cgacgtcctc gtcgtcggcc agcccacccg cggcgtcgac
     2581 atcggcgcca tcgaattcat ccacaaccag atcatcaaga tgcgtgacgc cggcaaggcc
     2641 atccttctca tttcggtgga gctcgacgag atccgctcgc tctccgaccg catcctcgtc
     2701 atgttcgacg gtcgtatcgt cggcgaggcc gacccggcgg tcgccaccga aggcgagctc
     2761 ggcctgatga tggccggcat caccggtaag caggccgccg aatgagcgcc cgccgcccac
     2821 tgccgcgctg ggccgacgtg gcgctgctgc cattcctgaa tctcgttttg gcgatgatcg
     2881 tctccggcat cctcgtgctg atcatcggcc agaatccgct gactgccctg cagatcatgg
     2941 tctacggcgc cttcggcaat ggcgaggggc tgggctacac cctgcacttc gcggtcgatt
     3001 tcatcttcac cggcctcgcc gtggcggtcg gcgcacatgc cggcctgttc aatatcgggg
     3061 gcgaggggca ggcctacatc gccgggctcg gtgccatcgg cgtcggcctg ctgctcgatc
     3121 acaccagctg gattctcgtg ctgccgctgg cgatcctcgc ctctgccgcg ctcggcgggt
     3181 tcttcgcgtt catccccggc tacctgcagg ccaagcgcgg cagccacgtc gtcatcacca
     3241 ccatcatgtt caacttcatc gcctcggcgg tgatggtcta cctgctgaac tacgtgctga
     3301 agcccaaggg ggcgatggag ccctcgagct tcggcgtcac cggcgccggg ctcatcccgc
     3361 agctgcgcga gtggatcccg gcgctcggct atgctccgct caacgtcacc gtcatcttcg
     3421 cggtgctggc gctgatcttc gtctacgtgc tgatctggca caccaagctc ggcttcgcca
     3481 tgcgcaccat ggggcacaac gccggtgcct cgcgctatgc cggcatttcc aactcgcggc
     3541 tgatcatgat cgtgatgacc atctccggcg cgctcgctgg catgaccgcg gtcaatgagg
     3601 tgctcggcca gcagggcaag ctcgtcctcg acatcaccac cggctacggc ttcgtcggca
     3661 ttgccgtggc gctgatgggc cgcaaccacc cggtcggcat cgcgctcgcc gccatcctct
     3721 tcggtgcgct ctaccagggc gggctcgaac tgcagttctc gatgccggcg atcacccgcg
     3781 acatgatcgt ggtgatccag gcgctggtga tcctcttcac cggcgccatg gaggggctgc
     3841 tgcggccggg actggaatcg gctttcatga tctacgcccc caagcagcgc gacgaggccg
     3901 ccgcgcgcga aaccgccacc accgagagtt gagcgcccga tgacctacga tatcatcgtc
     3961 tcgatgcttg cggcgaccct gcgcctgacg acgccgctgc tgctcgcctg cctcgccggc
     4021 ctctactccg agcgctccgg cgtgttcgac atcgggctcg agggcaagat gctggccggc
     4081 gccttcggcg ccgccgcggt cgctgtagtg accggcagcg cctggctcgg actgctcgcg
     4141 gcgatcatcg tgtcgatcgg catggcgctg ctgcacgcgg tggcatcgat caccctcaag
     4201 ggcaaccaga tcatctctgg tgtcgccatc aattttctcg cccagggcct caccgcggtg
     4261 cttggactgg cgctgttcca ccagggtggc cgcacgccgc cgccgccgga cagtggccgc
     4321 ttccagtcga tcatcctgcc ctatgccgat cagatcggcc acgtgccgat catcgggccg
     4381 atctacacgc tgatgatctc cggccagaac attctcgtct acttcgcctt catcgccgtg
     4441 ccgatcacct actgggtact ttatagaaca cggttcgggc tgcgcctccg cgcggtcggt
     4501 gaaaacccca aggcggtcga taccgccggc atctccgtga ccttcatgcg ctatcgggcc
     4561 ctgatcatca ccggcgtgct ctgtggtatc gcaggggcct acttctcgat cgcccagggc
     4621 tcgggcttcg tcaacaacat gaccgccggc aagggctaca tcgcgctggc ggcgttgatc
     4681 ttcgcgaaat ggcggccggt gccggcaatg ttcgcgacgc tgctcttcgg cttcctcgat
     4741 gcgctccaga tccggctgca gggcgtgccg ctgccgctgg tcggaccgat cccggtgcag
     4801 ttcatccagg cgctgcccta tgtgttgacc gtcgtgctgc tggcgggctt catcggcaag
     4861 gcgatcggcc ccaaggccgg cggcgtgccc tacacgaagg aacg
//
LOCUS       DATAZA010000263         3221 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1188199, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000263 DATAZA010000000
VERSION     DATAZA010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3221
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1188199"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1381
                     /locus_tag="VHZ56_06615"
     CDS             <1..1381
                     /locus_tag="VHZ56_06615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007797747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEX4297679.1"
                     /translation="VLLEGYPPPADPRLNVIRVAPDPGVIEVNIHPAANWDEAVATTT
                     IVYEEARQSRLGADKFMIDGKHVGTGGGNHVVVGGATPSDSPFLRRPDLLKSLVLHWQ
                     HHPSLSYLFSGLFIGPTSQAPRIDEARHDNLYELEIAIGQVPAPGQGVPPRPWLTDRL
                     FRNLLVDVTGNTHRAEICIDKLYSPDGPTGRLGLVEFRGFEMPPNARMNLAQQLLVRA
                     LIARFWQSPLDGRFIRWGTTLHDRFMLPHFVWADFLDVLADLRQHGFDLDPEWFAAQL
                     EFRFPFCGEVEAAGMTLTLNQALEPWHVMGEQGAIGGTVRFVDSSVERLQVTLAGPDP
                     DRYVVACNGRRVPLTATQTAGTSVAGVRFKAWQPASGMHPALPVNAPLTFDIYDTWTG
                     RAVGGCVYHAAHPGGRNYETFPVNGNEAEARRLSRFVAEGHTPGDYSPPAEEMPDEFP
                     LTLDLRRPL"
     gene            complement(1400..2371)
                     /locus_tag="VHZ56_06620"
     CDS             complement(1400..2371)
                     /locus_tag="VHZ56_06620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010660371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HEX4297680.1"
                     /translation="MTTPQTPIHSGFGAASTAEDVIKGRDLSGKVAVVTGGSAGVGLE
                     TTRVLVGAGATVVVPARDVAKARTGIAGLERVEVLPMELSDPASIDRFAAAVAARHPA
                     IHILINNAGIMAPPLERDARGNELQFSTNHLGHFQLTGQLWPVLVAAQGARVVELSSR
                     GHQRQGVDFDDPNFERHPYERWAAYGQSKTANALFAVELDKRGAAHGVRAFSVHPGGI
                     ITGLAKFMTAEERARSPHFGADGKPVIDPERNMKTVEQGAATSIWCATSPQLDGMGGV
                     YCENCDISPATAADSTDQLGVRPWATDAAAADRLWTLSETLTGVKFP"
     gene            2466..>3221
                     /locus_tag="VHZ56_06625"
     CDS             2466..>3221
                     /locus_tag="VHZ56_06625"
                     /inference="COORDINATES: protein motif:HMM:NF024260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX4297681.1"
                     /translation="MAADPLSDILALLDARCVLGGGLVAGGRWVRHFAQPNAIKVMAQ
                     IEGACWLVVDGLPAPIRLATGDVIVVNGKHALTMASDPEMLATADNSPTVQHVDDITR
                     VGEGREFFMLGGHVAIDPTGQSLLLDVLPPLVHIRADSAEAGAVRWLLDQLAREWTGH
                     LPGAATATAQLAQLLFVQALRAHLRMEGPAASGWLNGLGDGRIAPILGLIHADPARTW
                     TLIELAKAAGMSRTGFAQRFRAVVGVAPLAYLTR"
BASE COUNT          499 a         1152 c         1039 g          531 t
ORIGIN      
        1 ggtgctgctc gagggctatc cgccgccggc cgatccgcgc ctcaacgtca tccgcgtggc
       61 gcccgatcca ggggtgatcg aggtcaacat ccaccccgcc gccaactggg acgaggccgt
      121 agcgacgacc acgatcgtct acgaggaggc ccggcagagc cggctcggcg ccgacaagtt
      181 catgatcgac ggcaagcatg tcgggaccgg cggcggcaac cacgtggtgg tcgggggcgc
      241 aacgccctcg gactcgccgt tcctgcgccg gccggatctc ctcaaatcgc tggtgctgca
      301 ctggcagcat cacccgtcgc tgagctacct gttctcgggc ctgttcatcg gcccgacgtc
      361 gcaggcgccg cgcatcgacg aggcgcggca cgacaatctc tacgagctgg agatcgccat
      421 cgggcaggtg ccggctcccg gacagggcgt gccgccccgc ccctggctca ccgaccggct
      481 gtttcgcaac ctgctggtcg acgttaccgg caacacccac cgcgcggaaa tctgcatcga
      541 caagctgtat tcgccggacg gcccgaccgg acggctcggg ctggtggagt tccgcggctt
      601 cgagatgccg cccaacgcgc gcatgaacct tgcccagcaa ctgctggtgc gggcgctgat
      661 cgcgcggttc tggcaaagcc ccctcgacgg caggttcatc cgctggggca cgacgctgca
      721 cgaccgcttc atgctcccgc atttcgtctg ggccgatttc ctcgacgtgc tcgccgacct
      781 gcgccagcac ggcttcgacc tcgatccgga atggtttgcc gcgcagctcg aattccgctt
      841 tcccttctgc ggcgaggtcg aggcggccgg gatgacgctg accctcaacc aggcgctcga
      901 gccatggcac gtgatgggcg agcagggtgc gatcggcggc accgtgcggt tcgtcgacag
      961 ctccgtcgag cggctgcagg tgacgctggc gggccccgac cccgaccgct acgtcgtcgc
     1021 ctgcaacggt cgccgcgtgc cgctgaccgc gacgcaaacc gccggaacct cggtcgccgg
     1081 cgtccgcttc aaggcctggc aaccggcgag cggcatgcac cccgccctgc ccgtgaacgc
     1141 gccgctgacc ttcgacatct acgacacctg gaccggacgt gccgtcggcg gctgcgtcta
     1201 tcacgccgcc catccgggcg gccgcaacta cgaaaccttc cccgtcaacg gcaacgaagc
     1261 cgaggcccgc cgcctctcgc gcttcgtcgc cgagggtcat accccgggcg attattcacc
     1321 accggccgaa gaaatgccgg atgaattccc gttgactctg gatctgcgcc gcccgctgta
     1381 acgccgttac agcgatggct cagggaaatt tcactcccgt cagcgtctcg ctcaacgtcc
     1441 acagccgatc ggccgcggcg gcgtccgtcg cccatggccg gacgccgagc tgatcggtcg
     1501 agtccgccgc ggtcgccggc gaaatatcgc agttctcgca atataccccg cccatcccgt
     1561 cgagttgcgg gctcgtcgcg caccagatcg aggtggcggc gccctgctcg accgtcttca
     1621 tgttgcgctc cgggtcgatc accggcttgc cgtcggcgcc gaagtgcggc gatcgagccc
     1681 tttcctcggc ggtcatgaat ttcgccagcc cagtgatgat gccgcctgga tgcacggaaa
     1741 aggcccgtac gccatgcgcc gcgccgcgct tgtcgagctc caccgcgaac agcgcgttgg
     1801 cggtcttgga ctggccgtag gcggcccagc gctcgtacgg atggcgctcg aaattcggat
     1861 cgtcaaaatc gaccccctgc cgctggtgtc cgcgcgacga cagctcgacg acgcgtgcgc
     1921 cctgcgccgc gaccagcacc ggccagagct gtcccgtcag ctggaaatgg cccagatgat
     1981 tggtcgagaa ttgcagttcg ttgccgcgtg cgtcgcgctc gagcggcggc gccatgatac
     2041 cggcattgtt gatgagaatg tggatcgctg gatgtcgggc ggccaccgcc gccgcgaagc
     2101 ggtcgatcga cgccggatcg ctgagctcca tcggcagcac ctcgacccgc tcgagccccg
     2161 cgattcctgt ccgcgctttc gcgacgtcgc gggccggaac gacaaccgtg gccccagcac
     2221 ccaccagcac ccgcgtggtt tcaagtccga cgccggccga gccgccagtg acgacggcga
     2281 ccttgccgga aagatcccgg cccttgatga catcttcggc tgtcgaagcg gcgccgaagc
     2341 cggaatggat cggggtttgc ggggtggtca tcgctgtctc cttgactgct cgtgacgaac
     2401 acctaaggtc agatcgccgg actttgaata acccggcatc cagataatct gcgcgatcgt
     2461 tcagaatggc tgctgatcca ctctctgata tccttgctct gctcgatgcc cgctgcgtgc
     2521 tcggcggcgg cctggtcgcg ggcggccgct gggttcgtca cttcgcacaa cccaacgcga
     2581 tcaaagtaat ggcgcagatc gagggcgcat gctggctggt ggtggacggc ctgccggcgc
     2641 cgatccggct cgcaacgggc gatgtgatcg tcgtcaacgg caagcacgcg ctgacaatgg
     2701 ccagcgaccc cgagatgctc gcaacggcgg acaattcgcc gaccgtccag cacgtggacg
     2761 acatcacccg ggtcggcgag ggccgcgagt tcttcatgct gggtggccac gtggcgatcg
     2821 acccgacggg tcagagcctg ttgctcgatg tcctgccgcc gctcgtccac atccgcgccg
     2881 acagcgccga ggccggtgcg gtacgctggc tgctcgacca gttggcgcgc gaatggaccg
     2941 gccacctgcc cggcgccgcg accgccacgg cgcaactggc gcaattgctg ttcgtgcagg
     3001 cgctgcgcgc ccacctcagg atggagggcc cggccgcgtc cggctggctc aacggcctcg
     3061 gcgacgggcg catcgccccc atcctcgggc taatccacgc cgaccctgcg cggacctgga
     3121 cactgatcga gttggcgaaa gccgctggca tgtctcgcac cggcttcgcc cagcgcttca
     3181 gggcggtcgt cggggtcgct cccctggctt acctgacccg g
//
LOCUS       DATAZA010000264         4385 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1768945, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000264 DATAZA010000000
VERSION     DATAZA010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4385
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1768945"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..754
                     /locus_tag="VHZ56_06630"
     CDS             <1..754
                     /locus_tag="VHZ56_06630"
                     /inference="COORDINATES: protein motif:HMM:NF016894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-dehydro-3-deoxygalactonokinase"
                     /protein_id="HEX4297682.1"
                     /translation="DRLGGVAAPIDVVVCGMAGARQGWMEAPYLDAPANLNALSHGAV
                     RPEGADRRLAPRILPGVAQRTAGREDVMRGEETQLLGLLALQPGFEGTAILPGTHSKW
                     VELGGGRIVRFSSAMTGEIYEVLSQHSVLRHSFAGETDGPATEDGVAAGLSAGLEHPE
                     LFTALAFRTRAAMLLGGKGPDWCSGYLSGLLVGTEIGGHRDWLGSGPVPLVGSARFGR
                     LYGAALTMIGIASFSVDAADATIAGLKQARAQ"
     gene            730..1359
                     /locus_tag="VHZ56_06635"
     CDS             730..1359
                     /locus_tag="VHZ56_06635"
                     /EC_number="4.1.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011424202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008674 -
                     2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity
                     [Evidence IEA];
                     GO_process: GO:0034194 - D-galactonate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxy-6-phosphogalactonate aldolase"
                     /protein_id="HEX4297683.1"
                     /translation="METGPSPMRREIIAILRGVTPAEILDVGHALVDAGITVIEVPLN
                     SPEPLQSIAAAAKAFAGHAEIGAGTVLTPEDVEAVNAAGGQLIVSPDTNEAVIRRTRE
                     LGMASYPGIFSPSDAFRAIRAGATGLKFFPAEVLGPKGIKAMRAVLPPALPLYAVGGA
                     SPENFREYFDAGCAGFGLGSYIFKPGMGMAEIASRARAAVAAYDEGKRP"
     gene            1356..2234
                     /locus_tag="VHZ56_06640"
     CDS             1356..2234
                     /locus_tag="VHZ56_06640"
                     /EC_number="3.1.1.99"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX4297684.1"
                     /translation="MSDTAELFIDCRCELGEGVFWHPLQERLFWFDILNKTLFSATEG
                     GIMVDRFTFETPVTAAGVIDADNLAIASAAGIYRLTLSTDTRELIVPLDPTSTTTRSN
                     DGRVGPSGAFWIGTMGLKDPAHVAAGALYHVRAGEVTTLLSDIHIPNATCFAPDGRTA
                     YFTDGVTRLIRKVATDRETGLPTGPWQDFARVEAPAEPDGAVVDSEGYVWNAQWAAGK
                     VLRFAPDGRVDRVVKVPVSRPTCPAFGGKDLKTLYITTARQGMTPAELDREPLAGSLF
                     ALRVDVPGLPENIARL"
     gene            complement(2231..4243)
                     /locus_tag="VHZ56_06645"
     CDS             complement(2231..4243)
                     /locus_tag="VHZ56_06645"
                     /inference="COORDINATES: protein motif:HMM:NF015714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HEX4297685.1"
                     /translation="MASAAAALEQRRLFVLLPFAMIAGLIGSVSLPQDPPPIVLVSGA
                     AVLVGALAVSLRTLVRLRLLTLAVSFWAGLCLLPIHGALFGTPMLARPAYGAYQARVD
                     EIVSDAPGEQRVVISGIAPTAGDRAVPVRRARVLIKNGPELAPGDVIGGSFRFAQVPG
                     PVFPGGFDTQFHDYFEGIGAYGNSIHPPTVVAAGDPSAPGRLIDTIRRGIASRIDAVL
                     PQPSAGVARAIINGDESNVTDEVRTTMATAGIAHVLSVSGLHLSIVAGGVFWVLRLLL
                     AGFDGIASRVPVKRLAALGGMAAASFYFTISGGNVAAFRSTLMILLVFGAVLFGRRAL
                     TMRNVAIAGIIVVAMAPADVFRPSFQLSFAAVVALVGAYEILRGSGGRDASLFTHVVG
                     YVRGIIITSLVAGTATVLFSIYHFQQTSPLGVLGNLGTLPLVGFIMMPAAVVAVLAMP
                     LGLERPFLLAMGWSVDRMLDMAGVVASWSAYLRASPLLTPAALVIGLGALCWFAFFKD
                     RWRLLGPAIAVPLVVLFAVDRPPDVLISDTTQAMAVRGSTGLELAAGRPQSFALDVWR
                     QTYADPIATPADEQCDSLACVGKSAAGFSYAIVKDPAGFGEECGNSDLIVTRQKAPSY
                     CTQGVVIDAPELAAHGVHWLRWNAGAHAFEVRAAIPDLNRPWRVPS"
BASE COUNT          709 a         1588 c         1474 g          614 t
ORIGIN      
        1 cgacaggctc ggtggcgtgg ccgcgccgat cgacgtcgtc gtctgcggca tggccggcgc
       61 ccgtcagggc tggatggagg cgccatacct cgacgcgccc gcaaacctca atgcgctgag
      121 ccacggcgca gtgcggccgg aaggtgccga ccgacggctc gcccctcgta tcctgcccgg
      181 cgttgcgcag cgcaccgccg gacgcgagga cgtcatgcgt ggcgaggaga cgcagctcct
      241 cggtctgctg gcgctgcagc ccggcttcga gggcaccgct atccttcccg gcacgcactc
      301 gaaatgggtg gaactcggcg gtggccgcat cgtccgcttc tcgtccgcca tgaccggcga
      361 gatctatgag gttctgtcgc agcactcggt gcttcggcac tccttcgcgg gagagaccga
      421 cggaccggcg accgaggacg gcgtggccgc cggattgtcg gccgggctcg agcatcccga
      481 gctgttcacc gctctcgcct ttcgcacccg cgccgccatg ctgctgggcg gcaagggccc
      541 cgactggtgt tccggctacc tttccggcct gctggtcggc accgagatcg gcggccatcg
      601 cgactggctg ggcagcggtc cggtgccgct ggtcggttcc gcgcgcttcg ggcgcctcta
      661 tggcgccgcg ctcacgatga tcggcatcgc cagcttctcc gtcgatgccg cggacgccac
      721 cattgccgga ttgaaacagg cccgagccca atgagacgag aaatcatcgc catcctccgg
      781 ggcgtgacgc cggcggaaat cctcgatgtc ggccacgcgc tggtcgacgc cggcatcacc
      841 gtgatcgagg taccgctcaa ttcccccgag ccgctgcagt cgatcgcggc ggcagcgaag
      901 gcctttgccg gacacgcaga gatcggcgcc ggtaccgtgc tcacgcccga agacgtggag
      961 gcggtgaatg ccgccggcgg ccagctgatc gtgtcccccg acaccaacga ggcggtgatc
     1021 cgccgcaccc gcgagctggg gatggcctcc taccccggta ttttctcccc ctccgatgcc
     1081 tttcgcgcca ttcgcgccgg ggcgaccggc ctcaaattct tccctgccga agtcctcggc
     1141 cctaagggca tcaaggcaat gcgcgcggtc ctgccgccgg cgctgccgct ctatgctgtc
     1201 gggggcgcga gccccgagaa tttccgggag tatttcgacg cagggtgtgc cggcttcggg
     1261 ctgggcagct atatcttcaa gccgggcatg ggcatggcgg agatcgccag ccgcgcccgc
     1321 gccgcggtgg cggcttatga cgaaggaaaa agaccatgag cgacacggcc gagctgttta
     1381 tcgactgccg ctgcgagctg ggcgaaggcg tgttctggca tccgctgcag gagcggctgt
     1441 tctggttcga catcctcaac aagacgctgt tctcggccac cgagggcggc atcatggtcg
     1501 accgcttcac cttcgaaaca ccggtgaccg ccgccggcgt gatcgatgcc gacaacctcg
     1561 ccatcgcgtc cgctgccggc atctaccggc tgacgctttc gaccgacacg cgcgagctca
     1621 tcgtgccgct cgatcccacc agcaccacca cccgttccaa cgacggccgg gtcggcccct
     1681 cgggcgcctt ctggatcggc acgatgggcc tcaaggatcc ggcgcacgtc gcggcagggg
     1741 cgctctatca cgtccgcgcc ggtgaagtga ccacgctcct cagcgacatc catatcccca
     1801 atgccacctg tttcgccccc gacgggcgga ccgcctactt caccgacggg gtgacgcggc
     1861 tcatccggaa agtcgcgacc gaccgcgaaa ccggcctgcc gacgggcccc tggcaggatt
     1921 tcgcgcgggt cgaggcgccg gccgagccgg atggcgccgt ggtcgattcc gaggggtatg
     1981 tgtggaacgc ccagtgggcc gccggcaagg tgctccgctt tgcgcccgac ggtcgcgtcg
     2041 atcgcgtcgt caaggtgccg gtgagccggc ccacctgccc ggctttcggc ggcaaggacc
     2101 tgaagacgct ctacatcacc accgcccgcc aggggatgac tccggcagag ctcgaccgcg
     2161 agcccctcgc cggcagcctg tttgcgctgc gcgtcgacgt cccgggcctg cccgagaaca
     2221 tcgcccgtct ctaggacggc acgcgccacg gacggttgag gtcggggatc gccgcgcgca
     2281 cctcgaacgc atgcgccccg gcgttccagc ggagccagtg gacgccgtgc gccgccagtt
     2341 ccggcgcgtc gatgaccacc ccctgcgtgc agtagctcgg cgccttctgc cgcgtcacga
     2401 tcaggtcgga attgccgcac tcctcgccga agccggcggg gtccttgacg atggcgtagc
     2461 tgaacccggc cgcgcttttg cccacgcagg cgagggaatc gcactgctcg tccgccggcg
     2521 tcgcaatcgg atcggcatag gtctgccgcc agacgtcgag cgcaaaactt tgcggccgcc
     2581 ccgctgcgag ttccagcccc gtcgacccgc gcaccgccat cgcctgcgtc gtgtccgaga
     2641 tcagcacgtc gggcggccgg tcgacggcga acagcaccac cagcggcacg gcgatcgccg
     2701 gcccaagcag ccgccagcgg tccttgaaga aggcgaacca gcacagcgcg ccgaggccga
     2761 tcaccagcgc tgccggggtc agcagcgggc tcgcgcgcag atacgcgctc cagctcgcca
     2821 ccacgcccgc catgtccagc atgcgatcga ccgaccagcc catggcgagc aggaatggcc
     2881 gctcgaggcc gagcggcatg gccaggacgg cgaccaccgc cgccggcatc atgatgaagc
     2941 cgacgagcgg cagcgtgccg agattgccga gcacgcccag cggcgacgtc tgctggaaat
     3001 gatagatcga gaacagcacc gtcgccgtcc cggcaacgag gctggtgatg atgatgcccc
     3061 gcacgtagcc gacgacatgg gtgaagaggc tggcatcgcg gccgccggaa ccgcgcagga
     3121 tctcgtacgc acccaccagc gcgaccaccg ccgcgaagct gagctggaag ctcgggcgga
     3181 acacgtcggc aggcgccatc gcgaccacga tgatgccggc gatcgcgaca ttgcgcatgg
     3241 tcagcgcgcg ccgtccgaac agcaccgcgc cgaacaccag gaggatcatc agcgtcgagc
     3301 ggaacgccgc gacgttgccg ccggaaatcg tgaaatagaa cgacgctgca gccatgccgc
     3361 cgagcgccgc cagccgcttg acgggcaccc ggctggcgat gccgtcgaac ccggcgagca
     3421 gcaggcgcag cacccagaac accccgccgg cgacgatcga caggtgcagc cccgataccg
     3481 acagtacatg cgcgatgccg gctgtcgcca tcgtcgtgcg cacctcgtcg gtgacgttgc
     3541 tctcgtcgcc gttgatgatc gcccgcgcca ctccggccga gggctgcggc agcacggcgt
     3601 cgatccggct cgcgatgccg cgccggatgg tgtcgatcag ccggcccggc gccgacgggt
     3661 cgcccgcggc gaccaccgtt ggcggatgga tggagttccc gtacgcgccg atgccctcga
     3721 aatagtcatg gaactgcgta tcgaagccgc cgggaaagac cggcccgggc acctgcgcga
     3781 agcggaagga gccgccgatg acgtcgccgg gcgccagctc cggcccgttc ttgatcagca
     3841 cgcgggcccg ccgcaccggc accgcgcggt cgcccgcggt cggcgcaatc cccgagatca
     3901 ccacccgctg ttcgcccggt gcgtcggaga cgatctcgtc gacgcgggcc tggtaggccc
     3961 cgtaggccgg tcgcgccagc atcggcgtgc cgaacagggc gccatggatc ggcagcaggc
     4021 agaggccggc ccagaacgaa acggcgagcg tcagcagccg gagccgaacc agggtccgca
     4081 gcgaaacagc cagggccccg accagcacgg cggcccccga aaccagcacg atcggtggcg
     4141 gatcctgcgg caggctcacc gagccaatca gcccggcgat catggcgaag ggcagcagca
     4201 cgaacagccg ccgttgctcg agcgccgccg cggcgcttgc cacgaggctc ttgaagggtg
     4261 atggccgggg cgccgcacgc ggcacggacg caggctgcag gacgcgccgc tcaggcggcg
     4321 gtccagtcag aatgtccccg gtttccaggg tttccgacat gagccccctg cccttgcgat
     4381 ccccg
//
LOCUS       DATAZA010000265        13712 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_143783, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000265 DATAZA010000000
VERSION     DATAZA010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 13712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13712
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143783"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..1398)
                     /locus_tag="VHZ56_06650"
                     /pseudo
     CDS             complement(1..1398)
                     /locus_tag="VHZ56_06650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006162316.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit alpha"
     gene            complement(1857..2330)
                     /gene="dps"
                     /locus_tag="VHZ56_06655"
                     /gene_synonym="pexB"
     CDS             complement(1857..2330)
                     /gene="dps"
                     /locus_tag="VHZ56_06655"
                     /gene_synonym="pexB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016722 - oxidoreductase activity, acting
                     on metal ions [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein Dps"
                     /protein_id="HEX4297686.1"
                     /translation="MKSPDIGIASNTKTEMIALLNARLAEAIDLALITKQAHWNLKGP
                     TFIAVHEFLDEVREDVDEHVDIIAERIAQLDGIANGTVQEVAKATSLPPYPTDIRKVE
                     DHLKALVGHFGAVSKTARAAIDKADDADDADSADILTAYSRMLDKNLWFLKSHLE"
     gene            complement(2552..3004)
                     /locus_tag="VHZ56_06660"
     CDS             complement(2552..3004)
                     /locus_tag="VHZ56_06660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012709372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HEX4297687.1"
                     /translation="MQTYDFTPFYRSTVGFDRLFTRLDGLAGQEQKTYPPYNIEKLGD
                     DAYRISIAVAGFALGDLVIESKENSLLVKGAKAPVSEEKSREFLHRGIAERGFDLRFQ
                     LAEYVEVSGASLENGLLHVELKRQLPESKKARTIAISGTAPKTLEAIN"
     gene            3433..4413
                     /locus_tag="VHZ56_06665"
     CDS             3433..4413
                     /locus_tag="VHZ56_06665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX4297688.1"
                     /translation="MQVNASVDPEGPKLAVLASNPAPEGMRAGYFTTPDRVRLRYATF
                     PKTAGAPKGTVCLVHGRTEFIEKYFETVADFQKRGFAVATFDWRGQGGSDRLIRNRTL
                     GYVRHFEDYWLDLKSFHANILLPDCPGPFYLVGHSMGGLVSLIAGTRDRMMFDRIFLS
                     APMVGLDRQPLSFGGMAAIGDTLCALGLGGAPIGRAEDELPSERAFGGNPLTSDFVRY
                     MRTVETWRERPDLIVGKPTFKWAAAAMHAMALVARDRFPLSIKVPVLMLAAARDEVVS
                     TAWTEQLGLRMRTGRHAVIAAARHELFMENDAIRGQVFAAFDAFITEQSA"
     gene            complement(4410..5216)
                     /gene="hisN"
                     /locus_tag="VHZ56_06670"
     CDS             complement(4410..5216)
                     /gene="hisN"
                     /locus_tag="VHZ56_06670"
                     /EC_number="3.1.3.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004401 - histidinol-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphatase"
                     /protein_id="HEX4297689.1"
                     /translation="MTDTGLAGLDPALVRATLLEAAEAAAVLTLAGFRTPLAVENKWQ
                     HGFDPVTAADRDAEIAIRAVLAARFPDHGIIGEEWDPKAAAGAFDWIVDPIDGTRAFI
                     SGVPVWGTLIGLMHHGRAVAGLMAQPFTGETYLGLAGASFYTRGGDSRQIHTSGVTEL
                     ARAKVTATSPDIFEQAGTVANINRLRAATLQCRWGLDCYGYCLLAAGHIDIVAESALK
                     NVDIAPLIPIIENAGGIVTTWDGGPAEAGGNCVAAATPELHAAAMKVLRG"
     gene            complement(5514..6407)
                     /locus_tag="VHZ56_06675"
     CDS             complement(5514..6407)
                     /locus_tag="VHZ56_06675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HEX4297690.1"
                     /translation="MRSDYWDRPAFETIRPRRLTAPIVFNSAHSGRDYPERFLGMTRL
                     DQLSIRQSEDAYVDELFGRAPHLGTPFLRAHFPRAYLDVNREPWELDPQMFVEPLSDR
                     FNTTSPRVAAGLGTLARVVAENKPIYRERLTIEDARMRIEGIYLPYHATLQRLLSDAV
                     GMFGVAVLIDCHSMPRIARSGDRASPDIVLGDRYGTTCAAGLVDLCEMVFAGAGLRVA
                     RNRPYAGGFIARTYGRPQHGIHALQIEIGRHLYMNEVTLERSEGFNAIRQLAERLTLA
                     LIGYDLSLLTGPQHLPAKAAE"
     gene            6555..6914
                     /locus_tag="VHZ56_06680"
     CDS             6555..6914
                     /locus_tag="VHZ56_06680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006932209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4297691.1"
                     /translation="MKRILLAEDDTDMRQFLTRALKNAGYDVVSFDNGRSAYERLREE
                     PFSLLLSDIVMPEMDGIELARRATELDPDLKVMFITGFAAVALNPDSEAPKDASVLSK
                     PFHLKDLVNEVERLLAA"
     gene            7011..7085
                     /locus_tag="VHZ56_06685"
     tRNA            7011..7085
                     /locus_tag="VHZ56_06685"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7043..7045,aa:Val,seq:gac)
     gene            7126..7200
                     /locus_tag="VHZ56_06690"
     tRNA            7126..7200
                     /locus_tag="VHZ56_06690"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7158..7160,aa:Val,seq:cac)
     gene            complement(7203..8243)
                     /locus_tag="VHZ56_06695"
     CDS             complement(7203..8243)
                     /locus_tag="VHZ56_06695"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4297692.1"
                     /translation="MTAFPTSLPTPRLAAPLRGGPVLRWGVLAPGDIAKDFVHAMHTH
                     TDQRAVAVASRSLDRARAFAQKNNILHAYDDHRAVIEHKDVDIVYVAAPHSEHKRLAL
                     MAIAAGKPVLIEKPIALTAADAREIRDAARAANVFAMEAMWTRYLPQTDVMVQLRDDG
                     VLGDLRLVIADFGTRGNTDPEGRIYNPALGGGALLDLGIYPVWFSQLWLGKPQQVITS
                     GSKTATGVDAQTAIVLSYGSGAQALLSTNLLAFSPARASLSGTAARIEVNPWMAVPAG
                     FELVQPGKGDVRLQFVNDTPLQFRDGLAWEAAAVASHVAEGLKDSPLHPLDFAIATME
                     TMDAIRRQLGTW"
     gene            8448..9542
                     /locus_tag="VHZ56_06700"
     CDS             8448..9542
                     /locus_tag="VHZ56_06700"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4297693.1"
                     /translation="MADSLGVVMVGCGGIARSHAFALSKVPNAKLLVSVDIDEAAAKR
                     FKDRFGFESYSTDLAAALARKDVGAVVITTSSKSHGPLIIQALAAGKHVLVQKPMTAS
                     VAESRAAVELAKKKGLKLMVSFFELFLPPVERAKQIIDKGLIGTPFLFKAIMAWHTPD
                     VTAGWRFDPELAGGGVILDGNVHHVSNALYLLGDPKIQSVYAEYGALTADIRVEDTAV
                     ILIRTDKAILEISGSNRLQEPGGATGHFKDQWAVFGTKGTIQWDAAARPTFRVFTADD
                     KALDPLLGNGWVSPKLPVLPPDQREFSMHINGEESPWVPEHQHFVDACLNNTPVRSDG
                     EFGLKTQLILEAAYKSGREGKKLGLEAVGG"
     gene            9542..10312
                     /locus_tag="VHZ56_06705"
     CDS             9542..10312
                     /locus_tag="VHZ56_06705"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX4297694.1"
                     /translation="MARTIIDTHSHIGTTITSGVGQDVATWLKGMDAAGISQAVISTA
                     AGGMQAGGLADTRAMNDLIAGAVRQHPDRFPIGLAGIEVRHGEAGHAEVRRSLNELGL
                     KGMVFHATFEGFSVDSPAFHAVLAAAGSVKALILLHSTPDGRANPTAIAAVAAMFPNL
                     TFILGHPVFTEGQRQQAADAVKANANVHLDLAYQDDPATTEFFVAQVGADRVFYGSDA
                     PYFEPAKVIASIEKARISTVDREKILSGNAQKLIAAFR"
     gene            complement(10322..11248)
                     /locus_tag="VHZ56_06710"
     CDS             complement(10322..11248)
                     /locus_tag="VHZ56_06710"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4297695.1"
                     /translation="MNDRPRFGLIGTGVWPRLVQAPAAAQSDAVSFTSVFGRNALKAE
                     ALAAPFRVRAYSDLGAFLDSVDIVGITLPPAVQPHFALAAARAGKAAILEKPLALDPL
                     EADAIAREFETRELPALVFFTHLLIPRTQAWLNDVATAGGWIAARVDSYSRLLHDEAN
                     PFFGTVAAWRGAAGALWDSGPHSVAMLLTTLGDIVQVSAIRGTGDLKLLTLTHVGGAV
                     SSIALTMDAPTSLPGETALFGAAGKTTLPQSPDWFADSTVAYAGALRLVAGALAEKKV
                     DIAPGVRLGAKVTKVLAAAEQSIATGRRIDLP"
     gene            complement(11255..12172)
                     /locus_tag="VHZ56_06715"
     CDS             complement(11255..12172)
                     /locus_tag="VHZ56_06715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008873584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEX4297696.1"
                     /translation="MKLGILTAAFPTQSLDEVSSWASQSGFSAIEIAVWPAGGKVERR
                     YAGTAHIDVRGLSRSDADRIVDDLAKKGLTISSLAFYPNPLDPDPAVSAAAFEHLRHV
                     IVAADMLRVPVVGTFAGRDKSQSIDANFDRFSKVWPDLVHFAGDHGIKIAIENCPMIF
                     SGDEWPGGNNLAYSPANWRRMFEIIPDDNFGLNFDPSHLVWQFIDIPRAIREFGKRIF
                     HAHAKDLEVRRDGLYEQGVMSAGVGWQVPRLCGLGDVDWSAFFGALYATGYDHVVSIE
                     HEDRNFEGSVEKVRRGFEIARDNLKPFVH"
     gene            complement(12194..13351)
                     /locus_tag="VHZ56_06720"
     CDS             complement(12194..13351)
                     /locus_tag="VHZ56_06720"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4297697.1"
                     /translation="MKAIADIGAAVVGTGFIGAVHIDAIRRLGATVTGVVGSSAGRAA
                     EKAAQLGVRRAYASYDEMLADPAVDVVHITSPNDDHPAQAAAALRAGKHVVCEKPLAL
                     ASSDTGMLRTLARDTGLVAAVNFNIRFYPLAHEMRARIRSGGIGKPYLVTGAYLQDWL
                     LKPTDWNWRAETGRGGDLRVVGDIGSHWFDLASFVTGSRIVEVMADLPTFLRTRKRPQ
                     GPVETFSGATGGATTDMAMTSEDAAIIVVRFDNGAHGVVTASQVSAGRKNGIVLEVNG
                     AEASLAWAGERPDELWIGHRDRPNELLLRDPGLLSPEAAAIAALPGGHAEGFENGFRA
                     MYRAVYADIAAGRPSPHPAYATFEDGHDEALIVEAVAESARTGQWTTVSRG"
     gene            complement(13388..>13712)
                     /locus_tag="VHZ56_06725"
     CDS             complement(13388..>13712)
                     /locus_tag="VHZ56_06725"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX4297698.1"
                     /translation="VVVECSGSAAAAKACLRSARRGGRYIQVGIFGGEISVPLDQVLY
                     KELVVTSGFASTPKSWKRAMALIEAKLVKLRPLVTRQVPISQWNDAFDAAANGEGIKT
                     VIIPA"
BASE COUNT         2253 a         4368 c         4771 g         2320 t
ORIGIN      
        1 gagcagtgga acgttgctct gcggcgcctg cgacggcacg tcgggcaggt cttcgagcac
       61 gatctgggtg cggcccagcc attgccggta gggctgcgcc tcggcgagct cggccttgat
      121 ctcctcgtcg gagacgatgg cacccttctt caggtcgatc agcagcatct tgccgggctg
      181 caggcgccac ttgcggacga tcttttcggg cgggatgggc agcacgccca tctccgaggc
      241 catgatcacc tggtcgtcgt cggtgacgat atagcgcgcc ggcctcaggc cgttgcggtc
      301 gagcgtcgcg ccgatgtgga cgccgtcgga gaaggccatc gcggcggggc cgtcccacgg
      361 ctcgatcagc gctgcgtggt attcgtagaa ggcgcgccgg ttctcgtcca tcagcgggtt
      421 gccggcccag gcttcgggga tcagcatcat ggcggcatgc ggcagcgaat agccgccgcg
      481 cagcaggaac tcgagcgcgt tgtcgaagca ggcggtgtcc gactggcccg gataggagat
      541 cggccagagc ttctggatgt cggcgccgaa cagctcggac gacaccgagg cctgccgcgc
      601 cgccatccag ttgacgttgc cgcgcacggt gttgatctcg ccgttgtggc agacgaagcg
      661 ataggggtgc gccagccgcc aactcgggaa ggtgttggtc gaaaagcgct ggtggacgag
      721 cgccagggcc gaggagaaat ccggatcgct gaggtcggtg tagtaggcgc gcagctgggc
      781 ggcgaggaac atgcccttgt agaccagcgt gcggcagctc atcgacacga cgtagaagtc
      841 gttcggcttg ccctcgtagg ccgagtagat cttgcccgag cacaccttgc ggatgatgta
      901 gagcttgcgc tcgaacgcct cgtcgtcggc gacgcgggtg ccgcggccga tgaacacctg
      961 ccggtggcac ggctcggtgg cgacgatttc gaacgacttg ctcagcgaag aattgtcatg
     1021 cggcacgtcg cgccagccga gcacgacctg gccctcgtcc tcgatgacct tctcgaccac
     1081 cttctccatc ttcacccgca ggtcgcggtc ctgggggaag aagatgtggg agaccgcgta
     1141 cttgccgggg tcgggcaggg tgatgccctg cgccgccatt tcgcgggcga agaaggcgtg
     1201 tgggatctgc accatgatgc cggcgccgtc gcccatcagc ggatcggcac cgacggcgcc
     1261 gcgatgctcg aggttctcga ggatggcgag gccgttggcg acgatggtgt gggaggcgcg
     1321 gttcttcagg tcgacgatga agccgacgcc gcatgcgtcg tgctcgcggc tggggtcgaa
     1381 caggccgaag gcctccggac gaacggcttt gcgactggcc aggtccgagg ctgggagcga
     1441 tccgttccgt gtctctgcca ttcgcaatgt tccttctcga gggttcgtcg ttcagccggc
     1501 gagccgggtc cgtcctttcg acacgccttg cggccgggtc ctacatggta gggctcagag
     1561 cgctcggcgc aatcctattc attggggagc ggctctgcat ccaaatggcc acccgttcgg
     1621 gctcttcgcc ccgcctcccg tttccgcttt cgacaagcgg gccagccggt ccggcgtgtg
     1681 aaccgtcccg gggagaccgg gcgttcacgc tttaagacag caaagctgtc ctattggact
     1741 tacatttgca taagtccaaa cggcgggcaa gcggcggcgg cgagtttttt gcggcggtgg
     1801 cggcgatgca caaaaggccg gcacgaggcc ggccctgttt cgccaggctg cgacgtctat
     1861 tcgagatggc tcttgaggaa ccacaggttc ttgtcgagca tgcgcgaata ggcggtgagg
     1921 atatcggcgc tgtcggcgtc atcggcatcg tcggccttgt cgatcgccgc gcgggcggtt
     1981 ttgctgaccg ccccgaaatg gcccaccagc gccttgaggt ggtcctcgac cttgcggatg
     2041 tcggtcggat agggcggcag cgaggtggcc ttggcgactt cctgcacggt gccgttggcg
     2101 atgccgtcga gctgggcgat gcgttcggcg atgatgtcga catgctcgtc gacgtcctcg
     2161 cgcacctcgt cgaggaattc atgcacggcg atgaaggtcg gccccttgag gttccaatgg
     2221 gcctgcttgg tgatgagggc caggtcgatc gcctcggcca gccgggcgtt gagcagcgcg
     2281 atcatctccg tcttggtgtt ggaggcgatg ccgatatcgg gggatttcat gatggacctc
     2341 gtgtgacgct gaaaccgggg cagaacccat agcgtggtgc ggcggttccg tcccctgcga
     2401 aaaaggcgcg gatcgtgcga tccgcgcctc gtcaattccg ttcgccggtc cggtcaggag
     2461 gaagagcaca gtccgttgcg ctccggccgg tcggtccgga accgggccga cccgccaacc
     2521 gcctgacggc gcaggccgtt cgtgaccgga atcagttgat cgcttcgagg gtcttgggcg
     2581 ccgtgccgct gatggcgatg gtccgggcct tcttggactc gggcagctgg cgcttcagct
     2641 cgacgtggag caggccgttc tcgagcgagg cgcccgagac ttcgacgtac tcggcaagct
     2701 ggaagcgcag gtcgaagccg cgctcggcaa tgccgcggtg caggaactcg cgggatttct
     2761 cctcggagac cggggccttg gcgcccttga cgagcaggct gttctccttg gactcgatga
     2821 ccagatcgcc cagcgcaaaa ccggcgacag cgatcgagat gcggtaggcg tcgtcgccga
     2881 gcttctcgat gttgtagggc gggtaggtct tctgctcctg gccggcgagg ccgtcgagcc
     2941 gagtgaacag ccggtcgaaa ccgacggtcg agcgatagaa gggggtgaaa tcataggtct
     3001 gcatttgcac attctccatg tgagcaacgt ggattttgcg ggtgtcccac gcgtcctccc
     3061 atgtttggcg aagacgcatt cccgggtgtc ccggtccccg gcaccgccgg ctgacagccc
     3121 tgagataggt ggggtttgcg acggttcaac ccccggttgc ggcagatgaa ccgaaactga
     3181 atgccggtct cagggtggct tcaggtgccc ggctctaaac ccagcaccgt gctcgctgtc
     3241 tgctgcaacg gcacaagcga atgtgtcgcc gtcacccgcc ccccgcacgg cgaccccttc
     3301 tgaagaagcc agcatctcgc aagggatgct ggctttcctc atttcggggt ccaatgcgcg
     3361 ccgccggatt tccgcgcccg gaggaatcca gtaagcagcc tgtagcgtcc cgcatgcagc
     3421 ggacagttcg aggtgcaggt gaacgcgagc gtcgatcccg aaggcccgaa gctggcggtg
     3481 ctggcctcca atccggctcc cgaagggatg cgcgccggct atttcaccac gccggaccgg
     3541 gtgcggctgc gctatgcgac gttccccaag accgccgggg cgccgaaagg cacggtctgc
     3601 ctggtgcacg ggcgcaccga gttcatcgag aagtatttcg agacggtcgc cgacttccag
     3661 aagcgcggct ttgccgtcgc caccttcgac tggcgcgggc agggcggctc ggaccgcctg
     3721 atccgcaacc gcacgctcgg ctacgtccgg catttcgagg actactggct cgacctcaag
     3781 agcttccatg ccaacatcct gctgcccgat tgccccgggc cgttctacct cgtcggccac
     3841 tcgatgggcg ggctggtgtc gctgatcgcc ggcacccgcg accgcatgat gttcgaccgc
     3901 atcttcctgt cggcgccgat ggtcggactg gaccggcagc cgctcagctt cggcggcatg
     3961 gcggcaatcg gcgacacgct ctgcgccctc ggcctcggcg gggcgccgat cggccgggcc
     4021 gaggacgagc tgccgagcga gcgggccttc ggcggcaatc cactgacctc ggatttcgtg
     4081 cgctacatgc gtaccgtcga gacctggcgc gagcggccgg atctgatcgt cggcaagccg
     4141 acgttcaagt gggcggccgc cgcgatgcac gccatggcgc tggtggcgcg cgatcgcttc
     4201 ccgctgtcga tcaaggtgcc ggtgctgatg ctggccgcgg cgcgcgacga ggtggtgtcg
     4261 accgcctgga ccgagcaact cggcctcagg atgcggaccg gccggcacgc cgtgatcgcc
     4321 gcggcccggc acgagctgtt catggaaaac gacgccatcc gcggccaggt gttcgcggcg
     4381 ttcgacgcct tcatcaccga gcagagcgcc tagccccgca gcaccttcat cgccgctgca
     4441 tgcaactccg gtgtcgccgc cgcgacgcag ttgccgccgg cttcggcggg gccgccgtcc
     4501 caggtggtga cgatgccgcc ggcgttttcg atgatcggga tcagcggcgc gatgtcgacg
     4561 ttcttgagcg ccgattccgc gacgatgtcg atgtggccgg cggcgagcag gcaatagccg
     4621 tagcagtcga ggccccagcg gcactgcagc gtcgcggcgc gcagccggtt gatgttggcg
     4681 accgtgccgg cctgctcgaa gatgtcgggc gaggtggcgg tgaccttggc gcgcgccagt
     4741 tcggtgacgc ccgaggtatg gatctgccgg ctgtcgccgc cgcgcgtgta gaacgacgct
     4801 ccggcaagcc cgagataggt ctcgccggtg aagggctgcg ccatgaggcc ggcgacggcg
     4861 cggccgtggt gcatgaggcc gatcagcgtg ccccagacgg gtacgccgga gatgaaggcg
     4921 cgggtaccgt cgatcgggtc gacgatccag tcgaaggcgc cggccgcggc cttcggatcc
     4981 cactcctcgc cgatgatgcc gtggtcggga aagcgggcgg cgaggacggc acggatggcg
     5041 atctcggcgt cgcggtcggc cgcggtcacc ggatcgaagc cgtgctgcca tttgttctcg
     5101 accgccagcg gcgtacggaa gccggcgagg gtgagcaccg ccgcggcctc ggccgcctcg
     5161 agcagggtgg cgcggaccag ggccggatcg aggccggcta ggccagtgtc ggtcataggg
     5221 gattcccgaa ataagattgt cgttccagcg caacgccata gcagcaaaac gccgtcacag
     5281 aagcgtcatt tttgctacca gagaggtgat tcatttatgc aacataagcg gtcgtgggcc
     5341 tgtgcatatg aacgctcatc ttgctcgcgg gggcaaatca gtccacctgc agaattgcat
     5401 gatggatggg cggctcggtc tatcagctta aacttcgggc agatggcagg gccgccgtcg
     5461 tttcctccct tgactggggc cgcctcttgc gcggcccctt ctcttttggg cggttattcc
     5521 gcggccttgg cgggaagatg ctgcggcccg gtgagcaggc tcaaatcgta gccgatgagg
     5581 gcgagcgtca ggcgctcggc aagctggcgg atggcgttga agccctcgga ccgctccagc
     5641 gtcacctcgt tcatgtagag atgccggccg atctcgatct gcagcgcgtg gatgccgtgc
     5701 tgcggccggc cataggtgcg ggcgatgaaa ccaccggcat aggggcggtt gcgcgcgacg
     5761 cgcaggccgg cgccggcaaa caccatctcg cacagatcga cgaggccggc ggcgcaggtc
     5821 gtgccgtagc ggtcgccgag gacgatgtcg ggcgatgcgc ggtcgccgct gcgggcgatg
     5881 cgcggcatcg aatggcagtc gatcagtacc gccacgccga acatcccgac ggcgtcgctg
     5941 agcagccgct gcagcgtcgc gtgatagggc aggtagatgc cctcgatgcg catgcgggca
     6001 tcttcgatgg tcagccgctc gcgatagatc ggcttgttct cggcgacgac gcgggccagc
     6061 gtgccgagcc cggcggcgac gcgcggcgag gtggtgttga agcgatccga cagcggctcg
     6121 acgaacatct gcgggtcgag ttcccacggc tcgcggttga cgtcgagata ggcgcgcggg
     6181 aaatgcgccc gcaggaacgg cgtccccagg tgcggggcgc ggccgaacag ctcgtcgaca
     6241 taggcgtctt cggattgccg gatcgacagc tggtcgagcc gcgtcatgcc gaggaagcgc
     6301 tcgggatagt cgcggccgga atgcgccgag ttgaacacga tgggggcagt cagccggcgg
     6361 ggccggatgg tctcaaaggc cggtctgtcc cagtagtctg accgcaaaac aggctccgtt
     6421 cgttgccatt atcctgcatc ccggaccctg gctttgtcca gaaccgcatg acagccgttg
     6481 ccaatcaaca aaactcgatt aaacatgccg cgggcggcgc cggcggcagg cgaccagcgg
     6541 gcaacgaggc ggcgatgaaa cgaatccttc tggccgaaga cgacaccgac atgcgccagt
     6601 tcctgacccg cgccctcaag aacgccgggt acgacgtggt gtccttcgac aacggcaggt
     6661 cggcctatga gcggctgcgc gaagagccgt tctcgctgct gctcagcgat atcgtgatgc
     6721 ccgagatgga cggcatcgag ctggcgcggc gggcgaccga gctcgatccg gacctcaagg
     6781 tgatgttcat caccgggttt gcggcggtgg cgctcaatcc ggacagcgaa gcgcccaagg
     6841 atgcgtcggt gctgagcaag ccgtttcacc tcaaggacct ggtcaacgag gtcgagcggc
     6901 tgctcgcggc ctgacgtcgc ctgacacagg ttcatggccg gattgacgct tgaccctcgc
     6961 gcggctttca tggtctatcg ccgcgtccgc ttcggcgggt tctcggagac gggtgtatag
     7021 ctcagcggga gagcactacc ttgacatggt aggggtcaca ggttcaatcc ctgttacacc
     7081 caccatctcc ttgaaagaca acgccttttg gcgtcccgac aggatgggtg tgtagctcag
     7141 cgggagagca tcgccttcac acggcggggg tcacaggttc aatccctgtc acacccacca
     7201 tcctaccagg ttcccagctg ccgccggatc gcgtccatcg tttccatcgt cgcgatggcg
     7261 aagtcgagcg ggtgcagcgg cgaatccttc agtccttcag cgacatggct ggcgacagcc
     7321 gcggcttccc aggcgaggcc gtcgcggaac tgcaacggcg tgtcgttgac gaattgcagg
     7381 cggacgtcgc ccttgcccgg ctgcaccagc tcgaagccgg cgggcacggc catccacggg
     7441 ttgacctcga tgcgggccgc ggtgccgctg aggctggcgc gggccgggct gaaggcgagc
     7501 aggttggtac tgagcagggc ctgcgccccc gagccgtagc tcaggacgat cgccgtctgc
     7561 gcatcgacgc cggtcgcggt tttcgagccg gacgtgatca cctgctgcgg cttgccaagc
     7621 cacaactggc tgaaccagac gggataaatg ccgagatcga gcagcgcgcc gccaccgagc
     7681 gccggattgt agatgcggcc ctcggggtcg gtgttgccac gggtgccgaa gtcggcaatc
     7741 accaggcgaa ggtcgccgag caccccgtcg tcgcgcaact gcaccattac gtcggtctgc
     7801 ggcaggtagc gcgtccacat cgcctccatg gcaaagacgt tggccgcgcg ggccgcatcg
     7861 cgaatctcgc gagcgtcagc ggcggtgagc gcaatcggct tttcgatcaa caccggcttg
     7921 ccggcggcaa tggccatcag cgccagccgc ttgtgctcgc tgtgcggcgc ggcgacatag
     7981 acgatatcga cgtccttgtg ctcgatcacg gcgcgatgat cgtcgtaggc gtggagaata
     8041 ttgttcttct gggcaaaggc ccgggctcga tcgagcgacc ggctggccac ggcgacggca
     8101 cgctggtcgg tgtgcgtgtg catcgcgtgg acgaagtcct tggcgatgtc cccgggggcg
     8161 aggacgcccc agcggaggac cggaccgccc cgcagagggg cagcgagccg gggggtaggc
     8221 agcgacgtcg ggaatgcggt catgcattgc agtgtgcata atgtctttac aaatgcaatt
     8281 cggcggcgag catccatgag aaccggcgaa aagctgcgct gcggcgtcat cgtccctggc
     8341 ggcagtcttg ccggccaagg ctatatgtac taacattcgg tcataactag ggaggtcgtc
     8401 gctgcggatc ggcagcggcg cctggaaacg cgtcgaaagg atagagaatg gccgatagtc
     8461 tcggtgtcgt catggtcggg tgtggcggca ttgcccgaag ccacgctttc gcactgtcga
     8521 aggttcccaa tgcgaagctg ctcgtcagtg tcgacatcga cgaggcggcg gctaagcgct
     8581 tcaaggatcg cttcggcttc gagagctatt cgaccgacct ggccgccgcg ctggcgcgaa
     8641 aggatgtggg ggcggtggtc atcaccacct cgtccaaatc gcacggaccg ctgatcatcc
     8701 aggcgcttgc ggcgggcaag cacgtgctcg tgcaaaagcc gatgacggct tccgtcgcgg
     8761 agtcgcgcgc cgcggtcgag ctcgccaaga agaagggcct caagctgatg gtctcgttct
     8821 tcgagctgtt cctgccgccg gtcgagcgcg ccaagcagat catcgacaag gggctgatcg
     8881 gcacgccgtt cctgttcaag gcgatcatgg cgtggcacac gcccgacgtg actgccgggt
     8941 ggcggttcga tcccgagctc gccggcggcg gcgtgatcct cgacggcaac gtccaccacg
     9001 tctcgaatgc gctctacctg ctcggcgacc ctaagatcca gagcgtctac gccgagtacg
     9061 gagcgctgac cgccgatatc agggtcgagg acacggcggt gatcctgatt cgcaccgaca
     9121 aggcgatcct cgagatctcg ggcagcaacc ggctgcagga gccgggcggc gccaccgggc
     9181 acttcaagga ccagtgggcg gtgttcggga ccaagggcac gatccagtgg gatgctgccg
     9241 cgcggccgac cttccgcgtc ttcaccgccg acgacaaggc gctcgatccg ctgctcggca
     9301 atggctgggt gtcgccgaag ctgccggtgc tgccgcccga ccagcgggag ttctccatgc
     9361 acatcaatgg cgaggagagt ccctgggtgc cggagcacca gcatttcgtc gatgcctgcc
     9421 tcaacaacac gccggtccgc tccgacggcg agttcgggct gaagacgcag ctcatcctcg
     9481 aggccgccta caagtccggc agggaaggca agaagctcgg actcgaggcg gttggcggct
     9541 gatggcacgg acgatcatcg acacgcacag ccacatcggc acgacgatca cctcgggcgt
     9601 cggacaggat gtggcgacct ggctcaaggg catggatgcg gccggcatct cgcaggccgt
     9661 catctctact gccgccggtg gcatgcaggc cggcggcctc gccgacacgc gagcgatgaa
     9721 tgacctcatc gccggcgccg tgcggcagca ccccgatcgc ttccccatcg ggctggcggg
     9781 gatcgaagtc cgacatggcg aggccgggca tgcggaagtg cgccggtccc tcaacgagct
     9841 cggcctcaag ggcatggtgt tccatgccac gttcgaagga ttctcggtgg actcgcccgc
     9901 cttccacgcc gtgctcgcgg cagcaggcag cgtgaaggcg ctcatcctgc tgcactcgac
     9961 gccggacggc cgggccaatc caaccgccat tgcggccgtc gcggcgatgt tcccgaatct
    10021 caccttcatc ctcggccatc cggtgttcac cgagggccag cggcagcagg cggcggatgc
    10081 ggtgaaggcg aatgccaacg tgcatctgga tctggcctac caggacgatc cggcgaccac
    10141 ggagttcttc gtcgcgcagg tcggggccga tcgggtgttc tacggcagcg acgcaccgta
    10201 tttcgagccg gccaaggtga tcgcctccat cgagaaggcc aggatatcga cagtcgaccg
    10261 ggagaagatc ctgagcggca acgcccagaa gctcatcgcg gctttccgat agagcgatcg
    10321 tctagggcag atcgatgcgg cggccagtgg caatggattg ctcggccgcc gcgaggacct
    10381 tggtgacttt cgcacccagc cggactccgg gggcgatatc gaccttcttc tcggccagcg
    10441 cgccggcgac gaggcgcagg gcgccggcgt aggcgaccgt cgagtcggca aaccagtcgg
    10501 ggctctgcgg cagggtggtc ttgcctgctg caccgaacag cgcggtctca cccggcaggc
    10561 tcgtcggcgc gtccatggtg agggcgatgc tcgagaccgc cccgccgaca tgggtcagcg
    10621 tcaggagctt caggtcgccg gtgccgcgga tggcggaaac ctgcacgata tcgccgagcg
    10681 ttgtcagcag catggccacc gaatggggac cactgtccca cagcgcgccc gccgcgccgc
    10741 gccaggcggc gaccgtgccg aaaaacggat tggcctcgtc gtgcagcagc cgcgagtagc
    10801 tgtcgacgcg ggccgcgatc cagccgccgg ctgtcgctac gtcgttcagc caggcctgcg
    10861 tgcggggaat cagcaggtgc gtgaaaaaca ccagagccgg cagctcccgg gtctcgaact
    10921 cgcgggcgat ggcgtcggct tcgagcggat cgagggccag cggcttttcg agtatggccg
    10981 ccttcccggc cctggccgcg gcgagggcaa agtgcggctg aacggcgggc ggaagcgtga
    11041 tgccgacgat atcgacgctg tccaggaagg cgccaaggtc ggaatacgcc cgcaccctga
    11101 atggcgccgc cagggcttcc gccttgagcg cgttgcggcc aaagaccgag gtaaagctga
    11161 cggcgtcgct ctgcgcggcc gccggcgcct gcaccaggcg cggccagacg ccggtgccga
    11221 tcaggccgaa acgggggcgg tcgttcatct gtccttagtg cacgaacggc ttgaggttgt
    11281 cgcgggcgat ctcgaagccg cgtcgcacct tttcgaccga gccctcgaag ttgcggtcct
    11341 catgctcgat cgagacgaca tgatcgtagc cggtcgcata gagggcgccg aagaaggcgc
    11401 tccagtcgac gtcgccgagg ccgcacagac gcggcacctg ccagccgacg cctgcgctca
    11461 tcacgccctg ttcgtagagg ccgtcgcggc ggacctcgag gtccttggcg tgggcatgga
    11521 agatgcgctt gccgaactcg cggatggcgc gcgggatgtc gatgaactgc cagacgaggt
    11581 gggagggatc gaagttgagt ccgaaattgt cgtcggggat gatctcgaac atgcggcgcc
    11641 agttggcggg gctataggcg agattgttgc cgccgggcca ttcgtcgccc gaaaagatca
    11701 tcggacagtt ttcgatggcg atcttgatgc cgtggtcgcc ggcgaagtgc acgaggtccg
    11761 gccagacctt gctgaaacgg tcgaaattcg catcgatcga ctggctcttg tcacggccgg
    11821 cgaaggtgcc gacgacgggc accctcagca tgtcggcggc tacgatgacg tgccgcaaat
    11881 gctcgaacgc ggcggcggac acggccggat cgggatcgag cggattgggg tagaaggcga
    11941 gcgaggagat cgtgagaccc ttcttcgcca ggtcatcgac gatgcggtcg gcgtccgagc
    12001 gcgagaggcc gcggacgtcg atgtgggcgg tgccggcgta gcggcgttcg accttgccgc
    12061 cggcgggcca tacggcgatc tcgatcgccg agaacccgga ctggctcgcc cagctgctca
    12121 cctcgtcgag cgactgcgtc ggaaaggctg cggtcagtat gcccagtttc atgatgtcct
    12181 cctcggtacc gcttcagccg cggctcactg ttgtccattg tccggtgcgc gcgctctccg
    12241 cgacggcctc gacgatcagt gcctcgtcat ggccgtcctc gaacgtggcg taggcgggat
    12301 gcgggctcgg gcgacccgcc gcgatatcgg cgtagacggc gcgatacatc gcgcggaagc
    12361 cgttctcgaa cccctcggca tggccgcccg gcagcgcggc gatggccgcg gcctccggcg
    12421 acagcaggcc gggatcgcgc agcagcagct cgttcgggcg atcgcggtgg ccgatccaga
    12481 gctcgtcggg ccgctcgccg gcccaggcca gcgatgcctc ggcgccgttg acctcgagga
    12541 cgatgccgtt cttgcggccg gcgctgacct gcgaggcggt gacgaccccg tgcgcgccat
    12601 tgtcgaaccg caccacgatg atcgccgcat cctccgaggt catggccatg tcagtggtcg
    12661 ccccgcccgt ggcgcccgag aaggtctcga cgggcccctg cggccgcttg cgggtccgaa
    12721 ggaaggtcgg aaggtccgcc atcacttcga cgatcctgct gccggtgacg aaactcgcga
    12781 ggtcgaacca gtgggagccg atgtcgccga cgacgcgcag gtcgccgccc cgcccggtct
    12841 cggcgcgcca gttccagtcg gtgggcttca gcagccagtc ctgcaggtag gcgccggtga
    12901 cgaggtaggg cttgccgatg ccgccggacc tgatgcgggc gcgcatctcg tgcgccagcg
    12961 ggtagaagcg gatgttgaaa ttgacggcgg cgacgagccc ggtgtcgcgc gccagagtgc
    13021 gcagcatgcc ggtatcggac gaggcgagcg ccagcggctt ctcgcagacc acgtgcttgc
    13081 cggcgcgcag cgccgccgcg gcctgcgccg gatggtcgtc attgggcgag gtgatgtgga
    13141 cgacgtcgac ggcggggtcg gcgagcattt cgtcatagct cgcataggca cggcggacgc
    13201 cgagctgtgc tgccttctcg gcggcgcggc cggccgacga gccgacgacg ccggtgacgg
    13261 tcgccccgag ccgacggatc gcgtcgatgt gcacggcgcc gatgaagccc gtgccgacca
    13321 ccgcggcgcc aatgtcagcg attgccttca cgccaaatcc tccccgcccg cctcagcgcg
    13381 tccggcctca ggccggaatg atcacggtct tgatgccctc gccgttggcg gccgcatcga
    13441 acgcatcgtt ccactgcgag atcggcacct gccgggtcac cagcggacgc agcttcacga
    13501 gctttgcttc gatcaacgcc atcgcccgct tccacgattt cggcgtggag gcgaagccgc
    13561 tggtcaccac gagctccttg tagagcacct gatccagcgg cacgcttatt tctccgccaa
    13621 aaattccgac ctggatatag cgcccgccgc gccgcgccga ccgcaggcag gcctttgccg
    13681 cggcggcgct gccggagcac tcgacgacca cg
//
LOCUS       DATAZA010000266         5761 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2465071, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000266 DATAZA010000000
VERSION     DATAZA010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5761)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5761)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5761
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2465071"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(97..453)
                     /gene="uraH"
                     /locus_tag="VHZ56_06730"
     CDS             complement(97..453)
                     /gene="uraH"
                     /locus_tag="VHZ56_06730"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007824623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019628 - urate catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HEX4297699.1"
                     /translation="MAGSPRLTTHVLDTMHGKPASGMRFDLLMLHGDHSHHLLTSNTN
                     ADGRADGPLLEGDHFHLGAYELVFHVGPYFERLGLDLETPFLDLVPVRFTMSEMAHYH
                     VPLLVSPYGYSTYRGS"
     gene            608..2029
                     /gene="puuE"
                     /locus_tag="VHZ56_06735"
     CDS             608..2029
                     /gene="puuE"
                     /locus_tag="VHZ56_06735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010975644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0000256 - allantoin catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="allantoinase PuuE"
                     /protein_id="HEX4297700.1"
                     /translation="MRYPRNMLGYGRTPPDPKWPGGAYVAVQIVLNYEEGGENNVLHG
                     DAASEAFLVDVLGAAPWPGQRHANVESMYEYGARAGFWRLWKYFTGAGVPVTVYGVAT
                     ALMRAPQQLAAMQEAGWEIASHGYKWVQHKDMPADEERRQIAEAIRLHTIATGERPTG
                     WYTGRSSLQTVDLVSEEGGFEYVSDTYDDDLPYWRPHKGRAQLVIPYTLAANDMRFVT
                     APGFDNGEEYFQFLKDSFDVLYEEGRAGSPKMMSIGLHCRLVGMPGRFAGLQRFVDYV
                     RAKDRAWIARRIDIARHWAQHHPYEAPALVPSEMDRTQFVGHFGSIFEHSAWLAERAF
                     DAELGPVNDTASGLHFALRSQFRMATEHERLGVLTAHPDLAGKLAQARRLTDASTSEQ
                     ASAGLDALTDHERAEFGELNAAYTAKFEFPFIIAVRDNTRQMILEAMRIRLGNDRRTE
                     FNTACAQVERIALVRLRALLPEL"
     gene            2030..2716
                     /locus_tag="VHZ56_06740"
     CDS             2030..2716
                     /locus_tag="VHZ56_06740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019565539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX4297701.1"
                     /translation="MYVLHIANKNYSSWSLRPWVLMQTLGIPFEERLHIFPSNGPSYP
                     EFSKFSPTGFVPVLDDGDIKVWDTLAIAMHLAEARPDVWPADLVARSWARSAAAEMHS
                     GFGALRNMCGMNVGIRARTPEIAPGLAHDLARLDQLWADGIGRFGGPFLAGRTFSAVD
                     AFFCPVAFRVQSYNLPLADQSMAYVQRLLALPAMQSWAKAAIAETSREPNHEAETTLA
                     HAIIEDLRAR"
     gene            complement(2723..2914)
                     /locus_tag="VHZ56_06745"
     CDS             complement(2723..2914)
                     /locus_tag="VHZ56_06745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297702.1"
                     /translation="MSVPVVHQAPASEKFMAFIERHDTLRMVMQWLTDRFADEPEVDD
                     TIAWEDGEEHDEADRPSTV"
     gene            3121..3942
                     /locus_tag="VHZ56_06750"
     CDS             3121..3942
                     /locus_tag="VHZ56_06750"
                     /EC_number="3.5.3.26"
                     /EC_number="3.5.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009759915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004037 - allantoicase activity [Evidence
                     IEA];
                     GO_function: GO:0071522 - ureidoglycine aminohydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0010136 - ureide catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional allantoicase/(S)-ureidoglycine
                     aminohydrolase"
                     /protein_id="HEX4297703.1"
                     /translation="MAANPYASPIAGLPDQTALHTGRAVFTEAYALIPRGVMRDIVTS
                     YLPHWSDTRAWVLARPMTGFAETFSQYVMEVFPGGGSAQPEPEPGAEGVLFVVAGQAS
                     LVVDGKSHALRAGGYAYLPAGCRWTFRNKGKNPVRFHWIRKRYEAVEGIDAPVPFVAN
                     EQDEPIVWMPGTDNRWGTTRFVDPTDLRHDMHVNIVTLEPGAVIPFEETHVMEHGLYV
                     LEGKAVYRLNRDWVEVAAGDFMWLRAFCPQACYAGPERFRYLLYKDVNRHMKLKL"
     gene            3957..4448
                     /locus_tag="VHZ56_06755"
     CDS             3957..4448
                     /locus_tag="VHZ56_06755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018329337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ureidoglycolate lyase"
                     /protein_id="HEX4297704.1"
                     /translation="MRILQTEPLSRNAFAPFGQVIETADAHHYPINSGNCERYHDLAR
                     IELGGAHPRPLISLLRARAFALPLTLTMVERHPLGSQAFYPLSSHPFLVVVAPDATGS
                     PGLPRAFVTGPGQGVNLGMNVWHGVLTPLDADADFLCVDRGGDGNNLEEHVFAEPWLV
                     QAA"
     gene            4515..5297
                     /locus_tag="VHZ56_06760"
     CDS             4515..5297
                     /locus_tag="VHZ56_06760"
                     /inference="COORDINATES: protein motif:HMM:NF015669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HEX4297705.1"
                     /translation="MIAHQPVLVAAVLLCFAAAPALAAKISLPGQVTYRERIALPQDA
                     QLRVELIDESTPGAPPRLDVSAPIGPGQVPLSFQLSFEDALILPSHSYALIAEISVAR
                     QLMFRNYAPYAVNPLAPIAPVLIVANLVGQPTEDTVSSSSSTPPAAPATSALLDTTWT
                     ATTLGGKPLLPRTAPSLLIGDDLRAGGNGGCNSWFAQAEIDGDSLRFGGVTATLKGCT
                     QSINLQERAYFDALAATATWRVAGDTLSLFDAGGTELLSFSR"
     gene            5334..>5761
                     /locus_tag="VHZ56_06765"
     CDS             5334..>5761
                     /locus_tag="VHZ56_06765"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015314322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HEX4297706.1"
                     /translation="MDTPALLDRLLDVIEFDIAPLTWAGVERGNKLFGAAILRKSDLS
                     LVVAETNNEIENPLWHGEIHAIKRFYEIPAEQRPDPGACLFLATHEPCSLCLSGITWS
                     GFDNFYFLFSHQDSADSFAIPHDIQILKAVYAVADPDRDVP"
BASE COUNT          950 a         2039 c         1781 g          991 t
ORIGIN      
        1 gcagatagtc gagcagggtt tccgtcgcct tgatttccgt gatcgccaca tcttcatcgt
       61 tgaggacgaa ccgcagcgct ttcgaggtct cgcccatcag ctgccccgat aggtcgaata
      121 gccgtatggc gaaaccagca gtggcacatg gtagtgagcc atttcgctca tcgtgaaccg
      181 caccggcaca agatcgagga acggtgtttc gaggtcgagc cccagccgtt cgaaatacgg
      241 gccaacatgg aagacaagct cgtacgcgcc gaggtggaaa tgatccccct cgagcagcgg
      301 gccgtcggct cgcccgtcgg cgttggtatt ggaagtcagc agatggtggc tgtggtcgcc
      361 atgcagcatc aagagatcga accgcatgcc actcgccggc ttgccatgca tggtatcgag
      421 gacatgggtg gtcaggcgcg gagaccccgc cattccggtc cctttcttct gtgatcttgc
      481 ggactatcag aaataatctg ccacattcca agggggtgcg cgccaatttt ttaccaaacg
      541 gtccactttc gcgcggcttg tgcggcaccc ggctgctcgg cataaacggc cagcctccgg
      601 aggtcttatg cgctatcccc gcaacatgct cggctacggc cgcaccccgc ccgatccgaa
      661 atggccggga ggcgcctatg tcgcggtgca gatcgtcctc aactacgagg agggcggcga
      721 aaacaacgtc ctccacggcg acgccgcgtc ggaagctttt ctcgtcgacg tgctcggcgc
      781 ggcaccgtgg ccgggacagc gacacgccaa cgtggagtcg atgtacgagt acggcgcccg
      841 tgccggattc tggcggctct ggaaatactt caccggcgcc ggcgtcccgg tcaccgtcta
      901 tggcgttgcc accgcgctga tgcgcgcgcc ccagcagctt gccgccatgc aggaggccgg
      961 ctgggagatc gcctcgcacg gctacaaatg ggtccagcac aaggacatgc ccgcggacga
     1021 agagcgccgg cagatcgccg aggccatccg cctccacacc atcgccaccg gcgagcgccc
     1081 gaccggctgg tacaccggcc gttcgtcact gcagaccgtc gacctcgtct ccgaggaggg
     1141 cgggttcgag tacgtctcgg atacctatga cgacgacctg ccctattggc gaccgcacaa
     1201 gggccgggcc cagctcgtca tcccctacac gctggcggcc aacgacatgc gcttcgtcac
     1261 ggcccccggg ttcgacaatg gcgaggaata cttccagttc ctgaaggaca gcttcgacgt
     1321 cctctacgag gaggggcggg ccggatcgcc caagatgatg tcgatcgggc tccattgccg
     1381 cctcgtcggc atgccgggcc gcttcgccgg cctccagcgc ttcgtcgact acgtcagggc
     1441 gaaggatcgg gcctggatcg cccgccgcat cgacatcgcc cgccactggg cccagcatca
     1501 cccgtacgag gcgccggcgc tcgtgccgtc ggagatggac cgtacccagt tcgtcggcca
     1561 tttcggctcg atcttcgagc actccgcctg gctcgccgag cgcgccttcg atgccgagct
     1621 gggtcccgtc aacgacacgg cgagcggtct ccatttcgcc ctccgcagcc agttccgcat
     1681 ggccaccgag cacgaacggc ttggcgtgct gacggcccac ccggaccttg ccggaaagct
     1741 cgcccaggcc cgccggctca ccgacgcttc gacgtccgag caggcctcgg ccggcctcga
     1801 tgccctgacc gaccatgagc gggcggaatt cggcgagctc aacgcggctt acaccgccaa
     1861 gttcgagttc cccttcatca tcgccgtccg cgacaacacc aggcagatga tcctcgaagc
     1921 catgcgcatc cgcctcggca acgaccgccg caccgagttc aacactgcct gtgcccaggt
     1981 cgagcgcatc gcgctggtgc gcctgcgcgc ccttcttccg gagctttgaa tgtacgtcct
     2041 ccacatcgcc aacaagaatt attcgtcctg gtcgctgcgg ccatgggtgc tcatgcaaac
     2101 gctcggcatc ccgttcgagg aacggctgca catctttccg tcgaacggcc cctcctaccc
     2161 cgagttcagc aagttctcgc cgacaggctt cgtgccggtc ctcgacgatg gcgacatcaa
     2221 ggtttgggat accctggcga tcgcgatgca cctcgcggag gctcgccccg atgtctggcc
     2281 ggccgatctg gtggcccgct cgtgggctcg ctccgccgcg gccgagatgc attcggggtt
     2341 tggcgcgctg cggaatatgt gcggcatgaa cgtggggatc cgggcccgga cgccggagat
     2401 tgctcccggc ctcgcgcacg atctggcgcg gctggatcaa ctctgggccg atggaatcgg
     2461 gcgcttcggc gggccttttc tggccggacg gacgttcagt gcggtggatg ctttcttctg
     2521 cccggtggcg ttccgcgtgc agagctacaa cctgccgctg gcggaccagt ccatggccta
     2581 cgtccagcgc ctgctggcgc taccggccat gcaatcgtgg gcgaaggcgg caatcgcgga
     2641 gacgtcgcgc gagccgaacc acgaggccga gaccacgctg gcgcatgcca tcatcgagga
     2701 tttgcgcgca agataacaag gactagacgg ttgacggtcg gtccgcctcg tcgtgctcct
     2761 cgccatcttc ccatgcgatg gtgtcgtcga cctccggctc gtcggcaaaa cggtcggtga
     2821 gccactgcat gaccatgcgc agtgtgtcgt gccgctcgat gaacgccatg aacttctcgc
     2881 tggccggtgc ctggtggacg acggggacgc tcatggtgaa aggatgccgc gcaatggtga
     2941 aggtttcgcc aacgcgcctc cctgccccca agttgcattt gtagaaatcc gacgcggttc
     3001 gcggcgcttg cggacggagc agcaccgcga tcgaatcccc tgcgttgaaa cgcaagcggc
     3061 tgtcggggcc gaagcaactg cgctaaggag gacgcaccga ccacagccgc atttcatcca
     3121 atggccgcca atccttacgc cagtccgatc gccgggctgc ccgaccagac cgcgctgcac
     3181 accggccggg ccgtcttcac cgaggcctat gccctcattc cgcgcggcgt gatgcgggac
     3241 atcgtcacca gctacctgcc gcactggtcc gatacgcggg cctgggtgct ggcgcggcca
     3301 atgaccgggt tcgcggaaac cttctcgcaa tatgtcatgg aggtgtttcc gggcggcggc
     3361 agcgcccagc cggaaccgga gccgggtgcc gagggcgtgc tgttcgtggt cgccggccag
     3421 gcgagcctcg tcgtcgacgg caagtcgcac gcgctacgcg ccggcggcta cgcctacctg
     3481 ccggccggat gccgctggac cttccgcaac aagggcaaga atccggtgcg tttccactgg
     3541 atccgcaagc gctacgaagc ggtggaaggg atcgatgccc cggtgccctt cgtcgccaac
     3601 gagcaggacg agccgatcgt ctggatgccc ggaaccgaca accgctgggg cactacgcgc
     3661 ttcgtcgacc cgaccgatct gcgccatgac atgcatgtca acatcgtcac cctcgagccg
     3721 ggcgcggtga tcccgttcga ggaaacgcac gtgatggagc acggcctcta cgtgctcgag
     3781 ggcaaggccg tctaccggct caaccgcgac tgggtcgaag tcgcggcggg tgacttcatg
     3841 tggctgcgcg ccttctgccc gcaggcgtgc tacgccggtc cggagcggtt ccgctatctg
     3901 ctctacaagg acgtgaatcg gcacatgaag ctgaagctct agcgcgaagc ccggacatgc
     3961 gaatcctcca gaccgagccg ctcagccgca acgccttcgc tcccttcggc caggtgatcg
     4021 agaccgccga tgcccatcac tacccgatca attccggcaa ttgcgagcgc taccacgacc
     4081 tcgccaggat cgagctcggc ggcgcccatc cccgcccgct gatctcgctg ctgcgcgccc
     4141 gcgccttcgc cttgccgctg accttgacga tggtcgagcg gcatccgctc ggcagccagg
     4201 cgttctatcc gctctcgtcg catccgtttc ttgtcgtcgt cgcgcccgac gccaccggca
     4261 gtcccggcct gccgcgcgcc ttcgtcaccg gaccgggcca gggcgtcaat ctcggcatga
     4321 atgtgtggca cggcgtgctg acgccgctcg acgccgacgc cgatttcctc tgcgtcgacc
     4381 ggggcgggga cgggaacaac ctcgaggagc atgtcttcgc cgagccctgg ctggtccagg
     4441 ccgcctgaaa gccgttttat ttcgtccaca ttcccccgcc agagtcggca tttgccgtgc
     4501 ggagtgtgtt ttcgatgatt gcccaccagc ccgtcctggt cgccgccgtc ctgctgtgtt
     4561 tcgccgcggc gccggccctc gccgccaaga tcagcctgcc gggccaggtc acctatcgcg
     4621 aacggatcgc cctgccccag gacgcgcaat tgcgcgtcga gctcatcgac gaaagcactc
     4681 cgggcgcgcc gccgcggctc gacgtctcgg cccccatcgg tcccggccag gtgccgctga
     4741 gcttccagct gagcttcgag gacgccctca tcctgccgag ccacagctac gcgctgatcg
     4801 ccgagatcag cgtcgcccgg caactgatgt tccgcaacta cgcgccgtac gcggtgaacc
     4861 cgctcgcgcc gatcgccccg gtgctcatcg tcgccaacct cgtgggccag ccaacggagg
     4921 ataccgtgtc cagctccagc tcgactcccc cggcggctcc ggcgacatcc gcgctgctcg
     4981 acacgacgtg gacggcgacg acgctgggcg gcaaaccgct gctgccgcgc accgccccgt
     5041 cgctgctgat cggcgacgat ttgcgcgccg gcggcaatgg cggctgcaat tcctggttcg
     5101 cccaggccga gatcgacggc gacagcctcc gcttcggcgg cgtcaccgcg acgctcaagg
     5161 gctgcaccca gagcatcaac ctgcaggagc gcgcgtattt cgacgccctc gcggcgacgg
     5221 cgacctggcg cgtcgccggc gatacgctca gcctcttcga cgccggcggc acggagctgc
     5281 tgagcttttc tcgctgactt gacgccgatg cgccgcccgg caagggtcgc gcgatggaca
     5341 ccccagcgct gctcgaccgc ctcctcgacg tcatcgagtt cgacatcgct cccctgacct
     5401 gggccggcgt cgagcggggc aacaagctgt tcggcgccgc gatcctgcgc aaatccgacc
     5461 tctcgctggt cgtcgccgag accaacaacg agatcgaaaa tccgctgtgg cacggcgaaa
     5521 tccacgccat caagcgcttc tacgagattc cggccgagca gcggcccgac cccggggcgt
     5581 gcctgttcct cgccacgcac gaaccctgct cgctctgcct cagcggcatc acctggtccg
     5641 gcttcgacaa tttctacttc ctgttcagcc accaggactc ggccgacagc tttgccatcc
     5701 cgcacgacat ccagatcctg aaggcggtgt acgcggtcgc cgacccggac cgcgacgtcc
     5761 c
//
LOCUS       DATAZA010000267         5537 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2233558, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000267 DATAZA010000000
VERSION     DATAZA010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5537
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2233558"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..486
                     /locus_tag="VHZ56_06770"
     CDS             <1..486
                     /locus_tag="VHZ56_06770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5 family C-terminal domain-containing
                     protein"
                     /protein_id="HEX4297707.1"
                     /translation="AAQVRAAFRDRIPVLDGGPSQSGVESTILAIDGDTVTQLRAGGL
                     PRDEIEAALGRPVALAAPGSTIAAPGMLASHYAPNATLRLDATAPEPGEAYLAFGPGQ
                     GTLNLSTTANLHEAARNLFAMLHQLDETATRIAVAPIPRHGLGEAINDRLHRAAAPRP
                     R"
     gene            584..1942
                     /locus_tag="VHZ56_06775"
     CDS             584..1942
                     /locus_tag="VHZ56_06775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007613408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEX4297708.1"
                     /translation="MPASDEIELAELVSALSYALDLTEGQPAGHSVRACWIGIHVGME
                     LGLSAADLTELYYTILLKDVGCSSNAARICQLYVTDDLTMKAAAKFLDHTPPQFLWYL
                     ISHAGMKRGLVERFRIIVETALKTGEIAHELTDTRCHRGADIARTMRFSETVAQGITD
                     LDEHWDGTGQPANKPGEAISLFARIALLAQVTDVFFTSEGPLKAMAEVARRSGTWFDP
                     RLVQSMQMVAARPDFWRSLSDPLLQQRVVDYQTVKASRPVDEDYLDDIAAAFAQVIDA
                     KTPYTSGHSDRVALFSDLIAGELAMDPLRRRRLRRAALLHDIGKLGVSNQTLDKPGKL
                     DAEEWAEIKRHPALGELVLSRVAAFSDLAEVAAQHHERLDGAGYPRGLPAEKIGLESR
                     IVAVADVFDALTADRPYRKAMTATAATAILAEMAGPALDPLCVAALQRGLSGLDAEAQ
                     AA"
     gene            complement(1939..2892)
                     /locus_tag="VHZ56_06780"
     CDS             complement(1939..2892)
                     /locus_tag="VHZ56_06780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ C-terminal domain-containing protein"
                     /protein_id="HEX4297709.1"
                     /translation="MRDPYTVLGVSRSVSEKDLKSAYRRLAKANHPDQNQKDPKAQQK
                     FAEISAAYDFLTDKDKKAAFDRGEIDADGSPKFSNFGGAGMGGGAQRGPQSGAGAGFS
                     AEDILKEFMSGFGGAQARTTRGGGAAGFDPFAGAGVGGGYARQPQAKGEDVNVTLAVS
                     LEDAHKGGSVPLRLPSNKVVNVKLPDKVEDGQQIRLKGQGTSSPWGGEAGDALVTVKF
                     ERHAKFRRDGGDLRVDVPVTLYEAVLGGKVRVPTLDGEAELTLPANINTAKALRLKGK
                     GLHGTGDLYASLRIVLPDKGDPDLESLMRFWRDQKPYKVRD"
     gene            3066..3701
                     /gene="pdxH"
                     /locus_tag="VHZ56_06785"
     CDS             3066..3701
                     /gene="pdxH"
                     /locus_tag="VHZ56_06785"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HEX4297710.1"
                     /translation="MVSPSPSERLFDDADNAPIDPFALFEEWLALAAASEPGDPHAMA
                     VATVDAAGLPDVRMVLMNARDRRGFVFFTNFDSRKGDQLRAHPRAALVFHWKSLHRQV
                     RARGPVETVAPSEADAYFATRSRTSRLGANASRQSRPLASRGELLAAVDRLAAWMPVD
                     QPVPRPPHWSGFRVIPTEIEFWQQGEFRLHDRVRFSRTDSIAPWTRQRLYP"
     gene            3788..4984
                     /locus_tag="VHZ56_06790"
     CDS             3788..4984
                     /locus_tag="VHZ56_06790"
                     /inference="COORDINATES: protein motif:HMM:NF017770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF898 family protein"
                     /protein_id="HEX4297711.1"
                     /translation="MGRVEFTGSRHELFAIIVRGYALMLPTIGLYRFWQATWKRRFYW
                     QNTVIDGEPLEYTGTPSQLLIGFFFALAFFLPIYIALFVLSMQDSRYVAWGYAAVAAI
                     VWFLMGYAIYRARDFRLSRTLWRGIRFDQKGSAFAYGIRRFLWSILMVATLGLVYPWM
                     ASSLWRYRWRNTWFGDRHFDIAGRWTAFAGPYFATWFLNALTIGSAIAWIAVHRDVQR
                     LGTIVVPGPVGLGYCALCVVVFALTLAGYRTTTVSRLLSTVSLGEASITVRLGFAALL
                     GQFVAYVVGIVLVLLLLALTAAFALGGVYAVAAAHGRPLDAALADLLQSSPLDVALLI
                     AAYLLVLGCFGLLSEVVLGFGWWRLLARGSTISNPDSLRSVRATAEDRALIGQGLADA
                     LNVGAY"
     gene            4984..>5537
                     /locus_tag="VHZ56_06795"
     CDS             4984..>5537
                     /locus_tag="VHZ56_06795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297712.1"
                     /translation="MEFAARYQDGLVAELRDVLCVIDLAAEPVALVILDGPTREVIDR
                     WPALDVYLLHTRMAELRIGNRRKAAGARLAVTGVTDTRKALGVLPALARNQRRDGWAQ
                     FRVVALATAALASVIVAYLFGIPLLSDRIVRLVPPSWEIKVGDTAAAQIENSMTGGKG
                     FVACDPDPQSPANLAIARFVHDAF"
BASE COUNT          762 a         2109 c         1699 g          967 t
ORIGIN      
        1 gcggcacagg tgcgcgccgc cttccgcgac cgcatcccgg tcctcgatgg cggcccgagc
       61 cagtccggcg ttgaatccac catcctcgcc atcgatggcg acaccgtcac ccagctccgg
      121 gcgggcggcc tgccgcgcga cgagatcgag gccgccctcg gtcggcccgt cgcgctcgcc
      181 gccccgggaa gcaccatcgc cgcccccggc atgctcgcca gccactacgc ccccaacgcc
      241 acgctccgcc tcgacgccac ggctcccgaa cccggcgaag cctacctcgc cttcggcccg
      301 gggcagggca cgttgaacct ctcgaccacg gccaacctcc acgaagccgc ccgcaacctc
      361 ttcgccatgc tgcaccagct cgacgaaacc gccacccgca tcgccgtcgc tccgatcccc
      421 cgccacggtc tcggcgaagc gatcaacgac cgcctgcacc gcgctgcggc cccgcggccc
      481 cgctaatcaa ctgttaacgc tgattgcgtc cgtgatccgg cctcaagggt cgcgaaacca
      541 tccgcgggcc atcacgtcgg tagatgtacg gagatcgtcg cccatgcccg cctctgacga
      601 gatagagctc gccgaactcg tcagcgcgct gagctacgct ctcgacctca ctgagggtca
      661 gccggcgggt cactcggttc gcgcctgctg gatcggcatc cacgtcggca tggagcttgg
      721 cctctcagcc gccgacctca ccgagctcta ctacacgatc ctgctcaagg acgtcggctg
      781 ctccagcaac gccgcgcgca tctgccagct ctatgtcacc gacgacctca ccatgaaggc
      841 cgcggcgaag tttctcgatc acacgccgcc gcaattcctc tggtatctga tctcccatgc
      901 cgggatgaag cgcggcctcg tggagcgctt ccggatcatt gtcgaaaccg cgctgaagac
      961 tggcgaaatc gcccacgagc tcaccgacac gcgctgccac cgcggtgccg acatcgcgcg
     1021 caccatgcgg ttctccgaaa ctgtcgccca gggcatcacc gatctcgacg agcattggga
     1081 cggcaccggc cagccggcca acaaacccgg cgaggccatc tcgctcttcg cccggatcgc
     1141 cctgctggcc caggtgaccg acgtgttttt caccagcgag ggcccgctca aggcgatggc
     1201 cgaagtggcc cgccggtcgg gcacctggtt cgatccgcgc ctcgtgcagt ccatgcaaat
     1261 ggtcgccgcg cgccccgatt tctggcgctc gctgtcggac ccgctgctgc agcagcgggt
     1321 cgtcgactat cagaccgtca aagcctcgcg gccggtcgac gaggactacc tcgacgacat
     1381 cgccgcagcc ttcgcgcagg tgatcgacgc caagaccccg tacaccagtg gccacagcga
     1441 ccgggtggcg ctgttttccg atctgatcgc cggcgagctg gcgatggatc cgctgcgccg
     1501 tcgccggctt cgccgcgcgg cgctgctgca cgacatcggc aagctcggcg tctccaacca
     1561 gactctcgac aagcccggca agctcgacgc cgaggaatgg gccgagatca agcggcatcc
     1621 ggcgctgggc gaactggtcc tcagccgcgt cgccgctttc agcgatctgg cggaagtcgc
     1681 ggcccagcac catgagcgcc tcgatggggc aggatacccg cgtggcctgc cggccgaaaa
     1741 gatcgggctc gagtcgcgca tcgtcgcggt cgccgacgtc ttcgacgcgc tcaccgccga
     1801 tcggccctat cgcaaggcga tgacggccac cgccgcgact gcgattcttg ccgagatggc
     1861 gggaccggcc ctcgatccgc tgtgcgtcgc ggcgctgcag cgcggtctct cggggctcga
     1921 tgccgaggcc caggccgcct agtcccgcac cttgtacggt ttctggtcgc gccagaaccg
     1981 catcaggctc tcgaggtcgg ggtcgccctt gtccggcaac acgatcctga ggctggcgta
     2041 gaggtcgccc gttccgtgca ggcccttgcc cttgagccgc agcgctttgg cggtgttgat
     2101 gttggcgggc agcgtcagct cggcttcgcc gtcgagcgtc ggcacccgca ccttgccgcc
     2161 cagcaccgcc tcgtacagcg tgaccggcac gtcgacccgc aaatccccgc cgtcgcggcg
     2221 gaacttcgcg tgccgctcga acttcaccgt gaccagcgcg tcgcccgctt cgccgcccca
     2281 cggtgagctc gtgccctggc ccttcagccg gatctgctgg ccgtcctcga ccttgtccgg
     2341 cagcttgacg ttgacgacct tgttgctggg cagccgcagc ggcaccgagc cgcccttgtg
     2401 ggcgtcctcg aggctcaccg ccagcgtcac gttgacatcc tcgcccttgg cctgcggttg
     2461 ccgcgcatag ccgccgccga cgcctgcgcc cgcgaacggg tcgaacccgg cggcgccgcc
     2521 gccccgcgtc gtgcgcgcct gcgcgccgcc gaagccgctc atgaactcct tgaggatgtc
     2581 ctcggcggaa aatccggcgc cggctcccga ctgcggtccc cgctgcgccc cgccgcccat
     2641 cccggcgccc ccgaaattgc tgaacttcgg gctgccgtcg gcgtcgatct cgccgcggtc
     2701 gaaagccgcc ttcttgtcct tgtcggtgag gaaatcgtag gcagccgaaa tctcggcgaa
     2761 cttctgttgc gccttcgggt ctttttggtt ctggtcgggg tggttggcct tggccagcct
     2821 gcgataggcg gacttcaggt ccttctcgct cacggaacga gaaaccccga gcacggtata
     2881 gggatcgcgc atgggttcct tcggtgctca ggcgcgccag gaaagtggac ttccggggtc
     2941 ccgcttcggg cgcgcgactg cttcgactcg tcgggcaatt gaacgactgc ccctcatcga
     3001 tctatatggc cacggctccc cgccttgtcc agaccggcag aaacccgaaa gaacggcaca
     3061 ttccaatggt ttcaccgagc ccgtccgagc gcctcttcga cgacgccgac aacgccccga
     3121 tcgacccgtt cgcactgttc gaggagtggc tcgcgctggc ggccgcgagc gaacctggcg
     3181 atccgcacgc catggcggtc gccactgtcg acgccgccgg cctgccggac gtccgcatgg
     3241 tgctgatgaa cgcccgcgac cggcgcggct tcgtgttctt caccaatttc gacagccgca
     3301 agggcgacca gttgcgcgcc caccccaggg ccgcgctggt cttccactgg aaatcgctgc
     3361 accgccaggt gcgggcgagg gggccggtcg agaccgtcgc gccctccgag gccgacgcct
     3421 atttcgccac ccgctcgcga acctcgcggc ttggcgccaa cgcttcccgc cagtcgcggc
     3481 cgctcgccag ccggggggaa ttgctcgctg ccgtcgaccg gcttgcggcc tggatgcccg
     3541 tcgaccagcc ggtgccccgt ccgccgcact ggtccggctt tcgcgttatc cccaccgaga
     3601 tcgagttctg gcagcagggc gaattccgcc tgcacgaccg cgtccgcttc agccgaaccg
     3661 attcgatcgc gccgtggacc cgccagcgtc tctatccgtg accttgccgc cgaaccggcc
     3721 gcatgaaatc gtgagtgcgg ggcgttcggt cggggcggcg atggcggaaa cttctcctga
     3781 ggcgagggtg gggcgtgtgg agttcaccgg ctcccggcac gagctctttg ccatcattgt
     3841 ccgcggctac gccctgatgc tgccgaccat cggcctctac cgcttctggc aggccacctg
     3901 gaagcgccgc ttctactggc agaacaccgt catcgacggc gagccgctcg aatacaccgg
     3961 cacccccagc cagctgctga tcggcttctt cttcgcgctg gcgtttttcc ttcccatcta
     4021 catcgcgctg ttcgtgctct cgatgcagga cagccgctac gtcgcctggg gctatgccgc
     4081 cgtcgccgcc atcgtctggt tcctcatggg ctacgccatc tatcgcgccc gcgacttccg
     4141 gctgtcgcgc accctctggc gcggcatccg cttcgaccag aagggcagtg ccttcgccta
     4201 cggcattcgc cgcttcctgt ggtccatcct gatggtcgcg acgcttggcc tcgtctatcc
     4261 gtggatggcc tcgagccttt ggcgctaccg ctggcgcaac acctggttcg gcgaccgcca
     4321 tttcgacatc gccggccgct ggacggcctt cgccggcccg tatttcgcca cctggttcct
     4381 caacgcgttg accatcggca gcgccatcgc ctggatcgcc gttcaccgcg acgtccagcg
     4441 cctcggcact atcgtcgtgc ccgggcccgt ggggctgggc tattgcgcgc tctgcgtcgt
     4501 cgtcttcgcc ctcaccctcg cgggctatcg caccaccacc gtctcgcgcc tgctctcgac
     4561 cgtgtcgctc ggcgaggcca gcatcaccgt gcgcctcggc ttcgccgcgc tcctcggcca
     4621 gttcgtggcc tatgtcgtcg gcatcgtcct cgtgctgctg ttgctggcgc tcaccgccgc
     4681 cttcgccctc ggcggcgtct atgcagtcgc cgccgcgcac ggtcgcccgc tcgatgcggc
     4741 gctggccgac ctgctgcagt cgagcccgct ggacgtcgcg cttctcatcg ccgcctacct
     4801 gctggtgctt ggctgcttcg ggctgctgtc cgaagtcgtg ctcggcttcg gctggtggcg
     4861 tctgctggcg cgcggatcca ccatctccaa ccccgatagt ctgcgcagcg tgcgcgccac
     4921 cgccgaggac cgcgccctga tcggccaggg tctcgccgac gccctcaatg tgggggccta
     4981 ttgatggagt ttgcggcccg ctaccaggac ggcctcgtcg ccgagctgcg cgacgtgctg
     5041 tgcgtcatcg acctcgccgc cgaacccgtg gcgctggtga tcctcgatgg cccgacccgc
     5101 gaggtgatcg accgctggcc ggcgctcgac gtctatctgc tgcacacccg catggccgag
     5161 ctgcgcatcg gcaatcgcag gaaggccgcc ggcgcgcgcc ttgccgtcac tggtgtcacc
     5221 gacacgcgca aggccctcgg cgtcctgccg gcgctcgccc gcaaccagcg ccgcgacggc
     5281 tgggcccagt tccgcgtcgt cgcgctcgcc accgccgcgc tcgcctcggt gatcgtcgcc
     5341 tacctgttcg gcattccgct cctgtccgat cgcatcgtgc gcctcgtgcc gccgtcatgg
     5401 gagatcaagg tcggcgacac cgcggccgcc cagatcgaaa attcgatgac gggcggcaag
     5461 ggcttcgtcg cctgcgatcc cgacccgcaa agtcccgcca acctcgccat cgcccgcttc
     5521 gtgcacgatg ccttcga
//
LOCUS       DATAZA010000268         5286 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1536091, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000268 DATAZA010000000
VERSION     DATAZA010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5286
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1536091"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..926
                     /locus_tag="VHZ56_06800"
     CDS             <1..926
                     /locus_tag="VHZ56_06800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX4297713.1"
                     /translation="GNVPVSRPRWQVLAVGFRTWWPYYAMMAPALIFFFIWHYVPIWQ
                     AQMAFEQVRIIPPNFWVGWKNFGALFSSPVFYQVLLNTLIISGMKMVFVFPLPILVAL
                     LLNEVRSGPFRQAIQSAIYLPHFLGWVVIAAVFIAFLSPTDGAVNALTGMVGLPPVNF
                     MTNTNWIRWVLMASENWRSAGWDSLLYLAAVISIDPALYDAAELDGANRWQKILHVTV
                     PGIVPTIATLFILNMGLFMSAGLDQIINLQNDVNSSTIDIIDTYVYRIGLQTGNFSLA
                     TAAGLFKAVIGMILVIASHLVAKRLTGKGLW"
     gene            926..1831
                     /locus_tag="VHZ56_06805"
     CDS             926..1831
                     /locus_tag="VHZ56_06805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018430791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX4297714.1"
                     /translation="MAENNPAARTGLERVESVIITSTLVLMVVVTLQPLLNLLAISLS
                     DPSKVAGFSGLSIWPDGFSPDVWLLLLQHPNVQRGIFNSVWMTATSVVLGTIGTALMA
                     WGLSRPGLPGRRAIFIFVLVTIVFEPGIIPDYFLMKQLGLLNSPWSVIMYKVVNAWYL
                     IILVRFFEEIPQELIESAEIDGANPFQIFWMMVLPLARPALATIALFYLVFHWNEFFH
                     PMIYLSDQSKWPLQVVLRQFVIGGDKVAIVGATDANNNIGIGQINIRALKAGMVLITI
                     VPILAIYPLILKFFTKGTMTGALKG"
     gene            1929..3356
                     /locus_tag="VHZ56_06810"
     CDS             1929..3356
                     /locus_tag="VHZ56_06810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018430790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX4297715.1"
                     /translation="MLRRTLLKTTAAAAIVAAWGLPASADPTPIRFVSKDLLTTNPDD
                     VKEMQAVEAGMKAEGTDLDIQIIDMPSAGYADALSVKLLSGDIPDLIYFQGGDQKFAD
                     QGVLEDLTPWIAKEPNLKAALWPHNVARLKNYPYLLYIYPPRAPQPVMRKDWFDKLGL
                     PMPQTTDDYTKLFQAIHDADLDGDGKTGDTYGLTGYLNTDELDSIFNQAFGVTGSWMK
                     DASGAWVNARITAQQKAKIAYYAGLAAKGLFDKEYVTNTYDVKEDKFYTGKAGVIFGS
                     SPEVIDIYGGKMQQAHPDTKIQLILLPLPKGPGGQGLQAVDVSKESRGFAIASTSTHK
                     EEVAKLLDFMASKPGQDIDRMGFEGDEYTKDASGNVTFTDKFSTWYARFFAAANWTPP
                     APILGAAAQQALDNITKWFKPDNAFVWTADYAASLDATEKVYRSWVAKFITGEAGMDQ
                     WDAYVAEFNGAGNQQMTDYAKTVLK"
     gene            3353..4561
                     /locus_tag="VHZ56_06815"
     CDS             3353..4561
                     /locus_tag="VHZ56_06815"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HEX4297716.1"
                     /translation="MTMEDEGLSLRGRIRALLYGVALGDALGAPVEKLSAGEIRARYG
                     RVNSLDIAWHRMDGPEAARQGRVRGNGIVTDDTLMTLCVMNLYASERRHLDAWDMARG
                     MVREIAWTPRFVPELQREAMLIERLFYPEKWIYQRHQLAGVDPRQGGIGNMVNCGAAM
                     YIAPIGAINACDPRAAYDEAIAFASGHQQSFGLEAAGVMAAAVAAAFVPESSIDDVVD
                     AALAVAKDGTRQAIADIATVARQLKLAGAGHAEVTQVFHRIIASYSPMGDNVTHSADK
                     AGVATDAYQPSRLHSIEELPLALGFAIVNGADFRRAIEDGVNSGRDTDSIGVMTGAIL
                     GALHGEGIIADADVAVLDTANRLDLIAEADRFASAAAGIMADDSRRAAAVATDRASLL
                     DPAAADVKVA"
     gene            4582..>5286
                     /locus_tag="VHZ56_06820"
     CDS             4582..>5286
                     /locus_tag="VHZ56_06820"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018430788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HEX4297717.1"
                     /translation="MDSTAIYDRIYAGFIAKAIGVRLGAPVEPTIWTQQRIEKTYGEI
                     TQYLHKFRNFAADDDTNGPVYFIRVLRDYGLDFTAEQEGRTWLNYAAEEHGMYWWGGF
                     GRSTEHTAYLNLKNGIPAPASGAIATNGAAVAEQIGGQIFIDSWGWLNPGNPARAAEM
                     SARAASVAHDGNGLHGARFVAAAIAQAFVAKSIDEIVAAAMAQIPADSEYARVANAVI
                     GFHRAHGADWRQCLAML"
BASE COUNT          939 a         1859 c         1618 g          870 t
ORIGIN      
        1 ccgggaacgt tcccgtttca cggccccggt ggcaggtgct ggccgtcggt ttccggacct
       61 ggtggccgta ctacgcgatg atggcgccgg cgctgatttt ctttttcatc tggcactacg
      121 tgccgatctg gcaggcccag atggcgttcg agcaggtgcg catcatcccg cccaatttct
      181 gggtcggctg gaagaatttc ggcgcgctgt tttcctcgcc ggtgttctac caggtgctgc
      241 tcaacaccct gatcatctcc ggcatgaaga tggtcttcgt cttcccgctg cccatcctcg
      301 tcgctctgct gctcaacgag gttcgctcgg gccccttccg ccaggccatc cagtcggcga
      361 tctacctgcc gcacttcctg ggctgggtgg tgatcgcggc ggtgttcatc gccttcctgt
      421 cgccgaccga tggcgcggtg aatgcgctga ccggcatggt cgggctgccg ccggtcaact
      481 tcatgaccaa caccaactgg atccgctggg tgctgatggc gtcggagaac tggcgctcgg
      541 ccgggtggga cagcctgctc tacctcgccg ccgtcatctc catcgatccg gcgctctacg
      601 atgccgccga actcgacggg gccaaccgct ggcagaagat cctgcacgtc accgttccgg
      661 ggatcgtgcc gaccatcgcg acgctgttca tcctcaacat ggggctgttc atgtcggcgg
      721 gcctcgacca gatcatcaac ctgcagaacg acgtcaactc ctcgaccatc gacatcatcg
      781 atacctatgt ctaccggatc ggactgcaga ccgggaactt ctcgctcgcc accgccgccg
      841 gcctgttcaa ggccgtgatc ggcatgatcc tggtgatcgc ctcgcacctc gtcgccaagc
      901 gcctcacggg caagggtctc tggtgatggc cgagaataac cccgccgccc gcaccggact
      961 ggaacgcgtc gagagcgtga tcatcacctc gacgctggtg ctgatggtgg tggtgacgct
     1021 gcagccgctg ctcaacctgc tggccatctc gctgagcgac cccagcaagg tcgcgggctt
     1081 ttccggcctg tcgatctggc ccgacggctt ttcgcccgac gtctggctgc tgctgctgca
     1141 gcatcccaac gtgcagcgcg gcatcttcaa ctcggtgtgg atgacggcga ccagcgttgt
     1201 cctcggcacg atcggcacgg cactgatggc ctgggggctg tcgcgccccg gcctgccggg
     1261 ccgccgcgcc atcttcatct tcgtgctcgt caccatcgtc ttcgagcccg gtatcatccc
     1321 cgactacttc ctgatgaagc agctggggct gctcaactcg ccgtggtcgg tgatcatgta
     1381 taaggtggtc aacgcctggt acctcatcat cctcgtccgc ttcttcgagg agatcccgca
     1441 ggagctgatc gagagcgccg agatcgatgg cgccaacccg ttccagatct tctggatgat
     1501 ggtgctgccg ctggcccgtc cggcgctggc gaccattgcg ctgttctacc tcgtcttcca
     1561 ctggaacgag ttcttccatc cgatgatcta cctgagcgac cagtccaaat ggccgctgca
     1621 ggtggtgctg cgccagttcg tcatcggcgg cgacaaggtc gccatcgtcg gcgccaccga
     1681 cgccaacaac aacatcggca tcggccagat caacatccgc gcgctgaagg ccgggatggt
     1741 gctgatcacc atcgtgccga tccttgccat ctatccgctc atcctcaaat tcttcaccaa
     1801 gggcaccatg acgggggcgc tgaagggatg agcaacatca cgttgcggcg cgctttggcc
     1861 acacgctcag ggctgccggc cgaagatcgc caatccagca aacaacaagc ataacaggag
     1921 gagtatccat gcttcgtaga acactgctca agactaccgc ggctgccgcg atcgtcgcgg
     1981 cctggggcct gccggccagc gccgacccga cgccgatccg cttcgtcagc aaggacctgc
     2041 tgaccaccaa tcccgacgac gtcaaggaga tgcaggccgt cgaggccggg atgaaggcgg
     2101 agggcaccga cctcgacatc cagatcatcg acatgccgtc tgccggctac gccgatgcgc
     2161 tcagcgtcaa gctgctgtcg ggcgacattc ccgacctcat ctacttccag ggtggcgacc
     2221 agaagttcgc cgaccagggc gtgctcgagg acctgacgcc ctggatcgcc aaggagccca
     2281 acctcaaggc ggcgctctgg ccgcacaatg tggcgcgcct gaagaactac ccgtacctgc
     2341 tctacatcta tccgccgcgc gccccgcagc cggtgatgcg caaggactgg ttcgacaagc
     2401 tcggcctgcc gatgccgcag accaccgacg actacacgaa gctgttccag gccatccacg
     2461 acgccgacct cgatggcgac ggcaagaccg gcgacaccta cgggctgacc ggctacctca
     2521 acaccgacga actggattcc atcttcaacc aggctttcgg cgtcaccggc agctggatga
     2581 aggacgccag cggcgcctgg gtgaacgctc gcatcacggc gcagcagaag gccaagatcg
     2641 cctactacgc cggcctcgcc gcgaagggcc tgttcgacaa ggaatacgtc accaacactt
     2701 atgacgtgaa ggaagacaag ttctacaccg gcaaggccgg cgtcatcttc ggctcctcgc
     2761 cggaggtcat cgacatctat ggcggcaaga tgcagcaggc gcatccggac accaagatcc
     2821 agctgatcct gctgccgctg cccaagggcc ccggcgggca ggggctgcag gccgtcgacg
     2881 tgagcaagga atcgcgcggc tttgccatcg cgtcgacctc gacgcacaag gaggaagtcg
     2941 ccaagctgct cgacttcatg gccagcaagc ccggccagga catcgaccgc atgggcttcg
     3001 agggcgacga gtacaccaag gacgccagcg gcaacgtcac cttcaccgac aagttctcga
     3061 cctggtatgc ccgcttcttc gccgccgcca actggacgcc gccagcgccg atcctcgggg
     3121 cggccgccca gcaggcgctc gacaacatca ccaaatggtt caagccggac aatgcgttcg
     3181 tctggacggc cgactatgcc gcgtcgctcg atgccaccga gaaagtgtat cgcagctggg
     3241 tggcaaagtt catcaccggc gaggccggca tggaccagtg ggacgcctac gtcgccgagt
     3301 tcaatggcgc cggcaaccag cagatgaccg actacgcaaa gactgtcctc aaatgacgat
     3361 ggaagacgaa ggactgtccc tgcggggacg gatccgtgca ctgctctacg gcgtcgccct
     3421 cggcgacgcc cttggtgccc cggtcgagaa gctctcggcc ggggaaatcc gggcgcgcta
     3481 cggcagggtg aactcgctcg atatcgcctg gcaccgcatg gacgggccgg aggcggcacg
     3541 ccaggggcgg gtccgcggca acggcatcgt caccgacgac acgctgatga cgctgtgcgt
     3601 gatgaacctc tacgcgagcg agcggcgcca cctcgatgcc tgggacatgg ccaggggcat
     3661 ggtgcgcgag atcgcctgga cgccgcgctt cgtgcccgaa ttgcagcgcg aggcgatgct
     3721 gatcgagcgg ctgttctatc cggaaaaatg gatctaccag cgccaccagc tcgccggcgt
     3781 cgacccgcgc cagggcggca tcggcaacat ggtcaattgc ggcgccgcca tgtacatcgc
     3841 cccgatcggc gccatcaacg cctgcgaccc gcgcgccgcc tacgacgagg cgatcgcctt
     3901 cgcctccggc caccagcaga gcttcgggct cgaggcggcc ggggtgatgg ctgcggccgt
     3961 cgccgccgcg ttcgtgccgg aaagcagcat cgacgacgtg gtcgatgcgg cgctggccgt
     4021 cgccaaggac ggcacccggc aggccatcgc cgacatcgcc acggtggcgc ggcagctcaa
     4081 gctcgccggc gccggccacg ctgaggtcac gcaggtcttc caccgcatca tcgccagcta
     4141 ttcgccgatg ggcgacaacg tcacccactc cgccgacaag gcgggcgtcg cgaccgacgc
     4201 ctaccagccg tcgcggctgc attcgatcga ggagctgccg ctggcgctgg ggtttgccat
     4261 cgtcaacggc gccgatttcc gccgtgccat cgaggacggc gtcaattccg gccgcgacac
     4321 cgactcgatc ggcgtgatga ccggcgccat cctcggcgcc ctgcacggcg agggcatcat
     4381 cgccgacgcc gacgtggcgg tgctcgatac cgccaaccgg ctcgacctca tcgccgaagc
     4441 cgaccgcttc gccagcgccg ccgccggcat catggccgac gacagccgcc gcgccgccgc
     4501 cgtcgcgacg gaccgcgcca gcctgctcga tcccgccgcc gccgacgtca aggtcgcctg
     4561 aacccaccgg gacaaccgca cttggacagc accgcgatct acgaccgcat ctatgccggc
     4621 ttcatcgcca aggccatcgg cgtccgcctc ggcgcgccgg tggaaccgac gatctggacg
     4681 cagcagcgga tcgaaaagac ctacggcgag atcacccagt acctgcacaa gttccgcaat
     4741 ttcgcggccg acgacgacac caacggtccg gtgtatttca tccgcgtact gcgcgactac
     4801 ggcctcgact tcaccgccga gcaggagggc cgcacctggc tcaactacgc cgccgaggaa
     4861 cacggcatgt actggtgggg cggcttcggg cgctcgaccg agcacaccgc ctacctcaac
     4921 ctcaagaacg gcattccggc gccagcctcg ggcgccatcg ccaccaatgg cgcggcggtg
     4981 gccgagcaga tcggcggcca gatcttcatc gactcctggg gctggctgaa ccccggcaac
     5041 ccggctcgcg ccgccgaaat gagcgcccgc gccgccagtg tcgcgcatga cggcaacggc
     5101 ctccacgggg cgcgcttcgt cgctgccgcg atcgcccagg cgttcgtcgc caaatccatc
     5161 gacgagatcg tcgcggcggc gatggcgcag attcccgccg acagcgaata tgcccgcgtc
     5221 gccaacgcgg tgatcggctt ccaccgcgcc cacggcgcag actggcggca atgcctcgcc
     5281 atgctg
//
LOCUS       DATAZA010000269         3302 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2580830, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000269 DATAZA010000000
VERSION     DATAZA010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3302
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2580830"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /locus_tag="VHZ56_06825"
     CDS             <1..285
                     /locus_tag="VHZ56_06825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY-family carbohydrate kinase"
                     /protein_id="HEX4297718.1"
                     /translation="LLAVGGGSKSALWLKLIATNLDIEIALPEDGDFGGALGAARLGL
                     CAAEGADPAAVMAMPGIKQVIQPDASLRDAYTAQYARYRALYPAIEEARK"
     gene            282..1586
                     /gene="xylA"
                     /locus_tag="VHZ56_06830"
     CDS             282..1586
                     /gene="xylA"
                     /locus_tag="VHZ56_06830"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0009045 - xylose isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA];
                     GO_process: GO:0042732 - D-xylose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HEX4297719.1"
                     /translation="MTDFFKGISPVKFEGPQSANPLAFHHYNKDEMVLGKRMEDHIRP
                     AVAYWHSFAWEGGDPFGGRTFARPWYDKGLEGAKLKADIAFEFFDLLDIPFFCFHDAD
                     VAPEGATLAESNRNLRTITDIFARKMEKSRTRLLWGTANLFSNRRYMSGAATNPDPQV
                     FAYAAGQVKTMLEVTRELGGSNYVLWGGREGYETLLNTDMKQERQQAGRFLTLVVEHA
                     RKIGFKGTLLIEPKPQEPTKHQYDYDVATVYGFLKDFGLEKEVKVNIEVGHAFLAGHS
                     FEHELATARALGILGSVDANRNDLQSGWDTDQFPNNPGEMMLAFYQILKNGGLGNGGF
                     NFDAKVRRQSIDPADLFHGHIGGLDVLARGLKGAAAMISDGTYDKVLADRYAGWSAPD
                     GQAMLKSQSLADIAARVEQDNINPQPRSGQQEYLENVVNRFV"
     gene            1683..3290
                     /locus_tag="VHZ56_06835"
     CDS             1683..3290
                     /locus_tag="VHZ56_06835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 43 protein"
                     /protein_id="HEX4297720.1"
                     /translation="MPTLRNPILPGFNPDPSILRVGEDYYIATSTFEWYPGVQIHHSR
                     DLANWQLLTRPLSRKSQLDMRGDPDSCGVWAPCLSHDGTQFWLVYTDVKRKDGSFKDA
                     HNYIVTAPAIEGPWSDPVYVNSSGFDPSLFHDDDGRKWFVNMLWDHRARPLLFEGIAL
                     QELDPVAKKLVGPRRNIFTGTDLKLVEGPHLYKRNGWYYLLTAEGGTGYEHAATLARS
                     RRIDGPYELHPLKYLVTAKDTPLNPLQRAGHGDWVDTPDGRSYLVHLTGRPTTQQRRC
                     VLGRETAIQELEWRSDGWPWLKAGGNVAQLDVDVPGSRDDSNYWAEQRYDFAMGLHQD
                     FQWLRTPDTDRIFELRGRTLRLIGRESIGSWFEQALVARRQTHFSYDAAVTLDFAPTD
                     ERQYAGLTGYYSRYNFHYLTVTAHSDGRRELLIMSSIISFPDGKLEFPAAPVPIPNEG
                     PIRLRIEVRGPALQFSYALGPGDWSTIGPMLDASILSDECGGHGEHGSFTGAFVGMAA
                     SDLNGTALPADFTGFVYRPVHHETDRY"
BASE COUNT          586 a         1165 c         1028 g          523 t
ORIGIN      
        1 ctgctcgcgg tcggcggcgg ctcgaaatcg gcgctctggc tgaagctgat cgccaccaat
       61 ctcgacatcg agatcgcgct gcccgaggac ggcgatttcg gtggcgcgct cggcgccgcg
      121 cggctcggcc tgtgcgccgc cgaaggcgcc gacccggccg ccgtgatggc gatgccgggc
      181 atcaagcagg tcatccagcc ggacgcgtcg ctgcgcgacg cctacaccgc ccaatatgcg
      241 cgctaccgtg cgctctatcc cgccatcgag gaggcccgta agtgaccgat ttcttcaagg
      301 gcatttcgcc cgtcaagttc gaggggccgc aaagcgccaa cccgctcgcc ttccatcact
      361 acaacaagga cgagatggtc ctcggcaagc gcatggaaga ccacatccgc ccggccgtgg
      421 cgtattggca cagcttcgcc tgggagggtg gcgatccgtt cggcggccgc accttcgcgc
      481 gtccctggta cgacaagggc ctcgagggcg ccaagctcaa ggccgacatc gccttcgagt
      541 tcttcgacct gctcgacatt ccgttcttct gcttccatga cgccgacgtc gccccggagg
      601 gcgccacgct ggccgagagc aacaggaacc tgcgcaccat caccgacatc ttcgccagga
      661 agatggaaaa gagccgcacc cggctgctct ggggcaccgc gaacctgttt tccaaccgcc
      721 gctacatgtc cggcgccgcc accaatcccg atccgcaggt cttcgcctat gccgccgggc
      781 aggtgaagac catgctcgag gtcacccgcg agctcggcgg gtcgaactac gttctatggg
      841 gcggccgcga aggctatgag acgctgctca acaccgacat gaagcaggag cgccagcagg
      901 ccggccgctt cctgacgctg gtcgtcgagc acgccaggaa aatcggcttc aagggcaccc
      961 tgctgatcga gccgaagccg caggaaccga ccaagcacca gtacgactac gacgtcgcga
     1021 cggtctatgg cttcctcaag gatttcggcc tcgagaaaga ggtcaaggtc aacatcgagg
     1081 tcggccacgc cttcctcgcc ggccacagtt tcgagcacga gctggcgacg gcgcgggcgc
     1141 tgggcatcct cggcagcgtc gatgccaacc gcaacgacct gcagtccggc tgggacaccg
     1201 accagttccc caacaatccc ggcgagatga tgctggcctt ctaccagatc ctcaagaatg
     1261 gcgggctggg caatggcggc ttcaacttcg acgccaaggt gcgccggcag tcgatcgatc
     1321 cggccgacct cttccacggc catatcggcg gcctcgacgt gctcgcccgc ggcctcaagg
     1381 gcgccgccgc catgatcagc gacggcacct acgacaaggt gctggccgat cgctatgccg
     1441 gctggagcgc gcccgacggc caggcgatgc tgaagagcca gagcctcgcc gacatcgccg
     1501 cccgggtcga gcaggacaac atcaacccgc agcctcggtc cggccagcag gaatacctcg
     1561 agaacgtggt caaccggttc gtgtgaatcc gaccacggag ggcgccgtga cgatctccct
     1621 cccccttgcg ggggaaggga caggggtggg ggcgctgagc tccctatagt cgagggcgaa
     1681 cgatgccgac actgcgcaat cccatcctgc ccggcttcaa ccccgatccg tcgatcctgc
     1741 gggtcgggga ggactactac atcgccacct cgaccttcga gtggtatccg ggggtgcaaa
     1801 tccaccacag ccgggacctc gccaactggc agctcctcac ccgcccgctc agccgcaaga
     1861 gccagctcga tatgcgcggc gaccccgaca gctgcggcgt ctgggccccc tgcctcagcc
     1921 atgatggaac gcagttctgg ctggtctaca ccgacgtcaa gcgcaaggac ggctcgttca
     1981 aggacgccca caattacatc gtcacggcgc cggcgatcga gggaccgtgg tccgatccgg
     2041 tctacgtcaa ctcctcgggc ttcgatccct cgctgttcca cgacgacgac ggccgcaaat
     2101 ggttcgtcaa catgctctgg gaccaccgcg cccggccgtt gctgttcgag ggcatcgcgc
     2161 tgcaggagct cgacccggtc gcgaaaaagc tcgtcggccc gcgccggaac attttcaccg
     2221 gcaccgacct caagctggtc gagggcccgc acctctataa gcgcaacggc tggtactatc
     2281 tgctgaccgc cgagggcggc accggctatg agcacgccgc gaccctggcg cggtcgcgcc
     2341 ggatcgacgg gccttatgaa ctgcatccgc tcaaatacct cgtcaccgcc aaggacacgc
     2401 cgctcaatcc gctgcagcgc gccggccatg gcgactgggt cgataccccc gacgggcgga
     2461 gctacctggt gcacctgacc ggccggccga cgacgcagca gcgccgctgc gtgctgggcc
     2521 gcgagaccgc cattcaggaa ctggagtggc gttccgacgg ctggccgtgg ctgaaggcgg
     2581 gcggcaatgt cgcgcagctc gacgtcgacg tgccgggcag ccgcgacgac agcaattact
     2641 gggccgagca gcgctacgat ttcgccatgg gcctgcacca ggatttccag tggctgcgga
     2701 cgcccgacac cgaccgcatc ttcgagctcc gcggcaggac gctgcggctc atcggacgcg
     2761 aatcgatcgg cagctggttc gagcaggcgc tggtggcgcg ccggcagacg catttctcct
     2821 acgacgcggc agtcaccctc gacttcgccc ccaccgacga gcgccagtat gccgggctga
     2881 ccggctatta ttcgcgctac aatttccact atctcacggt caccgcccat tccgatggcc
     2941 ggcgcgagct gctgatcatg agctcgatca tttccttccc cgatggcaag ctggagtttc
     3001 cggcggctcc ggtgccgatc cccaacgagg gcccgatccg cctgaggatc gaggtgcgcg
     3061 gcccggcgct gcagttctcc tacgcgctgg ggccggggga ctggtcgacc atcggcccga
     3121 tgctcgatgc ctcgatcctt tccgacgaat gcggcggcca cggcgaacat ggcagcttca
     3181 ccggcgcctt tgtcggcatg gccgcttccg acctcaatgg cacggcgctc ccggccgact
     3241 tcaccggctt tgtctatcgg ccggtgcatc acgaaacgga caggtactga tgcgcgtcgc
     3301 ag
//
LOCUS       DATAZA010000270         7967 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1072443, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000270 DATAZA010000000
VERSION     DATAZA010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 7967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7967
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1072443"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..516
                     /locus_tag="VHZ56_06840"
     CDS             <1..516
                     /locus_tag="VHZ56_06840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297721.1"
                     /translation="ALEERTEARVPMDWAATEDSLGSALATLGDMNDDTGKLDDAIAA
                     FTAALTERTRDRAPEDWARTEANLGLAEKQLGARQDGTAGFDKAIVAYRAALTVFTRD
                     AAPLDWAQTEADIGIAALARADRSKSRGDLKLARDAYAAAYEVYAKMGDDYARYFKGK
                     LADIDKRLKAG"
     gene            614..1033
                     /locus_tag="VHZ56_06845"
     CDS             614..1033
                     /locus_tag="VHZ56_06845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0010257 - NADH dehydrogenase complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone oxidoreductase subunit NDUFA12"
                     /protein_id="HEX4297722.1"
                     /translation="MAQGGYKEFLIEIFAWWRGNTWGTRLWTATQGVYVGTDEVGNRY
                     YRSKKPTGPAGMERRMVVYAGGYAEATTIPPGWYGWMHYRTNVPPTEGDYTPREWEKP
                     HLQNYTGSALAYRPEGSLLNTGERPRVTDDYDAWSPE"
     gene            1018..1500
                     /locus_tag="VHZ56_06850"
     CDS             1018..1500
                     /locus_tag="VHZ56_06850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010661261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2155 domain-containing protein"
                     /protein_id="HEX4297723.1"
                     /translation="MVARIGASRTLRRSLLALLATALLAVPAAAATISNPIASFSGLD
                     KITGRITSFDVYIDETVQFGALQITPRVCYTRPPTETQRTSVFVEVDQVSLQGGTQRI
                     FTGWMFADSPALNAIDHPVYDIWLVDCKTKSDTPPPDKTNPEPAQSSAPADASSAAGQ
                     "
     gene            1655..2749
                     /locus_tag="VHZ56_06855"
     CDS             1655..2749
                     /locus_tag="VHZ56_06855"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003953 - NAD+ nucleosidase activity
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HEX4297724.1"
                     /translation="MADIFISYSRVDAPLADKVVGGLRDAGYKVWIDATGIEEGRAYD
                     RQIEQALRDCDLAVVLWSRISVDSEWVRNEAGDAYGHGKLIPLLTDDAEPPLQFRSVQ
                     AIDFRNWNGAVDARQFQQLKAALARRLAEAAGASVVEPALPEAPPVPLVRQVLERTWL
                     AFADRETERRFSAYFDARYLAQIRMYTLIVTALYCVYAVAGVVLDKFGGTSAFQLIVT
                     PVLVVAFLLSLWPPILRYWRPFVFAYGTLGALAIIFGVRKLFLPSNMSADSSSYLVGV
                     SLLAILTFIGTAPLRFPETVVICLIPYAMVWLMPQVFGIQPTDPSTLIEIITGAYVMV
                     VVAGWWRERQARTWFMETDRGRASSFSPHR"
     gene            complement(2746..3774)
                     /locus_tag="VHZ56_06860"
     CDS             complement(2746..3774)
                     /locus_tag="VHZ56_06860"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF006078.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HEX4297725.1"
                     /translation="MPETSPLDPMEARLVDALPAGEGWTFEPKWDGFRCLALKEGGAV
                     RLFAKSGKPLGRYFPDMVAALEALAADNFLLDGERVIPVGASLSFDALQMRLHPAESR
                     VRKLAAETPALLVLFDLLVADGASIAAQPLSTRRAALERFVAGAPSPSLRLSPATDDP
                     ATARGWLARAGGAIDGVVAKRLDQPYQPGERAMLKVKNIRTADCVVGGFRYASGSRLL
                     GSLLLGLYDAAGRLDHVGFTSALAGEDKAALTARLEALRGEGFTGNAPGGPSRWSTEK
                     TSDYVPLRHELVVEVSYDHVTGARFRHGTGLRRWRPDKAPRQCTYDQLQLGAPPSAPV
                     QAVLSAQP"
     gene            complement(3919..4566)
                     /gene="aat"
                     /locus_tag="VHZ56_06865"
     CDS             complement(3919..4566)
                     /gene="aat"
                     /locus_tag="VHZ56_06865"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HEX4297726.1"
                     /translation="MTRKTDPFAVELTPELILRAYQAGIFPMAEDASSDDLFWVSPQL
                     RGVIPLEAAHLSRSLRKTLRSHPYAVRVDTDFAAVIEGCATAGTERDTTWINPAIRKL
                     YGQLFERGFVHTVEVWDGAALVGGLYGVSMGAAFFGESMFHRKTDCSKIAMAGLIARL
                     RAGGYRLLDTQVVTDHLKTFGGIEIPREDYELRLADALSHEADWSAIDRAGSPGS"
     gene            4682..5389
                     /locus_tag="VHZ56_06870"
     CDS             4682..5389
                     /locus_tag="VHZ56_06870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008597253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4297727.1"
                     /translation="MSSPVIETDKTNLELMSGKSLLHILKDVSFTVMGGEVTAVVGPS
                     GSGKTSLLMVLGGLERATSGKVVVGGQDISTANEDQLAVFRRKTLGILFQNFHLIPSM
                     SALENVSLALEIAERGDSVRQVRERATAALEEVGLADRLTHLPSALSGGEQQRVGLAR
                     AMVTSPKLLLADEPTGNLDQDTGAMVIDLMFNLARQKGAAILLITHDRSLASKADRML
                     TMNHGQLTEVAKQAVPA"
     gene            5386..>7967
                     /locus_tag="VHZ56_06875"
     CDS             5386..>7967
                     /locus_tag="VHZ56_06875"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX4297728.1"
                     /translation="MSRLGGWMRVALVDLRGDLRRFGILLACLALGVGTIAGVSSVGA
                     ALKDAILRDANTLMGGDLQVNRADRRANPDELAYFKSLGEVTETITSNSRADAMDDTG
                     NTAFLDIYAVDGNYPLYGNVVSPQLTPGVKLSDLLAEKDGVYGALVDPVIFDRLNIDI
                     GGHFKVNGTEFVVNGVLGSLPNGALRGLHLGLTTLMSIEGEQANPNTRPPLPGLLTQY
                     SYKIKLNADEGDYTIVQPKVVAHFASDPAWQVQSPYDAAGTLSRFYDLFVRFLLIVGL
                     SSLLVGGVGISNAVSAYIGERQRSIATLRSLGATGARIMVHFFTQVGIMSLAGIIMGL
                     VIGALLTAIALPILGRILAVDLHPQVEWGSLATAFLFGVLAAFAFSYIPLVRAQKLRP
                     AMLFRTVGASVQSIRARDYFDPWVLLPLAIAGLAIFGLAWLTTNDFALVFYYAVGVIA
                     AFLLLSFAGRLLQYVLRTLPPMPSAAWRSAFRGIYRPGSPAPVVIMSLGLGLAMLLVI
                     VILSANLRDQLLGQVTTDAPTFVATDMFDDEIVDLGNFLNSTGFVSDFQHQPMIRAAV
                     TKVNGVASTDILKNNPNLAGEAVYMLGGSGGSPEILMTWSPTLPSDSTVTAGQWWPAN
                     YSGPPEVSLRDQDAQTLGIKIGDTVELTLFGESFDAKVANLRNFEFQSGVNFLVTASP
                     GTFADFPGTNLATIKAAKGHEKDLERALARKYPDITFLPVGEALNQAADILGQLSTAV
                     NIVGALAVINGLLVLAGTMAAGRKQREADAVVNKVLGSTRGDVVGVFALEYALLGGFA
                     ALLATLVGIAGAYGIIKGAKMDVGFGVNPTLILGVLIGSILLTIVTGAATTWSALSTK
                     PAQYL"
BASE COUNT         1261 a         2761 c         2699 g         1246 t
ORIGIN      
        1 gcgctcgagg agcggaccga ggccagggtg ccgatggact gggcggcgac cgaggacagc
       61 ctcggcagcg ccctcgcgac gctcggcgac atgaacgacg acaccggcaa gctcgacgac
      121 gcgatcgcag cgttcaccgc ggcgctgacc gagcggaccc gcgaccgcgc ccccgaggac
      181 tgggcgcgga ccgaagccaa tctcgggctg gcggaaaagc agctcggcgc gcgccaggac
      241 ggcaccgccg gcttcgacaa ggccatcgtc gcgtaccggg cggcgctgac cgtgttcacc
      301 cgggatgcgg cgccgctcga ctgggcgcag accgaggcgg acatcggcat cgccgccctg
      361 gcgcgggccg accggagcaa gagcaggggc gacctcaagc tcgctcgcga cgcctatgcg
      421 gcggcctacg aggtctacgc caagatgggc gacgactacg ccagatactt caagggcaag
      481 ctggccgaca tcgacaagcg gctgaaggcc gggtgagcgg ccgcgggcga caaactggcg
      541 ccgctgtgcg gcctaggcga ccgccggcgc aggtgctaga ggcttgggac agcaagattc
      601 ccgggttcgg caaatggcgc agggcggcta caaggaattc ctcatcgaga tcttcgcctg
      661 gtggcgcggc aacacctggg gcacccggct gtggaccgcg acgcagggcg tctatgtcgg
      721 caccgacgag gtcggcaacc gctactatcg cagcaagaag ccgacggggc cggccggcat
      781 ggagcggcgc atggtcgtct atgcgggcgg ctatgcggaa gcgacgacca tcccgcccgg
      841 ctggtacggc tggatgcatt accggaccaa tgtgccgccg acggagggcg actacacccc
      901 gcgcgagtgg gaaaagccgc acctgcagaa ctacaccggc tcggcgctgg cctaccggcc
      961 ggagggcagc ctgctcaaca ccggcgagcg cccgcgcgtc accgacgact acgacgcatg
     1021 gtcgcccgaa taggcgccag ccggacgctg cgccgctcgc tgctcgcgct gctcgccacg
     1081 gcgctgctgg cggtgccggc cgcggcggcc accatctcca atccgatcgc ctcgttctcc
     1141 gggctcgaca agatcaccgg ccggatcacc agcttcgacg tctatatcga cgagacggtg
     1201 cagttcgggg cgctgcagat cacgccgcgc gtctgctaca cgcgaccgcc caccgagacg
     1261 cagcgcacca gcgtcttcgt cgaggtcgac caggtatcgc tgcagggcgg cacgcagcgc
     1321 atcttcaccg gctggatgtt tgccgacagc ccggcgctca acgctatcga ccacccggtt
     1381 tatgacatct ggctggtcga ctgcaaaacc aagtcggaca cgccaccgcc ggacaagacc
     1441 aatcctgagc cggcacagtc gtcggcgcca gcggacgcca gcagcgccgc cggacaatag
     1501 gccgggattt gcggggcgcc tcgggcgccg atgcgcttcc gtgccgggcg aattccacca
     1561 gcgtcgcggc gatcgccttg cgcacaccgg ccggtgctgg gccgattgcc agaagcctcg
     1621 gcgctgcata gggttagcgc cgggtcgggg tggcatggcg gacattttca tcagctattc
     1681 gcgggtcgac gcgccgctgg ccgacaaggt ggtcggcgga ctgcgcgacg ccggctacaa
     1741 ggtctggatc gatgccaccg gcatcgagga gggccgcgcc tacgaccggc agatcgagca
     1801 ggcgctgcgc gactgcgacc tggcggtggt gctgtggtcg cggatttcgg tggattccga
     1861 atgggtccgc aacgaggccg gcgatgccta cggccacggc aagctgatcc cgctgctgac
     1921 cgacgatgcc gagccgccgc tgcagttccg cagcgtgcag gcgatcgatt tccggaactg
     1981 gaacggcgcc gtcgacgccc ggcagttcca gcagctgaag gcggcgctgg cgcgtcgcct
     2041 ggcggaggcg gcgggggcgt cggtggtcga gccggcgctg ccggaagcgc ccccggtgcc
     2101 gctggtccgg caggtgctcg agcggacctg gctggctttc gccgaccgcg agaccgaacg
     2161 gcgtttctcg gcctatttcg acgcccgcta cctggcgcag atccgcatgt acacgctgat
     2221 cgtaacggcg ctctactgcg tctatgcggt cgccggcgtg gtgctcgaca aattcggcgg
     2281 caccagcgcc ttccagctga tcgtcacgcc cgtgctggtg gtcgccttcc tgctcagcct
     2341 gtggccgccg atcctgcgct actggcggcc gttcgtgttc gcctatggca cgctcggcgc
     2401 gctggcgatc atcttcggcg tccgcaagct cttcctgccg tcgaacatgt cggcggattc
     2461 gagcagctat ttagtgggcg tgtcgctgct ggccatcctg accttcatcg gcacggcgcc
     2521 gctgcgcttc cccgagaccg tcgtcatctg cctcattccc tacgccatgg tctggctgat
     2581 gccgcaggtc ttcggcatcc agccgaccga tccctcgacg ctgatcgaga tcatcaccgg
     2641 cgcctacgtc atggtggtcg tcgccggctg gtggcgcgag cggcaggccc gcacgtggtt
     2701 catggagacc gaccgcgggc gcgcctcgag cttcagcccg catcgctagg gttgcgccga
     2761 aaggacggcc tgcacgggcg ccgatggcgg cgcgccgagc tgcagctggt cgtaggtgca
     2821 ttgccgcggc gccttgtcgg gccgccagcg gcggagcccg gtgccgtggc ggaagcgggc
     2881 gccggtcacg tggtcgtagc tcacctcgac caccagctcg tggcggagcg gcacgtagtc
     2941 gctcgtcttc tcggtggacc agcgtgaggg gccgccgggg gcgttgccgg taaagccttc
     3001 gccgcgcagc gcctcgagcc gtgccgtcag cgccgccttg tcctcgccgg caagggccga
     3061 cgtgaagccg acatggtcga gccggcccgc cgcgtcgtag agcccgagca gcaatgagcc
     3121 cagcagccgg ctgccgctgg cgtagcggaa gccgccgacg acgcagtcgg cggtgcggat
     3181 gttcttgacc ttgagcatgg cccgttcgcc cggctggtac ggctggtcga gccgcttggc
     3241 gacgacgccg tcgatcgctc cgccggcacg ggcgagccag ccgcgggcgg tggcaggatc
     3301 gtcggtcgcg ggcgaaagcc ggagcgacgg cgagggcgcg ccggccacga agcgctcgag
     3361 ggccgcgcgg cgtgtgctca gcggctgtgc cgcgatgctg gcgccatcgg ccaccagcag
     3421 gtcgaacagc accagcagcg ccggcgtctc ggccgccagc ttgcgcaccc ggctttcggc
     3481 gggatgcagc cgcatctgca gcgcatcgaa gctgagggag gccccgaccg gaatgacgcg
     3541 ctcgccatcg agcaggaagt tgtcggcagc gagggcctcg agcgcggcca ccatgtcggg
     3601 gaagtagcgg ccgagcggct tgccggactt ggcaaacagc cggaccgcgc cgccctcctt
     3661 gagcgccagg cagcgaaagc cgtcccattt gggctcgaat gtccagccct cgccggcggg
     3721 aagggcgtcg acaagccggg cttccatggg gtcgagcggt gacgtttcag gcatggcggc
     3781 gaacccttgg agagggtcga gcatgccacc gttcattttg ctcgaccacc gccatcggcc
     3841 ctccgcgatg caaatggcgc tgctcctggc actggcgtgg cggccgccag ccaccgcccg
     3901 gagcgaccgc ggcctcgtct agctgcccgg tgatcccgcc ctgtcgatcg ccgaccagtc
     3961 cgcctcgtgc gacagcgcgt cggcgaggcg cagttcgtag tcttcgcgcg ggatctcgat
     4021 gccgccgaag gtcttgaggt ggtcggtgac gacctgggtg tcgagcaggc gatagccacc
     4081 ggcgcgcagg cgcgcgatca ggcccgccat ggcgattttc gagcagtcgg tcttgcggtg
     4141 gaacatcgat tccccgaaga acgccgcgcc catcgagacg ccgtagaggc cgccgaccag
     4201 cgccgcgccg tcccagacct cgacggtgtg gacgaagccg cgctcgaaca gctggccgta
     4261 aagcttgcgg atcgccgggt tgatccaggt ggtgtcgcgc tccgtgccgg cggtggcaca
     4321 gccttcgatg actgcggcga aatcggtgtc gacgcgcacc gcatagggat ggctccgcag
     4381 ggtcttgcgg agcgagcgcg acagatgcgc cgcttccagc ggaataacgc cgcgcagctg
     4441 cggcgaaacc cagaacaaat cgtccgacga cgcatcctcg gccatgggga aaatgccggc
     4501 ctggtatgcg cgcaggatga gctcgggtgt cagctccacc gcaaaagggt cggttttacg
     4561 tgtcatcagc cttccgtcgg gccaaagaca gcatattggc gcgacaaatt gtattgccag
     4621 cgttcataaa ttatcgccta agaagccccc gttcgcgcaa aaacagagag tcctgccgcc
     4681 gatgtcctcg cccgtgatcg agaccgacaa gaccaacctt gagctcatga gcggcaagag
     4741 tctgctgcac atcctcaagg atgtgagctt tacggtgatg ggcggcgaag tgacggcagt
     4801 cgtcggaccc tcgggctcgg gcaagacgtc gctgctgatg gtgctgggcg gcctcgagcg
     4861 cgccaccagc ggcaaggtcg tggtgggcgg ccaggacatc tcgaccgcca acgaggacca
     4921 gctcgccgtc ttccggcgca agaccctcgg catcctgttc cagaatttcc acctcatccc
     4981 gtcgatgtcg gcgctggaga atgtcagcct ggcgctcgag atcgccgagc gcggcgacag
     5041 cgtgcggcag gtccgcgagc gcgccacggc ggcgctggaa gaagtcgggc tggccgaccg
     5101 gctgacgcat ctgccgagcg ccctgtcggg cggcgagcag cagcgcgtcg gcctcgcccg
     5161 cgccatggtg acgagcccga agctgcttct cgccgacgag ccgaccggca acctcgacca
     5221 ggacaccggc gccatggtca tcgacctgat gttcaatctc gcccgccaga agggcgccgc
     5281 gatcctgctg atcacccatg accggtcgct ggcctccaag gccgaccgca tgctgaccat
     5341 gaaccacggc cagctcaccg aagtcgccaa gcaggccgtc ccggcatgag caggctcgga
     5401 gggtggatgc gggtcgcgct ggtcgacctg cgcggcgacc tgcgccgttt cggcatcctg
     5461 ctggcctgcc tcgcccttgg cgtcggcacc atcgccggcg tgagctcggt gggcgcggcg
     5521 ctgaaggacg cgatcctgcg tgacgccaac acgctgatgg gcggcgacct gcaggtcaac
     5581 cgcgccgacc gccgggccaa tccggacgag ctcgcctatt tcaagtcgct gggcgaggtg
     5641 accgagacca tcacctccaa ttcccgtgcc gatgcgatgg acgacaccgg caacacggcg
     5701 ttcctcgaca tctatgcggt cgacggcaac tacccgctct acggcaacgt ggtcagcccg
     5761 cagctgaccc ccggcgtcaa gctcagcgac ctcctcgccg aaaaggacgg ggtgtatggc
     5821 gcgctcgtcg acccggtgat cttcgatcgg ctgaacatcg atatcggcgg ccacttcaag
     5881 gtcaacggca ccgaattcgt ggtaaacggc gtgctgggct cgttgcccaa cggtgcgctg
     5941 cgcggcctcc acctcggcct caccacgctg atgtcgatcg agggcgagca ggccaatccc
     6001 aacacccggc cgccgctgcc ggggctgctg acgcagtaca gctacaagat caagctcaac
     6061 gccgacgagg gcgactatac catcgtgcag cccaaggtcg tggcccactt tgcctccgat
     6121 ccggcctggc aggtgcaatc gccctatgac gccgcgggca cgctgtcgcg cttctacgat
     6181 ctgttcgtgc gcttcctcct gatcgtcggg ctgagctcgc tgctggtggg cggggtgggc
     6241 atctccaatg ccgtctccgc ctatatcggc gaacgacaac gctcgatcgc aacgctccgc
     6301 agcctcggcg ccaccggcgc gcgcatcatg gtgcatttct tcacccaggt cggcatcatg
     6361 tcgctggccg gcatcatcat ggggctggtg atcggcgccc tgctgacggc gatcgcgctg
     6421 cccatcctcg gccgcatcct cgccgtcgac ctgcatccgc aggtggaatg gggctcgctg
     6481 gcgacggcgt tcctgttcgg cgtgctcgcc gccttcgcct tctcgtacat cccgctggtg
     6541 cgggcgcaaa agcttcggcc cgcgatgctg ttccgcaccg tcggcgcgtc ggtgcagagc
     6601 atccgcgcgc gggactattt cgatccctgg gtgctgctgc cgctggccat cgccggcctc
     6661 gccatcttcg ggctcgcctg gctcaccacc aacgactttg ccctggtctt ctactatgcc
     6721 gtcggcgtca tcgccgcgtt cctgctgctg agctttgccg gccggctgct gcaatacgtg
     6781 ctgcgcaccc tgccgccgat gccgagcgcc gcgtggcgca gcgccttccg cggcatctac
     6841 cggccaggct cgccggctcc ggtggtgatc atgtcgctcg gcctcgggct ggccatgctg
     6901 ctggtgatcg tcatcctcag cgccaacctg cgcgaccagc tgctggggca ggtgacgacc
     6961 gacgccccga ccttcgttgc caccgacatg ttcgacgacg agatcgtcga cctcggcaat
     7021 ttcctcaact ccaccggctt cgtcagcgac ttccagcacc agccgatgat ccgcgccgcc
     7081 gtcaccaagg tgaatggcgt ggcgtcgacg gacatcctca agaacaatcc caacctcgcg
     7141 ggcgaggcgg tctacatgct cggcggcagc ggcggctcgc cggaaatcct gatgacctgg
     7201 tcgccgacgc tgccttcgga ctcgaccgtg acggccggcc agtggtggcc ggcgaactat
     7261 tccggcccgc cggaggtgtc gctgcgcgac caggacgcgc agaccctcgg catcaagatc
     7321 ggcgacaccg tcgagctgac gctgttcggc gagtcgttcg acgccaaggt cgccaacctc
     7381 cgcaatttcg aattccagag cggcgtcaac ttcctggtga cggcatcgcc cggcaccttc
     7441 gccgatttcc cgggcaccaa cctcgccacc atcaaggccg ccaagggcca cgagaaggac
     7501 ctcgagcggg ccctggcgcg gaagtatccc gacatcacct tcctgccggt gggcgaggcg
     7561 ctcaaccagg ccgccgacat cctcggccag ctgtcgaccg cggtgaacat cgtcggcgca
     7621 ctggcggtga tcaacggcct gctggtgctg gccggcacca tggcggccgg gcgcaagcag
     7681 cgcgaggccg acgcggtggt caacaaggtg ctcggctcga cccgcggcga cgtggtcggc
     7741 gtattcgcgc tggaatatgc gctgctcggc ggcttcgcgg cgctgctcgc gacgctcgtc
     7801 ggcatcgccg gcgcctacgg catcatcaag ggcgccaaga tggacgtcgg cttcggcgtc
     7861 aacccgacgc tgatcctcgg cgtgctgatc ggctcgatcc tcctgacgat cgtcaccggc
     7921 gccgcgacga cgtggagcgc gctgagcacc aagccggcgc agtatct
//
LOCUS       DATAZA010000271         2190 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3046132, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000271 DATAZA010000000
VERSION     DATAZA010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2190
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3046132"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..313
                     /locus_tag="VHZ56_06880"
     CDS             <1..313
                     /locus_tag="VHZ56_06880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SufD family Fe-S cluster assembly protein"
                     /protein_id="HEX4297729.1"
                     /translation="HAKAKGARNFTQCDSLLIGDRCGAHTVPYIESRNASAVFEHEAT
                     TSKISDDQMFYCQQRGLGEEEAVALIVNGFVRDVLQHLPMEFAVEAQKLISVSLEGSV
                     G"
     gene            338..1087
                     /gene="sufC"
                     /locus_tag="VHZ56_06885"
     CDS             338..1087
                     /gene="sufC"
                     /locus_tag="VHZ56_06885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HEX4297730.1"
                     /translation="MLEIRNLHARIEDREILKGVNLVVPAGEVHAVMGRNGSGKSTLS
                     YVLAGKAGYEVTAGEALLDGADILGLDPNERATRGLFLAFQYPVEVPGVATMTFLKAA
                     INAQRKAHGEPELTTPDFMRAVRDAGKDLHIDADMLKRALNVGFSGGEKKRAEILQMA
                     LLRPKMCVLDETDSGLDIDALKIVSEGVNALRDPRRSMLVITHYQRLLNHIVPDVVHV
                     FSDGRVVESGGKELALELEAKGYAGFDEAAA"
     gene            1084..>2190
                     /locus_tag="VHZ56_06890"
     CDS             1084..>2190
                     /locus_tag="VHZ56_06890"
                     /inference="COORDINATES: protein motif:HMM:NF013614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SufD family Fe-S cluster assembly protein"
                     /protein_id="HEX4297731.1"
                     /translation="MTVHVPVRIGPAEQKLIDQLRSRGADAAAERLAVIGLPTRKLES
                     YHYTDLKMLLRAVPELAIAEPAASEPALRIPGAHRIPMTNGVADLDGTEPAGVRVGRT
                     AGSALAERDDVLVRLNAALAAETLRLDLEGDIGTVLHLDRRTEGGPAHLNDSVHLFLA
                     DGGKATVIETFSGSDETHVSNHASDIAIGRGAELTHILLDLSGAHATSFATADYRIGE
                     RAKLRTVTIHIGSALSRINLFARFGGEGATADFTGLNLVTEGQHSDITLEVLHAVPRC
                     VSRPLFKQVARGRSKAVFQGKIVVARDAQKTDAKLMMNGLMLSDEAEILSKPELEIFA
                     DDVVCGHGSTVGALDEDSLFYLLSRGIARADAESL"
BASE COUNT          380 a          751 c          726 g          333 t
ORIGIN      
        1 ccacgccaag gccaagggcg cgcgcaactt cacccagtgc gacagcctcc tgatcggcga
       61 cagatgcggc gcccacacgg tgccctatat cgagagccgc aacgcttccg ccgtgttcga
      121 gcacgaggcg acgacgagca agatctccga cgaccagatg ttctactgcc agcagcgcgg
      181 cctcggcgaa gaggaagccg tggcgctgat cgtcaacggc ttcgtccgcg acgtgctgca
      241 gcacctgccg atggagtttg cggtcgaagc ccagaagctg atctcggtca gcctcgaagg
      301 cagcgttggc tgaaggattg aatcaatgac cacccccatg cttgaaatcc gcaacctcca
      361 tgcgcgcatc gaggaccgcg aaatcctcaa gggcgtgaac ctcgtcgttc cggccggcga
      421 ggtgcatgcc gtgatgggcc gcaacggttc cggcaagtcg acgctgagct atgtgctcgc
      481 gggcaaggcc ggctacgagg tcaccgccgg cgaagcgctg ctcgacggcg cggacatcct
      541 cggcctcgat ccgaacgagc gggcgacgcg cgggctgttc ctcgccttcc agtatccggt
      601 cgaagtgccc ggcgtcgcga cgatgacgtt cctcaaggcg gcgatcaacg cccagcgcaa
      661 ggcccatggc gagccggagc tgacgacgcc cgacttcatg cgggcggtgc gcgacgccgg
      721 caaggacctc catatcgacg ccgacatgct gaagcgcgcc ctcaatgtcg gtttctccgg
      781 cggcgagaag aagcgggccg agatcctgca gatggcgttg ctcaggccga agatgtgcgt
      841 gctcgacgag actgattccg ggctcgacat cgacgcgctg aagatcgtct ccgagggggt
      901 caacgcactg cgcgatccgc gccgctcgat gctggtgatc acccactacc agcggctgct
      961 caaccacatc gtccccgacg tggtgcacgt gttttccgac ggccgggtgg tcgagagcgg
     1021 cggcaaggag ctggcgctcg agctcgaggc caagggctat gccgggttcg acgaggccgc
     1081 cgcgtgaccg tgcacgtccc cgtccgcatc ggcccggccg agcagaagct gatcgaccag
     1141 ctgcgcagcc gcggtgccga cgccgcggcc gagcggctgg cggtgatcgg cctgccgacc
     1201 cgcaagctcg agagctacca ctataccgac ctcaagatgc tgctgcgcgc cgtgccggag
     1261 ctggcgatcg ccgaaccggc ggcgagcgag ccggcattgc gcatcccggg tgcgcatcgc
     1321 attccgatga ccaatggcgt cgccgacctc gacggcaccg aaccggccgg ggtgcgcgtc
     1381 ggccggacgg cgggctcggc gcttgccgag cgcgacgacg tgctggtccg gctcaacgcg
     1441 gcgctcgccg ccgagaccct gcggctcgat ctcgagggcg acatcggaac ggtgctccac
     1501 ctcgaccggc gtaccgaagg cggcccggcg cacctcaacg attccgtgca tctgttcctc
     1561 gccgatggcg gcaaggcgac agtgatcgag accttctccg gctcggacga aacgcacgtc
     1621 tcgaaccacg ccagcgacat cgcgatcggc cgtggcgccg aactcaccca catcctgctc
     1681 gacctgagcg gcgctcacgc caccagcttc gcgaccgccg actaccgcat cggcgagcgg
     1741 gcgaagctgc gaaccgtcac catccatatc ggctcggcgc ttagccgcat caatctgttc
     1801 gcccggttcg gcggcgaggg ggccactgcc gatttcaccg ggctcaacct cgtgaccgag
     1861 ggccagcatt cggacatcac gcttgaagtt cttcacgcgg tgccgcgctg tgtttcgcgg
     1921 ccgctgttca agcaggtggc gcgcggccgc tcgaaggcgg tgttccaggg caagatcgtc
     1981 gtcgcccgcg acgcgcagaa gaccgacgcc aagctgatga tgaacgggtt gatgctgtcg
     2041 gacgaagcgg aaatcctgtc gaagcccgag ctcgagattt tcgccgacga cgtggtctgc
     2101 ggccatggct cgaccgtcgg tgcgctcgac gaggactcgc tgttctacct gctgagccgc
     2161 ggcatcgcgc gcgccgacgc cgagagcctg
//
LOCUS       DATAZA010000272         9844 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3511011, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000272 DATAZA010000000
VERSION     DATAZA010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 9844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9844
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3511011"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..3340
                     /locus_tag="VHZ56_06895"
     CDS             <1..3340
                     /locus_tag="VHZ56_06895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003682 - chromatin binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0007076 - mitotic chromosome condensation
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chromosome segregation SMC family protein"
                     /protein_id="HEX4297732.1"
                     /translation="LRWVMGESSYKAMRASGMDDVIFSGSGNRPARNSAEVTLVLDNA
                     DRTAPAAINDSDVLEVTRRIEREEGSVYRVNGREVRARDVQLLFADASTGAHSPALVR
                     QGQIGELIAAKPQQRRALLEEAAGISGLHSRRHEAELRLKGAEQNLERVEDVITQVTQ
                     QLEQLKRQARLATRYRGLSGEIRKAEAMLFHLRWIAARAAENETEADQGRLVNALADA
                     QHVDIEAQKIVMLADQAVQPLRDREAAAGAALQRLTILAEQLAEEARRAEARRQELSE
                     RIRQTENDGARERALLGESDQALGAMAEETARLEAEAAGEEAAFALAKAAADAAQIAV
                     RAAEAEARIAADLEAQVKARRAQARRGAEDAATRIARLSQQLADVARDAEGVARQLEA
                     DDGVTARRGALEAAQALSADAEAAALGAEDATRQAQAVLEAARPKLQDMETALNRLEA
                     EAQTLNRILNGGAKGLWTAIADELRVEAGYETALGAALGDDLEASSDAGAPLHWAGPI
                     PSDGDPALPGGALPLSIYVSGSVLLKRRLDQIGLVDKTDGARLQAQLRPGQRLVSKAG
                     DLWRWDGFVSAADAPSAAAQRLAQRNRLAELDAELSEARAARNSLKTDAAALAESLEQ
                     ARQSERQKRDAWRSAQREIAAAQSTLDQAQRAVGELASRQSALEEARVRLGSSLSEAQ
                     AIEADAQRALSEAGDESEAAGLSHSKQTQLEEARGGADQARLTLGTFEQAARVRTTRL
                     GQIGSETANWTRRRQGAATQVETLDSRLMELGGQLAALSEAPAGLAQRQEAIDGEIAT
                     ARTAHGSASDALATAQATHREADKAQRLAAEALSGFRENLARVEERLKGLIAQRHQIE
                     RQVQETLDIAAPETAQAAGIRPQDTLPEEDAVERKVDRLKAERERLGGVNLAAETESV
                     EVQEKHDIMVRDRDDLVAAIAKLRSGIQSLNKEGRVRLAEAFEKVNGHFRELFTTLFG
                     GGAAELQFIESEDPLEAGLEIIARPPGKKPASISLLSGGEQALTAMSLIFAVFLTNPA
                     PICVLDEIDAPLDDANVERFCKLLSSMAERTETRFVVITHNPITMAQMDRLFGVTMYE
                     RGVSQLVSVDLTGAMQVQDTAVAV"
     gene            complement(3337..5217)
                     /locus_tag="VHZ56_06900"
     CDS             complement(3337..5217)
                     /locus_tag="VHZ56_06900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297733.1"
                     /translation="MGAVGEGSWADSAALRPVRATLARLAPWLGWLCLATALGLVLLN
                     YSDLIQAFLQRGPDGVASFAVYRSLNTLGGPWQVPLLTLAPVLALVGIGLLRRRNWIR
                     WVGGGAIVVAALMLVMGQMLMRFGDVPGVSPGFLLLPLAALPLLLMGPVAPPPGPPRR
                     LPVDWPARVAGTVLLYYGIMVGLIFIWGGHFIYGLRAFAEPRFLASYVNIDVLPVAFA
                     LGLIAAGIGITLRRRWASPLAGFIGVFGVSFVLMDWIRGWNSVALPVHLAVIAIVGIA
                     LLLRRPQPVPPAPGPMPARPQGYPTIVPPADGNWTAMLLAALHDDAYRPPRPHVRLAT
                     IGFLAVFVIYLLPATILRHSTFPTLELAIYLPIGWTALGLLVANPLARYFGRQIAASR
                     SRTAEQQLAAAGGRPPVLYLRSFALDEAVARPTWWEIFLGGRGIASAEAILVSQLQRL
                     GPIVAIGRPGEKMTSLGAARFYATDATWQDKVALCAAASQLVVWTTGTSPGLAWEADY
                     LVARVPHHKVAVWAHPHLLRVGQREREAEWTVFRDTLGTRFPKPFPERLGRTRFFLLA
                     PDGTPVPVASQHWSLSILIRTVFRGSLEAARQRQAVLAIVRLRGQTAVDAPLPAPAAA
                     TA"
     gene            5477..5860
                     /locus_tag="VHZ56_06905"
     CDS             5477..5860
                     /locus_tag="VHZ56_06905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007196428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HEX4297734.1"
                     /translation="MSEPRDGKRPESSSDGQRATADLEARIARAQARRPVDPGPSQVR
                     QGNMSGLSLGWRLGSEFIAAILVGAGLGYLVDMFLPTRPWGLVVLLLLGFVAGVLNMV
                     RATKEMNAASAVPPGTPAVRDDDDD"
     gene            5875..6660
                     /locus_tag="VHZ56_06910"
     CDS             5875..6660
                     /locus_tag="VHZ56_06910"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEX4297735.1"
                     /translation="MHVAEAPIEPIHQFRIYNLFDLGTFGGSGAAGSGTTIAFTNSAL
                     FMVLILAVITAFLVLGSSRRAIIPGRMQLMAEMTYEFIANMVRNTAGTEGMRFLPFVF
                     SLFMFVLVANLFGMFPYFFTVTSHLIITAAMAITVFLTVVIYGFYKNGPKFLKLFVPS
                     GIPAFILPVVVPIEIISFLTRPLSHSLRLFGNILGGHIVLKVFAGMVVALLAAGWWAP
                     VGILPFAMTVALTPLELLVAVLQAFVFAVLTCVYLHDAIHPGH"
     gene            6711..6950
                     /locus_tag="VHZ56_06915"
     CDS             6711..6950
                     /locus_tag="VHZ56_06915"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEX4297736.1"
                     /translation="MDPEAAKLLGKLIGAGIACVGMGGAGIGVGVIFGQYLSGALRNP
                     AAAASQYTNLIFGFALTEALGIFSLLIALLLLFVV"
     gene            7002..7631
                     /locus_tag="VHZ56_06920"
     CDS             7002..7631
                     /locus_tag="VHZ56_06920"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008839272.1"
                     /note="Produces ATP from ADP in the presence of a proton
                     gradient across the membrane. Subunit B' is part of the
                     membrane proton channel; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP F0F1 synthase subunit B"
                     /protein_id="HEX4297737.1"
                     /translation="MTDAILMAQAASSVSPADAVQAGVVQAASSAPALAQATSASTEA
                     SQALPFPPFDVSTFPSQLIWFAIIFGALYLVMSRLAVPQIGSIIDKRKARIDGDLREA
                     QRLKGETDKAIAAYEAALAEARKNAHGIAEETRGSIKADLDGKRKTVEEDLSKKVAEA
                     EARIQANKTAALGRVGEIAADTTAALVTRLTGEANPADVTAAVAEAVKG"
     gene            7635..8123
                     /locus_tag="VHZ56_06925"
     CDS             7635..8123
                     /locus_tag="VHZ56_06925"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129706.1"
                     /note="Produces ATP from ADP in the presence of a proton
                     gradient across the membrane. Subunit B is part of the
                     membrane proton channel; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP F0F1 synthase subunit B"
                     /protein_id="HEX4297738.1"
                     /translation="MVFDFDETFWAMIALFVFIGVVLYLKVPGMISKALDGRIKAIEG
                     ELAEAERLRLEAKFLLEEYESKRQAATSEAESIVAAAREEAFRLTAEAKTSLEALIVR
                     RTKAVEDKIAQAESQAVADVRSRSADVAVEAARLLLTRQMGQKGGALIDQAIKDVGTK
                     LN"
     gene            complement(8196..9254)
                     /locus_tag="VHZ56_06930"
     CDS             complement(8196..9254)
                     /locus_tag="VHZ56_06930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2332 family protein"
                     /protein_id="HEX4297739.1"
                     /translation="MTAPTERILKQFADQATVCDKLGSPFTARLCRVLAARLDMTSRF
                     GARILDWPGDPYADNLALRACGALHALARTGWEPQLAAVYPPHDAPEHTLWVAIADAL
                     TRHSNFLTDRLSSPPQTNEVARSGLLLGAMLTIAGRTGLPLELYEIGASAGLNLGFDA
                     YSYTLGEGRTWGRPDAPLGIDCPWRGAAPPLDAPLRVAGRHGCDLNPLDPANAADRER
                     LLSYVWADQAERLQRLTAALKLAAAARRVVDRADAADWLDRQFAAPHPAGVVRVLYHT
                     IVWQYLPAEVQARIEALLHRLGAAATADRPLARVAFEQDGQPARGGRIDLTLWPEGRT
                     VTLGRGDFHGRWAEWGSA"
     gene            complement(9317..>9844)
                     /locus_tag="VHZ56_06935"
     CDS             complement(9317..>9844)
                     /locus_tag="VHZ56_06935"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995605.1"
                     /note="acts in conjunction with GvcH to form
                     H-protein-S-aminomethyldihydrolipoyllysine from glycine;
                     forms a heterodimer with subunit 1 to form the P protein;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HEX4297740.1"
                     /translation="RICAFNGQMGMYVRALTYMLSHGGDGLAQAAKDAVLNANYVKAR
                     LADSFSVPFAAAGFCMHEALFDDHFLEGTGVTTLDFAKALIDEGFHPMTMYFPLVVHG
                     AMLVEPTESEPKQTLDHFCDVMLELAADARAGNAVRFTSAPTRAPRRRLDETRAARQP
                     RLKWEPPAALPQAAE"
BASE COUNT         1659 a         3144 c         3749 g         1292 t
ORIGIN      
        1 gctgcgctgg gtgatgggcg aaagctcgta caaggcgatg cgcgcctcgg gcatggacga
       61 cgtgatcttt tcgggctcgg gcaaccggcc ggcgcgcaat tcggcggaag tgacgctggt
      121 gctcgacaat gccgaccgca cggcgccggc ggcgatcaac gattcggacg tgctcgaggt
      181 gacgcgccgg atcgagcgcg aagaaggctc ggtgtatcgg gtcaacggcc gcgaagtgcg
      241 ggcccgggac gtgcaattgc tgttcgccga cgcctcgacc ggcgcgcatt cgccggcgct
      301 ggtgcggcag gggcagatcg gcgagctgat cgcggccaag ccgcagcagc ggcgggcgct
      361 gctggaggaa gcggcgggga tttccggact gcattcgcgc cggcacgagg cggaactccg
      421 gctcaagggc gccgagcaga acctcgagcg ggtcgaggac gtgatcacgc aggtgacgca
      481 gcagctcgag cagctgaagc ggcaggcgcg gctggcgacg cggtatcgcg ggctcagcgg
      541 cgaaatccgc aaggccgagg cgatgctgtt ccacctgcgc tggatcgcgg cgcgggcggc
      601 ggagaacgag accgaggcgg accagggccg gctggtcaac gcgctggccg atgcgcagca
      661 cgtcgacatc gaggcgcaga agatcgtcat gctcgccgac caggcggtgc aaccgctgcg
      721 cgaccgcgag gcggcagcgg gcgcggcgct gcagcggctg accatcctcg ccgagcaact
      781 ggccgaggaa gcgcggcggg ccgaggcgcg gcggcaggaa ctaagcgagc gcatccggca
      841 gaccgagaac gatggagcgc gcgagcgggc gctgctgggc gaaagcgacc aggcgctcgg
      901 cgcgatggcc gaggagacgg cgcggctcga ggcagaagca gcgggcgagg aagcggcgtt
      961 cgccctggcc aaggcggcgg ccgatgcggc gcagatcgcg gtgcgggcgg cggaggccga
     1021 agcgcgcatc gccgccgacc tcgaagcgca ggtcaaggca cggcgggcgc aggcgcggcg
     1081 cggcgcggaa gatgcggcga cccgcatcgc ccggctgagc cagcagctcg ccgacgtggc
     1141 gcgcgatgcc gagggcgtgg cgcggcagct cgaggccgac gacggggtga cggcgcggcg
     1201 cggcgcgctc gaggcggcac aggcgctgtc ggcggacgcc gaggcggcag cgctgggcgc
     1261 cgaggacgcg acccggcagg cgcaggcggt gctcgaagcg gcgcggccga agctgcagga
     1321 catggagacg gcgctcaacc ggctcgaggc cgaggcgcag accctcaacc gcatcctcaa
     1381 tggcggggcc aaggggctgt ggacggcaat cgccgacgaa ctgcgcgtgg aagcgggata
     1441 cgagacggcg ctgggggcgg ccttgggcga cgacctcgag gcgtcgtcgg acgctggagc
     1501 gccgctccac tgggctgggc cgatcccgag cgatggcgat ccggccctgc cgggcggcgc
     1561 cttgccgctc agcatctacg tctcgggcag cgtgctgctg aagcgccggc tcgaccagat
     1621 cggattggtc gacaagaccg acggggcgcg gctgcaggcg cagctgaggc cggggcagcg
     1681 gctggtcagc aaggccggcg atctgtggcg ctgggacggg ttcgtttcgg cggcggatgc
     1741 gccgagcgcg gcggcgcagc ggctggcgca gcgcaatcgc ctggccgaac tcgacgccga
     1801 gctgagcgag gcgcgcgcgg cgcgcaattc gctcaagacc gatgcggcgg cgctggccga
     1861 gagcctcgag caggcgcggc aaagcgagcg gcagaagcgc gacgcctggc gttcggcgca
     1921 gcgcgagatc gcggcggcgc agtcgacgct cgaccaggcg cagcgcgccg tgggcgagct
     1981 ggcatcacgg cagagcgcgc tcgaggaagc gcgggtgcgg ctcggctcgt cgctgagcga
     2041 agcgcaggcg atcgaggccg atgcgcagcg ggcgctgtcg gaggcgggcg acgagagcga
     2101 agcggccggc ctgtcgcaca gcaagcagac acagctcgag gaggcgcgcg gcggggccga
     2161 ccaggcacgg ctgacgctcg gcacgttcga gcaggcggcg cgggtgcgca cgacgcggct
     2221 cggccagatc ggcagcgaga cggcgaactg gacgcggcgg cggcaagggg cggcgacgca
     2281 ggtcgaaacg ctcgacagcc ggctcatgga actgggcggg cagctggcgg cgctgagcga
     2341 ggcgccggcc gggctggcgc agcggcagga agccatcgac ggcgagatcg caacggcgcg
     2401 gacggcgcat ggctcggctt cggatgcgct ggcgacggcg caggcgacgc atcgggaggc
     2461 cgacaaggcg cagcggctcg cggccgaggc gctgagcggc ttccgcgaga acctggcgcg
     2521 ggtcgaggag cggctcaagg ggctgatcgc gcagcgccac cagatcgagc ggcaggtgca
     2581 ggagacgctc gacatcgccg cgccggagac ggcgcaggcg gcgggcatcc ggccgcagga
     2641 cacgctgccc gaggaagacg cggtcgagcg caaggtcgac cggctgaagg cggagcggga
     2701 gcggctgggc ggggtcaacc tcgcggccga gaccgagagc gtcgaggtgc aggaaaagca
     2761 cgacatcatg gtgagggacc gcgacgatct ggtcgcggcg atcgccaaac tccgctccgg
     2821 catccagagc ctcaacaagg aaggccgcgt gcggctggcc gaggcgttcg agaaggtcaa
     2881 cgggcacttc cgcgagctgt tcacgacgct gttcggcggc ggcgcggcgg agttgcagtt
     2941 catcgagagc gaggatccgc tggaagcggg cctcgagatc atcgcgcggc ccccaggcaa
     3001 gaagccggcc tcgatctcgc tgctgtcggg cggcgagcag gccctcaccg cgatgtcgct
     3061 gatctttgcg gtgttcctca ccaatccggc gccgatctgc gtgctcgacg aaatcgatgc
     3121 cccgctcgac gatgccaatg tcgagcgctt ctgcaagctg ctcagcagca tggccgagcg
     3181 caccgagacg cggttcgtgg tgatcaccca caatccgatc accatggcgc aaatggaccg
     3241 gctgttcggc gtcaccatgt acgagcgcgg cgtgagccag ctggtgtcgg tcgacctcac
     3301 cggcgcgatg caggtgcagg acactgcggt cgcggtctag gccgtcgcgg cggccggtgc
     3361 cggcaacggc gcgtcaaccg ccgtttgtcc gcgaagcctg acgatagcca gcaccgcctg
     3421 ccgctggcgg gccgcctcga ggctgccgcg aaataccgtc cggatcagga tcgacagcga
     3481 ccagtgctgg ctcgcgaccg ggactggcgt gccatccggc gcgagcagga agaagcgggt
     3541 gcggccgagg cgttcgggaa acggcttggg gaagcgcgtg cccagggtgt cgcggaatac
     3601 cgtccattcg gcctcgcgct cgcgctggcc gacacgcagc aggtgcggat gggcccagac
     3661 ggcgaccttg tgatgcggga cgcgggcaac gagatagtcg gcctcccagg cgaggccggg
     3721 gctggtgccg gtggtccaga ccacgagctg ggaagcggcg gcgcagagcg cgaccttgtc
     3781 ctgccaggtg gcatcggtgg catagaagcg ggcggcgccg agcgaggtca tcttctcgcc
     3841 gggtcggccg atggcgacga tcgggccaag ccgctgcaac tggctgacga ggatcgcctc
     3901 ggccgacgcg atgccccggc cgccgaggaa tatctcccac caggtggggc gggcgaccgc
     3961 ctcgtccagc gcaaacgagc ggaggtagag gacgggtggg cggccgccgg cggctgccag
     4021 ttgctgctcc gccgtccggc tgcgggaggc ggcgatctgc cgtccgaaat agcgcgccag
     4081 cggattggcg acgagcaggc cgagcgcggt ccagccgatc ggcaggtaga tcgccagctc
     4141 gagcgtgggg aaagtgctgt ggcgaaggat cgtagccggc agcaggtaga tcacgaacac
     4201 ggcaagaaag ccgatcgtgg cgagccgcac atgcggccgc ggcgggcggt aggcgtcatc
     4261 gtggagagcg gcaaggagca ttgccgtcca gttgccgtcg gccggcggga cgatcgtggg
     4321 atagccttgc gggcgcgccg gcatgggtcc gggtgccggc ggcaccggtt gcgggcggcg
     4381 cagcaggagg gcgatcccga cgatggcgat aaccgcgagg tgaaccggca gcgccacgga
     4441 gttccagccc ctgatccagt ccatgaggac gaaggacacg ccgaacaccc cgatgaatcc
     4501 ggcaagcggg cttgcccagc gccgccgcag ggtgatgccg ataccggccg caatgaggcc
     4561 gagggcgaag gcgactggca gcacgtcgat gttgacatag gaggcgagga accgcggctc
     4621 cgcaaatgcg cgcagcccgt agatgaagtg tccgccccag atgaagatca gaccgaccat
     4681 gatcccgtaa tacagcagga cggtgccggc gacacgggcg ggccagtcga ccggcaggcg
     4741 ccgcggtggt cccggcggcg gcgcgacggg ccccatcagc agcaatggca gcgcagcgag
     4801 cggcaacagc aggaagcccg gagaaacacc gggaacgtcg ccgaaccgca tcagcatctg
     4861 ccccatcacc agcatcagcg ccgccacgac aatcgctccg ccgccgaccc agcgaatcca
     4921 gttgcggcgc cgaagcaggc cgatgccgac aagcgcgagg accggggcga gggtcagcag
     4981 cggcacctgc cagggaccac cgagagtgtt taacgagcgg tacacggcga agctggccac
     5041 gccgtccgga ccgcgctgca ggaacgcctg gatgaggtcg gaatagttca ggagaaccag
     5101 gccgagggcg gtggcgaggc agagccagcc gagccacggc gcgagacgcg ccagcgtcgc
     5161 gcggaccggg cgaagcgcgg cggagtccgc ccatgagcct tcgccgactg cccccatcca
     5221 acgcccctgc cccgagaccg atgacagagg actaatccag ttgcgcggcg cggccaaggc
     5281 ggcggcagat tctccggttg gcgcaaagcc cgggccggcg caatgtcgcg gggacagcgc
     5341 gacgcgaaat atcgtttggc atcaatcggt tagcatcgat cttgcgcgct tgacacccaa
     5401 aagagtcaac actatgttgc gcgcgacttt gagggcataa atttcctttt gtgccggggc
     5461 ccagcgaggg gacgcgatga gcgaaccgcg tgacggcaag cgcccggaaa gcagctcgga
     5521 cgggcagagg gccacggccg atctggaggc gcgcatcgcc cgcgcgcagg cgcgacgccc
     5581 ggtcgatccg ggaccgtcgc aagtgcgtca gggcaacatg tcggggctga gccttgggtg
     5641 gcggctcggg tccgagttca tcgcggcgat cctcgtcggg gcgggcctcg gatatctggt
     5701 cgacatgttc ctgcccacgc gaccctgggg gctcgtcgtg ctgttgctgc tcggcttcgt
     5761 tgccggggtg ctcaacatgg tgcgggcgac caaagagatg aatgccgcca gcgcggtgcc
     5821 gccgggcacg ccggcggtgc gagacgacga tgacgactga accggaccga agggctgcac
     5881 gtggctgaag caccgatcga accgatccac cagttccgga tctacaatct cttcgacctc
     5941 ggcacgtttg gcggcagcgg tgccgccggc agcggcacga ccatcgcctt caccaactcg
     6001 gcgctgttca tggtgctgat cctggcggtg atcacggcgt tcctggtgct cggcagcagc
     6061 cgccgggcga tcatccccgg ccggatgcag ctgatggcgg agatgaccta cgagttcatc
     6121 gccaacatgg tgcgcaatac ggcgggcacc gaaggcatgc gcttcctgcc attcgtgttc
     6181 tcgctgttca tgttcgtcct cgtggccaat ctctttggca tgttcccgta cttcttcacg
     6241 gtgaccagcc acctgatcat caccgccgcg atggcgatca cggtgttcct gaccgtggtg
     6301 atctacggct tctacaagaa cggtccgaaa ttcctcaaac tgttcgtgcc gtcgggcatc
     6361 ccggccttca tcctgccggt ggtggtgccg atcgagatca tctcgttcct cacccgcccg
     6421 ctcagccact cgctgcgact gttcggcaac atcctcggcg gccacatcgt gctgaaggtg
     6481 ttcgccggca tggtggtggc gctgctcgcc gccggctggt gggcgccggt cggcatcctg
     6541 ccgttcgcga tgaccgtcgc gctgacgccg ctcgagctgc tggtggcggt gctgcaggct
     6601 ttcgttttcg ccgtgctgac ctgcgtgtac ctgcacgacg ccatccatcc cggccactga
     6661 tccggccggt tcaaccaaaa cagaattcca gacaccaagg agactgacgt atggatcccg
     6721 aagcagcaaa gttgttgggc aaactgatcg gtgcgggcat cgcctgcgtc ggcatgggcg
     6781 gcgccggtat cggcgtgggc gtgatcttcg gccagtacct gtcgggcgcc ctgcgcaatc
     6841 cggcggcggc agccagccag tacaccaacc tgattttcgg cttcgccctg accgaagcac
     6901 tcggcatctt ctcgctgctg atcgccctgc tgctgctgtt cgtggtctga gacgaacgga
     6961 tgcgcagagc cggccgcaac ggaacagcgt ggtgaggaac gatgactgac gccatcctga
     7021 tggcacaggc cgcttcatcg gtcagcccgg ccgatgccgt gcaggccgga gtggtgcagg
     7081 cggcatcgtc ggcgcccgcc ttggcgcagg cgacttccgc cagcaccgag gcgagccagg
     7141 cgctgccgtt cccgccgttc gacgtcagca cgttcccgag ccagctgatc tggttcgcga
     7201 tcatcttcgg ggcgctctac ctggtgatga gccggctggc ggtgccgcag atcggctcga
     7261 tcatcgacaa gcgcaaggcg cggatcgacg gcgacctgcg ggaagcccag cggctgaagg
     7321 gcgagaccga caaggcgatc gcggcctacg aggcggcgct ggcagaggcg cgcaagaatg
     7381 cccacggcat cgccgaggag acgcgcggca gcatcaaggc cgacctcgac ggcaagcgca
     7441 agacggtgga ggaggacctg agcaagaagg tcgccgaagc cgaggcgcgc atccaggcca
     7501 acaagacggc ggcgctggga cgcgtcggcg agattgcggc cgacacgaca gcggcgctcg
     7561 tgacgcggct gacgggcgaa gccaacccgg ccgacgtcac tgccgcggtt gccgaagcgg
     7621 tcaaggggta agccatggtg ttcgatttcg acgagacgtt ctgggcgatg atcgccctct
     7681 tcgtcttcat cggcgtggtg ctctacctca aggtgccggg gatgatctcc aaggcgctcg
     7741 acgggcgcat caaggcgatc gagggcgaac tggcggaagc cgagcggctg cggctcgagg
     7801 cgaaattcct gctcgaggaa tacgagagca agcgccaggc ggcgaccagc gaggccgaga
     7861 gcatcgtcgc agcggcgcgc gaggaagcgt tccggctgac ggcggaagcc aagacttcgc
     7921 tcgaggcgct gatcgtgcgg cgcaccaagg cggtcgagga caagatcgcg caggccgagt
     7981 cacaggcggt cgcggacgtg cggtcgcgct cggccgacgt tgccgtcgag gcggcgcggc
     8041 tgctgctgac ccggcagatg ggccagaagg gcggcgcgct gatcgaccag gcgatcaagg
     8101 acgtcggcac gaagctcaac tagggcggcg cgtcaggttt ggaaggatcg aaggcgggcc
     8161 acggtccgcc tttttgtttg ccgctcgctc gggggctagg ccgagcccca ctcggcccag
     8221 cggccatgga aatcgccgcg gccgagcgtg acggtgcggc cctccggcca gagcgtcagg
     8281 tcgatgcggc cgccgcgggc cggctggccg tcctgctcga aggccacgcg cgccagcggc
     8341 cggtcggcgg tcgcggcggc cccgaggcga tgcagcagcg cctcgatgcg cgcctgcacc
     8401 tcggcgggaa gatattgcca gacgatggtg tgatagagga cgcggacgac gcccgccgga
     8461 tgcggcgcgg cgaactggcg atccagccag tcggcggcat cggcgcgatc gaccacccgc
     8521 cgtgccgctg ccgcgagctt caaagccgca gtgagccgct gcaggcgctc cgcctggtcg
     8581 gcccacacgt aggagagcag ccgctcgcgg tcggcggcat tcgccggatc gagcggattg
     8641 aggtcgcagc cgtggcggcc ggcaacgcgc agcggcgcgt cgagtggcgg ggccgcgccg
     8701 cgccacgggc agtcgatgcc gagcggcgcg tccgggcggc cccaggtccg gccctcgccg
     8761 agggtgtagc tgtaggcgtc gaagccgaga ttgaggccgg cgctggcgcc gatctcgtag
     8821 agctcgagcg gcaggccggt gcggccggca atcgtcagca tggcgccgag cagcaggccc
     8881 gagcgggcca cctcgttggt ctgcggcgga ctcgagaggc ggtcggtgag gaaattgctg
     8941 tggcgggtga gcgcatcggc gatggcgacc cagagcgtgt gctcgggcgc atcgtgcggc
     9001 ggatagacgg cggcgagctg cggctcccag ccggtgcggg ccagcgcatg cagcgcgccg
     9061 caggcgcgca gggcgaggtt gtcggcatag ggatcgccgg gccagtcgag gatgcgcgcg
     9121 ccgaaccggc tggtcatgtc gaggcgcgcc gccagcacgc ggcacagccg ggccgtgaac
     9181 ggcgagccga gcttgtcgca gacggtggcc tggtcggcga actgcttgag gatacgttcc
     9241 gtgggcgcgg tcatcgattc ctgtcccttc ccggctcaca atagccgggt cggaatcgga
     9301 ggtccaatgg ccgccgctat tcggcagcct gcggcagcgc cgccggcggc tcccatttga
     9361 gccgcggctg gcgggccgcg cgggtttcgt cgagccgccg gcgcggggca cgggtgggcg
     9421 ccgaagtgaa gcggacggca ttgcccgccc tggcgtcggc cgcaagctcc agcatgacgt
     9481 cgcagaaatg gtcgagggtc tgcttcggct cgctctcggt cggctcgacc agcatggcgc
     9541 catggaccac cagcgggaag tacatggtca tcgggtggaa gccctcgtcg atcagggcct
     9601 tggcgaaatc gagcgtggtg acgccggtgc cttcgaggaa atgatcgtcg aacagcgcct
     9661 cgtgcatgca gaagcctgcc gcagcgaacg gcaccgagaa gctgtcggcg agccgggcct
     9721 tgacgtagtt ggcgttgagg acggcgtcct tcgcggcctg ggcgaggccg tcgccgccgt
     9781 ggctcagcat gtaggtgagc gcgcggacgt acatgcccat ctggccgttg aacgcacaga
     9841 tgcg
//
LOCUS       DATAZA010000273         3290 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2581129, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000273 DATAZA010000000
VERSION     DATAZA010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3290
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2581129"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..205)
                     /locus_tag="VHZ56_06940"
     CDS             complement(<1..205)
                     /locus_tag="VHZ56_06940"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX4297741.1"
                     /translation="MFAPKSTTAMIPAEDIERAKRWYAEALGFRPSKEQGQTGAEYTL
                     PGGLHAFLYATQFAGTAQHTLISF"
     gene            complement(266..976)
                     /locus_tag="VHZ56_06945"
     CDS             complement(266..976)
                     /locus_tag="VHZ56_06945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019857892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIM24 family protein"
                     /protein_id="HEX4297742.1"
                     /translation="MSVTMANELPTLLPTQAHDETFAGVTYHLDGELVPVLTVDVSRQ
                     SVFFEHHILLWKNPQVKVALRPMKGALKRMMAGMQIFVTEASGPGMIAFSRDGAGHIA
                     PIHLRAGQEIDVREHQFLAATGGIEYTFARVRGVANMLFSSTGFFIDKFRASGDGIVW
                     VHGYGNVFEKTLGPNEQIDIEPGGWLYKDPTVRMDTVIDKLSSGLFGAAGNLIVNRFT
                     GPGRVGLQSMYLHYPTEE"
     gene            complement(1068..2159)
                     /locus_tag="VHZ56_06950"
     CDS             complement(1068..2159)
                     /locus_tag="VHZ56_06950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003526569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase family protein"
                     /protein_id="HEX4297743.1"
                     /translation="MGKRDYSLTGVDTAAAVANGLAAAEWYHTDVPRQQMKELMQRSD
                     GPALRDTALWVLAFVVTAAGGIWLWGSWWCVPFWLAYGVLYGSSTDSRWHECGHGTAF
                     KTPWMNRAIYQIACFMVMRNPTVWRWSHARHHADTIIVGRDAEIAVMRPPDLLRVLLA
                     FIGVVDAWTALSDMVRYSFGRLNAGEESFIPAMERPRVFFVARVWVVIYLAVIALALL
                     TRSWIPIVMVGTPRLYGAWHMVMCGVLQHGGLADNVTDHRLNSRTVYMNPISRFIYWN
                     MNYHVEHHMFPMIPYHALPRLHALIKHDLPPPNRSILDGYREMVPAFLRQLRYEDYYL
                     RRELPPTAKPYRDELHRLDVAGGVARPAE"
     gene            2360..>3290
                     /gene="iolG"
                     /locus_tag="VHZ56_06955"
     CDS             2360..>3290
                     /gene="iolG"
                     /locus_tag="VHZ56_06955"
                     /EC_number="1.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017274410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050112 - inositol 2-dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0019310 - inositol catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol 2-dehydrogenase"
                     /protein_id="HEX4297744.1"
                     /translation="MTIRFALLGAGRIGKVHAKAITSNPAAKLVAVADAVAKAATDIA
                     AQYGCEVRTIDAILKSADIDAVVICTPTDTHADLIEKFSNAGKAIFCEKPIDLSVKRV
                     EDCLKVVAANKTTLMVGFNRRFDPHFMAVRAAIDAGEIGTVEMVTIISRDPGAPPIDY
                     VKRSGGIFRDMTIHDFDMARFLLGEEIATVSAQASVLVDKAIGEAGDYDSVSVMLATA
                     TGKHATISNSRRATYGYDQRIEVHGSKGSVAAENQRAVSIEVATAKGYTRPPLHDFFM
                     TRYTEAYAKEIAAFVSAVEGKGKASPSGQDGLIA"
BASE COUNT          593 a         1112 c         1026 g          559 t
ORIGIN      
        1 cgaacgagat cagcgtgtgc tgcgccgtcc cggcgaattg cgtcgcatag aggaacgcgt
       61 ggagcccgcc cggcagcgta tattccgccc cggtttggcc ctgctccttg ctcggccgga
      121 agccgagcgc ctcggcatac cagcgtttgg cccgctcgat gtcctcggcg ggaatcatgg
      181 cagtcgtgga tttcggtgcg aacaaattat cctcctttgc ctgcgagccc gcggggacaa
      241 cgcctccgtg cccgatcggt tcggttcatt cctcggtcgg atagtgcagg tacatcgact
      301 gcaggccgac ccgccccggc ccggtaaagc ggttgacgat gaggttgccc gccgcgccga
      361 acagcccgct cgacagcttg tcgatcaccg tgtccatccg caccgtcggg tccttgtaga
      421 gccagccacc cggctcgatg tcgatctgct cgttcggccc cagcgtcttt tcgaacacgt
      481 tgccgtagcc gtgcacccag acgatgccgt cgccgctggc gcggaacttg tcgatgaaga
      541 acccggtcga ggagaacagc atgttggcga cgccccgcac gcgggcgaat gtgtattcga
      601 tgccgccggt cgccgcgagg aactggtgct cgcgcacgtc gatctcctgg ccggcccgca
      661 ggtggatcgg cgcgatgtgc ccggcgccgt cgcgcgaaaa ggcgatcatc ccgggcccgc
      721 tggcttccgt gacgaagatc tgcatccccg ccatcatgcg cttcagcgcg cccttcatcg
      781 gccgcagcgc taccttcacc tgcgggttct tccacagcag gatgtggtgc tcgaagaata
      841 ccgattgccg gctgacgtcg accgtcagca ccggcaccag ctcgccatcg agatgatagg
      901 tgacgccggc aaaggtttcg tcatgcgcct gcgtaggcag cagggtgggc agctcgttgg
      961 ccatggtgac gctcacggtt ggaagaagcg tctgacccta tacccgcgcc cggagtcgga
     1021 gaagtgaagg cccggctaac ccccgggtgg tgatttgcag tccgcagcta ctcagccggc
     1081 cgcgccacgc ccccggcgac gtcgagccgg tgcagctcgt cgcgatacgg cttggcggtg
     1141 ggtggcagct cacgccgcag gtaatagtcc tcgtagcgca attgccggag gaacgccggg
     1201 accatctcgc gatagccatc gaggatcgag cggttgggcg gcggcaggtc gtgcttgatc
     1261 agcgcatgca atcgcggcag cgcgtgatag gggatcatcg ggaacatgtg gtgctccaca
     1321 tggtagttca tgttccagta gatgaaccgg ctgatggggt tcatgtacac ggtgcggctg
     1381 ttgagccggt ggtcggtgac gttgtcggcg agcccgccat gctgcagcac gccgcacatc
     1441 accatgtgcc aggcgccgta gaggcgcggc gttcccacca tgacgatcgg tatccacgag
     1501 cgcgtcagca gcgccagcgc gatgaccgcg aggtagatga cgacccacac ccgcgcgacg
     1561 aagaacaccc gcggccgctc catcgctgga atgaagctct cctcgccggc attgagacgg
     1621 ccgaaactgt agcgcaccat gtcgctcagc gctgtccagg catcgacgac gccgatgaag
     1681 gcgagcagca cccgcagcag gtcgggcggc cgcatcacgg cgatttcggc gtcgcgtccg
     1741 acgatgatcg tgtcggcgtg gtgtcgcgcg tggctccagc gccagaccgt cgggttgcgc
     1801 atcaccatga agcaggcgat ctggtagatg gcccggttca tccacggcgt cttgaacgcc
     1861 gtgccgtgcc cgcactcgtg ccagcggctg tctgtcgacg atccatagag cacgccatag
     1921 gcgagccaga acggcacgca ccaccagctg ccccacagcc agatgccgcc ggccgccgtg
     1981 acgacgaacg ccagcaccca gagcgccgtg tcgcgcagcg ccggaccatc cgagcgctgc
     2041 atcagctcct tcatctgctg gcgcggcaca tcggtgtggt accactcggc cgccgcgaga
     2101 ccgttcgcca ccgcggccgc ggtatcgacg cccgtcaggc tgtagtcgcg cttgcccatc
     2161 cacttctcct cgcaatgcgg atttggcgac ctgcaagggc atatgtcgag tgtctttcag
     2221 ccgcaattat cggttcgttc actcccgatt tggaacagaa attctgcatt gacaatgaaa
     2281 ggggacccgt ccttcatttt tggcaatgtc acggcgaagc cgccttcacc tgaagcattc
     2341 cacaaccgag agatacatca tgaccattcg cttcgccctc ctcggcgccg gccgcatcgg
     2401 caaggtgcac gccaaggcga tcacttccaa tcccgcggcg aagctcgtcg ccgtcgccga
     2461 tgccgtcgcc aaggcagcca ccgacatcgc cgcccagtat ggctgcgagg tgcgcaccat
     2521 cgacgccatc ctgaagtccg ccgacatcga cgccgtggtg atctgcacgc ccaccgacac
     2581 ccatgccgac ctgatcgaga agttcagcaa cgccgggaag gcgatcttct gcgaaaagcc
     2641 gatcgacctg agcgtcaagc gcgttgagga ctgcctcaag gtcgtcgccg ccaacaagac
     2701 cacgctgatg gtcggcttca accgtcgctt cgacccgcac ttcatggcgg tacgcgcggc
     2761 gatcgacgcc ggcgaaatcg gcaccgtcga gatggtgacc atcatctcgc gcgatcccgg
     2821 cgccccgccg atcgactacg tcaagcgctc gggcggcatc tttcgcgaca tgaccatcca
     2881 tgatttcgac atggcgcggt tcctcctcgg cgaggaaatc gccaccgtct cggcccaggc
     2941 gagcgtgctc gtcgacaaag ccataggcga agccggcgac tacgacagcg tcagcgtcat
     3001 gctggccacc gcgaccggca agcacgcgac catctccaat tcccgccgcg ccacctatgg
     3061 ctacgaccag cggatcgagg tgcatggcag caagggctcg gtcgcggccg agaaccagcg
     3121 cgcggtgtcg atcgaggtcg cgacggccaa gggctacacc cggccaccgc tgcacgattt
     3181 cttcatgacc cgctacaccg aggcttacgc caaggagatt gccgccttcg tcagcgccgt
     3241 cgaaggcaag ggcaaggcat ccccgagcgg gcaggacggg ttgatcgcgc
//
LOCUS       DATAZA010000274         5190 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3394348, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000274 DATAZA010000000
VERSION     DATAZA010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5190
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3394348"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..357)
                     /locus_tag="VHZ56_06960"
     CDS             complement(<1..357)
                     /locus_tag="VHZ56_06960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003527444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX4297745.1"
                     /translation="MTAAEVIALLGLEPHPEGGWYRRTFADESPGGRAHSTLIYYLLE
                     AGDRSAWHRIDSAEVWHWYAGAPLELRLEASASILGNDLTAGQRPQGVVPPHGWQSAR
                     SLGDWTLVGCTVAPGFE"
     gene            complement(354..2243)
                     /locus_tag="VHZ56_06965"
     CDS             complement(354..2243)
                     /locus_tag="VHZ56_06965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEX4297746.1"
                     /translation="MLAITNLTYRIQGRPLFEGASVVLADGAKAGFVGKNGSGKTTLF
                     NLIQGQLSVDGGSIEINKRARIGAVAQEAPGNDLSVLETVMAADTERAALMAEAETAH
                     DAHRIADIHMRLADIDAHTAEARASTILKGLGFEQDRQLGPTSELSGGWRMRVALAGV
                     LFSQPDLLLLDEPTNYLDLEGTLWLEKYLATYPYTVFMISHDRDLLNKAVSSIVHLER
                     GKLTLYSGGYDTFEDTRRMQMELNNKAREKTLEQIAHMQAYVDRFRYKASKARQAQAR
                     LKMISKLKPPVALFDEYAAPFSFQNPKKIPAAPMITFDNVSTGYGEHVVLRHITNRIE
                     PDDRIALVGVNGNGKSTFAKLLAGDLRPMGGEMRRSKGLEIAYFAQHQMDKLKPEHTP
                     LEHVADLMPYDSEARRRSRVAQMGLTTSRMDTLVKNLSGGERARLLLGLITFAGPGML
                     ILDEPTNHLDIDSRDALVEALNEYTGAVLIISHDRHLIESTVDKLWIAQNGTIEEFDE
                     DIDSYQRLLTSGKERPGKGAASPAPVAAPVDKKAARQDAAARRLEVAPLRKSIKDAEQ
                     KLTRLRTELEKVEAILANPKTYDGAPERIVLLGKDKARFASDIAATEERWLSLSTQLE
                     EAERA"
     gene            2440..2862
                     /gene="ndk"
                     /locus_tag="VHZ56_06970"
     CDS             2440..2862
                     /gene="ndk"
                     /locus_tag="VHZ56_06970"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010661674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEX4297747.1"
                     /translation="MALERTFSIIKPDATRRNLTGKIIALIEGAGLRVVASKRILMTR
                     AQAEGFYAVHKARPFYGELVEQMSAGPVVVQVLEGENAIVKYREVMGATNPEKAAAGT
                     IRKEFAVSMGENSVHGSDAPETAAQEIGFFFSDIEIVG"
     gene            2913..3185
                     /locus_tag="VHZ56_06975"
     CDS             2913..3185
                     /locus_tag="VHZ56_06975"
                     /inference="COORDINATES: protein motif:HMM:TIGR00013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HEX4297748.1"
                     /translation="MPYVNVRISADGNTAAQKLRVIERITQVLVEELGKDPASTFVVI
                     DEVSTDNWGHYGTSVTQLRAAGAAAKPAAKPSARKPAARRTAPGKA"
     gene            3185..3370
                     /locus_tag="VHZ56_06980"
     CDS             3185..3370
                     /locus_tag="VHZ56_06980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008144861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HEX4297749.1"
                     /translation="MPEILVHLAAGRTAAQKKALMKDITDAVVKSLSVQPDRVVVQIV
                     ESPKDSKSRGGVPFSEL"
     gene            3471..3629
                     /locus_tag="VHZ56_06985"
     CDS             3471..3629
                     /locus_tag="VHZ56_06985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003496944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3563 domain-containing protein"
                     /protein_id="HEX4297750.1"
                     /translation="MGLMNTLRSRLRVRTRAQEENDYLNQATSSVDLEMRQREIDRGR
                     FRTFPHRA"
     gene            3807..3998
                     /locus_tag="VHZ56_06990"
     CDS             3807..3998
                     /locus_tag="VHZ56_06990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297751.1"
                     /translation="MPVRVPEVAAVLGFVLLLLIAKHLPVLSALPLTSITGIVCFAFA
                     IFLSLRLFQAELARIRAEE"
     gene            4124..4546
                     /locus_tag="VHZ56_06995"
     CDS             4124..4546
                     /locus_tag="VHZ56_06995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PqqD family protein"
                     /protein_id="HEX4297752.1"
                     /translation="MQPTDTFVPRSRDVASEEFDGEFVVLDLASGKYYGLSGGSAVVW
                     KGLMAGHSVTSLCAQLPDGDPRRGEVATLVGSLLDSGLLVVANGGAVAPPGLAVELAA
                     ASGPFAAEMFEDLADLLLTDPIHDVDQETGWPHRPTDD"
     gene            4552..>5190
                     /locus_tag="VHZ56_07000"
     CDS             4552..>5190
                     /locus_tag="VHZ56_07000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006325475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297753.1"
                     /translation="MSELLIDSGNAHEFGRALLDYAGSIAVESATFSLPGFRLAVSSD
                     SAGYLDLCRRALVDDPRFAPGQQPLAVSVLDYLTHPDMPHSRWIGEMFGAPLVTEGLA
                     HGGFEGLFDLERRLWQVYDPVARKGIEALAAPGQFAPWVASFPLRNFLHWACQAAGRR
                     IIHAGTLGLGGNGVMLIGAGGAGKSGTTLSGILAGLDSVGDDYVAMSLDDAGI"
BASE COUNT          775 a         1810 c         1683 g          922 t
ORIGIN      
        1 ctcgaatccc ggcgccaccg tgcagcccac cagggtccag tcgccaaggc tgcgcgccga
       61 ctgccagccg tgcggcggca ccacgccctg cggccgctgc cccgccgtga ggtcattgcc
      121 gaggatgctc gccgatgcct caaggcgcag ctccagcggc gcgccggcgt accagtgcca
      181 cacttcggcg ctatcgatcc ggtgccacgc cgagcggtca ccggcctcga gcaggtagta
      241 gatcagcgtc gaatgcgccc ggccgcccgg ggactcgtcg gcaaaggttc gtcggtacca
      301 gccgccttcg gggtgcggtt cgaggccgag cagggcgatc acctcggcgg cggtcatgcg
      361 cgctcggcct cctccagctg cgtcgagagc gacagccagc gctcctcggt tgcggcgatg
      421 tccgaggcga accgcgcctt gtccttgccc agcagcacga tccgttccgg cgccccatcg
      481 taggtcttgg gattggcgag gatcgcctcg accttctcga gttcggtgcg cagccgcgtc
      541 agcttctgct cggcgtcctt gatcgacttg cgcagcggcg ccacctcgag ccgccgcgcc
      601 gccgcgtcct gtcgcgccgc cttcttgtcg accggcgcgg cgaccggggc aggggacgcc
      661 gcgcccttgc cgggccgctc cttgccgctc gtcagcaggc gctggtagct gtcgatgtct
      721 tcgtcgaact cctcgatcgt gccgttctgg gcgatccaca gcttgtcgac cgtggactcg
      781 atcaggtgcc ggtcgtggct gatgatcagc accgccccgg tgtattcgtt gagcgcctcg
      841 accagcgcat cgcggctgtc gatgtcgagg tggttggtcg gctcgtcgag gatcagcatc
      901 cccggcccgg caaaggtgat gagcccgagc agcagccgcg cccgctcgcc gccgctcagg
      961 ttcttgacca gcgtatccat gcgcgaggtg gtgagcccca tctgcgccac gcggctgcgg
     1021 cgccgcgcct cgctgtcgta cggcatcagg tcggcgacgt gctcgagcgg cgtgtgctcg
     1081 ggcttcagct tgtccatctg gtgctgggcg aaataggcga tctccagccc cttgctgcgc
     1141 cgcatctcgc cgcccatcgg ccgaaggtcg ccggccagca gcttggcgaa cgtcgacttg
     1201 ccgttgccgt tgacgccaac cagcgcgatc cggtcgtccg gctcgatgcg gttggtgatg
     1261 tgccgcagca ccacgtgctc gccatagccg gtcgacacat tgtcgaaagt gatcatcggc
     1321 gcggccggga tcttcttggg gttctggaac gagaacggcg ccgcgtactc gtcgaacagc
     1381 gccaccggcg gcttcagctt cgagatcatc ttgagccgcg cctgcgcctg ccgcgccttg
     1441 ctcgccttgt agcggaagcg atcgacatag gcctgcatgt gcgcgatctg ctccagcgtc
     1501 ttctcgcgcg ccttgttgtt gagctccatc tgcatgcggc gggtgtcttc gaaggtgtcg
     1561 tagccgcccg agtagagcgt cagtttaccg cgctccagat gcacgatcga gctcaccgcc
     1621 ttgttgagga ggtcgcggtc gtggctgatc atgaacacgg tatagggata ggtcgcgaga
     1681 tacttctcga gccacagcgt gccctcgaga tcgaggtagt tggtgggctc gtcgagcagc
     1741 agcaggtcgg gctggctgaa caacacccct gccagcgcca cgcgcatccg ccagccgccc
     1801 gacaattcgc tcgtcggccc cagctgccgg tcctgctcga accccaggcc cttgaggatg
     1861 gtcgatgccc gcgcctcggc cgtgtgggcg tcgatgtcgg cgagccgcat gtggatatcg
     1921 gcgatccggt gcgcgtcgtg cgccgtctcc gcctcggcca ttagcgccgc gcgctcggtg
     1981 tcggccgcca tcaccgtctc gagcacgctg aggtcgttgc ccggcgcctc ttgcgccacc
     2041 gccccgatcc gcgcccgctt gttgatctcg atcgagccgc cgtcgaccga cagctggccc
     2101 tggatcaggt tgaacagcgt cgtcttgccg ctgccgttct tgcccacgaa cccggctttc
     2161 gccccatccg ccagcaccac ggacgccccc tcgaacagcg gacggccctg gatgcgatag
     2221 gtgagattgg tgatggcgag catggcgggc tgcatatagc ggcgaagcag gggaagtcca
     2281 accggcctct gtatccggtc gcgatcgagg cctgcggtcg gtcatccgcg tcgccgctgc
     2341 agcatcggcg cgctgctggc ccggctgcat ccggcttgcc tccgtcaccc ccctcggcta
     2401 aaagccccca ccttttccgc cagtttcagg gacttccaca tggctctcga gcgcaccttc
     2461 tcgatcatca agcccgacgc gacccgccgc aatctcaccg gcaagatcat cgccctgatc
     2521 gagggcgccg gcctgcgcgt cgtcgccagc aagcgaatcc tgatgacccg cgcccaggcc
     2581 gaggggttct acgccgtgca caaggcgcgg ccgttttacg gcgagctggt cgagcagatg
     2641 agcgccggcc cggtggtcgt gcaggtgctt gagggcgaaa acgccatcgt caagtaccgc
     2701 gaggtcatgg gcgcgaccaa tcccgagaag gccgccgccg gcaccatccg caaggaattc
     2761 gccgtcagca tgggcgagaa ttccgtgcac ggctccgatg cccccgagac ggccgcgcag
     2821 gagatcgggt tcttcttctc cgacatcgag atcgtcggct agttcttgca ggcgggagcg
     2881 agcccggcgt cagcatttcg aggggagcgc ccatgcctta cgtcaatgtc cgcatcagtg
     2941 ccgacggcaa taccgcggct cagaaactgc gggtaatcga acgcatcacc caggtgctgg
     3001 tcgaggaact gggcaaggac ccggccagca cattcgtcgt catcgacgag gtgtcgacag
     3061 acaattgggg ccattacggc acgtccgtta cccagctgcg cgcggcaggg gccgcggcca
     3121 agcccgccgc aaagccgtcg gcccgcaagc ctgccgcaag gcggacggca ccgggcaagg
     3181 cctgatgccc gaaatcctcg tccacctcgc cgccggccgg accgcagcgc agaagaaggc
     3241 cctgatgaag gacattactg acgcggtggt gaagagcctt tcggtgcagc ccgaccgcgt
     3301 cgtcgtccag atcgtcgaat cgcccaagga cagcaagtcc cgcggcggcg tccccttctc
     3361 cgagctctag gggcagggca acccgcctgg cgggacgcag ccatgcacgc cggccggttg
     3421 ccgacgcagc gcgccacgcc cagatttcga gcgtcaaaag gagaaccgcc atgggactca
     3481 tgaacacgct gagatcgagg ctccgggtgc gcacgcgcgc ccaggaagag aacgactatc
     3541 tcaaccaggc gacgtcgtcg gttgacctgg aaatgcggca gcgggaaatc gaccgtgggc
     3601 gcttccgcac ctttccgcac cgcgcctgaa cacgcctttt gttgcggggc ggccacggcc
     3661 ccgcggcatt tcttcccagc ctgcgaaaat tcatggaacc ttctgcgctt tcgcgtaagc
     3721 ctaggcgcag gcgggtaatt tgcccgtccg ataacccatc tcgcattggc ggagcgtcgg
     3781 ccgtgcggtt tgttggaagg caaaccatgc ccgttcgcgt gcccgaagtc gccgccgtcc
     3841 tcggcttcgt cctcctcctg ctgatcgcca agcatcttcc ggtcctttcg gctttgccgc
     3901 tgaccagcat caccggaatc gtctgcttcg ccttcgccat cttcctctcg ctgcgcctgt
     3961 tccaggccga gctggcgcgg atccgcgccg aggaatagcc gccccattcc gcctgtgaaa
     4021 agccgcattt tcggttgaat cgaacgtccg gtccgtgctt gaacccgcgg acattgggca
     4081 acggcggctg gatgatgggt cgtcgcgagc gaggggattc cagatgcagc cgacggatac
     4141 gttcgtgccg cggagccgtg acgtggcgtc cgaggagttc gacggcgagt tcgtcgtgct
     4201 cgatctggcc agcggcaagt attacggcct ttcgggcggc tctgccgtcg tctggaaggg
     4261 cctgatggcc ggccattccg tgaccagtct ttgcgcgcaa ctgccggacg gcgatccgcg
     4321 ccgcggcgaa gtggcgacgc tcgtcggcag cctgctcgac agcggcctgc tggtcgtcgc
     4381 caatggcggc gccgtcgcgc ctcccggcct tgcggtcgaa cttgccgccg cgagcggccc
     4441 gtttgccgct gagatgttcg aggatcttgc agacctgctg ctcaccgatc cgatccacga
     4501 cgtcgatcag gagaccggct ggccgcatcg ccccacggac gactgacggc attgtcggaa
     4561 ttgctcatcg acagcggcaa cgcgcacgag ttcgggcgcg ccctgctcga ctacgctggc
     4621 tccatcgcgg tcgagagcgc gacgttcagc ctgccgggct tccgcctcgc ggtgtcctcc
     4681 gattccgccg gctatctcga tctctgccgt cgcgccctcg tcgacgatcc gcgctttgca
     4741 ccggggcagc agccgctcgc cgtcagtgtc ctcgactacc tgacgcaccc cgacatgccg
     4801 cacagtcgct ggatcggcga gatgttcggt gcgccgctcg tcaccgaggg cctcgcgcat
     4861 ggcgggttcg agggcctgtt cgacctcgaa cgccggctct ggcaggtcta tgatccggtt
     4921 gctcgcaagg gcatcgaagc gctggccgcg cccggccagt tcgcgccctg ggtcgcgtcg
     4981 ttcccgttgc gcaacttcct ccactgggcc tgtcaggccg ccggccggcg catcattcac
     5041 gccggcacgc tcgggctcgg cggcaacggc gtcatgctga tcggggcagg gggcgccggc
     5101 aagtccggca cgacgctttc gggcattctc gccggtctcg acagcgtcgg cgacgactat
     5161 gtcgcgatga gcctcgacga cgccggaatc
//
LOCUS       DATAZA010000275         2093 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1653446, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000275 DATAZA010000000
VERSION     DATAZA010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1653446"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..193
                     /locus_tag="VHZ56_07005"
     CDS             <1..193
                     /locus_tag="VHZ56_07005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297754.1"
                     /translation="GLRLFGPADAPVAMVRGRHRVRLLAQSPRDFDLSGYVRFWLTSA
                     EQPRGNLRVQVDIDPMSFY"
     gene            complement(194..565)
                     /locus_tag="VHZ56_07010"
     CDS             complement(194..565)
                     /locus_tag="VHZ56_07010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012590079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX4297755.1"
                     /translation="MGAQFIKSPSGEDMVVLPRSEYEALIEAAEDAAEDAADVAAYDA
                     AMVAGTEPLPFEISQALLKGDSRLKAIRLWRSETQARLAFRTGTSQGLISDLENRRRD
                     MTDEMAGRLGQALDVPPSWLS"
     gene            complement(570..815)
                     /locus_tag="VHZ56_07015"
     CDS             complement(570..815)
                     /locus_tag="VHZ56_07015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020178857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid stabilization protein"
                     /protein_id="HEX4297756.1"
                     /translation="MKTIIFTSAAARQLDALPDAVRDQLLSDLDRYAMTGQGDVKRLS
                     GRDAYRLRSGRYRVLFDEDRTTVLAVYVGKRETTTYR"
     gene            1054..1614
                     /locus_tag="VHZ56_07020"
     CDS             1054..1614
                     /locus_tag="VHZ56_07020"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007876824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEX4297757.1"
                     /translation="MAEQSSVLTQIARPYAAALFDLSTAEGSLAAVESGLADIQKLST
                     ESADFRRFLRSPVISSREKSAAIEPILGKAGSNATVANFVKVVARNGRLFALPAIIKA
                     FQALAARGRGEVTADVTSAAPLSAAQRDALANTLKQKLGKTVTLTEHVDPSLIGGLQV
                     KVGSQMIDSSLKTKLTAMKIAMKEVG"
     gene            1614..>2093
                     /locus_tag="VHZ56_07025"
     CDS             1614..>2093
                     /locus_tag="VHZ56_07025"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597667.1"
                     /note="produces ATP from ADP in the presence of a proton
                     gradient across the membrane; the alpha chain is a
                     catalytic subunit; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEX4297758.1"
                     /translation="MDIKAAEISAILKEQIKNFGQEAEVSEVGQVLSVGDGIARVYGL
                     DNVQAGELVEFPGGIKGMALNLETDNVGVVIFGADRGIKEGDTVKRTGSIVDTPVGKG
                     LLGRVVDALGNPIDGKGPIQSTERRRVDVKAPGILPRKSVHEPMSTGLKAIDALIPIG
                     "
BASE COUNT          367 a          700 c          678 g          348 t
ORIGIN      
        1 cggcctcagg ctgttcggtc ccgccgacgc gcccgtggcg atggtgcgcg gccgccaccg
       61 ggtgcggctg ctggcgcaga gcccgcgcga cttcgacctc tcgggctatg tgcggttctg
      121 gctgacctcg gccgaacagc cgcgcggcaa tctgcgggtg caggtcgata tcgacccgat
      181 gagcttttac tagctagctc aaccaggacg gcggcacgtc gagcgcttgt cccagccgcc
      241 ctgccatttc gtcagtcatg tcgcgccgtc gattttccag gtcggaaatc aagccctgcg
      301 aggtgccggt tcggaacgcc aggcgagctt gggtttcact gcgccacaga cggatggcct
      361 tgagccggct gtcgcccttg agcagggcct gtgaaatctc aaagggcagt ggttcagtcc
      421 cggcaaccat ggccgcatcg taggccgcga catcggcagc atcctccgcg gcgtcctcgg
      481 cagcctcaat gagcgcctca tattcgctgc gcggcagaac caccatgtcc tcgccgctcg
      541 ggctcttgat gaactgggca cccatctggt cacctgtaag tggttgtctc acgtttgccg
      601 acatacacgg caagcaccgt cgtccgatct tcgtcgaaca gcacgcgata cctgccgctg
      661 cggaggcgat aggcatcgcg accgctcagc cttttcacgt caccctggcc ggtcatggca
      721 tagcggtcca ggtcgctcag cagctggtct cgcaccgcat cgggcagggc atcgagttgg
      781 cgtgccgcag ccgaggtgaa gatgatcgtc ttcatcgcat aattatcgca tcgatatcgc
      841 gggcgtcaat cctgccgcca aaagtcttcc ggcgcctgcg acaatcgtcc ccgaaaaacc
      901 cctcccgccg cgccttgcgg actctcgcgc ggccatgtta gagggggcgc ggtttcgggg
      961 gctggtgggc cgcccccggg tcatcacgag cgtcggcaat cgcccgcttt cgcgcgggtc
     1021 tggacgccac cagcgacacg ggtgggagcg gcattggcag agcagagttc ggtgctgacc
     1081 cagatcgcgc ggccgtatgc ggcggcgctg ttcgatttga gcacggccga aggctcgctg
     1141 gcggcggtcg aatcggggct cgccgacatt cagaagctca gcaccgagag cgccgatttc
     1201 cgccggttcc tgcgttcgcc ggtgatcagc agccgggaaa agtcggcggc gatcgagccg
     1261 atcctgggca aggccggcag caacgccacc gtcgccaatt tcgtcaaggt cgtcgcccgc
     1321 aacggccggc tgttcgcgct gccggcgatc atcaaggcgt tccaggccct ggccgcccgg
     1381 ggccgcggcg aagtgacggc cgacgtcacc tccgcggcgc cgctctcggc ggcgcagcgc
     1441 gacgcgctgg ccaatacgct caagcagaag ctgggcaaga ccgtcaccct caccgaacac
     1501 gtcgatccca gcctgatcgg aggcctgcag gtcaaggtcg gctcgcagat gatcgacagc
     1561 tccctcaaaa ccaagctgac ggcgatgaag atcgccatga aagaggtcgg ataatggaca
     1621 tcaaagccgc ggaaatctct gcgatcctca aggagcagat caagaatttc ggccaggaag
     1681 ccgaagtctc cgaagtcggc caggtgctca gcgtcggcga cggcatcgcc cgcgtctacg
     1741 gcctcgacaa tgtgcaggcc ggcgaactcg tcgagttccc gggcggcatc aagggcatgg
     1801 cgctcaacct cgagaccgac aatgtcggcg tggtgatctt cggtgccgac cgcggcatca
     1861 aggaaggcga caccgtcaag cgtaccggct cgatcgtcga taccccggtg ggcaagggcc
     1921 tgctcggccg cgtcgtcgat gcgctgggca acccgatcga cggcaagggc ccgatccagt
     1981 ccaccgagcg ccgccgcgtc gacgtcaagg cgccgggcat cctgccgcgc aaatcggtgc
     2041 acgagccgat gtcgaccggg ctcaaggcga tcgacgcgct gatcccgatc ggc
//
LOCUS       DATAZA010000276         3814 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3394621, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000276 DATAZA010000000
VERSION     DATAZA010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3814
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3394621"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..662)
                     /locus_tag="VHZ56_07030"
     CDS             complement(<1..662)
                     /locus_tag="VHZ56_07030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019995978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HEX4297759.1"
                     /translation="MADYSVKDISLADYGRKEIGMAEIEMPGLMAIREEYAGAQPLKG
                     ARIAGSLHMTIQTAVLIETLQALGAEVRWVSCNIFSTQDHAAAAIAKAGVAVFAHKGE
                     TLQEYWDFTDRMMDWPGGLTPNMILDDGGDATMLVLTGAKAEKDPSVLAKPGNEEEEI
                     FFATIRKRLAKDPNFFSKIRAAIRGVSEETTTGVMRLYQLHEKGELPFPAINVNDSVT
                     KS"
     gene            complement(752..1375)
                     /locus_tag="VHZ56_07035"
     CDS             complement(752..1375)
                     /locus_tag="VHZ56_07035"
                     /inference="COORDINATES: protein motif:HMM:NF022605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2937 family protein"
                     /protein_id="HEX4297760.1"
                     /translation="MRRTLAVLGGLALAVGFSQFPEYAQQYEQRLGGAVDELATITAD
                     FDTDAQKFGLTREQALQRYATSPDSFLVGRGTSMQRTLTRYGALSADLADLRGAGPLQ
                     RLVHLNDYFDSDVGARALADYKPAVPVTAEGFTWALAGFGAGYLLVGALLAFLSLPFR
                     WRNGHLPHRRAQLWKRREAVLVEAVVVEEKATPVLPRPRPPAEQRYG"
     gene            complement(1451..1768)
                     /locus_tag="VHZ56_07040"
     CDS             complement(1451..1768)
                     /locus_tag="VHZ56_07040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HEX4297761.1"
                     /translation="MDAAANAGRALAQQMTIVNRKGLHARASARFVRMAECYEAEIKV
                     TRDGATVNGNSIMGLMMLGAGPGSTILVQATGKQAREALDAISTLVESGFDEDSEGVG
                     AAG"
     gene            complement(1807..2205)
                     /locus_tag="VHZ56_07045"
     CDS             complement(1807..2205)
                     /locus_tag="VHZ56_07045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009466646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEX4297762.1"
                     /translation="MIGLVLVTHGALAVEFKSAVEHVVGPQEQIETVCIGPDDDMEAR
                     REDIIAAVGAANSGDGVVILTDMFGGTPSNLAISVMKTVGAEVIAGVNLPMLVKLARV
                     RGDLEIKAAVTMAAEAGRKYINVASESLGG"
     gene            complement(2312..2791)
                     /locus_tag="VHZ56_07050"
     CDS             complement(2312..2791)
                     /locus_tag="VHZ56_07050"
                     /inference="COORDINATES: protein motif:HMM:NF019118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297763.1"
                     /translation="MSRTNIHATGLVLGDTGLILRGPSGAGKSLLALELIDSWEGQGL
                     GAKLVSDDRIDIEASGGQLTMHAPEAIAGLIELRGRGIVRRPHVGMAPLHLVVDLVET
                     LERMVEEDALLTTLEGVTVARCPVPRAGKVDSRHQLLLIREALRALSPVPRVRKKTA"
     gene            complement(2788..>3814)
                     /locus_tag="VHZ56_07055"
     CDS             complement(2788..>3814)
                     /locus_tag="VHZ56_07055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX4297764.1"
                     /translation="VQRLRATVGVLLLSTQPGEIDSIVAADRWGVLRIALVAATVTIV
                     LSLLLAGTIAGPLRRLSEAAEKVQTSITSRQEIPDFTYRTDEVGHLSRALRSMTSSLY
                     NRIEAIERFAADVAHELKNPLTSLRSAVETLPRARREEDRERLNAIIQHDVRRLDRLI
                     SDISNASRLDAELARESSEPVDFEKLCETMVAMQGDLAAPRQVRVVLEGRQGKLPATT
                     LGHDSRLAQVINNLIDNAVSFSPPGGTVSVAIRTEDDRIITTVSDEGPGIRGDISRIF
                     QRFYTDRPDGEHFGDHSGLGLAISKQIIDAHRGTIAAANRTDRSGAIFTVTLPRATIE
                     KPARPRK"
BASE COUNT          553 a         1377 c         1231 g          653 t
ORIGIN      
        1 ttcgacttgg tgacgctgtc gttgacgttg atcgccggga acggcagctc gcccttctcg
       61 tgcagctggt agagccgcat cacgccggtc gtcgtctctt cggagacgcc gcggatggcg
      121 gcgcggatct tcgagaagaa gttcgggtcc ttggcgagcc gcttcctgat cgtcgcaaag
      181 aagatttcct cttcttcgtt gccgggcttg gccagcaccg agggatcctt ctcggccttg
      241 gcgccggtga ggacgagcat cgtggcgtcg ccgccgtcgt cgaggatcat gttgggggtc
      301 agcccgcccg gccagtccat catccggtcg gtgaagtccc agtattcctg cagcgtctcg
      361 cccttgtgcg cgaacaccgc gacgccggcc ttggcgatcg ccgcggccgc gtgatcctgc
      421 gtcgaaaaga tgttgcagct cacccagcgc acttcggcgc cgagcgcctg cagcgtctcg
      481 atcagcaccg ccgtctggat cgtcatgtgc agcgagccgg cgatgcgcgc gcccttcagc
      541 ggctgcgccc cggcatattc ctcgcggatc gccatcaggc ccggcatctc gatttcggcc
      601 atgccgattt ccttgcggcc atagtcggcg agcgaaatgt ctttgacgga ataatcggcc
      661 attgcaggtc tccggaaacg agggttggcg ccttatagag gcgccgcccg ctgccggcaa
      721 caggacataa agaaagcttt atgtcccgcc ttcagccata gcgctgctcg gccggcggcc
      781 gcgggcgcgg cagcaccggt gtcgcctttt cctcgaccac tacggcttcg accagcaccg
      841 cctcgcgccg cttccacagc tgcgccctgc ggtgcggcag atgcccgttg cgccagcgga
      901 agggcaggct gaggaaggcg agcagcgccc ccacgaggag gtagccggcc ccgaacccgg
      961 ccagcgccca cgtgaagccc tcggcggtca ccggcactgc cggcttgtag tcggcgagag
     1021 cccgggcgcc gacgtcgctg tcgaaatagt cgttgaggtg gacgagccgt tgcagcggac
     1081 ccgcaccccg gaggtcggcg aggtcggcgc tgagcgcgcc gtagcgcgtc agcgtgcgct
     1141 gcatgctggt cccgcgcccg acgaggaagc tgtcgggcga cgtcgcgtag cgctgcagcg
     1201 cctgctcgcg cgtcagcccg aacttctgtg cgtcggtgtc gaaatcggcg gtgatcgtcg
     1261 ccagctcgtc caccgcgccg cccagccgct gctcgtattg ctgcgcatat tccggaaatt
     1321 gcgaaaagcc gacagccagc gccagcccac ccagtaccgc cagcgtcctg cgcatcgagg
     1381 catcctccgg cccgaaagat gggagcgttc cgcgcctttg caacggccgg acggcggcgg
     1441 ccgttcccgt tcagccggcg gcgccgacgc cctcgctgtc ctcgtcgaag ccgctttcga
     1501 ccagcgtcga gatcgcgtcc agcgcctcgc gcgcctgctt gccggtggcc tgtaccagga
     1561 tcgtcgagcc tggcccggcg cccagcatca tcagtcccat gatcgagttg ccgttgaccg
     1621 tcgcgccgtc gcgcgtgacc ttgatctcgg cctcgtagca ttccgccatc cgcacgaacc
     1681 gcgccgaagc ccgggcgtgc aggcccttgc ggttgacgat ggtcatctgc tgcgccagcg
     1741 cccggccggc attcgctgcg gcatccatgc cggtaaatgt aggccgggaa acgttaaccg
     1801 ccaagctcag ccgccaagcg actcgctggc gacgttgatg tatttgcggc cggcttccgc
     1861 cgccatcgtc accgccgcct tgatctcgag gtcgccgcgc acccgcgcca gcttgaccag
     1921 catcggcagg ttgaccccgg cgatcacttc cgcccccacc gtcttcatca ccgagatggc
     1981 gaggttcgag ggcgtgccgc cgaacatgtc ggtgaggatc accacgccgt cgccgctgtt
     2041 ggccgccccg accgccgcga tgatgtcctc gcggcgcgcc tccatgtcgt cgtcgggtcc
     2101 gatgcagacc gtttcgatct gctcctgcgg cccgaccacg tgttcgacgg cggatttgaa
     2161 ttcgacggcg agcgcaccgt gcgtcaccag gaccagtccg atcatgcact atccccagac
     2221 gggcctgccc ccaggcgacg ccttcgctgt ccaccgtccg acgctcggcc cgacgccaag
     2281 gcgccgagtt ttgtcctctg actccggggt ttcaagcggt ttttttccgg acccgtggca
     2341 ccgggctaag tgcccgcagc gcctcgcgga tcagcagcag ctggtggcgg ctgtcgactt
     2401 ttccggcgcg cggcaccgga caccgggcga cagtcacccc ctcgagcgtg gtgagcagcg
     2461 cgtcttcctc caccatgcgc tccagcgtct ccaccagatc gaccaccagg tgcagcggcg
     2521 ccatgccgac atgcggccgc ctgacgatgc cccggccccg cagttcgatc agcccggcga
     2581 tcgcctcggg agcatgcatg gtcagttggc cgccacttgc ctcgatatcg atgcgatcgt
     2641 ccgaaacgag cttggcgccc agcccctggc cctcccacga atcgatcagt tcgagcgcca
     2701 gcagcgactt gcccgccccc gaggggccgc gcaggatcag cccggtatcg cccagcacca
     2761 gcccggtggc gtggatgttg gtgcggctca cttgcgtggc cgcgccggct tttcgatcgt
     2821 cgcccgcggc agcgtgacgg tgaatatcgc gcccgagcgg tcggtgcggt tggcggcggc
     2881 gatggtgccg cggtgcgcgt cgatgatctg cttcgagatc gccagcccga ggccgctgtg
     2941 gtcgccgaaa tgctcgccgt ccggccggtc ggtatagaag cgctggaaga tgcgcgagat
     3001 gtcgccgcga atgcccgggc cctcgtcgct gaccgtcgtg atgatgcggt cgtcctcggt
     3061 gcggatcgcc acgctcaccg tgccgcccgg cggcgaaaac gacaccgcgt tgtcgatgag
     3121 gttattgatc acctgcgcca gccggctgtc gtggccgagc gtcgtcgccg gcagcttgcc
     3181 ctgccgcccc tcgagcacca cccgcacctg ccgcggggcc gcgaggtccc cctgcatggc
     3241 gaccatcgtc tcgcacagct tttcgaaatc caccggctcc gaactctcgc gcgccagttc
     3301 agcgtcgagg cggctggcgt tggaaatgtc ggagatcagc cggtcgagcc ggcgcacatc
     3361 gtgctggatg atggcgttga gccgctcgcg gtcttcctcg cgccgcgccc gcggcagcgt
     3421 ctccaccgcc gagcgcagcg acgtcagcgg attcttcagc tcatgcgcca cgtcggcggc
     3481 gaaccgctcg atcgcctcga tgcggttgta gagcgagctg gtcatcgagc gcagcgcccg
     3541 gctcagatgc cccacctcgt ccgtccggta ggtgaaatcg gggatctcct gccggctggt
     3601 gatcgaggtc tgcaccttct cggccgcctc cgacagccgc cgcagcggcc cggcgatggt
     3661 gcccgcgagc agcagcgaca gcacgatcgt caccgtcgcc gccaccaacg cgatgcgcag
     3721 cacgccccag cggtccgccg cgacgatcga atcgatctcg cccggctgcg tcgacagcag
     3781 cagcaccccc accgtggcgc gcagccgctg cacc
//
LOCUS       DATAZA010000277         3051 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4091058, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000277 DATAZA010000000
VERSION     DATAZA010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3051
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4091058"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1038
                     /locus_tag="VHZ56_07060"
     CDS             <1..1038
                     /locus_tag="VHZ56_07060"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4297765.1"
                     /translation="RVFEVIEGHCTGRGMALLLVTHDLKAAARLCDRIAVLKDGRMVE
                     AGDKLEVLGHPRHDYTRALAAAGRHRARTLMRTPIGGTLLDVRAVSRRYRQPDVSLFE
                     PRPPVMALDGVSLAMRGGESVALVGPAGAGKSTLGRIVAGLERATAGELQFDGLVYHG
                     TDLPWRIRRDITLVSADPAHAFDPRLSVGESVAEPMRLETQRPLGELSARLVEMVSAV
                     GLSPDLLGRLPAEFSPGDLQRLAIARALTTRPRLIVLDEPVRRLDIAARGEIVVLLNR
                     LRADFGLSFLLISHDLEVVRIVADRVLVMDRGRIVETGAPAQLFDKPQQPLTRQLVAA
                     QLPDVGIVPVF"
     gene            complement(1050..2705)
                     /locus_tag="VHZ56_07065"
     CDS             complement(1050..2705)
                     /locus_tag="VHZ56_07065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase family protein"
                     /protein_id="HEX4297766.1"
                     /translation="MTEQKPAVDTPVDRDWWRGAVIYQIYPRSFQDHNGDGVGDLVGI
                     TERLEYVADLGVDAIWLSPFFTSPMKDFGYDVSNYRDVDPIFGTLGDFDRLLEKAHAL
                     KLKVIIDQVISHCSDKHPWFAESRLNRTNDKADWFVWADPKPDGTPPNNWLSIFGGSA
                     WTWDSRRMQYYMHNFLASQPDLNFHHPAVQDGMLNNMRFWLERGVDGFRLDTVNFYFH
                     SLGLQSNPVVRPEDFNATTAPAVNPYNFQEHLYDKSQPENLKFLQRLRSLTDEFGAKM
                     TVGEIGDSQHQMELMAAYTSGNDKLSMAYTFDYLGGEFSAAHFRKAIEITEAEAPEGW
                     ICLAFSNHDVVRHISRWATHGQQDAFTRLACSLLLSMRGSVCLYEGEELGLTEAELAF
                     EDLVDPYGIEFWPQFKGRDGCRTPMVWQSTSHLGGFTTAARSWLPVPADHMLKAVDKQ
                     VDDPASVLSHYRAMLAFRHQHPALARGSIAVLDAPDGVLSFVRDGHGERLYCAFNMSE
                     KAAVVSVPSGFQLSPSGAPGVAAEPTGEALSLAPFGAYIGILR"
     gene            complement(2956..3039)
                     /locus_tag="VHZ56_07070"
     CDS             complement(2956..3039)
                     /locus_tag="VHZ56_07070"
                     /inference="COORDINATES: protein motif:HMM:NF012457.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297767.1"
                     /translation="MHVDYATQQRTPKQSYRAFQGMLHNTR"
BASE COUNT          472 a          990 c         1091 g          498 t
ORIGIN      
        1 cgtgtcttcg aggtcatcga gggccactgc acgggtcgcg gcatggcgct gctgctcgtc
       61 acccacgatc tcaaggccgc ggcacggctc tgcgaccgca tcgcggtgct gaaggacggc
      121 cgcatggtcg aggccggcga caagctcgag gtgctcggcc atccgcggca cgactacacg
      181 cgcgcgctgg ccgccgcggg gcggcaccgg gcacgcacgc tgatgcggac gccgatcggc
      241 ggcacgctgc tcgacgtccg cgccgtcagc cgccgctacc ggcagcccga cgtatcactg
      301 ttcgagccgc ggccgccggt gatggcgctc gacggggtga gcctcgcgat gcggggcggc
      361 gagtcggtgg cgctggtcgg acccgccggc gccggcaagt cgacgctggg ccggatcgtc
      421 gccgggctgg agcgggccac ggccggtgaa ctccaattcg acggcctcgt ctatcacggc
      481 accgacctgc cgtggcggat ccggcgcgac atcaccctgg tgtccgccga cccggcgcac
      541 gccttcgatc cgcgcctcag cgtcggcgag tcggtggccg aaccgatgcg gctcgagacg
      601 cagcgtccgc tcggcgaact gagcgcgcgg ctggtcgaga tggtgagcgc cgtcgggctg
      661 tcgccggacc tgctgggccg gctgccggcg gaattttcgc ccggcgacct gcagcggctg
      721 gcgatcgccc gggcgctgac aacgcggccg cgcctgatcg tgctcgacga gccggtgcgg
      781 cggctcgaca ttgcggcgcg cggcgaaatc gtcgtgctgc tgaaccggct gcgggcggat
      841 ttcgggctga gcttcctgct gatcagccat gatctcgagg tggtgcggat cgtcgccgac
      901 cgggtgctgg tgatggaccg cggccggatc gtcgagaccg gcgcgccggc gcagctgttc
      961 gacaagccgc agcagccgct cacccggcag ctggtggcgg cgcaactgcc cgatgttggc
     1021 atcgtaccgg tgttctagcg ccggcgcggc tagcgcagga tgccgatata ggcgccgaac
     1081 ggcgcgaggc tcagcgcctc ccccgttggc tcggcggcca cacccggcgc gcccgaggga
     1141 ctgagctgga agcccgaggg caccgagacc accgccgcct tctcgctcat gttgaaggcg
     1201 cagtagagcc tttcgccatg gccgtcgcgc acgaagctca gcacgccgtc cggcgcgtcg
     1261 aggacggcga tggagccgcg ggcgagcgcc gggtgctggt gccggaacgc cagcatggcg
     1321 cgataatgcg agagcaccga ggcggggtcg tcgacctgct tgtcgacggc cttgagcatg
     1381 tggtcggccg gcaccggcag ccacgagcgg gcggcggtgg tgaagccgcc caggtgcgag
     1441 gtcgattgcc agaccatcgg cgtgcggcag ccgtcgcggc ccttgaactg tggccagaac
     1501 tcgattccat aaggatcgac cagatcctcg aaggccagct ccgcctcggt gagccccagt
     1561 tcctcgccct cgtacaggca gaccgagccg cgcatcgaca gtagcagcga gcaggccagc
     1621 cgggtgaagg cgtcctgctg gccatgcgtc gcccagcggc tgatgtggcg aaccacgtcg
     1681 tgattggaga acgccaggca gatccagcct tcgggggcct cggcctcggt gatctcgatc
     1741 gccttgcgga aatgcgcggc gctgaactcg ccgccgagat aatcgaaggt ataggccatg
     1801 ctcagcttgt cgttgcccga ggtgtaggcg gccatcagtt ccatctggtg ctggctgtcg
     1861 ccgatctcgc cgacggtcat cttggcgccg aactcgtcgg tgagcgagcg caggcgctgc
     1921 aggaacttca aattctccgg ctggctcttg tcgtagaggt gttcctggaa attgtagggg
     1981 ttcaccgccg gcgcggtggt ggcgttgaaa tcctcgggcc tgaccaccgg gttggactgc
     2041 aggccgagcg agtggaaata gaagttcacg gtatcgaggc ggaagccgtc gacgccgcgc
     2101 tccagccaga agcgcatgtt gttgagcatg ccgtcctgca ccgccggatg gtggaagttg
     2161 agatccggct gcgaggcgag gaaattgtgc atgtagtact gcatgcgccg gctgtcccag
     2221 gtccaggcgc tgccgccgaa gatcgagagc cagttgttgg gcggcgtgcc gtcgggcttc
     2281 ggatcggccc agacgaacca gtcggccttg tcattggtgc ggttgagccg gctctcggcg
     2341 aaccacggat gcttgtcgga gcagtgcgag atcacctggt cgatgatcac cttcagcttc
     2401 agcgcgtgcg ccttctcgag caggcgatcg aaatcgccga gcgtgccgaa gatcggatcg
     2461 acgtcgcggt agttggagac gtcgtagccg aagtccttca tcggcgaagt gaaaaacggg
     2521 ctcagccaga tggcgtcgac gccgaggtcg gcgacgtatt ccagccgctc ggtgatgccg
     2581 acgaggtcgc cgacgccgtc gccattgtgg tcctggaacg agcgcggata gatctggtag
     2641 atcaccgcgc cgcgccacca gtcgcggtca accggcgtgt cgacagccgg cttttgttcc
     2701 gtcatcagcg gctgcgcaac cactcgtccc tccccgggcc ttccgggcgt cgcaaggcgc
     2761 tcgccggcaa acagccaaga ccgcttggcg ggcaactctt agctgccggg acgaaggcgc
     2821 gtcaactccg ggatcggctg cctcgcgccg ctgccgaaac gaaactgcta ggtttatcaa
     2881 ccctctaggc cggtccatct cgggcggtca ctgcggcgga cagttggtcg caaccgaccg
     2941 ctgtcgcagc ggcggtcagc gagtgttgtg cagcatgccc tggaaggcgc gatagctctg
     3001 cttgggcgtg cgctgctgcg tcgcgtagtc gacgtgcacg atgccgaagc g
//
LOCUS       DATAZA010000278         2565 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3743151, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000278 DATAZA010000000
VERSION     DATAZA010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2565
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3743151"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..644)
                     /locus_tag="VHZ56_07075"
     CDS             complement(<1..644)
                     /locus_tag="VHZ56_07075"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013528854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX4297768.1"
                     /translation="MADQFDLTVIGSGPGGYVCAIRAAQLGMKVAVVEKEATFGGTCL
                     NIGCIPSKALLYSTELFEEAGHNFQHLGIDIPAPTVNLAQMMAHKDETVAANVNGVSF
                     LFKKNKITSFQGTGALAGHGRVQVTSDKGPPQTIETRNVVIATGSVAATLPGIEIDEE
                     RIVTSTGALTLGAVPERLLVIGAGVIGLELGSVWARLGAKVTVVEFLDRILPGM"
     gene            complement(696..1085)
                     /locus_tag="VHZ56_07080"
     CDS             complement(696..1085)
                     /locus_tag="VHZ56_07080"
                     /inference="COORDINATES: protein motif:HMM:NF013304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HEX4297769.1"
                     /translation="MSTELWLLLWSLVVYALYLGAQSLIFRWHYGVKFAATARDHPPP
                     EGELLGRAERALKNFNETYVPFVAMLLIAHLADRGDAVVFWGAVLWFAGRLAYLPLYL
                     FGVVLVRSLVWCVIGAGLFVMFCGLVF"
     gene            complement(1082..1843)
                     /locus_tag="VHZ56_07085"
     CDS             complement(1082..1843)
                     /locus_tag="VHZ56_07085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009211418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4297770.1"
                     /translation="MAENGVLVVTGGSRGIGAATAELAAGRGYGVVVNYLSDAAAAEA
                     VVAAVLGNGGEAIAVRGDVGLPEDVEHIFRAADRLGPVRGLVNNAGFAHPPQPVAAMD
                     AARIASTLRTNVIGSFLCAQAAIGRMSTAHGGAGGAIVNLTSAAARLGGAGMYVDYAA
                     AKGAIDSFTVGLALEVAAEGIRVNAVRPGIIDTDFHARSDEPGRAQRLAAVVPMARAG
                     TAAETAAAILWLLSDEASYVTGAILDVTGGRGVFG"
     gene            complement(1854..>2565)
                     /gene="odhB"
                     /locus_tag="VHZ56_07090"
     CDS             complement(1854..>2565)
                     /gene="odhB"
                     /locus_tag="VHZ56_07090"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008548282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045252 - oxoglutarate dehydrogenase
                     complex [Evidence IEA];
                     GO_function: GO:0004149 - dihydrolipoyllysine-residue
                     succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HEX4297771.1"
                     /translation="QIDESREERVRMTRLRTTIARRLKDAQNTAAMLTTFNEVDMKPI
                     MDLRGQYKELFEKKHGVKLGFMGFFTLAVVHALKEIPNVNAEIDGDEIVYKNYAHIGV
                     AVGTDRGLVVPVVRDADKLGIAGVEKEINRLGKLARDGALSMADMQGGTFTISNGGVY
                     GSLMSTPILNAPQSGILGMHKIQDRPVAINGQVVVRPMMYLALSYDHRIVDGKEAVTF
                     LVRVKESLEAPERLVLDL"
BASE COUNT          400 a          882 c          875 g          408 t
ORIGIN      
        1 tccatgccgg gcaggatgcg gtcgaggaat tcgacgacgg tgaccttggc gccgagccgc
       61 gcccacaccg agccgagctc gagcccgatg acgccggcgc cgatcaccag cagccgctcc
      121 ggcaccgcgc cgagggtcag cgcgccggtc gaggtgacga tccgctcctc gtcgatctcg
      181 atgcccggca gcgtcgccgc caccgagccg gtggcgatga cgacatttct cgtctcgatg
      241 gtctgcggcg gtcccttgtc ggaggtcacc tgcacccggc cgtgcccggc cagcgccccg
      301 gtaccctgga acgaggtgat cttgttcttc ttgaacagga acgacacgcc gttgacgttg
      361 gcggcgacgg tctcgtcctt gtgcgccatc atctgcgcca ggttgacggt gggcgccggg
      421 atgtcgatgc ccaggtgctg gaaattatgc ccggcttcct cgaacagctc ggtcgaatag
      481 agcagcgcct tggacgggat gcagccgatg ttgaggcagg tgccgccgaa cgtcgcttcc
      541 ttttcgacga ccgcgacctt catgccgagc tgtgccgcgc ggatcgcgca gacatagccg
      601 cctggccccg agccgatcac cgtgaggtcg aattggtccg ccatgacgag cccctgattt
      661 gctgtgcctt atgtagtcgc tggcggtcgc gctggctaga acacgagacc gcagaacatg
      721 acgaaaagcc cggccccgat cacgcaccag acgaggctgc ggaccagcac gacgccgaac
      781 aggtagagcg gcaggtaggc gagccgcccg gcgaaccaca ggacggcgcc ccagaacacc
      841 accgcgtcgc cccggtcggc gaggtgcgcg atgagcagca tcgcgacgaa cggcacgtag
      901 gtttcgttga agttcttgag cgcccgctcg gcgcggccga gcagttcgcc ctcgggcggc
      961 gggtggtcgc gcgccgtggc ggcgaacttt accccgtagt gccagcgaaa gatcagcgac
     1021 tgcgcgccga ggtagagcgc atagaccacg aggctccaca gcagcagcca cagttccgtg
     1081 ctcatccgaa caccccgcgc ccgccggtga cgtcgagaat ggcgccggtg acataggagg
     1141 cttcgtccga cagcagccag aggatcgcgg ccgcggtctc ggcggcggtg cccgcgcggg
     1201 ccatcggcac cacggcggcc aggcgttgcg cccggcccgg ctcgtcgctc cgcgcgtgga
     1261 aatcggtgtc gatgatgccc ggccgcaccg cgttgacgcg gatgccctcg gctgccactt
     1321 cgagcgcgag gccgacggta aagctgtcga tggcgccctt ggccgcggca tagtcgacat
     1381 acatgcccgc cccgcccagc cgcgccgcgg cggaggtgag attgacgatg gcgccgccgg
     1441 cgccgccatg cgccgtcgac atccgcccga tcgccgcctg ggcgcagagg aacgagccga
     1501 tgacgttggt tcgcagtgtc gaggcgatgc gcgccgcatc catcgcggcg accggctgcg
     1561 gcgggtgcgc gaagccggca ttgttgacga ggccgcgcac cggcccgagc cggtcggcgg
     1621 cccggaagat gtgctcgacg tcctcgggca ggccgacatc gccgcgcacc gcgatcgctt
     1681 cgccgccatt gccgaggacg gcggcgacga ccgcttccgc cgcggcggca tcgctgaggt
     1741 agttgacgac gaccccatag ccgcgcccgg cggccagctc ggcggtcgcc gcaccgatgc
     1801 cgcggctgcc gccggtcacc accagaacgc cgttttcggc catgcgcggc gccctagagg
     1861 tcgagcacca gccgctccgg cgcctcgagg ctttccttga cgcgcacgag gaaggtcacg
     1921 gcttccttgc cgtcgacgat gcggtggtcg tagctgagcg ccaggtacat catcggccgc
     1981 accaccacct ggccgttgat cgccaccggc cggtcctgga tcttgtgcat gccgaggatg
     2041 ccggactgcg gggcgttgag gatcggcgtc gacatcagcg agccgtagac gccgccgttc
     2101 gagatggtga aggtgccacc ctgcatgtcg gccatcgaca gcgcgccgtc gcgggcgagc
     2161 ttgcccagcc ggttgatctc tttctcgacc ccggcgatcc cgagcttgtc ggcatcgcgc
     2221 accaccggca ccacgaggcc gcggtcggtg ccgacggcga cgccgatatg ggcgtagttc
     2281 ttgtagacga tctcgtcgcc gtcgatctcg gcgttgacgt tcgggatttc cttcagcgcg
     2341 tgcaccacgg cgagcgtgaa aaagcccatg aagccgagct tcacgccgtg ctttttctcg
     2401 aacagctcct tgtactggcc gcgcagatcc atgatcggct tcatgtccac ctcgttgaag
     2461 gtggtgagca tggcggcggt attctgtgca tccttgaggc ggcgcgcgat ggtggtgcgc
     2521 agccgcgtca tgcgcacgcg ttcctcacgg gactcgtcga tctgg
//
LOCUS       DATAZA010000279         5461 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3047368, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000279 DATAZA010000000
VERSION     DATAZA010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5461
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3047368"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..329
                     /locus_tag="VHZ56_07095"
     CDS             <1..329
                     /locus_tag="VHZ56_07095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012485017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4297772.1"
                     /translation="EPIYNTTKAALMMFSKTLANEVVGDNIRVNTINPGLVLTPDWIK
                     TAMQIAGEDGYRAHLQGVADEAGGMKRFATPEELAHFFVFLCSDKASYSTGSTYFVDG
                     GWLRTV"
     gene            complement(352..1506)
                     /locus_tag="VHZ56_07100"
     CDS             complement(352..1506)
                     /locus_tag="VHZ56_07100"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEX4297773.1"
                     /translation="MRTPEKTVVLVHDADGRFGCERLAAELKFVAMPLSPAAAAAIDA
                     ARAVVVDVDLRDMAKIVTLRDVLARAPHRGPLLFAVDRGPAAHLATVQGNALGGRRAI
                     HRPLSSDEVCAALAELDALPDSHGARPARASGGAGVASVNAAAAMIEGSFRALARGGM
                     LDLQQTTDASHQLLAGVNQAGLETWLDTVRAHHDGTFQHCLLVTGAAAAWANQARLPE
                     ADRLTLTTAALLHDVGKAQVPREILDKPGKLSPDEMAIVRRHPLIGREYLSRQPGLRE
                     EVLAAVAHHHELLDGSGYPFGLRGTQIASLTQILTVCDIYGALVERRAYKPPKPPADA
                     LLILADMASRGQVDYRIVRTLGAALGVELRSDLMDIVKGSAPPLPRRAAP"
     gene            complement(1588..2496)
                     /locus_tag="VHZ56_07105"
     CDS             complement(1588..2496)
                     /locus_tag="VHZ56_07105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010659137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX4297774.1"
                     /translation="MPMSDPLPPLAAIRVFEAAARHLSFTRAAAELGMTQAAVSFQIK
                     LLEERLGAPLFLRRPRALELSEAGQWLAPRTTEAFELLREAFGRFAAREHTTLTVNTM
                     HTFAAQWLAPRLGAFQLLHPEIAVRLETTIRVVDFAREEVDVVIRSGKGKWPGLWSAR
                     LVDVEFTPMVSPALLAAVGGMRSPEDLLKVPLLDPLDPWWDAWFAAHRLPPEALKREN
                     APTIMLQTITAGSAMQGLGAALLIPEFFATELASGRLVAPYEAISEDGNGYWLAFPEN
                     RRNVPRIKVFRDWLMGEIGTGGLPQG"
     gene            2584..2802
                     /locus_tag="VHZ56_07110"
     CDS             2584..2802
                     /locus_tag="VHZ56_07110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297775.1"
                     /translation="MIEMLFQDKPLGRRGWWTKLVARLAMRSHRRRLADLDLLSLSTH
                     LRRDIGLEDGMRGLVAGRTPQTAHRPGQ"
     gene            complement(2834..3097)
                     /locus_tag="VHZ56_07115"
     CDS             complement(2834..3097)
                     /locus_tag="VHZ56_07115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297776.1"
                     /translation="MKKILIVAALVAATAVPAAPSYAADMKTDMSKMSPMCFFLPLLP
                     DCLSEWKDMGKGMKMTPMAPPKMMMMPKCTPAKAGAAYMFDCK"
     gene            3304..3379
                     /locus_tag="VHZ56_07120"
     tRNA            3304..3379
                     /locus_tag="VHZ56_07120"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3337..3339,aa:Trp,seq:cca)
     gene            complement(3606..4559)
                     /locus_tag="VHZ56_07125"
     CDS             complement(3606..4559)
                     /locus_tag="VHZ56_07125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronic acid decarboxylase family
                     protein"
                     /protein_id="HEX4297777.1"
                     /translation="MTAFSGKTFLVAGGAGLIGRHLVASLLAQGATVTVADNLSSGSQ
                     AAVDAFAGQGRYRFLRHDITEPLDVEADGIFNLACPASPVHYQRDPVATWRASVIGTA
                     NLADLAARRRIRLLQASTSEVYGDPLVHPQVESYFGNVNPIGLRACYDEGKRAAETLL
                     HDLARLGRLDVRIARIFNSYGPGMRAADGRVVSNFIVQALGGQPLTIFGDGTQTRSLC
                     YVEDTVAGLLALFAGDVGAGPVNIGNPNELTIADLARLVIALTGSQSSVSFLPLPADD
                     PHVRRPDIGRARERLGWTPNVDLRAGLERTIEYFRREAGTG"
     gene            complement(4556..>5461)
                     /locus_tag="VHZ56_07130"
     CDS             complement(4556..>5461)
                     /locus_tag="VHZ56_07130"
                     /inference="COORDINATES: protein motif:HMM:NF017497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase family 90"
                     /protein_id="HEX4297778.1"
                     /translation="AIDFQHDGLPFDIRVSRLPGGFRASYAASAPRPYIYRFRAYLRT
                     WLFWLNECPPEVTGFTVNGSDGHEASLARFAASADPRRFVLVPDPHYLRGWGFPGEAR
                     LGTEAPPWPERAGAIIWRGATNGIGRMSFNADEQDDPTVLQRVRMIMKLAGAADCDVR
                     FSRISDERGLWSAAMDRFGLAAAPLPAQTWLGQKFALDIDGYTNTWSNLLIRMLFGCC
                     VLKVDSQFGFRQWYYDRIRPFEHYVPVKADMSDLAARIDWVRSHDAEARQIAAAGQAF
                     ARTLDFETVRRQAAAIITANWDKTA"
BASE COUNT          898 a         1823 c         1916 g          824 t
ORIGIN      
        1 acgagcccat ctacaacacc accaaggcgg cgctgatgat gttctccaag accctcgcca
       61 acgaggtggt cggcgacaac atccgggtca acaccatcaa tccgggcctg gtgctcactc
      121 ccgactggat caagaccgcc atgcagatcg ccggtgagga cggctaccgg gcgcatctgc
      181 agggcgtcgc tgacgaggcc ggcggcatga agcgcttcgc cacgccagaa gagctggcgc
      241 atttcttcgt cttcctgtgc tccgacaagg cgagctactc gaccggcagc acatacttcg
      301 tcgatggcgg ctggctgcgg acggtctaga cggacgcacg caagcgcggc gtcagggtgc
      361 ggcgcggcgc ggcagcggcg gagcgctgcc cttgacgatg tccatcagat cgctccgcag
      421 ctcgaccccg agtgctgcgc ccagcgtccg cacgatgcgg tagtcgacct gtccgcggct
      481 cgccatgtcg gcgaggatta gcagcgcatc cgccggcggc ttgggcggct tgtaggcgcg
      541 gcgctcgacc agcgcgccgt agatgtcgca gacggtgagg atctgggtca gcgacgcgat
      601 ctgcgtgccg cgcaatccga agggatagcc gctgccgtcg agcagctcgt gatggtgcgc
      661 gacggcggcg aggacctcct cgcgcaggcc gggctggcgg ctgaggtatt cgcgtccgat
      721 cagcgggtgg cggcggacga tggccatctc gtccggcgac agcttgccgg gcttgtcgag
      781 gatttcgcgc ggcacctgcg ccttgccgac gtcgtgcagc agcgccgccg tggtgagggt
      841 cagccggtcg gcctccggca gccgggcctg gttggcccat gccgcggccg cgccggtcac
      901 caggaggcag tgctggaaag tgccgtcgtg atgcgcccgc acggtgtcga gccaggtctc
      961 gaggccggcc tggttgacgc cggcaagcag ctggtggctc gcatcggtag tctgctggag
     1021 atcgagcatg ccgccgcggg cgagggcccg gaacgagcct tcgatcatcg ccgctgcggc
     1081 gttgaccgag gcgactcccg cgcccccgct ggcgcgggcc ggtcgcgccc cgtgggagtc
     1141 cggcagcgca tcgagttcgg cgagggcggc gcagacttcg tcgcttgaga gcggacggtg
     1201 gatcgcgcgg cggccgccca gcgcattgcc ctgcaccgtc gccaggtgcg ccgccggacc
     1261 gcgatcgacc gcgaacagca gcggtccgcg gtgcggcgcc ctggccagca cgtcgcgcag
     1321 ggtcacgatt ttggccatgt cgcgcagatc gacgtcgacc acgaccgccc gggcagcatc
     1381 gatcgccgcc gcggcggccg gagacagcgg catcgcgacg aacttcagct cggcggcgag
     1441 ccgttcacag ccgaagcggc cgtcggcatc gtggacgaga acaactgtct tttcaggcgt
     1501 gcgcaccggt gacgctcgga accagtcggc aggagggacg cgagacgata ccggaggccc
     1561 ggttaacaac ggccgaatcc ggggcgatca gccctgcggc aatccgccgg tcccgatctc
     1621 gcccatcagc cagtcgcgaa agaccttgat cctgggcacg ttgcgccggt tctccggaaa
     1681 cgccagccag tagccgttgc cgtcctcgct gatcgcctcg tagggcgcca ccagccgccc
     1741 ggaggcgagc tcggtggcga agaattcggg gatcagcaac gccgcgccca gcccctgcat
     1801 cgccgagccg gcggtgatcg tctgcagcat gatggtcggc gcgttctcgc gcttcagcgc
     1861 ctccggcggc agccggtgcg cggcaaacca ggcgtcccac cagggatcga gcggatcgag
     1921 cagcggcacc ttgagcaggt cttcgggcga ccgcatgccg ccgaccgccg cgaggagcgc
     1981 cggcgaaacc atcggggtga actcgacgtc gaccagccgg gcggaccaca ggccgggcca
     2041 tttgcccttg cccgagcgga tcacgacgtc gacctcctcg cgcgcgaaat cgacgacgcg
     2101 aatcgtcgtc tcgagccgca cggcgatctc ggggtgcagc agctggaagg cgccgagccg
     2161 cggcgccagc cactgcgcgg caaaggtgtg catggtgttg acggtgagag tggtgtgctc
     2221 gcgtgccgca aagcgcccga acgcctcgcg cagcagctcg aacgcctcgg tggtgcgcgg
     2281 cgccagccac tggccggcct cgctgagttc cagcgcccgc ggccggcgaa ggaacagcgg
     2341 cgcgccgagc cgctcctcga gcagcttgat ctggaagctc accgccgcct gcgtcatccc
     2401 cagctccgcc gcggcgcggg tgaagctcag gtgccgcgcg gcggcttcga atacgcggat
     2461 ggcggcgaga gggggaaggg gatcgctcat tggcataagc tcagcttatg gacgataccc
     2521 gatcctgaat tggatttcca gacctcgcaa gcgcattcct tggctcgcaa cagcagatgc
     2581 gaggtgatcg aaatgctctt tcaggacaag ccgctgggcc ggcggggatg gtggacgaag
     2641 ctggtggcgc ggctggcgat gcggtcgcac cggcggcgcc tcgccgacct cgacctgctg
     2701 tcgctcagca cccatttgcg gcgcgacatc ggcctcgagg acggtatgcg tggactcgtc
     2761 gccggccgca ccccccagac agcacatcgc cccggccagt gaccggggcg atgaaagcga
     2821 cctgcaggtg tcgttacttg cagtcgaaca tgtaggcggc gccggccttg gcgggggtgc
     2881 acttgggcat catcatcatc ttcggcggcg ccatcggcgt catcttcatg cccttgccca
     2941 tgtccttcca ctccgacagg cagtcgggca gcagcggcag gaagaagcac atcggcgaca
     3001 tcttcgacat gtcggtcttc atgtcggccg cataggaggg cgcggccggc acagcggtgg
     3061 cggccacgag agcggccaca atcagaattt ttttcatcgt tggtatcccc tgggacgtcc
     3121 cgcgctgagc cgcgggcgcc gcgaaggcta tgacactgcc gacgttgaca caattgcctc
     3181 tgtttcaaat cggggcaatg cgcggattcg gcaacactca agccccggcg tgacgtgcag
     3241 cccgagactt gcgcccgaga cttgcgccgc atcggctttg cgattagatc ggcctcgcct
     3301 cggaggggta tagctcagtt ggtagagcat cggtctccaa aaccgagggt cgagggttca
     3361 agtccttctg cccctgccaa ggcaaattct gccccttagc tcggcggccc tggcggcgcc
     3421 aaacgccggc gcgaaccggt gtcttgccag gctgcggcga tatgggacac tccgggtcgg
     3481 cggggttgga aggccggcag gccagcgtgc aatgatccgc gagatcgagc gacgagcaga
     3541 tcgccgcgct ccgtcgccac cctgaatcgc cccagtccgc gcctcccggc tcagtccgag
     3601 caccctcagc cggtgcctgc ttcgcggcgg aaatactcga tcgtccgctc gaggccggcg
     3661 cgcaaatcca cgttcggagt ccagcccagc cgctcgcggg cccgaccgat gtccgggcgc
     3721 cgcacatgcg ggtcgtccgc cggcagcggc aggaagctga cactggattg gctgccggtg
     3781 agggcgatga cgagccgcgc gaggtcggcg atcgtcaact cgttgggatt gccgatgttg
     3841 acgggcccgg ccccgacgtc cccggcgaac agcgccagga ggccggcgac ggtgtcctcg
     3901 acgtagcaga gcgagcgggt ctgggtaccg tccccgaaga tggtgagcgg ttgtcccccg
     3961 agggcctgga cgatgaagtt ggacacgacc cgaccgtcgg ccgcccgcat gcccggcccg
     4021 tagctgttga aaatgcgggc gatgcggacg tcgagccgcc ccagccgggc gaggtcgtgc
     4081 agaagcgtct cggctgcccg cttgccctcg tcgtaacagg cgcgcaggcc gatcgggttg
     4141 acgttgccga aatagctctc gacttgcggg tgcaccaggg gatcgccata aacctcgctg
     4201 gtcgaggcct gcagcagccg gatgcggcgc cgcgccgcga gatcggcaag gttggccgtg
     4261 ccgatgacgc tcgcccgcca ggtggcgacg ggatcgcgct ggtagtggac cggagaagcc
     4321 gggcaggcga ggttgaagat gccgtccgcc tcgacgtcga gcggctcggt gatgtcgtgc
     4381 cgcaggaagc ggtagcggcc ctgtccggca aaggcgtcga cggcagcctg cgatccgctg
     4441 gagagattat cggccacggt caccgtcgcg ccctgcgcga gcagcgaggc gacgaggtgc
     4501 cggccgatga gtcccgcccc gccggccacg aggaaggtct tgcccgaaaa agccgtcacg
     4561 ccgtcttgtc ccagttcgcg gtgatgatcg ccgccgcctg gcgtcgcacc gtctcgaaat
     4621 cgagggtacg ggcgaacgcc tgtccggccg cggcgatctg ccttgcctct gcatcgtggc
     4681 tgcggaccca gtcgatcctg gcggcgaggt cgctcatgtc ggcctttacc ggaacgtagt
     4741 gctcaaatgg gcgaatgcga tcgtagtacc attgccggaa gccgaactgc gaatcgacct
     4801 tcagcacgca gcagccgaac agcatgcgga tcaaaaggtt cgaccaggtg ttggtatagc
     4861 cgtcgatgtc gagcgcgaac ttctggccga gccacgtctg tgccggcagc ggcgccgcgg
     4921 caaggccgaa acgatccatc gcggccgacc agagcccgcg ctcgtcgctg atgcgcgaga
     4981 accggacgtc gcaatcggcc gcgccggcca gcttcatgat catccgcacc cgttgcagca
     5041 cggtggggtc gtcctgctcg tccgcattga agctcatccg gccaatgccg ttggtggccc
     5101 cgcgccagat gatggcaccg gcgcgctccg gccagggcgg cgcttccgtg cccaggcgcg
     5161 cttcgcccgg aaacccccag ccgcgcaaat agtgcggatc ggggacgagc acgaagcgcc
     5221 gcgggtcggc cgaggccgca aagcgcgcca gggatgcctc atgcccgtcc gagccgttca
     5281 ccgtgaagcc ggtgacctcg gggggacact cgtttagcca gaacagccag gtgcgcaggt
     5341 aggcccggaa gcgatagatg taaggacgcg gcgcgctggc ggcgtaggag gcgcgaaagc
     5401 cgcctggcag gcgtgaaacg cggatgtcga acggcagccc gtcgtgctga aaatcgatcg
     5461 c
//
LOCUS       DATAZA010000280         4070 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3858905, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000280 DATAZA010000000
VERSION     DATAZA010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4070
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3858905"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1692
                     /gene="aspS"
                     /locus_tag="VHZ56_07135"
     CDS             <1..1692
                     /gene="aspS"
                     /locus_tag="VHZ56_07135"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEX4297779.1"
                     /translation="DHGGLLFIDLRDHYGLTQLVVDPDSTAFKLAETVRAEWVIRVDG
                     EVKARTPETSNAKQPTGQIEVFIRELEVLGEAKELPLPVFGEPDYPEDIRLRYRFLDL
                     RRETLHANIVKRTKVISSIRRRMDGAGFAEYSTPILTASSPEGARDFLVPSRIHPGTF
                     FALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLEMSFVTQEDV
                     WTTIQPVITGLFEEFAEGKPVTKEWPRIPYQTAIRKYGSDKPDLRNPIEMQQVNAHFA
                     GSGFKVFAGQLAADDKTEVWAIPAKTGGSRAFCDRINGWAQGEGQPGLAYIFWRTENG
                     ALEGAGPVAKNIGPERTEALRQQLGLGEGDAVFFVLGRPEKMYRFAGEARTKVGTELN
                     LVDKDQYKLCWIVDFPFYEWSEEEKRIDFAHNPFSMPQGGLEALRGQDPLTIKAFQYD
                     AVCNGFEIASGSIRNQEPETMVAAFGLTGKSREEVEEQFGGLYRAFQYGAPPHGGAAF
                     GIDRMVMLLCGAENLREITLFPMNQQAQDLLMGAPSAASAKQLRELHLRLNLPDK"
     gene            1788..3401
                     /locus_tag="VHZ56_07140"
     CDS             1788..3401
                     /locus_tag="VHZ56_07140"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX4297780.1"
                     /translation="MKSRYANIFTLLAAILAFAPVMGVNWLLDGYVREREGAQLQQSL
                     AAITDRIQAGADDGIAQLRQILADSPSLCTPTFVANVRKAMQASLYLKEVVVENGDGV
                     QYCDAFGASVAYSPLSAGLAIPGQTETMAVGKLGDLATPVLKISQAFGDQRIVSVFVP
                     IVSNTAKGLLTRFRPTAMVRISLSDGTPVLVAGDPSAYDDRRDVEFLAAQGFAGELPI
                     RAEAAIPFAVVRADYADLNVSFTVLACLMSGAFLVMALQYVRRSKLPAFDLERAIASG
                     EIRPYYQPVINLRTGALSGCEVLCRWQKRNGELVMPGAFIDYAEITGLAIPMTLSLMQ
                     QVRQDLGDLCLEMPDLKVSINLFEGHFRDGTVVEDVRAIFGGSAVAFRQLVFEITERH
                     PLANSTTAKSVIAGLHALGTRIAMDDVGTGHSNLAYMQTLGVDVIKIDRVFIDMIKAE
                     TQQVPVLDGLIAMCRDLGTEIVAEGVETEAQALYLRKHGVVMAQGFLFAPALKLTAFR
                     ELARALNGSARTAPLPLPAGAIIGAGVAA"
     gene            3523..>4070
                     /locus_tag="VHZ56_07145"
     CDS             3523..>4070
                     /locus_tag="VHZ56_07145"
                     /EC_number="1.1.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008194480.1"
                     /note="NADP-dependent; catalyzes the oxidative
                     decarboxylation of malate to form pyruvate; decarboxylates
                     oxaloacetate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HEX4297781.1"
                     /translation="MAADVNEQQARREAALHFHEFPKPGKLEIQPTKPLGNQRDLALA
                     YSPGVAAPCEVIAEDPDAVFKYTGKGNLVAVISNGTAVLGLGAIGALASKPVMEGKAV
                     LFKKFAGIDVFDIEVDETDPKKFIEVVRPLEPTFGGINLEDIKAPECFEIEEALRARM
                     NIPVFHDDQHGTAIIVGAAVLNG"
BASE COUNT          686 a         1366 c         1372 g          646 t
ORIGIN      
        1 gatcatggcg gcctgctgtt catcgacctg cgcgaccatt atggcctgac gcagctggtg
       61 gtcgaccccg attccaccgc tttcaagctt gccgagacgg tgcgcgccga atgggtcatc
      121 cgggtcgatg gcgaggtcaa ggcgcggacc cccgagacga gcaatgccaa gcagccgacc
      181 gggcagatcg aggtcttcat ccgcgagctc gaagtgcttg gcgaggcaaa ggaattgccg
      241 cttccggtgt tcggtgagcc ggactatccc gaggatatcc ggctgcgcta ccgcttcctc
      301 gacctcaggc gcgagacgct gcacgccaat atcgtcaagc gcaccaaggt gatctcctcg
      361 atccgccggc gcatggacgg tgccggcttt gccgaatatt cgacgcccat cctgacggcg
      421 tcgtcgccgg agggggcgcg cgacttcctc gtgccgtcgc gcatccatcc cggcacgttc
      481 ttcgccctgc cgcaggcgcc gcagcagtac aagcagctgc tgatggtcgc cggcttcgac
      541 cgctatttcc agatcgcccc gtgcttccgc gacgaggacc cgcgtgccga ccggctgccg
      601 ggcgagttct accagctcga cctcgagatg agcttcgtga cgcaggaaga cgtctggacg
      661 acgatccagc cggtgatcac cgggctgttc gaggaattcg ccgagggcaa gccggtgacc
      721 aaagagtggc cgcgcatccc gtaccagacg gcgatccgca aatacggctc cgacaagccg
      781 gacctgcgca acccgatcga gatgcagcag gtcaacgcgc atttcgccgg ctccggcttc
      841 aaggtgttcg ccggccagct cgccgccgac gacaagaccg aagtgtgggc gatcccggcg
      901 aagactggcg gctcgcgcgc cttctgcgac cgcatcaacg gctgggcgca gggcgaaggc
      961 cagccggggc tggcgtatat tttctggcgc accgagaacg gcgcgctgga gggcgccggt
     1021 cccgtggcca agaacatcgg accggagcgc accgaggcgc tgcggcagca gctcgggctg
     1081 ggcgagggcg acgcggtgtt cttcgtgctc ggccggccgg aaaagatgta ccgctttgcc
     1141 ggcgaggcgc ggacgaaggt cggcaccgag ctgaacctcg tcgacaagga ccagtacaag
     1201 ctgtgctgga tcgtcgattt cccgttctac gagtggagcg aggaggaaaa gcgcatcgac
     1261 ttcgcgcaca acccgttctc gatgccgcag ggcgggctcg aggcgctgcg cgggcaggac
     1321 ccgctgacca tcaaggcgtt ccagtacgac gcggtctgca acggcttcga gatcgcctcg
     1381 ggctcgatcc gcaaccagga acccgagacg atggtcgcgg cgttcgggct gaccggaaag
     1441 tcgcgcgagg aggtcgagga gcagttcggc gggctctacc gcgccttcca gtatggagct
     1501 ccgccgcatg gcggcgcagc attcggcatc gaccgcatgg tgatgctgct gtgcggtgcc
     1561 gagaatctgc gcgagatcac gctgttcccg atgaaccagc aggcccagga cctgctgatg
     1621 ggggcgccga gcgcggccag cgccaagcag ctgcgcgaac tgcacctgcg gctcaacctg
     1681 ccggacaagt gagccggcga aaccgttcgc acgaaaggtt aatcgtcgtt taccggagct
     1741 taaacgccgg ctgctagtgc tgtcctgtcg gggagcgggc gcgcggcgtg aagtccaggt
     1801 acgcaaacat cttcacgctg ctcgcggcga tcctggcgtt cgcgccggtg atgggcgtca
     1861 actggctgct cgacggctat gtgcgcgagc gcgaaggggc gcagctccag caatcgctcg
     1921 ccgccatcac cgaccgcatc caggcgggcg ccgacgacgg catcgcgcaa ctgcgccaga
     1981 tcctcgccga cagcccgtcg ctgtgcacgc cgacctttgt cgccaatgtg cgcaaggcca
     2041 tgcaggccag cctctatctc aaggaggtcg tggtcgagaa cggcgacggc gtgcagtatt
     2101 gcgacgcctt cggcgccagt gtcgcctatt cgccgctgtc ggcaggtctc gccattcccg
     2161 gccagaccga gacgatggcg gtcggcaagc tgggcgacct cgcgaccccg gtgctgaaga
     2221 tcagccaggc gttcggcgac cagcgcatcg tgtcggtgtt cgtgccgatc gtctcgaaca
     2281 ccgcgaaggg gctgctcacc cgcttccgcc cgaccgccat ggtgcggatt tcgctgagcg
     2341 acggcacccc cgtgctggtc gccggcgacc cgtcggccta cgacgaccgg cgcgacgtcg
     2401 agttcctggc ggcgcagggc tttgccggcg agctgccgat ccgcgccgaa gccgccattc
     2461 cgttcgccgt ggtgcgcgcc gactacgccg atctcaacgt cagcttcacc gtgctcgcct
     2521 gcctgatgag cggcgcgttc ctggtgatgg cgctgcaata tgtgcggcgc agcaagctgc
     2581 cggccttcga cctcgagcgc gccatcgcct cgggcgagat caggccgtac taccagccgg
     2641 tgatcaattt gcgcaccggg gcgctgtccg gttgcgaagt gctctgccgc tggcagaagc
     2701 gcaacggcga gctggtgatg cccggcgcct tcatcgacta tgcggagatc accgggctgg
     2761 cgatcccgat gacgctgagc ctgatgcagc aggtgcgcca ggatctcggc gacctctgcc
     2821 tcgagatgcc ggacctcaag gtgtcgatca acctgttcga ggggcatttc cgcgacggca
     2881 cggtggtcga ggatgtgcgc gcgatcttcg gcggctccgc cgtggcgttc cgccagctgg
     2941 tgttcgagat caccgagcgg cacccgctgg ccaattccac cacggccaag agcgtcatcg
     3001 ccgggctgca tgcgctcggc acccgcatcg ccatggacga tgtcggcacc gggcactcga
     3061 acctcgccta catgcagacg ctgggcgtcg acgtgatcaa gatcgaccgc gtcttcatcg
     3121 acatgatcaa ggccgagacc cagcaggtgc cggtgctcga cgggctgatc gccatgtgcc
     3181 gcgacctcgg caccgagatc gtcgccgagg gcgtcgagac cgaggcgcag gcgctgtacc
     3241 tgcgcaagca cggcgtcgtg atggcgcagg gcttcctgtt cgccccggcg ctgaagctga
     3301 cggcgttccg cgagctggcg cgcgccctca acggcagcgc ccggacggcg ccgctgccct
     3361 tgcccgccgg cgccatcatc ggcgcgggcg tcgccgcctg aggccatagc ggccttccct
     3421 tgccggcgaa ttggtggcac cacaccccaa ggtcttgtgg ctgcgctcga aaccggaaac
     3481 gggccggatt ttccgggcgg cgcagccggt gaggggagtg ccatggcggc cgacgtcaac
     3541 gagcagcagg cgcggcgcga ggcggcgctg catttccacg aattccccaa gcccggcaag
     3601 ctcgaaatcc agccgaccaa gccgctcggc aaccagcgcg atctggcgct cgcctattcg
     3661 cccggtgtcg cggcgccctg cgaggtgatc gccgaagacc ccgacgcggt gttcaaatac
     3721 accggcaagg gcaacctcgt ggcggtgatc tcgaacggca ccgcggtgct cggcctcggc
     3781 gccatcggcg cgctcgccag caagccggtg atggaaggca aggcggtgct gttcaagaag
     3841 ttcgccggca tcgacgtgtt cgacatcgag gtcgacgaga ccgatcccaa gaagttcatc
     3901 gaggtggtgc ggccgctcga gccgaccttc ggcggcatca acctcgagga catcaaggcg
     3961 cccgagtgct tcgagatcga ggaagcgctg cgcgcccgca tgaacatccc ggtgttccac
     4021 gacgaccagc acggcaccgc catcatcgtc ggcgccgcgg tgctgaacgg
//
LOCUS       DATAZA010000281         3082 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_841621, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000281 DATAZA010000000
VERSION     DATAZA010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3082
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_841621"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            29..673
                     /locus_tag="VHZ56_07150"
     CDS             29..673
                     /locus_tag="VHZ56_07150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018185228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like cysteine peptidase"
                     /protein_id="HEX4297782.1"
                     /translation="MSSTIRITMGGALVALIMFGTPAEAEQAAAPAPVDFTNVAFAPT
                     TGDTSIPVGAEDFCRRYPTDCAANGRVIKAEHLTSASWNELVAVNTNVNTTIIPETDE
                     ANYHVAEYWTYPTDGRGDCEDYALEKRKELIAAGWDASALLMTVVREKSGDGHAVLMV
                     RTDRGDLILDNQDARVLLWKDTPYDYIKRQSQADPGKWVGLNDNRFPVAVTASN"
     gene            complement(790..1110)
                     /locus_tag="VHZ56_07155"
     CDS             complement(790..1110)
                     /locus_tag="VHZ56_07155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297783.1"
                     /translation="MVFELLLAGFIMAVGLAMAGTGTYFYQWVIGEPAMLRYDGKTFV
                     HTMGHLLMSFLCGPFIMLQMGWKQEDDGTLSVGSVLVSALVAFGWSFITGLLLMGIYF
                     AILG"
     gene            1223..1900
                     /locus_tag="VHZ56_07160"
     CDS             1223..1900
                     /locus_tag="VHZ56_07160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297784.1"
                     /translation="MHASIAADRARHDGHTIGFTLGVIALVVALGGVGLAYVLTAMTR
                     GAPEGGSVVQSGGIVTRTIGATSLTIPAAWLTGDDQAAGGFAKQVDFAVTLPLGPDGA
                     ARRIEVSLTQPSRVLPSASLLDGVYLHEFLPAQLSGPPGLIGKPLSGQEGYENETVWY
                     DPINASPFVAKCAAPVTAGQPGNCLRAVYLGSGIAAIYSFADDLLPNWRKFDAQMHPL
                     LNEIGAL"
     gene            complement(1897..2223)
                     /locus_tag="VHZ56_07165"
     CDS             complement(1897..2223)
                     /locus_tag="VHZ56_07165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015598248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HEX4297785.1"
                     /translation="MLVVTTNDLPGYRVVEVFGLVRGITVRSRSVFGTLGGSLQSIVG
                     GNLTLFTTLAETSRQEALSLMLEHAEQHGANAVIAMRYDSNDISPGITEMLAYGTAVR
                     VEKAGA"
     gene            complement(2225..2443)
                     /locus_tag="VHZ56_07170"
     CDS             complement(2225..2443)
                     /locus_tag="VHZ56_07170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3126 family protein"
                     /protein_id="HEX4297786.1"
                     /translation="MNHPEIIKLQKYLQLKFNSRAIDVRPRQKQNDSVEVYLGEEFLG
                     LIYVDDEDGDKSYNFQMAILEEDLAEVK"
     gene            complement(2543..>3082)
                     /gene="cysE"
                     /locus_tag="VHZ56_07175"
     CDS             complement(2543..>3082)
                     /gene="cysE"
                     /locus_tag="VHZ56_07175"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEX4297787.1"
                     /translation="LERDPATHRAIVPFLYFKGFQAIQTHRFAHALWAAGRRDFALYL
                     QSRSSQVFQVDINPAARIGKGLMLDHATGFVVGETAVIGDNCSILQGVTLGGTGKADE
                     DRHPKIGNGVLIGAGATVLGNIRVGDCARIGAGSVVVRDVPPRVTVVGVPARIVGEAG
                     APQPASAMDQVASFPDFSG"
BASE COUNT          551 a         1033 c         1000 g          498 t
ORIGIN      
        1 tcttggctcc catcggggag ttacaagaat gtccagcacg atcaggatca ccatgggagg
       61 cgcgctcgtc gcgctcatca tgttcgggac gccggcagag gcggagcagg ccgctgcccc
      121 cgcgcccgtc gatttcacca acgtcgcctt cgcaccgacc acgggcgaca ccagcattcc
      181 cgtcggagcg gaggatttct gccgccgcta tccgaccgac tgcgcggcca atggtcgagt
      241 gatcaaggcc gagcacctga cgtcggcaag ctggaacgaa ctggtggccg tcaacaccaa
      301 cgtcaacacc acgatcatcc cggaaacgga cgaggccaac taccacgtgg cggaatactg
      361 gacttatccc acggacggcc ggggcgactg cgaggactat gcgctcgaaa agcgcaagga
      421 actgatcgcc gcgggctggg atgcgagcgc cctgctgatg acggtggtgc gcgaaaagag
      481 cggcgacggc cacgcggtgc tgatggtccg caccgaccgc ggcgacctca ttctcgacaa
      541 ccaggatgcc cgggtcctgc tgtggaagga cacgccctac gactacatca agcggcagtc
      601 gcaggccgac ccgggcaagt gggtcgggct caacgacaac cgcttcccgg ttgccgtgac
      661 ggcatccaac tagaagtaga ttttaccttc gggcgcccac cccccgatac gcggcgcctg
      721 atgcagtggg gccggtcctt cccccgagac cggccccatc catttcggcc ctgcccgccc
      781 ccgcaggcgt cagccgagga tcgcgaaata gatgcccatc agcagcaggc cggtgatgaa
      841 gctccagccg aatgcgacga gggcggaaac cagcaccgag ccgaccgaaa gcgtgccgtc
      901 gtcttcctgc ttccagccca tctgcagcat gatgaagggg ccgcagagga agctcatcag
      961 caggtggccc atcgtgtgca cgaaggtctt gccgtcgtag cgcagcatcg ccggctcgcc
     1021 gatgacccac tgatagaagt aggttccagt gcctgccatg gcgaggccga ccgccatgat
     1081 gaacccagcc agaagcaact cgaacaccat cacgcacgcc ccggcgacac gtcgttgcgt
     1141 gtcgccctgt taactcttca ttaatcataa gggtggccca atcggctgtc acctcctgcc
     1201 ctaacgagtg gttaattcgg ccatgcacgc ttcgatcgcc gcggaccgcg cgaggcacga
     1261 cgggcacacg atcggcttca cgctgggggt gatcgcgctg gtggtggcac tgggcggcgt
     1321 cggtctcgcc tacgtgctca ccgcgatgac ccggggagcc cctgagggcg gcagcgtcgt
     1381 ccagagtgga ggcatcgtca cccggaccat cggcgcgacc agcctcacca tcccggccgc
     1441 ctggctcact ggcgacgatc aggcagccgg cggctttgcc aagcaggtgg acttcgccgt
     1501 gacgcttcct ctcgggccgg atggcgcagc ccggcggatc gaagtgtcgc tgacgcagcc
     1561 gagccgcgtg ctgccgagcg cttcactgct cgatggcgtc tatctccacg aattcctgcc
     1621 ggcgcagcta agcggcccgc cgggtctgat cggcaagccg ctgtccggcc aggaggggta
     1681 tgagaacgag acggtctggt acgacccgat caacgcctca ccgttcgtcg ccaagtgtgc
     1741 ggcgccggtg accgcgggcc agccgggcaa ctgcctgcgg gccgtgtatc tcggctcggg
     1801 gatcgcggcg atctacagct tcgccgacga tctgctgccg aactggcgca agttcgacgc
     1861 ccagatgcat ccgctgctga acgagatcgg cgccctttag gccccggcct tttccacccg
     1921 cacggcggtg ccgtaggcca gcatctcggt gatgccgggg ctgatgtcgt tggaatcgta
     1981 tcgcatggcg atcacggcat tggcgccatg ctgctcggcg tgctcgagca tcaggctcag
     2041 ggcctcctgg cgcgaggtct ccgcaagagt ggtgaacagc gtcaggttgc cgccgacgat
     2101 cgactgcagc gatccgccca gcgtaccgaa gacgctgcgc gaacgcacgg tgatgccgcg
     2161 gacgaggccg aagacctcga cgacgcggta cccgggcagg tcgttcgtcg tcaccaccag
     2221 catgtcattt cacctcggcg aggtcctcct cgaggatcgc catctggaag ttataggatt
     2281 tgtcgccgtc ctcgtcatcg acgtagatga gaccgaggaa ttcctcgccg agatagacct
     2341 cgacgctgtc gttctgcttc tggcgcggcc gcacgtcgat ggcccggctg ttgaatttga
     2401 gctgcaggta tttctgcagc ttgatgatct cggggtggtt caactcaaac tccgcaacgc
     2461 attggggtgg gccaccatag gcattcacgc gccgggggca atcccgccgc accttttctc
     2521 ggccgcagca gacggcgagc actcagccgc tgaaatcggg gaacgaggcg acctggtcca
     2581 tggccgaggc cggctgcggc gctcccgcct cgccgacaat gcgagccggc acgccgacca
     2641 ccgtcacccg cggcggcacg tcgcgcacca ctacggaacc ggcgccgatc cgggcacagt
     2701 cgccgacccg gatgttgccg agcacggtgg caccggcgcc gatcagcacg ccgttgccga
     2761 tcttgggatg acggtcctcg tcggccttgc cggtgccgcc cagcgtcacg ccctggagga
     2821 tcgagcaatt gtcgccgatc acggccgtct cgccgacgac gaagccggtg gcgtggtcga
     2881 gcatgagccc cttgccgatc cgggcggccg gattgatgtc gacctggaac acctggctcg
     2941 agcggctctg caggtagagc gcgaagtcgc ggcgcccggc ggcccacagc gcatgcgcaa
     3001 agcggtgcgt ctggatggcc tggaagccct tgaaatagag gaacggcacg atggcgcggt
     3061 gcgtggccgg atcgcgctcg ag
//
LOCUS       DATAZA010000282         3395 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_725542, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000282 DATAZA010000000
VERSION     DATAZA010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3395
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_725542"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(182..751)
                     /locus_tag="VHZ56_07180"
     CDS             complement(182..751)
                     /locus_tag="VHZ56_07180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297788.1"
                     /translation="MRLTPVLLLLAAFAAPAFADETIADQAHDAYRLYAGGLSQKDFL
                     FGQYATGLFSGIGGSWVRLGGPDDKSGMESYGPQSQKLCGTPSAVTLAASSPDTMSLA
                     TNLTGDNFTQDYTLVSGSTFAVHTDPVPYFKAVGLGPDKSGDTYDQQRAILLSQANGV
                     LQIYRPSPDILVLSSQQLYPIVLARCPKT"
     gene            860..2266
                     /locus_tag="VHZ56_07185"
     CDS             860..2266
                     /locus_tag="VHZ56_07185"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEX4297789.1"
                     /translation="MPDALPELDLAWTLLQQQRFAEAAAQAQQVLGRHPGNISALACH
                     AMANWKAEGDIATSIAEMQRAVAAAPAEASLRHNLATLLASSGDVAGAAGQFREALRI
                     KPDDTLAFYGLTQNMKFREAVEPVPAMVALAADPGLGAGRREMLLFGLAKVFDDLGSP
                     EKAMEYALEANRLGARPFEWGGETRSLEELQELARLDGFSRMRTSGHPSRAPLFIVGM
                     PRSGTTLVEAILARHPEVLALGESNQIRDAEVAAYLRRPVASRNVGRQQLMLELDRDW
                     LAARAEEMAGRWAARARAPFAVATDKLPENAVRLGLIKRLFPNARVIHVRRHPLDTGV
                     SNFFQRFAAGQGYSTRLDWIGARTRQVADSMEIWKRSLDLPILDVSYERLVADPEPQS
                     RRIVAFAGLAWTDACLSPEQATHSILTASQWQVRQPINTASVARWQRYAPWLGPMIEA
                     MGGMEWIETEVADIAARG"
     gene            complement(2284..3225)
                     /locus_tag="VHZ56_07190"
     CDS             complement(2284..3225)
                     /locus_tag="VHZ56_07190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HEX4297790.1"
                     /translation="MRRKIIIDTDPGQDDAVAILLALGSPAEIEVLGVVAVAGNVGLA
                     QNAQNALKVVELSGRTDTPVYAGCERPMRRKLVTAEYVHGKTGLDGPTLPDPRIKLRE
                     QHGVDFIIDTLRREPAGTVTLCALGPLTNLGMAFVKAPDIMPRVQEIVLMGGGLFEGG
                     NITPAAEFNIYVDPEAADVVFHSGIPITVVPLDVTHFMLSTKTRVARFRALGNRTGVA
                     TAEMLEFFERYDEQKYGWDGGPLHDPCVIAFLLKPDLFKGRHVNVAIETTSELTRGMT
                     VVDWWGVTGRAKNANYLRSGDSDGFYDLLFERLATLA"
BASE COUNT          536 a         1085 c         1263 g          511 t
ORIGIN      
        1 gcgaagcaga ggtagatcag gtcgccgacg aggatgccga caatcatcgg cacggcgctg
       61 gcaaagccgc cgccgagcgc acgggcgacg atggccgcga cgccggggcc ggggaccagc
      121 acggcgacca cgtaggcgat ggtgaaggcg acaagcgtca gcaggtccaa aggccggctc
      181 ctcaggtctt cgggcagcgc gccagcacga tcgggtagag ctgctggctg ctcagcacga
      241 ggatgtcggg cgaagggcgg tagatctgca gcacgccgtt ggcctggctg aggaggatgg
      301 cccgctgctg gtcgtaggtg tcgccgctct tgtccgggcc gaggccgacg gccttgaagt
      361 aggggaccgg gtcggtgtgc acggcgaagg tcgatccgga gacgagggtg tagtcctggg
      421 tgaagttgtc gccggtgagg ttggtggcga gcgacatggt gtccggcgag ctcgcggcga
      481 gagtcaccgc cgacggggtg ccgcagagtt tctgcgactg cgggccgtag ctctccatgc
      541 cgcttttgtc gtcggggccg ccgaggcgca cccagctgcc gccgatgcca ctgaaaaggc
      601 cggtggcgta ctgtccaaac aggaagtcct tctgcgacag gccgccggcg tagagccgat
      661 aggcgtcatg cgcctggtcg gcgatggtct cgtcggcgaa agccggcgcg gcaaaggccg
      721 cgagcagcag caaaacaggg gtcagacgca tgcggggctc cagattttcg gccggacact
      781 attcgaggcg gggacaacgc tcaacgtgat cttcagccgc cggccgtgct agggaggccg
      841 ccgaccgaaa aggatgccga tgcccgacgc gctgcccgaa ctcgatctcg cctggacgct
      901 gctgcagcag cagcggttcg ccgaggccgc cgcgcaggcg cagcaggtgc tcgggcgtca
      961 tcccggcaat atctcggcgc tcgcctgcca cgcgatggcc aactggaagg ccgagggcga
     1021 catcgcgacc tcgatcgcgg aaatgcagcg ggccgtggcg gcggcgccgg ccgaagcgtc
     1081 gcttcgccac aatctcgcga cgctgctggc ctcgagcggc gatgtcgccg gcgcggccgg
     1141 gcagttcagg gaggccctca ggatcaagcc ggacgatacg cttgccttct acgggctcac
     1201 gcagaacatg aagttccgcg aggcggtcga gccggtgccg gcgatggtgg cgctggcggc
     1261 cgatccgggg ctcggggccg gccgccgcga aatgctgctg ttcgggctcg ccaaggtgtt
     1321 cgacgacctc ggttcccccg aaaaggccat ggagtatgcg ctcgaggcca atcggctcgg
     1381 cgcgcggccg ttcgaatggg gcggcgagac gcgctcgctc gaggagctgc aggaactcgc
     1441 ccggctcgac ggcttcagcc gcatgcggac gagcggccat cccagccggg cgccgctgtt
     1501 catcgtcggc atgccgcgct cggggacgac gctggtcgag gcgatcctgg cccggcaccc
     1561 cgaggtgctg gcgctgggag agtcgaacca gatccgcgat gccgaggtgg cggcttacct
     1621 gcggcggccg gtggcctcgc gcaatgtcgg ccgccagcag ctgatgctcg agctcgaccg
     1681 cgactggctg gcggcgcggg ccgaggagat ggccgggcgc tgggcggcgc gggcccgcgc
     1741 gccgttcgcg gtggcgaccg acaagctgcc cgagaacgcg gtgcggctcg ggctgatcaa
     1801 gcggctcttt cccaatgcgc gggtgatcca tgtgcggcgg cacccgctcg acaccggcgt
     1861 gtcgaacttt ttccagcgct tcgcggccgg gcagggctat tcgacccggc tggactggat
     1921 cggggcgcgg acgcggcagg tggccgattc gatggaaatc tggaagcggt cgctcgacct
     1981 gccgatcctc gacgtgagct acgagaggct ggtcgccgac ccggagccgc agtcgcggcg
     2041 gatcgtcgcc ttcgccgggc tcgcctggac ggatgcctgc ctcagccctg aacaggccac
     2101 ccacagcatc ctcaccgcca gccagtggca ggtgcgccag ccgatcaaca cggcatcggt
     2161 ggcgcgctgg caacgctacg cgccgtggct cgggccgatg atcgaggcca tgggcggcat
     2221 ggaatggatc gagacggagg tcgccgacat cgccgccagg ggctgacggg gcgacagctc
     2281 ccgtcaggcc agtgtcgcca gccgctcgaa cagcaggtcg tagaagccgt cggagtcgcc
     2341 cgagcgcaga taattggcgt tcttggcgcg gccggtgacg ccccaccagt cgaccacggt
     2401 catgccgcgg gtcaactcgc tggtggtctc gatcgcgacg ttgacgtgcc tgcccttgaa
     2461 caggtcgggc ttcagcagga aagcgatgac gcacggatcg tgcagcggtc cgccatccca
     2521 gccgtatttc tgctcgtcgt agcgctcgaa gaattccagc atttcggcgg tagcgacacc
     2581 ggtgcgattg ccaagcgcgc ggaagcgggc aacccgggtc ttggtcgaga gcatgaagtg
     2641 ggtgacgtcg agcggcacca cggtgatcgg gatgccggag tggaagacga cgtcggcggc
     2701 ctccgggtcg acgtagatgt tgaactcggc cgccggggtg atgttgccgc cctcgaacag
     2761 gccgccgccc atcagcacga tctcctggac ccgcggcatg atgtcgggtg ccttgacgaa
     2821 ggccatgccg aggttggtca gcgggccgag cgcgcagagc gtcaccgtgc cggccggctc
     2881 gcgacggagg gtatcgatga tgaagtcgac gccgtgctgc tcgcgcagct tgatcctggg
     2941 gtcgggcagg gtagggccat cgagcccggt cttgccgtgg acgtactcgg cggtcacgag
     3001 cttccgccgc attggccgct cgcatccggc gtagaccggg gtgtcggtcc gccccgacag
     3061 ctccacgacc ttcaacgcat tctgcgcgtt ctgggcgagc ccgacattgc cggcgaccgc
     3121 gacgacgccg aggacctcga tctcggccgg cgagcccagc gcgaggagga tggcgacggc
     3181 gtcgtcctgg cccgggtcgg tgtcgataat gatcttgcgg cgcatggggg ttggccttct
     3241 tggttcgcgc gttgagtcag cgcggagcat aatgcggcgg cgccggctgc gacagcggaa
     3301 cagttggggc cgccggcgcg ttcaagcgcg gagggaatcc gcttgcgtca gccacacacc
     3361 atccgccgtt ccgccaggct cgaccgggat ctggc
//
LOCUS       DATAZA010000283         2615 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_957706, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000283 DATAZA010000000
VERSION     DATAZA010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2615
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_957706"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            168..1670
                     /gene="istA"
                     /locus_tag="VHZ56_07195"
     CDS             168..1670
                     /gene="istA"
                     /locus_tag="VHZ56_07195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032488953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEX4297791.1"
                     /translation="MESRHHHSQSVAAAKGGFSERTGRRIETEQRRPSPPPVDRRRAR
                     KTADPFQGLWDSEIRLMLEAEPGLRAVTLLEEMQRRHPDHDWDRLRRSLERRVRAWSA
                     EHGAERAVIFRQDHIPGQQGLSDFTDMGDVAVSIAGQPFDHRLYHFVLAYSAWEHAEP
                     VLGGESFTALAVGLQNALWALGGVPAEHRSDSLSAAFRNLDDDTCRDQTRRDQAFCAH
                     YGMTPTRNTTGVAHENGAVESQHGHLKRAIAQALLLRGSRDFESLDAYRAWIADLIGR
                     RNARRAKMVRLECAALSELPPQRTSDYDEATVFVTSSSGFVLRKVFYTVPSRLISFRL
                     RVRLYDDRLECFHGASSPVLTLRRGRSYGDGRRGHIVDYRHVIHSLRRKPMALLNLVY
                     RDALFPRPAYRLVWERLMAAGDARTACRTMVALLALAHECGCEAELAAALTEQMRPEP
                     EDASVTAFTIDVSALRARFAPIPTLMPEIVVNLPLITGYDALLPSMRVAA"
     gene            1667..2488
                     /gene="istB"
                     /locus_tag="VHZ56_07200"
     CDS             1667..2488
                     /gene="istB"
                     /locus_tag="VHZ56_07200"
                     /inference="COORDINATES: protein motif:HMM:NF006038.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HEX4297792.1"
                     /translation="MNDSISDTIKVDTARLPLLLNELRLPTMAALWPDFTERADREAW
                     PAARLLATLPELELAERSQRRIQRHLTEARLPPDKTLDNIDFTALPMLSRAHVTALAS
                     GDGWISTGGTILLFGPSGSGKSHLAAAFGHTLVENGYRVLFTRTTDLVQRLQQARQAL
                     ALESAIEKLDKYHLLILDDLCYVRKDQAETSVLFELIAARYERRSLMVTANHPFGEWT
                     TVFPDAAMTLAAVDRLVHHSTIFEMNVESYRRRAAIARTTRKPKTISDIKRDTDG"
BASE COUNT          481 a          892 c          786 g          456 t
ORIGIN      
        1 ctgtcgcgcg acagcacgga tggccggtca gcgacacgat cggcgacgtg gattttgaac
       61 ctgtctgccg gccgcagcgc gtgcgggcaa tatcggcgcc tcgatgatcg aggcgaggaa
      121 ccgaagtgcc cgggcgacac gtcacgcgtc agcagaagag gcttttcatg gaatcccgtc
      181 atcaccattc ccaatccgtt gccgcggcaa agggcggctt cagcgaacga accggacgcc
      241 gcatcgagac ggaacagcgt cgaccgtcac cgccgcctgt tgatcggcgt cgggcgcgca
      301 agaccgccga tccgttccag gggctgtggg acagcgagat ccgtctcatg ctcgaggccg
      361 agccaggtct gcgggccgtc actttgctgg aagagatgca gcgccgtcat cccgatcacg
      421 actgggaccg tctgcgccgg agcctggagc ggcgggtgcg ggcctggtcg gcggagcatg
      481 gcgccgagcg cgcggtgatc ttccggcaag accacatccc tgggcagcag ggtctctccg
      541 acttcaccga catgggcgat gtcgcggtca gcatcgccgg tcagcccttc gatcaccggc
      601 tctaccactt cgttctcgcc tattccgcct gggagcatgc cgagcccgtg ctcggaggcg
      661 agagtttcac ggccctggcc gtcggtcttc agaacgcctt atgggctttg ggcggcgttc
      721 cggcggaaca tcggtccgat agtctgtcag ccgccttccg caatctcgat gacgacacct
      781 gccgcgatca gacacgccgc gatcaggctt tctgcgccca ttacggcatg acgccgaccc
      841 gcaacaccac cggagtggcg catgagaacg gcgccgtcga gagccagcat ggccacctca
      901 agcgggccat cgctcaggcg ctgttgttgc ggggcagccg cgacttcgag agcctggacg
      961 cgtatcgcgc ctggatcgct gacctcatcg gccgccgcaa cgcacgccgt gccaagatgg
     1021 tgcggctgga atgcgcggct ttgagtgagc tgccgcccca acgtacctcg gattatgacg
     1081 aggcgacggt tttcgtgacc tccagcagcg gcttcgttct gcgcaaggtc ttctacaccg
     1141 taccgtcgcg gctgatcagc ttccggctgc gggtccggct gtacgatgat cggctggaat
     1201 gcttccacgg cgccagcagc ccggtgctga cgctgcgccg gggccgcagc tacggtgatg
     1261 ggcggcgtgg tcacatcgtc gactaccgtc atgtcatcca cagcctgcgc cgcaagccga
     1321 tggcgttgct taacctcgtc tatcgcgacg cgctgttccc acgcccggcc taccgactag
     1381 tgtgggagag gctgatggcc gcgggcgacg cgcgaactgc ctgtaggacc atggtggccc
     1441 ttctcgccct cgcgcatgaa tgcggctgcg aggccgaact cgccgccgcg ctcactgaac
     1501 agatgcgacc ggagccggaa gacgcctcgg tcaccgcctt taccatcgat gtgtcggcgt
     1561 tgcgggcccg cttcgcaccg atacccacgt taatgcccga gatcgtggtc aacctgcccc
     1621 tgatcaccgg ctatgacgcg ttgctccctt ccatgagggt cgcggcatga acgacagcat
     1681 cagcgacacg atcaaggtcg ataccgcccg gctgcccctg ctgctgaacg agttgcggct
     1741 gccgacgatg gccgccctct ggcccgactt caccgagcgg gccgatcggg aagcttggcc
     1801 cgcagcacgg ctcttggcga ctttgcccga actcgaactc gccgaacggt ctcagcgacg
     1861 catccagcga cacctgactg aggcccggct gccaccggac aagaccttgg acaacatcga
     1921 cttcacggcc ctgcccatgc tcagccgagc gcacgtcacg gccttggcca gcggtgacgg
     1981 ttggatcagc accggcggga cgatcctcct ctttgggccg agcggctcag gaaaatcgca
     2041 tctcgccgcc gccttcggcc acaccctggt cgagaatgga taccgcgtcc tctttacacg
     2101 aaccacggat ctcgtgcagc ggctgcagca ggcgcgccag gccttggcgc tcgaaagtgc
     2161 gatcgagaag ctggacaaat atcacctgct gatcctcgac gacctctgct acgtccgcaa
     2221 agatcaagca gaaacctcgg tgttattcga gctcatcgcc gcccgctacg agcggcgcag
     2281 cctcatggtt accgccaatc accccttcgg ggaatggacg accgtttttc ctgacgccgc
     2341 catgacacta gctgctgtcg atcgcctcgt tcaccactcc acgatcttcg aaatgaatgt
     2401 cgaaagctat agacgcagag ccgctatcgc tcgcacaaca cgaaagccca aaacaatcag
     2461 cgacatcaag cgcgacaccg acggctagcc ggcacctctc cggcgacacg accaacgaca
     2521 cccaacttct acccttgtgt cgaggcaata gaaaagtcat cttcagaaca cgcagcgacc
     2581 ggccatcttc gtgtcgctag ccggccatca atcct
//
LOCUS       DATAZA010000284         3203 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3280268, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000284 DATAZA010000000
VERSION     DATAZA010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3203
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3280268"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..195
                     /locus_tag="VHZ56_07205"
     CDS             <1..195
                     /locus_tag="VHZ56_07205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297793.1"
                     /translation="ARQGLLDGKLRFRPLMIPDRFTEQSNQAEMYAAAGLDRAGIVKT
                     VLATLQSADSSAVRAGDLTP"
     gene            complement(211..498)
                     /locus_tag="VHZ56_07210"
     CDS             complement(211..498)
                     /locus_tag="VHZ56_07210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018327905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2312 domain-containing protein"
                     /protein_id="HEX4297794.1"
                     /translation="MAKPTVSSDSVAQDQIRAFIERIERMEEEKKAISDDIKEIYAEA
                     KGNGFDTKVLRQVVRIRKQDHSERLEQEALLDLYLAALGMQNAPREDDEDE"
     gene            700..1272
                     /locus_tag="VHZ56_07215"
     CDS             700..1272
                     /locus_tag="VHZ56_07215"
                     /inference="COORDINATES: protein motif:HMM:NF018037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1036 domain-containing protein"
                     /protein_id="HEX4297795.1"
                     /translation="MNSGFRVHPIRLALMLAGLALAGMLATAGPALADLRICNQSTNQ
                     VSIALGYRADKGWQSEGWWVAPSGKCAVVYQGDLHSRYFYLYVADDIGGGAWDGQNFM
                     CTRDETFTIFGVEDCLARGYERTGFFEVDTQNRPDWTLQLTDAANNDTSSAPATDDGN
                     DDTTSAAPDDGTDQGTDAGQGAADAGGGDD"
     gene            1306..2742
                     /gene="pyk"
                     /locus_tag="VHZ56_07220"
     CDS             1306..2742
                     /gene="pyk"
                     /locus_tag="VHZ56_07220"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEX4297796.1"
                     /translation="MRRMRRVKIIATLGPASNSEKVIEELARAGADVFRINMSHASHD
                     LMRDTVAKIRSVEKLLSHPLGILVDLQGPKLRVGKFAEGSVQLVAGARFNLDSSDTPG
                     TVERVYLPHPEIIESVSVGDRLLLDDGKLQLKATRVGGGTIETEIVYGGKLSDKKGVS
                     LPDTLLPVGALTEKDHEDLLAGLAAEADWIALSFVQRPEDIIDVRKIVQGRAGVMAKI
                     EKPQAVERLEEIIKLCDAFMIARGDLGVEMPLEQVPGLQKRMIRIARRFGKPVVVATQ
                     MLESMITSPVPTRAEVSDVSIAVFEGADAIMLSAESASGQYPIEAVAMMNKVAMAVET
                     DVNYRGIIRAQAAEPEATAADAISAATRQVAETLDLASIVTYTSSGSTAIRAARERPS
                     KPILALSPNPRTVRRLSVVWGVHCVYSEDAVNLDDMVDRACIIAYQEGLARPGDRIAI
                     TAGIPLGTPGATNMLRIAFVRQDGAGSS"
     gene            complement(2749..>3203)
                     /locus_tag="VHZ56_07225"
     CDS             complement(2749..>3203)
                     /locus_tag="VHZ56_07225"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HEX4297797.1"
                     /translation="DEFGRLCEEARAFGATIGFEFMASAMIHRLDDCLAMVEGAAAPN
                     GGLIVDLAHVMAIGIPFEAVSRIPLRYLVNVELNDNLLPGSPSYDPGQRRFCGEGDFD
                     IRGFIAAVRKTGYAGPWAVEVFADALVALTPEELDRRAHDTTRRMFMG"
BASE COUNT          560 a         1128 c         1001 g          514 t
ORIGIN      
        1 gcgcgacagg gcttgctcga cggcaagctg cgattccgcc cgctgatgat ccccgatcgc
       61 ttcactgagc agtcgaacca ggccgagatg tatgccgccg ccggcctcga ccgcgccggc
      121 atcgtcaaga cggtgctcgc caccctgcaa tcggccgaca gttccgccgt ccgcgccggc
      181 gacctgacgc cttagggctg gagcgccgtc ctactcgtcc tcgtcgtcct cccgcggcgc
      241 attctgcatg ccgagggccg cgaggtagag atcgagcagg gcttcctgtt cgagccgttc
      301 ggagtgatcc tgcttgcgga tgcgcaccac ctgccgcaac actttcgtat cgaagccatt
      361 gcccttggct tcggcgtaga tttccttgat gtcgtcggaa atcgccttct tttcctcctc
      421 catgcgctcg atgcgctcga tgaaggcgcg gatctggtcc tgcgccacgc tgtcggacga
      481 aacggtcggt ttggccatga aagagcactc ctgcaactgg ccgtcgttga accgtcaaac
      541 cccggcccgt tcaagcgcaa accgcagcaa ttcacataac ccacagcccg cggtttcgcg
      601 tcgccggccg tgcggcaggc gcaggcccgc aattccgcca aaaccacaga ttagccgttg
      661 acaggccgca ttgtgccgcg ctcaaacagg gcatcttcca tgaattctgg cttccgcgtg
      721 caccccatcc gcctcgcgct catgcttgcc ggcctggcgc tggcagggat gctggcgacg
      781 gccggtcccg cgctcgccga cctgcgcatc tgcaaccagt cgaccaacca ggtatcgatc
      841 gcgctcggct atcgcgccga caagggctgg cagtccgaag gctggtgggt ggccccatcc
      901 ggtaaatgcg cggtcgtcta ccagggtgac ctccactccc gatattttta cctctacgtc
      961 gcggacgata tcggcggggg cgcatgggac ggccagaact tcatgtgcac ccgcgacgag
     1021 accttcacca tcttcggtgt cgaggactgc ctcgcccgtg gctacgagcg caccggcttc
     1081 ttcgaggtcg acacgcagaa tcgccccgac tggacgttgc agttgaccga tgccgccaat
     1141 aacgacacaa gctccgctcc ggcgaccgac gacggcaacg acgacaccac cagcgccgcg
     1201 ccggacgacg gcaccgacca gggaaccgac gccgggcagg gtgcagccga tgctggcggc
     1261 ggcgatgact agtgcagttc cggaactcgc gggggcgatg acgacatgag acgcatgcga
     1321 cgggtaaaga tcatcgccac gcttggcccc gcctccaaca gcgagaaggt gatcgaggaa
     1381 ctggcgcgcg ccggtgcgga tgtcttccgc atcaacatga gccacgccag ccacgacctc
     1441 atgcgcgaca ccgtcgccaa gatccgcagc gtcgagaagc tcctgagcca tccgctgggc
     1501 attctggtcg acctgcaggg tcccaagctg cgggtcggca agttcgccga gggctccgtg
     1561 cagcttgtcg ccggcgccag gttcaatctc gacagctcgg acacgcccgg cacggtggag
     1621 cgggtctacc tgcctcatcc cgagatcatc gagagcgtct cggtcggcga ccggctgctg
     1681 ctcgacgacg gcaagctgca gctcaaggcg acgcgcgtcg gtggtggcac catcgagacc
     1741 gagatcgtct atggtggcaa gctcagcgac aagaagggcg tcagcctgcc cgatacgctg
     1801 ctgccggtgg gcgcgctgac cgagaaggac cacgaggacc tgctggccgg cctcgccgcc
     1861 gaagccgact ggatcgcgct gagcttcgtg cagcgccccg aggacatcat cgacgttcgc
     1921 aagatcgtcc agggccgggc cggcgtcatg gccaagatcg agaagccgca ggcggtggag
     1981 cggctcgagg aaatcatcaa gctctgcgat gccttcatga tcgctcgcgg cgaccttggc
     2041 gtggaaatgc cgctcgagca ggttcccggc ctgcagaagc ggatgatccg catcgcccgc
     2101 cggttcggca agcccgtggt ggtcgccacc cagatgctgg agagcatgat cacctcgccg
     2161 gtgccgaccc gcgccgaggt gtccgacgtc tcgatcgccg tgttcgaggg cgccgacgcc
     2221 atcatgctca gcgccgagag cgcctcgggc cagtacccga tcgaagccgt ggcgatgatg
     2281 aacaaggtgg cgatggcggt cgaaaccgac gtcaattacc gcggcatcat ccgcgcccag
     2341 gccgccgagc ccgaggcgac ggcggccgac gccatctccg cggcgacccg gcaggtggcc
     2401 gaaacgctcg acctggcgtc gatcgtcacc tacacgtcct cgggctccac cgcgatccgt
     2461 gccgcccgcg agcggccgag caagccgatc ctcgcgctct cccccaaccc gcgcacggtc
     2521 cgccgtttgt cggtcgtctg gggcgtccac tgcgtctatt ccgaggatgc ggtgaacctc
     2581 gacgacatgg tcgatcgtgc ctgcatcatc gcgtaccagg agggcctcgc gcgcccgggc
     2641 gaccgcatcg cgatcaccgc cggcatcccg ctgggcacgc ccggcgcaac caatatgttg
     2701 cgcattgcct tcgtccgcca ggacggcgcc ggcagcagct gaacgcgttc agcccatgaa
     2761 catccgtctg gtggtatcgt gggcccgccg gtcgagctct tccggcgtca acgcgacgag
     2821 ggcgtcggcg aacacctcga cggcccacgg acccgcatag ccggttttgc gcaccgcggc
     2881 gatgaacccc ctgatgtcga aatcgccctc gccgcagaac cggcgctgcc ccggatcgta
     2941 gctcggactg cccggcagca gattgtcgtt gagctcgacg ttcacaaggt agcgcagcgg
     3001 gatccggctc accgcctcga atggaatgcc gatcgccatg acatgcgcga gatcgacgat
     3061 cagcccgccg ttcggggccg ccgcgccctc caccatcgcg agacaatcgt ccagccgatg
     3121 gatcatcgcc gacgccatga actcgaaccc gatggtcgcg ccaaacgccc tcgcctcctc
     3181 gcacagccgg ccgaactcgt cga
//
LOCUS       DATAZA010000285         9652 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1422884, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000285 DATAZA010000000
VERSION     DATAZA010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 9652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9652
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1422884"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..480
                     /locus_tag="VHZ56_07230"
     CDS             <1..480
                     /locus_tag="VHZ56_07230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylenolpyruvoylglucosamine reductase"
                     /protein_id="HEX4297798.1"
                     /translation="IVTLANADMGYLYRKSNGPRGAVFVSAVYQGFAGEPQKILDEMR
                     TVTERRESSQPTRAKTAGSTFKNPDGQSSWKLIDEAGGRGFSFGRAMMSDLHSNFLIN
                     TGEADAYEVETVGEAIRQKVRGTHGIELRWEVRRMGRFVAGREVREFLDGAPFTGMV"
     gene            477..1400
                     /locus_tag="VHZ56_07235"
     CDS             477..1400
                     /locus_tag="VHZ56_07235"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018208065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEX4297799.1"
                     /translation="MMAKHVAVLMGGISNEREVSLHSGSGCAAALRKAGYAVTEIDVG
                     YDIAERLREVKPDVAFNALHGRYGEDGTIQGVLEYLRIPYTHSGVLASALAMDKHQAK
                     IMFKAAGIPVTDHVVASRAEVGRAHVMAPPYVVKPVADGSSNGIFIVKADQSHPPQEI
                     LGADWKGGEVLMVERYIPGRELTCAVMGDVALGVTEIVTDLAFYNYEAKYTAGGSRHI
                     VPADIQPKIYDKVQKMALKAHAALGCRGVSRTDFRFNDRAGGEGELVCLEINTQPGMT
                     ETSLAPEQARHAGHSFEELVSWMVEDASCNR"
     gene            1388..2350
                     /locus_tag="VHZ56_07240"
     CDS             1388..2350
                     /locus_tag="VHZ56_07240"
                     /inference="COORDINATES: protein motif:HMM:NF015739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HEX4297800.1"
                     /translation="MQQVGARGFAAAQLVDPRQLPVPLPAFPLRGRFDFGRAWVLHKK
                     LMLRAAAAGIVIVVVAGLYEARDDVGALGQRGYALAQTQIARAGFGISTINITGQTLT
                     GEATILRALAIAPDTTTLSYDADAALQRLGQIPTIKSANIRKVYPNGLAVTVVEKVPA
                     ARWRIGDKTYVVDEDGSPVAVDDGSFKSLPLVVGEGAAAEAMVMIHALNAYPALTEDL
                     AALSRIGDRRWDLIFYSGLRVELPENGVAQALQQLDMYQREDQLLDRDLQVVDMRVPG
                     MLSLKLGDLANQAWATFKKQNKHVTTGDSEYETAAERASGTKAQ"
     gene            2347..3660
                     /gene="ftsA"
                     /locus_tag="VHZ56_07245"
     CDS             2347..3660
                     /gene="ftsA"
                     /locus_tag="VHZ56_07245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEX4297801.1"
                     /translation="MMTETMTARLRPVQAGKTTLISVLDIGSTKMCCVIARLAPRPEG
                     KSLKGRTHVAEVIGFGYGPSAGIKSGVITDLDQAEQAIRTVVGMAERAAGLTVQSVVV
                     NVTAGRLGSETFSATVNLGAQEVEKADVQRVLRAVNQRSVRPERSIIHALPIGYALDG
                     QRGVQDPRGLVGEKLSVDVAVISAETLAMRNIELVLNRCHLQIEALMATPYASGVATL
                     VDDEGQLGVCCVDFGGATTTVAVFADGHPVYADAIAIGGHHLTLDIARQLSVSVADAE
                     RLKTVYGSVIPGQADEREMISVVPVGAGADEAPGMIPRSHLTRILRPRVEEILTAVRD
                     RMQATGMMDVCGRRFVMTGGGSELTGMPEVARRLLGRNVRNGRPMGISGLPEMGRGAA
                     FATVAGMLIYPQVCAQEFAEPRQAAKLTGTDGYFARVGNWLKTSF"
     gene            3831..5453
                     /gene="ftsZ"
                     /locus_tag="VHZ56_07250"
     CDS             3831..5453
                     /gene="ftsZ"
                     /locus_tag="VHZ56_07250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEX4297802.1"
                     /translation="MTINLAIPDIQELKPRITVFGVGGAGGNAVNNMIISGLDGVDFV
                     CANTDAQALALSKSQRIIQLGVSVTEGLGAGSHPEVGRAAAEESFDEINDHLSGSHMV
                     FITAGMGGGTGTGAAPVIARAAREQGILTVGVVTKPFTFEGNRRARLAEDGIDELHRH
                     VDTLIVIPNQNLFRVANEKTTFADAFKMADDVLHSGVRGVTDLMVKEGLINLDFADVR
                     AVMRGMGKAMMGTGEAEGEDRARHAAEAAIANPLLDDVSMQGARGLLISITGGPDLTL
                     YEVDEAASRIREEVDSEANIILGATYDPDMSGRIRVAVVATGTDATMVQALEPMKAST
                     TRAPLTAIRRPMDQPAPQPQPQQFEADVRQAVAEAITYGEPQHETYAGDDGVTVEPYI
                     PSAALDHLDEPARVSEAPIPTAYVPSHAERPDLQRRMPRTEEFPAVARKTLVAEERHD
                     NEPRNARALFKRLASNVGIGLRTPQHPGLDETPYSGAEDAAARSAIEAGQARNAGLSA
                     PPEGAAGRLDAQGRPLPHKEHIEIPSFLRKHG"
     gene            5555..6511
                     /gene="lpxC"
                     /locus_tag="VHZ56_07255"
     CDS             5555..6511
                     /gene="lpxC"
                     /locus_tag="VHZ56_07255"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: protein motif:HMM:TIGR00325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEX4297803.1"
                     /translation="MQNLSARQRTVGGVLEFSGFGVHSGLPVTLLIEPAPADSGYKIQ
                     RRLDDGAMVGPVSVHFARVTRTTLCTTIDLGDSVSVATVEHVISALSGLGVDNALLTV
                     TGPECPIIDGSAAPFAEGIMRVGLEIQSKSRRYIKIMRQVLVRNNEASAALEPYNGRL
                     LDLEIDFDSKVIGRQRMIFDWTPRKYFTDVSRARTFGFVRDAKILRQAGYALGSSLDN
                     SITVHEDRILNPGGLRYEDEFVRHKLLDAIGDLALCGLPIYGRFRSYKGGHALNALVL
                     HGLFASEANYQVVNAEDLPLGYDALNDMPEGLEVRPYLRSVG"
     gene            6651..7502
                     /locus_tag="VHZ56_07260"
     CDS             6651..7502
                     /locus_tag="VHZ56_07260"
                     /inference="COORDINATES: protein motif:HMM:TIGR03302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEX4297804.1"
                     /translation="MAAFAGFLGACSMFGQTKITEQPIVPPETLYQNALTDMDNQRYV
                     TAVTQLKQLEQQHPYSDLNEKAKLMEVYANYRMGKFDDAVLAADRYTAQFPTSDQTAY
                     VLFLKGTAYFAQMTDITRDQGFAQQAIDTYTLLINNYPQSDYAKDARDKMVVAYDQLA
                     GKEMSVGRYYEGNGQYAAAINRFRAVVDKYQTSSHIEEALFRLTECNLSLGLTSEAQT
                     AAAVLGHNYPSSDWYKEAYDLLQKQGLEPKLNAQSTLATAITQPSVSVSSAGDGKIDT
                     QVPAPKI"
     gene            7594..9264
                     /gene="recN"
                     /locus_tag="VHZ56_07265"
     CDS             7594..9264
                     /gene="recN"
                     /locus_tag="VHZ56_07265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HEX4297805.1"
                     /translation="MLSAISVRNIVLIDQLDIGLEGGLTALTGETGAGKSILLDALTL
                     ALGGRGDASLVRNGAESGQVVAVLQLPAEHPARVALRDNEIADDAELIMRRVQYADGR
                     TRAFINDQPVGAGLMQAIGRRLVEIHGQHDDRALVDAAVHRGLLDAFGGLSGDAGATA
                     AAHGALAATAAEVAAQRQVIAEAAAREDYARHVVEELAQLNPESGEEEALAERRTRLM
                     QLEKAADEVRDADEILGGPAAPGPALAGLMRRLARKVDGGMGVFQPLVDAIEGTLNAL
                     DRTEEAVETLKREMAFDPAELEQVEGRLFALRAMARKHHVLADELGAVLRKYRDELEA
                     LQSGEANLARLEAAETAAREVYLKAARRLSAARAKAAKALSKAVEAELPDLKLGTARF
                     IVDQQVDETRVAATGFDQVAFQVQTNPGTLPGPLMKVASGGELSRFLLALKVVLADRG
                     SAPVLIFDEIDTGVGGAVADAIGRRLKRLSERVQVLTVTHAPQVAARSDMHLFIEKQA
                     IEEGAFVRTHVRRLDGAARREEIARMLAGATITAEARAAAGKLLSDVA"
     gene            9261..>9652
                     /locus_tag="VHZ56_07270"
     CDS             9261..>9652
                     /locus_tag="VHZ56_07270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019859080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEX4297806.1"
                     /translation="MTDTRDVESYSEDEARAELERLHEVLGKADIAYHQNDAPTITDA
                     AYDGLKRRYLALESAFPELRRPDSLSGKVGAPAADGFAKVRHEVPMLSLAKAYTEQDV
                     IDFAERARRFFERDKDLELVFTAEPKIDG"
BASE COUNT         1629 a         3195 c         3377 g         1451 t
ORIGIN      
        1 atcgtcaccc tcgccaatgc cgacatgggc tatctctacc gcaagtcgaa cgggccgcgc
       61 ggcgcggtgt tcgtctcggc ggtgtaccag ggctttgccg gcgagccgca gaagatcctc
      121 gacgagatgc ggacggtcac cgaacggcgc gagagctcgc agccgacgcg ggccaagacc
      181 gccgggtcga ccttcaagaa cccggatggg caatcgagct ggaagctgat cgacgaagcc
      241 ggcggccgcg gcttcagctt cggtcgcgcc atgatgtcgg acctgcactc caacttcctc
      301 atcaacaccg gcgaggccga cgcctacgag gtcgagacgg tgggcgaggc gatccgccag
      361 aaggtgcgcg gcacccacgg catcgagctg cgctgggaag tgcgccgcat gggtcggttc
      421 gtcgccggcc gcgaggtgcg cgagttcctc gacggcgcgc cgttcacggg aatggtgtga
      481 tggcaaagca cgtcgcggtc ctcatgggcg gcatttccaa cgagcgcgag gtgtcgctgc
      541 actcgggcag cggttgcgcc gcggcgctgc gcaaggccgg ctacgccgtc accgagatcg
      601 atgtcggcta cgacatcgcc gagcggctgc gggaagtgaa gccggacgtg gcgttcaacg
      661 cactccacgg ccgctatggc gaggacggca ccatccaggg ggtgctcgag tacctgcgca
      721 tcccttacac gcattcgggc gtgctcgcct cggcgctggc gatggacaag caccaggcca
      781 agatcatgtt caaggcggcc ggcatcccgg tcaccgacca tgtcgtcgcg tcccgtgccg
      841 aagtcggccg ggcccacgtg atggcgccgc cctacgtcgt caagccggtg gccgacggct
      901 cgtcgaacgg catcttcatc gtcaaggccg accagtcgca cccgccgcag gaaatcctcg
      961 gcgccgactg gaagggcggc gaggtgctga tggtcgagcg ctacatcccc ggccgcgaac
     1021 tcacctgcgc ggtgatgggc gacgtggcgc tgggcgtaac ggagattgtc accgatctcg
     1081 ccttctacaa ctacgaggcg aagtacacgg cgggcggctc gcgccacatc gtgccggccg
     1141 acattcaacc gaaaatttac gacaaagtgc agaagatggc cctcaaggcg catgcggcgc
     1201 ttgggtgccg gggcgtgtcg cggacggatt tccgtttcaa cgaccgggca ggcggggagg
     1261 gcgagctcgt ctgcctcgag atcaacaccc agccgggcat gaccgagact tcgctggctc
     1321 ccgagcaggc ccgtcacgcc ggccattcgt tcgaggagct ggtcagctgg atggtggagg
     1381 acgcgagttg caacaggtag gcgcaagggg cttcgccgcc gcccagctcg tcgatccgcg
     1441 ccagctgccg gtgccgctgc cggcctttcc gctgcgcggg cggttcgatt tcggccgcgc
     1501 ctgggtgctg cacaagaagc tgatgctgcg ggccgccgcc gccggcatag tgattgtcgt
     1561 cgtggccggt ctctacgagg cgcgcgacga tgtcggcgcg ctcgggcagc gcggctatgc
     1621 cctggcgcaa acgcagatcg cgcgcgccgg cttcggcatt tccaccatca acatcaccgg
     1681 ccagacgctg accggcgaag cgacgatcct gcgggcgctc gccatcgccc ccgacacgac
     1741 gacgctcagc tacgacgccg atgcggcact gcagcggctc ggccagattc caaccatcaa
     1801 gtcggccaat atccgcaagg tctatccgaa cgggctggcg gtgacggtgg tcgagaaggt
     1861 gccggcggcg cgctggcgca tcggcgacaa gacctatgtg gtcgacgagg acggcagtcc
     1921 ggtggcggtc gacgacggca gtttcaaatc gctgccgctg gtggtgggcg agggcgccgc
     1981 ggcagaggcc atggtgatga tccacgcgct caacgcctat ccggccctca ccgaggatct
     2041 cgcggcgctg agccgcatcg gcgaccggcg gtgggacctg atcttctatt ccggcctgcg
     2101 ggtggagctg cccgagaacg gcgtcgcgca ggcgctgcag cagctcgaca tgtaccagcg
     2161 cgaggaccag ttgctcgatc gcgacctcca ggtcgtcgac atgcgggtgc ccggcatgct
     2221 gtcgctgaag ctcggcgacc tcgcgaacca ggcctgggcg acgttcaaga agcagaacaa
     2281 gcacgtcacc acgggtgact ccgagtacga gaccgcggcc gagcgcgcgt cggggaccaa
     2341 ggcgcaatga tgaccgagac gatgaccgcg cggctgcgcc cggtgcaggc cggcaagacg
     2401 acgctgattt cggtgctcga catcggctcg accaagatgt gctgcgtcat cgcgcggctc
     2461 gcaccgcgtc ccgaaggcaa gtcgctgaag ggccgcacgc acgtcgccga ggtcatcggc
     2521 ttcggctacg gcccgtcggc ggggatcaag agcggcgtca tcaccgatct cgaccaggcc
     2581 gagcaggcga tccggacggt cgtcggcatg gccgagcggg ccgccgggct gacggtgcag
     2641 tcggtggtgg tcaacgtcac cgccgggcgg ctcggctccg agacgttctc ggccaccgtg
     2701 aacctcggcg cgcaggaggt cgagaaggcc gacgtgcagc gcgtgctgcg ggcggtcaac
     2761 cagcgcagcg tccggcccga gcgctcgatc atccacgcgc tgccgatcgg ctacgcgctc
     2821 gatggccagc gcggcgtgca ggatccgcgc ggcctggtgg gtgaaaagct cagcgtcgat
     2881 gtggcggtga tcagcgccga gacgctggcg atgcgcaaca tcgagctggt gctcaaccgc
     2941 tgccacctgc agatcgaggc gctgatggcg acgccctatg cctccggggt cgcgacgctg
     3001 gtcgacgacg aaggccagct gggcgtgtgc tgcgtcgatt tcggcggtgc taccactacg
     3061 gtcgccgtgt ttgccgacgg ccacccggtc tatgccgacg cgatcgccat cggcggccac
     3121 cacctgacgc tcgacatcgc gcgccaactc tcggtctcgg tcgccgacgc cgaacggctg
     3181 aagacggtct atggcagcgt gattcccggg caggccgacg agcgcgagat gatctcggta
     3241 gtgccggtcg gcgccggcgc cgacgaagcg ccggggatga ttccacgctc gcacctgacc
     3301 cgcatcctcc gcccgcgcgt cgaggagatc ctgaccgcag tgcgcgaccg gatgcaggca
     3361 accgggatga tggatgtctg cgggcgccgg ttcgtcatga ccggcggcgg cagcgaactc
     3421 accgggatgc ccgaggtggc ccggcgcctg ctcgggcgga acgtgcgcaa cggccggccg
     3481 atgggcatat cgggcctgcc cgagatgggc cgcggcgccg ccttcgccac ggtggccggc
     3541 atgctgatct atccgcaggt ctgcgcgcag gaattcgccg agccgcggca ggccgccaag
     3601 ctcacgggca ccgacggcta cttcgcccgc gtcggaaact ggctcaagac ctcgttctag
     3661 ccgcgagtcc gggccggcca tcggaaatca tggttaacgg caggtaaatt ccggcttttc
     3721 cggccctcgc aatttgcatg ccgcgttaac ggattggcac ggattgttag ggtccggtta
     3781 acgaattggc gactaacaat gccctcatcc gccaatccat ggggccctcc atgaccatca
     3841 atctcgccat ccccgacatt caggaactga agccgcgcat caccgtgttc ggtgtcgggg
     3901 gcgctggcgg aaacgccgtc aacaacatga tcatctcggg gctcgacggc gtcgacttcg
     3961 tgtgcgccaa caccgacgcg caggcgctgg cgctgagcaa gtcgcagcgc atcatccagc
     4021 tcggggtgtc ggtcaccgag gggctcggcg ccggctcgca ccccgaagtc gggcgggcgg
     4081 cagcggaaga gagtttcgac gagatcaacg accacctcag cggctcgcac atggtgttca
     4141 tcaccgccgg catgggcggc ggcaccggca ccggcgcggc gccggtcatt gcgcgggcgg
     4201 cccgcgagca gggcatcctg accgtcggcg tcgtcaccaa gccgttcacc ttcgagggca
     4261 atcgccgggc ccgcctggcc gaggacggca tcgacgagct gcaccggcac gtcgacacgc
     4321 tgatcgtcat cccgaaccag aacctgttcc gcgtcgccaa cgaaaagacg acgttcgccg
     4381 acgccttcaa gatggccgac gacgtgctgc attcgggggt gcgcggcgtc accgacctga
     4441 tggtcaagga aggcctgatc aacctcgact tcgccgacgt gcgcgccgtc atgcgcggca
     4501 tgggcaaggc gatgatgggc accggcgagg ccgagggcga ggatcgcgcc cggcatgcgg
     4561 cggaggcagc gatcgccaac ccgctgctcg acgacgtgtc gatgcagggg gcccgcggcc
     4621 tgctgatctc gatcaccggc ggcccggacc tgaccctcta tgaagtcgac gaggcggcga
     4681 gccgcatccg cgaggaagtc gactcggaag ccaacatcat tctcggcgcg acctacgatc
     4741 cggacatgtc cggtcgcatc cgcgtcgcgg tcgtggcgac cggtaccgat gcgacgatgg
     4801 tgcaggcgct ggagccgatg aaggccagca cgacgcgcgc gccgctgacc gcgatccgcc
     4861 gcccgatgga ccagccggcc ccgcagcccc agccgcagca gttcgaggcc gacgtccggc
     4921 aggcagtggc cgaggcgatc acctacgggg aaccgcagca tgagacctac gccggcgacg
     4981 acggagtgac cgtcgagccc tatatcccga gcgccgcact cgaccacctg gacgagccgg
     5041 cgcgggtgtc ggaggcgccg atcccgaccg cctatgtgcc gtcgcacgcc gagcggccgg
     5101 acctgcagcg gcgcatgccc cgcacggagg aatttcccgc tgttgcgcgg aagacactgg
     5161 tggccgaaga acgtcacgac aatgagccgc gaaatgcgcg ggctttgttc aagcggctcg
     5221 cttccaatgt cgggatcggg ctgcggacgc cgcagcatcc gggcctcgac gagaccccgt
     5281 attcgggtgc cgaggacgcc gctgcgcgta gcgcgatcga ggccggacag gcccggaatg
     5341 cgggactttc cgcgccgccg gagggcgccg cgggccggct cgatgcacag ggccggccgc
     5401 tcccccacaa ggagcatatc gagattccgt ccttcctccg gaagcacggc tgagggccgt
     5461 tgaaaacggc tgttgcaacc gcggccggcg cgcttccgcg ccggtttctt tttggttaag
     5521 agtcgaactg gtcgtggggt cggagacgtt gttgatgcag aacctgtcgg cgcgccagcg
     5581 caccgttggc ggtgtgctcg agttcagcgg ttttggcgtc cattccggct tgccggtgac
     5641 gctgctgatc gaaccggctc cggccgatag cggctacaag attcagcgcc ggctcgacga
     5701 tggtgcgatg gtcggcccgg tatcagtgca cttcgcgcgc gtcacccgca ccacgctgtg
     5761 caccaccatc gatctcggcg acagcgtatc ggtggcaacg gtagagcatg tgatctcggc
     5821 gctttcaggg ctgggcgtcg acaatgccct gctcaccgtc acgggccccg agtgcccgat
     5881 catcgacggc agcgccgcgc ctttcgccga aggcatcatg cgtgtcggcc tcgagatcca
     5941 gagcaagtcg cggcgctaca tcaagatcat gcgccaggtg ctggtccgca acaacgaggc
     6001 ctcggcggcg ctcgagccct acaatggccg gctgctcgac ctcgagatcg acttcgacag
     6061 caaggtcatc ggccgccagc ggatgatctt cgactggacg ccgcgcaaat atttcaccga
     6121 cgtgtcgcgg gcccgcacct tcggcttcgt ccgcgatgcc aagatcctgc gccaggccgg
     6181 ctatgcgctc ggctcgtcgc tcgacaactc catcaccgtg catgaggacc gcatcctcaa
     6241 tccgggcggg ctgcgctacg aggacgagtt cgtgcgccac aagctgctcg atgccatcgg
     6301 cgacctcgcc ctctgcgggc tgccgatcta tggccgcttc cgttcgtaca agggtggcca
     6361 cgccctcaac gcgctggtgc tgcacgggct gttcgccagc gaggccaatt atcaggtggt
     6421 caacgccgag gatctgccgc tcggctacga cgccctcaac gacatgccgg aggggctcga
     6481 agtgcggccg tacctccgtt ccgtcggctg atatcccggg ccacagtttt gattgaattg
     6541 ctgcttacgc cgcggagcgg tgctaaactg cgcgttgcaa tagggcgggg cgtttcgtga
     6601 caattactgg ctttgcagcg aggacgaccc gcgtcggccg attcgcgacg atggcggctt
     6661 ttgccggatt cctgggcgcc tgcagcatgt tcgggcagac caagatcacc gagcagccca
     6721 tcgtgccgcc ggaaacgctc taccagaacg cgctgaccga catggacaac cagcgctacg
     6781 tcacggcggt gacgcagctc aagcagctcg aacagcagca tccctactcg gacctcaacg
     6841 agaaggcgaa gctgatggag gtctatgcga attatcgcat gggcaagttc gacgacgcgg
     6901 tgctggcggc cgatcgctac acggcgcagt tccccacctc cgaccagacc gcctacgtgc
     6961 tgttcctcaa ggggacggcg tatttcgcgc agatgaccga catcacccgc gaccagggtt
     7021 ttgcgcagca ggcgatcgac acctacacgc tgctcatcaa caactatccg cagagcgact
     7081 acgccaagga cgcccgcgac aagatggtcg tcgcctacga ccagcttgcc ggcaaggaga
     7141 tgtcggtggg gcgctattac gagggcaacg gccagtacgc cgcggccatc aaccgcttcc
     7201 gcgccgtggt cgacaagtac cagacctcga gccacatcga ggaggcgctg ttccggctca
     7261 ccgagtgcaa cctgtcgctc gggctgacct cggaggcgca gactgcggcg gcggtgctcg
     7321 gccacaacta tccgtcgagc gactggtaca aggaagccta cgacctgctg cagaagcagg
     7381 gtctcgagcc caagctcaac gcgcagagca ccctggcgac ggcgatcacc cagccgagtg
     7441 tgtccgtgtc cagtgccggc gatggcaaga tcgacacgca ggttccggct cccaaaatct
     7501 agccggttcg gtgaggctaa gccggcgaga ggctagccag actctcgatc tgttgctagt
     7561 ttgttcgcat tcgacgcgga ggcagtgcgt ctcgtgctga gcgccatctc ggttcgcaac
     7621 atcgtcctga tcgaccagct cgacatcggg ctggagggtg ggctgaccgc gctcaccggc
     7681 gagaccggcg cgggcaagtc gatcctgctc gatgccctga cgctggcgct gggtgggcgc
     7741 ggcgacgcct cgctcgtgcg caacggcgcg gaaagcgggc aggtggtcgc ggtgctgcag
     7801 ctgccggcgg agcatccggc gcgggtggcg ctgcgcgaca acgagatcgc cgacgacgcc
     7861 gagttgatca tgcggcgcgt gcaatatgcc gatggccgca cccgggcctt catcaacgac
     7921 cagccggtgg gcgccggcct gatgcaggcg atcggccgcc ggcttgtcga aatccacggc
     7981 cagcacgacg accgcgcgct ggtcgatgcc gccgtgcacc gcggcctgct cgacgccttc
     8041 ggcgggctca gcggggacgc cggcgcgacg gccgccgcgc atggggcgct ggcggcgacg
     8101 gcggccgagg tggcggcgca gcggcaggtc atcgccgagg ctgcggcgcg cgaggattat
     8161 gcccggcacg tggttgagga gctggcgcag ctcaaccccg aatccggcga ggaagaggcg
     8221 ctggccgagc ggcggacgcg gctgatgcag ctcgagaagg ccgccgacga ggtgcgcgat
     8281 gcggacgaga tcctcggcgg tcccgccgcg cccggtccgg cgctcgccgg gctgatgcgc
     8341 cggctggcgc gcaaggtcga tggcggcatg ggcgtgttcc aaccgttggt cgatgcgatc
     8401 gaggggacgc tcaacgcgct cgatcgcacc gaggaggcgg tggagacgct gaagcgcgag
     8461 atggcgttcg acccggccga gctcgagcag gtcgagggcc gcctgttcgc gttgcgggcc
     8521 atggcgcgca agcatcacgt gctggccgac gagctgggcg cggtgctgcg gaaatatcgc
     8581 gacgagctgg aggcgctgca gagcggtgag gccaatctgg cccggctcga ggccgccgaa
     8641 acggccgcgc gcgaggtcta tctcaaggcg gcgcgcaggc tcagcgcggc ccgggcgaag
     8701 gccgccaagg cgctgagcaa ggcggtcgag gccgagctgc ccgacctgaa gctcggcact
     8761 gcgcggttca tcgtcgacca gcaggtcgac gagacgcggg ttgccgccac cggcttcgac
     8821 caggtggcgt tccaggtgca gaccaatccc ggcacgttgc cggggccgct gatgaaggtg
     8881 gcgtccggcg gcgagctcag ccggttcctg ctggcgctga aggtggtgct ggccgaccgc
     8941 ggttccgccc cggtgctgat cttcgacgag atcgacaccg gtgtcggcgg ggcagtggcc
     9001 gacgccatcg ggcgccggct gaagcggctg tcggagcgcg tgcaggtgct gacggtgacg
     9061 cacgcgccac aggtcgcggc gcgttccgac atgcatctgt tcatcgagaa gcaggcgatc
     9121 gaggaggggg cgttcgtgcg cacccatgtg cggcggctcg acggcgcggc gcgcagggaa
     9181 gagatcgccc gcatgctcgc gggcgcgacg atcaccgcag aggcccgggc ggcggccggc
     9241 aagttgctgt cggacgtggc atgaccgaca cgcgggacgt cgagagctac agcgaggacg
     9301 aggcgcgggc cgagctcgag cggctgcacg aggtgctggg gaaggccgac atcgcctacc
     9361 accagaacga tgctccaacg atcaccgatg ccgcctatga cgggctgaag cggcgctacc
     9421 tggcgctgga atcggcgttt cccgagctgc ggcgtccgga cagcctttcg ggcaaggtcg
     9481 gggcgccggc ggcggatggc ttcgccaagg tccggcacga ggtgccgatg ctcagcctcg
     9541 ccaaggccta caccgagcag gacgtgatcg acttcgccga gcgggcgcgg cgctttttcg
     9601 agcgcgacaa ggacctcgag ctggtgttca ccgccgagcc caagatcgac gg
//
LOCUS       DATAZA010000286         3308 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_145626, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000286 DATAZA010000000
VERSION     DATAZA010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3308
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145626"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            583..1311
                     /locus_tag="VHZ56_07275"
     CDS             583..1311
                     /locus_tag="VHZ56_07275"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX4297807.1"
                     /translation="MHATLFRPPGPGPFPLAVVNHGSDEDIHARIAQSLPSFPALTAW
                     LVARGYAVLVPQRPGHGVTGGPYLEAEGSCAAPDYAKAGHAAAASIADAVDFMRGQSF
                     VRPRGIVVIGNSTGGWGALALAASPPAGVAAIVSFAGGRGGRNGGRPNDNCAPERLVA
                     AAGTFGADEKLPTLWLYARNDSWFPPDLSARLAAAFTAAGGRAEYHLLPPIPGDGHAL
                     INTPGDTAGWSPLLAAFLKRTAGR"
     gene            1430..2749
                     /locus_tag="VHZ56_07280"
     CDS             1430..2749
                     /locus_tag="VHZ56_07280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008755 - O antigen polymerase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen polymerase"
                     /protein_id="HEX4297808.1"
                     /translation="MESVVATLGVLVLLAGLGLAYLEARRSGRLSLLCWTLLGVGGVY
                     GACWAIVAIATVNGLNPTWAAYLLPYESVWPLHTAATALLVAGLEAGWFTAGAIPWTR
                     RTAPIAIDARRLVIALWLLLVIAIGAQLLFSMAYGGLLGAYRAGGAIRAGVSKVPNAW
                     LFLHPFGGFAIPAAVGFFGLILSRARHWAVVIGFIVALLFALYILVTWMGRIDFVIFI
                     LAFPLAFFLSRRWSATRLLLVALVAGVAIVVGAFAVSQIFHLKPASNLFTYVGRELSF
                     PFVAFFAWSQTPGTGFRWFSDYLEMPIYYLPQSIWSHFHQATETINTTLILGTPKGSG
                     GNTSSMPVDLLSAGYIELGFAGVPILGVFFGFLLRLLDAFVARIAPAGLAAALSALFA
                     LEVAVHAVLYGDADHLSNFGLVAPAILVAVVLKWPPLTAPSPRSASG"
     gene            complement(2715..>3308)
                     /locus_tag="VHZ56_07285"
     CDS             complement(2715..>3308)
                     /locus_tag="VHZ56_07285"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX4297809.1"
                     /translation="AVAGTGVDLAQWVALPPVTAPLTFTLAARLIREKGIEDFVEAAR
                     RIRRDDPRVRFVLLGGIDDNPGAIGRQAVQSWVDEGVVEWPGHVDVRRWLAETSVFVL
                     PSVYREGVPRSIQEAMATGRAIITTDSPGCRETVVDGQNGFLVPPRDVAALAAAMQRF
                     VATPDLVARMGRESRQLAEARFDVRKINRTLIEAMGL"
BASE COUNT          435 a         1258 c         1010 g          605 t
ORIGIN      
        1 gccatcgccg gagacgccag cccgatcgcc agcatgcccg ccgcggtcgc cgtgccgcca
       61 agcaaccagg ggcgcgtcag ggcccgccgg gagaaaccca ccggcaactc cgccgcaatc
      121 tgcttgccga ctacagtctt ccgtccgaca cgcttcgcca taggccgggc cccttgtttg
      181 aaaatccgcc gcgcacaaat attcgaaccc ggattctttc cgggcttaaa gtccttcagc
      241 gtacgcatcg gcgcgcgccg caaacaaggg tgattcgatt caaaacggcg aaaatgcgtt
      301 aacattgccc taacactgtt gccacgccgc cacgttctcg ccgcctttcg gcctgcggct
      361 tccgcatagc gccgggtgcg cccttggatc gttccagccg gggaggctgc tgtgaaacct
      421 gccggctcgt tccgcccgct ttgctccgcc atcctggctg cgattctctg cctcttcacc
      481 ttgacatcgt tagcagcgcc gctccccggc ccggccggcg acgaaggcgc gccgtttcgc
      541 gcccagccct ggctgattcc ctcggcggcg ccgggtgtcc tcatgcacgc caccctgttc
      601 cgcccgccgg gccccggtcc gttcccgctg gccgtcgtca accacggctc cgacgaagac
      661 atccacgccc gcatcgccca atcgctgccg tcgttcccgg cgctcactgc ctggctggtt
      721 gcccgcggct acgccgtgct ggtgccgcag cggccgggcc atggggtcac cggcggcccc
      781 tacctcgagg cggagggctc gtgcgcggcc cccgactacg ccaaggccgg ccacgccgcc
      841 gccgccagca tcgccgacgc cgtcgatttc atgcgcggcc agagcttcgt tcggcctcgc
      901 ggcatcgtcg tcatcggcaa ttccaccggc ggttggggtg ccctggcgct ggccgcgtca
      961 ccccccgccg gggtcgccgc catcgtcagt ttcgccggcg gccgcggcgg tcgcaatggc
     1021 ggccgcccga acgacaactg cgctcccgag cggctggtcg ccgccgccgg caccttcggc
     1081 gcggacgaaa agctgccgac gctctggctc tatgcccgca acgacagctg gttcccgccc
     1141 gatctctcgg cccgcctcgc cgccgccttc accgccgccg gcggccgcgc cgaataccac
     1201 ctgctgccgc ccatccccgg cgacggccac gccctcatca acacccccgg cgacaccgcc
     1261 ggctggtccc cgctcctcgc cgccttcctg aagcgcaccg ccggccgttg agaggccgcc
     1321 gcccacaagc gacgaccatc ggccgccttg gcttgctttt ctcgggaagg gctgcaactt
     1381 cggggcaggc cccggccacc ggcgaccgat tccatctgcg gagagtgtca tggagagcgt
     1441 cgttgcaacg ctcggcgtgc tggtattgct cgcaggcttg gggctggcct atctcgaggc
     1501 ccgccgaagc ggccggctct ccctgttgtg ctggacgctg ctgggggtcg gtggcgtcta
     1561 tggcgcctgc tgggccatcg tggccatcgc cacggtcaac ggtctcaatc ccacatgggc
     1621 agcctacctg ctgccgtacg aatcggtgtg gccgctgcat acggcggcga cagcactgct
     1681 cgtcgccggc ctcgaggccg gctggttcac ggccggcgcg attccctgga cgcgccgcac
     1741 cgcgccgatc gccatcgacg cccgccggct ggtcatcgcg ctctggctgc tgctggtcat
     1801 cgcgatcgga gcacaactgc tgttctcgat ggcctatggc ggactcctcg gtgcctatcg
     1861 cgccggcgga gcgatccgcg ccggggtatc caaggtgcca aatgcctggc tgttcctgca
     1921 ccccttcggc ggctttgcga tccccgccgc ggtgggcttc ttcggactga tcttgtcgcg
     1981 tgcgcgccac tgggccgtcg tcattggttt tatcgtggcg ctgctctttg ccctctacat
     2041 cctcgtcacc tggatgggca ggatagactt cgtcatcttt atcctggcct tcccgctggc
     2101 ctttttcctg agccgcaggt ggagcgcgac gcgcctgttg ctcgttgcgc tcgttgccgg
     2161 cgtcgcgatc gtcgtcggcg ccttcgcagt cagccagatc tttcacctga agccggccag
     2221 caatctgttc acctatgtcg ggcgcgagct cagctttccc ttcgtcgcgt tctttgcgtg
     2281 gtcgcaaacg cccggcaccg gcttccgctg gttttcggac tatctcgaga tgccgatcta
     2341 ctatttgcca cagtccatct ggagccactt tcaccaggcg acggagacga tcaacaccac
     2401 gctgatcctg ggcactccca aaggcagcgg cggcaatacc agcagcatgc cggtcgacct
     2461 cctgagcgcg ggctacatcg agctcggctt tgccggcgtt ccgatactcg gcgtcttctt
     2521 cggcttcttg ctgcgcctgc tcgacgcatt cgttgcgcgt atcgctcccg caggacttgc
     2581 ggcggcgctg tccgcactgt tcgcgctcga agtcgccgtt cacgccgttc tctacggcga
     2641 cgccgaccac ctcagcaatt tcggcctcgt cgccccggcg atccttgtgg ccgtcgtgct
     2701 gaagtggccg ccgcttacag ccccatcgcc tcgatcagcg tccggttgat tttccgcacg
     2761 tcgaacctcg cctcggccag ttgccggctc tcgcggccca tccgcgccac caggtccggc
     2821 gtcgcgacga accgctgcat ggcggcggcg agggcggcca cgtcgcgcgg cggcaccagg
     2881 aagccgttct ggccgtcgac gacggtctcg cggcagccgg gggagtcggt cgtgatgatc
     2941 gcccgccccg tcgccatcgc ttcctggatg cttcgcggca cgccttcgcg atagaccgac
     3001 ggcagcacga acacgctggt ctcggccagc caccgccgga cgtcgacatg tccgggccac
     3061 tcgacgaccc cttcgtctac ccaggactgg accgcctgcc ggccgatcgc acccggattg
     3121 tcgtcgatgc cgccgagcag gacgaagcgc acccgcggat cgtcgcgcct gatccgtcgc
     3181 gccgcctcga cgaaatcctc gatgcccttt tcccggatca gccgcgccgc aagggtaaag
     3241 gtcagcggtg cagtgaccgg cggcagcgcc acccactgcg ccaggtccac cccggtgccg
     3301 gcgacggc
//
LOCUS       DATAZA010000287         2908 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2467135, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000287 DATAZA010000000
VERSION     DATAZA010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2908
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2467135"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..420
                     /locus_tag="VHZ56_07290"
     CDS             <1..420
                     /locus_tag="VHZ56_07290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020184490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanophycin synthetase"
                     /protein_id="HEX4297810.1"
                     /translation="AIFVDYAHKPVALETALGALRPYATGKLAVVFGAGGDRDRGKRP
                     MMGEIAARMADRVYVTDDNPRGEDARAIRSEILAAVPDAAEIGDRRSAIETAIRALGP
                     GDVLLIAGKGHEDYQIVGGNKHHFSDHEVVAETLKGL"
     gene            420..1826
                     /gene="murF"
                     /locus_tag="VHZ56_07295"
     CDS             420..1826
                     /gene="murF"
                     /locus_tag="VHZ56_07295"
                     /inference="COORDINATES: protein motif:HMM:TIGR01143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEX4297811.1"
                     /translation="MTPLWTVAEAVAATGGRPEKLSDGPLASVSIDSRELEADALFVA
                     IKGDKLDGHDYVAAALAGGAAAAMVSEAWFKAHGGERLIVVPDPLEGLQGLARAARTR
                     SKAVFIAVTGSVGKTTTKEAIRTVLAVAGPTHYSIKSFNNQWGVPLMLARMPREAQFG
                     VFEIGMNHAGEITPLVRLVRPNIALITSVAAAHLEFFNSVTEIAEAKAEIFLGLEPDG
                     TVVLNTDHDYLHVLFAKAREAGITRIVTYGYDEEADWRIVSTEVAGSRTFAQIMHDGK
                     RSDLNLQLRGRHMVANATAAMVVGKLAGVEPYQTLKVLADMGAPEGRGETTRLGPPGR
                     PLLLVDESYNANVASMTAAMEVFASINPPSGHKVLVLGDMLELGPSGAELHKSLKDSV
                     LATGATRIFLIGTAIESLAEALGPERVTDRARHVDSILEDILQSLALGDAVMVKGSKG
                     VRLALLVDKIKQRFGVQS"
     gene            1847..>2908
                     /gene="mraY"
                     /locus_tag="VHZ56_07300"
     CDS             1847..>2908
                     /gene="mraY"
                     /locus_tag="VHZ56_07300"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012173060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEX4297812.1"
                     /translation="MLYLLGQLGESLTAFNVFRYITFRTAGAVVTALFFVFLFGPQII
                     AGLRVRQGKGQPIREDGPQGHLLTKKGTPTMGGLMILAGAVTSTLLWANLSNGYVWVV
                     LAVTMSFGAIGFYDDYLKVKRMSHRGFSGRQRLILEAIVAIIAAYFLSMLTEPKIATS
                     VMFPFVKGYGLPLFYGFYLFAGFVIVSAGNSVNLTDGLDGLAIVPVMVAAACFALIAY
                     LVGSATFSEYLFINNVPGTAELSVVCGAIIGAGIGFLWFNAPPAQIFMGDTGSLALGG
                     ALGTIAVAVKHEIVLGIIGGLFVLEAVSVIVQVASFRLTGKRVFKMAPIHHHFEMLGW
                     TESQVVIRFWIISFVLALIG"
BASE COUNT          462 a          933 c         1011 g          502 t
ORIGIN      
        1 gcgatcttcg tcgactacgc gcacaagccg gtggcgctcg agacggcgct cggcgcgctg
       61 aggccctacg ccaccggcaa gctggcggtg gtgttcggcg ccggcggcga ccgcgaccgc
      121 ggcaagcgtc cgatgatggg cgagatcgcc gcacgcatgg ccgaccgggt ctacgtcacc
      181 gacgacaatc cgcgtggcga ggatgcgcgc gccatccggt cggagatcct cgctgcggtg
      241 cccgacgctg ccgagatcgg cgaccggcgg agcgccatcg aaaccgccat ccgggcgctc
      301 ggtccgggcg acgtgctgct gattgccggc aagggccacg aggactatca gatcgtcggc
      361 ggcaacaagc accacttctc cgaccatgaa gtggtcgcgg agacgttgaa agggctttga
      421 tgaccccgct gtggaccgtc gcggaggccg tcgctgcgac cggcgggcgg cccgagaagc
      481 tgtcggacgg gccgctcgcc tcggtgtcga tcgattcccg cgagctcgag gccgatgcgc
      541 tgttcgtcgc catcaagggc gacaagctcg acggccacga ctacgtcgcg gcggcgctgg
      601 ctggcggcgc cgcggcggcg atggtgtcgg aggcctggtt caaggcgcat ggcggcgagc
      661 ggctgatcgt ggtgccggat ccgctcgagg gcttgcaggg gctggcgcgg gcagcgcgga
      721 cccgcagcaa ggcggtgttc atcgcggtga cgggcagcgt cggcaagacg acgaccaagg
      781 aagccatccg caccgtgctc gccgtcgccg ggccgacgca ttattcgatc aagagcttca
      841 acaaccagtg gggcgtgccg ctgatgctgg cgcggatgcc gcgcgaagca cagttcggcg
      901 tgttcgagat cggcatgaac cacgccggcg agatcacgcc gctggtgcgg ctggtccggc
      961 ccaacatcgc gctgatcacc agcgtggcgg cggcgcacct cgaattcttc aactcggtca
     1021 ccgagatcgc cgaggccaag gcggagattt tccttggcct cgagcccgac ggcacggtgg
     1081 tgctcaacac cgaccacgac tatctgcacg tgctgttcgc caaggcccgc gaagccggga
     1141 tcacgcggat cgtcacctac ggctacgacg aggaggcgga ctggcgcatc gtctcgaccg
     1201 aagtcgccgg ctcgcggacg tttgcgcaga tcatgcacga cggcaagcgc tcggacctca
     1261 acctgcagct gcgcgggcgc cacatggttg ccaacgccac cgccgcaatg gtcgtgggca
     1321 agctcgccgg cgtcgaaccc taccagacgc tcaaggtgct ggccgacatg ggggcgcccg
     1381 agggccgggg cgagacgacg cggctcggac cgccgggccg gccgctgctg ctggtcgacg
     1441 agagctacaa tgccaacgtc gcctcgatga ccgccgcgat ggaggtgttc gcctcgatca
     1501 acccgcccag cgggcacaag gtgctggtgc tcggcgacat gctggagctg gggccatcgg
     1561 gcgccgagct gcacaaatcg ttgaaggaca gcgtgctggc cactggtgca acgaggattt
     1621 tcctcatcgg cacggcgatc gaatcgcttg ccgaggcgct cggtccggag cgcgtgacgg
     1681 accgcgccag gcacgtcgat tcgatcctcg aggacatcct ccagagcctt gccttgggcg
     1741 acgctgttat ggtcaaaggg tcaaaaggcg ttcgcctcgc gctcctggtc gacaagatca
     1801 aacagcggtt tggcgtccag tcttagagga cggagacgac ggacggatgc tctacctact
     1861 cggccagttg ggcgagagcc tcacagcgtt caacgtcttc cgctatatca ctttcaggac
     1921 cgccggcgcc gtcgtcacgg cgctgttttt cgtcttcctg ttcgggccgc agatcatcgc
     1981 cgggctgcga gtccgccaag gcaagggcca gccgatccgc gaggacgggc cgcaggggca
     2041 tctgctgacc aagaagggca cgcccaccat gggcgggctg atgatcctcg ccggtgcggt
     2101 gacctcgacg ctgctctggg caaacctgtc gaacggctac gtctgggtgg tgctggcggt
     2161 gacgatgtcg ttcggcgcca tcggctttta cgacgattac ctcaaggtca agcggatgtc
     2221 gcaccgtggc ttctccgggc ggcagcggct gatcctcgag gccatcgtgg cgatcatcgc
     2281 ggcgtatttc ctgtcgatgc tcaccgagcc caagatcgcc acctcggtga tgttcccgtt
     2341 cgtcaagggc tacgggctgc cgctgttcta cggcttctac ctgttcgccg gcttcgtcat
     2401 cgtttcggcc ggcaactcgg tcaacctgac ggacgggctc gacgggctgg cgatcgtgcc
     2461 agtgatggtg gcggcggcct gtttcgcgct gatcgcctat ctggtggggt cggccacctt
     2521 ctcggaatat ctgttcatca acaacgtgcc gggcacggcc gagctgtccg tcgtctgcgg
     2581 ggcgatcatc ggggccggta tcggctttct gtggttcaac gcgccgccgg cccagatctt
     2641 catgggcgac accggctcgc tcgcgctggg cggcgcgctc ggcaccatcg cggtggcggt
     2701 caagcacgag atcgtgctgg gcatcatcgg cgggctgttc gtgctcgagg cggtgtcggt
     2761 gatcgtgcag gtggcaagct tccggctcac cggcaagcgg gtgttcaaga tggccccgat
     2821 ccaccatcat ttcgagatgc tggggtggac cgagagccag gtggtgatcc gcttctggat
     2881 catttccttc gtcctggcgc tgatcggg
//
LOCUS       DATAZA010000288         2308 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3975837, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000288 DATAZA010000000
VERSION     DATAZA010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2308
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3975837"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..188)
                     /locus_tag="VHZ56_07305"
     CDS             complement(<1..188)
                     /locus_tag="VHZ56_07305"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEX4297813.1"
                     /translation="MSFNTFGQMFRFTTWGESHGPAIGVVVDGCPPGIPISAELIQRD
                     LERRKPGQSRFTTQRREE"
     gene            complement(234..860)
                     /locus_tag="VHZ56_07310"
     CDS             complement(234..860)
                     /locus_tag="VHZ56_07310"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEX4297814.1"
                     /translation="MTPDWPELYFVRHGETNWNAEGRYQGSRDIPLNDHGRGQADLNG
                     DLLRRLLVRAGRAPTDFSWYVSPLSRTRETMDRIRARIGEPPPDVTIDPRLTEISFGI
                     YEGHLHVDLAAGAMAIAGERDADFWYFRPPEGESYEDVAHRVADFGASLPGPAVVVAH
                     GGILRILRRLIEDFPADRAVNWFPPQDCVVHFTNHRAVVYPAGQSWDD"
     gene            complement(868..1677)
                     /locus_tag="VHZ56_07315"
     CDS             complement(868..1677)
                     /locus_tag="VHZ56_07315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4297815.1"
                     /translation="MADGLMAGKRGLIMGVANNRSIAWGITKALAGQGAEIAFSYQGE
                     ALKKRIEPLAAEVGSDFVVECDVSNEAAIDETFRQIKERWGRLDFLVHAIGFSDKNEL
                     EGRYIDKTTRANFALTMDVSVYSFTAVARRAEPLMQAGGALLTLTYYGADKYVPNYNV
                     MGVAKAALEASVRYLAVDMGKGGIRVNAISAGAIKTLAASGISGLRDMLHWQEENAAL
                     RRNVDIDDVGRAGLYLLSDLSSGVTGEIHYVDAGFNIVGMKLMDEVSAPTA"
     gene            1782..>2308
                     /locus_tag="VHZ56_07320"
     CDS             1782..>2308
                     /locus_tag="VHZ56_07320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX4297816.1"
                     /translation="MAMNFSHVLAGLTAILGEDGVVGDAAGMQTYLNEPRRRFHAAAA
                     AVARPADVAQVQALCRWANEQHVPLVPQGGNTGLVGAQVPMRGDEVIVSLTRLDRVRE
                     VDAAAGHMTLEAGVILSRAHEIAEDAGAMFPLWIASEGSARIGGVLSSNAGGVQVLAF
                     GNARELCLGVEAVLA"
BASE COUNT          366 a          696 c          864 g          382 t
ORIGIN      
        1 tcctcctcgc ggcgctgcgt ggtgaagcgc gactggccgg gcttgcggcg ctcaaggtcg
       61 cgctggatca actcggcgct gatcggaata ccgggcgggc agccgtccac cacgacgccg
      121 atggccggcc catggctttc accccaggtg gtgaagcgaa acatctggcc gaaggtgttg
      181 aaggacatgg aagctcccgg gtgagcgact tctaggagcg ccccgccgga gcgtcaatcg
      241 tcccaactct ggccggcggg gtagacgacg gcgcggtggt tggtgaagtg gacgacacaa
      301 tcctgcggcg ggaaccagtt gacggcgcgg tcggcgggga agtcctcgat caggcggcgg
      361 agaatgcgca ggatgccgcc gtgggcgacc accaccgccg gacccgggag cgaggcgccg
      421 aaatcggcga cgcggtgggc gacgtcctcg tagctctcgc cctcgggcgg acggaaatac
      481 cagaaatcgg cgtcgcgctc gccggcgatg gccatggcgc ccgcggcaag atcaacgtgg
      541 aggtggcctt cgtagatgcc gaaggagatc tcggtgaggc gcgggtcgat ggtgacatcc
      601 ggcggcggct cgccgatgcg ggcgcgaatg cggtccatgg tctcgcgggt tcggctcagc
      661 ggcgagacat accaggagaa atcggtgggc gcgcggccgg cgcgcacgag caaccggcgc
      721 agcaggtcgc cgttgaggtc agcctggccg cggccgtggt cgttgagcgg gatgtcgcgg
      781 gagccctggt agcggccttc ggcgttccag ttggtttcgc cgtggcggac gaaatagagc
      841 tccggccagt cgggggtcat cgtgaactca ggccgttgga gccgacactt catccatcag
      901 tttcatgccg acgatgttga agccggcgtc gacgtagtgg atttcgccgg taacgccgct
      961 ggaaaggtcg gacagcagat agaggccggc acggccgacg tcgtcgatat cgacattgcg
     1021 gcggagcgcg gcgttctcct cctgccagtg cagcatgtcg cggaggccgg aaatgccgga
     1081 cgcggcaagc gtcttgatgg caccggccga gatggcgttg acgcggatgc cgcctttgcc
     1141 catgtcgacc gcgagatagc ggacggatgc ctcgagcgcc gccttggcca cacccatgac
     1201 gttgtagttg ggcacgtatt tgtcggcacc gtaataggtg agcgtcagaa gtgcgccccc
     1261 cgcctgcatc agcggttcgg cacggcgcgc gacagcggtg aaggaataga ccgagacgtc
     1321 catggtcagc gcgaagttgg cgcgcgtggt cttgtcgatg tagcggcctt cgagctcgtt
     1381 cttgtcggaa aagccgatgg cgtggacgag gaagtcgagg cgaccccacc gctccttgat
     1441 ctggcggaag gtttcgtcga tggctgcctc gttcgagaca tcgcattcga cgacaaaatc
     1501 ggagccgact tcggcggcga gcggctcgat gcgcttcttc agcgcctcgc cctggtagga
     1561 aaaggcgatc tcggcgccct gcccggccag ggccttggtg atgccccagg cgatggagcg
     1621 gttgttggcg acgcccatga tcagcccgcg cttgcccgcc atcagtccgt cggccatcgg
     1681 atttccttcc ggtcgttgag gattgaggct tgtgccatag ggtccggcag ggggcaagtt
     1741 gcggcttgtt tcgcgaccga cgccgattat ggtgccgcgc catggccatg aacttctccc
     1801 acgtcctcgc gggcttgacc gcaatcctgg gcgaagatgg cgtggtcggc gatgccgccg
     1861 gcatgcagac ctacctgaac gagccgcggc gacggttcca tgccgcggcg gcggcagtgg
     1921 cgcggccggc cgacgtggcg caggtgcagg cgctctgccg ctgggccaat gagcagcacg
     1981 tgccgctcgt cccgcagggc ggcaacaccg ggctggtcgg ggcgcaggtg ccgatgcgcg
     2041 gcgacgaggt gatcgtttcg ctgacgcggc tcgaccgggt gcgcgaagtc gatgcggcgg
     2101 ccgggcacat gacgctcgag gccggggtga tcctcagccg cgcgcacgag atcgccgagg
     2161 acgcgggcgc gatgttcccg ctgtggatcg cgagcgaggg atcggcgcgg atcggcgggg
     2221 tgttgagctc caacgccggc ggtgtgcagg tgctggcctt cggcaatgcg cgcgagcttt
     2281 gcctcggggt cgaggcggtg ctggcgga
//
LOCUS       DATAZA010000289         3552 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3395486, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000289 DATAZA010000000
VERSION     DATAZA010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3552
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3395486"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..687
                     /locus_tag="VHZ56_07325"
     CDS             <1..687
                     /locus_tag="VHZ56_07325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015341071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEX4297817.1"
                     /translation="PYLMLNYLGKPRDVMTLAHELGHGVHQVLAGPQGSILSNTPLTL
                     AETASVFGEMLTFRSMLEKTTDPRHRFAMLSSKVEDMLNTVVRQIAFYTFERRVHTAR
                     KEGELTTEQLNEIWLEVSRESLGPAIKLNDGYGIFWSYIPHFIHSPFYVYAYAFGDCL
                     VNSLYAQYEKASDGFAERYFELLKAGGSKHHSELLKPFGLDARDPNFWSLGLSMIERL
                     IGELDATNPN"
     gene            702..965
                     /locus_tag="VHZ56_07330"
     CDS             702..965
                     /locus_tag="VHZ56_07330"
                     /inference="COORDINATES: protein motif:HMM:NF019452.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aa3-type cytochrome c oxidase subunit IV"
                     /protein_id="HEX4297818.1"
                     /translation="MTHEVAHAELVIDANEAEQMDEAMDYAQHRATWDGFTNLVKWMI
                     IELALIVLALFCLIQGNAPAGGVLFLLIAVVAPIAGLFFRSAR"
     gene            1039..2184
                     /locus_tag="VHZ56_07335"
     CDS             1039..2184
                     /locus_tag="VHZ56_07335"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004446453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008746 - NAD(P)+ transhydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HEX4297819.1"
                     /translation="MKIAIVRERAEGETRVAATPETVTKLLGLGATVSIEAGAGAGAR
                     FPDVDYQKAGATVEASAQAALQGADIVLTVRRPQAAMLTGVNKGALVIGAMDPYGNEA
                     EIDALGKAGVTTVAMEFMPRITRAQVMDILSSQANLAGYQAVIDAAASFERAFPMMMT
                     AAGTIRPAKVFVMGAGVAGLQAIATARRLGAVVSATDVRAAAGEQVESLGAKFIVTDA
                     LKDASGTGGYARELTKDEQAAQAELVAGHISKQDIVITTALIPGRPAPRLVSKAMVES
                     MGDGTVIVDLAAERGGNVELTRPGEVITTPNGVTILGYRNMPARLATSASQLYARNLV
                     AFLETMFDKKTKVFAVNWDDELVKATVLTRDGAIVHPNIKLPGASAA"
     gene            2236..2538
                     /locus_tag="VHZ56_07340"
     CDS             2236..2538
                     /locus_tag="VHZ56_07340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-translocating transhydrogenase family
                     protein"
                     /protein_id="HEX4297820.1"
                     /translation="MELIDPFTFRLAIFVLAIFVGYFVVWSVTPALHTPLMSVTNAIS
                     SVIVVGALLAVGTHLTADASWASKVFGFIALVFASVNIFGGFLVTQRMLAMYKKKG"
     gene            2542..>3552
                     /locus_tag="VHZ56_07345"
     CDS             2542..>3552
                     /locus_tag="VHZ56_07345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEX4297821.1"
                     /translation="MVLDPNIAAVLYLVAGVLFILALRGLSSPASSRQGNIFGMVGMA
                     IAILTTLAAAHVSDVLSWVLVVVGIALGGGFGAVLARRVKMTDMPQLVAAFHSLVGLA
                     AVFVAAGALYAPQAFGIGDATGIHLEALIEMSIGVAIGAFTFTGSVIAFAKLNGNMSG
                     KPILLPARHVLHIVIGIVLVALVVGFAATGNPLLFWLITIVALALGGLMIIPIGGADM
                     PVVVSMLNSYSGWAAAGIGFTLGNTALIITGALVGSSGAILSYIMCKAMNRSFISVIL
                     GGFGGDAAAAGTAEEETRPVKQGSAEDAAFMMKNASKVIIVPGYGMAVAQAQHAVREM
                     ADR"
BASE COUNT          582 a         1156 c         1202 g          612 t
ORIGIN      
        1 ccgtatctga tgctcaacta tctgggcaaa ccgcgcgacg tgatgacgct ggcgcacgaa
       61 ctggggcacg gcgtccacca ggttctggcc ggtccgcagg gctcgatcct cagcaacacg
      121 ccgctgaccc tggccgagac cgccagcgtc tttggcgaga tgctgacgtt ccgctcgatg
      181 ctcgagaaga ccaccgaccc caggcaccgc ttcgcgatgc tgagttcgaa ggtcgaggac
      241 atgctcaaca cggtggtgcg gcagatcgcc ttttacacct tcgagcgccg ggttcacacg
      301 gcgcgcaagg agggcgagct caccaccgag cagctcaacg aaatctggct cgaggtcagc
      361 cgcgaaagcc tcgggcccgc gatcaagctc aacgacggct acggcatctt ctggtcgtac
      421 attccgcact tcatccactc gccgttctac gtctacgcct atgccttcgg cgattgtctt
      481 gtgaactcgc tctatgccca gtatgagaag gccagcgacg ggttcgcgga gcgttatttc
      541 gagttgctga aagccggggg gtcgaagcat cattccgaat tgctcaagcc ctttgggctc
      601 gatgcgcgcg acccgaactt ctggtcgctg ggactatcca tgatcgaacg cctgatcggc
      661 gagctcgacg ccaccaatcc gaactgaacg ccgaggacac catgacccac gaagtcgcgc
      721 atgccgagct cgtcatcgac gccaacgagg ccgagcagat ggatgaggcc atggactacg
      781 cccagcaccg ggcgacctgg gacgggttca ccaatctggt caaatggatg atcatcgagc
      841 tggcgctgat cgtgctcgcg ctgttctgcc tcatccaggg caatgcgccg gccggcggcg
      901 tgctcttcct cctgattgcc gtggtcgcgc cgatcgccgg cctgttcttc aggtcggccc
      961 gctgagcgcc accgcgtccc attggcgtgc cggcagcagc aggccggcct gcgtccgctg
     1021 tccgagctgg agacatcgat gaagattgca atcgtccgcg agcgggccga gggggaaacc
     1081 cgcgtggcgg cgacgccgga aacggtcacc aagctgctgg ggctgggcgc caccgtgtcg
     1141 atcgaggccg gtgccggcgc gggcgcgcgc ttcccggatg tcgattacca gaaggccgga
     1201 gcgacggtcg aggccagtgc ccaggcggcg ctgcagggcg ccgacatcgt gctgacggtg
     1261 cggcggccgc aggcggcgat gctgacgggc gtcaacaagg gcgcgctggt gatcggcgcg
     1321 atggatccct acggcaacga ggccgagatc gatgcgctgg gcaaggccgg cgtgacgacg
     1381 gtggcgatgg agttcatgcc gcgcatcacc cgcgcgcagg tgatggacat cctctcgagc
     1441 caggccaacc tcgccggcta ccaggcggtg atcgacgcgg cggcgagctt cgagcgcgcc
     1501 ttcccgatga tgatgacggc ggcgggcacc attcggccgg ccaaggtgtt cgtcatgggc
     1561 gccggcgttg cgggcctgca ggcgatcgcc acggccaggc ggctcggcgc ggtggtgagc
     1621 gccaccgacg tgcgcgcggc ggccggtgag caggtcgaga gcctcggcgc caagttcatc
     1681 gtcaccgatg cgctcaagga cgcctcgggc accggcggct atgcccgcga actcaccaag
     1741 gacgagcagg cagcgcaggc cgaattggtc gcgggacata tctccaagca ggacatcgtc
     1801 attaccacgg cattgatccc cggccggccg gcgccaaggc tggtgagcaa ggcgatggtc
     1861 gagtcgatgg gagacggcac ggtgatcgtc gaccttgcgg ccgagcgcgg cggcaacgtc
     1921 gagctgacga ggccgggcga agtgatcacc acgccgaacg gggtgaccat cctcggctac
     1981 cggaacatgc cggcgcggct cgcgacctcg gccagccagc tctatgcgcg caacctcgtc
     2041 gcgttcctcg agaccatgtt cgacaagaag accaaggtct tcgccgtgaa ctgggacgac
     2101 gaactggtga aggcgaccgt gctgacccgg gacggcgcga tcgtccatcc caacatcaag
     2161 cttccgggcg ccagcgcggc ctgatcgctc actgccaacg gcaactcttt tgcgcccggc
     2221 gcgaggacac gagacatgga actgatcgat cccttcacct tccggctcgc catcttcgtt
     2281 ttggcgatct tcgtcgggta tttcgtcgtc tggtcggtga cgccggcgct gcatacgccg
     2341 ctgatgagcg tgacgaacgc catttcatcg gtgatcgtgg tcggtgccct actggccgtt
     2401 ggcacgcatc tgacagccga cgccagctgg gcgagcaagg tgttcggttt catcgcgctg
     2461 gtgttcgcca gcgtcaacat cttcggcggg ttcctcgtca cccagcgcat gctggcaatg
     2521 tacaagaaga agggctgaca catggtgctc gaccccaata ttgccgccgt cctctatctc
     2581 gtcgcgggcg tgctgttcat ccttgcgctg agggggctgt cgagcccggc ctcgtcgcgg
     2641 cagggcaaca tcttcggcat ggtcggcatg gcgatcgcca tcctgacgac gctggccgcc
     2701 gcgcatgtga gcgacgtcct cagctgggtg ctggtcgtcg tcggcatcgc gctcggcggc
     2761 ggcttcggcg cggtgctggc gcggcgcgtg aagatgacgg acatgccgca gctggtcgcg
     2821 gcgttccact cgctggtcgg cctcgccgcg gtgttcgtgg cggccggcgc gctctacgcg
     2881 ccgcaggcgt tcggcatcgg cgacgccacc ggcatccatc tcgaggcgct gatcgagatg
     2941 tcgatcggtg tcgccatcgg tgccttcacc ttcaccggtt cggtgatcgc cttcgccaag
     3001 ctcaacggca acatgagcgg caagccgatc ctgctgccgg cgcggcacgt cctccacatc
     3061 gtcatcggca tcgtgctggt ggcgctggtg gtcgggttcg ccgccaccgg aaacccgctg
     3121 ctgttctggc tgatcaccat cgtggcgctg gcgctgggcg ggctgatgat catcccgatc
     3181 ggcggcgccg acatgccggt ggtcgtctcg atgctcaact cctattcggg ctgggccgcg
     3241 gccggcatcg gcttcacgct cgggaacacg gcgctgatca tcaccggcgc gctggtcggc
     3301 tcgtccggcg cgatcctaag ctacatcatg tgcaaggcga tgaatcgcag cttcatctcg
     3361 gtgatcctgg gggggttcgg cggcgatgcc gctgcggccg gcacggccga ggaggagacg
     3421 cggccggtca agcagggttc ggccgaagac gccgcgttca tgatgaagaa cgcctccaag
     3481 gtcatcatcg tgcccggcta cggcatggcg gtggcgcagg cccagcacgc ggtgcgcgag
     3541 atggccgacc gg
//
LOCUS       DATAZA010000290         1574 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1074127, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000290 DATAZA010000000
VERSION     DATAZA010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1074127"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            186..1334
                     /locus_tag="VHZ56_07350"
     CDS             186..1334
                     /locus_tag="VHZ56_07350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019862948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4297822.1"
                     /translation="MSASVSPSAGQAVSLRALTKSFGGRPVLSDLTLEIGAGEFLAVL
                     GPSGSGKTTLMRIIAGFEAPDSGSVAIGGTDVTDLPAERRNVNTVFQSYALFPHLSVL
                     DNVAFGPRMRGLGRAERERKADELLELVQLPGQGARLPRELSGGMQQRVALARALANE
                     PAVLLLDEPLGALDRKLREELQRELRRVHQRLGTTFIYVTHDQEEAFGLADRLAVMRD
                     GRLVQVGDPGDVYDNPASAWVAKFLGSTNSVAATLGAAGSLVSDVGPLVAGRIDPALS
                     PGDRVVAIVRPETTRIERRSIGDGPNRLAGRLVDAVTVGAALRLKAVTANGHAFEAVA
                     SRSGQPLDGLAPGDAVSISFDADSLRVYPEERGTSHQVSSPERSSIHV"
     gene            1327..>1574
                     /locus_tag="VHZ56_07355"
     CDS             1327..>1574
                     /locus_tag="VHZ56_07355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297823.1"
                     /translation="MSRTSRISRRSLLAMMGAAPAAAALSPLLSRAAFAAGTGALNIY
                     SWPDYFSTDDLAAYAQKSGVTPNIVTYNADEIMFSKVN"
BASE COUNT          236 a          583 c          501 g          254 t
ORIGIN      
        1 gcgcagcacc ggtgcgcctc ggacgcggcc ggtttttctc gcggccgcgg cccctttcaa
       61 ttgcgcggcg tgacccgcaa agcatttctg cgctaggttg ggttcgggca aaacaactct
      121 accaaatcgg tagacatgcg cggtgcgcag tctacgatcc gcgcaatcct ggtgcgaccc
      181 gtaaaatgtc cgcgtctgtt tctccctccg ccggtcaggc ggtctcgctc cgcgcgctca
      241 ccaagagctt cggcggccga cctgtgctgt ccgatctgac gctcgaaatc ggcgccggcg
      301 aattccttgc ggtgctcggc ccctccggta gcggcaagac cacgctgatg cgcatcattg
      361 ccggcttcga ggcgcccgac agcggcagcg tcgcgatcgg cggcaccgac gtgaccgacc
      421 tgccggccga gcgccgcaac gtcaacacgg tgttccagag ctacgcgctg ttcccgcatc
      481 tgtcggtgct cgacaatgtc gcgttcggcc cgcgcatgcg gggcctcggg cgggccgagc
      541 gcgagcgcaa ggcggacgaa ctgctcgaac tggtgcagtt gcccggccag ggcgcgcgcc
      601 tgccgcgcga gctgtcgggc ggcatgcagc agcgcgtcgc ccttgcccgt gccctcgcca
      661 acgagccggc ggtcctgctg ctcgatgagc cgctcggcgc cctcgaccgc aagctccgcg
      721 aggaactgca gcgcgaattg cgccgcgtcc accagcggct cggcaccacc ttcatctacg
      781 tgacccacga ccaggaagag gccttcggtc tggcggaccg gctggcagtg atgcgcgacg
      841 gacgcctggt gcaggtcggc gaccccggcg acgtgtacga caatccggcg agcgcctggg
      901 tggccaaatt cctcggcagc accaacagcg tcgcggcgac gctgggggcc gccggcagcc
      961 tcgtctccga tgttggtccc ctcgtcgccg gccgtatcga cccggcgctc tcgcccggcg
     1021 atcgggtggt cgccatcgtg cggcctgaaa ccacccggat cgaacgtcgc tccattggcg
     1081 acggaccgaa ccggctcgcc ggccggctcg tcgatgccgt caccgtcggc gccgcgctgc
     1141 gcctcaaggc ggtgaccgcc aacggtcacg ccttcgaggc ggtcgcgagc cgcagcggcc
     1201 aaccgttgga cggactcgct cccggcgacg ccgtctcgat cagtttcgac gccgactcgc
     1261 tccgggtcta cccggaagag cgcggtactt cccatcaagt ctcctctcca gaaaggtcat
     1321 cgatccatgt ctaggacatc ccgcatcagc cgccgttcgc tgctggccat gatgggcgcc
     1381 gcgcctgccg cggcggcgct ctccccgctg ctctcgcggg ccgccttcgc cgccggcacc
     1441 ggcgccctca acatctacag ctggccggac tatttctcga ccgacgatct ggcggcctac
     1501 gcgcaaaaga gcggcgtcac gcccaacatc gtcacctaca acgccgacga gatcatgttc
     1561 tccaaggtca acag
//
LOCUS       DATAZA010000291         2966 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1190511, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000291 DATAZA010000000
VERSION     DATAZA010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2966
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1190511"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            102..1346
                     /gene="tyrS"
                     /locus_tag="VHZ56_07360"
     CDS             102..1346
                     /gene="tyrS"
                     /locus_tag="VHZ56_07360"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEX4297824.1"
                     /translation="MMPFKSEFLRILEERGFIHQVSDPDGLDAKFLAGPVAAYIGFDA
                     TAQSLHVGHLIQVMLLYWLQQTGNKPISLMGGGTTMIGDPSFKDEARPLLTAEAIDAN
                     IGRLRQIFGKLLRYGDGPADALMVNNADWLLKLNYVEFLRDVGRHFSVNRMLSFESVK
                     LRMEREQSLSFLEFNYMILQGYDFVELNRRYGVILQMSGSDQWGNIINGVELSHRMGG
                     PQLYALTSPLLTTASGQKMGKTAAGAVWLNEAMLSPYEFWQYWRNVEDADVERFFKLY
                     TPLPLPEVAAIMAGDINDAKKALATAVTAMVHGHDAAVQSAETARATFEQGALDLSLP
                     TVEVPRADLVAGLGIQAALVLAGLVASNGEARRSIQGGAVRLNDQPVTDERLMLNETS
                     LMPEGVIKLSVGRKKHTLLRAV"
     gene            complement(1343..1645)
                     /locus_tag="VHZ56_07365"
     CDS             complement(1343..1645)
                     /locus_tag="VHZ56_07365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018264956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEX4297825.1"
                     /translation="MKARRVLYHPEARADLDRILDWLAGSASPLAAIGIIEDLEGFIG
                     RLDLAAERGTRRDDLRPNLRILGHGNATIAVAVDERTVYILRIFYGGQDWEAAMKV"
     gene            complement(1642..1923)
                     /locus_tag="VHZ56_07370"
     CDS             complement(1642..1923)
                     /locus_tag="VHZ56_07370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007566685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HEX4297826.1"
                     /translation="MAKVVKRTFSLTEEQAKFIDRKVDEGQFASGSEVVRQGIRAVQE
                     RDVAIERWLREEVVPIYDRVMAGEEKLLTPEDVRRGLQRKYQKLAKAAE"
     gene            complement(1977..>2966)
                     /locus_tag="VHZ56_07375"
     CDS             complement(1977..>2966)
                     /locus_tag="VHZ56_07375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297827.1"
                     /translation="DSKKGLQSAELTNFALSPGDAAQVSVTPLSGGYQVRIHGDQLDL
                     KPMLKKFFSLDQGSGGPQATSFTQTIALDVDLKRALGFYKTTAYNVALDLALKGSDLK
                     KVSLQTQLGGNSSLSVATNPTSDGRTLSVVFNDLGSVLRLVGVYGQVEGGSGTLVLQQ
                     NPDTKVDTGEFTLKNFAIVDEKNIAQILQSRADAEQLFSGGSQLTFSAGKVEFVHRVD
                     RVEVTDAVLSGDSIGGEAKGFIYTNSKQYDLTGTVIPMFGLNNAFGRLFGPLGGGVNG
                     GLFGVTFAIKGPLATPQFKINPMSALAPGAFRSLFEFRAKEQPLQDDDAADGN"
BASE COUNT          507 a          968 c          960 g          531 t
ORIGIN      
        1 ggcgccaacc atttctacga gggcaagatc gacgagctga ccgagcgctg cgccgaatat
       61 ctcgaccgcc gccgcgccga catcgccgcg ggcaagggcc gctgatgccg ttcaagtccg
      121 aattcctgcg catcctcgag gagcgcggat tcatccacca ggtctcggac ccggacggac
      181 tggacgccaa attcctcgcc ggccccgtcg ccgcctatat cggcttcgac gcgacggcgc
      241 agagcctcca tgtcgggcac ctgatccagg tgatgctgct ctactggctg cagcagaccg
      301 gcaacaagcc gatctcgctg atgggcggcg gcacgacgat gatcggcgat ccctcgttca
      361 aggacgaggc ccggccgctg ctgacggccg aggcgatcga cgccaacatc ggcaggctca
      421 ggcagatctt cggaaaactg ctgcgctacg gcgacggacc ggccgacgcg ctgatggtca
      481 acaatgccga ctggctgctg aagctcaact atgtcgaatt cctgcgcgac gtcgggcggc
      541 atttctccgt caaccgcatg ctgtcgttcg agtcggtcaa gctgcgcatg gagcgcgagc
      601 aatcgctgag ctttctcgag ttcaactaca tgatcctgca gggttatgac ttcgtcgagc
      661 tgaaccggcg ctacggcgtc atcctgcaga tgtcgggctc cgaccagtgg ggcaacatca
      721 tcaacggtgt cgaactcagc caccgcatgg gcggcccgca gctctatgcg ctgacctcgc
      781 cgctgctgac cacggcgtcg ggccagaaga tgggcaagac cgccgccggc gcggtgtggc
      841 tcaacgaggc gatgctcagc ccctacgagt tctggcagta ctggcgcaac gtcgaggacg
      901 cggacgtcga gcggttcttc aagctctaca cgccgctgcc gctgccggag gtcgccgcga
      961 tcatggccgg cgacatcaac gacgccaaga aagcgctggc gacggcggtg acggcgatgg
     1021 tgcatggcca cgacgccgcg gtgcaatcgg cggagaccgc ccgggccacc ttcgagcagg
     1081 gagcgctcga cctgagcctg cccacggtcg aggtgccgcg cgccgatctc gttgccggcc
     1141 tcggcatcca ggcggcgctg gtgctggcag gtctggtcgc ctccaacggc gaagcccgcc
     1201 ggtcgatcca gggcggcgcc gtgcggctca acgaccagcc ggtgaccgac gagcgcctga
     1261 tgctgaacga aaccagcctg atgccggaag gcgtcatcaa gctcagcgtc ggccgcaaga
     1321 agcacaccct gctccgggcg gtttagacct tcattgccgc ttcccagtcc tggccgccgt
     1381 agaagatgcg caggatgtag accgtccgct cgtcgacggc gacggcgatc gtcgcgttgc
     1441 catggccaag aattctgagg tttggccgca aatcgtcgcg gcgtgtgccg cgttcggcag
     1501 caagatcgag cctgccaatg aagccttcca aatcctcgat gatgccgatg gctgcaagcg
     1561 ggcttgccga accggcgagc cagtctagaa ttctgtcgag atccgctcgc gcctccggat
     1621 gatagaggac gcgccgcgct ttcattcggc cgccttggcc agcttctggt acttccgctg
     1681 caatccgcgg cggacgtctt cgggagtcag tagcttttcc tctccagcca tgacccgatc
     1741 atagatcgga accacttcct cacgcagcca tcgttcgatc gcaacatcgc gctcctgcac
     1801 cgcgcggatt ccctgacgca ccacttcgct cccggaagcg aactgtccct catcgacctt
     1861 ccggtcgatg aatttggcct gctcttcggt caggctgaag gtgcgcttaa cgactttggc
     1921 catgccggac tcctctgccc cgcgaccata gcaaacggta tgactatttc ataccgctag
     1981 ttcccgtcgg ccgcgtcgtc gtcctgcagc ggctgctcct tggcgcggaa ttcgaacagc
     2041 gagcggaagg cgccgggggc cagcgccgac atcgggttga tcttgaactg cggcgtggcg
     2101 agcgggccct tgatggcgaa ggtcacgccg aacagtccgc cgttgacgcc gccgccaagc
     2161 ggcccgaaca gccggccgaa ggcgttgttg agcccgaaca tcgggatgac ggtgccggtc
     2221 aggtcgtact gcttggaatt ggtgtagatg aagcccttgg cctcgccgcc gatgctgtcg
     2281 cccgaaagca ccgcatcggt cacctcgacg cggtcgacgc gatggacgaa ttccaccttg
     2341 ccggcgctga acgtcagctg gctgccgccg ctgaacagct gttccgcgtc ggcgcgcgac
     2401 tgcaggatct gggcgatgtt cttttcgtcg acgatggcga agttcttgag ggtgaactcg
     2461 ccggtatcga ccttggtgtc ggggttctgc tgcagcacga gggttcccga accgccctcc
     2521 acctggccat agaccccgac gaggcgcagc accgagccca ggtcgttgaa caccaccgag
     2581 agcgtccgcc cgtcggaggt cggattggtg gccaccgaca gcgagctgtt gccgccgagc
     2641 tgggtctgca ggctgacctt ctttaggtcg ctgcccttga gcgcgaggtc cagcgcgacg
     2701 ttgtaggcgg tggtcttgta gaagccgagg gcgcgcttca ggtcgacgtc gagggcgatg
     2761 gtctgggtga agctcgtcgc ctgcgggccg cccgagccct ggtcgaggct gaagaacttc
     2821 ttgagcatcg gcttcaggtc gagctggtcg ccatggatgc ggacctggta gccgccgctg
     2881 agcggggtga ccgagacctg cgcggcgtcg ccggggctca gcgcgaaatt ggtgagctcg
     2941 gccgactgca ggcctttctt gctgtc
//
LOCUS       DATAZA010000292         1868 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2814531, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000292 DATAZA010000000
VERSION     DATAZA010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1868
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2814531"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..502
                     /locus_tag="VHZ56_07380"
     CDS             <1..502
                     /locus_tag="VHZ56_07380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX4297828.1"
                     /translation="SQKPDWEVELGVIIGKEARYVDEKNAFDHVAGYCVSNDLSERYF
                     QNERGGQWTKGKSSDTFGPIGPWLVTADEVPDPQNLDMWLEVDGHRYQNGNTRTMVFG
                     VRTLVSYISQFMSLQPGDVISTGTPPGVGMGIKPNPVWLKPGQTMHLGIAGLGEQTQR
                     TVAYTG"
     gene            complement(511..906)
                     /locus_tag="VHZ56_07385"
     CDS             complement(511..906)
                     /locus_tag="VHZ56_07385"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006931170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX4297829.1"
                     /translation="MPLPIRHIVAAAPRPVAPFSHAVEVDGLVFVTGQMPTDPAAPDA
                     PLPAGIEAQTRRVFENLRLVLGGLGLGLEHAVMARIYLTQFERDYAALNVLWPSFFAP
                     GQLPARTTVGVTALAVGAIVEIDLVAKRP"
     gene            1068..1778
                     /locus_tag="VHZ56_07390"
     CDS             1068..1778
                     /locus_tag="VHZ56_07390"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEX4297830.1"
                     /translation="MLDWLHQFSDYLSFILQSVANNLWLSVLFIFLVCLGEAVFILGL
                     LVPSLPILLLTGGLISQGTLPFWPIYLAAVAGAVVGDAISYWLGYLFKDRIKTAWPFR
                     NYLPLITRGEEFFQKHGAAAILIGRFITGVKAVIPGVAGMLGMSWARFTLVNIVSSFI
                     WAAAHLLPGILLTGWLKSMGISLELVIVVGAIVLTVLAILVHYWKRIVLLFTPFLGDF
                     GKSLEARWRKPKADPGAQ"
BASE COUNT          302 a          678 c          569 g          319 t
ORIGIN      
        1 ttcgcagaag cccgactggg aagtcgagct cggcgtcatc atcggcaagg aggcccgcta
       61 cgtcgacgag aagaacgcct tcgaccacgt cgccggctac tgcgtcagca acgacctctc
      121 cgagcgctat ttccagaacg agcgcggcgg ccagtggacc aagggcaagt cgtccgacac
      181 cttcggtccc atcggcccgt ggctggtgac cgccgacgag gtgcccgacc cgcagaacct
      241 cgacatgtgg ctcgaagtcg acggccaccg ctaccagaac ggcaacacca ggacgatggt
      301 gttcggcgtc cgcacgctgg tcagctacat cagccagttc atgtcgctgc agccgggcga
      361 cgtgatctcc accggcactc cgcccggcgt cggcatgggg atcaagccga acccggtgtg
      421 gctgaaaccg ggccagacca tgcacctcgg cattgccggc ctcggcgagc agacgcagcg
      481 gaccgtcgcc tacaccggct agccgcagcc tcaggggcgc ttggcgacga ggtcgatctc
      541 gacgatggcg cccaccgcca gtgccgtcac gcccaccgtg gtgcgagccg gcagctgccc
      601 cggtgcaaaa aagctcggcc acagcacgtt gagcgcggca tagtcgcgct cgaactgcgt
      661 caggtagatg cgcgccatga ccgcgtgctc gagcccgagg ccaaggccgc caagcaccag
      721 cctcaggttc tcgaacaccc gccgcgtctg cgcctcgatg ccggccggca gcggggcgtc
      781 gggagccgcc ggatcggtcg gcatctgccc ggtcacgaac accagaccgt cgacctcgac
      841 ggcgtgcgag aacggcgcca cgggccgcgg cgctgcggcg acaatgtggc ggatcggcag
      901 cggcatggcg gtctcccttg catcccggat ggtgcagtcc cactgttaac gttcggatgc
      961 gacactcgac aagttgacgc gcgcccaatt ccctctagga aggcggcaat ccaccatcac
     1021 ggccggccgc acagctcgcg tcggtccgct acggccgggg agaccgcatg ctggactggc
     1081 tgcatcagtt ttcggactat ctgagcttca tcctccagag cgtcgccaac aacctctggc
     1141 tgtcggtgct cttcatcttc ctcgtctgcc tcggcgaggc cgtgttcatc ctcgggctgc
     1201 tggtcccatc gctgcccatc ctgctgctca ccggcggcct gatctcgcag ggcaccctgc
     1261 cgttctggcc gatctatctt gccgcagttg cgggtgccgt agtcggcgac gccatttcct
     1321 actggctcgg ctacctgttc aaggatcgca tcaagaccgc ctggccgttc cgcaactacc
     1381 tgccgctgat cacccgcggc gaggagttct tccagaagca cggcgccgcc gccattctca
     1441 tcggccgctt catcaccggc gtgaaggcgg tgatccccgg cgtcgccggc atgctcggca
     1501 tgtcctgggc ccgcttcacc ctcgtcaaca tcgtctcctc cttcatctgg gccgcggcgc
     1561 acctgctgcc gggcatcctg ctcactggct ggctgaagtc gatgggcatc agcctcgagc
     1621 tggtgatcgt cgtcggcgcc atcgtgctga ccgtgctcgc cattctcgtc cattactgga
     1681 agcgcatcgt cctgctgttc acccccttcc tcggcgactt cggcaagtcg ctcgaggcgc
     1741 gctggcgcaa gcccaaggcc gatccgggcg cccaatagcg cccaatccat cacgaactgc
     1801 tcactggact cgacgccgcc gcggcggcac tctgacgccc atgcgcccgc tgaaactgct
     1861 ccgtgcgt
//
LOCUS       DATAZA010000293         3731 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3164862, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000293 DATAZA010000000
VERSION     DATAZA010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3731
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3164862"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..266
                     /gene="rplQ"
                     /locus_tag="VHZ56_07395"
     CDS             <1..266
                     /gene="rplQ"
                     /locus_tag="VHZ56_07395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEX4297831.1"
                     /translation="GKRGDLHARRQAIAQMRDETQVQKLFGVIGPRYKDRQGGYIRIL
                     KAGFRYGDNAAVAVVEFVDRDTTAKGQDSGPVQEKREDADVAA"
     gene            341..1153
                     /locus_tag="VHZ56_07400"
     CDS             341..1153
                     /locus_tag="VHZ56_07400"
                     /inference="COORDINATES: protein motif:HMM:NF015527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase family 2 domain-containing
                     protein"
                     /protein_id="HEX4297832.1"
                     /translation="MLISDPHQFAFIHVPKTGGSSIRRANAAYDSYAGAFADVHEHPV
                     PGRIDLGHLPLGLLREHFPVEYEKLHRYFTLAIVRDPYSRFPSGLRQRLHWYRDPGLP
                     PPSEMTPAQVLREAYAAIELIQKQTDRLPPEIIHLAPQAPYVSEGGRLAVSALLPAEA
                     IDAAVPDLLREHLGLETTIARANHSRRYAHRSLAGLARAAGWLAGRGVPGVISRRALS
                     LTRRFQVAGNPLADVVLAQPDIRAFIETHYAADFELYEEARQRWLPGGQRQG"
     gene            1238..2278
                     /locus_tag="VHZ56_07405"
     CDS             1238..2278
                     /locus_tag="VHZ56_07405"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX4297833.1"
                     /translation="MPDPRLILVTGASGFVGKWCVIKLLEKGYRVRGTVRSDAKAALV
                     RKTVEGVVGADAAARLELVKADILADAGWPQALAGVAAVMHVATVIRADEPRDPNIVI
                     RPAVEGTERILRMAHDAGVTRFIYTSSIATVGYGHGQTSGRRVYDETYFTNLEAMRWT
                     WAYCVGKTRAERAAWAYAKANGMQMTTIHPGAIIGPALDEDASISVGLVSGLLDNATP
                     ALPSNGFSIIDVRDVADMHVAALEHPETIGQRYLATAEYTPFPKVAAILQELYPDRRI
                     VNRAVPDWVIRVVAMFGGPARQIINDIGNEKIFDGSRGEALIGHPYIGARQSIADTAE
                     SVLRLDLHVKLS"
     gene            complement(2297..3646)
                     /gene="rimO"
                     /locus_tag="VHZ56_07410"
     CDS             complement(2297..3646)
                     /gene="rimO"
                     /locus_tag="VHZ56_07410"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013214352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008172 - S-methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0018339 -
                     peptidyl-L-beta-methylthioaspartic acid biosynthetic
                     process from peptidyl-aspartic acid [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HEX4297834.1"
                     /translation="MTQAPKIGLVSLGCPKALVDSERIMTTLRAQGYAFSRDYAGADI
                     VLVNTCGFLDSAKQESLEAIGEAIAENGRVIVTGCLGVEEELIRKTHPSVLAVSGPHQ
                     YETVVNAVNAHLPPVPNKFVDLVPEAGLRLTPKHYAYMKISEGCNNRCSFCIIPQIRG
                     DLSSRPLASVLYEAERLVASGVKEIMVISQDTSAYGVDIKYASSKYRGRDVSAKFQTL
                     AEEMGKLDVWTRLHYVYPYPHVDAVIPLMAEGKILPYLDIPFQHASPDVLKRMRRPAN
                     QLKTLERIKAWRALCPDLTIRSNFIVGFPGETDEDFEFLLDWIEEAEIDRAGVFKYEP
                     VTGAPANELDGVVPDEVKDERFAQLMEVAQVVSTGQLAKKVGRTIEVLVDDVKPAEGR
                     AIARSKWDAPDIDGQVIVDHAVGIKPGDKVMVTVTGSDEYDLFAEPVGASALQPALA"
BASE COUNT          628 a         1265 c         1219 g          619 t
ORIGIN      
        1 tgggcaagcg cggcgatctg cacgctcgcc gccaggcgat cgcgcagatg cgcgacgaga
       61 cccaggtgca gaagctcttc ggcgtcatcg gcccgcgcta caaggaccgc cagggtggct
      121 atatccgcat cctcaaggcc ggcttccgct acggcgacaa cgccgcagtg gcggtggtcg
      181 aattcgtcga tcgcgacacc accgccaagg gccaggattc gggcccggtg caggaaaagc
      241 gagaagacgc cgacgtcgcc gcctaagccg gccggccgat gctgagattt aagggcgatc
      301 ctctggctgg agggtcgccc tctcgttttc ggtgccgggc atgctgatca gcgacccgca
      361 ccaatttgcc ttcatccacg tccccaagac cggcggctcc agcatccgca gggcgaacgc
      421 cgcctatgac agctatgccg gcgcctttgc cgatgtgcac gaacacccgg ttccgggccg
      481 catcgacttg gggcacctgc cactcgggtt gctgcgcgag cactttcccg ttgagtacga
      541 aaagctccat cgctatttca cattggcgat cgttcgcgat ccctattcgc ggtttccctc
      601 gggccttcgg caacgcctgc actggtaccg cgaccccggc ctgccgccgc cgagcgagat
      661 gacgcccgcc caggtgctgc gcgaggccta tgccgcgata gagttgatcc agaagcagac
      721 agatcgcctg ccgccggaaa tcatccatct cgcaccacag gcgccctatg tcagcgaagg
      781 cggccggctt gccgtcagcg ccttgcttcc ggccgaagcg atcgatgcgg ctgtgcccga
      841 cctgttgcgc gagcatctcg gcctcgagac aacgatcgcc cgcgccaacc acagccgcag
      901 atacgcccac cggagcctgg cagggctggc gcgcgccgct ggctggctgg cgggacgcgg
      961 agtaccaggc gtcatttcga ggcgagcttt gagcctgacg cggcgattcc aggttgcagg
     1021 caacccgctg gccgatgtgg tgctggctca gcccgacatc cgggcgttca tcgagacgca
     1081 ctacgccgcc gatttcgagc tttacgaaga ggcgcggcag cgctggctgc ccggcgggca
     1141 acgccagggc tgaaggagcg gccgccgcgg gcacccggca ggttttgggt ttcgcccgga
     1201 ccgtgatatc tcgcgcagcg caaaacggga cccagccatg ccagacccca gattgatcct
     1261 cgtcaccggc gcgtccggct tcgtcggcaa atggtgcgtg atcaagctcc tcgaaaaggg
     1321 ctatcgcgtc cggggcacgg tgcggtcgga tgccaaggcg gcgctcgtcc gcaagaccgt
     1381 ggagggggtc gtcggcgccg atgcggcagc gcggctggaa ctggtcaagg ccgatatcct
     1441 cgcggacgcc ggctggccgc aggcgctggc gggcgtggcg gccgtcatgc atgtcgccac
     1501 cgtcatccgc gccgatgagc cgcgcgaccc caacatcgtc atccggccgg cggtcgaagg
     1561 cacggagcgc atcctgcgga tggcgcacga tgccggcgtc acgcgcttca tctatacgtc
     1621 ctcgatcgcg accgtcggtt atggccacgg ccagaccagc gggcgccggg tctatgacga
     1681 gacctatttc accaacctcg aagccatgcg ctggacctgg gcctattgcg tcggcaagac
     1741 gcgggccgag cgcgccgcct gggcctatgc caaggccaac ggcatgcaga tgaccaccat
     1801 ccaccccgga gccatcatcg gcccggcgct cgacgaagat gcatccatct cggtagggct
     1861 ggtgtcggga ttgctggaca atgcgacgcc ggcgctgccg agcaacggct tttccatcat
     1921 cgacgtgcgc gacgtcgccg acatgcacgt cgctgccctc gagcatcccg agacgatcgg
     1981 ccagcgctat ctcgcgacgg ccgaatacac gccgttcccg aaggtcgccg cgatcctgca
     2041 ggagctctat cccgaccgcc gcatcgtcaa tcgggccgtg ccggattggg tgatccgtgt
     2101 cgtcgccatg ttcggcgggc cggcgcggca gatcatcaac gacatcggca acgagaagat
     2161 cttcgacggc agcaggggcg aggcgctgat cggccacccc tatatcggcg cccgccagtc
     2221 gatcgccgac acggccgaaa gcgtcctccg cctcgacctc cacgtcaagc tgtcgtaggg
     2281 ccggagcggc cgggagctag gccagcgccg gctgcagggc ggaggctccc accggctcgg
     2341 caaacagatc gtactcgtcc gacccggtca ccgtgaccat caccttgtcg ccgggcttga
     2401 tgccgacggc gtggtcgacg atcacctggc cgtcgatatc gggcgcgtcc catttgctgc
     2461 gggcgatcgc gcgaccctcg gccggcttca cgtcgtcgac cagcacctcg atggtccggc
     2521 cgaccttctt ggccagctgg ccggtcgaca ccacctgcgc cacttccatc agctgcgcaa
     2581 agcgttcgtc cttgacctcg tcggggacga cgccatcgag ctcgttggcc ggcgcgccgg
     2641 tcaccggctc gtacttgaac accccggcgc ggtcgatctc ggcctcctcg atccagtcga
     2701 gcaggaactc gaaatcctcg tccgtctcgc ccggaaatcc gacgatgaaa ttggagcgga
     2761 tggtgaggtc ggggcaaagc gcccgccacg ccttgatgcg ctcgagcgtc ttcagctggt
     2821 tggccgggcg gcgcatgcgc ttcagcacgt cgggcgaggc atgctggaac ggaatatcca
     2881 ggtacggcag gatcttgccc tcggccatca gcgggatgac cgcgtcgacg tgcgggtagg
     2941 gatagacgta gtggagccgc gtccacacat cgagcttgcc catctcctcg gccagcgtct
     3001 ggaacttcgc gctgacgtcg cggccacggt acttcgagct cgcatacttg atgtcgacgc
     3061 cgtaggccga cgtgtcctgc gagatcacca tgatctcctt gaccccggac gcgaccagcc
     3121 gttcggcttc gtacagcacc gaggcgaggg gacgcgagct gaggtcgccg cggatctgcg
     3181 ggatgatgca gaacgagcag cggttgttgc agccttcgga aatcttcatg taggcgtagt
     3241 gcttcggtgt cagccgcagc ccggcctcgg gcacgaggtc gacgaatttg ttgggcaccg
     3301 gcggcaaatg cgcgttcacc gcgttgacca cggtctcgta ctggtgcggg cccgagaccg
     3361 ccagcacgct cggatgcgtc ttgcggatca gctcctcttc gacccccagg cagccggtga
     3421 cgatcaccct gccattctcg gcgatggctt cgccgatggc ctcgaggctt tcctgcttgg
     3481 cgctgtcgag gaacccgcag gtgttgacga gcacgatgtc ggcgccggcg tagtcgcgcg
     3541 agaaggcata gccctgcgcg cgcagcgtcg tcatgatgcg ctcggaatca acgagggcct
     3601 tcgggcagcc gaggctgacg agcccgatct tgggtgcttg ggtcattggc gggcggatat
     3661 agcgcaaatg cccgcaaaag caatgaacgc gccactgccg gggcgcaggg caggcctgca
     3721 aaccctcaca t
//
LOCUS       DATAZA010000294         2098 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1771727, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000294 DATAZA010000000
VERSION     DATAZA010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2098
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1771727"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1476
                     /gene="nuoL"
                     /locus_tag="VHZ56_07415"
     CDS             <1..1476
                     /gene="nuoL"
                     /locus_tag="VHZ56_07415"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEX4297835.1"
                     /translation="GAAGKTIHFLSWDWDAMTVVCLLLFMGAMGKSAQFLLHTWLPDA
                     MEGPTPVSALIHAATMVTAGVFMVARLSPMFDASPTAMAVVFVEGAITAFFAATIGLV
                     QNDIKRVIAYSTCSQLGYMFVALGSGVYSAGIFHLFTHAFFKALLFLGAGSVIHAMHH
                     EQDMRNMGGLAKKIPITYWMMLIGTLALTGVGIPGTPLGFAGFFSKDSIIESAYSVGG
                     NLGTFGFWSLVIAACFTSFYSWRLIHLTFHGTPGDILHAGTATPHFDEGDNNAHDEPL
                     DSDNAHQHAASAHEEQGHAHGSAYDHAHESPPVMLWPLYILGAGAVLAGAVFSGYFFA
                     NPDTVSGFFKGALVVVTDRYEAAHAVPLWASWSATIAMLIGFGVAWYMYVVDKTAPAR
                     LAAANPGLYRFLLNKWYFDELYDTIFVRPAFWLGNAIWKGFDDWLVDQTIVEGLGDRV
                     RDVTNRVVRLQSGYLYTYAFVMLIGVAALLTWAIVAGGLLG"
     gene            1473..>2098
                     /locus_tag="VHZ56_07420"
     CDS             1473..>2098
                     /locus_tag="VHZ56_07420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008189945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HEX4297836.1"
                     /translation="MILSDHILSLVTFLPLAGAFILMFVPGDDRGKEIARWVALIFST
                     LTFAVSLWMWAGFDNGQSGFQFVENYEWIGSSIGYRMGVDGISVLFVVLTALLTPICV
                     ISSWKPIQNRVREFMIVFLILDTLCIGVFTALDLAMFYVFFEGSLIPMFLIIGIWGGK
                     RRIQASYKFFFYTFTGSVLMLLAIMAMYWQAGTLDIRKLLAFHFDPAV"
BASE COUNT          310 a          698 c          669 g          421 t
ORIGIN      
        1 ggtgccgccg gcaagaccat ccacttcctc agctgggact gggacgcgat gacggtggtc
       61 tgcctgctgc tgttcatggg cgcgatgggc aagtcggcgc agttcctgct ccacacctgg
      121 ctgccggacg cgatggaagg cccgacgccg gtcagcgcgc tgatccacgc cgcgaccatg
      181 gtgaccgccg gcgtgttcat ggtggcgcgg ctgtcgccga tgttcgacgc ctcgccgacg
      241 gcgatggccg tggtgttcgt cgaaggcgcc atcacggcgt tctttgcggc gacgatcggg
      301 ctggtgcaga acgacatcaa gcgggtcatc gcgtactcga cctgctcgca gctgggctac
      361 atgttcgtgg cgctcgggtc cggcgtctat tcggccggca ttttccacct gttcacccac
      421 gccttcttca aggcgctgct gttcctcggc gccggttcgg tcatccacgc gatgcaccac
      481 gagcaggaca tgcggaacat gggcgggctg gcgaagaaaa tccccatcac ctactggatg
      541 atgctgatcg gcaccttggc gctgaccggc gtcggcatcc cgggcacgcc gctcggcttc
      601 gccgggttct tctccaagga ttcgatcatc gagagcgcct attccgtcgg cggcaacctc
      661 ggcaccttcg gcttctggtc gctggtgatc gcggcgtgct tcaccagctt ctattcgtgg
      721 cggctgatcc acctgacgtt ccacggcacg cccggcgaca tcctccatgc cggcaccgcg
      781 acgccgcatt tcgacgaggg cgacaacaac gcgcacgacg agccgctcga cagcgacaac
      841 gcgcaccagc acgccgcctc ggcgcacgaa gagcagggcc acgcgcacgg cagcgcctat
      901 gaccacgcgc acgaaagccc gccggtcatg ctctggccgc tctacatcct cggtgccgga
      961 gcggtgctcg cgggtgcggt gttcagcggc tatttcttcg ccaatcccga caccgtcagc
     1021 ggcttcttca aaggcgcgct ggtggttgtg accgaccgct acgaagcggc gcatgcggtg
     1081 ccgctgtggg ccagctggtc ggcgacgatc gccatgctga tcgggttcgg cgtcgcgtgg
     1141 tacatgtacg tggtcgacaa gaccgcgccg gcgcgcctcg cggccgccaa tcccgggctc
     1201 taccggttcc tgctcaacaa gtggtacttc gacgagctct acgacaccat cttcgtgcgg
     1261 ccggccttct ggctcggcaa cgcgatctgg aagggcttcg acgactggct ggtcgaccag
     1321 accatcgtcg agggcctcgg cgaccgggtg cgggatgtga ccaaccgcgt ggtgcggctg
     1381 cagtcgggct acctctacac ttatgccttc gtcatgctga tcggggtcgc tgccctgctc
     1441 acctgggcga tcgttgccgg agggctgctg ggatgatcct ttccgaccac atcctcagcc
     1501 tcgtcacctt cctgccgctc gccggcgcgt tcatcctgat gttcgtgccg ggcgacgacc
     1561 gcggcaagga aatcgcgcgc tgggtggcgc tgatcttttc gacgctgacg ttcgccgtct
     1621 cgctgtggat gtgggccggc ttcgacaacg gccagtccgg attccagttc gtcgagaact
     1681 acgagtggat cggctcgtcg atcgggtacc ggatgggcgt cgacggcatc tcggtgctgt
     1741 tcgtggtgct gacggcgctg ctgacgccga tctgcgtgat ctcgagctgg aagccgatcc
     1801 agaaccgcgt gcgcgagttc atgatcgtct tcctgatcct cgacacgctc tgcatcggcg
     1861 tgttcacggc gctcgacctg gcgatgttct acgtgttctt cgagggcagc ctgatcccga
     1921 tgttcctcat catcggcatc tggggcggca agcggcgcat ccaggcctcc tacaaattct
     1981 tcttctacac cttcaccggc tcggtgctga tgctgctcgc catcatggcg atgtactggc
     2041 aggcgggcac gctcgacatc cgcaagctgc tggcgttcca cttcgatccg gcggtgca
//
LOCUS       DATAZA010000295         7142 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3049192, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000295 DATAZA010000000
VERSION     DATAZA010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 7142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7142
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3049192"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..821)
                     /locus_tag="VHZ56_07425"
     CDS             complement(<1..821)
                     /locus_tag="VHZ56_07425"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX4297837.1"
                     /translation="MAVPLDLDQLQSFCAIADCGSFTEAARRVNKTQSAVSMQIKRLE
                     ERLGHALLSRDGRGVSLTQHGEALYARARKMLRINAEIMDEFSDEDLSGAIRFGLPDD
                     YAVRLLPVILSSFQKTHPKIMIDVTCASSQTLLEGMKRGKHDIIVFTQGTNHEYGELF
                     RTEPMFWVAAQGGQALNMDPMPIAGGQPCCWKDNAVEALERIGRDYRVAYTSCNALGI
                     ASAVLTDLAVGFLPESALQPGMLAISEDRNLPRLRDAEIALMRSSHAYGGIYDALA"
     gene            975..1229
                     /locus_tag="VHZ56_07430"
     CDS             975..1229
                     /locus_tag="VHZ56_07430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297838.1"
                     /translation="MALVLSGERPAAAAVLVNPLHLVGEWFAKLRTRNAQRQALADLL
                     NLESCRLDDLGINRGDLFDALQARRATRLLGERRALRHHY"
     gene            complement(1346..1831)
                     /locus_tag="VHZ56_07435"
     CDS             complement(1346..1831)
                     /locus_tag="VHZ56_07435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HEX4297839.1"
                     /translation="MAAALLGLSLCASPLPGLAQGVVKAQYGDWQMSCDTPPGASFQQ
                     CAIIQNVTAEDQPNVGLSVIVLKTADQKARLLRVLAPLGVLLPNGLGLNIDGTDMGRV
                     AFVRCLPNGCVAEVVMDDALLKQLSTGKTAIFVVFKTPEEGIGIPVSLNGFADGFKQL
                     P"
     gene            2216..3100
                     /gene="coxB"
                     /locus_tag="VHZ56_07440"
     CDS             2216..3100
                     /gene="coxB"
                     /locus_tag="VHZ56_07440"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HEX4297840.1"
                     /translation="MGAAAALAPGLALADTGQPRPGEIGFQDSVTPIMDSIHAFHNGI
                     LLWTAILISVLVLVLLLIIVFRFNARANPVPSRVTHNTLIEVIWTVLPIVILVIIFIP
                     SMAVLNDQLVIPDGVRKYLGADIFSFGSVDVPAPGLTIKATGSQWYWSYDYPDYGDKH
                     FDSIILDEKTRLAQNPVQPRLLAVDNMLIVPVDTTVRVEVTGADVIHSFAMPSFGIKI
                     DAVPGRLNETWFNARKEGVFYGQCSQLCGKDHAFMPIAIRVVSQDTFKAWLAALKAGS
                     VDDANKTLPPLTAADTSA"
     gene            3135..4832
                     /gene="ctaD"
                     /locus_tag="VHZ56_07445"
     CDS             3135..4832
                     /gene="ctaD"
                     /locus_tag="VHZ56_07445"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019856990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HEX4297841.1"
                     /translation="MADTHALQAHDVPVEMAHEHHGHPTGWRRYLYSTNHKDIGTMYL
                     IFALIAGVIGTLLSGMMRLELQEPGLQIFPGLASMVYGVGADQALDAGKNLYLVFTTA
                     HGLIMIFFMVMPAMIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPASFILLITSMFV
                     DGSPNLHGAATGWTIYPPLSTTGTPGPSMDFVILSIHIAGASSILGAINFITTIFNMR
                     APGMTMHKMPLFPWAVLVTGFLLLLSLPVLAGGITMLLTDRNFGTTFFTPSGGGDPIL
                     FQHLFWFFGHPEVYILILPGFGIISHVVSTFSKKPVFGYMAMVYAMVAIGGIGFLVWA
                     HHMYTTGLSLNVQRYFVAATMVIAVPTGVKVFSWIATMWGGSVTFRPPMLFAVGFIFL
                     FTVGGVTGVILANAGADRALHDTYYVIAHFHYVLSLGAVFSIFAAWYYWYPKMFGIMY
                     SERLATWHFWLTFIGVNVIFFPQHFLGLAGMPRRYVDYPDAFAFWNRISSIGYYITFA
                     GLLVFLYLLWDSARKRIPAPANPWGEGATTLEWTLPSPPPFHQFETLPRIDAGADSH"
     gene            4845..5780
                     /locus_tag="VHZ56_07450"
     CDS             4845..5780
                     /locus_tag="VHZ56_07450"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008839347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0048034 - heme O biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HEX4297842.1"
                     /translation="MAFVDDSKIDIAAAGGARVEDYLALLKPRVMSLVVFTAIIGLLL
                     APGGINPVLGVIAILCIAVGAGGSGALNMWYDADIDAIMSRTANRPVPAGRVTRGEAL
                     AVGLICSAFSVAILGLATNWVAAAFLAFTIFFYAVIYTMWLKRATPQNIVIGGAAGAF
                     PPAIGWAAVTGDIGWPSVVLFLIIFLWTPPHFWALALYKQGDYAAAGIPMLPNVAGEK
                     ATRLQILLYSLVLVATSFAPLLIHMSGWLYAVVAAVTGLSFLYLAWRLYAAPNPLAMK
                     KVARSLFTYSLSYLFVIFLALMTDHVGQLLGWVVA"
     gene            5777..5956
                     /locus_tag="VHZ56_07455"
     CDS             5777..5956
                     /locus_tag="VHZ56_07455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297843.1"
                     /translation="MNPPANPIIQLSPEQMEARRKRQRRNATALALVLGFLVVLFYVL
                     TIVKMGPALFTTRDL"
     gene            5956..6513
                     /locus_tag="VHZ56_07460"
     CDS             5956..6513
                     /locus_tag="VHZ56_07460"
                     /inference="COORDINATES: protein motif:HMM:NF003465.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HEX4297844.1"
                     /translation="MTNTSLPAAPARKNRNIGGILFVLAVVMVGAAYAAVPLYYAFCA
                     ATGYGGTTRNAAGNPKGVIARQITVRFDANVDDSLPWQITPAKPVTDRIGSVETILFT
                     ARNLSDHAVTGQAAFNVTPDLAGSYFNKIQCFCFTQQTLKPGETVQMPVTFFVDPDID
                     KNSDLSTVSDITLSYTFYASKTKGS"
     gene            6516..>7142
                     /locus_tag="VHZ56_07465"
     CDS             6516..>7142
                     /locus_tag="VHZ56_07465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HEX4297845.1"
                     /translation="MATAAATASSGHAKPHHDYHLVKPSPWPIVGSVSAFILAIGGIL
                     FMRHVTVWVLLIGAAGVLYTMYAWWTDVVHEAQEGDHTPVVRMHHRYGMLLFIASEVM
                     FFVAWFWAYFDQFFRRADPEQYARVQFMGPAWPPNGVELFNPFHLPLFNTLLLLCSGT
                     TVTWAHHALIQGDRKGLRYGLMLTIALGLCFTCVQAIEYSRAGFSYSGD"
BASE COUNT         1098 a         2581 c         2079 g         1384 t
ORIGIN      
        1 gccagcgcgt cgtagatgcc gccataggca tggctcgacc gcatcagcgc aatttccgcg
       61 tcgcgcagcc gcggcaggtt gcggtcctcg gaaatcgcca gcattcccgg ctgcagcgcg
      121 ctctccggca aaaagccgac cgccaggtcg gtgagcaccg cactggcgat gccgagcgcg
      181 ttgcacgagg tgtacgccac ccggtagtcg cggccgatcc gctccagcgc ctcgaccgca
      241 ttgtccttcc agcagcaggg ctggccgccg gcgatcggca tcgggtccat gttcagcgcc
      301 tgcccaccct gcgccgccac ccagaacatc ggctcggtgc ggaacagctc gccatactcg
      361 tggttggtgc cctgcgtgaa cacgatgatg tcgtgcttgc cgcgcttcat cccctcgagc
      421 agcgtctgcg acgacgcgca ggtgacgtcg atcatgatct tgggatgggt cttctggaag
      481 ctcgacagga tcaccggcag cagccgcacc gcataatcgt cgggcagccc gaagcggatc
      541 gccccgctca gatcctcgtc ggagaattcg tccatgatct cggcattgat ccgcagcatc
      601 ttgcgggccc gcgcgtaaag cgcctcgcca tgctgcgtca gcgacacgcc cctgccatcc
      661 cgtgacagga gtgcatggcc cagccgctcc tcgagccgtt tgatctgcat cgacacggcc
      721 gactgcgtct tgttcacgcg ccgcgccgcc tcggtgaagc tgccgcagtc ggcgatggca
      781 caaaagctct gcaactggtc cagatcgagc ggcacggcca tcggtgtctc catcactgat
      841 tttgatgatc cggatgaaat ctatttgtta gacgaatagg tgtcgagtcc ctattttgcc
      901 tgcatcggtc ctgcgatgga ccgaatccca tccggcaact ccctgtcgga ccacgcaaaa
      961 tctggagaag acctatggcg ctcgtgcttt cgggcgagcg gcctgccgcc gctgccgtcc
     1021 tcgtcaaccc gctgcatctc gtcggcgaat ggtttgccaa attgcggacg cgcaacgccc
     1081 agcgacaggc actggcggat cttctcaacc tcgaatcctg ccggctggac gatctcggca
     1141 tcaaccgcgg cgacctgttc gacgcgctgc aggcccggcg cgccacccgt ctgctcggcg
     1201 agcgccgcgc gctgcgccac cactactgac cagtttcggc tgcccgggcc atctcccgga
     1261 caccggatcg gccgctgcca ggcggcctgt ttcctgacaa ctgccggacc ttcgggtccg
     1321 gctttcttgc tttgcagggg tcgccttacg gcagctgttt gaagccgtcc gcgaagccgt
     1381 tcagcgacac cggaatgccg atgccttcct cgggcgtctt gaacaccacg aagatcgcgg
     1441 tcttgccggt actcaattgc ttgagcagcg cgtcgtccat caccacttcg gcgacgcagc
     1501 cattgggcag gcagcgcacg aacgccaccc ggcccatgtc ggtgccgtcg atgttgagtc
     1561 ccaggccgtt gggcagcagc acgccgagcg gcgccaatac ccgcagcagc cgggccttct
     1621 ggtcggcggt cttcagcacg atgacgctca ggccgacatt gggctggtcc tcggccgtca
     1681 cgttctggat gatggcgcat tgctggaagc tcgcccccgg cggggtgtcg cagctcatct
     1741 gccagtcgcc gtactgcgcc ttgaccacgc cctgcgcgag gccggggagg ggggacgcgc
     1801 acaggctcag gcccagcagg gcagccgcca accgggcgct gttccggaac gtcacgatcg
     1861 agccttctcc atgccttgcg gcgccgcatc cgagggctgc cgcctagtta gccgccgcgc
     1921 cccgcgctgg caatggcgga caacaacagg cggtgacaaa caaggcaccc atgaggcagc
     1981 catccgccgg tcgcggcgaa cattttgacg cacgacgcgc ggctgtggcg gaattgcgtt
     2041 gccgggggcg atatgattta gctcaagccc aagtcagcgc tccgtgatcg agtcggggcg
     2101 gcgttcttta tgccgcgcat tgcctcctcg attctgccgg cgccgacagc gggcgaacgg
     2161 aatctcaagg gggttatagg tggccggtca gtacttccgc tctttcggga tcgcgctggg
     2221 cgccgccgca gccctggcgc cggggctggc cctggcggac accggtcagc cgaggcccgg
     2281 cgagatcggc ttccaggact ccgtcacccc gatcatggat tcgatccatg ccttccacaa
     2341 cggcatcctg ctgtggaccg cgatcctgat ctcggtgctc gtcctcgtgc tgctgctgat
     2401 catcgttttc cgcttcaacg cccgcgccaa tccggtgccg tcgcgcgtca cccacaacac
     2461 gctgatcgag gtgatctgga cggtgctgcc gatcgtcatc ctcgtcatca tcttcatccc
     2521 ctcgatggcc gtgctcaacg accagctggt gatccccgac ggggtacgca aatacctcgg
     2581 cgccgacatc ttttcgttcg gctcggtcga cgtccccgcg ccgggcctca ccatcaaggc
     2641 taccggctcg cagtggtact ggagctacga ctaccccgat tatggcgaca agcatttcga
     2701 cagcatcatc ctcgacgaga agacccgcct cgcgcagaat cccgtgcagc cgcggctgct
     2761 cgccgtcgac aacatgctga tcgtgccggt cgacaccacc gtgcgcgtcg aggtcaccgg
     2821 cgccgacgtc atccactcgt tcgccatgcc gtccttcggc atcaagatcg acgccgtccc
     2881 cggccgcctc aacgagacct ggttcaacgc ccgcaaggaa ggcgtgttct acggccagtg
     2941 ctcgcagctg tgcggcaagg atcacgcctt catgcccatc gccatccggg tcgtctcgca
     3001 ggataccttc aaggcctggc tggcggcgct gaaggccggc tcggtcgacg acgccaacaa
     3061 gaccctgccg ccgctgaccg ccgccgacac ctccgcctga gcgttgctgg aacttagata
     3121 ggaaactgcc gaagatggcc gatacgcacg cgcttcaagc ccatgacgtt ccagttgaga
     3181 tggcgcatga gcaccacggc cacccgaccg gctggcggcg ctacctgtat tcgacgaacc
     3241 ataaggacat cggcacgatg taccttatct tcgccctgat cgccggcgtc atcggcacgc
     3301 tgctctcggg catgatgcgg ctcgagctgc aggagcccgg cctgcagatc ttcccggggc
     3361 ttgcctcgat ggtatacggc gtgggggctg atcaggccct cgacgccggc aagaacctct
     3421 atctggtgtt caccaccgcc cacggcctga tcatgatctt cttcatggtc atgccggcca
     3481 tgatcggcgg cttcggcaac tggttcgtgc cgctgatgat cggggcgccc gacatggcgt
     3541 tcccccgcat gaacaacatt tccttctggc tgctgccggc gtccttcatc ctgctcatca
     3601 cctcgatgtt cgtcgacggc tcgcccaatc tgcatggcgc cgccaccggc tggaccatct
     3661 atccgccgct ctcgaccacc ggcacgcccg gcccgtcgat ggatttcgtc atcctctcga
     3721 tccacatcgc cggcgcctcc tcgatcctcg gcgccatcaa tttcatcacc accatcttca
     3781 acatgcgtgc ccccggcatg accatgcaca agatgccgct gttcccgtgg gcggtgctgg
     3841 tgaccggctt cctgctgctg ctgtcgctgc cggtgctcgc cggcggcatc accatgctgc
     3901 tgaccgaccg caatttcggc accaccttct tcaccccgtc gggcggcggt gacccgatcc
     3961 tgttccagca cctcttctgg ttcttcggcc accccgaggt ctacatcctc attctccccg
     4021 gcttcggcat catcagccac gtcgtctcga ccttctccaa gaagcccgtg ttcggctaca
     4081 tggcgatggt ctacgccatg gtcgccatcg gcggcatcgg cttcctcgtg tgggcccacc
     4141 acatgtacac cacgggcctc agcctgaacg tgcagcgcta cttcgtcgcc gccaccatgg
     4201 tgatcgcggt gccgaccggc gtgaaggtgt tctcgtggat cgccaccatg tggggcggct
     4261 cggtgacctt ccgtccgccg atgctgttcg ctgtcggctt catcttcctg ttcaccgtcg
     4321 gcggcgtgac cggcgtgatc ctcgccaacg ccggcgccga ccgcgccctg cacgacacct
     4381 actacgtgat cgcgcacttc cactacgtgc tgtcgctggg cgccgtgttc tcgatcttcg
     4441 cggcctggta ctactggtac cccaagatgt tcggcatcat gtacagcgag cggctggcca
     4501 cctggcactt ctggctgacc ttcatcggcg tcaacgtcat cttcttcccg cagcacttcc
     4561 tcggcctggc cggcatgccg cggcgctatg tcgactatcc cgacgccttc gccttctgga
     4621 accgcatttc atcgatcggc tactacatca ccttcgccgg cctgctggtg ttcctctatc
     4681 tgctgtggga ttcggcgcgc aagcgcatcc cggcgcccgc caatccgtgg ggcgagggtg
     4741 caaccacgct cgagtggacc ctgccgtcgc cgccgccgtt ccaccagttc gagacgcttc
     4801 cgcgcatcga tgccggtgcg gacagccact aagggacagg acgggtggcc ttcgttgacg
     4861 acagcaagat cgatatcgcc gcagccggcg gggcgcgcgt agaggattac ctcgcgctcc
     4921 tcaagccgcg ggtgatgtcg ctcgtcgtct ttaccgccat catcggcctg ctgctggcgc
     4981 cgggcggcat caacccggtg ctcggcgtca tcgccatcct ctgcatcgcg gtcggcgccg
     5041 gcggctccgg cgccctcaac atgtggtacg acgccgacat cgacgcgatc atgagccgca
     5101 ctgccaaccg cccggtcccg gccggccggg tgacccgcgg cgaggcactg gcggtcggcc
     5161 tcatctgctc ggcgttctcg gtcgcgatcc tggggctcgc gaccaactgg gtcgcggcag
     5221 cgtttctcgc cttcaccatc ttcttttacg ccgtgatcta cacgatgtgg ctgaagcggg
     5281 cgacgccgca gaacatcgtc atcggtggcg ccgccggcgc cttcccgccg gcgatcggct
     5341 gggccgccgt taccggcgac atcggctggc cgtcggtcgt gctgttcctc atcatcttcc
     5401 tctggacgcc gccgcatttc tgggcgctgg cgctttacaa gcagggcgac tacgccgccg
     5461 ccggcatccc catgctgccc aacgtcgccg gcgagaaggc gacgcggctg cagatcctgc
     5521 tctattcgct ggtcctcgtg gccaccagtt tcgcgccgct cctcatccac atgtcgggct
     5581 ggctctacgc cgtcgtcgcc gcggtcaccg gcctgtcgtt cctctacctc gcctggcggc
     5641 tctacgcggc gccgaacccg ctcgccatga agaaggtggc gcgcagcctg ttcacctatt
     5701 cgctgagcta tctgttcgtc atcttcctcg cgctgatgac cgatcatgtc ggccagctgc
     5761 tcggctgggt ggtcgcgtga acccgcccgc caatcccatc atccagctct cgccggagca
     5821 gatggaggcc cgccgcaagc ggcagcgccg caacgccacc gcgctcgcac tggtgctcgg
     5881 cttcctcgtg gtcctgttct acgtgctgac catcgtcaag atggggcccg ctctgttcac
     5941 tacccgggat ctctgatgac caacacctcg ctgcctgccg ccccggcccg taagaatcgc
     6001 aacattggcg gcatcctctt cgtgctcgcg gtggtgatgg ttggcgccgc ctacgccgcc
     6061 gtcccgctct actacgcgtt ctgcgccgcc accggctatg gcggcaccac ccgcaatgcc
     6121 gccggcaatc ccaagggcgt catcgcccgg cagatcacgg tgcgcttcga cgccaatgtc
     6181 gatgacagcc tgccctggca aattaccccc gccaagcccg tgaccgaccg catcggctcg
     6241 gtcgagacca tcctgttcac cgcccgcaat ctttcggacc atgcggtcac cggccaggcc
     6301 gcgttcaacg tcacgcccga tctcgccggc agctatttca acaagatcca gtgcttctgt
     6361 tttacccagc agacgctgaa gccgggcgag accgtgcaga tgcccgtgac attcttcgtc
     6421 gatcccgata tcgacaagaa cagcgatctg tcgacggtct ccgacatcac cctgtcctat
     6481 acgttctacg cctcgaaaac caagggaagc tgatcatggc caccgccgcc gcgaccgcct
     6541 catccggaca cgccaagccc caccacgact accacctggt caagcccagc ccgtggccga
     6601 tcgtcggctc cgtctccgcc tttatcctgg ccatcggcgg catcctgttc atgcgccacg
     6661 tcaccgtgtg ggtgctgctg atcggcgccg ccggcgtgct ctacaccatg tatgcgtggt
     6721 ggaccgacgt cgtgcacgag gcgcaggaag gcgaccacac cccggtcgtg cgcatgcacc
     6781 atcgctacgg catgctgctg ttcatcgcct cggaggtgat gttcttcgtc gcctggttct
     6841 gggcctattt cgatcagttc ttccgtcgtg ccgatcccga gcagtacgcc cgcgtgcagt
     6901 tcatggggcc ggcctggccg cccaacggcg tcgagctgtt caacccgttc cacctgccgc
     6961 tgttcaacac gctgctgctg ctctgctccg gcacgaccgt cacctgggcc caccacgcgc
     7021 tcatccaggg cgatcgcaag ggcttgcgct acggcctcat gctgaccatc gccctcggcc
     7081 tctgcttcac ctgcgtccag gccatcgagt actcgcgcgc cggcttctcc tattccggcg
     7141 ac
//
LOCUS       DATAZA010000296         4798 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1424485, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000296 DATAZA010000000
VERSION     DATAZA010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4798
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1424485"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2297)
                     /locus_tag="VHZ56_07470"
     CDS             complement(<1..2297)
                     /locus_tag="VHZ56_07470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX4297846.1"
                     /translation="MPSLRISQKLPLALVGSAIVVAAGVGIASYMLASNALETQARQN
                     LDTIAFERANQLSIYLQSIETDLVTTANAEYVQQAVTNFAAAFAGMTNAQLNMQASTT
                     LQKAFLQGDPALRINVDNTPGGVQSGVPAAYGFNHSHYNPMFRAQIQGQGYQDLYLLD
                     LTGNVVYSTAKNDDFAANLGKDGGGKYAGSGLAMAYQQAMAGQASTDFAFVDFAPYAP
                     AGSVPTAFLAAPVFDQTTKARVGVIAFALTPERIDRVISYRQGLGQTGDTVIVGTDGL
                     ARSDSSFTRQNDVLRPTIFDDVIKAAVTGVPGDTESADFRGADVIAAAAPADITGTQS
                     WALVAVMNKSEIFAPVTMLTTLMLAIGGGLLLVIAVLGWLFARTVSQPITRLTQGMKE
                     LAAGDLGVEIAAGKRRDEIGDMADAVEVFRANAQQVRDMSEDERASSERRQQERAEMM
                     QALQRAFGDVVDAAVKGDFSRRVPAEFPDAELNSLARSVNNLVETVERGLGETGEVLA
                     ALARTDLTRRMTGDYDGAFGQLRDDTNGVCDTLSEIVQGLRHTSRALKTATGEMLSGA
                     NDLSQRTTKQSATIEETSAAMEQLAHTVHDNAKRAESASAKARAVSQTATEGGTVMSR
                     ATEAMERITQSSGKISNIIGLIDDIAFQTNLLALNASVEAARAGEAGKGFAVVAVEVR
                     RLAQSAAQASSEVKGLIEQSGTEVRGGSKLVAEAAQKLVAMLEAAKESSGLIEGIASA
                     SREQASAIEEVTSAVRTLDEMTQHNA"
     gene            complement(2426..>4798)
                     /locus_tag="VHZ56_07475"
     CDS             complement(2426..>4798)
                     /locus_tag="VHZ56_07475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX4297847.1"
                     /translation="VIGLTQGKLQAVADERARELRHFYEGVRDDLIVTAASATTAAAL
                     RDFGTGWQQLGDSGQTAILQKAYITDNPNPAGSRELYDNSDLAAGYAFTHNTYNPGFR
                     GQMDTRGYGDIYLFDPAGDLLYSVAKNADFAENFAASGSLGSTGLGQVFQAAAKLEKA
                     GQFAFVDTAPYAPNGGQPSSFVATPVFNADGQLSGVLAFAMPQAAIDALLNSTIGLGS
                     TGQVFFEGSDHLLHSDRSKTANDVLKTAYDSPEVDAALGGATAVATGEGRIDGVQLLT
                     AVAPVDFAGLRWALVTGAGKDEALAPLTQMRNLMLAIAGAVILAAAGLGYGFSRSITR
                     PIGRLTGAMADLAAGDLAVEVSGAGRQDELGAMARAVEVFRENGLKVSSLTEQERAGS
                     EQRRVERTRMMQALQAAFGEVVDAAVDGDFSKRVPATFADAEMNRLAESVNNLVETVD
                     RGLAETAGVLAGLANRDLTVRMAGEHRGAFARLQDDINAVTASLGEFVGGLQQTSSSL
                     RAATREILAGANDLSERTTKQAATIEETSATMEQLAATVAENAERAQQASVNAQAVTD
                     TAETGGAVMLKANAAMERITESSGKISSIIGLIDDIAFQTNLLALNASVEAARAGDAG
                     KGFAVVAVEVRRLAQSAARASSEVKVLIEQSGTEVRGGSKLVAEAAGKLAAMLEGARL
                     NFELLHGIARDSREQAGAIEEITVAVRALDEMTQHNAALVEETNASIDQTEAQAAELD
                     KIVDVFTLAEAPAPKPPRNDIRALKERVKQAARSYLSAGSVALDKDWSEF"
BASE COUNT          652 a         1691 c         1631 g          824 t
ORIGIN      
        1 gcgttgtgct gcgtcatctc gtcgagcgtg cgcacggccg aggtgacttc ctcgatcgcc
       61 gacgcctgct cgcggctggc actggcgatg ccctcgatca ggccgctcga ttccttggcc
      121 gcctcgagca tggcgacgag cttctgcgcc gcctcggcca ccagcttcga gccgcccctg
      181 acctcggtgc ccgattgctc gatcagcccc ttgacctcgc tcgaggcctg cgccgccgac
      241 tgcgccagcc gccgcacttc caccgcgacg acggcaaagc ccttgcccgc ctcgccggcc
      301 cgcgccgcct cgaccgaggc attgagcgcc agcaggttgg tctggaaggc gatgtcgtcg
      361 atcagcccga tgatgttgga aatcttgccc gaggactggg tgatccgctc catcgcctcg
      421 gtcgcccggc tcatcaccgt gccgccctcg gtggccgtct ggctcaccgc ccgggccttg
      481 gcgctcgccg attcggcgcg cttggcattg tcgtgcacgg tatgggcgag ctgttccatc
      541 gccgccgagg tttcctcgat cgtcgccgac tgcttggtgg tgcgctggct taggtcgttg
      601 gcgcccgaca gcatttcgcc ggtcgcggtc ttcagcgccc gcgaggtgtg gcgcaggccc
      661 tggacgatct cgctgagcgt gtcgcagacg ccattggtgt cgtcgcgcag ctgcccgaag
      721 gcgccgtcat agtcgccggt catgcggcgg gtgagatcgg tgcgggccag cgccgcgagt
      781 acctcgccgg tctcgccgag cccgcgctcg accgtctcca ccagattgtt gacgctgcgc
      841 gccaggctgt tgagctcggc atcggggaat tcggccggca cgcggcgcga gaaatcgccc
      901 ttcaccgccg cgtcgacgac atcgccgaac gcccgctgca gcgcctgcat catctcggcc
      961 cgctcctgct ggcggcgttc cgacgaggcg cgctcatcct cggacatgtc gcgcacctgc
     1021 tgggcattgg cgcggaagac ctcgacggca tcggccatgt cgccgatctc gtcgcgccgc
     1081 ttgccggcgg cgatttcgac gccgagatcg ccggccgcga gttccttcat cccctgcgtc
     1141 agccgcgtga tcggctggct cacggtgcgg gcgaacagcc accccagcac cgcgatcacc
     1201 agcagcaggc cgccgccgat ggccagcatc agcgtcgtca gcatggtgac cggcgcgaag
     1261 atctcggatt tgttcatcac cgccaccagc gcccagctct gggtgccggt gatgtcggcg
     1321 ggcgccgccg ccgcgatcac gtcggcgcca cggaagtccg ccgactcggt gtcgccgggc
     1381 acgcccgtca ccgccgcctt gatgacgtcg tcgaagatcg tcggcctgag gacgtcgttc
     1441 tgcctggtga agctcgaatc cgagcgcgcc agcccgtcgg tgccgacgat gacggtatcg
     1501 cccgtctgcc cgaggccctg ccggtagctg atcaccctgt cgatccgctc cggcgtcagc
     1561 gcgaaggcga tgacgccgac cctggccttg gtggtctggt cgaacaccgg cgccgcgagg
     1621 aacgcggtgg ggacgctgcc ggccggcgca tagggggcaa aatcgacgaa ggcgaagtcc
     1681 gtcgaggcct gtcccgccat cgcctgctgg taggccatgg cgagcccgga gccggcgtac
     1741 ttgccgccgc catccttgcc gagattggcg gcgaaatcgt cgttcttggc ggtcgaatag
     1801 acgacgttgc cggtgaggtc gagcaggtac aggtcctggt agccctgccc ctggatctgc
     1861 gcccggaaca tcgggttgta gtgcgaatgg ttgaagccgt aagccgccgg cacgccgctc
     1921 tgcacgccac ccggcgtgtt gtcgacattg atgcgcagcg ccgggtcgcc ctgcaggaac
     1981 gccttctgca gcgtcgtcga tgcctgcatg ttgagctgtg cattggtcat gccggcgaac
     2041 gccgcggcga aattggtgac cgcctgctgc acgtattcgg cattggcggt ggtgacgagg
     2101 tcggtctcga tcgactgcag atagatgctg agctggttgg cccgctcgaa ggcaatggtg
     2161 tcgaggttct gccgggcctg cgtctccagc gcattggacg ccagcatgta ggaggcgatg
     2221 ccgacgcccg ccgccaccac gatcgccgag ccgaccagcg ccagcggcag tttctgcgaa
     2281 atcctcagtg acggcatgtc ggtccccccg cgggccgggc aaagccaggc cggcgccatt
     2341 ttgctggaag gcaagactag atcagtaggg ataacgatcg gttacgtgcg gaggtgcggg
     2401 tccccggctg cccggtgcct cgggctcaga actccgacca gtccttgtcg agcgccacgc
     2461 tgccggcgct gagataggat cgggcggcct gcttgacccg ctccttgagc gcccggatgt
     2521 cgttgcgggg cggtttcggc gccggcgctt cggcgagcgt gaagacgtcg acgatcttgt
     2581 cgagctcggc cgcctgcgcc tcggtctggt cgatcgaggc attggtctcc tcgaccagcg
     2641 ccgcattgtg ctgcgtcatc tcgtcgagcg cccgcaccgc gacggtgatt tcctcgatgg
     2701 cgccggcctg ctcgcggctg tcgcgggcaa tgccgtgcag cagctcgaaa ttgaggcgcg
     2761 cgccctcgag catggccgcg agcttgccgg cggcctcggc caccagcttc gagccgcccc
     2821 tgacctcggt gcccgattgc tcgatcagca ccttgacctc ggacgacgcc cgcgccgccg
     2881 actgcgccag ccgccgcacc tcgaccgcca ccaccgcaaa gcccttgccg gcatcgccgg
     2941 cccgcgccgc ctcgaccgag gcattgaggg ccaggaggtt agtctggaac gcgatgtcgt
     3001 cgatcagccc gatgatgctg gagatcttgc ccgaggactc ggtgatccgc tccatcgccg
     3061 cgttggcctt gagcatcacc gcgccgccag tttcggcggt gtcggtcacc gcctgcgcgt
     3121 tgacgctggc ctgctgcgcc cgctcggcat tctcggcgac cgtcgccgcc agctgttcca
     3181 tcgtcgccga ggtttcctcg atcgtcgccg cctgcttggt ggtgcgctcg ctgaggtcgt
     3241 tggcgccggc gaggatttcg cgcgtcgccg cccgcagcga actcgaggtc tgctgcaggc
     3301 cgccgacgaa ttcgccgagc gaggcggtga ccgcgttgat gtcgtcctgc agccgcgcga
     3361 aggcgccgcg gtgctcgccc gccatccgca ccgtcaggtc gcgattggcg agacccgcca
     3421 gtaccccggc ggtttccgca aggccgcggt cgacggtttc gaccaggttg ttgacgctct
     3481 cggccagccg gttcatctcg gcatcggcaa aggtcgccgg cacgcgcttg ctgaaatcgc
     3541 cgtcgaccgc cgcatcgacg acctcgccga atgccgcctg cagcgcctgc atcatccggg
     3601 tgcgctcgac ccgccgctgc tccgagccgg cccgctcctg ctccgtcagc gagctgacct
     3661 tgagcccgtt ctcgcggaac acctcgaccg cccgtgccat ggcgcccagt tcgtcctggc
     3721 gcccggcgcc gctgacctcg accgcaagat cgccggcggc aagatcggcc atggcgccgg
     3781 tcagccgccc gatcggccgg gtaatcgagc gcgagaagcc atagccgagc ccggccgccg
     3841 cgaggatcac cgcgccggcg atggccagca tcaggttgcg catctgggtg agcggcgcga
     3901 gcgcctcgtc cttgcctgca ccggtcacga gggcccagcg caggccggcg aaatccaccg
     3961 gcgcgacggc cgtcagcaac tgcaccccgt cgatgcggcc ctcgccggtc gcaacggcag
     4021 tggcgccgcc gagcgcggcg tcgacttcgg ggctgtcata ggcggtcttc agcacgtcgt
     4081 tcgcggtctt gctgcggtcg ctgtgcagca gatggtcgct gccctcgaag aagacctgcc
     4141 cggtgctgcc gagcccgatg gtggaattga gcagcgcatc gatggcggcc tgcggcatgg
     4201 cgaaggcgag gacgccgctg agctggccgt cggcattgaa caccggcgtc gcgacgaaac
     4261 tcgacggctg gccgccgttc ggcgcatagg gcgcggtgtc gacgaaggcg aactgccccg
     4321 ccttctcgag ctttgccgcc gcctggaaca cctggccgag gccggtcgag ccgaggctgc
     4381 cgctagcggc gaaattctcc gcgaaatcgg cgttcttggc gacgctgtag agcaggtcgc
     4441 cggccgggtc gaacaggtag atgtcgccgt agccgcgcgt gtccatctgg ccgcgaaagc
     4501 ccggattgta ggtgttgtgg gtaaaggcgt agcccgccgc gaggtcggaa ttgtcgtaga
     4561 gctcgcggct gcccgccggg ttcgggttgt cggtgatgta ggccttctgc aggatcgccg
     4621 tctggccgct gtcgccgagc tgctgccagc cggtgccgaa gtcgcgcagc gccgcggccg
     4681 tggtcgccga tgccgcggtg acgatcaggt cgtcgcgcac gccctcgtag aaatgccgca
     4741 gctcgcgggc ccgctcgtcg gccaccgcct ggagcttgcc ctgggtcagc ccgatcac
//
LOCUS       DATAZA010000297         3958 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_263236, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000297 DATAZA010000000
VERSION     DATAZA010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3958
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_263236"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1089)
                     /locus_tag="VHZ56_07480"
     CDS             complement(<1..1089)
                     /locus_tag="VHZ56_07480"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX4297848.1"
                     /translation="MAEDFSTLGLRLPPSASLLSVRSGRHWTAAGIAAETARRAMLLS
                     ASGLARGDRVVVAEADPAEVLLAIFACWRAGLCVVAVNPALAPAEQQTVIEATGARAW
                     LGELRVDLPAPASAGTTSPVPLGPDEPALILMTSGTTGRPKGIAHSGRSLAARITLNI
                     AAIGAGVLAETLCVLPVFFGHGLIGNALTPLFAGGRVHLWPTPTLAELPGLGPYLDAN
                     AISFMSSVPSFWKLATRVSPRPATPLARIHVGSAPLSFGQWQQIAAWGGTDKVFNMFG
                     MTETANWIGGAALAEADGRDGYIGPAWGGAFAVRTEAGAIAGSGRGEVLLRSPSMMLG
                     YWRRPDLDADAFVDGWFRTGDTGELAADG"
     gene            complement(1165..1524)
                     /locus_tag="VHZ56_07485"
     CDS             complement(1165..1524)
                     /locus_tag="VHZ56_07485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX4297849.1"
                     /translation="MTPLGQKMRELRAARGVTLKQMARALDVSSAYLSALEHGRRGRP
                     TWILLQRIMQYFNVIWDEAEELQRLAELSDPKVSIETGGLPAEATEFANRLARDIGRL
                     SPEDLSALQAELIKRVK"
     gene            complement(1521..2093)
                     /locus_tag="VHZ56_07490"
     CDS             complement(1521..2093)
                     /locus_tag="VHZ56_07490"
                     /inference="COORDINATES: protein motif:HMM:NF013844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEX4297850.1"
                     /translation="MASRGGSKAPPVPDFHLWADVTETVLPLRPRRRWRPAPALPLPP
                     ATPPAPKPPRIIAMPPYQSPQTPGKSPIGRIEPKLRQKLGRGRIGIDGTLDLHGMRQH
                     EAYGALARYLRARVARGDRTILVITGKGLKKLNGDPTAIVERGVLRTMLPIWLNSPEL
                     GPLVAGWDQSAQGHGGEGAWYVRLRRLERL"
     gene            complement(2108..2851)
                     /locus_tag="VHZ56_07495"
     CDS             complement(2108..2851)
                     /locus_tag="VHZ56_07495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013528722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tim44/TimA family putative adaptor protein"
                     /protein_id="HEX4297851.1"
                     /translation="MDQFFDIPTLIVIAVAIFVLFRLRQVLGTRTGNERPPFNRAAPT
                     PPNAAKPNAGNPPVDDKTVTPLRPAALPAPDADADRRALKLGAEIEQLSHGDAAVAAG
                     LKAVGEADPSFSPKAFLEGAKQAYEMVVTAFATGDRKTLKSLLDKDVYDGFEHAIGER
                     EAAGKKIDFTFVGLPKVEITTAELDKRDARVAVTFHAEIVSVTRDKSGAVVDGDTDKV
                     QTIADEWTFARPLRSRDPNWKLVATNQLS"
     gene            3002..3430
                     /locus_tag="VHZ56_07500"
     CDS             3002..3430
                     /locus_tag="VHZ56_07500"
                     /inference="COORDINATES: protein motif:HMM:NF016102.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HEX4297852.1"
                     /translation="MGRLVLAGWVLLTLVEITLFILIGEAIGVVPTLLGVVLGSIAGA
                     LLVRWQGLSLLRDLQMSLQRGELPARRVGDAVFIGAGGFLLMVPGYFTDLVGLLLLLP
                     PTRGLVYRLLGRWFRVATAAPAAAGGPELLDLKPSDWRER"
     gene            3498..>3958
                     /gene="secB"
                     /locus_tag="VHZ56_07505"
     CDS             3498..>3958
                     /gene="secB"
                     /locus_tag="VHZ56_07505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0051262 - protein tetramerization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HEX4297853.1"
                     /translation="MADDTAATASSFSLIGQYIRDMSFENPGAPASIMIGGPNPNFSV
                     GINVGVKKQADDVYAVEITLNAKAEREKNVLFNVELIYGGVFRMKNIPEAQLAPLLLV
                     ECPRLIFPFARQVLASITQQGGFPPLMMEPVDFAAIYQQNLKSLQDAQSAPT"
BASE COUNT          576 a         1314 c         1468 g          600 t
ORIGIN      
        1 gccatcggca gcgagctcgc cggtgtcgcc ggtgcggaac cagccatcga cgaaggcgtc
       61 ggcgtcgagg tcggggcggc gccagtagcc cagcatcatc gagggtgagc ggagcagcac
      121 ttcgccgcgg ccggagccgg cgatggcgcc ggcctcggtg cgcaccgcga aggcgccgcc
      181 ccaggccggc ccgatgtagc cgtcgcggcc gtcggcttcg gccagcgcgg cgccgccgat
      241 ccagttggcg gtttcggtca tgccgaacat gttgaagacc ttgtcggtgc cgccccaggc
      301 ggcgatctgc tgccactgcc cgaacgagag cggggccgag ccgacatgga tgcgggccag
      361 cggcgtcgcc gggcgcggcg agacgcgggt ggcgagcttc cagaacgagg gcaccgagct
      421 catgaacgag atggcgttgg catcgagata gggaccgagc ccgggcaatt ccgccagcgt
      481 gggggtcggc cacagatgca cccggccgcc ggcgaacagc ggcgtcagcg cattgccgat
      541 gaggccgtgg ccgaagaata ccggcagcac gcagagcgtt tcggccagca cgccggcgcc
      601 gatcgcggcg atgttgagcg tgatgcgggc ggcgaggctg cggccggaat gagcgatgcc
      661 cttgggacgg ccggtggtgc ccgaggtcat gaggatgagc gccggctcgt ccggcccgag
      721 cgggaccggc gatgtcgtcc cggccgaggc gggcgccggc aggtccactc gcaactcgcc
      781 gagccacgcc cgtgcgccgg tcgcctcgat cacggtctgc tgttcggccg gcgccagcgc
      841 cgggttgacc gcgacgacgc agaggccggc ccgccagcag gcaaagatcg ccagcaggac
      901 ctcggccgga tcggcttcgg cgacgacgac gcggtcgccg cgggcaaggc cggacgcgct
      961 cagcagcatg gcgcgccgcg ccgtctcggc cgcaatcccg gcagccgtcc agtggcggcc
     1021 gctgcgtacg ctcagcagcg atgcggacgg cggcaggcgc agtccaaggg tcgagaaatc
     1081 ttcggccaaa tgtccgggtc ccgggtgtcc ggagccgtct ttagcacagc cggccgaaat
     1141 ggaaatcgcg ggcgcgcggg cgacctattt gacccgcttg atcagctcgg cctgcagcgc
     1201 cgacaggtct tcgggcgaga gccggccgat gtcgcgggcc agccggttgg cgaattcggt
     1261 cgcctcggcc ggcagcccgc cggtctcgat cgagactttt ggatcggaga gctcggccag
     1321 ccgctgcagc tcctcggcct cgtcccagat gacgttgaaa tactgcatga tgcgctgcag
     1381 caggatccag gtgggcctgc cgcggcggcc gtgctcgagg gcgctgagat aggcgctcga
     1441 cacgtccagc gcccgcgcca tctgcttgag ggtgacgccg cgcgccgcgc gcagctcgcg
     1501 catcttctgg ccgagcgggg tcacagccgc tccagccggc ggagccggac gtaccaggcg
     1561 ccctccccgc catggccctg cgccgactgg tcccagccgg cgaccagcgg gccgagctcg
     1621 ggcgagttga gccagatcgg cagcatggtg cgcagcacgc cgcgctcgac gatggcggtg
     1681 ggatcgccgt tgagcttctt gaggcccttg ccggtgatca cgaggatggt ccggtcgccg
     1741 cgcgccaccc gggcccgcag gtagcgcgcg agggcgccat aggcttcgtg ctggcgcatg
     1801 ccgtgcaggt cgagggtgcc gtcgatgccg atacggccgc gcccgagctt ctgccgcagc
     1861 ttgggctcga tccggccgat cggcgatttt cctggcgtct gcggggattg gtatggcggc
     1921 atagcaatga tccgcggcgg ttttggcgcc ggcggcgtgg ccggcggcaa gggcagcgcc
     1981 ggggccgggc gccagcggcg gcgcggccgc agcggcagca cggtctcggt cacgtcggcc
     2041 cacagatgga aatcgggaac gggcggcgcc ttcgatccgc cccggctggc catcgccgcc
     2101 tccgccctca ggacagctgg ttggtcgcga ccagcttcca gttgggatcg cgcgagcgga
     2161 gcggccgggc gaaggtccac tcgtcggcga tggtctgcac cttgtcggta tcgccatcga
     2221 ccacggcgcc gctcttgtcg cgggtcaccg aaacgatctc ggcgtggaag gtgacggcga
     2281 cgcgggcgtc gcgcttgtcg agctcggcgg tggtgatctc gaccttgggc aggccgacga
     2341 aggtgaaatc gatcttcttg ccggccgcct cgcgctcgcc gatggcgtgc tcgaagccgt
     2401 catagacgtc cttgtcgagc agcgatttga gggtcttgcg gtcgccggtg gcaaaggcgg
     2461 tgacgaccat ctcgtaggcc tgcttggcgc cctcgaggaa ggccttgggc gaaaacgacg
     2521 gatcggcctc gccgaccgcc ttgaggccgg cggcgacagc ggcgtcgccg tggctcagct
     2581 gctcgatctc ggcgccgagc ttgagggcgc gccgatcggc atcggcgtcg ggcgccggca
     2641 gcgcagcggg acggagcggg gtgacggtct tgtcgtcgac gggcggattg ccggcattgg
     2701 gcttggcggc attgggcggg gtcggcgccg cgcggttgaa cggcggccgc tcattgccgg
     2761 tccgggtgcc gaggacctgg cggagccgga acagcacgaa aatcgccacc gcgatgacga
     2821 tcagggtggg aatgtcgaag aactggtcca tggacttaat accgcggacc gtgcgggaag
     2881 aatccgaggg gcgcatctgg tccggcggtg cgtccgctcc ctatataggc aatgcggtac
     2941 cctgaaacca gttcaccaat ggtggacagg acgggcaaat cggcacggag gctcgctgcc
     3001 aatgggacgt ctggtgctgg ccggctgggt cctcctgacg ctggtcgaga tcacgctctt
     3061 catcctcatc ggcgaggcga tcggggtggt gccgacgctc ctgggcgtgg tgctgggctc
     3121 gatcgccggg gcgctgctgg tgcgctggca gggcctgtca cttctgcgcg acctgcagat
     3181 gtcgctgcag cgcggcgaat tgccggcgcg gcgggtcggc gacgcggtgt tcatcggcgc
     3241 cggcgggttc ctgctgatgg tgccgggcta tttcaccgac ctcgtcgggc tgctgctgct
     3301 cctgccgccg acccgcgggc tggtctaccg gctgctcggc cgctggttcc gggtggcgac
     3361 ggcggcgccg gcggcggccg gcggcccgga gctgctcgac ctcaagccct ccgactggcg
     3421 cgagcgctga gcttgtgagg gtcgggcaaa cctgctagtg cccgcgccgc cccactggac
     3481 cacaaggacc cgcacccatg gccgacgaca ccgcggcgac tgcctcgagc ttcagcctca
     3541 tcggccagta tatccgcgac atgagcttcg agaatccggg cgcgccggcc tcgatcatga
     3601 tcggtggccc caatccgaat ttctcggtcg gcatcaatgt cggggtgaag aagcaggccg
     3661 acgacgtcta tgccgtcgag atcacgctca acgccaaggc cgagcgcgaa aagaacgtgc
     3721 tgttcaacgt cgagctgatt tatggcggcg tgttccggat gaagaacatc cccgaggcgc
     3781 agctggcgcc gctgctgctg gtcgaatgcc cgcggctgat cttcccgttc gcccgccagg
     3841 tgctggcctc gatcacccag cagggcggct tcccgccgct gatgatggag ccggtcgact
     3901 tcgccgcgat ctaccagcag aacctcaaat cgctgcagga cgcccagtcc gccccgac
//
LOCUS       DATAZA010000298         2006 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1424698, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000298 DATAZA010000000
VERSION     DATAZA010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1424698"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..221
                     /locus_tag="VHZ56_07510"
     CDS             <1..221
                     /locus_tag="VHZ56_07510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="urease accessory protein UreD"
                     /protein_id="HEX4297854.1"
                     /translation="LAFATVLHISPTAEARLEAVRALLPPTGGASLIGDRLTVRLLAA
                     NGLALRRAVSPIIALLSSAGSLPRLWSL"
     gene            228..530
                     /locus_tag="VHZ56_07515"
     CDS             228..530
                     /locus_tag="VHZ56_07515"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008121015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009039 - urease activity [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0043419 - urea catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit gamma"
                     /protein_id="HEX4297855.1"
                     /translation="MNLTPREKDKLLISMAAIVARKRLDRGVRLNHPEAIALITDFVV
                     EGARDGRSVADLMEAGAHVVTRQQVMEGIPEMIPDVQVEATFPDGTKLVTVHHPIR"
     gene            535..843
                     /locus_tag="VHZ56_07520"
     CDS             535..843
                     /locus_tag="VHZ56_07520"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015314507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0035550 - urease complex [Evidence IEA];
                     GO_process: GO:0043419 - urea catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit beta"
                     /protein_id="HEX4297856.1"
                     /translation="MIPGEIIPRPGNIELNAGARTVTLTVANTGDRPIQVGSHYHFHE
                     TNNGLRFDREKARGMRLDIAAGTAVRFEPGQSREVTLVPLAGSRTVFGFQQKIMGKLE
                     "
     gene            840..1259
                     /locus_tag="VHZ56_07525"
     CDS             840..1259
                     /locus_tag="VHZ56_07525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297857.1"
                     /translation="MNERDTVFRERLVALMTDLNGPEGKERPLRRMVGAYAKRLYSEA
                     GARDWTDLKGRADAKTYDSMLNLFQRESEKALRDDDKVSARAFEVLALSVIARRQQQD
                     DLVRGIELLDKYITQCITLAERTRTGFVHVPAARGET"
     gene            1263..>2006
                     /locus_tag="VHZ56_07530"
     CDS             1263..>2006
                     /locus_tag="VHZ56_07530"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020808771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit alpha"
                     /protein_id="HEX4297858.1"
                     /translation="MPARISRATYADMYGPTTGDKVRLADTDLVIEVERDFTVYGEEV
                     KFGGGKVIRDGMGQSQATRAEGAVDTVITNALIVDHTGIYKADVGLKDGRIAGIGKAG
                     NPDTQPGVTIIIGPSTEAIAGEGRILTAGGFDAHIHFIAPQQIEEALMSGVTTMLGGG
                     TGPAHGTLATTCTGAWHAERMIEAFDAFPMNLALAGKGNASKPAPLEEMLLSGVAALK
                     LHEDWGTTPAAIDNCLSVADRFDVQVMIHT"
BASE COUNT          351 a          752 c          622 g          281 t
ORIGIN      
        1 ccctcgcctt tgccaccgtc ctccacattt cgccgaccgc cgaagcccgg ctcgaggcgg
       61 tgcgggcatt gctgccgcca accggcggcg cgagcctgat cggcgaccgg ctgacggtgc
      121 ggctcctcgc cgcaaacggc ctcgccttgc gccgcgcagt ttcacccatt atcgctttgc
      181 tgtcgtccgc gggcagcctc ccgcgccttt ggagcctctg acgccagatg aacctgacgc
      241 cccgcgaaaa ggacaaactg ctgatctcga tggccgccat cgtcgcccgt aagcggctcg
      301 accgcggcgt ccggctcaac catcccgaag ccatcgcgct gatcaccgac ttcgtcgtcg
      361 agggcgcccg cgacggccgc tccgtcgccg acctgatgga ggccggcgcc catgtcgtca
      421 cccgccagca ggtgatggag ggcatccccg agatgatccc cgacgtgcag gtcgaggcca
      481 ccttccccga cggcaccaag ctggtgaccg tccatcatcc gatccggtag ctccatgatc
      541 cccggcgaaa tcatccccag accaggcaat atcgagctca atgccggcgc ccggacggtc
      601 accctcaccg tcgccaacac cggcgatcgt ccgatccagg tcggctcgca ctatcatttc
      661 cacgagacca acaacggcct gcgcttcgac cgcgagaaag cccgcggcat gcgcctcgac
      721 attgccgccg gcaccgccgt gcgcttcgag cccggccagt cgcgcgaggt gacgctcgtg
      781 ccgctcgccg gcagccgcac cgtgttcggc ttccagcaga agatcatggg aaagctcgaa
      841 tgaacgaacg tgacaccgtg ttccgcgagc ggctggtcgc gctgatgacc gacctcaacg
      901 gccccgaggg caaggagcgg ccgctgcgcc gcatggtcgg tgcctacgcc aagcgcctct
      961 acagcgaggc cggcgcccgc gactggaccg acctcaaggg gcgcgccgac gccaagacct
     1021 acgactccat gctgaacctg ttccagcgcg agagcgagaa ggccctgcgc gacgacgaca
     1081 aggtttcggc ccgcgccttc gaggtgctgg cgctgtcggt gatcgcgcgg cggcagcagc
     1141 aggacgacct ggtgcgcggc atcgagctgc tcgacaaata catcacccaa tgcatcacgc
     1201 tggccgagcg cacgcgaacc gggttcgtgc acgttccggc cgcccgcggg gagacctgac
     1261 cgatgccggc ccgcatttcc cgcgccacct atgccgacat gtacggaccg accaccggcg
     1321 acaaggtccg gctcgccgac accgacctcg tcatcgaggt ggaacgcgac ttcaccgtct
     1381 atggcgagga ggtcaagttc ggcggcggca aggtgatccg cgacggcatg ggccagtccc
     1441 aggcgacgcg cgccgagggc gccgtcgaca ccgtcatcac caatgccctg atcgtcgacc
     1501 acaccggcat ctacaaggcc gatgtcgggc tcaaggacgg ccgcatcgcc ggcatcggca
     1561 aggccggcaa tcccgacacc cagcccggcg tcaccattat catcggcccc tccaccgagg
     1621 cgattgccgg cgaaggcagg atcctcaccg ccggcggctt cgacgcccac atccacttca
     1681 ttgcgccgca gcagatcgag gaagcgctga tgagcggcgt caccaccatg ctgggcggcg
     1741 gcaccggccc ggcgcacggc acgctggcca cgacctgcac cggcgcctgg cacgccgagc
     1801 ggatgatcga ggcgttcgac gccttcccga tgaacctcgc gctcgccggc aaaggcaacg
     1861 cgtcgaagcc cgcgccgctc gaggaaatgc tgctgtccgg cgtcgcggcg ctgaagctgc
     1921 acgaggactg gggcacgacc ccggccgcca tcgacaactg cctgtcggtc gccgaccgct
     1981 tcgacgtgca ggtgatgatc cacacc
//
LOCUS       DATAZA010000299         2237 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2119954, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000299 DATAZA010000000
VERSION     DATAZA010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2119954"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            495..1232
                     /locus_tag="VHZ56_07535"
     CDS             495..1232
                     /locus_tag="VHZ56_07535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4297859.1"
                     /translation="MTVAIVTGASRGLGAAMAKALAADGHRVAVNYAHDQDGAERVVA
                     AIAGAGGEARAYRFDVTDGAAVATGFAAIGRDLGVPDIVVSNAIGQHGSQPVEQQTWD
                     SHLAQLVFCVKAPLLLLQSVVGEWKTRRAGCMINIGSEVVSIGNPELAPYVGAKAAMV
                     GLTRSWARELGPFDIRVNLVEPGYIPVERHSSTPQSSFDQYAEDVALRRMGRPEDVAG
                     MVAYLASPRANFITGQTFAVNGGRTLA"
     gene            1506..>2237
                     /locus_tag="VHZ56_07540"
     CDS             1506..>2237
                     /locus_tag="VHZ56_07540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004689166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX4297860.1"
                     /translation="MTFPIDHIRNFSIVAHIDHGKSTLADRLIQMTGGLEAREMKEQV
                     LDSMDIERERGITIKAQTVRLNYTAKNGEAYVLNLIDTPGHVDFAYEVNRSLAAVEGS
                     LLVVDATQGVEAQTLANVYHAMEVDHDIVPVINKVDLPAADVARVKQQIEDVIGLDAS
                     DALEISAKTGLGVDTVLEAIVHRLPAPKGDVNAPLKALLVDSWYDTYLGVVVLVRVID
                     GTIRKGQKIRMMNANAAYELDRVGVF"
BASE COUNT          389 a          801 c          692 g          355 t
ORIGIN      
        1 aacggacgaa caaactgccc gacctacgcg tcgtttgatc tgaacttaca tgcttgacag
       61 taagccggga gctgaggagt agccgttgcg gccgctccgc tacaacctgg ctaaggcgct
      121 tgagtgtcgc accacaagcg atcgtgacgt gacgctggcg atgatgcgcg ggagccgcgc
      181 ggctagtccg gattccgccg ctgccggttc ggccctcggt ccggttaatc ccccgaaaac
      241 cacgtttgcc cgcagccctg ccgcctgcta tcggccgcgc gatccccttc tctgtcccgt
      301 cgccgcgccg cgcccactcc atcgccttca gtcatgcccg gcgcgctgaa caccacgctc
      361 agtcgagccg cgtcgacatc ccgctcgaca cgcgccgcaa ttggcatatc gcgttgaacc
      421 tgcgtaagtg cgcgtcgagg cccggttccg gatgaccgcg cggcttcgcc atgcacacac
      481 tgaaccaggg taaaatgact gttgcaatcg tcaccggtgc gtcccgcggc cttggggcgg
      541 ccatggcaaa ggctctggcc gcggatggcc atcgggtcgc cgtgaactat gcccacgacc
      601 aggatggcgc cgagcgcgtc gtcgcggcca tcgccggggc cggcggagag gcccgcgcct
      661 accgcttcga cgtgaccgac ggggcggccg tggcgacggg atttgcggcc atcggccgtg
      721 acctgggcgt ccccgacatc gtcgtcagca atgccatcgg ccagcatgga tcgcagccgg
      781 tcgaacagca gacctgggac agccacctcg cgcagctggt cttctgcgtg aaggcgccgc
      841 tgctgctgct gcagtcggtg gttggtgaat ggaagacgcg ccgcgccggc tgcatgatca
      901 acatcggcag cgaggtggtc agcatcggca atccggaact tgcgccctat gtcggcgcca
      961 aggcggcgat ggtgggtctg acgcgctcgt gggcgcgcga gctcggcccg ttcgacatcc
     1021 gcgtcaacct ggtcgagccg ggctacatcc cagtggaacg gcattccagc acgccgcagt
     1081 cgagcttcga ccaatacgca gaggacgtcg cgctgcgccg gatgggcagg cccgaggacg
     1141 tagctggcat ggtggcctac cttgcctcgc cgcgcgccaa cttcatcacc gggcagacat
     1201 ttgcggtaaa cggcggccgc accttggcct agggcgatgc gccgggacca ggtcggcgat
     1261 ccttgatcca ccgccatctc gccacgtggt gaacgccgcc ggccagaacg gccgttcccg
     1321 gccacatgtg atggccgcgt gccggccatc gggccgacgt tgagccgtta actccaccca
     1381 gcgggcgcgt agcgcacgaa attaacaaac tctaaaccac gtttgccccg cccgcctgcg
     1441 cctgctatca gccgcgctac ccgtcccggc gccgccggcg gcgcgatgcg cagttcgaaa
     1501 gcccgatgac ctttcccatc gaccacatcc gcaatttctc gatcgtcgcc catatcgacc
     1561 acggcaagtc caccctcgcc gaccggctga tccagatgac cggcgggctc gaggcgcgcg
     1621 agatgaagga gcaggtgctc gactcgatgg acatcgagcg cgagcgcggc atcaccatca
     1681 aggcgcagac cgtgcgcctc aactacaccg cgaaaaacgg cgaggcctac gtcctcaacc
     1741 tcatcgacac ccccggccac gtcgatttcg cctacgaggt caaccgctcg ctcgccgccg
     1801 tcgagggctc cctgctcgtc gtcgatgcca cgcagggcgt cgaggcgcag accctcgcca
     1861 acgtctacca cgccatggaa gtcgaccacg acatcgtccc cgtcatcaac aaggtcgacc
     1921 tgcccgccgc cgacgtggcg cgcgtcaagc agcagatcga ggacgtcatc ggcctcgatg
     1981 cctccgatgc gctggagatt tccgccaaga ccggcctcgg cgtcgacacc gtgctcgaag
     2041 ccatcgtcca ccgcctgccg gcgccgaagg gcgacgtcaa tgcgccgctg aaggcgctgc
     2101 tggtcgacag ctggtacgac acctatctcg gcgtcgtcgt cctcgtccgc gtcatcgacg
     2161 gcaccatccg caagggccag aagatccgga tgatgaacgc caacgccgcc tacgagctcg
     2221 accgcgtcgg cgtcttc
//
LOCUS       DATAZA010000300         4208 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3166574, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000300 DATAZA010000000
VERSION     DATAZA010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4208
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3166574"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            68..499
                     /locus_tag="VHZ56_07545"
     CDS             68..499
                     /locus_tag="VHZ56_07545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ohr family peroxiredoxin"
                     /protein_id="HEX4297861.1"
                     /translation="MTKIVYTAHGTATHGGRAGGEARTDDGKVAVKLSVPKVMGGDDG
                     PGTNPEQLFSLGYSACFLGAMAGAARKQGKKLPEGAAVSADVSFADREDGVGYTIVPV
                     LTATVPGWSQAEIEANMKLAHDICPYSNLIRFAHEVELKVG"
     gene            complement(646..1656)
                     /locus_tag="VHZ56_07550"
     CDS             complement(646..1656)
                     /locus_tag="VHZ56_07550"
                     /EC_number="5.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016857 - racemase and epimerase activity,
                     acting on carbohydrates and derivatives [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldose epimerase family protein"
                     /protein_id="HEX4297862.1"
                     /translation="MVAVKAFGTFEGRRVDQFTLVSSSGVEVDLLNWGVVVRDWRVPV
                     GGKPRPVVLGLESFDDYPTHSPHLGALAGRIANRVRGASFSLGGKTYSLPRNDGPNSL
                     HGGPQGLGNVVWEAEPDDATNAVVFTLRSPDGASGYPGNVTFKATYRLTGNRLRLDLG
                     AATDRPTPVSLVQHQYFNLGTTDTVLDHRYWLKASAYTESGTDLVPTGNILEVKDGDD
                     RDFRTPRTMRNAAGEPLDYDGNYVLDAGRDPADPIAVVEAPAGDLTLKLWSDRPGLQF
                     YNAVTTNVAARGIGGRHYGRHSGFCLEDQMFPDALHHPHFPSIVITPDTPYAHWCEFE
                     IA"
     gene            1771..2811
                     /locus_tag="VHZ56_07555"
     CDS             1771..2811
                     /locus_tag="VHZ56_07555"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX4297863.1"
                     /translation="MDQVPDGRRATVHDVARTAGVSLATVDRVLNARPGVRPETAQKV
                     ETAIQALDFRRDLSASLLARARDLRIVFLIPDGGNAFMASLTAAIGRRLRASRNERLA
                     LAAAQYHALDPSALVARLDGLDGRQTDCAVIVAPDDPAVARAIDAATRRGVAVITLVS
                     DLPGSARRHFIGIDNQAAGRTAAALLGRFCPAGKIGVIVGSPALRDHRERFEGFAGVL
                     GREFPGLEIVGPREGFDDDAQTEAAVLDLVAAHHDLAGIYTLGAGNAGLVAALGKAHR
                     AGNIRVVAHELTETTRAALRAGTLDVVLDQNPDGEIRAAVAAARQVALSPDAEIHSDP
                     IEIGIFLRDNLP"
     gene            2889..>4208
                     /gene="xylB"
                     /locus_tag="VHZ56_07560"
     CDS             2889..>4208
                     /gene="xylB"
                     /locus_tag="VHZ56_07560"
                     /EC_number="2.7.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004856 - xylulokinase activity [Evidence
                     IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0005997 - xylulose metabolic process
                     [Evidence IEA];
                     GO_process: GO:0042732 - D-xylose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xylulokinase"
                     /protein_id="HEX4297864.1"
                     /translation="MSYLGIDIGTSGVKAILIDRAGKALGEATARSVEPVRPHPGWSE
                     QNPADWWDAVLKACDALSKSHPAEMAAVRGIGLSGHMHGATLLGSKDEVLRPCILWND
                     GRSAAECAEMEAALPTLRQLAGNIAMPGFTAPKIAWVRKHEPEIYAKIAKVLLPKAYI
                     RLLLTGEHVEEMSDASGTLWLDVQKRDWSDQLLAVTGLTREHMPRLVEGSAPAANLKP
                     EFARRWGMSGTVIVAGGAGDNAAAACGIGAIRPGEGFVSLGTSGVLFVSNEKFRPNTA
                     GAVHAFCHAIPQTWHQMGVILSATDSLNWLSGVTGRQQAELSAAAEASFAGPGEEIFL
                     PYLSGERTPHNNAGARGSFVGLSHRSDQARLTQAVMEGVSFAFRDCQRVLNDAGTKFS
                     RLLAVGGGSKSALWLKLIATNLDIEIALPEDGDFGGALGAARLGLCAA"
BASE COUNT          639 a         1513 c         1417 g          639 t
ORIGIN      
        1 tattgtgcac aaccgaatat cggcctatgc cgtcgccgtt ccgttttttt gcacaaggca
       61 gcccaagatg accaagatcg tttataccgc ccacggcacc gcgacgcatg gcgggcgcgc
      121 cggcggcgag gctcgcaccg atgacggcaa ggtggccgtc aagctctccg tccccaaggt
      181 gatgggcggt gacgacggcc cgggcaccaa tcccgagcag ctgttctcgc tcggctactc
      241 cgcgtgcttc ctcggcgcca tggcgggcgc ggcccgcaag cagggcaaga agctgcccga
      301 gggcgccgcg gtcagcgccg acgtcagctt cgccgaccgc gaggacggcg tcggctacac
      361 catcgtgccg gtgctgaccg cgacagtgcc gggctggagc caggccgaaa tcgaggcgaa
      421 catgaagctc gcccacgaca tctgccccta ttcaaatctc atccgcttcg cccacgaggt
      481 cgagctgaag gtgggctgaa gccagccgca gcgtcgttcc cgcccagtac ggtgcgggga
      541 cgacagcgtg ggtgattcat ccgagccgcc tataggcgcg cagtgcgcag tatcgactgg
      601 agtgttgttg cagttattgc cgacgaccgt ccgccggctc gcgtcctagg cgatctcgaa
      661 ttcgcaccag tgcgcgtagg gcgtgtcggg cgtgatgacg atcgagggga aatgcgggtg
      721 gtgcagcgcg tcggggaaca tctggtcctc gaggcagaag ccggaatgcc gcccgtagtg
      781 ccggccgccg atgccgcgcg ccgcaacgtt ggtggtgacg gcgttgtaga actgcagccc
      841 cggccggtcg ctccacagct tcagcgtcag gtcgccggcc ggcgcctcga ccacggcgat
      901 cgggtcggcc ggatcgcgcc cggcgtcgag cacgtaattg ccgtcatagt cgagcggctc
      961 gcccgcggcg ttgcgcatgg ttcgcggcgt gcggaagtcg cggtcgtcgc cgtccttgac
     1021 ctcgaggatg ttgcccgtcg gcacgaggtc cgtgccgctc tcggtatagg ccgaggcctt
     1081 gagccagtag cggtggtcga gcacggtgtc agtggtgccg aggttgaaat actggtgctg
     1141 cacgaggctt accggcgtcg gccggtcggt cgccgccccc agatcgagcc gcagccggtt
     1201 gccggtcagc cgatacgtcg ccttgaaggt gacgttgccc ggataccccg acgccccgtc
     1261 cggggatctg agggtgaaca ccacggcgtt ggtggcgtcg tcgggctctg cctcccacac
     1321 cacattgccc agcccctgcg ggccgccatg cagcgagttg ggcccgtcgt tccggggcag
     1381 tgaataggtc ttgccgccga gcgaaaagct ggccccgcgc accctgttgg cgatgcggcc
     1441 ggcaagcgcc cccagatgcg gcgaatgcgt cggatagtcg tcgaagctct cgagccccag
     1501 caccaccggg cgcggcttgc cgccgaccgg cacccgccag tcgcggacca cgacgcccca
     1561 gttgaggagg tcgacctcga cgccgctgct cgagaccagg gtgaactggt ccacccgcct
     1621 gccctcgaac gtgccgaatg ccttgaccgc gaccatgttc ccctccgccg atttcgggcg
     1681 cgggtgtagc ccgcttttgc cgaccgcacc aagccgaaat cggttgacgg gcgttttgcg
     1741 ggcgcggcaa cgtcggggca ggaggatgcg atggatcagg tccccgatgg acgccgcgcc
     1801 accgtgcacg acgtcgcccg tacggccggc gtctcgctgg cgacggtcga ccgcgtgctc
     1861 aatgcccggc cgggcgtccg gcccgagacc gcccagaagg tcgagaccgc catccaggcg
     1921 ctggatttcc gccgcgacct gtcggcatcg ctgctggccc gggcccgcga cctgcgcatt
     1981 gttttcctca tccccgatgg cggcaacgcc ttcatggcga gcctcaccgc cgccatcggc
     2041 cgccgcctgc gcgccagtcg caacgagcgg ctggccctcg ccgccgccca gtatcacgcg
     2101 ctcgatccct cggccctcgt cgcccggctg gacgggctcg acgggcgcca gaccgattgc
     2161 gccgtgatcg tcgcccccga cgatcccgcc gtcgcccgcg ccatcgacgc cgcgacccgc
     2221 cgcggcgtcg ccgtcatcac gctggtttcc gacctgcccg gctcggcccg ccggcatttc
     2281 atcggcatcg acaaccaggc ggcgggccgc accgccgcgg cgctcctcgg ccgcttctgc
     2341 ccggccggaa aaatcggcgt catcgtcggc tccccggccc tgcgcgacca ccgcgagcgc
     2401 ttcgagggct tcgccggcgt gctcggccgc gaattcccgg ggctcgagat cgtcggtccg
     2461 cgcgagggct tcgacgacga cgcccagacc gaagccgccg tgctcgacct cgtcgcggcg
     2521 caccacgacc tcgccggcat ctatacgctg ggggccggca atgccgggct ggtggcggcg
     2581 ctgggcaagg cgcaccgggc gggcaacatc cgcgtcgtcg cgcacgaatt gaccgaaacc
     2641 acccgtgccg cgctgcgcgc cggcacgctc gacgtggtgc tcgaccagaa cccggacggc
     2701 gaaatccgcg ccgccgttgc cgccgcccgg caggtggcgc tgtcgccgga tgccgagatt
     2761 cattcggacc ccattgaaat cggcattttc ctgagagaca atctgccgta acgggacagc
     2821 cgggcaaaaa gcctgcgtcg ggaggtcaac atcatcgctg cagcaccacg ctgtgaggta
     2881 cgtgcctcat gagctatctc ggcatcgaca tcggcacctc cggggtcaag gcgatcctca
     2941 tcgaccgcgc cggcaaggcg ctcggcgagg cgaccgcccg gtcggtcgag ccggtgcgcc
     3001 cgcaccccgg ctggtccgag cagaatccgg ccgactggtg ggacgccgtg ctcaaggcct
     3061 gcgacgcgct cagcaagtcg catccggccg aaatggcggc ggtgcgcggc atcgggctga
     3121 gcggccacat gcacggcgcg acgctgctgg gcagcaagga cgaggtgctg cgcccctgca
     3181 tcctgtggaa cgacggccgt tccgccgccg aatgtgccga gatggaagcg gcgctgccga
     3241 ccctgcgcca gctcgccggc aacatcgcca tgcccggctt caccgccccc aagatcgcct
     3301 gggtgcgcaa gcatgagcct gaaatctatg cgaaaatcgc caaggtcctg ctgcccaagg
     3361 cttacatccg gctgctgctg accggcgagc atgtcgagga gatgagcgac gcctccggca
     3421 cgctctggct cgacgtgcag aagcgcgact ggtccgacca gctgctcgcc gtcaccggtc
     3481 tcacccgtga acatatgcca cggctggtcg agggttcggc gccggccgcc aatctcaagc
     3541 ccgaattcgc ccgccgctgg gggatgagcg gcactgtcat cgtggccggc ggggccggcg
     3601 acaatgccgc cgccgcctgc ggcatcggcg ccatccggcc gggggagggg ttcgtctcgc
     3661 tcggcacctc cggcgtgctg ttcgtctcca acgagaaatt ccggcccaac accgccggcg
     3721 ccgtgcacgc cttctgccac gccatcccgc agacctggca ccagatgggg gtgatcctca
     3781 gcgccaccga cagcctcaac tggctctccg gcgtcaccgg gcggcagcag gccgaactca
     3841 gtgccgcggc cgaggcaagc tttgccggac cgggcgaaga gatcttcctg ccctacctgt
     3901 cgggcgagcg tactccgcac aacaatgccg gcgcgcgcgg cagcttcgtc ggcctcagcc
     3961 accgcagcga ccaggcgcgg ctcacccagg cggtgatgga gggcgtgagc tttgccttcc
     4021 gcgactgcca gcgcgtgctc aacgacgccg gaacgaaatt ctcgcgactg ctcgcggtcg
     4081 gcggcggctc gaaatcggcg ctctggctga agctgatcgc caccaatctc gacatcgaga
     4141 tcgcgctgcc cgaggacggc gatttcggtg gcgcgctcgg cgccgcgcgg ctcggcctgt
     4201 gcgccgcc
//
LOCUS       DATAZA010000301         1938 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1308940, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000301 DATAZA010000000
VERSION     DATAZA010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1938
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1308940"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            198..449
                     /gene="grxC"
                     /locus_tag="VHZ56_07565"
     CDS             198..449
                     /gene="grxC"
                     /locus_tag="VHZ56_07565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HEX4297865.1"
                     /translation="MSKVQIYTTNWCPYCTAAKALLSDKGVPYEEIDVTDQAGREAMI
                     ERAHGRRTVPQIFIGDTHVGGYDDMAALERRGKLDPLLA"
     gene            453..1292
                     /locus_tag="VHZ56_07570"
     CDS             453..1292
                     /locus_tag="VHZ56_07570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEX4297866.1"
                     /translation="MVRVAALQMNSGTQPGPNLEALAVLAHEAAAQGARYALSPEVSV
                     VFAENREGLAAVAGPWEGNPAIARCAQIARDTGLWLHLGSLAVALPDGRFANRSVLFK
                     PDGGIAATYDKIHLFDATLPGLKAYRESDTYAGGGQAVIADAAGLRLGLTICYDVRFP
                     ALHRALAAAGAEVLTVPAAFTVPTGEAHWQVLLRARAIETGCFVIAAAQAGHHQNGRS
                     TWGHSMIVDPWGKILGEMDGESTGVLVADIDLAAVAEARGRVPALANEQPFSLSVNDR
                     RAS"
     gene            1313..1738
                     /locus_tag="VHZ56_07575"
     CDS             1313..1738
                     /locus_tag="VHZ56_07575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006014199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1178 family protein"
                     /protein_id="HEX4297867.1"
                     /translation="MIHYSLVCDKSHKFDGWFANAAAYDAQKTRGLVSCPICLTTSVD
                     KAMMAPAIGRSGSEKMSLSIGHPQHAQLREAMLALRNKVTSEAAYVGDKFADEARKIH
                     YKEVDPRGIYGEATRDEVAALVEDGVDFMPLPSLPEEHN"
     gene            1817..>1938
                     /locus_tag="VHZ56_07580"
     CDS             1817..>1938
                     /locus_tag="VHZ56_07580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003545036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HEX4297868.1"
                     /translation="MPTPNAALSGTFTIGGDMPVHRLGFGAMRVTGTGIWGPPA"
BASE COUNT          331 a          644 c          662 g          301 t
ORIGIN      
        1 atccggcggg cccgcaaggc cgaggcactg gggctgagct ttcgcgaata ccagctggaa
       61 atcctcgaac gcgggcggtt cctgcaggcc gaggacgcgg cgcggatcgc tgaaatcatt
      121 gcgcggcggc ggggccgatg acgttgtcag cgggcgtcgg cgtcccatat aaagggcagc
      181 gaaacaccgg ttccaccatg tccaaggtcc agatctacac caccaattgg tgcccttact
      241 gcaccgccgc caaggcgctg ctcagcgaca agggcgtccc ctacgaggaa atcgacgtga
      301 ccgaccaggc cgggcgcgag gcgatgatcg agcgggccca tggccgccgc accgtgccgc
      361 agattttcat cggcgacacc catgtgggcg gctacgacga catggcggcg ctggagcggc
      421 ggggcaagct cgacccgctg ctggcctgaa ccatggtccg cgtcgccgcc ctgcagatga
      481 attcgggcac ccagcccggc cccaatctgg aggcgctggc ggtcctggcg cacgaggccg
      541 cggcgcaggg cgcgcgctac gccctcagcc cggaagtcag cgtcgtcttt gccgaaaatc
      601 gcgaggggct ggccgcggtt gcaggcccgt gggagggcaa tccggcgatt gcccgctgtg
      661 cgcagatcgc gcgcgacacc gggctctggc tgcacctcgg gtcgctggcc gtggcgctgc
      721 cggacggccg cttcgccaac cggtcggtgc tgttcaagcc ggatggcggg atcgccgcga
      781 cctacgacaa gatccatctc ttcgacgcga cattgccggg tctcaaggcc taccgcgaaa
      841 gcgacaccta cgccggcggg gggcaggcgg tgatcgccga tgcggccggc ctgcggctcg
      901 ggctcaccat ctgctacgat gtgcgctttc cggcgctgca tcgggctttg gccgcggctg
      961 gcgcggaggt gctgacggtg ccggcggcat tcaccgtgcc gacgggcgag gcgcactggc
     1021 aggtgctgct gcgggcccgg gcgatcgaga ccggctgctt cgtcatcgcc gcggcgcagg
     1081 ccgggcacca ccagaacggc cggtcgacct ggggccattc gatgatcgtc gatccctggg
     1141 gcaagattct cggcgagatg gacggggaga gcaccggagt cctggttgcc gatatcgatc
     1201 tcgcggcagt tgccgaagcc cgcggccggg tgccggcgct ggcaaacgaa cagccgtttt
     1261 cgctctccgt taacgataga cgcgcaagct aaatcccgat gaggttccga gcgtgatcca
     1321 ctactccctg gtttgcgaca aatcgcacaa gttcgacggc tggttcgcca acgcggccgc
     1381 ttacgacgcg cagaagaccc gcgggctggt gagctgtccg atctgcctca ccaccagcgt
     1441 ggacaaggcg atgatggccc cggcgatcgg ccgctcgggc agcgaaaaga tgtcgctctc
     1501 gatcggccat ccgcagcacg cgcaactgcg cgaggcgatg ctggcgctgc gcaacaaggt
     1561 gaccagtgag gcggcctatg tcggcgacaa gttcgcggac gaggcgcgca agatccacta
     1621 caaggaagtc gatccacgcg gcatctatgg cgaggcgacg cgcgacgagg tggccgcgct
     1681 ggtcgaggac ggcgtcgatt tcatgccgct tcccagcctg cccgaagagc ataactagcc
     1741 aaccggcgca cttccgcttg aaccgcttcg gcgtttcatc gttaactgac gatagaaacg
     1801 attcccggag ctttcgatgc caacccccaa cgcagccctc tcgggcactt tcaccattgg
     1861 cggcgacatg cccgtccatc ggctcggttt cggcgccatg cgcgtcaccg ggaccggcat
     1921 ctggggaccg ccggccga
//
LOCUS       DATAZA010000302         3447 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_844081, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000302 DATAZA010000000
VERSION     DATAZA010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3447
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_844081"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(291..1148)
                     /gene="ppk2"
                     /locus_tag="VHZ56_07585"
     CDS             complement(291..1148)
                     /gene="ppk2"
                     /locus_tag="VHZ56_07585"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006793 - phosphorus metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HEX4297869.1"
                     /translation="MADGDKSFDIDDPELPKWVRKGALKAGGYPYDSRLKNAEYLRQI
                     GQLQLELVKLQAFQLKSAGRMIIVFEGRDAAGKGGAIDRFREHLNGRYWLDVALPKPS
                     DRERTQWYFQRYADWLPAAGETALFDRSWYNRAGVEPVMGFCTPEQTDAFLDEAPRFE
                     RMLVRDGIHLFKFWLAIGRETQLKRFHDRRHDPLKQWKISPMDVAAIGKWDAYTDAAH
                     RMLQATSTPETPWQVVLANDKRRARIEILRSVLHAIDYDGKDAAAVGEIDDRIVIDPE
                     RYIHQHSDS"
     gene            1240..2277
                     /locus_tag="VHZ56_07590"
     CDS             1240..2277
                     /locus_tag="VHZ56_07590"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4297870.1"
                     /translation="MADTLSSDQQLALLGGLADALPDPCLLLDRRSVVLHRNPAAARD
                     MPEIAEGSLLTLALRNPALLSAIDTARRTNLAQSVELHQTVPNETWHRAYVAPLPAGD
                     GMLALTLHSLTDQKRLEQLRSDFIANASHELRTPLTSLVGFIDTLLGPAARDEAARER
                     FLGIMRQQAARMSALIDDLLSLSRIELRQHLKPTGSVDLVRLVEEVRDGLETQAAEAA
                     VKIGLGGLDSAVVTGDPAELYEVFENLIDNAIKYGADGGSIDVAITAGRAGYDYAVTV
                     TDHGAGIAQEHVPRLTERFYRVDAESSRKKKGTGLGLAIVKHIINRHRGLLTIRSKPG
                     EGTRVELLLNR"
     gene            2444..>3447
                     /gene="pstS"
                     /locus_tag="VHZ56_07595"
     CDS             2444..>3447
                     /gene="pstS"
                     /locus_tag="VHZ56_07595"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016921717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA];
                     GO_process: GO:0035435 - phosphate ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HEX4297871.1"
                     /translation="MKHAILSGIAALAVAAALTGTALAADISGAGSTFIYPVFAKWAD
                     AYKTATGTGLNYQSIGSGGGIKQIEAKTVTFGATDKPLSDDELAKNGLIQFPMIMGGI
                     VPIVNIDGVKPGDLVLDGKTLAGIFMGTITSWDDPSIKALNASLSLPSAPIVVVHRSD
                     GSGTTFNFTDFLGKYSDDWQTNVGSDTAVEWPVGIGAKGSEGVANTVKQTIGSIGYDE
                     YAYAAQNNLSYAKMVNAAGKVVAPSLDTFNAAASNADFADAKNFNLVITNQPGDKSWP
                     IAASTWVLIHTQPDDAAAAGEALKFFDWAYKGGKEQSKALDYVSIPDPLVALIEKSWS
                     A"
BASE COUNT          599 a         1206 c         1064 g          578 t
ORIGIN      
        1 ggcggaatgc ggttggaggc atgatcgcag acgattgcga aagggctcga accctttgca
       61 tttacggtcc gcaccggcgc cagaaggtcc gcgtcccgcg gtgcccctgc gtagcccatg
      121 tcgcccccga tcgcaggcgg cctgtagtcc gcctgcggca gccccgcgac ccctcgtgcg
      181 cgacgcccgc cgatcagcgc aattgattcg cttttaccga cactgtcaaa ccgcggagtc
      241 ccgcagccag tgggcggctg tggaaaatct tgaccggttg gtcaagccgc tcagctgtcg
      301 ctgtgctggt ggatgtagcg ctcgggatcg atgacgatcc ggtcgtcgat ttcgccgacc
      361 gctgctgcat ccttgccgtc gtagtcgatg gcgtgcagca ccgagcgcag gatttcgatc
      421 cgggcccgcc gcttgtcgtt ggcgaggacc acctgccacg gtgtctccgg cgtgctcgtc
      481 gcttgcagca tgcgatgcgc ggcatcggtg taggcgtccc acttgccgat cgccgccacg
      541 tccatcggcg agatcttcca ctgcttgagc ggatcgtggc gccggtcgtg gaagcgcttg
      601 agctgcgttt cgcggccgat ggcgagccag aacttgaaca ggtggatgcc gtcgcgcacc
      661 agcatgcgct cgaagcgcgg cgcttcgtcg aggaacgcat cggtctgctc cggtgtgcag
      721 aaccccatca ccggctcgac tcccgcccga ttgtaccacg aacggtcgaa cagcgcggtt
      781 tcgccggccg ccggaagcca gtcggcgtag cgctggaaat accactgcgt gcgttcgcga
      841 tcggacggct tgggcagcgc cacgtccagc cagtaccggc cgttgagatg ctcgcgaaac
      901 ctgtcgatgg ccccgccttt gccggcggcg tcacggccct cgaagacgat gatcatgcgc
      961 ccggccgatt tgagctggaa cgcctgcagc ttcaccagct cgagctgcag ctgcccgatc
     1021 tgccgcagat attcggcatt cttgagccgt gaatcgtagg gatagccgcc agctttgagg
     1081 gcgcccttcc tgacccattt gggcagttcg ggatcgtcga tatcgaaact cttgtcgccg
     1141 tcggccatga acgtctccga tggcgaacgt gcatccccgc cgcttttgtg gcaagtgccg
     1201 ccggacggcc ttggttagcg gcctgcaacg gaggcgtcga tggcggacac cttgtcctcg
     1261 gaccagcagt tggccctgct gggcggcctc gccgacgcgc tgcccgaccc ctgcctgctg
     1321 ctcgaccgcc gctccgtcgt gctgcaccgc aatcccgccg ccgcccggga catgccggag
     1381 atcgccgagg gcagcctgct gaccctcgcg ctgcgcaatc cggcgctgct gagcgccatc
     1441 gacacggcgc ggcggaccaa cctcgcccag tcggtcgagc tgcaccagac agtccccaac
     1501 gagacctggc atcgcgctta cgtggcgccg ctgccggccg gcgacggcat gctggcgctc
     1561 accctccaca gcctcaccga ccagaagcgg ctcgagcagc tgcgctccga tttcatcgcc
     1621 aacgccagcc atgagctgcg cacgccgctg acctcgctgg tcggcttcat cgataccctg
     1681 ctcggcccgg cggcgcgcga cgaggcggcc cgcgagcggt tcctgggcat catgcgccag
     1741 caggcggcgc gcatgtcggc gctgatcgac gatttgctgt cgctgagccg catcgaactg
     1801 cgccagcacc tcaagcccac cggctcggtc gatctggtgc ggctcgtcga ggaggtgcgc
     1861 gacggcctcg agacccaggc ggcggaggcg gccgtcaaga tcggcctcgg cgggctcgat
     1921 agcgccgtcg tcaccggaga tccggcggag ctttacgagg tgttcgaaaa cctcatcgac
     1981 aatgccatca aatatggtgc cgacggcggc agcatcgatg tcgcgataac cgccggccgc
     2041 gccggctacg actacgccgt gaccgtcacc gaccacggcg ccggcatcgc gcaggagcac
     2101 gtgccgcgcc tgaccgagcg gttctaccgc gtcgatgccg aatccagccg caagaagaag
     2161 ggcacgggcc tcgggcttgc catcgtcaag cacatcatca accgccaccg cggcctgctc
     2221 accattcgca gcaaacccgg ggagggcacg cgggtcgaac tgctcctcaa tcggtagctg
     2281 tcggaattgc cgattatgtt caacgcatta acccgtcaca caagcgtctc ccaactgaca
     2341 taaaagctga ggcaacgacc catacgactc ccgcctgtca ggcctgcggc atccggcccg
     2401 cctgacgggg gctctgcccc gatctgttcg aaagggacat gacatgaaac acgcaattct
     2461 gagcggcatc gcggcgctgg ccgtcgctgc cgccctgact ggaacggcgc tcgccgccga
     2521 tatctccggc gccggttcga ccttcatcta tccggtcttc gccaagtggg ccgatgccta
     2581 caagaccgcc accggcacag gcctcaacta ccagtcgatc ggctcgggcg gcggcatcaa
     2641 gcagatcgag gccaagaccg tgaccttcgg tgccaccgac aagccgctca gcgacgacga
     2701 gctggccaag aacggcctga tccagttccc gatgatcatg ggcggcatcg tgccgatcgt
     2761 gaacatcgac ggcgtcaagc cgggtgattt ggtgctcgac ggcaagaccc ttgccggcat
     2821 cttcatgggt accatcacca gctgggacga cccctcgatc aaggccctca acgccagcct
     2881 cagcctgccg tcggccccga tcgtcgtcgt ccaccgctcg gacgggtcgg gcaccacctt
     2941 caacttcacc gatttcctcg gcaaatattc cgacgactgg cagaccaatg tcggttccga
     3001 cactgcggtc gagtggccgg tcggcatcgg cgccaagggc tccgagggcg tcgccaatac
     3061 cgtcaagcag actatcggca gcatcggcta cgacgagtac gcctacgccg cccagaacaa
     3121 tctgagctat gccaagatgg tcaacgccgc cggcaaggtc gtggcgccgt cgctcgacac
     3181 cttcaacgcc gccgccagca acgccgactt cgccgacgcc aagaacttca acctcgtgat
     3241 caccaaccag ccgggcgaca agtcatggcc gatcgcagca tcgacctggg tgctgatcca
     3301 tacccagccc gatgacgccg ctgccgccgg cgaagccctg aagttcttcg actgggccta
     3361 caagggcggc aaggagcagt ccaaggcgct cgactacgtg tcgatccccg acccgctcgt
     3421 ggcgctgatc gagaagtcgt ggtcggc
//
LOCUS       DATAZA010000303        18897 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2120419, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000303 DATAZA010000000
VERSION     DATAZA010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 18897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18897
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2120419"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..425)
                     /locus_tag="VHZ56_07600"
     CDS             complement(<1..425)
                     /locus_tag="VHZ56_07600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX4297872.1"
                     /translation="MAFLSDAILRIAPSATVAISRKAADMKRAGRDVISLAAGEPDFD
                     TPANVREAAARAIAAGKTHYTNVDGIAELKEAVARKFKRDNGLEVTAADCMVSSGGKQ
                     IIFNALLATLNPGDEVVIPAPYWVSYPEIVRFCDAVPVFA"
     gene            complement(495..1004)
                     /locus_tag="VHZ56_07605"
     CDS             complement(495..1004)
                     /locus_tag="VHZ56_07605"
                     /inference="COORDINATES: protein motif:HMM:NF027482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4864 domain-containing protein"
                     /protein_id="HEX4297873.1"
                     /translation="MARLAWFGILVPLVALAWPVAADDTSSASSAPASSAPEASTPPP
                     PAVAPTVDPAEAANWQAVIDGQVQAFRDHNGSVALSFASAAFQGEFTDPAAFLAAIIG
                     SGYGPIADSRSDSFGPYQYFAPDTVYQDVKFIDNDQTLYEAIYALTKEPGGWRVAGVQ
                     MAKTPGVGA"
     gene            1150..1449
                     /locus_tag="VHZ56_07610"
     CDS             1150..1449
                     /locus_tag="VHZ56_07610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297874.1"
                     /translation="MPEPSIKSGRVQGFLTAAVVSFSLTLLAAGIAVLSGLAPLHAAS
                     SGQRVDIGALLLVVPLVALVLAMAIEVARIALRGTELPQPPPRALPARSPAHPEG"
     gene            1572..1997
                     /locus_tag="VHZ56_07615"
     CDS             1572..1997
                     /locus_tag="VHZ56_07615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX4297875.1"
                     /translation="MQVENILQSKGRAVLTVSARATIGEAVDILNRHRIGAVVVTDGG
                     KLAGILSERDVVRHLGRNWSELADRTVAEVMTRDVVTTGRSASVGEVMETMTERRIRH
                     LPVVEGGELLGIISIGDVVKRKIEETEQEAIALKQYIAS"
     gene            2284..2931
                     /locus_tag="VHZ56_07620"
     CDS             2284..2931
                     /locus_tag="VHZ56_07620"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEX4297876.1"
                     /translation="MKSSIALAALVAASLGLGAILPAAAQDAAPSPPPAAAATPDQTM
                     ADPDQGLLDLFLPDSGTSDARFMMPGPGGMGRGGMGRGGGILALACSPKGAEALDVLL
                     VHLQYRLDLTDTQKPLFDAFRTKALTTETSFADTCKSSLPDRSADAKPDMLSRLKAGL
                     AVDQAKLTALNDVLPDFEALYDTLTDQQKAALAPHHMGGGGMNRMDRGGQDDGRS"
     gene            3126..4352
                     /locus_tag="VHZ56_07625"
     CDS             3126..4352
                     /locus_tag="VHZ56_07625"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX4297877.1"
                     /translation="MSLPLDPARIRAEFPSFRQPDLKDFAFFENAGGSFTCAAVLNRM
                     RSYYWNTKVQPYGAYPASRAAGDAMDEAHRRMAQALNVAADWIHFGPSTSANTYALGR
                     AFESWLRAADAVIVTNQDHEANSGAWRKLASRGIEIREWRVDPQTGHLNIADLDKLLD
                     SKVRLVAFPHASNIVGEINPVADIVRKAKAYGAVTVVDGVSYAPHGLPDVLGLGCDIY
                     LFSAYKTYGPHQGVMAVRPSLAAELPNQGHFFNETQPRKRLVPAGPDHAQIAAAAGIV
                     DYLEKVADIAGIKVQGAGPFRIAHNAMRAQETELIAPLLDYLRQKNGVRLIGPDDPAR
                     KVPTVSIVVDRPATHVAGMISRHNIGLAGGHFYAYRLLEAVGINPAHGVLRMSFVHYT
                     TPEEIDRLIKALDAEL"
     gene            4363..5274
                     /locus_tag="VHZ56_07630"
     CDS             4363..5274
                     /locus_tag="VHZ56_07630"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX4297878.1"
                     /translation="MSRPLAVLLLVICTMLWGFAFVAQKTAMGAMGPLTFSAVRYLLG
                     ALLVAPFAVWEYRRRQSRAAPLTRGQWVRIGILSLAFFLGVWSQQAALQTTTATDGGF
                     LTSLYVIFTPIVTYLTVRARPHPIVYAGAPLALVGIYLLTGARFDAFTTGDFLLLLCA
                     VCWAVQVSMLGTLVRETNLPIAISTINFLATALLATIGALVLEHPTFGGIGAGWIEIL
                     YSGVMSTAIAFSLQAIGQQYVPPANAAIILSAESLFSALGGALLLGERLPPLGYAGAA
                     LIFAAIVMVETIPAWRARRASTSPGSA"
     gene            complement(5252..5656)
                     /locus_tag="VHZ56_07635"
     CDS             complement(5252..5656)
                     /locus_tag="VHZ56_07635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297879.1"
                     /translation="MKKLLRATLAIGAAGLMAAGPLGALAADNALGMYQTTDRKMDYQ
                     LALCGTTAKNLCVTLVAARGSALTAKTKPFVGKYVVDQAKPDGSNKWKGAMHVAGYTV
                     NGTLTLNPGKSFVMHGCAYVVVCQDFTLIPAK"
     gene            6018..6617
                     /locus_tag="VHZ56_07640"
     CDS             6018..6617
                     /locus_tag="VHZ56_07640"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004797 - thymidine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HEX4297880.1"
                     /translation="MAKLYFSYSTMNAGKSTLLLQASYNYRERGMRTLLYTSALYADG
                     DVGRIVSRIGISADADLFTADDDMFDRIRQETLAGRVDCVLVDEAQFLTEDQAWQLAR
                     VADRLGIPVMAFGLRVDFQGRLFPGSQALLAIADSLREIRTICYCGAKATMVVRKDAQ
                     GRVITEGSQVSIEKSIYVSLCRRHWEEETGRWPVLGPAE"
     gene            6614..7000
                     /locus_tag="VHZ56_07645"
     CDS             6614..7000
                     /locus_tag="VHZ56_07645"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEX4297881.1"
                     /translation="MTDPLEPQGALTIRTLAMPADTNPAGDIFGGWVMSQMDIAGAIA
                     AVERARGRVVTVAVEAMSFIAPVKVGDILCVYTRLDGTGTTSLTIAVEAWARRDRLDD
                     RVKVTEGRFVYVALGQDGRKRSLPKA"
     gene            7304..7888
                     /locus_tag="VHZ56_07650"
     CDS             7304..7888
                     /locus_tag="VHZ56_07650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297882.1"
                     /translation="MSPFARLALAAGALLLSVFPVAAVQPMGSGAWTDDGGWVNTASE
                     LFHGPGPQYGEIGTVGGGLRVRVDRCSGLWCQIHAKNLSGWMRLGDLSFGQFPAGSPE
                     SRAVYPIRFGGPVCFYSGSNFTGEQTCYSQGAVTRDLLLAGRDNSFASVKVNGGSVLA
                     CRDRFFRSYCVILNKDERHLEPLLSRSISSIEVY"
     gene            8028..8438
                     /gene="msrB"
                     /locus_tag="VHZ56_07655"
     CDS             8028..8438
                     /gene="msrB"
                     /locus_tag="VHZ56_07655"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020184401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEX4297883.1"
                     /translation="MLKTYPVTRSDAEWRQRLDPEQYEIMRGHGTEAPGSCALLLEKR
                     PGTFSCAGCDTPLFEGKVKFESGTGWPSFNEPIPGSVETETDRRYGMDRTEVHCATCG
                     SHLGHIFNDGPPPTGQRYCINGIALNFTPARPNA"
     gene            complement(8435..8782)
                     /locus_tag="VHZ56_07660"
     CDS             complement(8435..8782)
                     /locus_tag="VHZ56_07660"
                     /inference="COORDINATES: protein motif:HMM:NF022279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YrdB family protein"
                     /protein_id="HEX4297884.1"
                     /translation="MIQSLRSGNLLLAFLMEVAMLAAFCVAGWSLGTAIWLRIVLAVG
                     LPGVAIAAWAAWAAPRAGKRRLKMPALLIFKIVMFALATAAWWVAHQEFFAAVFAVLA
                     AINLAAAALFRQV"
     gene            complement(8831..9121)
                     /locus_tag="VHZ56_07665"
     CDS             complement(8831..9121)
                     /locus_tag="VHZ56_07665"
                     /inference="COORDINATES: protein motif:HMM:NF022603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2934 domain-containing protein"
                     /protein_id="HEX4297885.1"
                     /translation="MSTSSADKQTAIREQAYYFWEQDGRPHGREHEYWMRATVAVADR
                     DQMGTLTEAAPRKTGKPKDSGGMAKAGLAANKAKAPPAKSAKPDPKASPKKK"
     gene            complement(9245..10828)
                     /locus_tag="VHZ56_07670"
     CDS             complement(9245..10828)
                     /locus_tag="VHZ56_07670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007631848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEX4297886.1"
                     /translation="MADTTAGTIAAAAQSSSMPTRRIIAFFFMVVGMFMAILDIQVVS
                     ASLSEIQAGLSAGSDEIAWVQTSYLIAEVIMIPLSGTLARILSTRVLFTIAAAGFTAA
                     SALCATATSIDQMIVYRAIQGFIGGGMIPSVFAAAFTIFPRDKRAIVSPIIGLTATLA
                     PTIGPTVGGYLTSTLSWHWLFLINVFPGIIVAAMAWLLIDFDKPEKGLFAKFDWIGLV
                     GLAAFLGSMEYVLEEGPGHDWLNDQSVMIFTVVMVLGGILFFWRALRVEFPVVDLSAV
                     RDVNFSVGSIFSFVLGIGLYGLTYIYPLFLGRIRGYDSMMIGETLFVSGLAMFLTAPI
                     AGVLSNKMDLRVMLMFGFILFAAGTWSATQITDDWSFAELLVPQILRGVGLMLCMVPI
                     NNLALGTLPPQKLKGASGLFNLTRNLGGAVGLALINTVLSNRTVLHVERLSEGINLGN
                     PATVAQYNSMSANDTANGLDGATAAIQQLGQMVQKQAYVLSFIDVFMLLTLLFGLLAL
                     GALLMNKPAPAPAGAGGGH"
     gene            complement(10857..12035)
                     /locus_tag="VHZ56_07675"
     CDS             complement(10857..12035)
                     /locus_tag="VHZ56_07675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018901985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEX4297887.1"
                     /translation="MAQSQNTEKVTRFPAPPAHDEATPAPTSEATVAEAAAPVAAKPA
                     KKRSLRPVILSGVGIVALIAAGWFGYNWFTTGRFIISTDDAYVGGDIATISSKLAGYV
                     ASVDVVANEAVKKGDPLVTLDDGDYTIARDQAQAAMDTQNLTLSRINAQIGGAQAAVD
                     QANAQKQALIAAQKNAALAQQRAAQLQQTSVGSQATLDQANAALDQANANLTAGDAQI
                     EAATANIAVLKGQLAEAGGQLKSLGLARDKAVRDLSFTVLRAPYDGVVGNLSVQTGDL
                     VSAGAHLASLVPTGALYVDANFKETQLGDLVPGEKVTVQVDALDGQAFTGTIQSLAPA
                     SGSVFSLLPAENATGNFTKVVQRVPVRIALPADALASGKFRAGLSVVVEVDTRSGSQN
                     "
     gene            12159..12809
                     /locus_tag="VHZ56_07680"
     CDS             12159..12809
                     /locus_tag="VHZ56_07680"
                     /inference="COORDINATES: protein motif:HMM:NF025605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX4297888.1"
                     /translation="MHETEVSTEDAPKGRRVAGQDPVKRNQILDGAKTCFMDMGFDAA
                     SMNEITATAGVSKGTLYVYFEDKAALLEALIEREKSAALSAFAQTLNAGGSSREALTR
                     FGIQVTSRLTSPEVIRAQRMVLGIADRMPGIAQRFFSGDTFSAHQSLKDFLDARPQEF
                     AIDDTDLAARQFLELSMASIYKRRLFGNLAAAAAPEEIAYVVGRGVDMFVSYYGRK"
     gene            12932..13261
                     /locus_tag="VHZ56_07685"
     CDS             12932..13261
                     /locus_tag="VHZ56_07685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297889.1"
                     /translation="MPIKSVAVKPAGRAGGRKSAPPPEIETTGPLEVAISRHQRPGIA
                     ARPTHRYHVGERLRMSNGGRSFARDEAFCKVVSLLPYEGHGSLLYRVRSDTEQFERIV
                     IEGDLAR"
     gene            13733..13939
                     /locus_tag="VHZ56_07690"
     CDS             13733..13939
                     /locus_tag="VHZ56_07690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010439113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX4297890.1"
                     /translation="MVEGTVKFFNSTKGFGFIQPTNGGKDAFVHISAVERAGLSGLAE
                     GQKVSYELETGRDGKQSATNLSLL"
     gene            14155..14613
                     /locus_tag="VHZ56_07695"
     CDS             14155..14613
                     /locus_tag="VHZ56_07695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016848135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX4297891.1"
                     /translation="MPAAAAKPADDADRTLALAGDLRVVIGRLSRRLRDEAHFGDFSF
                     SEIKVLTRLDRNGPATVTALAEAEGVRPQSMSATVSALKAAGLVSGASDPADGRQTVL
                     SLTAHCRQLLETTRAAKRDWLFREIQSRFTPAEQARLAAAVALLDRLIDP"
     gene            14631..15197
                     /locus_tag="VHZ56_07700"
     CDS             14631..15197
                     /locus_tag="VHZ56_07700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011475113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HEX4297892.1"
                     /translation="MPVTTLDPKTALVVLDLQEGIRNFAKGDGPDAVFKAAGSLCAAF
                     RHHHLPVVLVNVDAAAPGRTESPRRVLSFPPEALQFVPQLDQQATDIVVTKKTWGAFA
                     STDIEKRLRALGVTQVVLAGISTTSAVESTARQAFEAGFNVTVALDAMLDMNPQAHDN
                     AVKNTFPRLGETGSSADIIALLDRTASA"
     gene            15197..16900
                     /locus_tag="VHZ56_07705"
     CDS             15197..16900
                     /locus_tag="VHZ56_07705"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4297893.1"
                     /translation="MTDSLASSAAMPAGAPATVSPRYKWLALSNTTVGVLLATIDTSI
                     MLIAMPQIFRGIGLNPLESGNTFYLLWMILGYQIVSSVLVVSLGRLGDMFGRVRMYSL
                     GFAIYTIASLILTLDPFMGQPGALFLIIGRLVQGVGAAFLVANSAAILTDAFPANQRG
                     LALGINNVAGISGNFIGLVLGGLLAAINWRLVFLVSVPFGIFGTIWSYMKLRELGQRR
                     RARIDWAGNVTFAIGLVMVMVGITYGIEPANGQPMGWTSVPVLSLLIGGAIFLAAFGI
                     IETRVAEPMFRLPLFKIKAFTFGTLSTFLSAVGRGGLMFMLIIWLQGIWLPSHGYSFE
                     QTPLWAGILMLPLTAGFLLAGPVSGFLSDHLGARWFATGGMLGAAVTFLLLLLLPIDF
                     NYWVFAGILLLNGLAMGAFAAPNRAAIMTSLPAADRGAGGGMNSTFQNSANVLSIGIF
                     FTLMIVGLSGTLATTMVQGLTAHGVPQAIAESVGRLPPVSILFAAFLGYNPIQTLVGQ
                     DVLGHLSQSDQAALTGSTFFSNLIAGPFHSGLAEAFIFATIACLIAAAASWSRGGKPA
                     A"
     gene            16997..18439
                     /locus_tag="VHZ56_07710"
     CDS             16997..18439
                     /locus_tag="VHZ56_07710"
                     /inference="COORDINATES: protein motif:HMM:NF042645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6600 domain-containing protein"
                     /protein_id="HEX4297894.1"
                     /translation="MHSFRPLLFGLASATAVALLPLGPVAAPLGIEASYAQSASVSID
                     VFFDKLAPSGVWVQHPQYHYVFCPKVDANWRPYTNGHWVYLKSYGWYFASDEPFAWAV
                     YHYGRWFEDQKLGWCWVPGNAWAGAWVSWRQGNDYVGWAPLEPDHDGFAVDVDVNKAE
                     QPQRDWVFVKPARFLQPNLNVEIVAGDRQPDAFQKTKFDGPVVVKNNIVINTVIDINF
                     IQQQTKTKVVVVDPKPVDDPSKAGKDASGTTIAVFSPQIPPPKQDEKPKQSVNEDQAQ
                     QQLGTKGPGASSSAESSMSSSAPSSSEASSSMSSSAAASSSAAPSSAASSSEAASSSA
                     AASEPPSSAMSSSEAPSSAMASSAMEASSSSEAPKPVSSLEPKAVASSELSSSSEEPR
                     ASSSAEAKPQPSSSEERPASSSEERRPSSELVSSSSEEPPAPAKAQASSEQPKAAPAQ
                     EKPKPKLVCPDGQEIVDGKCVPIPASSKSK"
     gene            complement(18479..>18897)
                     /locus_tag="VHZ56_07715"
     CDS             complement(18479..>18897)
                     /locus_tag="VHZ56_07715"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX4297895.1"
                     /translation="LALQLGATHVVDPGGGDVVAAMADIVPVGVDVAMECAGVPETFT
                     QSLAAVRRGGTAVLFGVMAKGTTVAVEPFDLLFREVRLVPAYLNPQTHQRAAAMIAAK
                     TLQLMPLISRVVGIADIATELAAEPRAGDVKVMVRS"
BASE COUNT         2954 a         7142 c         5680 g         3121 t
ORIGIN      
        1 gcgaacactg gaacggcgtc gcagaaccgc acgatctcgg gatagctcac ccagtacggc
       61 gccgggatca cgacctcatc gccggggttg agcgtcgcca gcagcgcgtt gaagatgatc
      121 tgcttgccgc ccgagctcac catgcagtcc gccgccgtga cctcgaggcc gttgtcgcgc
      181 ttgaacttgc gcgccaccgc ttccttgagc tcggcaatgc cgtcgacatt ggtgtagtgc
      241 gtcttgcccg ccgcgatcgc ccgcgccgcc gcttcgcgca cgttggccgg cgtatcgaag
      301 tccggctccc cggcggccag cgagatgaca tcccgcccgg cgcgtttcat gtccgcggcc
      361 ttgcgcgaga tggcgaccgt cgcggacggt gcgatgcgca ggatggcgtc ggatagaaag
      421 gccatggaac actcccggat tgcaggccgg ggagtgatag gcggcagcgg tcgcgaaggc
      481 aacgctggcg cgggctaggc gccgaccccc ggcgtcttcg ccatctgcac cccggcgacg
      541 cgccagccgc ccggctcctt ggtcagcgcg tagatggcct cgtagagcgt ctggtcgttg
      601 tcgatgaatt tcacgtcctg gtacaccgtg tcgggcgcaa aatactgata cgggccgaag
      661 ctgtcggacc gcgaatccgc gatcgggccg tagccgctgc cgatgatcgc cgcgaggaac
      721 gccgcggggt ccgtgaactc gccctggaac gcggcactgg caaagctcag cgccaccgac
      781 ccgttgtggt cgcgaaacgc ctgcacctgc ccgtcgatga cggcctgcca gttcgccgcc
      841 tcggccggat cgaccgtcgg cgcgaccgca ggcggcggcg gcgttgaggc ctctggcgcc
      901 gagctcgccg gcgctgacga cgctgacgac gtatcatcgg ccgccaccgg ccacgccaga
      961 gccacgaggg gaacaaggat gccgaaccat gcgagccgcg ccatcggaag cctccgccgg
     1021 atgccgggct ctgcagtcgc cacattggcg ccgccaattg gtccacgcat ctccgcacta
     1081 gctacgtgga atatccgcat tggtttggcc agatcacggc cttgtgaatg attgcgtgag
     1141 ttctccaaaa tgcctgagcc ttccatcaaa tccggccgcg tccagggttt cctgaccgcc
     1201 gccgtcgtct ccttctcgct gaccctgctc gccgccggca tcgccgtgct ctccggcctg
     1261 gcgccactcc atgccgcgag ctccggccag cgcgtcgaca tcggggccct gctgctggtg
     1321 gtgccgctgg tggcgctggt cctcgccatg gcgatcgaag tcgcccgcat tgccctgcgc
     1381 ggcaccgagt tgccccagcc cccgccgcgt gcgctccccg cccggtcgcc cgctcacccc
     1441 gagggctaga aggccgttca agcccgcgag agtcgcaggt ccgccgggcc cccggccaga
     1501 aaggacagag cctctgcctt ttccggctcg tcccgcaggc gcacactgac tgcccgaagg
     1561 aggaacccac gatgcaagtc gaaaatatcc ttcaatccaa aggccgggcc gtcctcaccg
     1621 tcagcgcccg cgccaccatc ggcgaagccg tcgacatcct caaccgccac cgcatcggcg
     1681 ccgtggtcgt caccgatggc ggcaagcttg ccggcatcct cagcgaacgc gatgtggtgc
     1741 ggcacctcgg ccgcaactgg tccgagctgg ccgatcgcac cgtcgccgag gtgatgaccc
     1801 gcgacgtcgt caccaccggc cgcagcgcct cggtcggcga ggtcatggag accatgaccg
     1861 agcgccgcat ccggcacctg ccggtggtcg agggcggcga gctgctcggc atcatttcga
     1921 tcggcgacgt ggtcaagcgc aagatcgagg agaccgagca ggaagccatc gcgctcaagc
     1981 agtacatcgc ctcctgaggc ggcggcttcg cgctggcgct tccctgcctc gttgctccgg
     2041 cggccggtct tcggctggaa ttttcggccg ggagaacatc gtttcaccac cctgcctccc
     2101 ccgatggccg gtcgcttgga ccggcggccg cgtccctgat ttgactcaaa ttgcccgtcg
     2161 gccggtcacg gaatcgtcct ttccaagctg tccaaagctt catcccgccg caatttcagg
     2221 gcgggcgacg cgctgtagtc tcagtgcatc ggatcaccga tccacaccca caaggagcct
     2281 agcgtgaaat cctccatcgc cctcgctgca ctcgtcgctg ccagcctcgg cctcggcgcc
     2341 atcctgccgg ccgccgctca agatgccgcc ccgtctccgc cacccgccgc cgctgcgacc
     2401 cccgaccaga ccatggccga ccctgaccag ggcctgctgg acctgttcct gccggattcc
     2461 ggcacgtccg atgcgcgctt catgatgccc ggaccgggcg gcatgggccg cgggggcatg
     2521 ggccgcggcg gcggcatcct ggcgctggcc tgttcgccca agggcgccga ggcgctcgac
     2581 gtgctgctcg tccacctgca gtaccgcctg gatctcaccg acacgcagaa gccgctgttc
     2641 gatgccttcc gcaccaaggc gctcaccacc gagacgagct tcgccgacac ctgcaaatcg
     2701 tcgctgccgg atcgctcagc cgatgccaag cccgacatgc tgtcgcggct caaggccggc
     2761 ctcgcggtcg accaggccaa actgacggcc ctcaacgacg tgctgcccga cttcgaggcc
     2821 ctctacgaca ccctcaccga ccagcagaag gccgcccttg cgccgcatca catgggaggc
     2881 ggcggcatga accgcatgga tcgcggcggc caggacgacg gccgcagctg agaccgaagc
     2941 aaaacccggc ggctcctctt gccgccggac ggcgcggccc acgcgccgcg tgagctccgg
     3001 ccggtccggg agcactccct cgcgccgttt tccggccccg gatgcccccc acccggaacg
     3061 gccggagctt ttctttgccg gggggaaggt ctaggagagg cgaccgcaaa aaggccctcc
     3121 ccgcgatgtc cctgcccctt gatcccgcgc gcatccgggc cgagttcccc tcgttccggc
     3181 agcccgatct caaggatttc gcgttcttcg agaatgctgg cggctccttc acctgcgccg
     3241 cggtcctcaa ccgcatgcgg tcctactact ggaacaccaa ggtccagccc tacggcgcct
     3301 accccgcttc gcgcgccgcc ggcgacgcca tggacgaggc ccaccgccgc atggcgcagg
     3361 ccctcaacgt cgctgccgac tggatccatt tcggcccctc gacctcggcc aatacctatg
     3421 cgctcggccg cgccttcgag agctggctcc gtgccgccga cgccgtgatc gtcaccaacc
     3481 aggaccacga ggccaactcc ggtgcctggc gcaagctcgc ctcgcgcggc atcgagattc
     3541 gcgagtggcg ggtcgatccg cagaccggcc acctcaacat cgccgatctc gacaagctgc
     3601 tcgattcgaa agtccgcctc gtcgctttcc cgcatgcctc caacatcgtc ggcgagatca
     3661 acccggtcgc cgacatcgtc cgcaaggcca aggcctacgg cgccgtgacc gtggtcgacg
     3721 gcgtctccta cgccccgcac ggcctgcccg acgtgctcgg gctgggctgc gacatctacc
     3781 tgttctcggc ctacaagacc tacggcccgc accagggcgt catggccgtg cgcccctcgc
     3841 tcgccgccga gctgcccaac cagggccatt tcttcaacga gacccagccc cgcaagcgcc
     3901 tcgtcccggc cggccccgac catgcccaga tcgccgccgc tgccggcatc gtcgactatc
     3961 tcgagaaggt cgccgacatc gccggcatca aggtgcaggg cgccgggccg ttccgcatcg
     4021 cccacaacgc catgcgcgcc caggagaccg agctcatcgc gccgctgctc gactatctgc
     4081 gccagaagaa cggcgttcgc ctgatcggcc ccgacgatcc ggcgaggaag gtgccgaccg
     4141 tctcgatcgt cgtcgaccgc ccggccaccc acgtcgccgg catgatctcg cgccacaata
     4201 tcggcctcgc cggcggtcat ttctacgcct accgcctgct cgaagcggtc ggcatcaatc
     4261 cggcccacgg cgtgctgcgc atgtcgttcg tgcactacac cacgcccgaa gaaatcgacc
     4321 ggctgatcaa agccctcgac gccgagctct agccggcaac cgatgtcgcg tccgctcgcc
     4381 gtcctgctgc tcgtcatctg caccatgctg tggggctttg ccttcgtcgc ccagaagacg
     4441 gcgatgggcg ccatggggcc gctgaccttc tccgccgtcc gctacctgct cggagcgctg
     4501 ctggtcgcgc cctttgccgt ctgggagtat cgccgccggc aaagccgcgc cgccccgctc
     4561 acccgcggcc agtgggttcg catcggcatc ctcagcctgg cgtttttcct cggcgtctgg
     4621 tcgcagcagg cggccttgca gaccaccacc gccaccgatg gcgggttcct cacctcgctc
     4681 tatgtgatct tcaccccgat cgtcacctac ctgacggtcc gcgcccgccc gcacccgatc
     4741 gtctatgccg gcgccccgct ggcgctcgtc ggcatctacc tgctgaccgg cgcccgcttc
     4801 gacgccttca ccaccggcga tttcctgctc ctgctgtgcg ccgtgtgctg ggcggtgcag
     4861 gtctcgatgc tgggcacgct ggtgcgcgag accaacctgc cgatcgccat ctcgaccatc
     4921 aatttcctcg ccaccgcgct gctcgccacc atcggcgcgc tggtcctcga gcacccgacc
     4981 ttcggcggca tcggtgcggg ctggatcgag atcctctatt cgggcgtgat gtcgacggcg
     5041 atcgcctttt cgctgcaggc catcggccag caatacgtgc caccggcgaa tgcggcgatc
     5101 atcctctccg ccgagagcct gttttccgcc ctcggcggcg ccctgctgct cggcgagaga
     5161 ttgccgcccc tcggctatgc cggggcggca ctcatcttcg ccgccatcgt gatggtcgag
     5221 accatccccg cctggcgcgc ccgccgcgcc tctacttcgc cgggatcagc gtaaagtcct
     5281 ggcacaccac cacgtaggcg cagccgtgca tgacgaagct cttgcccggg ttgagcgtca
     5341 gcgtgccgtt caccgtgtag ccggcgacgt gcatcgcgcc cttccacttg ttgctcccgt
     5401 cgggcttggc ctggtcgacc acgtacttgc ccacgaacgg cttggtcttg gcggtgagcg
     5461 ccgagccgcg cgccgcaacc agcgtcacgc acaggttctt ggcggtcgtg ccgcacagcg
     5521 ccagctggta gtccatcttg cggtcggtgg tctggtacat gccgagcgca ttgtcggccg
     5581 ccagggcacc cagcggaccc gccgccatca gtcccgccgc gccgatcgcc agagttgccc
     5641 gcaacaattt tttcattccg atttccttat cgaccctggg aacagtcccc gcccgatctt
     5701 gcggcggaat gggactgaag taaggctcag cgagcgtcat ccccacgtca tcaccctgtc
     5761 accgcggccg cctagcgtcg gcagtgtccg gtccacccca accgccggac agccctgacc
     5821 ggttctgcaa ccgtcggggc ccactacaag ggcgccgccc gccaaatccg gtgccctgcc
     5881 gaacccgatc ggcccgcggc cgccctcacc cggcggccgc gctttttcgc cgcgtcgcgc
     5941 gtcgcgcccg gtttcctgtt gagcgcgccg cccgccccgc ttgtgccgcg cccctcgcct
     6001 cgggcatatc gggcgcgatg gccaagctgt atttctccta ctcgacgatg aacgcgggca
     6061 agtcgacgct gctgctgcag gcctcgtaca actaccgcga gcgcggcatg cggaccctgc
     6121 tctacacatc ggccctgtat gccgacggcg atgtcggccg catcgtgtcg cgcatcggca
     6181 tttccgccga cgccgacctg ttcaccgccg acgacgacat gttcgaccgc atccgccagg
     6241 aaaccctcgc cggccgggtc gattgcgtgc tggtcgacga ggcgcagttc ctcaccgagg
     6301 accaggcctg gcaactggcc cgcgtcgccg accgcctcgg catcccggtg atggccttcg
     6361 gcctgcgcgt cgatttccag ggcaggctgt tccccggctc gcaggcgctc ctcgccatcg
     6421 ccgattccct gcgcgaaatc cgcaccatct gctattgcgg ggccaaggcc accatggtcg
     6481 tgcgcaagga cgcgcagggc cgcgtcatca ccgagggcag ccaggtgtcg atcgaaaaat
     6541 ccatctacgt ctccctctgc cgccgccact gggaagaaga gaccggccgc tggccggtgc
     6601 tgggaccggc ggaatgaccg acccgctcga gccgcagggc gcgcttacca tccgcaccct
     6661 cgccatgccc gccgacacca atcccgccgg cgacatcttc ggcggctggg tgatgagcca
     6721 gatggacatc gccggcgcca tcgccgccgt cgagcgcgcc aggggccgcg tcgtcactgt
     6781 cgcggtcgag gccatgagct tcatcgcccc ggtcaaggtc ggcgatatcc tctgcgtcta
     6841 cacccgcctc gatggcaccg gcacgacctc gctcaccatc gccgtcgagg cctgggcccg
     6901 tcgcgaccgg ctcgacgatc gcgtcaaggt caccgagggg cggttcgtct acgtggcgct
     6961 cggccaggac ggccgcaagc gttcgctgcc gaaggcctga cccgccgcac cgcggggaac
     7021 cgcgcgccgc agcaggcgtt gctggctcaa cccaaactgc aattgcggcc ggcgcacctg
     7081 tctcgcctca cacccgcctc gctgtttccc gcaccggccc gattgcatcc tcatctcgtc
     7141 tcctcgcgtc aggtaggacc tccatgtcgg acgcagcggc gagacggggg cgtcgtgccc
     7201 cgcacggcgc cccctgattt atcccccgac tgttgcggcc tcgcccttcc agcagtgccg
     7261 gtgagccgat aggctcgctg cagttgccgc ataggggtta tcgatgtcgc ctttcgcccg
     7321 tctcgcactc gctgccggtg cattgctgtt gtcggtgttt cccgttgcgg cggtccagcc
     7381 gatgggcagc ggcgcatgga ccgatgatgg cggctgggtg aacacggcga gcgagctctt
     7441 tcatggcccc ggcccgcaat atggcgagat cggcaccgtc ggcggcggcc tgcgtgtccg
     7501 cgtcgaccgc tgcagcggcc tctggtgcca gatccacgcc aagaacctca gcggctggat
     7561 gcggctgggc gacctgagct tcggccagtt ccccgccggt tcgccggagt cccgcgccgt
     7621 gtacccgatc cgcttcggcg gcccggtctg cttctacagc ggcagcaact tcaccggcga
     7681 gcagacctgc tacagccagg gtgccgtcac ccgcgacctg ctgctggccg gccgcgacaa
     7741 cagcttcgcc tcggtgaagg tcaatggcgg cagcgtgctc gcctgccgcg accgcttctt
     7801 ccgcagctat tgcgtcatcc tcaacaagga cgagaggcat ctcgagccgt tgctgagccg
     7861 ctccatctcc tcgatcgagg tctactgaag ctttcggctg tccggctcgg ctgacgccgc
     7921 ccgccgggcg gcgttttgct tttcgcacac gccagcctat ctctgcgggg attggcggtg
     7981 cgcggcccct cctgctacag gctcgccacc cgaaccggag gcccgacatg ctgaagacct
     8041 atcccgtcac ccgcagcgac gccgaatggc gccagcgcct cgaccccgag cagtacgaga
     8101 tcatgcgcgg ccacggtacc gaagcgccgg gcagttgcgc cctgctgctc gaaaagcgcc
     8161 ccgggacctt ctcctgtgcc ggctgcgaca cgccgctgtt cgagggcaag gtgaagttcg
     8221 agagcggcac cggctggccg agcttcaacg aaccgatccc cggctccgtc gagaccgaga
     8281 ccgaccgccg ctacggcatg gaccgcaccg aagtgcactg cgccacctgc ggcagccacc
     8341 tcggccacat cttcaacgac ggcccgccgc cgaccgggca gcgctactgc atcaacggca
     8401 tcgcgctgaa tttcacgccg gcgaggccga acgcctagac ctgccggaag agcgccgcgg
     8461 cggcgaggtt gatcgccgcc agcacggcga ataccgccgc gaaaaactcc tggtgcgcca
     8521 cccaccaggc ggcggtcgcc agcgcgaaca tcacgatctt gaagatcagc agcgccggca
     8581 tcttcagccg gcgcttgccg gcccgcggcg ccgcccaggc ggcccacgcc gcgatcgcca
     8641 cgcccggcag tcccaccgcc agcacgatcc gcagccagat cgccgtgccg agcgaccagc
     8701 cggcgacgca gaaggccgcg agcatcgcca cttccatcag gaacgccagc agcaggttgc
     8761 cgctgcgcag cgactggatc atcggagagc ctcccggccc tcccctagca gaaccgtccg
     8821 gagtcggccg ctacttcttc ttcgggctgg ccttcggatc gggctttgcc gacttcgccg
     8881 gcggcgcctt ggccttgttc gcagcgagcc cggccttggc catcccgccg ctgtccttgg
     8941 gtttgccggt cttgcgcggc gccgcctcgg tcagcgtccc catctggtcg cggtcggcga
     9001 cggcgacggt cgcacgcatc cagtactcgt gctcgcggcc gtgtggccgc ccgtcctgct
     9061 cccagaaata gtacgcctgc tcgcgtatgg cggtctgctt gtccgcactg ctggttgaca
     9121 tgcctggtct cctctcggaa tcgcgactca acaacaggag tctgcgcccg gttcctgacc
     9181 tccggccaga gtcatgcgcg aatggctggc atgccgcgcc gtgccagcgg cccgtgggcc
     9241 gccctcagtg gccgccgccg gcgcccgccg gtgccggcgc gggcttgttc atcagcagcg
     9301 cgcccagcgc cagcagcccg aacagcagcg tcagcagcat gaacacgtcg atgaagctca
     9361 gcacgtaggc ctgcttctgc accatctgcc ccagctgctg gatcgccgcg gtggcgccgt
     9421 cgagcccgtt ggccgtgtcg ttggcgctca tcgaattgta ctgcgccacc gtcgccggat
     9481 tgcccagatt gatgccctcc gacagccgct cgacgtgcag cacggtgcga ttgctgagca
     9541 ccgtgttgat cagcgccagc cccaccgcac cgccgaggtt gcgcgtcagg ttgaacagcc
     9601 ccgaggcgcc cttcagcttt tgcggcggca gcgtgccgag cgcgaggttg ttgatcggca
     9661 ccatgcacag catcagcccg acgccgcgca ggatctgcgg caccagcagc tcggcaaagc
     9721 tccagtcgtc ggtgatctgc gtcgccgacc aggtgcccgc cgcgaacagg atgaagccga
     9781 acatcagcat cacccgcagg tccatcttgt tgctcagcac cccggcgatc ggcgccgtca
     9841 ggaacatcgc cagcccggag acgaacagcg tctcgccgat catcatcgaa tcgtagccgc
     9901 ggatgcgccc gagaaacagc ggatagatat aggtcagccc gtagagcccg atgccgagca
     9961 cgaacgagaa gatcgagccg accgagaaat tgacgtcgcg caccgcgctg aggtcgacca
    10021 ccgggaactc gacccgcagc gcccgccaga agaacaggat tccgcccagc accatgacga
    10081 cggtgaagat catcaccgac tggtcgttga gccagtcgtg gccaggtccc tcctcgagca
    10141 cgtattccat cgagccgagg aacgccgcca gcccgaccag cccgatccag tcgaatttgg
    10201 cgaacagccc cttctccggc ttgtcgaagt cgatcagcag ccacgccatc gccgcgacga
    10261 tgatgcccgg aaagacgttg atgaggaaca gccagtgcca gctgagcgtg ctggtcaggt
    10321 agccgccgac cgtcggcccg atggtcggcg ccagcgtcgc cgtcagcccg atgatcggcg
    10381 acacgatcgc ccgcttgtcg cgcggaaaga tcgtgaacgc cgccgcgaac accgacggga
    10441 tcatgccgcc gccgatgaag ccctggatgg cgcgatagac gatcatctgg tcgatgctgg
    10501 tcgccgtcgc gcacagcgcg ctggccgccg tgaagccggc cgcggcgatg gtgaacagca
    10561 cccgcgtcga caggatccgc gccagcgttc ccgacagcgg gatcatgatg acttcggcaa
    10621 tgaggtagct cgtctgtacc caggcgatct cgtccgaacc ggcactgagc ccggcctgga
    10681 tttcgctcag cgacgccgac accacctgga tgtcgaggat ggccatgaac atgcccacga
    10741 ccatgaagaa gaaggcgatg atccgccgcg tcggcatcga gctgctctgt gccgccgccg
    10801 cgatcgttcc tgctgtcgtg tccgccatct ctgcctccct cgcgcccggg cctgcgttag
    10861 ttctgcgacc cggaccgcgt atcgacctcg accaccacgc tgaggccggc ccggaacttg
    10921 ccgctcgcca gcgcatccgc cggcagggcg atccgcaccg gcacgcgctg caccaccttg
    10981 gtgaaattgc cggtcgcatt ctcggccggc agcagcgaga acaccgaacc cgaggccggc
    11041 gccagcgact ggatggtccc ggtgaatgcc tgcccgtcca gcgcgtcgac ctgcaccgtc
    11101 accttctcgc ccggcaccag gtcgccgagc tgcgtctcct tgaaattcgc gtcgacatac
    11161 aacgccccgg tcggcaccag cgaggcaagg tgcgcgccgg ccgaaaccag gtcgcccgtc
    11221 tgcacgctga ggtttccgac gaccccgtca tagggcgccc gcagcacggt gaagctcagg
    11281 tcgcgcaccg ccttgtcgcg ggcgaggccg aggctcttga gctgcccgcc ggcctcggcg
    11341 agctggccct tgagcacggc gatgttggcg gtcgccgcct cgatctgcgc gtcgccggca
    11401 gtgagattgg cattggcctg gtccagcgcc gcattggcct ggtcgagggt ggcctgcgag
    11461 ccgaccgacg tctgctgcag ttgcgccgcg cgctgctgtg cgagggcggc gttcttctgc
    11521 gccgcgatca gcgcctgctt ctgcgcgttg gcctggtcca ccgccgcctg cgcgccgccg
    11581 atctgtgcat tgatccggct cagcgtcagg ttctgcgtgt ccatggccgc ctgcgcctgg
    11641 tcgcgcgcga tggtgtagtc gccatcatcg agcgtcacca gcgggtcgcc cttcttgacc
    11701 gcctcgttgg cgaccacgtc gacgctggcg acatagcctg cgagcttgga cgagatcgtc
    11761 gcgatgtcgc cgccgacata cgcgtcatcg gtcgagatga tgaagcgtcc ggtcgtgaac
    11821 cagttgtagc cgaaccagcc cgccgcgatc agcgccacga tgccgacgcc cgacaggatc
    11881 accggccgca gcgaccgctt cttcgccggc ttggcggcta ccggagcggc cgcctcggcg
    11941 accgtcgctt cgctcgtcgg cgccggagtc gcctcgtcgt gtgccggcgg ggccgggaat
    12001 cgggtaacct tctctgtgtt ctgcgactgg gccatcggtg cgcctcccaa ggcgaagata
    12061 atgaactgaa ccgttcggtt cggttgacat agcccccgcc ttgctccata tcaagcgaaa
    12121 tcgaaccgta cggttcagtt tattttggga gtgcagccat gcacgaaaca gaggtctcga
    12181 ccgaggacgc ccccaagggc cgccgcgtcg cgggacagga tcccgtcaag cgcaaccaga
    12241 tcctcgatgg cgccaaaacc tgcttcatgg acatggggtt cgacgccgcc agcatgaacg
    12301 agatcaccgc caccgccggg gtcagcaagg gtacgctcta cgtctatttc gaggacaagg
    12361 cggccctgct cgaggccctg atcgagcgcg aaaagagcgc cgcgctctcg gccttcgcgc
    12421 agaccctcaa cgccggcggc agcagccgcg aggccctcac ccgcttcggc attcaggtca
    12481 cctcccgcct cacctcgccc gaagtgatcc gcgcccagcg catggtgctc ggcatcgccg
    12541 accgcatgcc cggcatcgcc cagcgcttct tttccggcga caccttctcg gcccatcaga
    12601 gcctcaagga cttcctcgac gcccggccgc aggaattcgc catcgacgac accgacctgg
    12661 ccgcccggca gttcctcgaa ctgtccatgg cctcgatcta caagcgccgg ctgttcggca
    12721 atctcgcggc cgccgccgcc cccgaggaga tcgcctatgt ggtcggccgg ggcgtcgaca
    12781 tgttcgtgag ctactacggc cgcaaatagc ggcaaatcca gattttcgcc cgattgccgg
    12841 gcagacgtgc tagaaaaccg gacgcggtgc ggcccgcgta tcgaccatct cgacttttcg
    12901 tcccgatgga atggatacca aggaattcgc catgccgatc aaaagcgtag ccgtgaagcc
    12961 ggcaggccgg gcgggcggtc gcaagtctgc gccgccgccc gaaatcgaga ccaccggccc
    13021 gctcgaagtc gccatcagcc gccaccagcg tcccggtatc gccgcccggc ccacccaccg
    13081 ctatcacgtc ggcgagcggc tccggatgag caatggcggc cgctcgtttg cccgcgacga
    13141 ggcgttctgc aaggtcgtct cgctcctccc ctatgagggc cacggctcgc tgctctaccg
    13201 cgtccgcagc gacaccgagc agttcgaacg catcgtcatc gaaggcgacc tcgctcgctg
    13261 aacgccggat aggactcgta atttgatgat gaccacatgc aacgtaaaaa tcgacggctc
    13321 aacgaccgtc atcgatgtcc acgcagctcg cgaaaattac gcgaatctac gcggtcatct
    13381 gttctgccta ggttgcgata tgccggttca catctatccg gagaagacga ctagcacggc
    13441 atcggcccta cattttgggc atataaaggc caatccagcg tgcccgctta tgtagggtct
    13501 cacggcaaat taggacacca ccgaacgccg aggcccttgc cttttccgcg cgccgggcgc
    13561 atatgcaccc catacgcttc gctaccgtca cgcgctatct gacggcccgg ttcgccggcc
    13621 cattggctat ctcttgatct tagatgaacg tcgccggccg gcatgctgcc cccggatcac
    13681 gccccgcaag cgtcagggac cggcggggcc cttccaagaa agagatcatc ccatggtcga
    13741 aggcaccgta aagtttttca attccaccaa aggctttggc ttcatccagc cgaccaatgg
    13801 cggcaaggac gcattcgtcc acatttccgc cgtcgagcgg gccggcctgt ccggtctcgc
    13861 cgaaggccag aaggtcagct atgagctcga gaccggccgc gacggcaagc agtccgcgac
    13921 caacctctcg ctcctctgag cttcgcatat cggagaggcc ccaccgggcc tctccacctt
    13981 ctcgccggta gaatgggcct cgtccgcccg gcgcttcgac ctcccccagc cctgcgttgc
    14041 aagccgtccc cagtcaccac tgtggcggac agtcccgttt cccgcacccc gcgcccattt
    14101 acgtagccaa acttcgtagt tgaccttcgc agtttaccta cctatcttgc gttcatgcct
    14161 gccgccgccg caaaacccgc tgacgatgcc gaccgcaccc tggcgctggc cggcgacctg
    14221 cgcgtcgtca tcggccgact gagccgccgc ctccgcgacg aagcgcattt cggcgatttc
    14281 agtttttccg agatcaaggt cctgacgcgg ctcgaccgca acggaccggc caccgtcacc
    14341 gcccttgccg aagccgaggg cgtgcgcccg caatcgatga gcgctaccgt ttccgccctc
    14401 aaggccgccg gcctcgtcag cggcgcgtcc gatccggccg acggccgcca gaccgtcctc
    14461 agcctcaccg ctcactgccg ccagttgctc gagaccaccc gcgccgccaa gcgcgactgg
    14521 ctgttccgcg aaatccagtc gcgcttcacc ccggccgaac aggcccggct ggccgccgcc
    14581 gtcgccctcc tcgatcgcct catcgatccc tgaaccaaag atcccagccc atgcccgtca
    14641 ccaccctcga tcccaagacc gctctcgtcg tcctcgacct gcaggagggc atccgcaact
    14701 tcgccaaggg cgacggcccc gacgccgtgt tcaaggccgc cggctcgctc tgcgccgcct
    14761 tccgccacca ccacctgccg gtggtgctcg tcaacgtcga cgccgccgcc cccggccgca
    14821 ccgaatcgcc gcggcgcgtc ctcagcttcc cgcccgaagc gctgcagttc gtcccccagc
    14881 tcgaccagca agccaccgac atcgtcgtca ccaagaagac ctggggggcc ttcgcttcga
    14941 ccgacatcga gaaacggctg cgcgccctcg gcgtcaccca ggtcgtcctc gccggcatct
    15001 ccaccacgtc ggccgtcgaa tccaccgccc gccaggcctt cgaggccggc ttcaacgtca
    15061 ccgtcgcgct cgacgccatg ctggacatga acccgcaggc ccacgacaac gccgtcaaga
    15121 acaccttccc gcggctgggc gagaccggca gctcggccga catcatcgcc ctgctcgaca
    15181 ggaccgcgag cgcctgatga ccgacagcct cgcctcctcc gccgccatgc cggcgggcgc
    15241 gcccgcaacg gtctcgccgc gctacaaatg gctggcgctc tccaacacca ccgtcggcgt
    15301 gctgctcgcc accatcgaca cctcgatcat gctgatcgcc atgccgcaga tcttccgcgg
    15361 catcggcctc aacccgctcg aatccggaaa cacgttctac ctgctgtgga tgatcctcgg
    15421 ctaccagatc gtctcgagcg tgctggtggt cagtctcggc cgcctcggcg acatgttcgg
    15481 ccgcgtccgc atgtacagcc tcggcttcgc catctacacc atcgcctcgc tgatcctcac
    15541 cctcgatccg ttcatgggcc agcccggcgc gctcttcctc atcatcggcc ggctggtgca
    15601 gggcgtcggc gcggccttcc tcgtcgccaa ttccgccgcc atcctcaccg acgcctttcc
    15661 ggccaaccag cgcggcctcg ccctcggcat caacaacgtc gccggcatct ccggcaattt
    15721 catcggcctg gtgctcggcg gcctgctcgc cgccatcaac tggcggctgg tgttcctggt
    15781 gtcggtgccg ttcggcatct tcggcaccat ctggtcctac atgaagctgc gcgagctcgg
    15841 ccagcgccgc cgcgcccgca tcgactgggc cggcaacgtc accttcgcca tcggcctcgt
    15901 catggtcatg gtcggcatca cctacggcat cgagccggcg aatggccagc cgatgggctg
    15961 gaccagcgtt ccggtgctgt cgctgctgat cggcggcgcc atcttcctcg ccgccttcgg
    16021 catcatcgag acgcgcgtcg ccgaaccgat gttcaggctg ccgctgttca agatcaaggc
    16081 cttcaccttc ggcaccctgt cgacgtttct cagcgccgtc gggcgcggcg gcctgatgtt
    16141 catgctgatc atctggctgc agggcatctg gctgccgtcg cacggctaca gcttcgagca
    16201 gaccccgctg tgggccggca tcctcatgct gccgctcacc gccggcttcc tgctcgccgg
    16261 ccccgtctcg ggcttcctct ccgaccatct gggcgcccgc tggttcgcca ccggcggcat
    16321 gctcggcgcc gccgtcacct tcctgctgct gctgctgctg ccgatcgact tcaactactg
    16381 ggtgttcgcc ggcatcctcc tgctcaacgg cctcgccatg ggcgccttcg ccgcgcccaa
    16441 ccgcgccgcc atcatgacca gcctgcccgc cgccgaccgc ggcgccggcg gcggcatgaa
    16501 ctcgaccttc cagaactccg ccaacgtgct gtcgatcggc atcttcttca ccctgatgat
    16561 cgtcggcctc tccggcacgc tggccaccac catggtgcag ggcctcaccg cccacggcgt
    16621 gccgcaggcg atcgccgaaa gcgtcggccg cctgccgccg gtgtcgatcc tgttcgcggc
    16681 gttcctcggc tacaacccga tccagacgct ggtcggccag gacgtcctcg gccatctctc
    16741 gcagtccgat caggccgccc tcaccggctc gaccttcttc tccaacctca tcgccggccc
    16801 gttccactcc ggcctcgccg aggcgttcat cttcgccacg atcgcctgcc tcatcgccgc
    16861 cgcggcgtcc tggtcgcgcg gcggcaagcc cgccgcctga gggtttctcc ttcacggatt
    16921 tttgcgctgg cccggaaccg cccggggtgc ggaacattgc agcgtccgag ggaacggttg
    16981 aaccaaggac tccgccatgc actcatttcg ccccctgctc ttcgggctgg cgagcgccac
    17041 cgcggtcgcg ctccttccgc tcgggcccgt cgccgcgccg ctcggcatcg aggccagcta
    17101 cgcccagtct gcctccgtca gcatcgacgt cttcttcgac aagctcgccc ccagcggcgt
    17161 ctgggtgcag cacccgcagt accactacgt gttctgcccc aaggtcgacg ccaactggcg
    17221 gccctacacc aacggccact gggtgtacct gaagagctac ggctggtatt tcgcctccga
    17281 cgagcccttt gcctgggccg tctatcacta tggccgctgg ttcgaggacc agaagctcgg
    17341 ctggtgctgg gtgccgggca acgcctgggc cggcgcctgg gtcagctggc gccagggcaa
    17401 cgactatgtc ggctgggccc cgctcgaacc cgaccatgac ggttttgccg tcgatgtcga
    17461 cgtcaacaag gccgagcagc cgcagcgcga ctgggtcttc gtcaagccgg cgcgcttcct
    17521 ccagcccaac ctcaatgtcg agatcgtcgc cggcgaccgc cagcccgacg ccttccagaa
    17581 aaccaagttc gacggccccg tggtggtcaa gaacaacatc gtcatcaaca ccgtcatcga
    17641 catcaacttc atccagcagc agaccaagac caaggtggtc gtcgtcgatc ccaagccggt
    17701 cgacgatccc tccaaggccg gcaaggacgc cagcggcacc accatcgccg tgttctcgcc
    17761 gcagatcccg ccgcccaagc aggacgaaaa gccgaagcag tcggtgaacg aagaccaggc
    17821 ccagcagcag ctcggcacca agggtcccgg cgccagctcc agcgcggaat cctcgatgtc
    17881 gtcgagcgcc ccgtcgtcca gcgaggcgtc atcgtccatg tcctcgagcg cggcagcctc
    17941 gagcagtgcg gcgccgtcgt ccgcagcctc ctcgagcgaa gccgcgtcct ccagcgccgc
    18001 agccagcgag ccgccctcca gcgccatgag ctcgagcgag gcgccgtcct ccgccatggc
    18061 ctcgtcggcg atggaagcgt cgagctcgtc cgaagcgccg aagccggtct cttcgttgga
    18121 gcccaaggcc gttgcatcgt ccgagctgtc ctcctcgtcg gaggaacccc gggcatcttc
    18181 ctcggcggaa gccaagccgc agccgtcatc gtcggaagag cggcctgcgt cctcgagcga
    18241 ggagcgtcgc ccgtcgtccg agctcgtgtc ctcgtcgtcg gaggagcctc ccgctccggc
    18301 caaggcgcag gccagctccg aacagcccaa ggccgcgcca gcccaggaaa agcctaagcc
    18361 caagctcgtc tgccccgacg gccaggaaat cgtcgacggc aaatgcgtgc cgatcccggc
    18421 cagcagcaag tcgaaatgat gatccagcgg cgccgcctcc gggcggcgcc gttccccgct
    18481 acgaccgcac catcaccttg acgtcgcccg cccgcggctc ggcggccagc tcagtggcga
    18541 tgtccgcgat ccccaccacc cggctgatca gcggcatcag ctgcagcgtc ttcgccgcga
    18601 tcatcgccgc cgccctttgg tgggtctgcg ggttgagata ggccggcacc agccgcactt
    18661 cgcggaacag caggtcgaac ggctcgaccg ccaccgtcgt ccccttcgcc atcaccccga
    18721 acagcaccgc cgtcccgccg cgccgcaccg ccgcgagcga ctgcgtgaag gtttccggca
    18781 ccccggcgca ctccatcgcc acgtcgactc caaccggcac gatgtccgcc attgccgcga
    18841 cgacgtcgcc cccacccgga tcgaccacat gtgtcgcccc gagttgcagc gccagcg
//
LOCUS       DATAZA010000304         4708 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3166915, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000304 DATAZA010000000
VERSION     DATAZA010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4708
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3166915"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..537
                     /locus_tag="VHZ56_07720"
     CDS             <1..537
                     /locus_tag="VHZ56_07720"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4297896.1"
                     /translation="DAYPQLHAIFREPLFGVLPIETVWMVVLTGLTWLLLNRTRFGAH
                     VFLVGDNPTSARLMGINAVSVKTRAFVLVGVLAVFAGLMTSIYGYYFWPTTGDGYLLN
                     TIASVFLGGTSVFGGTGSIVGSFVASYIIGAINAGIVSAGINAFYTQLAFGLVIVISV
                     VLQTIIERRIRRQSLTGR"
     gene            complement(544..1494)
                     /locus_tag="VHZ56_07725"
     CDS             complement(544..1494)
                     /locus_tag="VHZ56_07725"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4297897.1"
                     /translation="MLLVLRRYGTLIGFALILAFFWARLPDTFMTARNWLNITEQLSM
                     LTVVAAGMTIVMVMGDFDLSVGSMASLSGIVAAILFSFGWSVPAAVGVALLAGLLGGA
                     VNGAMVSFLGILPFVATLATLTIFSGLAFVVSGGQTIFGRAIPAAFGDFARDGVALGP
                     VTLPNLTIVAIVVVAIVWVLLEQTTFGRRLYAIGGNIEAARLSGVAVRRLKLMAFALT
                     GLSAALAGLLYASRVASANPTQGSGLMLNAIAAVFLGMTMSEGGEPRVLATVVGVLIL
                     GVLDNGLTQMSVDSYVRQILVGLIIVLAVTASSISKSTRR"
     gene            complement(1497..3026)
                     /locus_tag="VHZ56_07730"
     CDS             complement(1497..3026)
                     /locus_tag="VHZ56_07730"
                     /EC_number="7.5.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HEX4297898.1"
                     /translation="MNAVPLLALENVSKAYAGVPALRDVSLSIAAGEIHALMGENGAG
                     KSTLIKILAGVVAPDHATIRIDDRPAAIDSPAAAHRLGLRFIHQELSIVPTMSVAENV
                     ILGRPYPRRAGVLVDWPRLNLLARDTLARLGITHIDPRLRMARLPLGDRMLVRISSAF
                     LSEPDAPARLYVMDEPTAALTREESQNLFRVLREIRGSGNSVLYVSHRLDEVMTLCDR
                     ATVLRDGRAVDSGRLGDITHDDLVAMMIGRRVEDAYPPARAKPAADAALSVDSLSSPG
                     LGPLSFGLRKGEILGVAGLSGAGQTRLLRTLFGDAAMTGGAIRLDGRPWRPRSPGASW
                     SGGIAYVPGERRTEGLVGSRPIFENITLPHLSAQSLAGAFLAPRRERRLAQRLGDTVR
                     LRAAGTGQRALELSGGNQQKVVFAKALGGTPKLLLLDEPTRGVDVGAKFDIYAVIRDM
                     TAAGMAVILVSSDLPELLGMSDRIAVMRDGAITMILEAEGLTEDVLLNHCYGRATAEA
                     A"
     gene            complement(3069..3998)
                     /locus_tag="VHZ56_07735"
     CDS             complement(3069..3998)
                     /locus_tag="VHZ56_07735"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX4297899.1"
                     /translation="MHTKTLRRVLFAATALATISIAGSAFAAKVAVITPYLAQPGTQF
                     YVQAFQDVAKQKGWDVNVIDTQGDVAGVISKIEDEVNQKVDAIVINVDPAQVQAGLQA
                     AKDASIPVFGMDAGSDPLLVTNVTSNGYAMAAETSTYVADRIGGKGNVVMFVFDAFPP
                     VQERGVVASAVFGNFPDIKILQKVTPDVADGGIADSRAKMEAILAANPTPGSISAVWC
                     AWDQPALGVLQAIEAAGRDKEGIIITGVDANPQARDEIAKGGDFEASVAQDFKGIGSA
                     TADAVARVLGGETLKQHVIYVPTQLITQANAKQ"
     gene            4093..>4708
                     /locus_tag="VHZ56_07740"
     CDS             4093..>4708
                     /locus_tag="VHZ56_07740"
                     /inference="COORDINATES: protein motif:HMM:NF012589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY family carbohydrate kinase"
                     /protein_id="HEX4297900.1"
                     /translation="MSTGTLIGIDIGTTAVKAVLVDFAGRLLASFARPHPTRRPEPGA
                     AEQDPADWMAGVSAALANFAAEHDLGGLAGIGMTSQVNTHVFVDAGGRPLLPAFVWQD
                     VRSARDAATLEARISAADKIAWFGAPVPVDASHALSRIAHVARLHPAILARTAHVLAP
                     KDYCILQLTGAIAADPVSAVGLVDAGGYVGPLLDLVPRAAELLPP"
BASE COUNT          712 a         1546 c         1696 g          754 t
ORIGIN      
        1 gacgcctatc cgcagttgca cgcgatcttt cgcgaaccgc tgttcggcgt gctgccgatc
       61 gagacggtgt ggatggtggt gctgaccggg ctgacgtggt tgctgctcaa ccgtacgcgg
      121 ttcggcgccc atgtgtttct cgtcggcgac aatccgacga gcgcgcggct gatgggcatc
      181 aacgcggtca gcgtcaagac ccgggctttc gtgctggttg gcgtgctggc ggtgttcgcc
      241 gggctgatga cctcgatcta cggctattat ttctggccga cgacgggtga cggctatctg
      301 ctcaacacca tcgcctcggt gttcctgggc ggtacctcgg tgttcggcgg taccggctcg
      361 atcgtgggct cgttcgtcgc ctcctacatc atcggggcga tcaacgccgg catcgtgtcg
      421 gccggcatca acgccttcta tacccagctc gccttcggtc tcgtgatcgt catctcggtg
      481 gtgctgcaga ccatcatcga gcgccgcatc cgccggcagt cgctgaccgg gcggtaaccc
      541 cggtcagcgc cgcgtgctct tggagatcga gctggcggtg acggcgagga cgatgatcag
      601 gccgacaaga atctggcgga cgtaggagtc gacgctcatc tgcgtcaggc cgttgtcgag
      661 gacgccgagg atcagtacgc cgacgaccgt ggcaagcacc cgcggctcgc cgccctcgct
      721 catggtcatg ccgaggaata ccgcggcgat ggcgttgagc atgaggcccg aaccctgggt
      781 cggattggcg gacgccacgc ggctggcata gagcaggccg gcgagcgcgg cgctgaggcc
      841 cgtcagcgcg aaggccatga gcttcagccg ccgcaccgcg acgccgctca gccgcgctgc
      901 ttcgatgttg ccgccgatgg cgtagagccg gcgcccgaac gtcgtctgtt cgagcagcac
      961 ccagacgatg gccacgacga cgatcgccac gatggtgaga ttgggcagcg tgaccgggcc
     1021 gagcgcgacg ccgtcgcgcg cgaaatcgcc gaacgcggca ggaatggcgc ggccgaagat
     1081 cgtctggccg ccgctgacga caaaggcgag gccggaaaag attgtcagcg tcgccagcgt
     1141 cgcgacaaac ggcaggatgc cgaggaagct caccatggcg ccgttgacgg cgccgcccag
     1201 caagcccgcc agcagcgcga cgccgaccgc cgcgggcacc gaccagccga agctgaacag
     1261 gattgccgcg acgatgcccg acaggctcgc catcgagccg acgctcaggt cgaagtcgcc
     1321 catcaccatg acgatggtca tgccggccgc gaccaccgtc agcatggaca attgctcggt
     1381 gatgttgagc cagttgcggg cggtcatgaa ggtgtcgggc agccgcgccc agaagaaggc
     1441 gaggatgagc gcgaagccga tcagcgtgcc gtagcggcgg agcaccagca gcatggtcag
     1501 gcggcctctg ccgtggcgcg gccgtagcaa tggttgagca gcacgtcctc ggtcagcccc
     1561 tctgcctcga ggatcatggt gatggcgccg tcgcgcatca cggcaatgcg gtcggacatg
     1621 ccgagcagct ccggcaaatc ggaggagacg aggatcaccg ccatgccggc ggcggtcatg
     1681 tcgcggataa cggcatagat gtcgaatttc gccccgacgt cgacaccgcg cgtcggctcg
     1741 tcgagcagca gcagcttcgg ggtgccgccc aacgccttgg cgaacaccac cttctgctgg
     1801 ttgccgccgc tgagctcgag cgcccgctgg ccggtgccgg cggcgcgcag gcgcacggta
     1861 tcgccgagcc gctgggcgag gcgacgctcg cgccgtggcg cgaggaaggc gccggcgagg
     1921 ctttgggcgc tgaggtgcgg cagggtgatg ttctcgaaga tcgggcgcga gccgaccagc
     1981 ccctcggtgc gccgctcgcc cgggacgtag gcgatgccgc cgctccacga ggcgccggga
     2041 ctgcgcggac gccacggcct gccgtcgagg cggatggcgc cgccggtcat cgccgcgtcg
     2101 ccgaagagcg tgcgcaggag ccgggtctgg ccggcgcccg aaagcccggc gacgccgagg
     2161 atctcgccct tgcgcaggcc gaacgacagc gggccgaggc cggggctcga caggctgtcg
     2221 acggacagcg cggcgtcggc cgcgggtttg gcgcgagcag gcggataggc gtcctccacc
     2281 cggcgcccga tcatcatcgc cacgaggtcg tcgtgcgtga tgtcgcccag ccggccgctg
     2341 tcgacggcgc ggccgtcgcg cagcaccgta gcgcggtcgc atagcgtcat cacttcatcc
     2401 agccggtgcg agacgtagag caccgaattg cccgaaccgc ggatttcgcg cagcacgcgg
     2461 aacaggttct gcgattcctc ccgcgtcagc gcagcggtcg gctcgtccat gacgtagagg
     2521 cgggccggcg cgtccggctc gctgaggaag gcgctcgaga tgcgcaccag catgcggtcg
     2581 ccaagcggca ggcgggccat cctcaggcgc ggatcgatgt gggtgatgcc gagccgggcc
     2641 agcgtgtcgc gcgccagcag gttcaggcgg ggccagtcga cgaggacgcc ggcgcggcgt
     2701 ggatacggcc gccccagaat gacattctcg gccaccgaca tggtcggcac gatgctcagt
     2761 tcctggtgga tgaagcgcag tccgagccga tgcgctgccg ccgggctgtc gatggccgcc
     2821 ggccggtcgt cgatgcggat ggttgcatgg tcgggggcga cgaccccggc caggatcttg
     2881 atcagcgtcg atttgccggc gccgttctcg cccatcaggg catggatttc acccgccgcg
     2941 atactgagcg agacatcgcg cagcgccggt acgccggcat aggccttgga gacattctcg
     3001 agcgcgagga gggggacggc gttcaacgga agatcatggc tttcgtttgg gtccgtcccc
     3061 gacaagcgtc actgcttggc gttggcctgc gtgatcagct gcgtcggcac gtagatcacg
     3121 tgctgcttca gcgtctcgcc gccgagcacg cgggccacgg cgtcggcggt cgccgacccg
     3181 atgcccttga aatcctgcgc cacggaggct tcgaagtcgc cgcccttggc gatctcgtcg
     3241 cgggcctgcg ggttggcgtc gacgccggtg atgatgatgc cttccttgtc gcggccggcc
     3301 gcctcgatgg cctgcagcac gccgagcgcc ggctggtccc aggcacacca cacggcgctg
     3361 atcgagccgg gcgtcgggtt ggcggcgagg atcgcctcca tcttggcgcg gctgtcggcg
     3421 atgccgccgt ccgccacgtc gggcgtgacc ttctgcagga tcttgatgtc ggggaagttg
     3481 ccgaacacgg cgctcgccac cacgccgcgc tcctgcaccg gcgggaaggc gtcgaacacg
     3541 aacatcacga cgttgccctt gccgccgatg cggtcggcca cgtaggtcga ggtctcggcc
     3601 gccatggcgt agccgttcga ggtcacgttg gtcaccagca gcggatcgga gccggcatcc
     3661 atgccgaaca ccgggatgct ggcgtccttg gcggcctgca ggccggcctg cacctgcgcc
     3721 ggatcgacgt tgatgacgat ggcgtcgacc ttctggttga cctcgtcctc gatcttgctg
     3781 atcacgccgg cgacgtcgcc ctgggtgtcg atgacgttga cgtcccagcc cttctgcttg
     3841 gcgacgtcct ggaaggcctg gacgtagaac tgggtacccg gctgggccag gtacggggtg
     3901 atcaccgcga ccttggcggc gaaagcgctg ccggcgatcg agatggtcgc gagcgcggtg
     3961 gccgcgaaca ggacgcggcg cagggttttg gtgtgcatga tggctcctgg tgcgcgcgag
     4021 gttgttttcc ttacgcttca gggcactata agggacgccg gaagccgggg ctacgggcaa
     4081 atcgggggag cggtgagcac cggaacgctg atcggcatcg acatcggcac gaccgcggtc
     4141 aaggcggtgc tggtcgattt cgccggccgg ctgctggcct ctttcgcgcg gccgcatccg
     4201 acgcggcggc cggaaccggg cgcggccgag caggaccctg ccgactggat ggcgggggtt
     4261 tcggcagcgc tcgcgaattt tgcggcggag cacgatctcg gtggccttgc cggcatcggc
     4321 atgacctcgc aggtcaacac gcacgtgttc gtcgacgccg gagggcggcc gctgctaccg
     4381 gcgttcgtct ggcaggatgt gcgcagcgca cgcgatgccg cgacgctcga ggcccgcatc
     4441 agcgcggcgg acaagatcgc atggttcggc gcgccggtgc cggtcgatgc cagccacgcg
     4501 ctgagccgga tcgctcacgt ggcgcggctt catcctgcaa ttcttgcgcg cacggcgcac
     4561 gtcctcgcgc ccaaggacta ttgcatcctg cagctcaccg gcgcgattgc cgccgatccg
     4621 gtttcggcgg tcgggctggt cgatgccggc ggttatgtgg ggccgctgct cgacctggtg
     4681 ccgcgggcgg cggagctgct gccgccgc
//
LOCUS       DATAZA010000305         4831 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3282817, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000305 DATAZA010000000
VERSION     DATAZA010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4831
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3282817"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            18..434
                     /gene="rbfA"
                     /locus_tag="VHZ56_07745"
     CDS             18..434
                     /gene="rbfA"
                     /locus_tag="VHZ56_07745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEX4297901.1"
                     /translation="MPQHHRPAGPTQRMLRVGELVRHALAGLFSRGEIEDPALEGKVI
                     TVPEVRMTPDLRLANAYVMPLGGVGAAEVVEALNRHQRFIRGRVAPELDLKFAPEFRF
                     FVDETFDTFGKIDALLRSDRVQRDLHPGDDEDKDSD"
     gene            490..1386
                     /gene="truB"
                     /locus_tag="VHZ56_07750"
     CDS             490..1386
                     /gene="truB"
                     /locus_tag="VHZ56_07750"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEX4297902.1"
                     /translation="MSEKKPKRHVSGWIVLDKPLGLGSTQAVGKIRWLYGADKAGHAG
                     TLDPLATGLLPIALGEATKTVPFVQAGAKRYRFALRWGAATSTDDAEGEIVARSDHRP
                     SEAETRAMLDRFVGTIQQRPPAFSAIKIAGERAYDLARAGETVELAPRPVTIGELRLL
                     SHGPDLSEFDLACEKGTYVRALARDLAEALGTRAHVVQLRRTAVGGFTEADAVTLEAV
                     ETAADRDRLLRTPGAVLGHLPELRLGPEDAALLRHGAAVLLRGAGAPIELAEAWASCN
                     GAAIAVGAVRAGHFHPARVLRA"
     gene            1523..3238
                     /locus_tag="VHZ56_07755"
     CDS             1523..3238
                     /locus_tag="VHZ56_07755"
                     /inference="COORDINATES: protein motif:HMM:NF019174.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HWE histidine kinase domain-containing protein"
                     /protein_id="HEX4297903.1"
                     /translation="MVSLSPSTPDTAVAAGSRPRSIALYLFVLALVALLPAFAFSAVL
                     LERNSEAQEAVVETLITGSTRSIIQAVDREVFANISTLKVLATTDTLQAGDLQGFYTQ
                     VKTALSGTDTYVYALNSNYYSLVSTRGPFDAPPVKSSDTASAARAFASRDVVVSGLVV
                     GSLSGAKVFNVLFPVFTGKLAPLVLGISRDAFTLQSALLSDKLPAGWNVAMVDTGGII
                     IAASNGAGITGDRFTLADVGSLQSTSGFITLASDANNYRAAVRKSDLTGWTLVAWAPA
                     SVIGKPLADAVWSLAVGGLLLAAIIVLIVYWVTLQIGRSVRGLEVDAKRLGTGQPVNA
                     RDYPISEIATVSAAIAEASSRRQQAETEVRFLMRELAHRSKNQMTVIAAMAKQTARGA
                     DSVPEFVQNFEKRIFGLARSTDLLLANGVVGVDLRELIASQIDPFCPVDESRVRLDGP
                     AVRLNIQAAQIVGMAAHELATNAVKYGAFQKDGGTLDVTWRHDAETLHIDWHERVEPF
                     TPPGDRRGFGTTVLENMVGRSLGAKVERLVHPDGLEWVFDIPASAVDPSRGPEEAGPV
                     AAANK"
     gene            3369..3638
                     /gene="rpsO"
                     /locus_tag="VHZ56_07760"
     CDS             3369..3638
                     /gene="rpsO"
                     /locus_tag="VHZ56_07760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEX4297904.1"
                     /translation="MSITAERKTALIKEYATKANDSGSPEVQVAILSERISNLTEHFK
                     LHSKDNHSRRGLLKMVATRRSLLDYVRKIDEGRYKTLIERLGIRR"
     gene            3981..>4831
                     /locus_tag="VHZ56_07765"
     CDS             3981..>4831
                     /locus_tag="VHZ56_07765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEX4297905.1"
                     /translation="MPINFDYHKVELNWGGQPLTLETGKMARQADGAVLATLGETVVL
                     ATVVSMKTPKAGIDFFPLTVNYQEKYFAAGKIPGGYFKREGRPTENETLVSRLIDRPI
                     RPLFPDGYRNETQVVVTVLQHDMENNPDVLAMVAASAALTISGIPFMGPIGAARVGYV
                     DGQYVLNLAVDKRADSKLDLVMAGTQDAVLMVESEAQELSEEIMLGAVMFGHAASRKV
                     IDAIIKLAELAAKEPRDFTAPDHSALEKDVLSFIETDLRAAYKITDKAKRYAAVDAAK
                     KKVKEAYA"
BASE COUNT          783 a         1786 c         1522 g          740 t
ORIGIN      
        1 acgcctaagt gcggccgatg ccccagcacc accgccccgc cggcccgacc cagcgcatgc
       61 tgcgcgtcgg cgaactggtg cgtcacgcgc tcgccgggct gttttcgcgc ggcgagatcg
      121 aggatccggc gctggaaggc aaggtcatca ccgtgcccga agtccgcatg acgccggacc
      181 tgcggctggc caatgcctat gtgatgccgc tcggcggcgt cggcgcggcc gaggtggtgg
      241 aggcgctgaa ccggcaccag cgcttcatcc gcggccgcgt ggcccccgag ctggacctca
      301 aattcgcccc ggaattccgg ttcttcgtcg acgagacgtt cgacaccttc ggcaagatcg
      361 acgccctgct gcgctccgac cgggtgcagc gcgacctgca tccgggcgac gacgaggaca
      421 aggactccga ctagtgcatt cgactgcagc aaaggccggc cggccgccct cgggcgagcg
      481 gtgcggtccg tgagcgagaa gaaaccgaaa cgccacgtct cgggctggat cgttctcgac
      541 aagccgctcg gcctcggctc gacccaggcc gtcggcaaga tccgctggct ctacggcgcc
      601 gacaaggccg gccatgcggg caccctcgat ccgctggcca ccgggctgtt gcccatcgcc
      661 ctcggcgagg cgaccaagac cgtgccgttc gtccaggcgg gagccaagcg ctaccgcttc
      721 gcgctccgct ggggcgccgc cacctcgacc gacgacgccg agggcgagat cgtcgcccgt
      781 tcggaccacc ggccctcgga ggccgagacc cgcgccatgc tcgaccgctt cgtcggcact
      841 atccagcagc ggccgccggc cttctcggcc atcaagatcg ccggcgagcg cgcctacgac
      901 ctcgcccgcg ccggcgagac cgtcgagctc gccccccgcc cggtgaccat cggcgagctg
      961 cgcctgctgt cgcacggtcc cgacctctcc gaattcgatc tcgcctgcga gaagggcacc
     1021 tatgtgcggg cgctcgcccg cgatctcgcc gaggcgctcg gcacccgcgc ccatgtcgtc
     1081 cagctccgcc gcaccgccgt cggcgggttc accgaagccg acgccgtcac cctcgaggcg
     1141 gtcgaaacgg cagccgaccg cgaccggctg ctacgcacgc cgggcgcggt gctcggccat
     1201 ctgcccgagc tgcggctggg cccggaagac gccgccctgc tgcgccatgg cgccgccgtg
     1261 ctgctgcgcg gcgccggggc gccgatcgag ctggccgagg cctgggccag ctgcaacggc
     1321 gcggcaattg ccgtaggcgc cgtgcgcgcc ggccatttcc accccgcccg ggtgctgcgg
     1381 gcgtaggcgg aaaaccgccg ccgcggggtg gaaccaaacc ccgccctggc gcatcttacc
     1441 ccctcggggg cactgcggcg gcaagagcgc tgccggaaaa gcgcgcggtc gctcgagctt
     1501 cgtcgcagga gtcgactgaa ctttggtttc gctgtcacca tccacccccg acactgccgt
     1561 cgcagccggc tcgcggccgc gctcgatcgc cctctacctc ttcgtcctgg cgctcgtcgc
     1621 cctgctgccg gcgttcgcct tctcggccgt gctgctcgag cgcaacagcg aggcgcagga
     1681 ggcggtggtc gaaaccctga tcaccggctc gacccgttcg atcatccagg ccgtcgaccg
     1741 cgaggtcttc gccaatatct cgaccctcaa ggtcctcgcc accaccgaca ccctccaggc
     1801 gggggacctc cagggcttct atacgcaggt caagaccgcc ctctcgggca ccgataccta
     1861 cgtctacgcg ctcaattcca actactattc tctggtcagc acccgcggtc cgttcgacgc
     1921 ccccccggtc aagagcagcg acaccgccag cgccgcccgg gcgttcgcca gccgcgacgt
     1981 ggtcgtctcc ggactggtgg tgggcagtct ctcgggcgcc aaggtcttca acgtcctctt
     2041 tccggtgttc accggcaagc tcgcgccgct tgtgctcggc atctcgcgcg acgccttcac
     2101 gctgcagtcg gcgctgctct ccgacaagct cccggccggc tggaacgtcg ccatggtcga
     2161 caccggcggc atcatcattg ccgcctccaa cggcgccggc atcaccggcg accgcttcac
     2221 cctcgccgat gtcggcagcc tgcagtccac ctcgggcttc atcacgctcg cctcggacgc
     2281 caacaattat cgcgccgcgg tgcgcaaatc cgacctcacc ggctggaccc tggtggcctg
     2341 ggcgccggcc agcgtcatcg gcaagccgct tgccgacgcg gtgtggtcgc tggcggtggg
     2401 cggcctgctg cttgccgcca tcatcgtcct catcgtctac tgggtgacgc tgcagatcgg
     2461 ccgctcggtg cggggcctcg aggtcgatgc caagcgcctc ggcaccggcc agccggtcaa
     2521 cgcccgcgac tacccgatct ccgagatcgc cacggtctcc gcggcgattg ccgaggcctc
     2581 gagccgccgc cagcaggccg agaccgaggt gcgtttcctg atgcgcgaac tggcgcaccg
     2641 cagcaagaac cagatgacgg tgatcgcggc gatggccaag cagaccgcgc gcggcgccga
     2701 ttccgtcccc gaattcgtgc agaatttcga aaagcgcatc ttcggccttg cccgctccac
     2761 cgacctcttg ctggccaacg gcgtcgtcgg cgtcgacctc agggagctga tcgccagcca
     2821 gatcgacccc ttctgccccg tcgacgagag ccgcgtgcgt ctcgacggcc ccgccgtccg
     2881 cctcaacatc caggcggcgc agatcgtcgg catggcggcg cacgaactgg ccaccaacgc
     2941 ggtcaagtac ggcgccttcc agaaggacgg cggcaccctc gacgtcacct ggcggcacga
     3001 cgccgagacc ctccacatcg actggcacga gcgggtcgag ccgttcacgc cgcccggcga
     3061 ccgccgcggt ttcggcacca ccgtgctcga aaacatggtc ggccgctcgc tcggcgccaa
     3121 ggtcgagcgc ctcgtccacc ccgacgggct ggagtgggtg ttcgacatcc cggcgtccgc
     3181 ggtcgatccc agccgcgggc ccgaggaggc cgggccggtg gccgcggcca acaaatgact
     3241 ggcattgccg ccacatttcc cctataggac cgccgaaatc cggtggctgc ggccccggat
     3301 gagtggcccg ccctggacga catcccgggg tcgggcgtcc ccaatcctcc atttgaaagg
     3361 atgatccgat gtcgatcacg gcagagcgca agactgcgct catcaaggaa tacgccacca
     3421 aggccaatga ttccggctcg cccgaggtgc aggtcgcgat cctttcggaa cgcatctcca
     3481 acctcaccga gcacttcaag ctccacagca aggacaatca ttcccgccgt gggctgctga
     3541 agatggtggc gacccgccgc agtctcctcg actacgtcag gaagatcgac gaggggcgct
     3601 acaagacgct gatcgagcgg ttgggtatcc gccgctagcg cggcaccgaa ttcgacctgg
     3661 ggggcacgat gctccccttg tcgcactggc atcgagcgaa ggcggatacc ggcttcgcga
     3721 cgatgtggac caaacgcgta ggctggtttg cctatgcgga gcatggcgag atcatcagcc
     3781 actcagggcg ccgcggtgcg caccgatact gagtggctca tcgtcttgtc catgttccgc
     3841 ccgaccagcg cggaaaccgt gccgattttg ggccggcgca gcacatgggg tgcggcgccg
     3901 tgctggcaca ccggatgagt tcgcggggtg gctacgcccc cgcgttcccg ctcagccggc
     3961 gaaatggaaa gacgtgcaac atgcctatca atttcgatta tcataaggtc gagctgaact
     4021 ggggcggcca gccgctcacc ctcgagaccg gcaagatggc ccgccaggcc gacggcgccg
     4081 tgctcgctac gctgggcgaa acagtcgtgc tcgccaccgt cgtctcgatg aagacgccga
     4141 aggccgggat cgatttcttc ccgctcaccg tcaactacca ggaaaagtac ttcgccgccg
     4201 gcaagatccc gggcggctat ttcaagcgcg aaggccgtcc gaccgagaac gagacgctgg
     4261 tctcgcgcct catcgaccgc ccgatccgcc cgctgtttcc cgatggctac cgcaacgaga
     4321 cgcaggtcgt cgtcaccgtt ctccagcatg acatggagaa caacccggac gtgctcgcca
     4381 tggtcgccgc ctccgccgcg ctgaccattt ccggcatccc cttcatgggc ccgatcggcg
     4441 ccgcccgcgt cggttacgtg gacggccagt acgtcctcaa cctggccgtc gacaagcgcg
     4501 ctgactcaaa gctcgatctc gtcatggccg gcacccagga cgccgttctg atggtcgagt
     4561 ccgaagccca ggagctgagc gaggagatca tgctcggcgc cgtgatgttc ggccacgccg
     4621 cgagccgcaa ggtcatcgac gcgatcatca agctcgccga gctggccgcc aaggaaccgc
     4681 gcgatttcac cgccccggat cactcggcgc tggaaaagga cgtgctgtcg ttcatcgaga
     4741 ccgatctgcg cgccgcctac aagatcaccg acaaggccaa gcgctacgcc gccgtcgacg
     4801 ccgccaagaa gaaggtcaag gaagcctatg c
//
LOCUS       DATAZA010000306         2070 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2120749, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000306 DATAZA010000000
VERSION     DATAZA010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2070
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2120749"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..583)
                     /locus_tag="VHZ56_07770"
     CDS             complement(<1..583)
                     /locus_tag="VHZ56_07770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HEX4297906.1"
                     /translation="MPEPFLNVTSSLTGRAWRDRLDEARTRTAQAIAQRSGLSEILAR
                     ILAGRGVGVDQAEEYLNPTIRALMPDPSSLADMDWLAARLVRAVTDNEHVALFGDYDV
                     DGASSCALMARYLRHFGLEPAIHIPDRIFEGYGPNIAAIDKLIDGGASLLVTLDCGTT
                     SDAPIAHARGRGIDVLVIDHHLSDHELPNATALV"
     gene            672..1649
                     /locus_tag="VHZ56_07775"
     CDS             672..1649
                     /locus_tag="VHZ56_07775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019996585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM44-like domain-containing protein"
                     /protein_id="HEX4297907.1"
                     /translation="MFGSRWFRLSALFAVLLTAFSLVAVGTAEARFGGSFGSRGFRTF
                     QSVPATPTLPSITSPVQRSMGGTTYSPGYGAGGYGWGGYGYRPSLFGGFGGGLLSGFL
                     FSGLFGMMFGGGWGGFGGFGGIFSLVIQLLLVGFVLRLLFRRFGWSNPLGAGYGGTGG
                     YGGGYGPGGPQPWAPGGGYSPQPQAKFSRGRDEIGVTNADLNVFEQRLSQLQDAYSRE
                     DYDAMRRISTPEMMSYLTEELAQSAAKGLRNEVFDVKLLSGDIAEAWREGDREFATAA
                     LRYESRDVMRERATGQLVSGEDRVVERAEVWTFVRQRGGEWLLSAIQGA"
     gene            complement(1696..>2070)
                     /locus_tag="VHZ56_07780"
     CDS             complement(1696..>2070)
                     /locus_tag="VHZ56_07780"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphatase class II"
                     /protein_id="HEX4297908.1"
                     /translation="IAGIIHAVNTEDTGIDIYIGSGGAPEGVLAAAALRCIGGQMQGR
                     LMLDTDEKRQRASRMGIADPNRKYSTSELASGDVLFAATGVTDGSLLSGVRYRAGSIR
                     TSTVVMRSWSQTVRWITAEHRR"
BASE COUNT          301 a          655 c          775 g          339 t
ORIGIN      
        1 tgaccagcgc ggtagcgttc ggcagctcgt ggtcggacaa atggtggtcg atcaccagca
       61 catcgatgcc gcggccacgg gcatgggcga tcggcgcgtc gctggtggtg ccgcaatcga
      121 gggtgacgag cagcgaggcg ccgccgtcga tgagcttgtc gatggccgcg atgttggggc
      181 cgtagccctc gaagatgcgg tcgggaatat ggatcgccgg ctcgaggccg aaatggcgca
      241 ggtagcgtgc catcagggcg caggacgagg cgccgtcgac gtcgtagtcg ccgaagaggg
      301 ccacgtgctc gttgtcggtg acggcccgga cgagccgcgc tgccagccag tccatgtcgg
      361 ccagggagga cgggtcgggc atcagcgccc ggatggtggg gttgaggtac tcctccgcct
      421 ggtccacgcc gacaccgcgt ccggcgagga ttcgggccag gatctcgctc aggccggagc
      481 gctgggcgat ggcctgcgcg gtgcgtgtcc gggcctcgtc cagccgatcg cgccaggcgc
      541 ggccggtgag cgaactggtc acgttgagga acggctcggg catgcgaaat cggacaccgg
      601 gggctggaaa ggtctaaaac tgcggaaatc ccccacccat atagggcgca tcgttcagga
      661 tggggaccac aatgttcggt tcgcgctggt ttcgactttc cgccctcttc gccgtgctgc
      721 tgacggcctt cagcctggtt gccgtgggca cggcggaggc gcggttcggc ggcagcttcg
      781 gtagtcgcgg cttccgcacc ttccagtcgg tgccggcgac gccgaccctt ccgtcaatca
      841 ccagtccggt gcagcgcagc atgggcggca cgacgtacag ccccggctac ggcgccggcg
      901 gctatggctg gggcggctac ggctatcggc cgagcctgtt cggcggcttc ggcggcggac
      961 tgttgagcgg cttcctgttc tcggggctgt tcgggatgat gttcggcggc ggctggggcg
     1021 gtttcggcgg cttcggcggc atcttcagcc tggtcatcca gctgctgctc gtcggcttcg
     1081 tgctgcggct gctgttccga cgcttcgggt ggagcaaccc gctcggcgcg ggctatggcg
     1141 gaaccggtgg atatggcggc ggctacggcc ccggcgggcc ccagccctgg gcgccgggcg
     1201 gcgggtatag cccgcagccg caggcgaagt tctcgcgtgg ccgcgacgaa atcggggtca
     1261 ccaacgccga cctcaacgtg ttcgagcaac ggctgagcca gctgcaggac gcctattcgc
     1321 gcgaggacta tgacgcgatg cgccggatca gcacgcccga aatgatgagc tatctgaccg
     1381 aagaactcgc ccagagcgcg gccaaagggc tccgcaacga ggtgttcgac gtcaagctgc
     1441 tgagcggtga catcgccgaa gcctggcgcg agggcgaccg cgagttcgct acggcggcgc
     1501 ttcgctacga gagccgcgac gtgatgcgcg agcgcgccac cggccagctg gtttcgggcg
     1561 aggaccgggt ggtcgagcgc gccgaggtct ggaccttcgt ccgccagcgc ggcggcgagt
     1621 ggctgctcag cgccatccag ggagcgtagt cgcaccctgc caagtggcga cgcgcgtcag
     1681 ccggccccga tctgcctacc gccgatgctc ggccgtaatc catctcacgg tctggctcca
     1741 tgagcgcatg acgacggtcg aggtgcggat cgagccggcg cggtagcgga cgccgctgag
     1801 gaggctgccg tcggtcacgc cggtggcggc gaacagcacg tcgcccgagg ccagctcgct
     1861 ggtcgaatat ttgcggttgg ggtcggcgat gcccatgcgg ctggcgcgct ggcgcttttc
     1921 gtcggtgtcg agcatcaggc gaccctgcat ctggccgccg atgcagcgga gcgcggcggc
     1981 ggccagcacg ccctccgggg cgccgccgga gccgatatag atgtcgatgc cggtgtcctc
     2041 ggtattgacc gcatggatga tgccggcgat
//
LOCUS       DATAZA010000307         9835 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3630013, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000307 DATAZA010000000
VERSION     DATAZA010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 9835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9835
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3630013"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1242
                     /locus_tag="VHZ56_07785"
     CDS             <1..1242
                     /locus_tag="VHZ56_07785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297909.1"
                     /translation="RHPQALFSDFQWFLFEARDAVYFTAFSQSRFDRDSLQNVVADMV
                     ALAPQLTHGFVGARPGQPFPKHLLDAITELREVDDFAGYPDAWLSHSADIFARDDLPL
                     FRVQALVRRGGPDAEGRASLIQVRSSHALLEGADSALLTRSQSAARGQTNTPTAIGWG
                     TRLLMTLQGQLLTWLYIGLANLLAPNEKPWGFKTLALKRHRLRLLANRLGVRQRSLYF
                     ALVTHALNGDGPTRHVSKKAIAAAYTLLDGRATGSDDGFLRVKALQARFKVLDDFVDY
                     VRAIDDTVARLERQDVSKFMALMGSAMKTLRSINGVWKGLPGKRFWRFGMGIEIALTL
                     VPPHRTYGPMTHGMVEPIYCGAWHPGQNICTFCPGREYITLNFSMEERHIANVDRILP
                     LLERVEAMAIVPRAFAAASDD"
     gene            complement(1264..2700)
                     /locus_tag="VHZ56_07790"
     CDS             complement(1264..2700)
                     /locus_tag="VHZ56_07790"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HEX4297910.1"
                     /translation="MTQLDTVPLAYDRRQVSPGIVHLGVGAFHRAHMAVYVDDLLRAD
                     PGWGIIGASLRRPDTKEALAPQHFLYTLAVRDASGTRNRVIGSILDILDASTQRAELI
                     GWLADPRIRIVSLTVTEKGYCHDPATGALDRSHPDIVHDLAHPDEPVSAPGLLVRAIE
                     LRRERGVAPFTVLSCDNLPANGRTTARIVSEFARLRSPELADHVAQHVAFPSSMVDRI
                     VPATTDADRQALRAETGWEDAWPVVTEPFSQWVIEDHFASGRPRFEDAGAQLVADVEP
                     FERMKLRMLNGSHSTMAYLGYLGGYQYVSEAVGDAAIRNLVGRLMSEEVMGTLPMDRA
                     MLEGYRDALLVRFANPALRHRTWQIAMDGSQKLPQRLLGTIRDRIAAGQPFERLGLGV
                     AAWMRYVTGVDEAGAPIEVKDPLAGRLRAIADGAGRDGGRLVDGLLAVGEVFGTDLPA
                     NAAFRDTLTRHVDALFARGALATAAAVG"
     gene            2850..4217
                     /locus_tag="VHZ56_07795"
     CDS             2850..4217
                     /locus_tag="VHZ56_07795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003574468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase/alpha-galactosidase"
                     /protein_id="HEX4297911.1"
                     /translation="MPTPKITFIGAGSSVFMKNIVGDILQRPALRDAEIRLMDINPVR
                     LEESEVIAGKLVRSLGTAATVRTYASQRQALEGADFVVVCFQIGGYEPSTVVDFEVPR
                     KYRLRQTIADTLGVGGIMRGLRTVRHLWSICEDMLAVCPEAIMLQYVNPMAINTWAIA
                     AKYPAIRQVGLCHSVQGTAMELAHDLDIPYAEIRYRSAGINHMAFYLEFEHRQPDGSY
                     RDLYPDLVRAYREGRAPKPGWNPRCPNKVRYEMLTRLGYFVTESSEHFAEYTPYFIKE
                     GRDDLIEKYGIPLDEYPKRCVEQIERWKATSEAYRSADRIEVKPSREYASEIVNSVWT
                     GEPSVIYGNVRNTGLITSLPEGCAVEVPCLVDASGLQPTHIGDLPPQLTALIRTNVNV
                     QELTVAALLSEDKQHIYHAAMLDPHTAAELDLDQIWSLVDDLLAAHGDWLPAWARSPA
                     RAAAE"
     gene            complement(4234..5583)
                     /locus_tag="VHZ56_07800"
     CDS             complement(4234..5583)
                     /locus_tag="VHZ56_07800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011583317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX4297912.1"
                     /translation="MNFHPPAPTPHTRPLNALEFVWTMARNPLAIWSEAAYREPVLVT
                     EWLGNPTIIVNDPAGIRHVMVDNARNYAMQPLRQRVLRPILRDGLLTAEGELWRRTRR
                     SIAPVFAPRNTQGLAIAMLERSRLFADGLATHAGTTLDIANQMTLLTFDILQATLFSG
                     DIAGEPQEFAAAVSGLLRTMGRIDPMDVLDAPGFVPRLTRVLGQRSLGYFRALITATI
                     ARREALLRQAPERAPRDLLTLLLEADGLSRSEVEDNIITFIGAGHETTARALGWTLYL
                     LSQSPDDRAAVEAELDAHDFSSGDPAAWGDRLVHTRAALEESMRLYPPAPSLNRAALA
                     EDRLGDIVIPKGASVLIMPWILHRHTRLWSRPGEFVPSRFLPDKRGAIDRYQYLPFGI
                     GPRVCIGQSFAMQEGVIALAMLLRRLRFDYAGKTAPQPVQKITVQPEHDIRMRVSAR"
     gene            complement(5626..6180)
                     /locus_tag="VHZ56_07805"
     CDS             complement(5626..6180)
                     /locus_tag="VHZ56_07805"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HEX4297913.1"
                     /translation="MSTSPSASARAAKPARPAQQGRTRVHLAVADPALAGRLAAELGR
                     RPELAAVPLEAAAVIVADGEHGDFGRTPMVSIGGDGPNALQTRDPALILSAAALVGAG
                     YLLSPAAPLAEPHAAPRVRLSQREQQVAALLVDGASNKLIARALEISVHTAKFHVTGV
                     LDKVGARNRADAVAIVLREGLIAL"
     gene            complement(6143..6985)
                     /locus_tag="VHZ56_07810"
     CDS             complement(6143..6985)
                     /locus_tag="VHZ56_07810"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HEX4297914.1"
                     /translation="MSLLSDLSAASAALAADIAPRIVAVRGASGFVWSTGLVVAAEEA
                     LEGEDEVEVRFNDGRSGRASLAGRDPSTDVALLKLETGTFGDWPAAPTPLPGSLALVA
                     GRGEESLIASLTSLTEAGPAWRSMRGGSIDARLSLGLRLGGRTEGAAVVAPDGGLIGM
                     AVTSARRRAIVIPASTVARAVATLGEKGYVPRGWLGVMLHPVGSGSGAIVLGIEDGSP
                     AARAGLLVGDVITTWDGEALASVGEISSRLAAGAVNSRVKLGVLRGGNAHDVDVTLGE
                     RPRG"
     gene            complement(7070..7729)
                     /locus_tag="VHZ56_07815"
     CDS             complement(7070..7729)
                     /locus_tag="VHZ56_07815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297915.1"
                     /translation="MRETRFSPVAGTSLYTLAVVLAAFELFVAWQAFHPNVSATYRSY
                     YIDETTTCLDQPVAGTYRFGTTVSFRSGNEPAIKPIRVCGWEGPAGDGLHSVGESSRL
                     RFALPAGADKLSLTVELVAVDFAKGGAQPVDIVVNGRTLARLDVHAGTPQSFTLDVPD
                     ALLQPGKPLDVELQYPEAIRVGADDPNTRKRSIKLTEARVNSSDPALLDLERQETKGL
                     A"
     gene            complement(7722..8903)
                     /locus_tag="VHZ56_07820"
     CDS             complement(7722..8903)
                     /locus_tag="VHZ56_07820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297916.1"
                     /translation="MAILETDAGPVVRSPAFGLPLSVAVALIPVAFAVVGLVVRYLAY
                     AAMAPDASLAGFPVGVCRWDCEWYVHIAERGYDAFPVPTMINAGNWAFFPLMPVFVGI
                     VHAVVPMIPTMTLATALSIAISYATALLAWPLFERDLRGYALFSAYLLAGPFSIYFTT
                     FMSEPMFILTGTGVLLALKRRQWLGAGVWSGLLSASRIVGVFMGLALLLQALLDHRAT
                     GKRASSFVPDLLRRPDIVLALVLAPLGAICYMAFLYWRMGDALAFLHVQRAWSRPSGN
                     PLAFLWQAVTSFPSGSWVPTAPQQSGAAVVAGLVLTALLAWRRQWAVALFCAICLVAP
                     LSAGMASTLRFTSALAPVVLLACSLLGRNRAVFALSLLGFLAANYFVTENWIGGALSL
                     A"
     gene            complement(8905..>9835)
                     /gene="opgC"
                     /locus_tag="VHZ56_07825"
     CDS             complement(8905..>9835)
                     /gene="opgC"
                     /locus_tag="VHZ56_07825"
                     /inference="COORDINATES: protein motif:HMM:NF021633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="OpgC domain-containing protein"
                     /protein_id="HEX4297917.1"
                     /translation="HIGTTAMALGIFAAAALWFGITSPLGQNNIDVLFTQPLGFMVGV
                     PLLTHQLGYFNILPLYLVLLLLTPLLLAIGTRHPWPTLLVSLTLWAAAGEWSLNLPNY
                     PTPGGWFFNPLSWQLIFVIGLLSGVAMRQGRALVPFDRVLFWGALAFVVFVGFWARID
                     WLAEWGRSLLGRLATAGFPGYFTWFDKTFLALPRLLHALALAYVASSLPIVRSFAESI
                     YAAPLTLLGRHGLPVFATSSVLDMVIQAIKSAIGEDALSDGLMFSAGIGLLLLLAGVL
                     DMLRGGRRRAVPATVAVASDAGAPAASDLAVSG"
BASE COUNT         1602 a         3538 c         3333 g         1362 t
ORIGIN      
        1 cggcatcccc aggccctgtt ctccgatttc cagtggttcc tgttcgaggc ccgcgacgcc
       61 gtctatttca ccgcgttctc gcagtcccgc ttcgaccgcg attcgctgca gaacgtcgtc
      121 gccgacatgg tggccctggc cccgcagctg acccacggct tcgtcggcgc ccgtcccggc
      181 cagccgttcc cgaagcacct gctcgatgcc atcaccgagc tgcgcgaggt cgacgacttc
      241 gccggctatc ccgacgcctg gctcagccac tccgccgata tcttcgcgcg cgacgacctg
      301 cccctgttcc gcgtccaggc cctggttcgc cgcggcggcc cggatgccga gggtcgcgcc
      361 tcactgatcc aggttcgctc gagccacgca ctgctcgaag gggccgattc ggcgctgctc
      421 acccgctcgc aatcggccgc ccgcggccag accaatacgc ccacggccat cggctggggc
      481 acgcggctgc tgatgacgct gcagggccag ttgctgacct ggctctatat cggcctcgcc
      541 aacctgctgg cgcccaacga gaagccctgg ggcttcaaga ccctcgcgct caagcgccac
      601 cgcctccggc tgctcgccaa ccggctgggg gtgcgccagc gctcgctgta tttcgcgctg
      661 gtgacccacg cgctcaatgg cgatggtccg acccggcacg tcagcaagaa ggcgatcgcg
      721 gctgcctaca ccctgctcga cgggcgggcg acgggctccg acgacggctt cctccgggtc
      781 aaggcgttgc aggcgcgctt caaggtgctg gacgatttcg tcgactatgt ccgcgccatc
      841 gacgacaccg tcgcccggct cgagcgccag gacgtgagca agttcatggc gctgatgggc
      901 tcggccatga agacgctgcg cagcatcaac ggcgtctgga aagggctgcc gggcaagcgc
      961 ttctggcgct tcggcatggg cattgaaatc gccctcacgc tggtgccgcc gcaccgcacc
     1021 tatggtccga tgacgcacgg catggtcgag ccgatctatt gcggcgcctg gcatccgggc
     1081 cagaacatct gcaccttctg ccccggccgc gaatacatca ccctcaattt ctcgatggag
     1141 gagcggcaca tcgccaatgt cgaccgcatc ctgccgctgc tcgagcgggt cgaggcgatg
     1201 gcgatcgtgc cgcgcgcctt tgccgccgcg tcggacgact aggcaggtcc gccggcgatc
     1261 ggctcagccc accgccgcgg cggtcgccag cgcgccgcgg gcgaacagcg cgtcgacatg
     1321 ccgggtgagc gtgtcgcgga acgccgcatt cgccggcaga tcggtgccga acacctcgcc
     1381 gaccgccagc aagccgtcca ccagccgccc gccgtcgcga ccggcgccgt cggcgatggc
     1441 gcgcagccgc ccggccagcg ggtccttgac ctcgatcggc gcgccggcct cgtcgacgcc
     1501 ggtgacgtag cgcatccagg ccgcgacccc cagccccagc cgctcgaacg gctggccggc
     1561 ggcgatgcgg tcgcggatcg tgccgagcag ccgttgcggc agcttctggc tgccgtccat
     1621 ggcgatctgc caggtgcgat gcctgagcgc cggattggcg aaacggacga ggagggcgtc
     1681 gcgatagccc tcgagcatcg cccggtccat cggcagcgtg cccatcactt cctccgacat
     1741 cagccgcccg acgagattgc ggatcgccgc atcgccgacc gcttcgctga catactggta
     1801 gccgccgaga tagccgagat acgccatcgt cgaatggctg ccgttgagca tccgcagctt
     1861 catccgctcg aacggctcga catccgccac cagttgcgcg ccggcgtcct cgaagcgcgg
     1921 ccggccggac gcgaaatggt cctcgatcac ccactggctg aacggctcgg tcaccaccgg
     1981 ccaggcgtct tcccagccgg tttcggcgcg cagcgcctgc cggtcggcgt cggtggtcgc
     2041 cggcacgata cggtccacca tgctcgaggg gaacgccacg tgctgcgcga catggtccgc
     2101 cagctccggg ctgcgcagcc gcgcgaactc gctgacgatc cgcgccgtcg tccgcccgtt
     2161 ggccggcagg ttgtcgcagc tgagcaccgt gaacggtgcg acaccgcgct cgcgcctcag
     2221 ctcgatggcc cgcaccagca gccccggcgc gctcaccggc tcgtccgggt gcgccaggtc
     2281 gtggacgatg tcgggatggc tgcggtcgag cgccccggtc gccggatcgt ggcaatagcc
     2341 tttctccgtc accgtcagcg aaacgatgcg gatgcgcggg tccgccagcc agccgatgag
     2401 ctcggcccgc tgcgtgctcg catcgaggat gtcgaggatc gagccgatca cccggttgcg
     2461 cgtccccgaa gcgtcccgca ccgccagcgt atagaggaaa tgctgcggcg ccagcgcctc
     2521 cttggtatcg ggccggcgca gcgacgcccc gatgatgccc cagcccggat cggcgcgcag
     2581 caggtcgtcg acatagaccg ccatgtgggc gcggtggaat gcccccaccc ccaggtgcac
     2641 gattccgggg ctgacctgcc ggcggtcgta ggcgagcgga acggtgtcga gctgcgtcat
     2701 cggagggccc ttgctgcgtc gggactggat cgtgcagggg tttgaccaaa ttccggccgc
     2761 cggcgctacg acgaacattg cactagccgg cgcccattcc tagaacaggc gagggcagcg
     2821 gcccgacccc gacgacggag agacttttca tgccgacccc gaagatcacg ttcattggcg
     2881 ccggctcctc ggtgttcatg aagaacatcg tcggcgacat cctgcagcgc ccggcgcttc
     2941 gggacgccga aatccggctc atggacatca atccggtgcg gctcgaggag agcgaggtga
     3001 tcgccggcaa gctggtgcgc agcctcggca ccgccgccac cgtccgcacc tatgccagcc
     3061 agcggcaggc gctcgagggc gccgatttcg tcgtcgtctg cttccagatc ggcggctacg
     3121 agccctcgac cgtggtcgat ttcgaggtgc cccggaaata ccggctccgc cagaccatcg
     3181 ccgacacgct cggcgtcggc ggcatcatgc gcgggctgcg gacggtgcgg cacctgtggt
     3241 cgatctgcga agacatgctg gcggtgtgtc ccgaggcgat catgctgcaa tacgtcaacc
     3301 cgatggccat caacacctgg gcgatcgcgg cgaaatatcc ggcgatccgg caggtcggcc
     3361 tttgccattc ggtgcagggc acggcgatgg agctcgccca cgacctcgac atcccctatg
     3421 ccgaaatccg ctaccgctcc gccggcatca accacatggc gttctacctc gagttcgagc
     3481 accgccagcc cgatggctcc taccgcgatc tctaccccga cctggtgcgg gcctatcgcg
     3541 aaggccgtgc ccccaagccc ggctggaacc cgcgctgccc caacaaggtc cgctacgaaa
     3601 tgctgacgcg gctcggctat ttcgtcaccg agagctccga gcattttgcc gagtacacgc
     3661 cgtacttcat caaggaaggc cgcgacgatc tgatcgagaa atacggcatc ccgctcgacg
     3721 aatatccgaa acgctgcgtc gagcagatcg agcgctggaa ggcgacgtcc gaggcgtatc
     3781 gcagcgccga ccgcatcgag gtcaagccat cgagggaata cgcctccgag atcgtcaatt
     3841 cggtgtggac cggcgagccg tcggtgatct acggcaacgt caggaacacc gggctgatca
     3901 cctcgctgcc cgagggctgt gccgtggaag tgccgtgcct cgtcgacgcc tcggggctgc
     3961 agccgaccca tatcggcgac ctgccgccac agctcaccgc gctgatccgc accaacgtca
     4021 acgtgcagga gctgaccgtc gcggcgctgc tgagcgagga caagcagcac atctaccacg
     4081 cggcgatgct cgatccgcac accgccgccg agctcgacct cgaccagatc tggagcctcg
     4141 tcgacgatct gctggcggcg cacggcgact ggctgcccgc ctgggcccgc agcccggcgc
     4201 gcgccgccgc cgagtgagca ggtcggccgc gcgctagcgc gccgacaccc gcatgcggat
     4261 gtcgtgctcg ggctgcacgg tgatcttctg caccggctgc ggggcggttt ttccggcata
     4321 gtcgaagcgc agccggcgca gcagcatcgc cagcgcgatg acgccctcct gcatggcgaa
     4381 cgattggccg atgcagacgc gcggcccgat gccgaacggc aggtactggt agcggtcgat
     4441 ggcgccgcgc ttgtcgggca ggaaccgcga cggcacgaac tcgcccggcc gcgaccacag
     4501 ccgcgtgtgc cgatgcagga tccacggcat gatcagcacc gaggcgccct tcgggatgac
     4561 gatgtcgccg agccggtcct cggcgagcgc cgcccggttg agcgagggcg ccggcggata
     4621 gagccgcatg ctctcctcga gcgcggcgcg cgtgtgcacc agccggtcgc cccacgccgc
     4681 cggatcgccg ctcgaaaaat cgtgcgcgtc gagctccgcc tcgaccgccg cccggtcgtc
     4741 cggcgactgg ctgagcagat agagcgtcca gccgagcgcc cgggcagtcg tctcgtggcc
     4801 ggcgccgatg aaggtgatga tgttgtcctc gacctccgag cggctgaggc cgtccgcttc
     4861 gagcagcagc gtcagcaggt cgcgcggcgc gcgttccggc gcctgccgca gcagcgcctc
     4921 gcgccgcgcg atggtggcgg tgatcagcgc ccggaaatag ccgagcgagc gctggccgag
     4981 cacccgcgtc agccgcggca cgaagccggg ggcgtcgagc acgtccatcg gatcgatccg
     5041 ccccatggtg cgcagcaggc ccgagaccgc ggcggcgaat tcctgcggct cgccggcgat
     5101 gtcgccggaa aacagcgtcg cctgcaggat gtcgaaggtc agcagcgtca tctggttggc
     5161 gatatcgagc gttgtgcccg catgtgtcgc cagaccgtcg gcgaacagcc gcgagcgttc
     5221 gagcatggcg atggccagcc cctgcgtgtt gcgcggcgcg aacaccgggg cgatcgaccg
     5281 ccgcgtccgc cgccagagtt cgccctcggc cgtcagcagc ccgtcgcgca ggatcggccg
     5341 cagcacccgc tggcgcagcg gctgcatggc gtagttcctg gcgttgtcca ccatcacgtg
     5401 ccggatgccg gccgggtcgt tgacgatgat ggtggggttg cccagccact cggtcaccag
     5461 caccggctcg cgataggccg cctccgacca gatggcgagc ggattgcgcg ccatggtcca
     5521 gacgaattcg agcgcgttga gcggccgcgt gtgcggggtc ggcgccggcg ggtggaagtt
     5581 cacggccaat tctccgggtt cggcgccatc ctagcgccga acgcctcaga gcgcgatcag
     5641 cccctcgcgc aggacgatcg ccaccgcatc ggcgcggttg cgggcgccga ccttgtcgag
     5701 gacgccggtg acgtggaact tggcagtgtg caccgaaatc tcgagcgccc gcgcgatgag
     5761 cttgttggag gcgccatcca ccagcagcgc cgccacctgc tgctcgcgct ggctgagccg
     5821 gacgcgcggc gcggcgtgcg gttccgccag cggcgcggcg ggactcagca ggtagccggc
     5881 cccgaccagt gccgcggccg agagaatcag cgccggatcg cgcgtctgca gcgcgttggg
     5941 gccatcgccg ccgatgctga ccatcggggt gcggccgaaa tcgccgtgct cgccatcggc
     6001 gacgatcacc gccgccgcct cgagcggtac ggccgccagc tccggccggc gccccagttc
     6061 cgcggcgagc cgtccggcca gcgccgggtc ggcgaccgcc aggtgcaccc gggtgcgccc
     6121 ctgctgtgcc gggcgcgccg gcttagccgc gcgggcgctc gccgagggtg acgtcgacat
     6181 cgtgagcatt tccaccgcgc agcactccca gtttgacgcg tgaattgacc gcgccggcgg
     6241 ccagccggct ggagatttcg ccgaccgacg ccagcgcctc gccatcccat gtggtgatca
     6301 cgtcgccgac cagcaacccg gctcgtgccg ccgggctgcc gtcctcgatg ccgaggacga
     6361 tggcgcccga accgctcccc accggatgca gcatgacgcc gagccaaccg cgcggcacgt
     6421 agcccttctc gccgagcgtt gccaccgccc gcgccacggt actggccgga atgacgatgg
     6481 cccggcgtcg cgccgaggtc accgccatgc cgatgagccc gccatccgga gcgaccaccg
     6541 cggcgccctc ggtccgccca ccgagcctca ggccgagcga caggcgcgcg tcgatgctgc
     6601 cgccgcgcat gctgcgccac gccggccctg cctcggtgag gctggtgagg ctcgcgatca
     6661 gcgactcctc gccgcgcccg gcgaccagcg ccagcgagcc cggcaaaggc gtcggcgccg
     6721 ccggccagtc gccgaacgtg ccggtctcga gcttcaagag ggcgacgtcg gtggagggat
     6781 cgcggccggc gaggctggcg cggccgctcc gcccgtcgtt gaaccgcacc tccacctcgt
     6841 cctcgccctc gagcgcttcc tcggcggcga cgaccagccc ggtgctccac acgaagccgc
     6901 tggcgccgcg aacggcgacg atgcgcggcg caatatccgc ggcgagcgcc gcactggcgg
     6961 cagacagatc ggagagcagc gacatggcaa atcctcggga cgacatctgc cgcaaaacgt
     7021 gcgcgctggg ctgtccccgc gaaagccgcc cagatgggca ggtgccgatc taggcgaggc
     7081 ctttggtttc ctgccgctcc agatcgagca gcgccggatc gctcgagttc acccgcgcct
     7141 cggtcagctt gatcgagcgc ttacgggtgt tgggatcgtc ggcgcccacc cggatcgctt
     7201 cggggtactg cagctcgacg tcgagcggct tgccgggctg cagcagcgca tcgggaacat
     7261 cgagggtgaa ggactgtggc gtgccggcat gcacgtcgag ccgcgccagc gtccggccgt
     7321 tgacgacgat gtcgaccggc tgcgccccgc ccttggcgaa gtccaccgcc accagctcga
     7381 cggtcagcga caatttgtcg gctccggccg gcagcgcgaa ccgcaggcgc gagctctcgc
     7441 cgaccgagtg cagtccgtcg ccggccggac cttcccagcc gcagacccgg atcggcttga
     7501 tggccggctc gttgcccgac cggaatgaca ccgtcgtgcc gaaccgatag gtgccggcga
     7561 ccggctggtc gaggcacgtg gtggtctcgt cgatgtagta gctgcgatag gtcgccgaca
     7621 cgttcggatg gaacgcctgc caggcgacaa acagctcgaa cgcagccagc accacggcaa
     7681 gcgtgtagag cgacgttccg gcgaccgggc tgaagcgcgt ctcacgcaag gctgagggct
     7741 cccccgatcc agttctcggt gacgaaatag ttcgccgcga ggaagccgag aaggctcagc
     7801 gcgaacaccg cccggttgcg gccgagcagg ctgcaggcga gcagcaccac cggcgccagc
     7861 gccgaggtga agcgcagcgt cgaggccatg ccggcgctga gcggcgcaac gaggcagatc
     7921 gcgcagaaca gcgccaccgc ccattgccgt cgccacgcga gcagcgcagt cagcaccagc
     7981 cccgccacca ccgcagcgcc cgattgctgc ggcgccgtgg gcacccagct gccggacggg
     8041 aagctggtca ccgcctgcca caggaacgcc agcggattgc cggacggccg cgaccaggcc
     8101 cgctgcacgt gcaggaacgc cagcgcgtcg cccatgcgcc agtagaggaa cgccatgtag
     8161 cagatggccc cgaggggggc gagcaccagc gccaggacga tgtcgggtcg ccgcagcagg
     8221 tcgggaacga agctcgatgc gcgcttgccc gttgcccggt ggtcgaggag cgcctgcagc
     8281 agcagcgcga ggcccatgaa taccccgacg atgcggcttg ccgacagcag gccggaccac
     8341 acgcccgcgc cgagccattg ccggcgcttg agggccagca gcacgccggt ccccgtcagg
     8401 atgaacatcg gctcgctcat gaaggtcgta aagtagatcg agaacggccc ggcgagcaga
     8461 taggcggaaa acagcgcata gccgcgcagg tcgcgctcga acagcggcca ggcgaggagc
     8521 gccgtggcgt acgagatcgc gatcgacagg gcggtcgcca gcgtcatcgt cgggatcatc
     8581 ggcacgaccg cgtgcacgat gcccacgaac accggcatca gcggaaagaa cgcccagttg
     8641 ccggcattga tcatcgtcgg gaccgggaag gcgtcgtagc cgcgctcggc gatgtggacg
     8701 taccactcgc agtcccaccg gcagacgccc accggaaatc ccgcgaggct cgcatcgggc
     8761 gccatcgcgg cgtaagcgag ataccgcacg acgaggccga cgacggcaaa ggcgacgggg
     8821 atcagcgcca ccgcgacgct cagcggcagg ccgaacgccg ggctgcggac aacggggccg
     8881 gcgtcggtct cgaggatcgc cattctagcc gctcacggcg aggtcggagg cggcaggcgc
     8941 tcccgcgtcg gaggccaccg cgaccgttgc cggtacggcg cgccggcgtc cgcctcgcag
     9001 catgtcgaga accccggcga gcagcagcag cagcccgatg ccggcggaaa acatcaggcc
     9061 atcgctcagc gcgtcctcgc cgatcgccga cttgatcgcc tggatcacca tgtcgagcac
     9121 cgagctcgtc gcgaacaccg gcagtccgtg ccggcccagc agcgtcagcg gggcggcata
     9181 gatgctctcg gcaaagctgc ggacgatcgg cagcgagctc gccacatagg cgagcgccag
     9241 ggcatgcagc agccgcggca gcgccaggaa ggtcttgtcg aaccaggtga agtagccggg
     9301 gaagcctgcc gtggcgagcc gcccgagcag gctccgcccc cactccgcca gccagtcgat
     9361 gcgggcccag aagccgacaa acaccacgaa cgccagtgcg ccccagaaca gcacccggtc
     9421 gaacggcacc agcgcccggc cctgccgcat ggcgacgccg gacagcaggc cgatgacgaa
     9481 gatcagttgc cacgacaggg gattgaagaa ccagccgccc ggcgtcggat aattgggcag
     9541 gttgaggctc cattcgcccg ccgccgccca cagcgtcagc gacaccagca gcgtcggcca
     9601 cggatggcgc gttccgatcg ccagcagcag cggcgtcagc agcagcagca cgaggtagag
     9661 cggcaggatg ttgaaatagc cgagctggtg ggtcagcagc ggcacgccga ccatgaaccc
     9721 cagcggctgc gtgaacagca cgtcgatgtt gttctgcccg agcggcgagg tgatgccgaa
     9781 ccacagcgcc gccgccgcga agatgccgag cgccatcgcc gtggtgccga tgtgg
//
LOCUS       DATAZA010000308         4390 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_496029, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000308 DATAZA010000000
VERSION     DATAZA010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4390
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_496029"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..807
                     /locus_tag="VHZ56_07830"
     CDS             <1..807
                     /locus_tag="VHZ56_07830"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEX4297918.1"
                     /translation="ASDDPVEIARAHTRFGYRSAYCPETDLADKDRIKAIVKAFADED
                     IMIAEVAIWRNVSAPEPDVRKTNLDFAIDRLALADEVGAKCAVTFIGTLAPNSLYGPH
                     PDNLNQIGFDVFVETARKVVDAVKPKRAKFAFEMMQWTLPDSPEVLLELIHAIDRPAF
                     AAHLDPTNLVVSPRLYYNTGDIIRRCFSVLGPHIVSAHAKDLVIGDQLSLHLSEVSPG
                     TGGLDYVTYLTELDKLGGRVPLLLEHLETEQYPAARDKVKSIGASLGIDI"
     gene            832..1656
                     /locus_tag="VHZ56_07835"
     CDS             832..1656
                     /locus_tag="VHZ56_07835"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX4297919.1"
                     /translation="MNDKAFEMLSRAVLGAILVVSIFPFYWMLINSLKDDMSIFNDPI
                     GLPAEALFVNYLTAWTQGDLGHALINSLIVTGSSVAIIVVTGALAAYPLARMRFVGRS
                     WFLALFTAGLIVAQEIVLIPLFDMFSHLGLLNTLWSVILTNSSFGLPLTIFLFWQFFR
                     ELPLELEEAARIDGCDSFSLLWRILLPLSRPVVGSVIILEGLFSWNEYLFALTFLRNQ
                     GGKTLPVQLQVFFSEHTTNWSLLFAALVTVTLPIILLYLAMQRSFVKGLTAGAVKG"
     gene            1660..2595
                     /locus_tag="VHZ56_07840"
     CDS             1660..2595
                     /locus_tag="VHZ56_07840"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX4297920.1"
                     /translation="MSNIDLAGPAASIAETTVKRRSPRSHYVLTPYLYMLPALIIFGA
                     FLVYPVIQSFFYSLQDWDGLNRGTYVGFANYVTLFNDPNFWNSLKVTLFWVAMSGGIL
                     PLTALGLALLVDFGVQSRTLSGIARTVLFIPMTISLVVVGLLFTLFYNPILGVINNVL
                     QRLGLMSMLDLLGDSNTVLMSIFFVAVWQWSGFGMVIFTAALQGISGELYDAAKIDGA
                     SKWQTIRHVVLPLLVPTYIVILTLNIIGGFKAFDLIYVMTAGGPANASQTTSIFLYQQ
                     AFILHKFGYGSTVSVVLFVLVGVVAMVLNRRRFAA"
     gene            2703..3971
                     /locus_tag="VHZ56_07845"
     CDS             2703..3971
                     /locus_tag="VHZ56_07845"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX4297921.1"
                     /translation="MPHKLKYLAGALGLSALLSGHAMAQQVELTFWDIAGNQGRDAEM
                     AAFEAANPDIKVNMVTFESEDYKTQLRLSVAGGTVPDLYVSNGGFTFFEYVDRGAAMD
                     ITDLVKQRGWDKRTEPEFLAADTDKNGHVFGMPWNPIDVQALFYDKEFFDKNNIPLPT
                     SIESMKDVAAKIKAAGRYPIAFGDKDGWPAIMMLADLMFQNTTPAEVEKLNTGENKWT
                     DFPAATKAFDALHTLATEGAFMPGFLSSNHETAIMTWVGRKAAMLYNGTWWPSVAKTN
                     NPFPVAVADFPEITPGAPLLGTQGLPGSQLLMSSHLDGAKKDAAIKLFDYVTSDAGMV
                     LYGNAEQVLTDDPVANKQITQIAAFYSQPALQRVAAAPKMQYLDHAFPIPVVEVLKVQ
                     LQKIMQDDGYTTAEALAAVEAAHAIERAKN"
     gene            4060..>4390
                     /locus_tag="VHZ56_07850"
     CDS             4060..>4390
                     /locus_tag="VHZ56_07850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4297922.1"
                     /translation="MVGYGFMARVHSHAWASVAHFFDTGYRPVLKGVTARNLGKVQQF
                     AGTWGYASAVSDWRELIARTDIDAIDICVPNDLHAEIAIAAAEAGKMVLCEKPLARTA
                     AEAMPMVE"
BASE COUNT          800 a         1455 c         1333 g          802 t
ORIGIN      
        1 gcctccgacg acccggtgga gatcgccagg gcgcacacgc gcttcggcta ccgctcggcc
       61 tactgtcccg agaccgatct ggcggacaag gaccggatca aggccatcgt caaggcgttc
      121 gccgacgaag acatcatgat cgccgaggtc gcaatatggc gcaacgtctc ggcccccgag
      181 ccggacgtcc gcaagaccaa cctcgacttc gcgatcgatc gtctcgcgct ggccgatgag
      241 gtgggggcaa aatgcgcggt taccttcatc ggcacgcttg cgcccaactc gctgtacggt
      301 ccgcatcccg acaacctcaa ccagatcggc ttcgatgtct tcgtcgagac cgcccgcaag
      361 gtcgtcgacg ctgtgaagcc gaaacgggcg aagttcgcct tcgagatgat gcaatggacg
      421 ctgccggata gcccggaagt cctgctcgag ctgatccacg ccatcgaccg gccggcattc
      481 gcggcgcacc tcgaccccac caatctcgtg gtctcgccgc ggctttacta caacaccggc
      541 gatatcatcc ggcgctgctt ctccgtgctg ggcccccata tcgtcagcgc ccacgccaag
      601 gatctggtga tcggcgacca gctgtcgctg cacctgagcg aggtgtcgcc cggcaccggc
      661 gggctcgact atgtcaccta cctgaccgag ctcgacaagc tgggcggccg cgtgccgctg
      721 ctgctcgaac atctcgagac ggagcagtac ccggcggcgc gggacaaagt gaagagcatt
      781 ggcgccagcc tgggtatcga catctgacgg gcaggcggac ggaggcggtc gatgaacgat
      841 aaggccttcg agatgctctc gcgagcggtg cttggcgcca tcctcgtggt cagtatcttt
      901 ccgttctact ggatgctgat caattcgttg aaagacgaca tgtcgatctt caacgatccg
      961 atcggcctgc ccgccgaggc gttgttcgtc aactacctga cggcgtggac gcaaggcgat
     1021 ctcggccacg ccctcatcaa cagcctgatc gtgactggca gttcggtcgc catcatcgtg
     1081 gtgaccgggg cgctggcggc ctacccgctg gcccgcatgc gctttgtcgg ccgctcctgg
     1141 ttcctggcgc tgttcaccgc cggtctgatc gtggcgcagg agatcgtgct gatcccgctg
     1201 ttcgacatgt tctcgcatct gggcctgctg aacacgctgt ggtcggtgat cctgaccaat
     1261 tccagtttcg gactgccgct gaccatcttc ctgttctggc aattcttccg ggagcttccg
     1321 ctcgaactcg aagaagcggc gcgcatcgac ggctgcgaca gcttcagcct gctctggcgc
     1381 attctcctgc cgctgtcccg accggtggtc ggcagcgtca tcatcctcga aggcctgttc
     1441 agctggaacg agtatctgtt cgcgctcacc ttcctccgca accagggtgg caagacgctg
     1501 ccggtccagc tccaggtgtt cttctcggag catacgacga actggtcgct gctgttcgcg
     1561 gcactggtga cggtgacgct gccgatcatc ctcctctacc tggcgatgca aaggtctttc
     1621 gtcaaaggcc tgacggccgg cgcggtgaag ggttagcgca tgtcgaacat cgatcttgca
     1681 ggaccggcgg ccagcatcgc ggagacgacc gtcaagcgcc gcagcccacg cagccactac
     1741 gtcctcacgc cctatctcta catgctgccg gcgctgatca tcttcggggc gttcctcgtg
     1801 tacccggtca tccagtcctt cttctactcg ctgcaggact gggacgggct aaatcgcggg
     1861 acctatgtcg gcttcgccaa ctacgtcacg ctgttcaacg atccaaactt ctggaattcg
     1921 ctgaaagtca ccctgttctg ggtggcgatg tcgggtggca tcctgccgct caccgcgctg
     1981 gggctggccc tgctcgtcga tttcggcgtc cagtcccgga cgctgagcgg catcgcccgc
     2041 accgtgctgt tcatcccgat gaccatatcg ctggtcgtcg tcggcctgct cttcacgctg
     2101 ttctataatc ccattctcgg ggtcatcaac aatgtgctgc agcgcctcgg tctgatgagc
     2161 atgctggatc tgctcggcga ctccaacacc gtgctgatgt cgatcttctt cgttgcggtc
     2221 tggcagtggt ccggtttcgg catggtgatc ttcaccgccg cgctgcaggg catatcgggt
     2281 gaactctacg acgcggcaaa gatcgatggc gccagcaagt ggcagaccat ccgccacgtc
     2341 gtcctgccgc tgctggtgcc gacctatatc gtcatcctga ccctcaacat catcggcggc
     2401 ttcaaggcgt tcgacctgat ctacgtgatg acagcgggcg ggccggccaa cgcgtcccag
     2461 accacatcca tcttcctcta ccagcaggcc ttcatcctgc acaaattcgg ctacggctcg
     2521 accgtgtcgg tggtgctgtt cgtgctggtg ggggtcgtcg ccatggtgct gaaccggcgg
     2581 cgcttcgccg cctagagagg ccacggactg cctgccgggg atgctggcgg gactgcaggg
     2641 gcggcggaac cgggaaggcc cggccagccg cacagatcaa gaattcacag ggagagaagt
     2701 ctatgccaca caaactcaaa tatctcgcag gcgccctcgg gctgtcggcg ctgctgagcg
     2761 gccacgccat ggcccaacag gtcgagctga cgttctggga cattgccggc aaccagggtc
     2821 gcgacgccga gatggcggcc ttcgaggcgg ccaatcccga catcaaggtc aacatggtga
     2881 ccttcgaatc cgaggactac aagacgcagc tgcgcctctc ggtcgccggc ggcaccgtgc
     2941 cggacctgta tgtcagcaat ggcggcttca ccttcttcga atatgtcgat cgcggcgcgg
     3001 cgatggacat caccgacctg gtcaagcagc gcggctggga caagcgcacc gagccggaat
     3061 tcctcgctgc cgataccgac aagaacggcc acgtcttcgg catgccgtgg aacccgatcg
     3121 acgtgcaggc gctcttctac gacaaggaat tcttcgacaa gaacaatatt ccgctgccga
     3181 cctcgatcga gagcatgaag gacgtcgccg caaagatcaa ggcggcggga cgctacccga
     3241 tcgccttcgg cgacaaggac ggctggccgg cgatcatgat gctggccgac ctgatgttcc
     3301 agaacaccac gccggccgag gtcgaaaagc tcaacaccgg cgagaacaaa tggaccgatt
     3361 tcccggccgc gaccaaggcc ttcgacgcac ttcacacgct ggcgaccgaa ggcgccttca
     3421 tgccgggctt cctcagcagc aaccatgaaa ccgcgatcat gacctgggtc ggccggaagg
     3481 ccgcgatgct ctacaacggc acctggtggc cgagcgtcgc caagaccaac aatccgttcc
     3541 cggtcgccgt cgccgacttc ccggaaatca cccccggcgc gccgctgctc ggcacgcagg
     3601 gcctgcccgg ctcgcaactg ctgatgagct cgcatctcga tggcgccaag aaggatgcgg
     3661 cgatcaagct gttcgactac gtgaccagcg acgcgggcat ggttctttac ggcaatgcgg
     3721 aacaggtgct caccgacgac ccggtcgcca acaagcagat cacgcagatc gccgccttct
     3781 acagccagcc ggccctgcag cgcgtcgccg ccgcacccaa gatgcagtat ctcgaccatg
     3841 ccttcccgat cccggtggtc gaggtgctga aggtccagct gcaaaagatc atgcaggacg
     3901 acggctacac cacggccgaa gccttggcgg cggtcgaagc cgcgcacgcc atcgagcgcg
     3961 ccaagaactg atcggatcga ggggggcgga gtcacgctcc gcccccttgc ctgcagcata
     4021 agccgggaga cgcaaataac caggcagctc aacatcggca tggtcggcta cggcttcatg
     4081 gcgcgggtgc attcgcatgc ctgggcgagc gtcgcgcatt tcttcgacac cggctaccgg
     4141 ccggtgctga aaggcgtgac ggcgcgcaat ctcggcaagg tgcagcagtt cgccgggacg
     4201 tggggctatg cgagcgccgt gtccgactgg cgcgaactga tcgcccgcac ggacatcgac
     4261 gcgatcgaca tctgcgtgcc caacgacctc cacgccgaga tcgccattgc ggcggccgag
     4321 gccggcaaga tggtgctgtg cgagaagccg ctggcccgca ccgcggccga ggccatgccg
     4381 atggtcgagg
//
LOCUS       DATAZA010000309         3167 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1888750, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000309 DATAZA010000000
VERSION     DATAZA010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3167
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1888750"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..368
                     /locus_tag="VHZ56_07855"
     CDS             <1..368
                     /locus_tag="VHZ56_07855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297923.1"
                     /translation="GRGSRLKPLPPAPPDFAGLAAALGQALAGLAAFEAAHTVWNVPL
                     KCLVWVTSGPPLPVRRLRPMTAQPALTPTEKRHAAATREAVRRHILHRYGAGYTAGYR
                     DAAAGLPPADSGDNPPLRD"
     gene            728..1183
                     /locus_tag="VHZ56_07860"
     CDS             728..1183
                     /locus_tag="VHZ56_07860"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX4297924.1"
                     /translation="MASLLTLTFSQPTRSLKAGEVLIAEGDPGGDIYVLESGELTVER
                     AGVRLASITAPGALVGEMSVLLGTENTATVRAAKPGSVRVVKDALAYLERQPLVALRV
                     AMLLSQRLDATSAVLVELSRAAGKSGKPAETGIFNRLMSALVAQPADKG"
     gene            1186..1659
                     /locus_tag="VHZ56_07865"
     CDS             1186..1659
                     /locus_tag="VHZ56_07865"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX4297925.1"
                     /translation="MASLLALTQSQPRRTVAAGEALTTAGDPGDGGLYVLESGRLTVE
                     REGVVIATISEPGALVGEMSVLLGIDHSATVRAAAASVVRVIDDAVAFLERSPLVALE
                     VATLACARLDATSALLVELRQQSAGKSGEHTMLGRILNALVEPPPRRRPVVRTHE"
     gene            1673..2650
                     /gene="gnd"
                     /locus_tag="VHZ56_07870"
     CDS             1673..2650
                     /gene="gnd"
                     /locus_tag="VHZ56_07870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating 6-phosphogluconate
                     dehydrogenase"
                     /protein_id="HEX4297926.1"
                     /translation="MQIGIIGLGRMGANIARRLLQGGHQPVVYDIDAAARTELGGEGA
                     TPAESLEAMVGALGAPRALWVMLPAGKITEGTVAHLASILSPGDIVIDGGNTYYKDDI
                     RRAAELQKAGIAYVDVGTSGGVWGLTRGYCMMIGGAPEVVAHLDPIFRTLAPGIGTIP
                     ATPHREGHDPRAEQGYIHAGPAGAGHFVKMVHNGIEYGIMQAYGEGFNILDGKNTDLL
                     PPGERFELKLADIAEVWRRGSVISSWLLDLGAEALAKDPALTTFSGYVEDSGEGRWTV
                     EAAIEESVPAEVLTAALYTRFRSRQTHNFAEKLLSAMRFGFGGHVEKKG"
     gene            complement(2654..>3167)
                     /locus_tag="VHZ56_07875"
     CDS             complement(2654..>3167)
                     /locus_tag="VHZ56_07875"
                     /inference="COORDINATES: protein motif:HMM:NF019403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="heparan-alpha-glucosaminide N-acetyltransferase
                     domain-containing protein"
                     /protein_id="HEX4297927.1"
                     /translation="VYSSDLFDPRWLSWIGFFVTTPDTADLVPVFPWFGVMLVGMLGM
                     RVLREAPAFGWSSGNRAVRLLALLGRWSLVFYLAHQLILVGIIAPLAGYLQNAEQAKL
                     TSFTQSCQQSCGTTGDVGYCTAYCRCALDLVVRGDLWAAVNASPRSAGQQADVNGMTK
                     LCTAMASDGQ"
BASE COUNT          458 a         1264 c         1009 g          436 t
ORIGIN      
        1 ccggccgcgg ctcgcgcctg aagccgctgc cgccggcgcc gcccgatttc gccggccttg
       61 ccgccgcgct cggccaggcg ctcgccgggc tcgccgcctt cgaggccgcc cacaccgtct
      121 ggaacgtccc gctcaaatgc ctcgtctggg tcacctccgg cccgccgctg ccggtgcggc
      181 gcctgcggcc gatgaccgcc cagccggcgc tcacgcccac cgaaaagcgc cacgccgcgg
      241 cgacccgcga ggccgtccgc cgccacatcc ttcaccgcta cggcgccggc tacaccgccg
      301 gctatcgcga tgccgccgcc ggcctgccgc ccgccgattc cggggataat ccgccgctgc
      361 gcgactgact tatccccgtc ggttgcgcct gcgctattct tcgccgcatc ggcccgcccg
      421 gtacgggcgt cgacgcggac ggcggcgggc cggcaggtcg gaggggaggg gatcgcgccc
      481 gtccccggtc ggcgcagcga cgcccggttg tgccgggcag actgcgccct ccgcaaatcc
      541 ggccgcctcg gggcgcgccg cgtctcgaca aacatcaacc tgaggcgcgc cgcgccccga
      601 ggccccgtat cccccgccac ccggcgcccc cagggccgcc ggccgcctcc gcacgcccgg
      661 gtgaggccct tgccctgccg ccgcccttcg ggctagctct gccggctgcc tcagcccgga
      721 gcccgccatg gccagcctcc tgacgctcac cttttcccag cccacccgca gcctcaaggc
      781 cggcgaggtg ctgatcgccg agggcgaccc gggcggcgac atctacgtgc tcgaatccgg
      841 cgagctcacc gtcgagcgcg ccggcgtccg cctcgcctcg atcaccgctc ccggcgccct
      901 ggtcggcgag atgagcgtgt tgctcggcac cgaaaacacc gccaccgtcc gcgccgcaaa
      961 gcccggttcc gtccgcgtcg tcaaggatgc gctcgcctat ctcgagcgcc agccgctcgt
     1021 cgcgctgcgc gtcgccatgc tgctcagcca gcggctcgac gccacctccg ccgtgctggt
     1081 cgagctcagc cgcgccgccg gcaagtcggg caagccggcc gagaccggca tcttcaaccg
     1141 gctgatgtcg gcgctcgtcg cccagcccgc cgacaagggc tgacgatggc cagcctgctc
     1201 gccctcaccc agtcgcagcc gcgccgcacc gttgccgccg gcgaggccct caccaccgcc
     1261 ggcgatcccg gcgatggcgg gctctacgtc ctcgagtccg gccgcctcac cgtcgagcgc
     1321 gagggtgtcg tcatcgccac catctccgag cccggcgccc tggtcggcga aatgagcgtg
     1381 ctgctcggca tcgaccactc ggccaccgtc cgcgccgccg ccgccagcgt cgtccgcgtc
     1441 atcgacgatg ccgtggcctt cctcgagcgc agcccgctcg tcgccctcga ggtcgcgacc
     1501 ctcgcctgcg cccgcctcga tgccaccagc gccctcctgg tcgagctgcg gcagcagagc
     1561 gccggcaaat ccggcgagca caccatgctc ggccgcatcc tcaatgccct ggtcgagccg
     1621 ccgccgcgcc ggcgtccggt cgtccgcacc cacgaataaa ggaccgcacg ccatgcagat
     1681 cggcatcatc gggctcggac gaatgggcgc caacatcgcc cggcggctgc tgcagggagg
     1741 ccaccagccg gtggtctacg acatcgacgc cgcggcccgc accgagctcg gcggcgaggg
     1801 cgccacgccc gccgaaagcc tcgaggcgat ggtcggcgcg ctgggcgcgc cccgcgccct
     1861 ctgggtcatg ctgccggccg gcaagatcac cgagggcacc gtcgcgcacc tcgcgtccat
     1921 cctgtcgccc ggcgacatcg tcatcgatgg cggcaacacc tactacaagg acgacatccg
     1981 ccgcgccgcc gagttgcaga aggccggcat cgcttatgtc gatgtcggca cctcgggcgg
     2041 cgtctggggc ctcacccgcg gctattgcat gatgatcggc ggcgcccccg aagtggtcgc
     2101 gcaccttgat ccgatcttcc gcacgctcgc ccccggcatc ggtaccattc cggccacgcc
     2161 gcatcgcgag ggacatgacc cgcgcgccga gcagggctac atccacgccg gccccgccgg
     2221 cgccggccat ttcgtcaaga tggtccacaa cggcatcgaa tacggcatca tgcaggccta
     2281 cggcgaaggc ttcaacatcc tcgacggcaa gaacaccgat ctgttgccgc ccggcgagcg
     2341 cttcgagctc aagcttgccg acatcgccga ggtctggcgg cgcggctcgg tgatctcgtc
     2401 ctggctgctg gatctgggcg ccgaggcgct ggccaaggat cccgccctca ccacgttttc
     2461 cggctatgtc gaggattcgg gcgagggccg ctggacggtc gaggcagcga tcgaggaatc
     2521 ggttcccgcc gaggtgctca ccgccgcgct ctacacccgc ttccgctcgc gccagaccca
     2581 caattttgcc gaaaagctgc tgagcgccat gcgcttcggc ttcggcggcc acgtcgaaaa
     2641 gaagggctga cgtctattgc ccgtcgctcg ccatggcggt gcagagcttc gtcatgccgt
     2701 tgacgtcggc ctgctggccg gccgaacgcg ggctggcatt gaccgccgcc catagatcgc
     2761 cgcgcaccac gagatcgagc gcgcaccggc aataggcggt gcaatagccc acgtcgccgg
     2821 tcgtcccgca actctgctgg caactctggg taaagctcgt gagcttcgcc tgctcggcgt
     2881 tctgcaggta ccccgcaagc ggcgcgatga tccccaccag gatcagctgg tgcgccagat
     2941 agaaaacgag gctccagcgg ccgagcaggg cgagcagccg caccgcccga ttgccgctcg
     3001 accagccgaa ggccggggcc tcgcgcagca cgcgcattcc cagcatgccg accagcatca
     3061 ccccgaacca cgggaacacc ggcaccaggt cggcggtgtc cggcgtcgtg acgaagaacc
     3121 cgatccagct cagccagcgc ggatcgaaca ggtccgagga atagacc
//
LOCUS       DATAZA010000310         5624 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_264917, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000310 DATAZA010000000
VERSION     DATAZA010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5624
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264917"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(73..1281)
                     /locus_tag="VHZ56_07880"
     CDS             complement(73..1281)
                     /locus_tag="VHZ56_07880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018425675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imelysin family protein"
                     /protein_id="HEX4297928.1"
                     /translation="MPAFADAPTADAVLANYADIAEAGYTDALTGARALDKAIDALIA
                     DPSPETLMVARDVWGAVRPAYQETEAYRFGNPIVDDWEPKVNAWPLDEGFIDYVDPGY
                     YGTESDDNPLYTANVIANKTITVADKTVDASTITPALLASLAEAGGSEANVTTGYHAI
                     EFLLWGEDTNRTGPGAGNRPATDYSLTACTHGNCDRRAQYLKSASTLLISDLTEMVGN
                     WAADGKARAALKGEGIGAILTGMGSLSYGELAGQRMKLGLLLHDPEEEHDCFSDLTYN
                     DLRADAIGIRNVYVGSYLRPDGTVVSGPSVSDLVAASDPALDKEIRGLLDTTLDRFGD
                     LKTRGDTIEKYDQMIGENNPDGNAVVQAVIDALVNQTHGIERAVAALKLDGVTIGGDD
                     SLDNPNTVFK"
     gene            1662..2771
                     /locus_tag="VHZ56_07885"
     CDS             1662..2771
                     /locus_tag="VHZ56_07885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018429385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4297929.1"
                     /translation="MHLKSALAASASIAVIVGMTASSYAATDLDALYKAAQGEGQLTV
                     IALPHDWCGYGAVIDSFKKKYPGITVNELNPDAGSGDEIQAIKANQGNTGPQAPDVID
                     VGLSFGPSSKDAKLIQPYKVSTWDSIPDSAKDPDGYWYGDYYGVLSFLVNDDLVKTAP
                     KTWADLQKSDYANQVALSGDPRVANQAIQAVYAAGLASGGTAGADAGTKGLAYFAQLN
                     KAGNFVPVIGKAAPLAQGTTPIVATWDYNALAWKDGFNGNPKAEVIVPSDGVVAGVYI
                     QAISAYAPHLNAAKLWEEYLYSDEGQIGWLAGYCHPIRFNDLASKKAVPADLLAKLPD
                     PALYAKAVFPSLDEQKAAADVITKQWDSVVGANVQ"
     gene            2761..3708
                     /locus_tag="VHZ56_07890"
     CDS             2761..3708
                     /locus_tag="VHZ56_07890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015916548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX4297930.1"
                     /translation="MSNNTDIIVANEAAPASAGVAVSTARGPLFASFAGTRWGDYIGV
                     APFLLFAILFLIVPTLFLVVGAFIGTDGHFTLQNILDLGTPQIVNSFWISIRVSAASA
                     VLGAAIGLAIALAIIRGRLPPAIRSTVMTFSGVASNFAGIPLAFAFLSTLGRLGLVTV
                     ILKLVFGFDMYRAGFNILSFWGLTITYLYFQIPLMILIIAPAIDGLKKEWNEAAETLG
                     ASRLQFWRYIGLPVLWPNLLGTLSLLFANAFGAIATAYALTGSSLNIVPILLYAEIRG
                     DVLNNPGLGAALALGMIVITAVANIVYLVIRTRAERWLK"
     gene            3705..4496
                     /locus_tag="VHZ56_07895"
     CDS             3705..4496
                     /locus_tag="VHZ56_07895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013529687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX4297931.1"
                     /translation="MRHRRFWSWVVFAIGAIYFLLPLVATIQFSLSIHRNTLSLDAYT
                     NVIQSPEFQQTFLFSLIVGVAAIVVGLVIVVPAAYFVRLRAPQLRPIIEFVTLLPLII
                     PPIILVFGYIRLYASSSILPLTTTAIGTNVLLTLAYVALALPYMYRAVDTGLRTIDVQ
                     TLTEAANILGANTATILARVIFPNILVAVLSGAFLTLAIVIGEFTIASLLNRPAFGVY
                     MQNVGANRAFEPAALAVISFVVTWGAMGMIQLLARFAPRTAARTD"
     gene            4500..5567
                     /locus_tag="VHZ56_07900"
     CDS             4500..5567
                     /locus_tag="VHZ56_07900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010660707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4297932.1"
                     /translation="MADQFLRIENLVKSFGGNTVVKGVNLSFSRGEFITLLGPSGCGK
                     TTILRMVAGFERPTSGTILVEGKDISPLPPNQRKIGMVFQAYALFPNMNVEDNVGFGL
                     KIAGMPTEQRRARVDEMLKLIGLSGYGSRFPFEMSGGQQQRVALARALAPKPRMLLLD
                     EPLSALDAKIRVSLRQEIRAIQRDLGITTIFVTHDQEEALSISDRIVVLSAGNVEQFG
                     TPFEVYNKPATRFVATFVGTLNTLHAKVTDPASKSVSIDGQVVTVPSLPASVAAGQDI
                     SLTLRPEAVSLANGHARDVVLDGTVSEVSFLGSVIRLKIELGQNAIHLDTFNDQHTPP
                     PAHNERVQVTLAGSDILVLGD"
BASE COUNT          917 a         2006 c         1684 g         1017 t
ORIGIN      
        1 ctggtcgtcc gccccggcga ttcccacgag cagcacgacg accagcaatg cggtcagcag
       61 acggtgcatc ggctacttga acaccgtatt gggattgtcg aggctgtcgt cgccgccgat
      121 ggtgacgcca tcgagcttca atgcggcgac ggcgcgctcg atgccgtgcg tctggttgac
      181 cagcgcatcg atcaccgctt gcaccacggc attgccgtcc ggattgttct cgccgatcat
      241 ctggtcgtac ttctcgatcg tgtcgccgcg ggtcttgaga tcgccgaagc ggtcgagcgt
      301 ggtgtcgagc agcccccgga tttccttgtc gagggctgga tcgctcgccg ccacgagatc
      361 ggagaccgac ggtcccgaca ccaccgtgcc gtcggggcgc aggtaggagc cgacatagac
      421 attgcgaatg ccgatcgcgt cggcccgcag gtcattgtag gtgagatcgg agaagcagtc
      481 gtgctcctct tccggatcgt gcagcagcag cccgagcttc atgcgctgcc cggcgagctc
      541 gccatagctg agcgacccca tcccggtgag gatcgcgccg atgccctcgc ccttgagcgc
      601 cgcacgggcc ttgccatccg cagcccagtt gccgaccatt tcggtgaggt cgctgatcag
      661 cagcgtgctc gccgacttga ggtactgcgc ccggcggtcg caattgccgt gggtgcaggc
      721 ggtgaggctg tagtcggtgg ccggacgatt gccggcaccc ggcccggtgc ggttggtgtc
      781 ctcgccccac agcaggaact cgatggcgtg gtagccggtg gtgacgttgg cctcgctgcc
      841 gcccgcctcc gccagtgacg ccaggagagc cggcgtgatg gtactggcgt ccacggtctt
      901 gtcggcaacg gtaatggtct tgttggcgat gacgttggcc gtgtagagcg ggttgtcgtc
      961 gctctccgtg ccgtagtagc cgggatcgac atagtcgatg aagccctcgt cgagcggcca
     1021 cgcattcacc ttcggctccc agtcgtcgac gatcgggttg ccgaagcgat acgcctcggt
     1081 ctcctggtag gctggccgga ccgcgcccca cacatcgcgc gccaccatca gcgtctccgg
     1141 cgagggatcg gcgatgagcg catcgatcgc cttgtcgagt gccctggccc ccgtcagcgc
     1201 gtcggtgtac ccggcctcgg cgatgtccgc atagttcgcc agcacagcgt cggcggtcgg
     1261 cgcatcggcg aacgccggca tagtcagagt cgtcaccccc agcagcagtg aaattcccag
     1321 tgccctcacg acggtctcct tggtccgaac ggcctcggcg gcaggggcta acaaagctga
     1381 ctacagcgat caagaaatat cgaccaagcc tggaaccgct ctaaactgcg ggggaatcga
     1441 ctccgtccgg caaaagaggc actgtcacaa ttgtcacaat cggataggag gcgaagggcg
     1501 gccgcttgca tgtgacgcgg gcgtcatcgg gaccgcacga gatcgttggg gatcggccgc
     1561 gactgtcacg cggctgtcat ttggccccaa tagttgaacc gcggctttcc gaccctcctc
     1621 ctcgagcaaa agaacagcct agttcccaag ggagactttt catgcatctc aaatccgcgc
     1681 ttgccgcttc ggcgtcgatc gccgtcatcg tcggcatgac cgccagcagc tatgcggcga
     1741 ccgacctcga cgccctgtac aaggccgccc agggcgaggg tcagctgacc gtcatcgccc
     1801 tgccgcacga ctggtgcggc tatggcgccg tgatcgacag cttcaagaag aaatatccgg
     1861 gcatcaccgt caacgagctc aatcccgacg ccggctcggg cgacgaaatc caggcgatca
     1921 aggccaacca gggcaacacc ggcccgcagg cgcccgacgt gatcgacgtc ggcctgagct
     1981 tcggaccgtc gtccaaggac gccaagctga tccagccgta caaggtctcg acctgggact
     2041 cgatcccgga ctcggccaag gacccggacg gctactggta cggtgactat tacggcgtgc
     2101 tctcgttcct cgtgaacgac gacctcgtca agaccgcgcc caagacctgg gccgacctgc
     2161 agaagtccga ctacgccaac caggtcgccc tctccggcga tccgcgcgtc gccaaccagg
     2221 cgatccaggc ggtctatgcc gctggcctcg cgagcggcgg caccgccggc gccgatgccg
     2281 gcaccaaggg cctcgcctac tttgcccagc tcaacaaggc cggcaatttc gtgccggtga
     2341 tcggcaaggc cgcgccgctg gcgcagggca cgacgccgat cgtcgccacc tgggactaca
     2401 atgcgctcgc ctggaaggac ggcttcaacg gcaatccgaa ggccgaggtc atcgtcccgt
     2461 ccgacggcgt cgtcgccggc gtctacatcc aggccatctc ggcctacgcc ccgcacctca
     2521 acgccgccaa gctctgggag gaatatctct attccgacga gggccagatc ggctggcttg
     2581 ccggctactg ccacccgatc cgcttcaacg acctcgccag caagaaggcc gttccggccg
     2641 accttctggc caagctgccc gacccggcgc tctacgccaa ggccgtgttc ccctcgctcg
     2701 atgagcagaa ggccgccgcc gacgtgatca ccaagcagtg ggactcggtc gtcggagcca
     2761 atgtccaata acaccgacat cattgtcgcc aatgaagctg ccccggcctc ggccggggta
     2821 gcagtttcta ctgcccgcgg tccgctgttt gccagttttg ccggcacccg ctggggcgac
     2881 tacatcggcg tcgcgccatt cctgctgttc gcgatcctgt tcctcatcgt gccgacgctg
     2941 ttcctcgtgg tcggcgcctt catcggcacc gacggccact tcacgctgca gaacatcctc
     3001 gacctcggca cgccgcagat cgtcaactcg ttctggattt cgatccgcgt ctcggccgcc
     3061 tcggcagtgc tgggcgcggc catcggcctc gccatcgcgc tcgccatcat ccgcggccgc
     3121 ctgccgcccg ccatccgctc caccgtgatg acgttctccg gcgtcgccag caatttcgcc
     3181 ggcatccccc tcgccttcgc cttcctgtcg acgctcggcc ggctgggact ggtgacggtc
     3241 atcctcaagc tggtgttcgg cttcgacatg tatcgggccg gcttcaacat cctgagcttc
     3301 tggggcctga cgatcaccta tctctacttc cagattccgc tgatgatcct gatcatcgcg
     3361 ccggccatcg acgggctgaa gaaggaatgg aacgaggcgg ccgagacgct gggcgcttcg
     3421 cgcctgcagt tctggcgcta tatcggcctg ccggtgctgt ggcccaacct cctcggcacc
     3481 ctgtcgctgc tgttcgccaa cgccttcggc gccatcgcca ccgcctacgc gctcaccggc
     3541 tcctcgctca acatcgtgcc gatcctgctc tacgccgaga tccgcggcga tgtgctcaac
     3601 aaccccggcc tcggcgcggc gctggcgctc ggcatgatcg tcatcaccgc cgtcgccaac
     3661 atcgtctacc tggtgatccg cacgcgggcg gagcgctggc tcaaatgagg caccgccggt
     3721 tctggtcctg ggtcgtcttc gccatcggcg cgatctattt tctgctgccg ctggtcgcca
     3781 ccatccagtt ctcgctgagc atccaccgca acaccctgag cctcgacgcc tacaccaacg
     3841 tcatccagtc gcccgaattc cagcagacct tcctgttctc gctgatcgtc ggcgtcgcgg
     3901 cgattgtcgt cgggctggtg atcgtcgtgc ccgccgccta tttcgtgcgc ctgcgtgccc
     3961 cgcagctccg acccatcatc gagttcgtga cgctgctgcc gctgatcatc ccgccgatca
     4021 ttctggtgtt cggctacatc cggctctacg cctcgtcttc catcctgccg ctgaccacta
     4081 ccgccatcgg caccaacgtc ctgctgacgc tcgcctatgt ggcgctggcg ctgccttaca
     4141 tgtaccgcgc cgtcgacacc ggcctgcgca ccatcgacgt gcagaccctc accgaggccg
     4201 ccaacatcct cggcgccaac accgcgacca tcctcgcccg ggtgatcttt cccaacatcc
     4261 tcgtcgccgt gctctccggt gccttcctga cgctggccat cgtcatcggc gaattcacca
     4321 tcgccagcct cctcaaccgg ccggcgttcg gcgtctacat gcagaatgtc ggcgccaatc
     4381 gcgccttcga gccggcggca ctcgccgtca tctccttcgt cgtcacctgg ggagcgatgg
     4441 gcatgatcca gctgctcgcc cgcttcgccc cccgcaccgc cgcccgaacg gactgatcca
     4501 tggccgacca atttctgcgc atcgaaaacc tggtcaagtc cttcggcggc aataccgtcg
     4561 tcaagggcgt caacctgagc ttcagccggg gcgagttcat caccctgctc ggcccctcag
     4621 gctgcggcaa gaccacgatc ctgcgcatgg tcgccgggtt cgagcggccg acctccggca
     4681 ccatcctcgt cgaaggcaag gacatctcgc cgctgccgcc gaaccagcgc aagatcggaa
     4741 tggtgttcca ggcgtatgcg ctgttcccga acatgaacgt cgaggacaat gtcgggttcg
     4801 gcctgaagat cgccggcatg ccgaccgagc agcgccgcgc ccgcgtcgac gagatgctca
     4861 agctcatcgg cctcagcggc tacggcagcc gctttccgtt cgagatgtcg ggcggccagc
     4921 agcagcgcgt ggcgctggcc cgcgccctgg caccgaagcc gcggatgctg ttgctcgacg
     4981 agccgctgtc ggcgctcgat gccaagatcc gcgtcagctt gcgccaggaa atccgcgcca
     5041 tccagcgcga cctcgggatc accaccatct tcgtgacgca cgaccaggag gaggcgctgt
     5101 cgatctccga ccgcatcgtc gtgctctcgg ccggcaatgt cgagcagttc ggcacgccgt
     5161 tcgaggtcta caacaagccc gcgacccgct tcgtcgcgac cttcgtcgga actctcaaca
     5221 cgctgcatgc caaggtgacc gatccagcca gcaaatcggt gtcgatcgac ggccaggtcg
     5281 tcaccgtgcc ctcgctcccc gccagcgtgg cggcgggcca ggacatctcg ctgacattgc
     5341 ggcccgaagc ggtgtcgctc gccaacggcc acgcccgcga cgtggtgctc gacggcaccg
     5401 tgtcggaggt gagctttctc ggctcggtga tccgcctgaa gatcgagctg gggcagaacg
     5461 ccatccatct cgacaccttc aacgaccagc acacgccgcc gccggcgcac aacgagcggg
     5521 tgcaggtgac gctggccggc agcgacatcc tggtgctcgg agactgagct gaattttctc
     5581 ttcatcaccg ccgaccaatg gcgcggcgag tgcctggggg cggc
//
LOCUS       DATAZA010000311         2117 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_264952, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000311 DATAZA010000000
VERSION     DATAZA010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2117
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264952"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..165
                     /locus_tag="VHZ56_07905"
     CDS             <1..165
                     /locus_tag="VHZ56_07905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HslU--HslV peptidase ATPase subunit"
                     /protein_id="HEX4297933.1"
                     /translation="IGARRLQTIMERLVEDISFNADEKTGQTIRIDAAYVAERVGRMA
                     SDADLSRFVL"
     gene            complement(222..443)
                     /locus_tag="VHZ56_07910"
     CDS             complement(222..443)
                     /locus_tag="VHZ56_07910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297934.1"
                     /translation="MTTDADATSLVARALDVQGAVSIDDTMATLPAWTSLSHVRLVLE
                     IEAALGREITADEIASIDSVRAVARLLGS"
     gene            complement(440..1033)
                     /locus_tag="VHZ56_07915"
     CDS             complement(440..1033)
                     /locus_tag="VHZ56_07915"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEX4297935.1"
                     /translation="MKITFAPRNRTLAAELETPRFVMKPLGVVGALRLTRDWRHDAEL
                     MASAGYVKAPRSLPMWIHKGPMPNSVDRFGFAIVVRDTGQPIGMHEVRLRDGRTASGM
                     IMLAERDWWGRDAAVEVRARLMNHFFRHAPVDRFLGYVRERNIRSIFIYRRLGYAFTG
                     LMQRPVRDPASGRMADLMRFEIERQQWLAGPFGGDDR"
     gene            complement(1030..1641)
                     /locus_tag="VHZ56_07920"
     CDS             complement(1030..1641)
                     /locus_tag="VHZ56_07920"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEX4297936.1"
                     /translation="MRISFGRPNKALARDLETENFRLRSLTLLEAMWLTDSWRGDFEL
                     LGSMHRLQRPFTRLEWARRGPIPNNVTRFAFDIIPKQTGRSIGVHGVHLRDYRSANTQ
                     IALSDRAWWGRDAVVEVRARLINHFFRHADISRFESSVEGRNMAGIFIYRRLGFAHVG
                     TLHRARRDPVSGRALDVLFFELLREDWERGPFAEAAPVREAGA"
     gene            complement(1638..>2117)
                     /locus_tag="VHZ56_07925"
     CDS             complement(1638..>2117)
                     /locus_tag="VHZ56_07925"
                     /inference="COORDINATES: protein motif:HMM:NF024591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase family protein"
                     /protein_id="HEX4297937.1"
                     /translation="AGSGRGEVLLRSPSMMLGYWRRPDLDADAFVDGWFRTGDTGELA
                     ADGGLTLVGRIKSEINRGGIKVQAEEVDMLLERHPGILEACAFGIPDPVAGEAVGAAL
                     VLRPGTPFEPEAIKAWCRQQARPDAVPSRLYAMAAIPRNDRGKIVRAEVRRLAEAGP"
BASE COUNT          334 a          716 c          761 g          306 t
ORIGIN      
        1 atcggggcgc ggcggctgca gacgatcatg gagcggctgg tcgaggacat ctcgttcaat
       61 gccgacgaga agaccggcca gaccatccgc atcgatgcgg cctatgtcgc cgagcgcgtc
      121 ggcaggatgg cgagcgacgc cgacctcagc cgcttcgtgc tctgagccga acgacgattc
      181 aatccagcgg gcggtgctgc acggcaccgc ccgctggcgt ttcagctccc cagcagccgc
      241 gccacggcgc gcaccgaatc gatcgaggcg atctcgtcgg cggtgatctc gcggccgagc
      301 gccgcctcga tctcgagcac cagcctcaca tgcgacaggc tggtccaggc cggcaacgtc
      361 gccatggtgt cgtcgatcga cacggcgccc tgcacgtcga gggcgcgggc gacgaggctg
      421 gtggcgtcgg cgtcggttgt catcggtcgt ctccgccaaa gggtcccgcc agccattgct
      481 gccgctcgat ctcgaagcgc atgaggtcgg ccatcctgcc gctggccgga tcgcgcactg
      541 ggcgctgcat caggccggtg aacgcgtagc cgaggcggcg atagatgaag atcgagcgga
      601 tgttgcgctc gcggacgtag ccgaggaagc ggtcgaccgg ggcatgccgg aagaaatggt
      661 tcatcagccg ggcccggact tccaccgcgg cgtcgcggcc ccaccagtcg cgctcggcga
      721 gcatgatcat gccggacgcg gtccgcccgt cgcgcagccg gacttcatgc atgccgatgg
      781 gctgtccggt gtccctgacg acgatagcga agccgaagcg atcgaccgag ttgggcatcg
      841 gccccttgtg gatccacatc ggcagcgagc gcggcgcctt cacgtagccg gccgaggcca
      901 tcagctcggc atcgtggcgc cagtcccggg tcagccgcag ggcaccaacg acccccagtg
      961 gcttcatcac gaagcgggga gtctcgagtt ctgcggccag cgtccggttg cgcggcgcga
     1021 aggtgatctt catgcgccgg cctcgcgcac cggggcggcc tcggcgaagg gcccgcgctc
     1081 ccagtcctcg cgcagcaatt cgaagaacag cacgtcgagc gcccgcccgg agaccgggtc
     1141 gcggcgggcg cggtgcagcg tgccgacatg ggcaaagccc agccgccggt aaatgaagat
     1201 gccggccatg ttgcggccct cgacgctcga ttcgaaccgg ctgatgtcgg cgtggcggaa
     1261 aaagtggttg atcagccggg cgcgaacctc gaccaccgca tcgcggcccc accaggcgcg
     1321 gtcgctgagg gcgatctggg tgttggccga gcggtagtcg cgcagatgca cgccgtggac
     1381 gccgatcgag cggcccgtct gcttggggat gatgtcgaag gcgaagcgcg tgacattgtt
     1441 ggggatggga ccgcgacggg cccattccag ccgggtgaac ggtcgttgca gccgatgcat
     1501 tgaaccgagc agctcgaaat cgccgcgcca gctgtcggtg agccacatgg cctcaagcag
     1561 cgtcagcgag cgcaggcgga aattctccgt ctcgagatcg cgcgccagcg ccttgttggg
     1621 gcggccgaag ctgatcctca tgggcccgcc tccgccagcc ggcgcacctc ggcgcggacg
     1681 atcttgccgc ggtcgttgcg cgggatcgcc gccatggcgt agagccgcga cggcacggcg
     1741 tcggggcggg cctgctggcg gcaccaggcc ttgatcgctt ccggctcgaa cggcgttcca
     1801 ggcctgagca cgagcgcagc cccgaccgcc tcgccggcca ccgggtcggg gatgccgaag
     1861 gcgcacgcct cgaggatgcc ggggtggcgc tcgagcagca tgtcgacctc ctcggcctgc
     1921 accttgatgc cgccgcggtt gatctcggac ttgatgcggc cgaccagcgt cagcccgcca
     1981 tcggcagcga gctcgccggt gtcgccggtg cggaaccagc catcgacgaa ggcgtcggcg
     2041 tcgaggtcgg ggcggcgcca gtagcccagc atcatcgagg gtgagcggag cagcacttcg
     2101 ccgcggccgg agccggc
//
LOCUS       DATAZA010000312        11553 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1194000, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000312 DATAZA010000000
VERSION     DATAZA010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 11553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11553
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1194000"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..431)
                     /locus_tag="VHZ56_07930"
     CDS             complement(<1..431)
                     /locus_tag="VHZ56_07930"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129703.1"
                     /note="acts in conjunction with GvcH to form
                     H-protein-S-aminomethyldihydrolipoyllysine from glycine;
                     forms a heterodimer with subunit 1 to form the P protein;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HEX4297938.1"
                     /translation="MSMNNQGRPTGTGTSGFASTSGSSLLPNEPLLFEIGDTGHSGVD
                     LPDADISDEFLGGFRRRTPLDLAGLTEPEALRHYVRLSRLNYSIDSGMYPLGSCTMKH
                     NPRLNEKMARLPGFADIHPLQPVSTVQGALELMNELAHWLMT"
     gene            complement(428..1771)
                     /gene="gcvPA"
                     /locus_tag="VHZ56_07935"
     CDS             complement(428..1771)
                     /gene="gcvPA"
                     /locus_tag="VHZ56_07935"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009758851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HEX4297939.1"
                     /translation="MRYLPHTAAERADMLAVIGAASAEALFAAVPPAARLARPLDLPA
                     HSPEFLVEAHMRALAARNHAAADGPFFVGAGAYRHHVPATVDHLIQRSEWLTAYTPYQ
                     PEVSQGTLQMLFEFQTQVAHLTGMEVANASMYDGSTATAEAVLMARRLTRKDKVILSG
                     GLHPHYRDVVSTYLDNSPSLIRLPASPEGQGDILNQIDDDTAAIVIQTPDFFGHLRNV
                     EKAAEAAHARGALLVVVVTEVVSLGLLEAPGALGADIVVCEGQSIGNALNFGGPYVGL
                     MATKKEFIRQMPGRLCGETVDADGNRGFVLTLSTREQHIRREKATSNICTNSGLCALA
                     FSIHMGLLGEAGLTRLARLNHARGVALARALRAVPGVELLNKSFFNEMTIRLPEPAAP
                     VVDLLAQADVLAGVPVSRLIPDDPTVENLIVLAATELTTDGDIDMLAACLEEALQ"
     gene            complement(1774..2139)
                     /gene="gcvH"
                     /locus_tag="VHZ56_07940"
     CDS             complement(1774..2139)
                     /gene="gcvH"
                     /locus_tag="VHZ56_07940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEX4297940.1"
                     /translation="MTIKFTQDHEYIRLEGATAIVGITAYAQDQLGDIVFVELPSVGK
                     KLRKGDEAAVVESVKAASEIYAPASGTVTSVNTALTSEPGLINTAPDTDGWIFKLQLD
                     NAAELDGLMDDAAYKQHTA"
     gene            complement(2136..3305)
                     /gene="gcvT"
                     /locus_tag="VHZ56_07945"
     CDS             complement(2136..3305)
                     /gene="gcvT"
                     /locus_tag="VHZ56_07945"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HEX4297941.1"
                     /translation="MPEPQAEPLKTVVLNDEHIKLGGRMVPFSGYSLPVQYPVGIIAE
                     HKWTREHAGLFDVSHMGPSLLMLDDKSGDPERDHATIAALVEPLVTADIRGLKPGQMR
                     YTLLLNDAGGTLDDLMVERPDDPAWAGTLYIIVNAGTKAADWARIEAATAGRATLHRA
                     DTGGLLALQGPEAAAVAEQLIPGVAGLGFMTCRSFDWAGTSLIISRSGYTGEDGFEIL
                     VDAEFAPQLWNALLADPRVRPIGLGARDSLRLEAGLPLYGHDLDETVSPSEAGLNFAV
                     SKRRREARDFPGADRVLREFAGDLARLRVGLFVDGAPAREGAEILDVAGQSIGRITSG
                     GFSPSLNRAIALGFVPPASSAPGTKLQVAVRGRLQPAEIAALPFVPHRYVRKATA"
     regulatory      complement(3356..3457)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     regulatory      complement(3519..3615)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            complement(3660..4193)
                     /locus_tag="VHZ56_07950"
     CDS             complement(3660..4193)
                     /locus_tag="VHZ56_07950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297942.1"
                     /translation="MGGLFGGGGTPSAATTQLQNATASPAEIAADSPALPAIATQCPP
                     IKVRPGAEALYYYGNGKVGNANDLQYQAVIDKQSRNCVVSNGLITVKMGVVGRLMLGP
                     SGNQSSVDLPLRFAVERADSTALFSEKYDIPVAITPPAQSNDFVKVVENVQIPYVNGD
                     DITIWVGFDSGPAPKQG"
     gene            complement(4289..4780)
                     /locus_tag="VHZ56_07955"
     CDS             complement(4289..4780)
                     /locus_tag="VHZ56_07955"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX4297943.1"
                     /translation="MIQTGDRLPTIPVKLVDAGGVSDSDTAAILGSGTVVLFAVPGAF
                     TPTCDTSHLPGFVAAAGKLRASGVDRIVCAAANDHHVVKAWAERSEALGVVDFIADPR
                     AEFAEALGLAKNFPDLGKRYARFAMIVRAGVVDKLFVQDVSGVTVSGAPAILLALQGE
                     TVQ"
     gene            complement(4815..5621)
                     /locus_tag="VHZ56_07960"
     CDS             complement(4815..5621)
                     /locus_tag="VHZ56_07960"
                     /inference="COORDINATES: protein motif:HMM:NF022853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
                     /protein_id="HEX4297944.1"
                     /translation="MVRFVLLLCLTLAASPALAGATPWQQLAPGVQARLISSDALSDG
                     TTLAGLELDMPAGSKTYWRIPGETGIPTQIDFSASSGLGDPQLLWPFPEIDHTGGFLD
                     YVYHGTLVLPVRLSAGGATATLSASIALGICSDICVPAQAQFELPVDFGKPDAAQAIR
                     LDQAVARTPIAWDQPAEPFGAVNLSTDGAGLAIAGADPSLDLTSLIADVGDPSILFET
                     PQKSPDGNLWTLRPLGGAGAKGLEGRSVQLTFMTPMGPYAVTRKIEPAAQ"
     gene            5736..6314
                     /locus_tag="VHZ56_07965"
     CDS             5736..6314
                     /locus_tag="VHZ56_07965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HEX4297945.1"
                     /translation="MISFKGQFLVAMPGMGDERFRDTVIYVVGHGDEGAMGLVVNQSV
                     DDMHFADILEELGLGEKDQIIRLPSTVRDREVLRGGPVQRGRGFVLHSPDYFREGNSY
                     AVNDDICLTATLDILKSMAFRNAPADAVFALGYCGWAPGQLENEIALNGWLTVPFLRE
                     LLFGTPLSERYDMALSQLGITRASLSGAAGHA"
     gene            complement(6318..9215)
                     /locus_tag="VHZ56_07970"
     CDS             complement(6318..9215)
                     /locus_tag="VHZ56_07970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX4297946.1"
                     /translation="MRHFLALAVVLAVALAGATPVAAFDVVTAPEDVNAVNLISAVDI
                     AQGTNGKIQLSTAPGEDGIIRRVEVLASQNGANPTWALFAIKNDSDAQMDRLLVAPFF
                     RLPGSAVQPGAGFFRPDLGSERVSALTPSAGIRPVRVADREADVFQVTLDPGATVTFV
                     AELSGSTLPELYLWKPDAYRDYINSFTLFRGVVLGVASLAAVFLTIMFVVRGRGIFPA
                     TAAFSWAVLVYLLVDFGVFGPLIGISNGNTAPFRAAAEAGIATTLFAFLFIYLNLHRW
                     HLRFITLALALTVVFLALFGFAFLQPSVAATIARLVLALLALTGFFLILLLALRGYDR
                     AVLLVPTWIIYIAWIFYGWLVITGQVSNDVAQSAVAGGLVLIVMLLGFTSVQHAFSEG
                     QVSIGTLSEVERRALALTGSGDFVFDWNIERDRVAVSDELSVRLGERRGALRGAIKRW
                     LDRIHPDDRDRFRTAFDTLVELRRGKVSTDIRLAAHDGSSRTFRMRVKPVLGGDGQVN
                     RIVGTLQDVNEDRASRDRLLHDAVHDSLTGLPNKQLFIDRLERALSRAKLPNGIKPAV
                     FLLDIDRFMELEERVGHSAADSVLLAISRRVARIMRPLDTVARLQGDQFAVILASEAA
                     AGKIAETAEQIRKALKSPFNFGERDLSLTASIGVTIYDGNPATAEDVLRDAELAMYYA
                     KRLGGDRIEAYRASARSIAAYTRASEEDLDRGLRHGELEVQFQPIMDIHSGEIAGAEA
                     LMRWNHPQRGIVPPEEFVPLAERTGMIERLGRLAFEQAVGQTREWMRTLPIPEDFFVS
                     VNLSPTQLQTESLLTDMRALVAENRAIAGHLKLEITEGQVMANPEHSAYMLQALKALG
                     LGLALDDFGTGHSSLSYLHRFPVDTLKIPAPFVQIADDSGLAHTQGPIIRSIVALALE
                     LDLTVIAEGVETLEEIERLQQLNCQFAQGFAFGAAMSGADFGKKLSAQLGR"
     gene            complement(9291..9902)
                     /locus_tag="VHZ56_07975"
     CDS             complement(9291..9902)
                     /locus_tag="VHZ56_07975"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEX4297947.1"
                     /translation="MVMLGWFARDPTPVLTGPRIVLRAPRGRDFEAWRALRRRSREFL
                     KPYEPRWTDADLNSQAFGVRLGRGRREALRGTDYSFLIFETAAGGETLVGGLTLSNIR
                     RRAAQHGNLGYWMGQEYAGRGLMSEAVGLTLPFFFETLGLHRLHAAFLPHNVASRRVL
                     EKNGFREEGFAETYLQIDGKWADHVLFALTRERWDARHKTAGR"
     gene            complement(9906..11168)
                     /locus_tag="VHZ56_07980"
     CDS             complement(9906..11168)
                     /locus_tag="VHZ56_07980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEX4297948.1"
                     /translation="MSVRTTTLSNGMTVITDDMPHLESASLGIWVKAGSRSETAVEHG
                     ISHVLEHMAFKGTKSRNALQIAEAIENVGGDLNAATSVEHTGYFARVLKEDVPLAGDI
                     LADILQNSLFEQSELDREQQVIVQEIGAARDNPDDHVFDLFQQAAYPDQPIGRTILGT
                     VESVKSFSPATIRDYMERNYVGDQMVVCAAGNVDHEALVEISDKRFSGLRADGAPAPE
                     KAHYVGGEQRLLSDHEQAHIVLGFEGRAYNSDGFYAAQILASILGGGMSSRLFQEVRE
                     KRGLCYSVYAFHWAFADSGIFGVAASTGEAEVTDLVPVVLDELRKATETITDEEVMRV
                     RNQIRAGLLMSLESPSSRAGQLARQQILWGRPIPLQETVDRINRITADRVKQIARQVF
                     DNGRMSLAGIGPVAKLPDYEAIASRLKN"
     gene            complement(11170..>11553)
                     /locus_tag="VHZ56_07985"
     CDS             complement(11170..>11553)
                     /locus_tag="VHZ56_07985"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="catalyzes the formation of L-threonine from
                     O-phospho-L-homoserine; Derived by automated computational
                     analysis using gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEX4297949.1"
                     /translation="QSGRFTVPPKALAAIRESFAAGRASEAETSATIAQTFRQSGYLL
                     DPHTAVGVAVAAGLELGTAPVVLLATAQPAKFPDAVTAATGVEPPLPAWLSDLYERPE
                     RYDVLANDQGVIEAYIRARSRAGGT"
BASE COUNT         1832 a         3593 c         4301 g         1827 t
ORIGIN      
        1 gtcatcagcc agtgggcaag ctcgttcatc agctcgagcg ccccctgcac cgtcgagacc
       61 ggctgcagcg gatggatgtc ggcgaagccg ggcaggcgcg ccatcttctc attgaggcgc
      121 gggttgtgct tcatggtgca cgaaccgagc ggatacatgc cgctgtcgat cgagtagttg
      181 aggcgggata gccgcacgta gtggcgcagt gcctcgggct cggtgaggcc ggccaggtcg
      241 agcggcgtgc ggcgccggaa gccaccgagg aattcgtcgg aaatgtcggc atccggcagg
      301 tcgacgccgg agtggccggt gtcgccgatc tcgaacagca gcggctcgtt gggaagcagc
      361 gaggaacccg aggtcgacgc gaaccccgag gtgcccgtgc cggtcggccg gccttgattg
      421 ttcatgctca ttgcagcgcc tcctcgaggc aggcggccag catgtcgatg tcgccgtcgg
      481 tggtgagttc ggtggcggcg aggacgatga ggttctcgac agtggggtcg tcggggatca
      541 gccggctgac cggcacgccc gcgagcacat cggcctgcgc cagcaggtcg accacgggcg
      601 cggccggctc cggcaggcgg atggtcatct cgttgaagaa gctcttgttc agcagttcga
      661 cgccgggcac ggcgcgcagc gcccgggcca gcgccacgcc gcgggcgtga ttgagccgcg
      721 ccagccgggt gagcccggct tcgccgagga ggcccatgtg gatggagaag gccagcgcgc
      781 agaggccgga attggtgcag atgttgctgg tcgccttttc gcggcggata tgctgctcgc
      841 gggtcgagag ggtcaggacg aagccgcgat tgccgtcggc gtcgacggtc tcgccgcaga
      901 ggcggccggg catctggcgg atgaattcct tcttggtcgc catcagcccg acataggggc
      961 cgccgaagtt gagggcgttg ccgatcgact ggccctcgca gacgacgata tcggcgccga
     1021 gcgcgccggg cgcctcgagc aggccgagcg agaccacttc ggtgaccacg acgaccagca
     1081 gcgcacccct ggcgtgggcg gcttccgccg ccttctcgac attgcgcaga tggccgaaga
     1141 aatccggggt ctggatgacg atggcggccg tgtcgtcgtc gatctggttg aggatgtcgc
     1201 cctgcccttc cggcgaggcc ggcaggcgaa tgaggctggg ggagttgtcg agataggtcg
     1261 agacgacgtc gcggtagtgc ggatgaaggc cgcccgagag gatgaccttg tccttgcggg
     1321 tgaggcggcg ggccatcagc acggcttcgg cggtggcggt cgagccgtcg tacatcgagg
     1381 cgttggcgac ctccatgccg gtcaggtgcg caacctgggt ctggaactcg aacagcatct
     1441 gcagcgtgcc ctgcgacact tccggctggt agggcgtgta ggcggtgagc cactcgctgc
     1501 gctggatcag gtgatcgacc gtggccggca cgtggtggcg ataggcgccg gcgccgacga
     1561 agaacggacc gtccgcggct gcatggttcc ttgccgcgag ggcgcgcatg tgcgcctcga
     1621 cgaggaattc gggcgaatgg gccggcaggt cgagcggccg cgccagccgg gccgccggcg
     1681 ggacggccgc gaacagcgct tcggcggagg cggcgccgat gacggccagc atgtcggcgc
     1741 gctcggcggc agtgtgcggg agatatctca tggtcaggcg gtgtgctgct tgtaggcggc
     1801 gtcgtccatc aggccatcga gctcggcggc attgtcgagc tgcagcttga agatccagcc
     1861 gtcggtgtcg ggggcggtgt tgatgaggcc gggctcgctg gtgagcgcgg tgttgacgga
     1921 ggtgaccgtg ccgctggccg gggcgtagat ctcggaagcg gccttgaccg actcgaccac
     1981 ggcggcctcg tcgcccttcc tcagcttctt gccgacgctg ggcagctcga cgaagacgat
     2041 gtcgccgagc tggtcctgcg cataggcggt gatgccaacg atggcagtcg cgccttcgag
     2101 gcggatgtat tcgtggtcct gggtgaattt gatggtcatg cagtggcctt ccggacgtag
     2161 cggtggggaa cgaaggggag cgcggcgatt tcggccggct gcaggcggcc gcggacggcg
     2221 acctgcagtt tcgtgccggg cgccgacgag gccggcggca cgaagccgag cgcgatggcg
     2281 cggttgaggg agggggagaa gccgcccgag gtgatgcggc cgatcgactg gccggccacg
     2341 tcgaggattt cggcgccctc gcgggccggg gcgccatcga cgaacaggcc gacgcgaagg
     2401 cgcgcaaggt cgccggcgaa ttccctgagg acgcggtcgg cgccggggaa gtcgcgggcc
     2461 tcgcggcggc gcttggagac ggcgaaattg agcccggcct cgctgggcga gacggtctcg
     2521 tcgaggtcgt ggccgtagag cggcaggccg gcctcgaggc gcaggctgtc gcgggcgccg
     2581 aggccgatcg ggcgaacgcg gggatcggcc agaagcgcgt tccagagttg cggcgcgaat
     2641 tcggcgtcga ccaggatttc gaagccgtct tcgccggtgt agcccgaccg cgagatgatg
     2701 agggaggtgc cggcccagtc gaagctgcga caggtcatga agccgagacc ggcgacgccc
     2761 gggatcagct gttcggcgac ggccgccgcc tcgggcccct gcagcgcgag gagcccgccg
     2821 gtatcggccc ggtgcagcgt ggcacggccg gcggtggccg cctcgatgcg ggcccagtcg
     2881 gccgctttcg tgccggcgtt gacgatgatg tagagcgtgc cggcccaggc cggatcgtcg
     2941 ggccgctcga ccatcaggtc gtcgagcgtg ccgcccgcat cgttgagcag cagggtgtag
     3001 cgcatctggc ccggcttcag tccgcggata tcggcggtga ccagcggctc gaccagcgcg
     3061 gcaatcgtcg cgtggtcacg ctcgggatcg ccggacttgt cgtcgagcat cagcaggctc
     3121 gggcccatgt gcgaaacgtc gaacaggccg gcgtgctcgc gggtccattt gtgctcggca
     3181 atgatgccga cgggatattg caccggcagc gaatagccgg agaacggcac catgcggccg
     3241 ccgagcttga tgtgctcgtc gttgaggacg acggtcttga gcggttcagc ttgcggctct
     3301 ggcacgggac accctggggt cggttgcacg attgcccgcc gctcgcgcgg cgcgccgtgc
     3361 cccctctgtc cgctgacctg agagatttcc cggagagcct atgctccggt tgctccttcg
     3421 gtggagcctt tgcggctcgc tttccagagt gagccccaag aggctcatgt tcttccgatg
     3481 gcctgatccg aaaagtctgc aacttttcgg ggccatcttg gccgactgcg gtcccttgtg
     3541 cctgagcgtt tccggggcgg ttgcgccttc ggcctccagc cggtcgcccg gctggatgtc
     3601 tcccgcagtc gaattatcct gacgagattg ctgcgccggt gtcaacggcg cggcgaaact
     3661 tatccctgct tgggggccgg accgctgtcg aagccgaccc agatggtgat gtcgtcgcca
     3721 ttgacgtagg ggatctggac gttctcgacc accttgacga aatcgttcga ctgcgccggc
     3781 ggagtgatgg cgacggggat gtcgtatttc tcggagaaca gcgccgtgct gtcggcgcgt
     3841 tcaacggcaa agcgcagcgg cagatccacg ctgctctggt tgcccgacgg gccgagcatc
     3901 agccggccga cgacgcccat cttgacggtg atgaggccat tggagacgac gcagttgcgc
     3961 gactgcttgt cgatgaccgc ctggtactgc aggtcgttcg cattgccgac cttgccgttg
     4021 ccgtaataat acagcgcctc ggcgccgggg cgtaccttga tcggcgggca ctgcgtggcg
     4081 atggccggca gcgccgggct gtcggcggcg atctcggccg gcgaggcggt ggcgttctgc
     4141 agttgcgtgg tggcggccga tggcgtgccg ccgccgccga acaagccacc catcgtacat
     4201 cccgacagca tcgccgcaac ggccgcaagc cccgcgatgc gtactcccaa tgccccactc
     4261 gccaacgctc tactccctcg ccccgacgtc actgcaccgt ttccccttgc agtgccagaa
     4321 gaatggcagg cgcgccgctg actgtcacgc cagagacgtc ctgcacgaaa agcttgtcga
     4381 cgacgcccgc gcggacaatc atcgcgaagc gcgcgtagcg cttgccgaga tctgggaaat
     4441 tctttgcgag cccaagcgct tcggcgaatt cggcgcgcgg atcggcgatg aaatcgacga
     4501 cgccgagggc ctcgctgcgt tcggcccagg ctttcaccac atgatggtcg ttggcggcag
     4561 cgcagacgat gcggtcgacg ccggacgccc ggagcttgcc ggcggcggca acgaaaccgg
     4621 gcagatggct ggtgtcgcag gtcggggtga aggcaccggg gacggcaaag agcaccacgg
     4681 tgccgctgcc gaggatggcc gcggtgtcgc tgtcgctcac gccgccggca tcgacaagtt
     4741 tgacggggat tgtcggcagc ctgtcgccgg tttggatcat ctatgaagtc cggatcttgc
     4801 ggggccgggc gccgctattg cgccgcaggc tcgatcttgc gggttaccgc ataaggcccc
     4861 atgggggtca tgaatgtcaa ttgaacggaa cggccctcca gccccttcgc tcccgctccg
     4921 ccgagcggcc gcagcgtcca taggtttcca tccgggcttt tttgcggcgt ttcgaagagg
     4981 atggacggat cgcccacatc ggcgatcagc gaggtgaggt ccagcgaggg atcggcgccc
     5041 gcgatcgcca gcccggcgcc atctgtcgag aggttgaccg cgccgaaggg ctcggccggc
     5101 tggtcccacg cgatcggggt gcgggcaacc gcctggtcga gccggatggc ctgcgccgca
     5161 tcgggcttgc cgaagtccac cggcagctcg aactgcgcct gggcggggac gcagatgtcg
     5221 gagcagatgc cgagcgcgat actggcgctc agggtcgcgg tggcgccgcc ggccgacagc
     5281 cggaccggga gcacgagcgt gccgtgatag acgtagtcga gaaagccgcc ggtgtggtcg
     5341 atctcgggga acggccagag cagctgcgga tcgccgagcc cgctcgaggc ggagaaatcg
     5401 atctgcgtcg gaatgcccgt ctcgccggga atgcgccagt aggtcttgct gccggccggc
     5461 atgtcgagct cgaggccggc gagcgtggtg ccgtcgctca gcgcgtcgga ggagatcagg
     5521 cgggcctgca cgccgggcgc gagctgctgc cacggcgtcg cgccggccaa ggcgggcgag
     5581 gcagcgagcg tcagacagag cagcaggaca aaacgaacca tgcgggctcg atagcgcacc
     5641 agcgggcaac aatgaagcca cagccgatca gcgctgcgtg accgggatat tgccgcaatg
     5701 gcgcgctgga gtagattggc ggcacggaga ggacgatgat ttccttcaag gggcagtttc
     5761 tggtggcgat gcccgggatg ggcgacgagc ggttccgcga caccgtgatc tatgtggtgg
     5821 gccacggtga cgaaggggcg atgggcctcg tggtcaacca gtcggtcgat gacatgcact
     5881 tcgccgatat cctcgaggag ctcgggctgg gggagaagga ccagatcatc cgcctgccct
     5941 cgacggtgcg cgaccgcgag gtgctgcgcg gcggcccggt gcagcgcgga cgcggcttcg
     6001 tgctgcactc gccggactat ttccgcgagg gcaattccta tgccgtcaac gacgacatct
     6061 gcctgaccgc gacgctcgac atcctcaagt cgatggcgtt ccggaacgcg ccggccgatg
     6121 cggtgttcgc gctcggctat tgcggctggg cgccgggcca gctcgagaac gagatcgcgc
     6181 tcaatggctg gctgaccgtg ccgttcctgc gcgagctgct gttcggcacg ccgctgtcgg
     6241 agcgctacga catggcgctg agccagctgg gcattacccg cgccagcctc agcggggcgg
     6301 cgggacacgc ctgaccgcta gcggcccagc tgagccgaaa gcttcttgcc gaaatcggcg
     6361 ccgctcatcg ccgccccgaa ggcgaagccc tgcgcgaact ggcagttgag ctgctgcagg
     6421 cgctcgatct cctcgagcgt ctcgacgcct tcggcgatga cggtcaggtc gagctccagc
     6481 gccagcgcga cgatcgagcg gatgatcggc ccctgcgtgt gggcgagccc ggaatcgtcg
     6541 gcgatctgga cgaagggcgc ggggatcttg agggtatcga ccgggaaccg gtggaggtag
     6601 ctcagcgacg agtgcccggt gccgaaatcg tcgagcgcca gcccgaggcc gagcgccttg
     6661 agggcctgca gcatgtaggc cgagtgctcg ggattggcca tcacctggcc ctcggtgatc
     6721 tcgagcttca aatggccggc gatggcgcga ttttcggcca ccagagcgcg catgtcggtc
     6781 aacaggctct cggtctgcag ctgggtgggc gagaggttga cggagacgaa gaagtcctcg
     6841 ggaatgggca gcgtgcgcat ccactcgcgc gtctggccga cggcctgctc gaaggccagg
     6901 cggccgagcc gctcgatcat gccggtgcgc tcggccagcg gcacgaattc ctccggcggc
     6961 acgatgccgc gctgcggatg gttccagcgc atcagcgcct cggcgccggc gatctcgccg
     7021 gaatggatgt ccatgatcgg ctggaactgc acctcgagct caccgtggcg caggccgcgg
     7081 tcgaggtcct cctcgctggc ccgggtgtag gcggcgatcg agcgggccga ggcgcggtag
     7141 gcctcgatgc ggtcgccgcc gaggcgcttg gcgtagtaca tcgccagctc ggcgtcgcgc
     7201 agcacgtcct cggccgtggc cgggttgccg tcatagatgg tgacgccgat cgaggcggtt
     7261 aggctcaggt cgcgctcgcc gaaattgaag ggcgatttga gggccttgcg tatctgctcg
     7321 gcggtctcgg caatcttgcc ggccgccgcc tcggaggcga ggatcacggc gaactggtcg
     7381 ccctgcaggc gggcgacggt gtcgagcggc cgcatgatgc gggcgacgcg gcgcgagatg
     7441 gcgagcagca ccgaatcggc ggcggaatgg ccgacgcgct cctcgagctc catgaagcgg
     7501 tcgatgtcga gcaggaacac cgccggcttg atgccgttgg gcagcttggc gcggctgagg
     7561 gcgcgctcga gccggtcgat gaagagctgc ttgttgggca ggccggtgag gctgtcgtgc
     7621 accgcatcgt gcagcaggcg gtcgcggctg gcgcggtcct cgttgacgtc ctgcagcgtg
     7681 ccgacgatgc gattgacctg gccgtcgccg ccgagcaccg gcttgacgcg catgcggaag
     7741 gtgcggctcg agccatcgtg ggcggcgagg cggatatcgg tcgaaacctt gccgcgccgc
     7801 agctcgacca gtgtgtcgaa cgccgttctg aagcggtcgc ggtcgtcggg atggatgcgg
     7861 tcgagccagc gcttgatggc gccgcgcagc gcccctcgcc gctcgccgag gcggacggaa
     7921 agctcgtccg acaccgcgac gcggtcgcgt tcgatgttcc agtcgaagac gaaatcgccc
     7981 gagccggtga gcgccagggc ccggcgctcg acctcgctca gggtgccgat cgacacctgg
     8041 ccctcggaga aggcgtgctg caccgaggtg aagccgagca gcatgacgat gagcaccagg
     8101 ccgccggcga cggccgactg cgcgacgtcg ttggagacct gcccggtgat caccagccag
     8161 ccgtagaaga tccaggcgat gtagatgatc caggtcggca ccagcagcac ggcccggtca
     8221 tagccgcgca gggccagcag caggatcagg aagaagccgg tgagcgccag cagcgccagc
     8281 accagccggg cgatcgtcgc ggcgaccgag ggctgcagga aggcaaagcc gaacagggcg
     8341 aggaacacaa ccgtcagcgc cagcgccagg gtgatgaagc gcaggtgcca tcggtgaagg
     8401 ttgaggtaga tgaacagaaa cgcgaacaga gtcgtggcga tgccggcctc ggcggcggcc
     8461 cggaacggcg cggtattgcc gttggagatg ccgatcagcg gcccgaagac gccgaaatcc
     8521 accagcaggt agaccagcac cgcccacgag aaagcggcgg tcgccggaaa gatgccgcgg
     8581 ccgcggacga cgaacatgat ggtgagaaac actgccgcca gcgaggcgac gccgagcacc
     8641 acgccgcgga agagcgtgaa cgaattgatg tagtcgcggt aggcgtcggg cttccacaga
     8701 tacagttcgg gcagcgtgct gccgctgagc tcggcaacga aggtcaccgt cgctccggga
     8761 tcgagcgtca cctggaagac gtcggcctcg cggtcggcga cgcggaccgg gcggatgccg
     8821 gcgctggggg tcagcgcgga gacccgctcg gagccgaggt cgggccggaa gaagccggcg
     8881 ccaggctgca ccgccgatcc cggaagccgg aagaagggcg ccaccagcag ccggtccatc
     8941 tgggcgtcgg aatcgttctt gatggcgaac agcgcccagg tcgggttggc gccgttctgg
     9001 ctggccagca cttcgacccg gcggatgatg ccgtcctcgc ccggcgcggt cgacagctgg
     9061 atcttgccgt tggtgccctg ggcgatgtcg acggcggaga tcaggttgac ggcgttgacg
     9121 tcctcggggg cggtgaccac gtcgaaggcg gccaccggcg tcgccccggc cagcgcgaca
     9181 gcaagcacca ccgcgagggc gaggaaatga cgcattcgtt cgatgacaac cgcgcccgca
     9241 acgttagtcc agcggacttg gtatcggggt ttcccccttg cgacaagcat tcagcgcccg
     9301 gcggtcttgt ggcgggcgtc ccagcgctcg cgggtcaggg caaacagcac atgatccgcc
     9361 catttgccgt cgatctgcag gtaggtctcg gcgaagccct cttcccggaa tccgtttttt
     9421 tcaaggacgc ggcggctggc gacgttgtgc ggcaggaagg cggcgtgcag ccggtgcagg
     9481 ccgagcgttt cgaagaagaa cggcagggtg aggccgaccg cttcgctcat caggccgcgg
     9541 ccggcgtact cctgacccat ccagtagccg aggttgccgt gctgggcggc gcggcgccgg
     9601 atgttcgaga gggtgaggcc tccgacgagc gtttcgccgc cggcggcggt ctcgaagatc
     9661 aggaaggagt aatcggtgcc gcgcagcgct tcccggcgac cgcggccgag gcggacgccg
     9721 aaagcctggc tgttgaggtc ggcgtcggtc cagcgcggct cgtaaggctt gaggaactcg
     9781 cgcgaccggc ggcgcagcgc ccgccaggcc tcgaagtcgc ggccgcgcgg cgcccgcagc
     9841 acgatgcgcg gaccggtgag gaccggcgtc ggatcgcgcg cgaaccagcc gagcatcacc
     9901 atcgactagt tcttgaggcg ggaggcgatc gcctcgtagt cgggaagttt ggcgaccggg
     9961 ccgatgccgg cgagcgacat gcggccgttg tcgaacacct gccgggcgat ctgcttgacg
    10021 cgatcggcgg tgatccggtt gatgcggtcg acggtttcct gcagcgggat cggccggccc
    10081 cacaggatct gctggcgggc gagctggccg gcgcgcgaac tcggactctc gagcgacatc
    10141 agcaggccgg cgcggatctg gttgcggacg cgcatcacct cctcgtcggt gatggtctcg
    10201 gtggccttgc gcagttcgtc gaggacgacg ggcacgaggt cggtgacctc ggcctcgccg
    10261 gtcgaggcgg cgacgccgaa gatgccgctg tcggcgaagg cccagtggaa ggcatagacc
    10321 gagtagcaga ggccgcgttt ctcgcgcacc tcctggaaca gccgcgagga catgccgccg
    10381 ccgaggatgg aggcgagaat ctgggcggcg tagaagccat ccgaattgta ggcgcgaccc
    10441 tcgaagccga ggacgatgtg ggcctgctcg tggtcggaca gaagccgctg ctcgccgccg
    10501 acatagtggg ctttttcggg cgccggcgcg ccatcggcgc ggaggccgct gaagcgcttg
    10561 tcggagattt cgaccagcgc ttcgtggtcg acgttgccgg cggcgcagac gaccatctgg
    10621 tcgcccacgt agttgcgctc catgtagtcg cggatggtcg cgggggagaa gctcttgacc
    10681 gattccaccg tgccgaggat ggtgcggccg atcggctggt cgggataggc ggcctgctgg
    10741 aacaggtcga agacgtggtc gtcggggttg tcgcgggcgg cgccgatctc ctgcacgatc
    10801 acctgctgct cgcggtcgag ctcggactgc tcgaacagcg agttctgcag gatgtcggcg
    10861 aggatatcgc cggcgagcgg cacgtcttcc ttgaggacgc gggcgaagta accggtgtgc
    10921 tcgaccgagg tcgcggcgtt gagatcgccg ccgacgtttt cgatggcctc ggcgatctgc
    10981 agcgcgttgc gggatttcgt gcccttgaag gccatatgtt cgagcacgtg ggaaatgccg
    11041 tgctcgacgg cggtctcgga gcgtgagccg gccttcaccc agatgccgag cgaggcgctc
    11101 tcgagatgcg gcatgtcgtc ggtgatgacg gtcatgccgt tgctgagggt cgtcgtgcgc
    11161 acgctcactt caggttcccc cggcccggga ccgtgcccga atgtaggctt cgatgacgcc
    11221 ctggtcgttg gccagcacgt cgtagcgctc cggccgttca taaaggtcag acaaccatgc
    11281 cggcagaggg ggttcaactc ccgtcgcggc cgtgacggcg tccggaaact tggcgggctg
    11341 ggcggtggcg agcagcacca ccggagcggt gccgagctcg aggcccgcgg ccacggcgac
    11401 gccgacggcg gtatgcggat caagcagata gccggattgc cggaaggtct gcgcgatggt
    11461 cgcggaggtc tcggcctcgc tggcgcggcc cgccgcgaag ctctcgcgga tcgccgcaag
    11521 ggccttcggc ggcacggtga agcggccgga ctg
//
LOCUS       DATAZA010000313         1800 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3283771, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000313 DATAZA010000000
VERSION     DATAZA010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1800
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3283771"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1393
                     /locus_tag="VHZ56_07990"
     CDS             <1..1393
                     /locus_tag="VHZ56_07990"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX4297950.1"
                     /translation="GRRIMMLHRSGVSPNLVTANLVTQNLARFVVETRWDDLPSPVRH
                     QAKRSLMNFFAVALAGCRTAPVEIALRSLAEFSGGKQATIIGRTERIDALSAAFLNAA
                     GANVHDFCDTHVRTVIHPTAPVAPALLALAELRQVSGPDLLLAFVLGNEIQARIGLAI
                     SPSHYSRGWHITSTCGVFGAASGAGRLLRLDERKMVWALGTAATQAAGLCECLGTAAK
                     SASVGNTARNGLWSALLAEKGFDGPPEPLAGVQGYYHAIAETPELSVVTDGLGETWEI
                     MATSYKPYPCGFVIHPVLDCVLDWRHDHPAAEVVRVVVRGNPLLSDRADRPEVSTGRE
                     SQVSVQHAVAAALATGRAGLDEFTDARVRDPKVLALRSKVEVVRDPAFSTIAADVDIT
                     TADGTIHRMSQSAARGSDVNPMSDTDLEDKLRKAAAGWEPRHDVVPLIDAIWALDGAE
                     DVSALTSLAVPSK"
     gene            1558..1767
                     /locus_tag="VHZ56_07995"
     CDS             1558..1767
                     /locus_tag="VHZ56_07995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008132873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297951.1"
                     /translation="MNDLVRYRAMESLCRQSAVFRPLESWRLLAEAEMWHHKAEEAIA
                     SRFMECNGSLLSGAPVDNRERPQAA"
BASE COUNT          313 a          547 c          608 g          332 t
ORIGIN      
        1 cgggaggagg ataatgatgt tgcaccggtc cggcgtgagc ccaaaccttg tgaccgcaaa
       61 ccttgtgacc cagaaccttg cccgctttgt cgtcgagacg cggtgggacg acctcccgtc
      121 gccggtgcgg catcaggcca aacgctccct gatgaatttc ttcgcggtgg cactggcggg
      181 ctgccgcacc gcgccggtcg agatcgcact gcgctcgctg gctgaattct ccggcggtaa
      241 acaggcaacc atcatcggcc gtaccgagcg tatcgatgcc ctgagcgctg cgttcctcaa
      301 tgccgccggc gccaacgtgc atgatttctg cgacacccat gtgcgcacag tgatccatcc
      361 gaccgccccg gtcgcgccgg cgttgctggc gctggccgaa ctgcggcagg tgagcggacc
      421 tgaccttctg ctggcctttg tcctcggcaa cgagatccag gcacgaattg ggctggcgat
      481 atcgcccagc cattacagcc ggggctggca catcacctcg acctgcggcg tgttcggcgc
      541 cgcaagcggc gcaggcaggc tgctgcgcct cgatgagcgg aagatggtgt gggcgctcgg
      601 gaccgcggcg acgcaggcgg ccgggctgtg cgaatgtctg ggcaccgcgg ccaagagcgc
      661 cagcgtcggc aacacggctc gcaacgggct gtggtcggcg ctgctggctg aaaaaggctt
      721 tgatgggccg ccagagccgc tggccggcgt acaaggctac tatcatgcga tcgccgagac
      781 gcccgagttg tcggtggtca ccgatgggct cggcgaaacc tgggagatca tggcgacctc
      841 ctacaagcca tatccttgcg gtttcgtgat tcatccggtg ctcgattgcg tgctggactg
      901 gcggcacgat catccggcgg cggaggtggt gcgggtcgtg gtacgcggca atcctctgct
      961 cagcgaccgg gccgaccgtc ctgaggtctc gaccggacga gagtcgcagg tcagcgtgca
     1021 acacgcggtg gcggcggcgc tggcaaccgg ccgggcgggt ctcgatgagt tcaccgatgc
     1081 ccgcgtgcgc gatccgaagg tgctggcctt gcggagcaag gtcgaagtgg tcagggatcc
     1141 ggccttctcc accattgccg ctgatgtcga tatcaccacg gccgacggca cgattcacag
     1201 gatgtcgcag tccgcggcgc gcggcagcga cgtcaatccg atgagtgaca ccgatcttga
     1261 ggataaactg cgcaaggccg ccgccggctg ggagccacgg cacgacgtcg taccgctgat
     1321 cgacgcgata tgggccctgg atggcgctga ggatgtttcc gccctgacgt ctttggcggt
     1381 cccatcgaaa tgatgcgcgc agggcgtgta tcgtcttacg cgtgtcgtca acgcctgcta
     1441 ttggccagtc gatccggttc cagagtctgg cggcggactc ttctgtacac attcgtgatg
     1501 acaccgttcc gatatcggct gtaaaatgat tcggtgcagg ctggttggag gcgagagatg
     1561 aatgacctcg ttcgctaccg cgcgatggaa tccttgtgcc gccagagtgc ggtgtttcgc
     1621 ccgctcgaaa gctggcgatt gctcgccgaa gcggaaatgt ggcatcacaa agccgaggaa
     1681 gcgatcgctt cacgtttcat ggaatgcaat ggctcgctct tgagcggggc gccggtcgac
     1741 aaccgtgagc gcccccaggc tgcgtgagca aagagctgct tgaggcaaga gccgtgagaa
//
LOCUS       DATAZA010000314         2280 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1889115, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000314 DATAZA010000000
VERSION     DATAZA010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2280
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1889115"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1185)
                     /gene="rho"
                     /locus_tag="VHZ56_08000"
     CDS             complement(<1..1185)
                     /gene="rho"
                     /locus_tag="VHZ56_08000"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEX4297952.1"
                     /translation="MENLKLSELKAKSPAELLTFAEEYEVENASTMRKQELMFAILKE
                     LAAREVEITGEGVVEVLPDGFGFLRSPDANYLPGPDDIYVSPSQIRRFSLRTGDTVEG
                     EIRSPKEGERYFALLKVATINFEDPEKIRHKVNFDNLTPLYPDQRLRLELPDPTNKDK
                     SARVMDLVAPIGKGQRAIIVAPPRTGKTVLLQNIAQSVATNHPECYLIVLLIDERPEE
                     VTDMQRSVRGEVISSTFDEPASRHVQVAEMVIEKAKRLVEHKRDVVILLDSITRLGRA
                     YNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEDGGSLTIIATALIDTGSRMDEVI
                     FEEFKGTGNSEIVLDRKVSDKRIFPAMDVTKSGTRKEELLVEPDILRKMYVLRRILNP
                     MGT"
     gene            complement(1442..1888)
                     /gene="hemJ"
                     /locus_tag="VHZ56_08005"
     CDS             complement(1442..1888)
                     /gene="hemJ"
                     /locus_tag="VHZ56_08005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019170888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase HemJ"
                     /protein_id="HEX4297953.1"
                     /translation="MDWTGFALTWVKALHVISVIAWIAGMMYLPRLFVYHAAAETGSI
                     QSETFKIMERRLYRGIITPAMVLTWVFGLTMVFTPGIIDWHQGWPWVKAVAVILLTGI
                     HGYYGRQVRNFAADRNTRPQGFWRVVNELPFVLVIIIVIMVIVKPF"
     gene            complement(1891..>2280)
                     /locus_tag="VHZ56_08010"
     CDS             complement(1891..>2280)
                     /locus_tag="VHZ56_08010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase family protein"
                     /protein_id="HEX4297954.1"
                     /translation="AFRAQVIEPNRRIVAGVRAQIPGAPIIGFPRGAAGMVAEYAAVT
                     GVDALGLDYSMPVEFADRALPPALPVQGNLDPLRVVAGGPQMEARAEAIIAGFANRPH
                     IFNLGHGIVPETPIEHVERLVRLVKGG"
BASE COUNT          386 a          708 c          780 g          406 t
ORIGIN      
        1 cgtgcccatc gggttgagga tgcggcggag cacgtacatc ttgcgcagga tgtcgggctc
       61 gaccagcagc tcttccttgc gggtgccgga cttggtgacg tccatcgccg ggaagatgcg
      121 cttgtcgctc accttgcggt cgagcacgat ttcgctgtta ccggtgccct tgaactcttc
      181 gaagatcact tcgtccatgc gcgaaccggt gtcgatcagc gcggtggcga tgatggtcag
      241 ggaaccgccg tcctcgatgt tgcgggcggc gccgaagaag cgcttcggac gctgcagcgc
      301 gttggcgtcg acaccgccgg tcagcacctt gcccgatgac ggtacgacgg tgttgtaggc
      361 gcggccgagg cgggtgatcg aatcgagcag gatcaccacg tcgcgcttgt gctcgacgag
      421 gcgcttggcc ttttcgatca ccatttcggc gacctgcacg tggcgcgagg ctggctcgtc
      481 gaaggtcgag gagatcactt cgccgcgcac cgagcgctgc atgtcggtga cttcttccgg
      541 ccgctcgtcg atgagcagca cgatcaggta gcactcgggg tggttggtcg cgaccgactg
      601 cgcgatgttc tgcagcagca cggtcttgcc ggtgcgcggc ggcgccacga tgatggcgcg
      661 ctggcccttg ccgatcggcg ccaccagatc catcacccgc gccgacttgt ccttgttggt
      721 ggggtcgggc agttcgaggc gcaggcgctg gtcggggtag agcggcgtga ggttgtcgaa
      781 attgaccttg tgccggatct tctccggatc ctcgaaattg atcgtcgcga ccttcaacag
      841 ggcgaaatag cgctcgccct ccttggggct gcggatctcg ccttcgacgg tgtcgccggt
      901 gcgcagcgag aaccgccgga tctggctggg cgagacgtag atgtcgtcgg gaccggggag
      961 gtagttggcg tcgggcgagc ggaggaaccc gaagccatcg ggcagcacct cgaccacgcc
     1021 ttcgccggtg atctcgacct cgcgtgccgc cagttccttg aggatggcga acatcagttc
     1081 ctgcttgcgc atggtcgagg cgttctcgac ctcatactcc tcggcgaagg tgaggagctc
     1141 ggccggcgac ttggccttga gctcgctgag cttcagattt tccatgcggc gaatgaccct
     1201 ggagagactt ggatgtgggg aaggggggtg caccgcggtg acgccggacg gcgtgcgctt
     1261 gttggtgcga ggcgcttcaa atagcccgaa gcggcgtcgc attcaagagg cgggtgaggc
     1321 ggccgatgga ttcacgtgaa acgcagccaa ctcccaaatg cgatccgcgg gaggggcact
     1381 gatgtttctt gctgctccgg acgagcgatc ccaggagggc tcgtccgccc agccgcggga
     1441 atcaaaacgg cttcacgatc accatgatga cgatgatgat cacgaggacg aacggcagtt
     1501 cgttgacgac gcgccaaaag ccctgcggcc gggtgttgcg gtcggcggcg aaattccgca
     1561 cctgccggcc gtaatagccg tggatgccgg tgagcaggat caccgccacc gccttcaccc
     1621 acggccagcc ctggtgccag tcgatgatgc cgggggtgaa caccatggtc agcccgaaca
     1681 cccaggtcag aaccatggcc ggggtgatga tgccgcggta gagccgccgc tccatgatct
     1741 tgaaggtttc cgactggatc gagccggttt cggcggcggc gtgataaacg aacagccgcg
     1801 gcagatacat catgccggcg atccaggcga tcaccgaaat gacgtgcagc gccttgaccc
     1861 aggtcagcgc aaaacccgtc cagtccatcc tcagccccct ttgaccagcc gcaccagccg
     1921 ctcgacatgc tcgatcggcg tttcgggcac tatcccatgc ccgaggttga agatatgcgg
     1981 ccgattggca aagccggcga tgatcgcctc ggcccgcgcc tccatttgcg ggccgccggc
     2041 gaccacccgc agcggatcga gattgccctg caccggcagg gcgggcggca gggcccggtc
     2101 ggcgaattcg accggcatcg agtaatcgag gccgagcgca tcgaccccgg tgacagccgc
     2161 gtattcggcg accatcccgg cggcgccccg cggaaagccg atgatcgggg cgcccgggat
     2221 ttgcgcgcgg acgccggcga cgatccggcg gttgggctcg atcacctgcg cccggaacgc
//
LOCUS       DATAZA010000315         2303 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_962097, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000315 DATAZA010000000
VERSION     DATAZA010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2303
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_962097"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..513
                     /locus_tag="VHZ56_08015"
     CDS             <1..513
                     /locus_tag="VHZ56_08015"
                     /inference="COORDINATES: protein motif:HMM:NF025214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX4297955.1"
                     /translation="PGSLLVLRSSGHYPPGIEAGLLKRFGAAGFEAGRVRIDPKVIGY
                     DRHLATYEEIDIGLDPFPYNGGTTTVEALYMGVPVLAKAGDRYVAHMGESILHNAGLP
                     EWIAADADEYAALGARFARDLDGLADLRAGLRARMLASPLFDAPRFARNFEAALRGMW
                     GAWCAAQRRA"
     gene            590..1600
                     /locus_tag="VHZ56_08020"
     CDS             590..1600
                     /locus_tag="VHZ56_08020"
                     /inference="COORDINATES: protein motif:HMM:NF042769.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX4297956.1"
                     /translation="MIRPLLAAFALFVTAIVPAMAQVPNLLPNIMDPFNVGAAMDDAT
                     VLGKDIPFADGDRFKLDIYGPKNPTGPAPVVMFIYGGSWKQGSKNDYQFVGRALAANG
                     FIAVIPDYRLYPEVTYPSFLEDNASAVKWIEDHIGSYGGDTSRFFLAGHSAGAYNAVM
                     LGLEHSFLNEYHVTMPIKAIAALSGPFDFYPFEYDDVRNVFGHTDNPEGTQPVNLVAA
                     DEPPMLLLQGDQDPIVRMQNTDHLGRKLKAAGDWVTVKYYQNIGHMEVAFAIGAMWRW
                     RAPVLADMVAFFTQFGAFPSGVPRPVFTPAPPEGETAIEATITKLDSILDPIDDERRR
                     ME"
     gene            1663..>2303
                     /locus_tag="VHZ56_08025"
     CDS             1663..>2303
                     /locus_tag="VHZ56_08025"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003554800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX4297957.1"
                     /translation="MDYTRLGHSGLEVSRICLGCMSFGDNSKGREWVLGLDESRPIIR
                     AAWEAGVNFYDTANVYSAGTSEEITGTVLWELASRDEVVLATKVHGEMRKGPNGHGLS
                     RKAILSEIDNSLRRLKTDYVDLYQIHRFDRQTPIEETLEALNDVVRMGKARYIGASSM
                     WAWQFMKMLETQEANGWARFVSMQNQINLIYREEEREMLPLCVEEGIGVIPWSP"
BASE COUNT          398 a          732 c          793 g          380 t
ORIGIN      
        1 ccgggctcgc tgctggtgct gcgctcgtcc gggcactatc cgccggggat cgaggcggga
       61 ctgctcaagc gcttcggcgc cgccgggttc gaggcgggcc gggtgcggat cgatccgaag
      121 gtcatcggct atgacaggca cctcgcgacg tacgaagaga tcgacatcgg actcgacccg
      181 tttccctaca atggcggcac gacgacggtg gaggcgctgt acatgggcgt gccggtgctg
      241 gccaaggccg gcgaccgcta cgtggcgcac atgggcgaga gtatcctcca caatgccggc
      301 ctgccggagt ggattgccgc cgacgccgat gagtatgcgg cgctcggggc gcggttcgcg
      361 cgcgacctcg acgggctggc ggacctgcgg gcagggctca gggcgcgcat gctggcttcg
      421 ccactgttcg atgcgccgcg cttcgcacga aactttgaag cggcgctgcg cggcatgtgg
      481 ggcgcctggt gcgcggcaca gcgccgcgcc tgagcgggcg ggtcacaata tcttcagctt
      541 tgccgggcac aggcgaaggc tcctcccgtc accacccgag tcccgcccgt tgatccgtcc
      601 gctgcttgcc gctttcgcgc tgttcgtcac ggccatcgtg cccgccatgg cacaggtccc
      661 gaacctgctc cccaacatca tggatccgtt caacgtcggg gcggcgatgg acgatgcgac
      721 ggtgctgggc aaggacattc cgttcgccga tggcgaccgc ttcaagctcg atatctacgg
      781 cccgaagaac ccaaccgggc cggcgccggt ggtgatgttc atctatggcg gctcgtggaa
      841 gcagggcagc aagaacgact accagttcgt cggccgggcg ctggcggcga acggcttcat
      901 cgccgtcatc cccgactacc ggctctatcc cgaggtgacc tatccgtcgt tcctcgagga
      961 caatgcgtcg gcggtgaagt ggatcgagga ccacatcggc agctatggcg gcgacacctc
     1021 gcgcttcttt ctcgcggggc attcggcggg cgcctacaac gcggtgatgc tggggctcga
     1081 gcactcgttc ctcaacgagt accacgtgac catgccgatc aaggcgatcg cggcgctgtc
     1141 ggggccgttc gatttctatc cgttcgaata tgacgacgtg cgcaacgtct tcggccacac
     1201 cgacaatccg gagggcacgc agccggtcaa cctggtcgcc gccgacgagc cgccgatgct
     1261 gctgctgcag ggcgaccagg atccgatcgt gcgcatgcag aacaccgacc atttggggcg
     1321 caagctcaag gcggcgggcg actgggtgac ggtcaagtac taccagaaca tcggccacat
     1381 ggaggtggcg ttcgcgatcg gcgcgatgtg gcgctggcgg gcgccggtgc tggccgacat
     1441 ggtcgccttt ttcacccagt tcggggcgtt cccgagcggc gtgccgcggc cggtgttcac
     1501 gccggcgccg ccggagggcg agacggcgat cgaggcaacg atcaccaagc tcgattccat
     1561 cctcgatccg atcgatgacg aaaggcggcg gatggaatag ggtccgtcac ccacccatcg
     1621 tcgtttcctg aaacagcggc agccgccgcc gggagtgcaa gcatggacta cacgcgactg
     1681 ggccattccg gcctcgaagt ttcccgcatc tgcctcggct gcatgtcgtt cggcgacaac
     1741 agcaagggcc gcgaatgggt gctcgggctc gacgagagcc ggccgatcat ccgggcggcg
     1801 tgggaggccg gggtcaattt ctacgacacc gccaacgtct attcggccgg caccagcgaa
     1861 gagatcaccg gcacggtgct gtgggagctg gcgtcgcgcg acgaggtggt gctggcgacc
     1921 aaggtgcatg gcgagatgcg caaggggccg aacgggcacg ggctcagccg caaggcgatc
     1981 ctcagcgaga tcgacaattc gctgcggcgg ctgaagaccg actatgtcga cctctaccag
     2041 atccaccgct tcgaccggca gacgccgatc gaggagacgc tcgaagccct caacgacgtc
     2101 gtgcggatgg gcaaggcccg ctacatcggc gcctcgtcga tgtgggcgtg gcagttcatg
     2161 aaaatgctcg agacgcagga ggcaaacggc tgggcgcggt tcgtgtcgat gcagaaccag
     2221 atcaacctca tctatcgcga ggaagagcgc gaaatgctgc cgctgtgcgt cgaggaaggc
     2281 atcggggtga tcccgtggtc gcc
//
LOCUS       DATAZA010000316         3859 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3980247, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000316 DATAZA010000000
VERSION     DATAZA010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3859
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3980247"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..978
                     /locus_tag="VHZ56_08030"
     CDS             <1..978
                     /locus_tag="VHZ56_08030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHHA1 domain-containing protein"
                     /protein_id="HEX4297958.1"
                     /translation="RRLANRGIGALALAARVTGPLNPYHLGFLVGPRINAGGRIGDAA
                     LGTRLLMLDDEHEALVIAARLNDLNGERQRIEVEAVEEAARAAEAEIGSGEGPPVLVL
                     ASASWHAGVVGLVAARLRERFERPVFAIALNPDGTGTGSGRSMPGVDLGRAVIAAVEA
                     GIIARGGGHAMAAGVTLKPGQLGPFRAHLSENLAQSVGIARALTALNVDAALSARGAN
                     VPFVEDLERAGPFGSGNPQPVFAFPAHRAKFAEVVGAGGHVRFTLTSDDGARLKAIAF
                     RAATSPLGQALLGAGNDAPLHIAGTLGLDHYQGRAEVQLRVVDAAQPAP"
     gene            1122..2357
                     /locus_tag="VHZ56_08035"
     CDS             1122..2357
                     /locus_tag="VHZ56_08035"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane-fatty-acyl-phospholipid synthase
                     family protein"
                     /protein_id="HEX4297959.1"
                     /translation="MDKPAIEPQRPAPTLWSHLTSGVAAWFIERLIGRPKQGAVTITF
                     PNGRTRTYGRPGTGEHPSLVVHNFSMVTETLRRGTVGFAHAYMRGDVEVDDLTALFRY
                     FLQNRNEFQPKGQGWFGRAAQDIAYHMSRANTVDGSKENISEHYDLGNDFYAEWLDPS
                     MTYSSALFASDDQPLEEAQYAKYRRVADMAGVKAGDSVLEIGCGWGGFAETVARDYGA
                     TLYGITLSAEQLKYAQERLARQRLDNLATLHFEDYRHTEGQFDHIGSIEMIEAVGEEN
                     WPSYFQTVHDRLKPGGTAAIQAITIDEADFEGYRSTPDFIQRYIFPGGMLLTKKAMDE
                     QGRRVGLMLENVENFRLGYAKTLKLWRERFLERWHILQKMGFDEQFRRKWVYYLSYCE
                     AGFAEGSIDVGIYQYRKPV"
     gene            complement(2368..2802)
                     /locus_tag="VHZ56_08040"
     CDS             complement(2368..2802)
                     /locus_tag="VHZ56_08040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019966503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX4297960.1"
                     /translation="MNPLASWQFWALGSAGFAALTAVFAKVGIENVNSDFATFIRTIV
                     ILAAAGAMVWITGNWQSPGTVSPRSWTFIVLSGLATGLSWICYFRALKIGNAAQVAPI
                     DKLSVVLVAIIAALFLGEKMSPINWIGVALIGVGAVLTAVQL"
     gene            complement(2799..3095)
                     /locus_tag="VHZ56_08045"
     CDS             complement(2799..3095)
                     /locus_tag="VHZ56_08045"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008594743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HEX4297961.1"
                     /translation="MYGLIGRIKAQAGKRAALAAVLVQEDGGMPGCLSYVVAEDPDDA
                     DALWVTEVWVDEAAHKASLGLPAVQAAIARGRPLIAGFDSRVITNVLGGIGLAP"
     gene            complement(3149..>3859)
                     /locus_tag="VHZ56_08050"
     CDS             complement(3149..>3859)
                     /locus_tag="VHZ56_08050"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4297962.1"
                     /translation="ALRLAGEGGRIAVADIDRAAAEGVAAEIVAGGGTGFATICDLTS
                     ATSVDASFAETVERLGRLDVLVNAAGGDWDEPAFEEISDELWDRKIDLNLTGVARSIR
                     AALPSLIRSGPGSSVVTIGSINGNFAFSGFPYSAAKAGLESLTRNLAARYGRQGVRFN
                     LITPGTTRTRAWDGRDEQLRRLARLNPLGRVGEAADMAAAVAFLASDDASWITGINLP
                     VDGGFTTGRLSASIATDD"
BASE COUNT          620 a         1419 c         1240 g          580 t
ORIGIN      
        1 cgccgtctcg ccaatcgcgg catcggcgcg ctggcgctgg ccgcgcgcgt cactggcccg
       61 ctcaatccct atcaccttgg cttcctcgtc ggcccgcgca tcaacgccgg gggacgcatc
      121 ggcgacgccg ccctcggcac ccgcctgctg atgctcgacg acgagcacga agcgctggtc
      181 atcgccgcgc gcctcaacga cctgaacggc gagcgccagc gcatcgaggt cgaagcggtc
      241 gaggaagcag cgcgcgccgc cgaggcggag atcggcagcg gggagggccc gccggtgctg
      301 gtcctcgcct ccgccagctg gcacgccggt gtcgtcggcc tcgtcgccgc ccggctgcgc
      361 gagcgcttcg agcgcccggt cttcgccatc gccctcaacc ctgacggcac cggcaccggc
      421 tccggccgct cgatgcccgg tgtcgatctc ggccgcgccg tgatcgcggc cgtcgaagcc
      481 ggcatcatcg cccgcggcgg cggccacgcc atggcagccg gcgtcacgct caagcccggc
      541 cagctcggcc cgttccgcgc gcatttgagc gaaaacctgg cgcaatcggt cggcatcgcc
      601 cgcgccctga cggccctcaa cgtcgatgcg gcgctgtcgg cccggggcgc caacgtgccg
      661 ttcgtcgagg atctggagcg cgccggcccg ttcgggtcgg gcaacccaca gccggtgttc
      721 gcctttccgg cgcaccgggc gaagttcgcc gaagtggtcg gggcgggcgg ccatgtccgc
      781 ttcacgctga cgtccgacga cggcgcccgg ctcaaggcca tcgccttccg cgccgccacg
      841 tcgccgctcg gccaggcgtt gctgggcgcc ggcaacgacg cgccgctgca tatcgccggc
      901 acgctcggcc tcgaccacta ccagggccgg gccgaggtgc aattgcgtgt cgtcgatgcc
      961 gcacagccgg cgccctgaag cctttcagac ttgcatatct gtctgtggcc gctaaattat
     1021 cggtcaacaa cgatggatgg cgaaaccaat gcgccacgac cgtcgtattt ggacggatgc
     1081 tgcaccggcg gggcgggcag cgcgaacttg gacaaacggg tatggataag cctgccatcg
     1141 agccgcaacg gccagcgccg acgctttggt cccacctgac gtcgggtgtc gccgcctggt
     1201 tcatcgagcg cctgatcggg cgcccgaaac agggcgccgt gaccatcacc ttccccaacg
     1261 gccggacgcg gacctacggc cgcccgggca ccggcgagca tccctcgctc gtcgtccaca
     1321 atttctcgat ggtcaccgag acgctgcgcc gcggcaccgt cggctttgcc cacgcctaca
     1381 tgcgcggcga cgtcgaggtc gacgacctga cggcgctgtt ccgctatttc ctgcagaacc
     1441 gcaacgagtt ccagcccaag gggcagggct ggttcggccg cgccgcgcag gacatcgcct
     1501 accacatgag ccgtgccaac accgtcgacg gcagcaagga gaacatctcc gagcactacg
     1561 acctcggtaa cgatttctat gccgagtggc tcgatccctc gatgacctat tcgtcggcgc
     1621 tgttcgcctc cgacgaccag ccgctcgagg aggcgcagta cgccaaatac cgccgcgtcg
     1681 ccgacatggc gggcgtgaaa gccggcgaca gtgtgctcga gatcggctgc ggctggggcg
     1741 gtttcgccga gacggtcgcg agggactacg gcgccaccct ctatggcatc acgctgagcg
     1801 ccgagcagct caaatacgcc caggaacgtc tcgcccggca gcggctcgac aatctcgcga
     1861 cgctgcactt cgaggactac cgtcacaccg aaggccagtt cgaccacatc ggatcgatcg
     1921 agatgatcga agcggtcggc gaggaaaact ggccgagcta tttccagacc gtgcacgacc
     1981 ggttgaagcc gggcggcacc gccgccatcc aggccatcac catcgacgag gccgacttcg
     2041 agggctatcg ctcgaccccc gatttcatcc agcgctacat cttcccgggc ggcatgctgc
     2101 tgaccaagaa ggcgatggac gagcagggcc ggcgcgtcgg cctgatgctc gagaacgtcg
     2161 agaatttccg tctcggctac gccaagaccc tgaagctctg gcgcgagcgc ttcctcgagc
     2221 gctggcacat cctccagaag atgggcttcg acgagcagtt ccgccgcaaa tgggtgtact
     2281 acctgagcta ttgcgaggcc ggtttcgccg agggctcgat cgacgtcggc atctaccagt
     2341 accgcaagcc ggtctgaccg cccgccctca gagctgcacc gcggtgagca ccgcgccgac
     2401 cccgatcagg gccacgccga tccagttgat gggcgacatc ttctcgccga ggaacagcgc
     2461 cgcgatgatg gcgaccagca ccacgctgag cttgtcgatc ggcgcgacct gcgcggcatt
     2521 gccgatcttc agcgcccgga aatagcagat ccagctgagc cccgtggcca gccccgagag
     2581 cacgatgaac gtccagctgc gcggcgagac cgtgcccggc gactgccagt tgccggtgat
     2641 ccacaccatc gcgcccgcgg ccgccaggat gacgatggtc cggatgaagg tggcgaagtc
     2701 ggaattgacg ttctcgatgc cgaccttggc gaaaaccgcc gtgagcgccg cgaagccggc
     2761 cgatccgagt gcccagaact gccagctcgc cagcgggttc atggtgccag cccgatcccg
     2821 ccgagcacgt tggtgatcac ccggctgtcg aacccggcaa tcagcggccg ccccctggcg
     2881 atcgccgcct gcaccgccgg caggcccagc gatgccttgt gcgccgcttc gtccacccac
     2941 acctcggtga cccacagcgc gtcggcatcg tccgggtcct cggccaccac gtagctgagg
     3001 caccccggca tcccgccgtc ctcctgcacc agaaccgcgg cgagtgctgc ccgcttgccc
     3061 gcctgcgcct tgatccgccc gatcagcccg tacatcagct gcatgctccg ttgagaattg
     3121 tcgccgaccg cacgcctgcg caaccggatc agtcgtccgt cgcgatggag gcgctgagcc
     3181 gtccggtcgt gaacccgcca tcgaccggca ggttgattcc cgtgatccac gatgcgtcgt
     3241 ccgaggcgag gaacgcaacc gccgcggcca tgtcggcggc ctcgccgacg cggccgagtg
     3301 gattgaggcg cgccagccgc cggagctgct cgtcccgccc gtcccaggcg cgcgtccgcg
     3361 tggttcccgg cgtgatcagg ttgaaccgca cgccctgccg accgtaccgt gccgcgagat
     3421 tgcgggtcag gctctcgagc cctgccttcg ccgcggaata cgggaagccg ctgaacgcga
     3481 agttgccgtt gatcgacccg atggtgacta cgctgctccc cggacccgag cggatcaggc
     3541 tgggcagcgc cgcgcggatg gagcgcgcca cgccggtgag gttgagatcg atcttgcggt
     3601 cccacagctc atcgctgatc tcctcgaacg ccggctcatc ccagtcgccg ccggcggcgt
     3661 tgaccagcac gtcgagccgg ccgagccgct cgacggtctc cgcgaacgag gcgtccaccg
     3721 acgtcgcgct ggtcaggtcg caaatggtcg caaaccccgt gccgccgcct gccacgatct
     3781 cggcggcaac accttcggcc gccgcccgat cgatgtcggc cacggcgatc cgtccgcctt
     3841 cgccggcgag ccgcagggc
//
LOCUS       DATAZA010000317         2524 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3052365, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000317 DATAZA010000000
VERSION     DATAZA010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3052365"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..735
                     /locus_tag="VHZ56_08055"
     CDS             <1..735
                     /locus_tag="VHZ56_08055"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020175208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HEX4297963.1"
                     /translation="NINVGILYIFAISSLGVYGIIMGGWASNSKYAFLGALRSAAQMV
                     SYEVSIGFVIITVLLCVGSLNLSDIVVAQNSMGLAHLLGVPWLKVLDWFWLPLFPMFI
                     VFFISALAETNRPPFDLPEAESELVAGFMVEYSSAPYLLFQLGEYIAIQLMCAMTTIL
                     FLGGWAAPIDLPPFTWIPGPIWFILKLCFVFFGFAMVKAFVPRYRYDQLMRIGWKVFL
                     PLSLVAVVVVAGVLEYTGWGWHGGAM"
     gene            735..1223
                     /gene="nuoI"
                     /locus_tag="VHZ56_08060"
     CDS             735..1223
                     /gene="nuoI"
                     /locus_tag="VHZ56_08060"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018064312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HEX4297964.1"
                     /translation="MGVLRVLNSLLLREFVGAFFLSMRYFFSPKKTINYPFEKMPYSP
                     RFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGPRQNDGTRRTVRYDIDMVKC
                     IYCGMCQEACPVDAIVEGPNFEFATETREELYFDKNRLLSNGDRWERELARNIAQDAP
                     YR"
     gene            1230..1838
                     /locus_tag="VHZ56_08065"
     CDS             1230..1838
                     /locus_tag="VHZ56_08065"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEX4297965.1"
                     /translation="MTLALFFFYIFSIITVASALMVIASRNPVHSVLFLILCFVNSAG
                     LFMLAGAEFLALILIVVYVGAVAVLFLFVTMMLDVDFASLRQGMLQYAPVGVVVGLIL
                     LVELLLVGGSYVMAPATTASSVVPIDDTLSNTRALGEVLYTRYVFLFQGAAGVLLVAM
                     VGAIVLTLQHRVNVKRQSVAHQTSRKRSEATELVKVKSGQGV"
     gene            1841..2161
                     /gene="nuoK"
                     /locus_tag="VHZ56_08070"
     CDS             1841..2161
                     /gene="nuoK"
                     /locus_tag="VHZ56_08070"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007007895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEX4297966.1"
                     /translation="MLQAAGIGLGHYLTVGAILFTLGVFGIFLNRKNIIIILMSVELI
                     LLSVNVNFVAFSAQLHDLAGQVFALLILTVAAAEAAIGLAILVIFYRNRGTIAVEDVN
                     KLKG"
     gene            2165..>2524
                     /locus_tag="VHZ56_08075"
     CDS             2165..>2524
                     /locus_tag="VHZ56_08075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEX4297967.1"
                     /translation="MIQAIVFFPLIGALIAGLLGRIIGHRTSEYVTTGLLIIAAILSW
                     IVFAGYWFAPADAAANVQKVEILRWITSGPLDIHWLLRVDTLTAVMLVVVTTVSSLVH
                     VYSIGYMADDPHRARFFA"
BASE COUNT          372 a          805 c          811 g          536 t
ORIGIN      
        1 aacatcaatg tcggcatcct ctacatcttc gcgatcagtt cgctcggcgt ctacggcatc
       61 atcatgggcg gctgggcgtc gaactcgaaa tatgccttcc tcggggcgct gcgctctgcg
      121 gcgcagatgg tgagctacga ggtctcgatc ggcttcgtca tcatcacggt gctgctctgc
      181 gtcggctcgc tcaatctcag cgatatcgtg gtggcccaga actcgatggg tctggcgcac
      241 ctgttgggcg tgccgtggct gaaagtgctc gactggttct ggctgccgct gttcccgatg
      301 ttcatcgtgt tcttcatctc ggcgctggcc gagacgaacc ggccgccctt cgatttgccg
      361 gaagcggagt ccgagctcgt cgccggcttc atggtggagt attcgtcggc gccctatctg
      421 ctgttccagc tcggcgagta catcgccatc cagctgatgt gcgcgatgac gacgatcctg
      481 ttcctcggcg gctgggcggc gccgatcgac ctgccgccgt ttacgtggat ccccgggccg
      541 atctggttca tcctgaaact ctgcttcgtg ttcttcggct ttgcgatggt gaaggcgttc
      601 gtgccgcgct accgctatga ccagctgatg cggatcggct ggaaggtctt cctgccgctg
      661 agcctcgtcg ccgtcgtggt ggtcgccggg gtgctggaat acaccggctg gggctggcac
      721 ggaggagcga tgtgatgggt gttttgcggg tcctcaattc cctcctcctg cgcgagttcg
      781 tcggcgcctt cttcctgtcg atgcgctact tcttctcgcc caagaagacg atcaactatc
      841 cgttcgaaaa gatgccgtac tcgccgcgtt tccggggcga gcacgcgctg cgccgctatc
      901 cgaacggcga agagcgctgc atcgcctgca agctgtgcga ggcgatctgt ccggcgcagg
      961 cgatcaccat cgaagcggga ccgcgccaga acgacggcac gcggcggacc gtccgctacg
     1021 acatcgacat ggtcaaatgc atctattgcg gcatgtgcca ggaggcctgc ccggtcgatg
     1081 cgatcgtcga ggggccgaac ttcgagttcg cgaccgaaac ccgcgaggag ctgtatttcg
     1141 acaagaaccg gctgctttcc aacggcgacc gctgggagcg cgagctggcg cgcaacatcg
     1201 cgcaagacgc gccgtacagg tgacatgaga tgaccctcgc gctgttcttc ttctacatct
     1261 tctcgatcat cacggtcgcc tccgcgctga tggtgatcgc gtcgcgcaat cccgtgcact
     1321 cggtgctgtt cctgatcctg tgcttcgtca attcggcggg gctgttcatg ctggccgggg
     1381 cggagttcct cgcgctgatc ctgatcgtgg tctatgtcgg cgccgtcgcg gtgctgttcc
     1441 tgttcgtcac catgatgctc gacgtcgact tcgcgtcgct gcgccagggc atgctgcaat
     1501 atgcgccggt gggcgtggtg gtcgggctga tcctgctggt ggaactgctg ctcgtcggcg
     1561 gcagctatgt gatggcaccg gcgacgacgg cctcgtcggt ggtgcccatc gacgacacgc
     1621 tgagcaatac gcgggccctc ggcgaggtgc tctacacgcg ctacgtcttc ctgttccagg
     1681 gggcggccgg cgtgctgctg gtggccatgg tcggggcgat cgtgctgacg ctgcagcacc
     1741 gcgtcaacgt caagcggcag agcgtcgcgc accagacctc gcgcaagcgc agcgaggcga
     1801 ccgagctcgt caaggtcaag tcggggcagg gggtctgagc atgttgcaag ccgcgggcat
     1861 cgggctcggc cactacctca ccgtcggggc gatcctgttc acgctgggcg tcttcgggat
     1921 cttcctcaac cgcaagaaca tcatcatcat cctgatgtcg gtcgagctga tcctgctgtc
     1981 ggtcaacgtc aacttcgtgg cgttctcggc gcagctgcac gacctcgccg gccaggtctt
     2041 cgcgctgctc atcctcaccg tcgccgctgc cgaagcggcg atcggcctcg ccatcctcgt
     2101 catcttctac cgcaaccgcg gcacgatcgc ggtcgaagac gtcaacaagc tcaagggcta
     2161 gctcgtgatc caggccatcg tcttcttccc gctgatcggc gcgctgatcg ccgggctcct
     2221 gggccggatc atcggccacc gcacgtccga gtacgtgacg acggggctgc tgatcatcgc
     2281 ggcgatcctg agctggatcg tgtttgccgg ctactggttc gcgccggccg acgcagccgc
     2341 gaacgtgcag aaggtcgaga tcctgcgctg gatcacttcg ggtccgctcg acatccactg
     2401 gctgctgcgg gtcgacacgc tgacggcggt gatgctggtg gtggtgacga cggtctcgag
     2461 cctcgtccac gtctattcga tcggctacat ggccgacgac ccgcaccggg cgcggttctt
     2521 cgcc
//
LOCUS       DATAZA010000318         8191 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_266287, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000318 DATAZA010000000
VERSION     DATAZA010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 8191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8191
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_266287"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1446)
                     /gene="dxs"
                     /locus_tag="VHZ56_08080"
     CDS             complement(<1..1446)
                     /gene="dxs"
                     /locus_tag="VHZ56_08080"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEX4297968.1"
                     /translation="MSERPPTPLLDTIHSPADLKALDRVQLQQVADELRAEVIDAVSV
                     TGGHLGAGLGVVELTVALHAVFNTPEDRLVWDVGHQAYPHKVLTSRRDRIRTLRQKDG
                     LSGFTRRAESPYDPFGAGHSSTSISAGLGMAIASALKGETRNVIAVIGDGAMSAGMAY
                     EAMNNAGAADARLIVILNDNDMSIAPPTGAMSAYLARLVSGPAYRGLRNVAKQLANLL
                     PPFLQEQARKTEEFARGWWTGGTLFEELGFFYVGPIDGHNLDHLLPVLQNVRDAGNGP
                     ILIHVVTKKGKGYEPAESSADKYHGVGKFNVITGAQAKPASNAPSYTAVFADSLVDEA
                     LRDNRIVAVTAAMPSGTGLDKFAEIFPSRCFDVGIAEQHAVTFAAGLASEGMKPFVAI
                     YSTFLQRAYDQVVHDVAVQNLPVRFAIDRAGYVGADGPTHAGNYDSAYLGAIPNLVVM
                     AAADEAELRHMVATAAAHDSGPIAFRYPRGDG"
     gene            complement(1550..3079)
                     /locus_tag="VHZ56_08085"
     CDS             complement(1550..3079)
                     /locus_tag="VHZ56_08085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF882 domain-containing protein"
                     /protein_id="HEX4297969.1"
                     /translation="MHWRLWTLRAIAALAGIMLLVSQSSAPVIAGSDARTLWLYHTHT
                     REEGHFTFYHDGQYDPVVLAQLNLFLADFRTHTETHMDPHLFDLLWEVYQDLHATQPF
                     NIVSAYRSPETNAFLRSTTVGVAEHSQHMLGHAMDVFIPGVPLETLRETALRHQVGGV
                     GYYPTSGEPFVHMDTGGVRAWPRLTRAQLEHVFPDGKTLHIPVDGTPLSNSGYAYAQA
                     QWKVCHMVPCSPDGSVPAPNPTDEIRIAALDPADHQVPTISIEAPTPVLFPVQADAAA
                     DATGPANPDVVVPFSKTPAMMVATADDQTALGAISSVETPALPPHALMPRTDMLTAYA
                     PDIAPDPGAQQALRMIIARETTATAAGNGAAALTPQLDTAGLRLSLGGGTNGLTAVKG
                     IFDLTWNAVTQVNGESAIASTIANPTIDRDPIVGLRQRHVELVAPEIDHVNETLATPL
                     PMTDIHYADMTEPEGYLDNSAELGPYAGRLVLQSDFAAPPRYDRFIIHQPLLVATNLP
                     G"
     gene            complement(3336..5015)
                     /locus_tag="VHZ56_08090"
     CDS             complement(3336..5015)
                     /locus_tag="VHZ56_08090"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX4297970.1"
                     /translation="MRVLMAILLAGVALVGTAVPTLAQDAGGAVVVKTAITKIVIAPP
                     QDDLARIIKAALQLEYNKAVPGSRAYFDAQKLYFFYGSRGFEPIWLSPGPGGAEVFSP
                     NAAKIIDVFKDAKLEGLRPDDYLSPGLDPSAAGTDPAKLAALETAFSGAALKYAQDAY
                     GGRITPTDVDPSMLIAPKRIDAADVLTKLASTDDPGKVLADLDPPHKEFQLLKAALAK
                     EYADDGVKAEQIVIPAGPSLKLGMKDDRVPSLRERLSVPAPEISEGAANATVDTTYDK
                     ALVAAVKAFQQGLGIDADGVLGPATVAALNAGNGVSKDDILANMERWRWEPDDFGEFN
                     VEVNIPEFQVQIVKDGVPVHTTRVVVGEPTNMTPVFSDEIEDIVVNPYWNVPPSIAQK
                     EILPHLIANPGYLDGQNMEMLQGSKVVDASAIDWSTANINNFHIRQKPGGENALGQIK
                     FLFPNDDDIYLHDTPSKSLFSRAYRAYSHGCVRVQNPWDFAAALVATNPDVTEDTLKA
                     LIGDTEKWVQLKHHIPVHLMYFTLRADDDGTIRSYGDVYGENKKLIDLLNA"
     gene            complement(5193..6680)
                     /locus_tag="VHZ56_08095"
     CDS             complement(5193..6680)
                     /locus_tag="VHZ56_08095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX4297971.1"
                     /translation="MMTRILIVDDDPVQLRLTSEVARRAGFAPVTAAGGDEALRRLRA
                     DPGFGAIILDLVMPDRDGMAVMEAMAREQIATPVIVQTAHSSLETVLSAMRQGAADYF
                     VKPVAPERLMVSLRNVIKLGELQAIARTDRSRRAGTLGLADIVTRSPAMHRLLSLCQK
                     AAKSGIPVLIEGEAGTGKELVARVIQGMGERAGKPFVTADCAAIPGDLVDSTLFGHRQ
                     GAVAGAATEQRGKFAEANGGTLFLGEIGELPPDAQGKLLRALQQGEIEPVGGNRVERV
                     NVRLIAATSRRLLGLAQSGEFREDLYYRLNVFPIYVPPLRERIEDIEPLAAHFIARFA
                     AEARKPMAGLSAAALDLLSGYSWPGNIRQLENALYRAIILSDGGYLETSDFPQIVAEA
                     RGREDALRLTAALPAPSAPVHIDAVRPSRQQVAAREAIPDRFVGSDGEVTPLEAVERE
                     LIAFALRRYDGRMSKVARALGIGRSTLYRKLREYGFEDGVESDAA"
     gene            6911..>8191
                     /locus_tag="VHZ56_08100"
     CDS             6911..>8191
                     /locus_tag="VHZ56_08100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEX4297972.1"
                     /translation="MTDPVRAPAAPQQQGHNEFGTLPEWDFTDLYPGAESPELKRDLD
                     WARTEARSFEAEYKGKLDGLAKAGRLYEAVERAERLGDVTGRLSSYSYLRYALDTQNP
                     EKAKFLGDIGQALTDLSTGLLFWELELNRIDDAVIEAAMAMDERLARYRHWFAELRKA
                     KPYQLDDKLEELFHEKSVTGAAAWNRLFDESMAALKFEIDGESLPIEATLHRLSDIDE
                     NKREAAFNALGKTLTDNSRLFTHITNVLAKDKEISDRWRGYKDIADSRHLANSVEREV
                     VDALETAVRAAYPRLSHRYYQMKAKWFGKEQLNAWDRNAPLPTSDERTFDWESAKSTV
                     LEAYGRFSPKLAEVAQPFFAGGWIDAPVRPGKSPGAFAHPTVPSAHPYLMLNYLGKPR
                     DVMTLAHELGHGVHQVLAGPQGSILSNTPLTLAET"
BASE COUNT         1363 a         2511 c         2953 g         1364 t
ORIGIN      
        1 cccgtcccca cgcggatagc ggaaggcgat ggggccggaa tcgtgggccg cagcggtcgc
       61 caccatgtgg cgcagttcgg cctcgtcggc ggcggccatc accaccaggt tggggatggc
      121 cccgaggtag gcgctgtcgt agttcccggc atgcgtggga ccgtcggcac cgacatagcc
      181 ggcgcgatcg atggcgaagc gcaccggcag gttctgcacg gcgacgtcgt gcaccacctg
      241 gtcgtaggcg cgttgcagga aggtcgagta gatggcgacg aacggcttca tgccttcgga
      301 ggcgaggccg gcagcgaaag tgaccgcgtg ctgctcggcg atgccgacat cgaagcaccg
      361 gctgggaaag atttcggcga acttgtcgag cccggtgccc gacggcatcg ccgcggtgac
      421 ggccacgatg cggttgtcgc gaagggcctc gtcgaccagg ctgtcggcga acacggcggt
      481 gtaggacggc gcgttggagg cgggcttggc ctgggcgccg gtgatgacgt tgaacttgcc
      541 gacgccgtgg tatttgtcgg cgctgctctc ggccggctcg tagcccttgc ccttcttggt
      601 gacgacgtgg atgaggatcg gaccgttgcc ggcgtcgcgg acgttctgca gcaccggcag
      661 cagatggtcg agattgtgcc cgtcgatggg gccgacatag aagaagccga gctcctcgaa
      721 cagcgttcca cccgtccacc agccgcgggc gaattcctcg gtcttgcgcg cctgctcctg
      781 gaggaatggc ggcagcaggt tggcgagctg cttggcgacg ttgcggaggc cccgatatgc
      841 agggccggag accagccgcg cgaggtaggc cgacatggcg ccggtgggcg gcgcgatcga
      901 catgtcgttg tcgttgagga tgacgatgag gcgggcatcg gcggcgccgg cgttgttcat
      961 cgcctcatag gccatgccgg cggacatggc gccgtcgccg atgacggcga tgacgttgcg
     1021 ggtctcgccc ttgagggcgg aggcgatggc catgccgagg cccgccgaga tcgaggtcga
     1081 cgaatggccg gcgccaaacg gatcgtaagg gctctcggcg cggcgggtga agccggagag
     1141 gccgtccttc tggcgcaggg tgcggatgcg gtcgcggcgg ctggtcagca ccttgtgcgg
     1201 ataggcctgg tggccgacgt cccagacgag gcgatcctcg ggcgtattga acacggcgtg
     1261 gagggcgacg gtcagctcga cgacgccgag cccggcaccc agatggccgc cggtgacgga
     1321 aacggcatcg atcacctcgg cgcgcaattc gtcggccacc tgctgcagct ggacgcggtc
     1381 cagcgccttg aggtcggccg gcgaatggat ggtgtcgagc agcggtgtcg gcggcctttc
     1441 ggacaagcgc gcggttcctt cgccggcaga tcgatggctg gcattgattt agaaggcgcg
     1501 cgcctgcgat gcaaccggaa ggatcgtgca ggagggtcgc aggacccgct tagcccggca
     1561 agttggtcgc gacgagcagc ggctggtgga tgatgaagcg gtcgtaacgc ggcggcgcgg
     1621 caaaatccga ttgcaggacg aggcggccgg cgtagggacc gagttcggcg gaattgtcga
     1681 gatagccttc cggctccgtc atgtcggcgt aatggatgtc ggtcatcggc agcggcgtcg
     1741 ccagcgtctc gttgacgtga tcgatctcgg gggcgaccag ttcgacgtgg cgctgccgga
     1801 gaccgacgat cggatcgcgg tcgatggtcg gattggcgat ggtcgaggcg atggcgcttt
     1861 ccccgttcac ctgggtgacg gcattccagg tgagatcgaa gatgcccttg acggcggtga
     1921 gcccgttggt gccgccgccc aacgagaggc gcagcccggc ggtgtcgagt tgcggcgtga
     1981 gcgcggccgc gccgttgccg gccgccgtgg cggtggtctc gcgggcgatg atcatgcgga
     2041 gggcctgctg ggccccggga tcgggcgcaa tatcaggggc gtaggcggtc agcatgtcgg
     2101 tccgcggcat caaggcgtgc ggcggcaggg cgggggtctc gaccgacgaa atggcgccga
     2161 gcgcggtctg gtcgtcggcg gtggcgacca tcatcgccgg cgtcttgctg aaggggacca
     2221 ccacgtcggg attggccggg cccgtggcgt cggcagcagc atcggcctgc accgggaaca
     2281 gcaccggcgt gggagcctcg atgctgatgg tcggaacctg gtggtcggcc ggatcgagcg
     2341 cggcaatgcg gatttcgtcg gtcggattcg gcgccggcac gctgccatcg ggcgagcagg
     2401 gcaccatgtg gcatactttc cactgggcct gggcataggc gtagccgctg ttggaaagcg
     2461 gcgtgccgtc caccgggatg tgcagggtct tgccgtccgg gaacacgtgc tcgagctggg
     2521 cgcgggtcag gcgcggccag gcccggacgc cgccggtgtc catgtggacg aagggttcgc
     2581 cggaggtcgg gtagtagccg acgccgccga cctggtggcg cagcgccgtc tcgcgcagcg
     2641 tctcgagcgg gacaccgggg atgaagacgt ccatggcgtg gcccagcatg tgctgggaat
     2701 gctcagcgac gccgacggtg gtggaccgca ggaacgcatt ggtttcgggc gagcgatagg
     2761 ccgaaacgat gttgaagggc tgggtcgcgt gcagatcctg gtagacctcc cagaggaggt
     2821 cgaacaggtg aggatccata tgggtttcgg tgtgggtccg gaagtcggcg aggaacaggt
     2881 tgagctgggc caggaccacc gggtcgtact gaccgtcatg gtagaaggtg aagtggcctt
     2941 cctcacgggt gtgggtgtgg tagagccaga gggtccgggc gtcggagccg gcgatcaccg
     3001 gggcgctgga ctggctgaca agcagcatga tcccggccag cgccgcgatc gcgcgcagag
     3061 tccacagacg ccaatgcaat cgcggtttcc ccgacacgcc ccaagcagcc cgttgaacat
     3121 caagaccggc aggtgccgag actagcgtcc agacgacaag agtctgttaa cgctaacgcc
     3181 cggttatcgc ccggctcgga cgggcactcc cgcgcgcctg tccatcctgc gaagtttcta
     3241 ggcagaaatc gcggctgaac caaggcttat gtcttaaact gcggtaaaca cgagggaaaa
     3301 gcccggcgcg acagttgcgg cgacgggcgt ccggctcagg cgttcagcag gtcgatgagc
     3361 ttcttgttct cgccatagac gtcgccatac gaccggatgg tcccgtcatc atcggcgcgc
     3421 agggtgaagt acatgaggtg caccggaatg tggtgcttga gctgcaccca tttctcggtg
     3481 tcgccgatca aggccttcag cgtgtcctcg gtgacgtccg ggttggtggc gaccagcgcg
     3541 gcagcgaagt cccaggggtt ctgcacgcgc acgcagccat gcgaataggc gcgataggcg
     3601 cgcgagaaca gcgacttgga cggcgtgtcg tgcaggtaga tgtcgtcgtc gttggggaac
     3661 aggaacttga tctgtcccag cgcattctcg ccgcccggct tctggcggat gtggaaattg
     3721 ttgatgttgg ccgtcgacca gtcgatggcc gacgcgtcga ccaccttgga gccctgcagc
     3781 atctccatgt tctggccatc gaggtagccg gggttggcga tgaggtgcgg gaggatttcc
     3841 ttctgcgcga tcgacggcgg cacgttccag tacgggttga cgacgatgtc ctcgatctcg
     3901 tcggagaaca ccggggtcat gttggtgggc tcgccgacca ccacgcgcgt ggtgtggacg
     3961 ggcacgccgt ccttgacgat ctgcacctgg aactcgggaa tgttcacctc gacgttgaac
     4021 tcgccgaagt cgtccggttc ccagcgccag cgctccatgt tggcgaggat gtcgtccttg
     4081 ctgacgccgt tgccggcgtt gagcgcggcg accgtggccg ggccgaggac accgtcggca
     4141 tcgatgccga ggccctgctg gaaggccttg actgccgcca ccagggcctt gtcgtaagtg
     4201 gtgtcgaccg tggcgttggc ggcgccttcc gaaatctccg gcgccgggac gctgaggcgt
     4261 tcgcgcagcg agggcacgcg atcgtccttc atgccgagct tcagcgacgg cccggcgggg
     4321 atgacgatct gctcggcctt gacgccgtca tcggcgtatt ccttggcgag cgctgccttg
     4381 agcagctgga actccttgtg cggcgggtcg agatccgcga gcaccttgcc ggggtcgtcg
     4441 gtcgaggcga gcttggtcag cacgtcggcg gcatcgatcc gcttgggggc gatcagcatg
     4501 ctcggatcga cgtcggtcgg ggtgatgcgg ccgccatagg cgtcctgggc atacttcagg
     4561 gcggcgccgg aaaaggcggt ctccagcgcg gccagcttgg ccgggtcggt gcctgcggcg
     4621 gacgggtcga ggccggggct cagatagtcg tccgggcgca gaccttcgag cttggcgtcc
     4681 ttgaagacgt cgatgatctt ggccgcgttg ggtgaaaaga cttccgcgcc gccggggccg
     4741 gggctcagcc agatcggctc gaaaccgcgc gaaccgtaga agaaatagag cttctgcgcg
     4801 tcgaaatagg cgcgcgagcc gggcaccgcc ttgttgtatt cgagctgcag cgcggccttg
     4861 atgatgcggg ccagatcgtc ctgcggcggg gcgatgacga tcttggtgat cgccgtcttc
     4921 accaccaccg cgccaccggc gtcctgcgcc agcgtcggaa cggcggtgcc cacgagggca
     4981 acgcccgcca gcagaatggc catcaatacg cgcacaccag actccgttat gttcgggtat
     5041 cttggggagg ccgccagggg aatggcgcga gctccggtgc aataccccat gggcttaaac
     5101 tacaagtctt aacgcggaca attcctcacc tttttgtgtt cccgcgatgt gtccttcgtg
     5161 caacgggaac gctgcggttc ctgcgggctg cgctaggccg catcgctctc gacgccatcc
     5221 tcgaaaccat actcccgcag cttgcggtag agcgtcgagc ggccgatccc gagcgcccgg
     5281 gccaccttcg acatgcggcc atcgtaacgg cgaagggcga aggcaatcag ttcccgttcc
     5341 accgcttcga gcggcgttac ctcgccgtcg ctgcccacaa acctgtccgg gattgcctcc
     5401 cgcgccgcta cctgctgacg ggagggtcta acggcgtcga tgtgaaccgg cgctgaaggg
     5461 gccggcaggg ctgccgtcag gcgaagcgcg tcctcgcggc cgcgtgcctc ggcgacgatc
     5521 tgggggaaat ccgaggtttc gaggtagccg ccatcggaga ggatgatggc acggtagagc
     5581 gcgttctcga gttgccggat attgccgggc cagctgtagc cgcttagcag gtcgagcgcc
     5641 gcggcactga ggccagccat cggctttcgc gcctcggcgg cgaagcgcgc gatgaaatgg
     5701 gcggcgagcg gctcgatgtc ttcgatccgt tcgcgcagcg gcggtacgta gatcggaaaa
     5761 acgttcagcc ggtagtaaag gtcctcacgg aattcaccgg actgggcgag gccgagcagc
     5821 cgacgactgg tggcggcgat caaccggacg ttgacgcgct cgacgcggtt gcccccgacc
     5881 ggctcgatct cgccctgctg cagtgcccgc aacagcttgc cctgcgcgtc gggcggcagt
     5941 tcgccgatct cgccgaggaa cagcgtgccg ccattggcct cggcgaattt gccgcgctgc
     6001 tcggtcgcgg cgccggcgac ggcaccctgc cggtggccga acagcgtcga gtcgacgaga
     6061 tcgccgggaa tggcggcgca gtcggcggtc acgaacggct ttccggcgcg ctcgcccatc
     6121 ccctggatga cgcgggcgac gagctctttg ccggtgccgg cctccccctc gatcagcacc
     6181 ggaatgccgg atttcgcggc tttctggcag aggctcagga gccggtgcat cgccggcgac
     6241 cgggtgacga tgtcggcgag gccgagcgtt ccggcgcgtc ggctgcggtc ggtgcgggcg
     6301 atagcctgca gttcgccgag cttgatgacg ttgcgcagcg agaccatcag gcgctcgggg
     6361 gcgacgggct tgacgaaata gtcggcggcg ccctggcgca tcgccgaaag aacggtttcg
     6421 agcgaggaat gggcggtctg gacgatcacc ggcgtagcga tctgctcgcg tgccatggct
     6481 tccatgacgg ccatgccatc gcggtcgggc attaccaggt cgaggataat tgcgccaaag
     6541 ccggggtcgg cgcggagccg ccgcagggcc tcgtccccgc cggcggcggt caccggggcg
     6601 aatccggcgc ggcgggcgac ctcggacgtc aggcgcagct gcaccggatc gtcatcgacg
     6661 atgagaatgc gggtcatgat cctccggaaa ggcccggcgt cgccgccgaa tcgcggttgt
     6721 gccgtttcga tgcaggatgc aaagaggcgg ttaagagccc attaagtctc gcagaatcgc
     6781 ggtcgacagg tgcgatcatg caagcgcacg cggaaaccgc gtgcccgcgg caaatctcgc
     6841 ccttgagaac gatttcactg atggatatgg tcccggcgca aaattccgga cagacgaaag
     6901 tcgcagccgc atgaccgatc ccgttcgcgc tcccgccgct ccacagcaac aggggcacaa
     6961 cgagttcggg acgctgccgg agtgggattt caccgatctt tacccgggcg ccgagtcgcc
     7021 tgagctgaag cgcgatctcg actgggcccg gaccgaggcc aggtcgttcg aggcggagta
     7081 caagggcaag ctcgacgggc tggccaaggc cgggcggctc tacgaggcgg tcgagcgggc
     7141 ggaaaggctc ggcgatgtga ccggccggct gtcgtcatat tcgtatctgc gctacgcgct
     7201 cgacacgcag aatcccgaaa aggcgaagtt cctcggcgat atcggccagg cgctgaccga
     7261 cctctcgacc gggctgctgt tctgggaact cgagctgaac cggatcgacg acgccgtgat
     7321 cgaggcggcg atggcgatgg acgagcggct ggcccgctac cgccactggt tcgccgagct
     7381 gcgcaaggcc aagccgtatc agctcgatga caagctcgag gagctgttcc acgagaaatc
     7441 ggtcaccggc gcggccgcgt ggaaccggct gttcgacgaa tccatggctg ccctgaagtt
     7501 cgagatcgac ggcgaaagcc tgccgatcga ggcgacgctg caccggcttt cggacatcga
     7561 cgagaacaag cgcgaggccg ccttcaacgc tctcggcaag acgctcaccg acaattcccg
     7621 gctgttcacg cacatcacca atgtcctcgc caaggacaag gaaatctccg accgctggcg
     7681 cggctacaag gacatcgccg acagccggca ccttgccaat tcggtcgagc gcgaggtggt
     7741 ggatgcgctc gagacggcgg tgcgcgccgc ctatccgcgc ctcagccacc gatactacca
     7801 gatgaaggcg aagtggttcg gcaaggagca gctcaacgcc tgggaccgca acgcaccgtt
     7861 gccgaccagc gacgagcgca cgttcgactg ggaaagcgcc aagtccaccg tgctcgaagc
     7921 ctacggccgg ttctcgccga aactggccga ggtggcgcaa ccgttctttg ccggcggctg
     7981 gatcgacgcg ccggtgcggc cgggcaaatc gcccggggcc ttcgcgcacc cgacggtgcc
     8041 gtcggcgcat ccgtatctga tgctcaacta tctgggcaaa ccgcgcgacg tgatgacgct
     8101 ggcgcacgaa ctggggcacg gcgtccacca ggttctggcc ggtccgcagg gctcgatcct
     8161 cagcaacacg ccgctgaccc tggccgagac c
//
LOCUS       DATAZA010000319         8492 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_730212, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000319 DATAZA010000000
VERSION     DATAZA010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 8492)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8492)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8492
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_730212"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..472
                     /locus_tag="VHZ56_08105"
     CDS             <1..472
                     /locus_tag="VHZ56_08105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019172438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="adenine deaminase C-terminal domain-containing
                     protein"
                     /protein_id="HEX4297973.1"
                     /translation="DRGQDVAQVAVVERHKGTGRVVNGFVSGFGYTADCAVAATVAHD
                     SHHMIVVGTNRDDMAKAANRLQEVGGGFVVISRGVELALVELPIAGMMSDERAEIVAA
                     KAENVRLAMVACGCTINNALIQHMFVALPVIPELRLTDMGLVDVTRFALTSLFV"
     gene            complement(453..620)
                     /locus_tag="VHZ56_08110"
     CDS             complement(453..620)
                     /locus_tag="VHZ56_08110"
                     /inference="COORDINATES: protein motif:HMM:NF018294.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1127 domain-containing protein"
                     /protein_id="HEX4297974.1"
                     /translation="MFDRLRERLADWQIYRETIRQLHRLDPHLLADAGIDPRTAKARA
                     WAAARARRRGL"
     gene            746..1618
                     /locus_tag="VHZ56_08115"
     CDS             746..1618
                     /locus_tag="VHZ56_08115"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX4297975.1"
                     /translation="MNIDWADLRLFLDVARLGGLSAATTTTGLSAATLGRRVTALEKQ
                     VGEALFVRSHSGYALTRAGDELLRRAEDVEAAMTSLSRWRDGTLGERVVRISAGTWTT
                     EFFARHIGELWNVGDPFRLEFVTAYEKIDIGRRNADIGMRNERPAEPNLAGRLVGRMA
                     HALYAGRQLVNGVEAGRFVGLTGDGANLASTRWLMAHHGDRIGLRGNDSHNVRELVAA
                     GAGLTVLPCFAGDSDKRLVRVAAPIPELLQEQWLVTHQDERHAREVRLVIERLVALLK
                     AHAPLFAGALGNPP"
     gene            1683..2231
                     /locus_tag="VHZ56_08120"
     CDS             1683..2231
                     /locus_tag="VHZ56_08120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297976.1"
                     /translation="MNAAAFVVGPRDGAGAALEELARGLGFAPVGRYAGLAQAEAQAA
                     ETPLLFFLCAEVRDVGTLKPVADAIRFSGNLNVKFSPLIYVARDLSVEGIKLCIRMGF
                     DDVIALPYAGGLAERIGRQVGQPQVYYETASYFGPDRRNRVGESRSTESDHGGGQYRR
                     IEIVRHPRTGVDVVHDDFQVVL"
     gene            2312..3493
                     /locus_tag="VHZ56_08125"
     CDS             2312..3493
                     /locus_tag="VHZ56_08125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006205958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4297977.1"
                     /translation="MKLGLSLAPQHRVFAAFALYAFSMGNLFPRLPDIQRAMGVEEGA
                     LGLGLIGTPVGTLLALTFAAPLLERIGFRRALLGAIPLLAVLYAIAVEAPGPLSFFFL
                     LIPVGLAIGCIEMMVNTEADRTEHAVGFRIMNRAHAFWSIGFFAAGLFGAWMAQLGIS
                     PQLHLGLVIPISLVGVVVLLGGYQPSPHRAGGSTEAAPRFAAPTTAILVLVAVTLCSM
                     LMEGASMDWSAIYMHSVFAAGPFLSGVAVAAFAFSQATMRFFADGFVERHSPMGVARV
                     LLGILLAAVLVVFFSPWPILSLVGFAGMGVGTSAIFPLAMSAAAQRTDRPAVINVAAL
                     AQTSFVVFLLGPPLLGGIAQSLGLRWSFGIGLPLIVLSFAMAGSLGRRPVARDLAAPA
                     Q"
     gene            3490..3969
                     /locus_tag="VHZ56_08130"
     CDS             3490..3969
                     /locus_tag="VHZ56_08130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011994935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcB family DNA repair protein"
                     /protein_id="HEX4297978.1"
                     /translation="MSETGLPQIVDLRQSPTALKVQRGVMRLLRSVHDFCCYAEVPLS
                     NGRRADVLGVGPKGEIWIVEIKSSLIDYRVDAKWPEYKDYCDRFYFAKPPELDAAIFP
                     AGEGLIAADGHGAEILRPAVETPLAAARRRALLLRLVRLGADRVHQLMDPQAGGEAG"
     gene            3969..5111
                     /locus_tag="VHZ56_08135"
     CDS             3969..5111
                     /locus_tag="VHZ56_08135"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4297979.1"
                     /translation="MMLSRVARIRAVFFLHAIASGGLYPRLPAIAQRLGLDVASLGLV
                     LAGFTLGTMATFFFVSRIVESQGPKRILVACLTVLPLATALLAAMPSGPALFGWFAIY
                     GVIYSLPNAAMNIEADRVEAATGQRVMNSCHGLWSIGYLAATLIGTLAEGTHISPLMH
                     LGLLAVPLVPIALWTTLGMEPAPPRPHAAQTVRRLALPTLPILLLVAYSIGPNLLEGG
                     LRNWSVLYMRDSFSAPSWVDTLTLPVFLVSQAIGRLSADRWVTRFGVVATGRVLTLLA
                     LIGCAAVVLAPNLYVALAGFLVIGVGVCTTYPLTTSAAARIGDRPSSQNVASLTFANQ
                     LVQFAAPPTLGGLASLLGIRIVFGAALPLLVASLGLARALAPKRGP"
     gene            5113..6135
                     /locus_tag="VHZ56_08140"
     CDS             5113..6135
                     /locus_tag="VHZ56_08140"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4297980.1"
                     /translation="MPKRTFELIRTDEGFFGLEADWNGLWESLPAPSPYLSHDWVAMC
                     WRFAGLRRPASRRIAIVREDGELAAVLPLTARRRYGLLREYRPLTSLMPQYTDALLRN
                     DADAAARAACLLHGLAPGLGVSRLVLGHVPDDSALLPALRGARRHHWGDTVGADLSAG
                     FDGYLARLDPALRSDHRRRLRLLRAAGGYELRLSDRSTIDADFNWLLAQKRRWEPPRG
                     KRRRWVDDLASENSLREFSHRWLDKGRLWLAMLSLGDAPIASSLYFAGGSTLWAFMIT
                     LDPAHKRFAPGRTLQLMTMERAAAAGFACVDFMWRRVPDWRDRLKTTEAPIQSVRAFL
                     RPGETS"
     gene            6138..7148
                     /locus_tag="VHZ56_08145"
     CDS             6138..7148
                     /locus_tag="VHZ56_08145"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4297981.1"
                     /translation="MARAPGFELIRSDAAFEALEPDWRALFERAGRPSPFLDFDWVRM
                     TWQRVALEGPPAQLAIVRRDGRLALGLLLQQMPYRGLFQRYHGALTELPAFTEPLVAA
                     EDVAGLTAELLRGLGGQWLTFSLVLARLRDDAPVRQALAPRIRSEMTLGMAPMVDISG
                     GFDGYYNAFSGGTRNQLSRKRRKLAAGGAVVLRLATEDSFDADFDWLLEHKRSWSPPD
                     GGPLRAWVTEAGSEDDLRHIGKRWIADGRMVLGTLDSGDRRVAGGMVLVAGAEATYYV
                     LTYDPAFAYYSPGRLLTLQLIEHVAGLGVERFDFMRGDQQWKDRLKNAVRGVRRIRVA
                     LG"
     gene            complement(7145..8116)
                     /locus_tag="VHZ56_08150"
     CDS             complement(7145..8116)
                     /locus_tag="VHZ56_08150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297982.1"
                     /translation="MLIFIGPRRQTHVLRTMQRDARMPAWTTRTYTWLYRTSRLPAGT
                     YIFVGIDRLDAGERRLAGQFYRHINGLGAGFRALNDPARAMGRYRLLRTLHEHGINDF
                     NAYLVADSARPERYPVFIRRNGTSTTPLTELLQTRTELDAEIDRLVAAGEFDEDLIII
                     EFCNEPQQGGVYHKQAEYRVGDRYVANATQHSSNWYVKRVTRTDVPDALYHRDAEIVE
                     TNPYAEPLRKVFELAHIEYGRADFGFANGRPQVFEVNFNPDITTQQERPRPNPLDRAN
                     WDRSDTLMFEAMQAISGAATGSAPTLHTGELREFRLRFWRNYAPQRY"
     gene            complement(8119..>8492)
                     /locus_tag="VHZ56_08155"
     CDS             complement(8119..>8492)
                     /locus_tag="VHZ56_08155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4297983.1"
                     /translation="GEDEERHALRDALVASGIAGDQVILPLLDDRVDLKAGGVQAMTP
                     PPARRIDMNQLNADWYNAYSSFVLDLSNRLKTASTDAERLRLMAELKDKLGVPPVVPV
                     PTPVTPVAATGTILHGEPGGE"
BASE COUNT         1133 a         2782 c         3123 g         1454 t
ORIGIN      
        1 cgaccgcggg caggacgtgg cgcaggtggc ggtggtcgag cgccacaagg gcaccgggcg
       61 ggtggtcaac ggcttcgtct cggggttcgg ctacaccgcc gactgcgcgg tggcggcgac
      121 ggtggcgcat gacagccacc acatgatcgt ggtcggcacc aaccgcgacg acatggcgaa
      181 ggccgccaac cggctgcagg aggtgggcgg cggcttcgtc gtgatcagcc ggggcgtcga
      241 gctggcgctg gtcgagctgc cgatcgccgg gatgatgtcg gacgagcggg ccgagatcgt
      301 cgcggcgaag gccgagaacg tgcggctggc gatggtggcc tgcggctgca ccatcaacaa
      361 tgcactgatc cagcacatgt tcgtcgcgct gccggtgatc ccggagctca ggctcaccga
      421 catggggctg gtggacgtca cccgcttcgc gctcacaagc ctcttcgtct agcccgcgcg
      481 gcggcccagg cgcgcgcctt ggcggtgcgc ggatcgatgc ccgcgtcggc cagcagatgg
      541 gggtcgagcc ggtgcagttg ccggatggtc tcgcggtaga tttgccaatc ggccaggcgc
      601 tcgcgcaagc ggtcgaacat gctgatctcc tatcgtccag aattgaaacg tcgcgatatc
      661 tttcggacgt atcgacacac ggatattgcc gtgatgcgcc ctggcctggt acagacgtga
      721 tcgagacggg ctttgcagaa atgaaatgaa catcgactgg gcggatctgc ggctgttcct
      781 cgacgtggca cggctgggcg gcttgagtgc cgccaccacg accaccggac tgagcgcggc
      841 gacgcttggc cggcgggtca cggcgctcga aaagcaggtc ggcgaggcgc tgttcgtgcg
      901 ctcgcacagc ggctacgcgc tcacccgggc cggcgacgag ctgctgcggc gcgccgaaga
      961 tgtcgaggcg gcgatgacct cgctcagccg ctggcgcgac ggcacgctgg gcgagcgcgt
     1021 ggtgcgcatc tcggcaggca cctggacgac ggagtttttc gcccggcaca tcggcgagct
     1081 gtggaacgtc ggcgatccgt tccggctcga gttcgtcacc gcctacgaga agatcgacat
     1141 cggccggcgc aatgccgaca tcggcatgcg caacgagcgg ccggccgagc cgaacctggc
     1201 gggccggctg gtcgggcgga tggcgcatgc gctctacgcc gggcgacagc tcgtcaacgg
     1261 cgttgaagcg ggtcgcttcg tcggcctcac cggcgatggg gcaaaccttg cgagcacgcg
     1321 ctggctgatg gcccaccatg gcgaccgcat cgggctgagg ggcaacgaca gccacaacgt
     1381 acgcgagctg gtcgccgccg gtgccggcct gacggtgctt ccctgctttg ccggcgacag
     1441 cgacaagcgg ctggtgcggg tggcggcgcc gatccccgag ctgctgcagg agcaatggct
     1501 ggtgacccac caggacgaac ggcacgcccg cgaggtgcgg ctggtgatcg agcggctggt
     1561 ggcgctgctg aaggcgcatg cgccgctgtt tgcgggggcg ctgggcaatc ccccttaacc
     1621 ggttcttcag cgcgggcgtg gaacagtcgg ggccagacat gcatgtggtc gggggactat
     1681 cggtgaacgc cgcagccttc gtggtgggcc cccgcgacgg ggccggcgcc gcgctcgaag
     1741 agctggcgcg gggtctcggc tttgccccgg tcgggcgcta tgcgggcctg gcccaggccg
     1801 aggcgcaggc ggccgagacg ccgctgctgt ttttcctctg tgcggaagtc cgcgacgtcg
     1861 ggacactgaa gccggtcgcc gacgccatcc gcttttccgg caatctcaac gtcaagttct
     1921 cgccgctgat ctatgtcgcc cgcgacctgt cggtcgaagg catcaagctg tgcatccgca
     1981 tgggcttcga cgacgtcatc gcgctgccct atgccggggg cctggcggaa cgcatcggcc
     2041 ggcaggtcgg gcagccgcag gtgtattacg agacagcctc gtatttcggg ccggatcgcc
     2101 gcaaccgcgt cggggaatcc cgctcgaccg agagcgatca tggcggcggg caataccggc
     2161 gcatcgagat cgtccggcat ccgcgcaccg gcgtcgacgt ggtccacgac gacttccagg
     2221 tcgtgctcta gcccggcccg gccggccgag ggttgtttca tcggcgcagg ccgattaatg
     2281 ctcggccgaa catctatcgg caggctttcc gatgaaactt ggactttcgc tcgccccgca
     2341 gcaccgggtc tttgcggcat tcgcgctcta cgccttctcg atgggcaatc tgtttccgcg
     2401 gctgcccgac atccagcgcg ccatgggcgt cgaggagggg gcgctggggc tcgggctcat
     2461 cggcacgccg gtgggcacgc tgctggccct caccttcgcg gcgccgctgc tcgagcggat
     2521 cggcttccgg cgggccctgc tcggcgccat tccgctgctg gcggtgctct acgccatcgc
     2581 cgtcgaggcc cctggcccgc tcagcttctt cttcctgctg atcccggtcg ggctggccat
     2641 cggctgcatc gagatgatgg tcaacaccga ggccgaccgc accgaacacg cggtgggctt
     2701 tcgcatcatg aaccgggcgc acgcgttctg gagcatcggc ttcttcgcgg ccgggctgtt
     2761 cggcgcatgg atggcgcagc tggggatttc gccacagctg cacctcggcc tggtgatccc
     2821 gatctcgctg gttggagtgg tggtgctgct gggcggctac cagccgtcgc cgcaccgcgc
     2881 cggaggcagc accgaggctg cgccgcgctt tgccgccccg accaccgcca tcctggtgct
     2941 ggtggcggtg acgctctgct cgatgctgat ggaaggcgcc agcatggact ggtcggcgat
     3001 ctacatgcac agcgtgttcg cggcgggtcc gttcctgtcg ggcgtggcgg tggcggcgtt
     3061 cgccttcagc caggcgacga tgcggttctt cgccgacggc ttcgtggaac ggcattcgcc
     3121 gatgggcgtg gcgcgggtgc tgctcggcat cctgctggcc gccgtgctgg tggtgttctt
     3181 ctcgccgtgg ccgatcctgt cgctcgtcgg ctttgccggc atgggggtgg gtaccagcgc
     3241 catcttcccg ctggcgatgt cggcggcggc gcagcgcacc gaccggccgg cggtgatcaa
     3301 cgtggcggcg ctggcgcaga cgtcgttcgt ggtgttcctg ctcggcccgc cgctcctcgg
     3361 cggcatcgcg cagagcctcg gcctgcgctg gtcgttcggc atcgggctgc cgctgatcgt
     3421 cctgagcttt gccatggccg gctcgctcgg ccgccggccg gtggcccggg acctcgccgc
     3481 gccggcgcaa tgagcgaaac cgggctgccg cagatcgtcg atctgaggca gtcgccgacg
     3541 gcgctaaagg tgcagcgcgg ggtgatgcgg ctgctgcgct cggtgcacga tttctgctgc
     3601 tatgccgagg tgccgctgag caacggccgg cgcgccgacg tgctcggcgt cgggccgaag
     3661 ggcgagatct ggatcgtcga gatcaagtcg agcctcatcg actaccgggt cgacgccaaa
     3721 tggcccgagt acaaggacta ttgcgaccgc ttctacttcg ccaagccgcc cgagctcgac
     3781 gccgccatct tcccggcagg cgagggactg atcgccgccg acgggcacgg cgccgagatt
     3841 ctccgcccgg cggtggaaac gccgctcgcc gcggcccgac gccgggcgct gctgctgcgg
     3901 ctggtgcggc tgggggccga ccgcgtgcac cagctgatgg acccgcaggc cgggggcgag
     3961 gccggctgat gatgctctcg cgggtcgcgc gcatcagggc ggtgttcttc cttcacgcca
     4021 tcgcctcggg cggcctctat ccgcgcctgc cggcgatcgc gcagcgactc ggcctcgacg
     4081 tggcgtcgct tggcctggtg cttgccggct tcacgctcgg caccatggcg acgttctttt
     4141 tcgtcagccg catcgtcgag agccagggac cgaagcgcat cctcgtcgcc tgcctgacgg
     4201 tgctgccgct ggcgacggcg ctgctggccg cgatgccgtc cggtccggcg ctgttcggct
     4261 ggttcgcgat ctacggcgtc atctattcgc tgccgaacgc cgccatgaac atcgaggccg
     4321 accgcgtcga ggcggccacc gggcagcggg tgatgaattc gtgccacggg ctgtggagca
     4381 tcggctatct cgcggccacg ctgatcggca cgctcgccga gggcacccat atttcgccgc
     4441 tgatgcacct ggggctgctg gcggttccgc tggtgcccat cgcgctgtgg acgacgctgg
     4501 ggatggagcc cgcaccgccg cgcccgcacg cggcgcagac ggtccggcgc ctggcgctgc
     4561 cgacactgcc gatcctgctg ctggtggcct attcgatcgg gcccaacctg ctcgagggtg
     4621 gcctgcgcaa ctggtcggtg ctgtatatgc gcgacagttt ttcggcgccc agctgggtcg
     4681 acacgctgac gttgccggtg ttcctcgtgt cgcaggcgat cggccggctc agcgccgacc
     4741 gctgggtgac gcggttcggc gtggtggcga cgggccgcgt cctgacgctg ctggcactga
     4801 tcggctgtgc ggcggtggtg ctcgcaccca acctctacgt ggcgctggcc gggttcctgg
     4861 tcatcggcgt cggggtgtgc acgacctatc cgctgaccac ctcggcggcg gcgcggatcg
     4921 gcgaccggcc gtcgtcgcag aacgtcgctt cgctgacctt cgccaaccag ctggtgcagt
     4981 tcgccgcgcc cccgaccctg ggggggctgg cctcgctgct gggcatccgc atcgtcttcg
     5041 gcgcggccct gccgctgctc gtcgcctcgc tggggctggc ccgagcgctg gcgccgaaac
     5101 gggggccgtg acatgccgaa gcgcacattc gagctgatcc gcacggacga gggctttttc
     5161 ggcctcgaag ccgactggaa cggcctgtgg gagtcgctgc cggcgccctc gccgtacctg
     5221 agccatgact gggtggcgat gtgctggcgc ttcgccgggt tgcgccggcc agcgagtcgc
     5281 cgcatcgcca tcgtgcgcga ggacggggag ctggcggccg tgctgccgct gacggcacgg
     5341 cgtcgatatg ggctgttgcg cgaataccgc ccactcacct cgctgatgcc gcagtacacc
     5401 gacgcgctgt tgcgcaacga tgcggacgcg gcggcgcggg cggcctgtct gttgcacgga
     5461 ctggcgccgg ggctgggcgt cagccgcctg gtgctcggcc atgttccgga tgattcggcg
     5521 ctgctgccgg cactcagagg cgcccggcgg caccactggg gggacactgt cggggccgat
     5581 ctgagcgccg gtttcgatgg ctacctggcg cggctcgatc cggcgctccg atcggaccac
     5641 cggcgccggc tgcggctgct gcgcgcggcc gggggatacg aactccggct gtccgaccgc
     5701 tcgacgatcg atgcagattt caactggctg ctggcgcaga agcgccgctg ggagccgccg
     5761 cgcggaaagc gcaggcggtg ggtggatgat ctcgccagcg agaacagctt gcgcgaattt
     5821 tcgcatcgct ggctcgacaa gggccggctg tggctcgcca tgctcagcct gggagacgcc
     5881 ccgatcgcgt catccttgta tttcgccggc ggatcgacac tctgggcctt catgatcacc
     5941 ctcgatcccg cccacaagcg ctttgccccg ggccgcaccc tgcagctgat gacgatggag
     6001 cgcgcggcgg cggccggctt tgcatgcgtc gatttcatgt ggcgcagggt ccctgactgg
     6061 agggatcggc tgaaaacgac cgaggcgccg atccagtcgg tgcgggcgtt tctgcgtccg
     6121 ggggaaacgt cgtagcgatg gcgcgggcgc ccggattcga gctgatccgc agcgacgctg
     6181 cgttcgaggc gctcgagcct gactggcggg cgctgttcga gcgggccgga cgaccgtcgc
     6241 ccttcctcga tttcgactgg gtacggatga cctggcagcg cgtggcgctg gagggaccgc
     6301 cggcgcaact ggcgatcgtg cggcgcgacg gccggctggc cctgggcctt ttgctgcaac
     6361 agatgccgta ccgcgggctg ttccagcgct accatggcgc cctcacggag ctgcccgcct
     6421 tcaccgagcc gctggttgcg gccgaggacg ttgcggggct cacggcggag ttgctgcggg
     6481 ggctcggcgg tcagtggctc accttctcgc tggtgctcgc ccggctgcgc gacgacgcgc
     6541 cggttcggca agcgctggcg ccgcggatcc gctccgagat gacgctcggg atggcgccga
     6601 tggtcgacat ttccggcggg ttcgatggct actacaacgc cttctcgggc ggcacgcgca
     6661 accagctgag ccgcaagcgc cgaaagctcg ccgcgggggg tgccgtggtg ctgcggctgg
     6721 cgacggaaga cagcttcgat gccgatttcg actggctgct cgagcacaag cgcagctggt
     6781 cgccgccgga cggaggaccg ctgcgggcgt gggtcaccga ggccggcagc gaggacgatc
     6841 tgcggcacat cggcaagcgg tggatcgcgg acgggcgcat ggtgctcggc acgctcgatt
     6901 ccggcgaccg gcgggtggcg ggcggaatgg tgctcgtcgc cggcgcagaa gcgacctact
     6961 acgtgctcac ctacgatccg gcgttcgcct attattcgcc gggccgcctg ctgacgctgc
     7021 aactgatcga gcacgtcgcc gggctcgggg tcgagcggtt cgacttcatg cgcggcgacc
     7081 agcagtggaa agaccggctg aagaatgccg ttcgcggcgt gcggcgcatc cgcgtggcgc
     7141 tgggctagta gcgctgcggg gcgtaattgc gccagaagcg caggcggaat tcgcgcagct
     7201 cgccggtatg cagggtcggg gcgctgccgg tcgcggcgcc gctgatcgcc tgcatcgcct
     7261 cgaacatcag cgtgtccgag cggtcccagt tggcgcggtc gagcggattg ggccgcggcc
     7321 gctcctgctg ggtggtgatg tcgggattga agttgacctc gaacacctgc ggccggccgt
     7381 tggcgaagcc gaaatcggcg cggccatatt cgatgtgggc gagctcgaac acctttcgca
     7441 ggggttcggc gtagggattg gtctcgacga tttcggcgtc gcgatggtag agcgcgtcgg
     7501 gcacgtcggt gcgggtgacg cgcttcacgt accagttgga gctgtgctgg gtggcgttgg
     7561 cgacgtagcg atcgccgaca cggtactcgg cctgcttgtg atagacgccc ccctgctgcg
     7621 gctcgttgca gaactcgatg atgatgaggt cttcgtcgaa ttcgccggcg gcgaccagcc
     7681 ggtcgatttc ggcgtcgagc tcggtgcggg tctgcagcag ttcggtgagc ggcgtggtgc
     7741 tcgtgccgtt gcggcggatg aacaccgggt agcgctccgg ccgcgccgaa tcggccacga
     7801 gatacgcatt gaagtcgttg atgccatgct cgtggagggt ccgcagcagc cggtagcggc
     7861 ccatggcgcg ggccggatcg ttgagggcgc ggaacccagc ccccaggccg ttgatatgac
     7921 ggtagaactg cccggccagg cggcgctcgc cagcatcgag ccggtcgatg ccgacgaaga
     7981 tataggtgcc ggccggcagc cgcgaagtgc ggtagagcca ggtgtaggtg cgggtggtcc
     8041 aggccggcat ccgggcgtcg cgctgcatgg tgcgcagcac gtgggtctgg cgccgcggcc
     8101 cgatgaagat cagcatggct attccccgcc cggctccccg tggaggatcg ttccagtcgc
     8161 cgcaaccggg gtcaccggcg tcggcaccgg cacgaccggg ggaacgccga gcttgtcctt
     8221 gagttcggcc atcaggcgca ggcgctcggc gtcggtactg gcggtcttca gccggttgga
     8281 caggtcgagc acgaagctcg aataggcgtt gtaccagtcg gcgttgagct ggttcatgtc
     8341 gatgcgccgc gcgggcggcg gcgtcatcgc ctgcacgccg ccggccttga ggtcgacgcg
     8401 gtcgtcgagc agcggcagga tgacctggtc gccggcgatg ccggaggcga cgagcgcgtc
     8461 gcgcagcgcg tggcgttcct cgtcctcgcc gt
//
LOCUS       DATAZA010000320         1599 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_846769, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000320 DATAZA010000000
VERSION     DATAZA010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_846769"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..354
                     /locus_tag="VHZ56_08160"
     CDS             <1..354
                     /locus_tag="VHZ56_08160"
                     /inference="COORDINATES: protein motif:HMM:NF018482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HEX4297984.1"
                     /translation="MSKPTDVAPSPDGYTQGYLYLTHRPAENVNNEINVVAGFDFAPD
                     QPATLTVDGKSFALFTQKDSGWLADATQNDALAGALRAGQTVVIQGTADKGVLVSETF
                     SLAGATAASKAISSC"
     gene            431..>1599
                     /gene="rlmN"
                     /locus_tag="VHZ56_08165"
     CDS             431..>1599
                     /gene="rlmN"
                     /locus_tag="VHZ56_08165"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEX4297985.1"
                     /translation="MSIALNLDHVSPPARPEAPRRASLVGLTKPQMRAALAAVGLDER
                     EAKMRASQIWNWIYVNGVTDFERMSNIQKPVRQALGEHFLLDRPEIVSEQLSVDGTRK
                     WLFRFRDPKNPRLPPVEVETVYIPESGRGTLCVSSQVGCTLSCSFCHTGTQTLVRNLG
                     AGEILGQVLMARERLGDFPGGVRPDDGGLVPAPRGSGGSAGDSRAITNVVMMGMGEPL
                     YNYDNVRDALLIASAEDGISLSKRRITLSTSGVVPQIEPWGREVGTMLAISLHAVRDD
                     LRDMLVPINKKWPLKELLAAVRAYPQLSNARRVTFEYVMLRDINDSDADARELVRLLS
                     GIPAKINLIPFNPWPGTNYDCSSSARIEKFADIVNHAGYASPVRTPRGRDISAACG"
BASE COUNT          261 a          553 c          543 g          242 t
ORIGIN      
        1 atgagcaagc cgaccgacgt ggcgccctcg cccgatggct acacgcaggg ctacctctac
       61 ctcacgcacc ggccggccga gaacgtcaac aacgagatca acgtcgtcgc cggtttcgac
      121 ttcgccccgg accagccggc gacgctgacg gtcgacggca agagctttgc gctgttcacg
      181 cagaaggatt cgggctggct ggcggacgcg acgcagaacg atgcgcttgc cggggcgctg
      241 cgggccggcc agacggtggt catccagggc accgccgaca agggcgtgct ggtcagcgag
      301 accttctcgc tcgccggggc gacggccgcc tccaaggcga tcagcagctg ctgaggctgc
      361 cccggccttc tttgcgccgg ccgccgcact atgttagagc gcgcccaacc cgcatagccc
      421 tccgaccgtc atgagcatcg ccctcaacct cgaccatgtg agcccgccgg cgcgccccga
      481 agcgccgcgg cgcgcgtcgc tggtcgggct cacgaagccg cagatgcggg cggcgctggc
      541 cgccgtgggg ctcgacgagc gcgaggcgaa gatgcgcgcc tcgcagatct ggaactggat
      601 ctacgtcaac ggcgtcaccg atttcgagcg gatgagcaac atccagaagc cggtgcggca
      661 ggcgctgggc gagcacttcc tgctcgaccg gccggagatc gtctccgagc agctgtcggt
      721 cgacggcacg cgcaaatggc tgttccgctt ccgcgacccg aagaacccgc ggctgccgcc
      781 ggtcgaggtc gagacggtgt acatccccga atccggtcgc ggcacgctgt gcgtgagctc
      841 gcaggtgggc tgcaccctca gctgctcgtt ctgccacacc ggcacgcaga cgctggtgcg
      901 caatctcggc gccggggaaa tcctcgggca ggtgctgatg gcgcgcgagc ggctgggcga
      961 ttttcccggc ggcgtgcgtc ccgacgatgg cgggctggtg ccggcgccgc gcggctccgg
     1021 cggctcggcc ggcgacagcc gggcgatcac caatgtggtg atgatgggca tgggcgagcc
     1081 gctctacaat tacgacaatg tccgcgacgc gctgctgatc gcctcggccg aggacggcat
     1141 ctcgctgagc aagcggcgga tcacgctgtc gacctcgggc gtggtgccgc agatcgagcc
     1201 atggggccgc gaggtcggca ccatgctggc gatctcgctc cacgcagtgc gcgacgatct
     1261 gcgcgacatg ctggtgccga tcaacaagaa atggccgctc aaggagctgc tggcggcggt
     1321 gcgcgcctat ccgcagctca gcaacgcccg gcgcgtcacc ttcgaatatg tgatgctgcg
     1381 cgacatcaac gattccgacg ccgatgcgcg cgaactggtg cggttgttga gcggcattcc
     1441 agccaagatc aacctgatcc cgttcaatcc ctggccgggc accaattacg actgctcgag
     1501 ctcggcccgg atcgagaaat tcgccgacat cgtcaaccac gccggctacg cctcgccggt
     1561 gcgtacgccg cgcggtcgcg acatctccgc cgcctgcgg
//
LOCUS       DATAZA010000321         2429 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3169177, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000321 DATAZA010000000
VERSION     DATAZA010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2429
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3169177"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..705)
                     /locus_tag="VHZ56_08170"
     CDS             complement(<1..705)
                     /locus_tag="VHZ56_08170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotA"
                     /protein_id="HEX4297986.1"
                     /translation="MSRPTSQLLWMIVGLLAAGFVAGWLWDPITVAFWHNPFLNSFIL
                     GVLAVGIAYLFWQVVRLNADISWVENFRTGGHRLSTAQPKLLAPMAAMLKDKAAGKLT
                     LSASATRSVLDGIQSRLDESRELSRYLTALLIFLGLLGTFWGLLGTIDSVAAAIRGMK
                     VASGGDPASMFESLKQSLEGPLSGMGIAFSASLFGLSGSLLLGYLDLRAGQAQNRFFN
                     ELEDWLSGQTRLSAGGP"
     gene            complement(775..2352)
                     /locus_tag="VHZ56_08175"
     CDS             complement(775..2352)
                     /locus_tag="VHZ56_08175"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX4297987.1"
                     /translation="MPRCRPSWAAPDGIGRETHGNPAVLARTSLWVFKGMRYSSAFQA
                     RERFTGRHVMTLRADPRPLHQRATRAAQFGLVLAMGLGAHAAAASAQSYLADDGNGSV
                     SVDYSVLGQGGGAPASGPMNLAGSGLPGGTCSCAGAPMGVIAAAPQPTFNSPFNNMQS
                     MSAPAVPPGFMTYASAMGGATSSSSGERIVLRPPSETGGETGGQSAMPQMAAMPSASG
                     DNSAANLPMTTPAANAASAAPAATEATPPAVAAAPATEQPLPATTPTQQPQTTQTANA
                     ATDAASATTFNETPPSQPDNMPSSIPSPVQPSDTANAPVTSPAATGQSTTALPATTPT
                     QQPAVPATTATATPPAATDNSTATASTDNTAATTTPPAAADNSTATASTDNTAATAPA
                     TPTTEQQAAVTPPAPAATAPAAPSNGALPTGGTRILYKDADDSDDVPADATAGLDAVA
                     KQMLGDENMRVQIMAYAAGTDDTESKARRKSLARGLAVRSYLIKAGVRSTRIDVRALG
                     TKADGGPADRVDIVPAT"
BASE COUNT          336 a          781 c          920 g          392 t
ORIGIN      
        1 cggcccgccg gccgagagcc gggtctggcc cgagagccag tcctccaatt cgttgaagaa
       61 gcggttctgc gcctggccgg cgcgaaggtc gagatagccg agcagcagcg agcccgagag
      121 gccgaacagc gaggcggaga aagcgatgcc catgccggaa agcgggcctt cgaggctctg
      181 cttcaggctc tcgaacatgc tggcggggtc gccgccgctc gcgaccttca tgccgcggat
      241 cgccgcggcg accgaatcga tggtgccgag caggccccag aaggtgccga gcaggccgag
      301 gaagatgagg agtgccgtca gatagcgcga gagctcgcgg ctttcatcca gccgcgactg
      361 gatgccgtcg agcaccgagc gggtcgccga ggccgagagg gtgagcttgc ccgccgcctt
      421 gtccttcagc atcgccgcca tcggcgccag cagcttcggc tgcgcggtgc tcaggcgatg
      481 gccgccggtg cggaagttct ccacccagga gatgtcggcg ttgaggcgca ccacctgcca
      541 gaacagatag gcgatgccga ccgccagcac accgaggatg aacgagttga gaaacgggtt
      601 gtgccagaag gcgacggtga tcgggtccca cagccagccg gcgacgaagc cggctgccag
      661 caggccgacg atcatccaca acagttgcga tgtcggtcgg ctcatgcggt cggtctatgc
      721 ctggagctgc gcggtcggtt caagcggaag acgtgcggtt tgcgtcacgc cgggtcaagt
      781 cgccggaacg atatcgacgc gatcggcggg gccgccatcg gccttggtgc cgagcgcgcg
      841 cacgtcgatc cgggtcgagc ggacgcccgc cttgatgaga taggagcgga ccgcgaggcc
      901 gcgcgccagc gacttgcgcc gcgccttgct ctcggtgtcg tcggtgccag cggcataggc
      961 catgatctgc acccgcatgt tctcgtcgcc cagcatctgc ttggcgacgg cgtcgagacc
     1021 ggcggtggca tccgccggga cgtcgtctga atcgtccgcg tccttgtaca ggatgcgggt
     1081 gccgccggtg ggcagcgctc cgttcgacgg cgcggccggt gcggtcgcgg ccggtgctgg
     1141 cggcgtgacc gcggcctgct gctcggtcgt cggcgtcgcc ggcgcggtcg cggccgtgtt
     1201 gtccgtgctc gcggttgcgg tgctgttgtc ggcggcggcg ggcggcgtgg tcgtcgccgc
     1261 ggtgttgtcc gtgctcgcgg ttgcggtgct gttgtcggtg gcggcaggcg gcgttgcggt
     1321 cgcggtcgtc gccggcaccg cgggttgctg ggtcggcgtg gtggccggca atgcggtggt
     1381 cgattgcccg gtggcggcgg gcgaggtcac cggcgcgttc gcggtatccg acggctgcac
     1441 cggcgaaggg atcgaagacg gcatgttgtc cggctgcgac ggcggcgtct cattgaaggt
     1501 cgtggccgag gccgcgtcgg tggccgcatt ggcggtctgg gtcgtctgcg gctgctgggt
     1561 cggcgtcgtc gccggcagcg gctgctcggt cgcgggcgcc gccgcgacgg ccggcggtgt
     1621 cgcctcagtt gccgccggcg ccgcactggc cgcgttggcg gccggcgtgg tcatcggcag
     1681 attggcggcg gagttgtctc cgctcgccga cggcatcgcg gccatctgcg gcatcgcact
     1741 ctgtccgccg gtctcccccc cggtttccga aggcggccgc agcacgatgc gttcgccgct
     1801 ggaagaggag gtcgcaccgc ccatcgcgct ggcataggtc atgaagcccg gcggcaccgc
     1861 gggggccgac atgctctgca tgttgttgaa cgggctgttg aaggtcggct gcggcgccgc
     1921 ggcgatcaca cccatcggcg cgccggcaca actacaggtc ccgccgggca ggccactgcc
     1981 cgcgaggttc atcggaccgg aagccggcgc tcccccgcct tggccgagca cgctgtaatc
     2041 gacgctgacc gatccgttgc cgtcatcggc gagatagctc tgcgccgaag cggcggccgc
     2101 atgcgcgccc agccccatgg cgagcacgag gccgaattgc gctgcgcggg tggcgcgctg
     2161 atggagaggg cggggatcag cccgaagcgt catgacatgc ctgccggtga aacgttccct
     2221 agcctggaat gcagaactat aacgcatgcc cttgaaaacc cacaacgatg ttcgagccaa
     2281 gacggccggg tttccgtggg tttcgcggcc aattccgtca ggcgccgccc aggatggcct
     2341 gcagcggggc atgcagggtg ccgttggtgg cgaggatgga ctgggtctgc atcatggtct
     2401 ggccgccccg gaggtcgctg atatagccg
//
LOCUS       DATAZA010000322         6496 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3632515, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000322 DATAZA010000000
VERSION     DATAZA010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6496
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3632515"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..283
                     /locus_tag="VHZ56_08180"
     CDS             <1..283
                     /locus_tag="VHZ56_08180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2,4'-dihydroxyacetophenone dioxygenase family
                     protein"
                     /protein_id="HEX4297988.1"
                     /translation="GYVIKGRWHYLEHDWIAETGSYVFEPPGEIHTLTVPADCPEMIT
                     FFNISGCMVYLDEANKQVGFEDVFTKIDMCRRHYAACGLGADYVDQFIR"
     gene            280..999
                     /locus_tag="VHZ56_08185"
     CDS             280..999
                     /locus_tag="VHZ56_08185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4297989.1"
                     /translation="MSWATEFYAGRTAIVIGGTSGIGLAIATAFRDAGAIVHATGATA
                     AEIAAAPKSGILFQLLDVRDAAAVAAYAGSFPSVAALVDTAGVNLRAAEWTLDGFEAA
                     IDINLTGLMRVALAFRPKLSGGAVLGIGSMFSFFGAPHAPAYAASKSGLVGLVRSLAV
                     AFASEDIRVNALAPGWIETAMTAAPRADPARNAELLARMPLGRWGTPADVAPAALFLC
                     SPLARYITGAVLPVDGGYLVA"
     gene            1025..1702
                     /locus_tag="VHZ56_08190"
     CDS             1025..1702
                     /locus_tag="VHZ56_08190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020086105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT family protein"
                     /protein_id="HEX4297990.1"
                     /translation="MHLVHRIGWLRAAVLGANDGIVSVASILVGVASSGTGHDPVVLA
                     GLAGLVAGAMSMAAGEYVSVSSQTDTEQADLAREKSELETSWDDELEELALIYERRGV
                     DPQTSRTVARQLMQKDALGAHARDELGITEVSTANPVQAALTSAATFTAGAALPLLSA
                     VVTSGPSTVPAVAVVSLLVLVGLGAIGARIGGAPLWKGALRVAFWGVLAMAVTAAVGA
                     LFGTVAG"
     gene            complement(1699..2628)
                     /locus_tag="VHZ56_08195"
     CDS             complement(1699..2628)
                     /locus_tag="VHZ56_08195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX4297991.1"
                     /translation="MTKRRLGRTEMTIEPLVFGGNVLGWTLEEADAFKVLDAFLDAGF
                     AAIDTSDSYGKGKSETILGNWIKARGNRDRVLVFTKIGSEMGPGQRGLGARWIAEEVE
                     ASLKRLQTDHIDLYQSHWPDPNTPQEETLAAFDRLVQAGKVRFIGSSNQDAKLLGEAL
                     AISKRDGLARYETVQNEFNLYDRSGFEGAVQDLCVKEQVSGIGYFSLARGFLAGKYRS
                     AADAGKSPRGKSAVDKYLNDKGKRILAALDAVGKRHAAQPAEVALAWIIAQPGVGAPI
                     ASATSVEQLQSLIKGARLELSADDLRELTAAGR"
     gene            complement(2640..3032)
                     /locus_tag="VHZ56_08200"
     CDS             complement(2640..3032)
                     /locus_tag="VHZ56_08200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003570804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX4297992.1"
                     /translation="MGVRVAMVTVVVDDYARGIGFFRDALGLALIADTDMGEGKRWVV
                     VGTPGGARLLLAKAADAQQAAAIGKQAGGRVGFFLETDDFARDHAAFGAAGVRFLESP
                     RHEEYGTVAVFEDPFGNRWDLIEPKPAA"
     gene            3253..4836
                     /locus_tag="VHZ56_08205"
     CDS             3253..4836
                     /locus_tag="VHZ56_08205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007066466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4297993.1"
                     /translation="MKLTHTLLTAAAMLAVMTGSALADKTLVYCSEGSPGGFDPGFYE
                     DGTTQDVQLAAYEGLTKFKLGTTEVQPSLAEKWDISKDGLTYTFHLRHGVKWQTTDWF
                     TPTREMNADDVVYSFQRQLDGKPYDSTQTYAYFGDMGLPDLIAGVKKVDDYTVEIDLK
                     TPNSPFIADMAMPFAEIISKEYADSLAAANNSAQMNDKPVGTGPFIFVDYEKDANIRY
                     KANPDWWGGKVKIDSLVFAINTDATARLQALIAGDCQIMAYPNPADVASIKANKDLTA
                     IQESGLNAGWLSYNVQQKPFDNVDVRRALDYAIDKEAIIKAVYQGQGAPATTLLPPSM
                     WGFNKSVKGYSYDPAKAKALLAKAGVKDLTVKLWAMPVSRPYMPDGKTTAQMIQADWA
                     KVGVTANIYTVDWAEYLKDSKPHDRDGAVMIGWTGDNGDPDNFFTNNFGCAAVDGGNR
                     SEWCNKDFDALLKQAAEETDQAKRAALYEKAQVIMNDDDPAVLIAHSVVTMPMSKKVT
                     GYTIDPFGLHHFETVDIAE"
     gene            4879..5886
                     /locus_tag="VHZ56_08210"
     CDS             4879..5886
                     /locus_tag="VHZ56_08210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011005049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX4297994.1"
                     /translation="MLRFILNRLVLVIPTFIGISILSFGFIRLLPGDPVDVLSGQHTM
                     SAERHAELLHQFGLDRPIWQQYIDYVVRALQGDLGVSLSNHHSVMQQFLQLFPATVEL
                     SICALILAIVFGVILGMLAASRRDTWIDQLTMGGALVGYSMPIFWWGLLLIIVFSAGL
                     HWFPVQGRMDLAIYFKPVTGFMLIDSLLSGQKGAFLSALQHLVLPSIVLATIPLAVIA
                     RQTRSAMLEVLNEDYVRTARAKGLRESRVTALHAFRNALIPVVTTIGLQVGTLLAGAV
                     LTETIFSWPGIGKWMIDAIGHRDYTVVQGGLLLIAIVVMLVNLIVDVLYAFINPRIRV
                     Q"
     gene            5886..>6496
                     /locus_tag="VHZ56_08215"
     CDS             5886..>6496
                     /locus_tag="VHZ56_08215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010913211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX4297995.1"
                     /translation="MAETTSSEAPTETATADVATSTEIAPIVSTRRFAGLREFWGYFS
                     KNRGALIGLIVFVLLILIAIFAPFVAPHDPDDQFRDFLLAPPVWQGGTWQFILGTDPL
                     GRDMLSRLVFGSRFSLLIGLIVVTGALTFGVTLGLLAGYFRGWVDIVIMRVMDVILAF
                     PSLLLALVLVAILGPGLVNAMIAIAIVLQPHFARLTRASVMAE"
BASE COUNT         1015 a         2426 c         1901 g         1154 t
ORIGIN      
        1 cggctacgtc atcaagggcc gctggcacta tctcgagcac gactggatcg ccgagaccgg
       61 ctcctacgtc ttcgagccac ccggcgagat ccacaccctg accgtccccg ccgactgccc
      121 cgagatgatc accttcttca acatctcggg ctgcatggtc tatctcgacg aggccaacaa
      181 acaggtcggc ttcgaggacg tcttcaccaa gatcgacatg tgccgccgcc actacgccgc
      241 ctgcggcctc ggcgccgact acgtcgacca gttcatccga tgagttgggc caccgaattc
      301 tacgccggca ggaccgccat cgtcatcggc ggcacctccg gcatcggcct tgccatcgcc
      361 actgccttcc gtgacgccgg cgccatcgtc cacgccaccg gcgccaccgc cgccgaaatc
      421 gccgccgcgc ccaaatccgg aatcctgttc cagctcctcg acgtccgcga cgccgctgcc
      481 gtcgccgcct atgccggcag cttcccgtcc gtcgccgccc tcgtcgacac cgccggcgtc
      541 aaccttcgcg cggccgaatg gaccctcgac ggcttcgagg cggccatcga catcaacctc
      601 accggcctga tgcgcgtcgc cctcgccttc cggccgaaac tctcgggtgg cgccgtcctc
      661 ggcatcggct cgatgttctc gttcttcggc gcgccgcacg cccccgccta tgccgccagc
      721 aagtcgggcc tcgtcggtct cgtcagatcg ctggccgtcg ccttcgcgtc cgaggacatc
      781 cgcgtcaacg cccttgcccc cggctggatc gagactgcca tgaccgcggc gccgcgcgcc
      841 gaccccgccc gcaatgccga gctgctcgcc cgcatgccgc tcggccgctg gggtaccccg
      901 gccgacgtcg ccccggcggc gctgttcctc tgctcgccgc tcgcccgcta catcaccggc
      961 gccgtgctcc ccgtcgatgg gggctacctt gtcgcctgag gtctcgccct cgatccatcc
     1021 cgagatgcat ctcgtccacc gcatcggctg gctgcgcgcc gccgtgctcg gcgccaatga
     1081 cggcatcgtc tcggtcgcct cgatcctcgt cggcgtcgcc agctccggca ccggccatga
     1141 cccggtggtg ctcgccggcc ttgccggcct cgtcgccggc gccatgtcga tggccgccgg
     1201 cgagtacgtc tcggtgagct cgcagaccga caccgagcag gccgatctgg cgcgcgaaaa
     1261 atccgagctc gagaccagct gggacgacga gctcgaggag ctggcgctga tctacgagcg
     1321 ccgcggcgtc gacccgcaga cctcccgcac cgtcgcccgc cagctcatgc agaaggatgc
     1381 cctcggcgcc catgcccgcg acgagctcgg catcaccgag gtctcgaccg ccaatcccgt
     1441 gcaggccgcg ctcacctccg ccgcgacctt caccgccggc gccgccctgc cgctcctcag
     1501 cgccgtcgtc accagcggcc cgtcgaccgt ccccgccgtg gccgtcgtct cgctgctcgt
     1561 gctggtcggc ctcggtgcca tcggcgcccg catcggcggt gcaccgctgt ggaaaggcgc
     1621 gctgcgcgtc gccttctggg gcgtcctcgc gatggccgtg accgccgccg tcggcgccct
     1681 gttcggaacg gtggccggct agcgtcccgc cgccgtcagt tcccgcaggt cgtccgcgct
     1741 cagctccagc cgcgccccct tgatcaagct ctgcagctgc tcgaccgatg tcgccgacgc
     1801 gatcggcgcc ccgactcccg gctgcgcgat gatccacgcc agcgccacct ccgccggctg
     1861 cgccgcatgc cgcttgccca ccgcatcgag cgccgcgagg atccgcttgc ccttgtcgtt
     1921 gagatatttg tcgaccgccg acttgccgcg cgggctcttg ccggcgtccg ccgcgctgcg
     1981 gtacttgccc gcgaggaagc cccgcgccag gctgaaatag ccgatcccgg acacctgctc
     2041 cttgacgcac agatcctgca ccgcgccctc gaagccgctg cggtcgtaga ggttgaactc
     2101 gttctgcacc gtctcgtagc gcgccagccc gtcgcgcttc gagatcgcca gcgcctcgcc
     2161 cagcagcttc gcatcctggt tcgacgagcc gatgaaccgc accttgcccg cctgcaccag
     2221 ccggtcgaac gccgcgagcg tttcctcctg cggcgtgttc gggtcgggcc agtggctctg
     2281 gtagagatcg atgtggtccg tctgcagccg cttcagcgac gcctcgactt cctcggcgat
     2341 ccacctggcg ccgagcccgc gctgccccgg acccatctcc gagccgatct tggtgaacac
     2401 cagcacccgg tcgcgattgc cgcgcgcctt gatccagttg ccgaggatcg tctccgactt
     2461 gcccttgccg tagctgtccg acgtgtcgat ggcggcaaag cccgcatcga ggaacgcgtc
     2521 gagcaccttg aacgcgtcgg cttcctcgag cgtccagccc agcacgttgc cgccaaagac
     2581 cagcggctcg atcgtcatct cggtgcggcc aaggcggcgc ttcgtcatct tacatattcc
     2641 tatgctgcag gtttgggttc gatcaggtcc cagcggttgc cgaacgggtc ttcgaatacc
     2701 gccacggtgc catactcctc gtgccgcggc gactcgagga agcgcacgcc ggccgcgccg
     2761 aatgccgcat ggtcgcgcgc gaaatcgtcg gtctcgagga aaaacccgac gcggccgccc
     2821 gcctgcttgc cgatcgctgc cgcctgttgc gcatccgcgg ccttcgccag cagcagtcgc
     2881 gcgccgcccg gcgtgcccac caccacccag cgcttgccct cgcccatgtc ggtgtcggcg
     2941 atgagcgcga gccccagcgc gtcgcggaag aagccgatgc cgcgggcata gtcgtcgacc
     3001 accaccgtca ccatggcaac gcgcacgccc atgccacgcc tccttctctt tacttgacca
     3061 tttggtcaac cacgccagtc gcttagcatg cttcgcattg cgcgtagcgg tccgcccgga
     3121 gagaaaaacc gcgttcaagt ccaagtgtct agacgaatat tcccgttgcg ccccaagccg
     3181 aaaaacgctt tgttgcccgc caggctcggg gtgggcaaat acccgggcgc aatagttttt
     3241 cgggagacat ccatgaaatt gacgcacaca ctgctgaccg cagcggcgat gctcgctgtg
     3301 atgaccggca gcgcccttgc agacaagacg ttggtctact gctccgaagg ttcgcccggc
     3361 ggcttcgacc ccggcttcta cgaggacggc accacccagg acgtccagct cgcggcttat
     3421 gaagggctga ccaagttcaa gcttggcacc accgaagtgc agccctcgct ggccgagaag
     3481 tgggacattt ccaaggatgg cctgacctac accttccacc ttcgccatgg cgtcaagtgg
     3541 cagaccaccg actggttcac gccgacgcgc gagatgaatg ccgacgacgt cgtctactcg
     3601 ttccagcgcc agctcgacgg caagccctac gactcgaccc agacctacgc ctatttcggc
     3661 gacatgggcc tccccgacct gatcgcgggc gtcaagaagg tcgacgacta caccgtcgag
     3721 atcgacctca agacgccgaa ctcgccgttc atcgccgaca tggccatgcc cttcgccgag
     3781 atcatctcga aggaatatgc ggacagcctc gcggcggcca acaactccgc ccagatgaat
     3841 gacaagccgg tcggcaccgg cccgttcatc ttcgtcgact acgagaagga cgccaacatc
     3901 cgctacaagg ccaatcccga ctggtggggt ggcaaggtga agatcgacag cctcgtgttc
     3961 gcgatcaaca ccgatgcgac ggcccgcttg caggccctga ttgccggcga ctgccagatc
     4021 atggcgtacc ccaatccggc cgacgtcgcc tcgatcaagg cgaacaagga cctgacggcc
     4081 atccaggaaa gcggcctcaa cgccggctgg ctgtcctaca acgtccagca gaagccgttc
     4141 gacaatgtcg acgtccgccg ggcgctggat tacgccatcg acaaggaagc catcatcaag
     4201 gccgtctacc agggccaggg cgcaccggcg accaccctgc tgccgcccag catgtggggc
     4261 ttcaacaagt ccgtgaaggg ctactcctac gatcccgcca aggccaaggc gctgctcgcc
     4321 aaggccggcg tcaaggacct gacggtcaag ctctgggcca tgcccgtcag ccgtccgtac
     4381 atgcctgacg gcaagaccac cgcgcagatg atccaggcgg attgggccaa ggtcggcgtc
     4441 accgccaaca tctacacggt cgactgggcg gaatacctca aggacagcaa gccgcacgac
     4501 cgcgatggtg ccgtgatgat cggttggacc ggcgacaatg gtgacccgga caacttcttc
     4561 accaacaact tcggctgcgc tgccgtcgat ggcggcaatc gctccgagtg gtgcaacaag
     4621 gacttcgacg ccctgctcaa gcaggcagcg gaagagaccg accaggccaa gcgtgcggcg
     4681 ctctacgaaa aggcgcaggt catcatgaac gacgatgacc cggcggtcct gatcgcccac
     4741 tccgtcgtca ccatgccgat gtccaagaag gtcaccggct acacgatcga tccgtttggt
     4801 ctccaccact tcgagaccgt cgacatcgcc gaataaggat tttgcgggcg ggggcctcat
     4861 ggctcccgcc ccttttccat gctgcgtttc attctcaatc ggctggtctt ggtgatcccg
     4921 acattcatcg ggatttctat tttgtcgttc gggttcattc ggctgctgcc cggcgatccg
     4981 gtcgatgtgc tgtcgggcca gcacaccatg agcgccgagc ggcacgccga gctgctccac
     5041 cagttcggcc tcgatcgccc gatctggcag caatatatcg actacgtcgt cagggccctg
     5101 cagggcgatc tgggcgtctc gctcagcaac caccattcgg tgatgcagca gttcctgcag
     5161 ctgtttccgg ccacggtcga gctgtcgatc tgtgcgctga tcctcgccat cgtcttcggc
     5221 gtgatcctcg gcatgctcgc cgcgagccgc cgtgacacct ggatcgacca gctcaccatg
     5281 ggcggcgccc tggtcggcta ctcgatgccg atcttctggt ggggcctgct gctcatcatc
     5341 gtgttttccg ccggcttgca ttggttcccg gtgcagggcc gcatggacct cgccatctac
     5401 ttcaagccgg tcaccggctt catgctgatc gacagcctgc tgtcgggcca gaagggcgcc
     5461 ttcctgtcgg cgctgcagca tctcgtgctg ccctcgatcg tgctggcgac gatcccgctg
     5521 gcggtgatcg cccggcagac gcgctcggcc atgctcgagg tgctcaacga ggattacgtc
     5581 cgcaccgccc gcgccaaggg gctccgcgaa tcccgcgtca ccgcgctcca cgccttccgc
     5641 aacgcgctga tcccggtggt gacgaccatt ggcctgcagg tcggcacgct gctcgccggc
     5701 gccgtgctca ccgagaccat cttttcgtgg cccggcatcg gcaagtggat gatcgacgcc
     5761 atcggccatc gcgactacac cgtggtgcag ggcggcctgc tgctgatcgc catcgtggtg
     5821 atgctcgtca acctcatcgt cgacgtgctt tacgccttca tcaatccacg catccgggtg
     5881 cagtgatggc tgaaaccacc tcgagcgagg cgccgaccga gaccgccacc gccgacgtcg
     5941 ccacctcgac cgagatcgcc cccatcgtca gcacccggcg ctttgccggc ctgcgcgagt
     6001 tctggggcta tttctcgaag aaccgcggcg ccctgatcgg cctgatcgtc ttcgtgctgc
     6061 tgatcctcat cgccatcttc gcgcccttcg tcgccccgca cgatccggac gaccagttcc
     6121 gcgacttcct gctggcgccg ccggtctggc agggcggcac ctggcagttc atcctgggca
     6181 ccgacccgct cggccgcgac atgctttcgc gcctcgtctt cggctcccgc ttctcgctgc
     6241 tcatcggcct catcgtggtc accggcgccc tgaccttcgg cgtcactctc ggcctgctcg
     6301 ccggctattt ccgcggctgg gtcgacatcg tcatcatgcg cgtcatggac gtcatcctgg
     6361 ccttcccctc gctgctgctg gcgctggtgc tggtcgccat cctcgggccc ggcctcgtca
     6421 acgccatgat cgccatcgcc atcgtgctgc agccgcattt tgcccgcctc acccgggcct
     6481 cggtgatggc cgagaa
//
LOCUS       DATAZA010000323         2172 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2936944, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000323 DATAZA010000000
VERSION     DATAZA010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2172
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2936944"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..691
                     /locus_tag="VHZ56_08220"
     CDS             <1..691
                     /locus_tag="VHZ56_08220"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX4297996.1"
                     /translation="VEAETMDDLRLLAPHLRRAVQISRLLDLTTNAAATFEAALSAMA
                     SAAVLVDADMKLVYANPAARRMLDGGDAIRSNGGRLELTPLLVPGQLEIAVRAAVGPD
                     IALGRRGLGIPGRRLDGTPVVLHVLPLEQRSPRTGAPWKSVAAVFIADTGGAAAVPID
                     ALAILFDLTPMETRVLELTVAGHSSRQAAEALAVAPSTIKTHMLNLFAKTGRHRREDL
                     VRLAREASLPG"
     gene            complement(680..1978)
                     /locus_tag="VHZ56_08225"
     CDS             complement(680..1978)
                     /locus_tag="VHZ56_08225"
                     /inference="COORDINATES: protein motif:HMM:NF016062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004671 - protein C-terminal
                     S-isoprenylcysteine carboxyl O-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006481 - C-terminal protein methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEX4297997.1"
                     /translation="MRIGTASVERLAPSQLPVALAAVPPRSASSAWVGATGIAAALSS
                     IALLQSWLEPGWMKAVAVLAIVAAAMIATDAATHRLRGVPWGLDAQALRPPNLLRVGQ
                     KLVGFWLTIGALAAGYWLLPVYADPAFDAFRDAAFGCLPALVVVAPFYIAYVDRRQPD
                     PDDAFLQLPALLAGARPADWTILRQHVLGWIVKGFFLPLMFGYVTADLAALWSGPLLP
                     RLDGFEPIFNRLIDLFYLLDVLLAAIAYTLTLRLLNSHIRSVEPTVFGWIACLACYPP
                     FNSVTGRFLPYDQDNLFWGGVFAATPVLYVLWGTAILALVSIYMWSTAAFGLRFSNLT
                     HRGIITSGPYRWSRHPAYISKNLSWWLISVPFIAGAGWAQAVQSCLLLAGVNLIYYLR
                     ARTEERHLGRDPAYRQYAEFIERRGLFATLARLGAGVLAR"
BASE COUNT          375 a          717 c          801 g          279 t
ORIGIN      
        1 ggtcgaagcc gagacgatgg acgatctgcg gctgctggcg ccgcatctca ggcgcgccgt
       61 gcagatcagc cggctgctcg acctcacgac caatgccgcc gcgaccttcg aggcggcgct
      121 gtcggcgatg gcctcggccg cagtgctggt cgatgcggac atgaagctgg tctatgccaa
      181 tccggctgcg cgccgcatgc tcgacggcgg cgacgcgatc cgcagcaacg gcggccggct
      241 ggagttgacc ccgctgctgg tccccggcca gctcgagatc gcggtgcggg cggccgtcgg
      301 acccgacatt gcgctgggcc ggcgcggcct cggcattccc ggtcggcggc tggacggcac
      361 cccggtggtg ctgcacgtgc tgccgctgga acagcgttcg cctcgcaccg gtgcaccgtg
      421 gaagtcggtg gccgcggtgt tcatcgccga caccggcggc gcagcggcgg tgccgatcga
      481 cgccctggcg atcctgttcg acctgacgcc gatggaaacg cgggtcctcg agctgacggt
      541 ggcggggcat tcgagccggc aggcggccga ggccctggcg gtggccccga gcacgatcaa
      601 gacgcacatg ctcaacctgt ttgccaagac cggccggcac cggcgggaag atttggtgcg
      661 gctggcgcgc gaggcctcgc taccgggcta ggacgccggc accgagcctt gcgagcgtgg
      721 cgaagaggcc gcgacgctcg atgaactcgg cgtactggcg gtaagccgga tcgcgtccga
      781 gatggcgctc ctcggtgcgg gcccgcagat agtagatcag gttgacgccg gcgagcagca
      841 ggcaagactg taccgcctgc gcccacccgg cgccggcgat gaacggcacc gagatcagcc
      901 accagctgag gttcttggag atgtaggcag gatgccgcga ccagcggtac gggccgctgg
      961 tgatgatgcc gcggtgcgtg aggttggaga accgcaggcc gaaggccgct gtcgaccaca
     1021 tgtagatcga gaccagcgcc aggatcgccg tgccccacag cacgtagagc accggcgtcg
     1081 cggcgaagac cccgccccaa aagagattgt cctggtcgta gggcaggaac ctgccggtga
     1141 cgctgttgaa gggcggatag caggcgaggc acgcgatcca gccgaacacc gtcggctcga
     1201 cggagcggat gtgggagttc agcagccgca gggtcagcgt ataggcgatg gcggcgagca
     1261 gcacgtcgag caggtagaac aggtcgatga gccggttgaa gatcggctcg aagccgtcga
     1321 ggcgcggcag cagcggtccg gaccagaggg ccgcgaggtc ggcggtgacg tagccgaaca
     1381 tcagcggcag gaagaagccc ttcacgatcc agccgaggac gtgctggcgc aggatagtcc
     1441 agtcggcggg cctggcgcct gccagcaaag ccgggagctg caggaaggca tcgtcgggat
     1501 cgggctgccg gcgatcgaca taggcgatgt agaacggcgc aacgacgacg agtgccggca
     1561 ggcagccgaa cgccgcatcg cgaaaggcat cgaacgcggg atcggcgtag accggcaaca
     1621 gccagtagcc cgcggccagg gcgccgatgg tgagccagaa gccgacgagc ttctgcccga
     1681 cccggagaag gttcggcggc cgcagcgcct gcgcgtccag accccagggc acgccgcgca
     1741 ggcgatgcgt cgcggcatcg gtcgcaatca tcgccgccgc cacgatcgcc agcaccgcga
     1801 cggccttcat ccagcccggc tcgagccagg actgcagcag cgcgatcgac gacagcgccg
     1861 ccgcaatacc cgtcgcgccg acccaggcac tgctcgccga acggggtggg acggcagcga
     1921 gcgctacggg cagctggctc ggcgcaagac gctcaacgga ggcggtgccg atcctcacgt
     1981 atccggcgtg cccccgccgt tgtcgccaac ggtgccggag ctggtgcccg gattcgtgcc
     2041 ggagctggag cccgaactgg tgccggagct gcccgacccc gggtcaccgc cgctggaacc
     2101 cgaactggtg cctggattcg taccggagct ggtgcccgaa ctggtgccag agctgcccga
     2161 ccccgggtcg ct
//
LOCUS       DATAZA010000324         1515 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1428342, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000324 DATAZA010000000
VERSION     DATAZA010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1428342"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(92..1492)
                     /gene="leuC"
                     /locus_tag="VHZ56_08230"
     CDS             complement(92..1492)
                     /gene="leuC"
                     /locus_tag="VHZ56_08230"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003492521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEX4297998.1"
                     /translation="MGRTLYDKIWDDHLVTNNPDGTSLIYIDRHLVHEVTSPQAFEGL
                     RLSKRKVRSPERTLAVVDHNVPTTDRSLPNPDPESAIQIETLAENTRDFGIEYYDPFD
                     KRQGIVHIVGPEQGFTLPGMTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQ
                     QKARNMLVRVDGQLPPGVTAKDIILAIIGEIGTAGGTGHVIEYAGEAIRALSMEGRMT
                     ICNMSIEGGARAGLIAPDETTFAYVKGRPRAPKGKAWDMALDYWTTLNSDADAQYDKI
                     VVLDAAKLPPIVSWGSSPEDVVSVNGAVPNPDEIADENKRASKWRALDYMGLKPGTKI
                     TDIAIERVFLGSCTNGRIEDLRAAAKVVAGKKVAAGVNAMVVPGSGLVKEQAEAEGLD
                     KVFKEAGFDWREPGCSMCLAMNPDKLKPQERCASTSNRNFEGRQGFKGRTHLVSPTMA
                     AAAAVAGHFVDIREWH"
BASE COUNT          215 a          512 c          505 g          283 t
ORIGIN      
        1 aacggctgcg gcaactcggc gatggcctgg cgcgccagca cctcgaaatc atcgaggctc
       61 ggcgcgcttt ggtcgctcca gtcgaggccg ctcagtgcca ctcgcgaatg tcgacgaaat
      121 ggcccgcgac cgcggccgcc gccgccatcg tcggcgacac caggtgggtg cgacccttga
      181 agccttgccg gccctcgaaa ttgcggttgc tggtcgaggc gcagcgctcc tgcggcttga
      241 gcttgtcggg gttcatcgca aggcacatcg agcagcccgg ctcgcgccag tcgaagcctg
      301 cctccttgaa caccttgtcg agcccttcgg cctcggcctg ctccttgacc aggcccgacc
      361 ccggcacgac catggcgttg acgcccgccg cgaccttctt gccggccacc accttggcag
      421 cggcgcgcaa atcctcgatg cggccattgg tgcacgagcc gaggaacacc cgctcgatgg
      481 cgatgtcggt gatcttcgtg cccggcttca ggcccatgta gtcgagggcc cgccatttgc
      541 tggcgcgctt gttctcgtcg gcgatctcgt ccgggttcgg caccgcgccg ttgaccgaca
      601 cgacatcctc gggcgacgag ccccacgaga cgatcggcgg cagcttggcg gcgtcgagca
      661 ccacgatctt gtcgtactgc gcgtcggcat cggaattgag ggtcgtccag tagtcgagcg
      721 ccatgtccca cgccttgccc tttggcgccc gcgggcggcc cttgacgtag gcgaacgtcg
      781 tttcatccgg cgcaatcagc ccggcgcggg cgccgccctc gatcgacatg ttgcagatgg
      841 tcatgcggcc ttccatcgac agcgcgcgga tggcttcgcc cgcgtactcg atgacgtggc
      901 cggtgccgcc ggcggtgccg atctcgccga tgatcgcgag gatgatgtcc ttggcggtga
      961 cgcccggcgg cagctggccg tcgacccgca ccagcatgtt cctggccttc tgctggatca
     1021 gcgtctgcgt ggcgagcacg tgctcgacct ccgacgtgcc gatgccatgc gccagggcac
     1081 cgaaggcgcc gtgcgtcgag gtgtggctgt cgccgcagac gatggtcatg cccggcagcg
     1141 tgaacccctg ctccggcccg acgatgtgga cgatgccttg ccgcttgtcg aaggggtcgt
     1201 aatattcgat gccgaaatcg cgggtgttct cggccagcgt ttcgatctgg atggcgctct
     1261 cggggtccgg attgggcagc gagcggtcgg ttgtcggcac gttgtggtcg accaccgcca
     1321 gcgtgcgctc gggcgagcgc accttgcgct tgctgaggcg cagcccctcg aacgcctgcg
     1381 ggctcgtgac ctcgtgcacc agatgccggt cgatatagat gagcgacgtg ccgtcgggat
     1441 tgttggtgac caggtgatcg tcccagatct tgtcgtacag cgtgcggccc atcggcgaaa
     1501 agtcccgtgt ctcaa
//
LOCUS       DATAZA010000325         1851 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3401488, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000325 DATAZA010000000
VERSION     DATAZA010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3401488"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1267
                     /locus_tag="VHZ56_08235"
     CDS             <1..1267
                     /locus_tag="VHZ56_08235"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019173416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009063 - amino acid catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HEX4297999.1"
                     /translation="ALPEGRLSLGCRLYGSLAYTGEGHGTIRAVLCGLLGLQPQSYDR
                     AIADAELAALARSGTARLPNGRVVGLPPDAVQVEKGARLPAHPNGMTFFLADADGTEI
                     LAESYYSIGGGFVLTAAEMAAGPAMAGAEDVPYPFANAAEMLAMGEASGLAIAGMKRA
                     NEMARGGADDLDRRIMAIWEVMDRCIDRGLHNDGVLPGGLNVRRRARGLNDKLTARAG
                     ANDAPLHSAVDWLQAYAMAVNEENAAGGQVVTAPTNGAAGVIPAVIRYYLDLVPGASR
                     DRVPDMLLTAAAVGGIIKSNASISGAEVGCQGEVGSASAMAAAALCAVMGGTNAQIEN
                     AAEIALEHHLGMTCDPIRGLVQVPCIERNGMGAVKAVAAASLAVLGDGQHIVPLDAAI
                     ETMRQTGRDMDERYKETSLGGLSVSLPEC"
     gene            complement(1274..1639)
                     /locus_tag="VHZ56_08240"
     CDS             complement(1274..1639)
                     /locus_tag="VHZ56_08240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298000.1"
                     /translation="MDGKTKATGGFYRGDAARLVSEAARAIPQPVEPAPRAAEPPKRP
                     NAPPIRLDEPNRPPLAPDPPTNQNLRAPRPARAPGLARVMPGPGRLTAWVVLAPWYIA
                     VAFGALWIDVLFVKDALGL"
BASE COUNT          287 a          602 c          683 g          279 t
ORIGIN      
        1 cgcgctgccg gaaggacggc tgtcgctcgg ctgccgcctc tacggctcgc tcgcctatac
       61 cggggagggg cacggcacga tccgggcggt gctgtgcggc ctgctcgggc tgcagcccca
      121 gagctacgac cgcgcgatcg ccgacgccga gctggcggcg ctggcgcgat cgggaaccgc
      181 acggttgccg aatggccggg tcgtcggcct gccgccggat gccgtacagg ttgaaaaggg
      241 cgcgaggttg ccggcgcatc cgaatggaat gacattcttc ctggccgatg cggacggcac
      301 cgagatcctc gctgaaagct actactcgat cggcggcggc ttcgtgctca ccgccgccga
      361 gatggccgcc gggccggcga tggccggcgc cgaggatgtg ccgtatccgt tcgccaacgc
      421 cgccgagatg ctggcaatgg gcgaggcttc ggggcttgcc atcgccggca tgaaacgcgc
      481 caacgagatg gcgcggggcg gcgcggacga tctcgaccgg cggatcatgg cgatctggga
      541 ggtgatggat cgctgcatcg accgcgggct gcacaatgac ggcgtcctgc cgggcggcct
      601 caatgtgagg cggcgcgcca ggggtttgaa cgacaagctc acggcgcggg ccggcgccaa
      661 tgacgcgccg ctgcattcgg ccgtcgactg gctgcaggcc tatgcgatgg cggtgaacga
      721 ggagaacgcc gccggtgggc aggtggtgac ggcccccact aacggggcgg cgggtgtcat
      781 cccggcggtg atccgctact atctcgatct cgtgcccggc gcctcgcgcg acagggtccc
      841 ggacatgctg ctgacggcgg cggcggtcgg cggcatcatc aagtccaacg cctcgatctc
      901 cggcgccgag gtcggctgcc agggcgaggt cggctccgcc tcggcgatgg cggcggcagc
      961 gctgtgcgcg gtgatgggcg gcacgaatgc gcagatcgag aatgcggccg agatcgccct
     1021 cgagcaccat ctgggcatga cctgcgatcc gatccgcggc ctggtgcagg tgccctgcat
     1081 cgagcgcaac ggcatgggag ccgtgaaggc ggtggcagcg gcgtcgctgg cggtgctggg
     1141 cgacggccag cacatcgtgc cgctcgatgc agcaatcgag acgatgcggc agaccggccg
     1201 cgacatggac gagcgctaca aggaaaccag tctcggcggc ctcagcgtca gcctgccgga
     1261 atgctgagcg ggcctaaagc cccagcgcgt ccttgacgaa cagcacgtcg atccacagcg
     1321 ccccaaacgc gacggcaata taccagggcg ccagcacgac ccaggcggtg aggcggccgg
     1381 gaccgggcat gacgcgtgcc agtcccggcg cccgggccgg acgtggcgcg cgcagattct
     1441 ggttggtcgg cggatcgggc gccagcggcg gccggttcgg ctcgtcgagc cggatcggcg
     1501 gagcgttggg tcgcttcgga ggttcagcag cgcgcggggc gggctcgacg ggctgcggga
     1561 tggcgcgcgc cgcttccgac acgagacgag ccgcatcccc ccggtaaaag ccgccggtgg
     1621 ccttggtctt gccgtccaac tgatccgccc acaacgcccg ctactgtggt cagttgaatc
     1681 actgaggccg cgccctgtaa atcggggggg agccgaacaa ttgccgctaa tccactactt
     1741 cttttgggta ttcctcggtt tttacgaggg tgtattgatt ggtatcggtc ccgctgcgcc
     1801 cgggacggtc cattgcactg cgccggcctc gcgcacgacc ctgtcgatga a
//
LOCUS       DATAZA010000326         5240 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3053951, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000326 DATAZA010000000
VERSION     DATAZA010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5240
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3053951"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..822
                     /gene="gluQRS"
                     /locus_tag="VHZ56_08245"
     CDS             <1..822
                     /gene="gluQRS"
                     /locus_tag="VHZ56_08245"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020095080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HEX4298001.1"
                     /translation="APSPNGYLHLGHAYSALFTRFWSDRLGGSFLLRLEDIDGTRCKP
                     AFAQAILDDLRWLGLDWPEPVMLQSARLPAYIAAADALRAQGLLYPCFCSRTAIAAHA
                     HGIDPDGAPLYDGACHRLSTTGIADRLARGDPVQWRLDSAAAIALAGPLAFAVAQPAP
                     ADPPQLRDARPWLWGDVVVQRKETPASYHLSVVVDDAAQGVTHVTRGQDMEAATDLHV
                     LLQRLLGLPQPIYSFHRLILDAAGRKLGKSRGSTTLRDLRAAGRTAADIRVELGF"
     gene            complement(840..1799)
                     /locus_tag="VHZ56_08250"
     CDS             complement(840..1799)
                     /locus_tag="VHZ56_08250"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX4298002.1"
                     /translation="MSTGKVVVLGINGHIGKAVAEAFATAGWDVTGMGRSDKHRLAGV
                     KFVAGDSDSVADMRRAIGDAEIVVNALNMRYDQWFDGRLEAQMRRVLEALGTSGRTLL
                     FPGNIYNYAADSDRLTPDLPQHPPTPRGAIRVRVEQMFREAAERGDIQAIILRAGDFF
                     GPGAGGDWFDQIIMREAKAGKASVIGTPGVGHSWAYLPDLGRGFEALASLRSSLGPFE
                     TFHFAGSHVTPEEMGAAIGKASPGLKISVFPFWMLRLFGMVDPVVREVARMRYIWQHP
                     LQLTDARLDELLGPDFGTPFDEAVAATVAPFLTGNQLPVAKAA"
     gene            1899..2822
                     /locus_tag="VHZ56_08255"
     CDS             1899..2822
                     /locus_tag="VHZ56_08255"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX4298003.1"
                     /translation="MATPEPDWALWRSFAAVVADGSLSAAARRIGYSQPTLGRHVEAL
                     EQQLGVTLFDRTLQGLKPTATALRLYQSVAAAEEKLAEAALVAEGSTGELEGTVRVTA
                     SSIVAHYVLPPILRAIRQDFAAIAIELVPSDSVENLLLRESDIAVRMFRPTQLELIAK
                     RLGEVPIVATAHASYLGQHGTPETAADLGRHVLVGLDRDDQILRGARALGFELKRADF
                     ALRTDSQTAMWEMLKAGLGIGFAQLGLVRDTPGMRVLLPALQPPPLEVWLTTHRELFL
                     SPRIRAIYDRLAAGLGDYVGRLARGADRTEP"
     gene            2819..3025
                     /locus_tag="VHZ56_08260"
     CDS             2819..3025
                     /locus_tag="VHZ56_08260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin transmembrane helix small protein"
                     /protein_id="HEX4298004.1"
                     /translation="MNNQVVTIITILACLAVAGILFMGLWNMFKGGDANRSQMLMRAR
                     VIAQFVALVILLGALYFFGRGPQG"
     gene            3034..3642
                     /locus_tag="VHZ56_08265"
     CDS             3034..3642
                     /locus_tag="VHZ56_08265"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012559119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HEX4298005.1"
                     /translation="MVKLNKIYTKTGDDGTTGLVRGPRRLKYDLRVDCFGTVDEANAA
                     IGVARLSTVSMPKIDNMLGRIQNDLFDLGSDLATPGADPEGAPPALRITPRQTQWLET
                     MIDQYNEGLAPLDSFVLPGGTALSAALHVARTVVRRAERQVVELVLGEPSVNAEAMVY
                     LNRLSDLLFVLGRVANANGKNDVLWTPGRYGHDSKGTPEDRS"
     gene            3639..4127
                     /locus_tag="VHZ56_08270"
     CDS             3639..4127
                     /locus_tag="VHZ56_08270"
                     /inference="COORDINATES: protein motif:HMM:NF015648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HEX4298006.1"
                     /translation="MSYVQSVIQPGEQVLATGHMHWIVYARGLVILVLALIAFLLPAP
                     SGFGVVLVIVAVLLLVLALLDLFRAWFVKVTTEIAVTNLRVIHKRGFIRRVTQEMNMG
                     KVESVNVDQTLLGRAFDYGSIVVRGTGSGIEGLDYIAHPLQLRSAIVVNEGAIAAAPP
                     RQ"
     gene            complement(4121..5089)
                     /locus_tag="VHZ56_08275"
     CDS             complement(4121..5089)
                     /locus_tag="VHZ56_08275"
                     /inference="COORDINATES: protein motif:HMM:NF021423.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2125 domain-containing protein"
                     /protein_id="HEX4298007.1"
                     /translation="MTRLIILTIVIVLVVAGWTGAWFWGAGQISAYEKTLEAADGVTT
                     PKLSCKSFGVGGWPFGFDLTCTGATVTLADTTVTASGLKATALVYDPTHVLVFAQSPV
                     GIADAFTGSQSRVDFKSAEASARLDGWRIGRISVVVEAPVWNDTVLDDQLIARADHLE
                     AHLVDVPEDHDAKAGLASVAEYAEVDHLSAPGFQVNSGESTFEGRVTDLPDDVRTYGD
                     PALLKRWQAAGGKFLLAGFKGDDGDSNFSATGTLGLDTQGRVEGQLKLNSKGVVERLG
                     DLIPAQLKPVIVGGQAADGSYSQTVNIAGGVVFTGLVPTAAIPSLY"
BASE COUNT          775 a         1964 c         1664 g          837 t
ORIGIN      
        1 gccccgagcc cgaatggcta tctgcatctc ggccatgcgt actcggcact gttcacccgg
       61 ttctggagcg accggctcgg cggcagtttc ctgctccgtc tcgaagacat agacggcacc
      121 cgctgtaaac ccgcctttgc ccaggcgatc ctcgacgacc tccgctggct cggcctcgac
      181 tggccggagc cggtgatgct gcagtcggcg cgcctgccgg cctatatcgc cgcggccgat
      241 gcgctgcgcg cccagggcct gctctacccc tgcttttgtt cgcgcacggc gatcgcagcc
      301 cacgcgcacg gcatcgaccc ggatggcgca ccgctctatg acggcgcctg ccatcgtctg
      361 tccacgaccg ggatcgccga ccgcctcgcg cgcggcgacc ccgtgcagtg gcggctcgac
      421 agcgccgccg ccatcgcgct cgccgggcct ctggcctttg ccgtggcgca gccggcgccg
      481 gccgacccgc cgcagctccg cgacgcccgg ccatggctct ggggcgatgt ggtcgtgcag
      541 cgcaaggaga cgccggccag ctaccatctc agcgtcgtcg tcgacgacgc ggcgcagggc
      601 gtcacccacg tcacccgcgg ccaggacatg gaggccgcga ccgacctcca cgtgctgctg
      661 cagcggctcc tcggcctgcc gcagccgatc tacagcttcc accgcctcat cctcgacgcc
      721 gccggccgca agctcggcaa gtcccgcggc tcgacaacgc tccgcgatct tcgcgccgcc
      781 ggacgcacgg cggccgatat ccgcgtcgag cttggcttct aggccatcgc tctactggct
      841 cacgccgcct tggcgaccgg cagttggttc cccgtgagga acggcgccac tgtcgccgcc
      901 accgcctcgt cgaacggcgt gccgaaatcc ggccccagca gctcgtccag acgcgcatcg
      961 gtgagctgta gcgggtgctg ccagatgtag cgcatccgcg ccacctcgcg caccaccgga
     1021 tcgaccatcc cgaacagccg cagcatccag aacgggaaga ccgagatctt cagccccggc
     1081 gacgccttgc cgatcgccgc gcccatttcc tccggcgtga cgtgagagcc ggcaaagtgg
     1141 aaggtctcga acggcccgag gctggagcgc agcgaggcca gcgcctcgaa gccgcggccg
     1201 aggtccggca ggtacgccca gctgtgcccg acgccgggcg tgccgatgac gctggccttg
     1261 ccggccttgg cctcgcgcat gatgatctgg tcgaaccagt cgccgccggc gcccgggccg
     1321 aagaaatcgc cggcccgcag gatgatcgcc tggatgtcgc cgcgctcggc ggcctcccgg
     1381 aacatctgct ccacccgcac ccggatggcg ccccgcggcg tcggcgggtg ctgcggcaga
     1441 tcgggggtca gccggtcgct gtccgccgcg tagttgtaga tgttgcccgg aaacagcagc
     1501 gtcctgccgc tcgtccccag cgcctcgagc acccggcgca tctgcgcctc gagcctgccg
     1561 tcgaaccatt ggtcgtagcg catgttgagc gcgttcacga cgatctcggc gtcgccgatc
     1621 gcccggcgca tgtcggcgac cgagtccgaa tcgcccgcca cgaatttcac ccccgccagc
     1681 cgatgcttgt cgctgcggcc catgcccgtg acgtcccagc cggcggtcgc gaaggcttcc
     1741 gccaccgcct tgccgatatg cccgttgatg ccgaggacga cgaccttgcc cgtgctcatt
     1801 ttctggctcc ttgcctgtgg atgagccgaa gatgggccat tcacatggaa tgcaaaattg
     1861 tcgatgattg aagaatagcc attcaaggat gcatgggcat ggcgaccccc gaaccggact
     1921 gggcgctctg gcgatcgttt gccgccgtcg ttgccgacgg ctcgctgtcg gccgccgcgc
     1981 ggcgcatcgg ctatagccag cccaccctcg gccgtcacgt cgaggcgctc gagcagcagc
     2041 tcggcgtcac tctcttcgac cgcacgctgc agggcctgaa gccgaccgcc accgcgctgc
     2101 ggctctacca gtccgtcgcc gccgccgagg aaaagctggc cgaagccgca ctggtcgccg
     2161 aaggctcgac cggcgagctc gaaggcaccg tgcgggtcac cgccagcagc atcgttgccc
     2221 actacgtgct gccgccgatc ctccgcgcca tccgccagga tttcgccgcc atcgccatcg
     2281 agctggtgcc gtccgactcg gtcgaaaacc tgctgttgcg cgaatccgac atcgccgtgc
     2341 gcatgttccg cccgacccag ctggagctca tcgccaagcg cctcggcgag gtgccgatcg
     2401 tcgccaccgc ccacgccagc tacctcggcc agcacggcac gcccgagacc gccgccgacc
     2461 tcggccgcca cgtcctcgtc ggcctcgacc gcgacgacca gatcctgcgc ggcgccaggg
     2521 ccctggggtt cgagctcaag cgcgccgact tcgcgctccg caccgacagc cagaccgcca
     2581 tgtgggaaat gctcaaggcc ggcctcggca tcggctttgc gcagctcggc ctcgtccgcg
     2641 acacgcccgg catgcgcgtc ctcctgccgg cgctgcagcc gccgccgctc gaggtgtggc
     2701 tcaccaccca ccgggaactg tttctcagcc cgaggattcg tgccatctat gaccgcctcg
     2761 cggccgggct cggcgactat gtcggccgtc tcgcccgtgg cgccgacagg accgagccat
     2821 gaacaaccag gtcgtcacca tcatcaccat cctcgcctgc ctggcggtgg cggggattct
     2881 gttcatgggc ctgtggaaca tgttcaaggg cggcgacgcc aaccgcagcc agatgctgat
     2941 gcgggcccgc gtcatcgccc agttcgtggc gctggtgatc ctgctcggtg ccctctactt
     3001 cttcggccgc ggaccgcagg gctgacgcgc gggatggtca agctcaacaa gatctacacc
     3061 aagaccggcg acgacggcac gaccgggctg gtgcgcggcc cgcgccggct caaatacgat
     3121 ctgcgcgtcg attgcttcgg caccgtcgac gaggccaatg ccgcgatcgg cgtggcgcgg
     3181 ctgtcgaccg tctcgatgcc caagatcgac aacatgctgg gccgcatcca gaacgacctc
     3241 ttcgacctcg gttccgacct cgcgacgccc ggcgccgatc ccgagggcgc gccgccggcg
     3301 ctgcgcatca cgccgcgcca gacgcagtgg ctcgagacca tgatcgacca gtacaacgag
     3361 ggcctggcgc cgctcgacag cttcgtgctg cccggcggca cggcgctgtc ggcggcgctg
     3421 cacgtggccc gcaccgtggt gcgccgggcc gagcgccagg tggtcgagct ggtgctcggc
     3481 gagccctcgg tcaacgccga ggcgatggtt tatctcaacc gcctgtccga cctgctgttc
     3541 gtcctcggcc gcgtcgccaa tgccaatggc aagaacgacg ttctgtggac ccccggccgc
     3601 tatggccatg actccaaagg tactccggag gatcgatcgt gagctacgtc cagtcggtga
     3661 tccagcccgg tgagcaggtg ctcgccaccg gccacatgca ctggatcgtc tatgcccgcg
     3721 gcctcgtcat cctggtcctg gcgctgatcg ccttcctgct tcccgcgcca tccggcttcg
     3781 gtgtcgtcct cgttatcgtc gccgtcctgc tgctggtcct ggcgctgctc gatctgttcc
     3841 gcgcctggtt cgtcaaggtg acgaccgaga tcgccgtcac caatctgcgc gtcatccaca
     3901 agcgcggctt catccgccgg gtgacgcagg agatgaacat gggcaaggtc gaatccgtca
     3961 acgtcgacca gaccctgctg ggccgcgcct tcgactacgg ctcgatcgtg gtgcgcggca
     4021 ccggttcggg catcgagggg ctcgactaca tcgcccaccc gctgcagctg cgcagcgcca
     4081 tcgtcgtcaa cgagggcgcc atcgccgccg ccccgccgcg tcagtagagc gaggggatcg
     4141 ccgcggtcgg cacgagcccg gtgaacacca cgccaccggc gatgttgacc gtctggctgt
     4201 aggagccatc ggccgcctgc ccgccgacga tcaccggctt cagctgcgcc ggaatgagat
     4261 cgcccagccg ctccaccacg cccttggaat tgagcttgag ctggccctcg acgcgcccct
     4321 gcgtgtcgag cccgagcgtg cccgtcgccg aaaaattgct gtcgccatcg tcgcccttga
     4381 agcccgcaag caggaacttg ccccctgccg cctgccagcg cttgaggaga gccggatcgc
     4441 cgtaggtccg gacgtcgtcg ggcaggtcgg tgaccctccc ctcgaacgtc gactcgcccg
     4501 aattgacctg gaagcccggc gcgctgagat ggtcgacctc ggcatattcg gccaccgagg
     4561 cgaggccggc cttggcgtcg tggtcctccg gcacgtcgac gagatgcgcc tccagatggt
     4621 cggccctggc gatcagctgg tcgtcgagca ccgtgtcgtt ccacaccggc gcctcgacca
     4681 ccaccgagat gcgcccgatg cgccagccgt cgagccgggc gctggcttcg gcgctcttga
     4741 agtccacccg gctctggctg ccggtgaagg cgtcggcgat gccgaccggc gactgcgcga
     4801 acaccagcac gtgcgtcgga tcgtacacca gcgccgtcgc cttgagcccg ctggccgtca
     4861 ccgtcgtatc ggccagcgtc accgtcgcgc cggtgcaggt gagatcgaag ccgaacggcc
     4921 agccgccgac gccgaagctc ttgcagctga gcttgggtgt cgtcaccccg tcggccgcct
     4981 ccagcgtctt ctcgtaggcg ctgatctgcc cggcgcccca gaaccacgcg ccggtccagc
     5041 cggcgacgac gagcacgatg acgatggtga ggatgatgag tcgggtcatg cggggtcttc
     5101 tagccgtgca ttcctgcccc gtcacccgca cgcttgccgc aacggcggcg cctcgctacc
     5161 aacggcctgc ggcaacagga aggcgcgatg gcggacacca atccctgggt cttcggctac
     5221 ggctcgctga tctggaaccc
//
LOCUS       DATAZA010000327         3766 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2008339, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000327 DATAZA010000000
VERSION     DATAZA010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3766
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2008339"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..305
                     /locus_tag="VHZ56_08280"
     CDS             <1..305
                     /locus_tag="VHZ56_08280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019170298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UDP binding domain-containing protein"
                     /protein_id="HEX4298008.1"
                     /translation="AFDPVAMAEAQRLYGDRPDLVLAPDKYAALEGADGLAICTEWQQ
                     FRAPDFDEMGRRLKSRTIFDGRNIFAPERLREEGWTYLSVGRPAVLPAPVAVGTAT"
     gene            302..1327
                     /locus_tag="VHZ56_08285"
     CDS             302..1327
                     /locus_tag="VHZ56_08285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase"
                     /protein_id="HEX4298009.1"
                     /translation="MKILVTGAAGFIGFHVARRLLARGDEVVGLDNVNAYYDPALKQA
                     RLRLLADDRGRWEFRRADITDAIALDACFAGHRFDRVIHLAAQAGVRHSIDNPLAYID
                     SNIVGFARLLEACRRHAVPHLTYASTSSVYGGNTRMPFSEADSADHPLQLYAATKRAN
                     ELMAHSYAHLYGLPATGLRFFTVYGPWGRPDMALFKFARAILNGEPIELYSEGRHSRD
                     FTYIDDVVEGVLRASDQVATPDPLWDSANPRPDRSDAPFRLYNLGRGAPVALEAYLDA
                     LETALGRRAIRHLLPPQPGDVPDTFADTRALAEATGYTPHTSVTEGVQRFAEWYVEHR
                     ALIEPAT"
     gene            complement(1356..1429)
                     /locus_tag="VHZ56_08290"
     tRNA            complement(1356..1429)
                     /locus_tag="VHZ56_08290"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1395..1397),aa:Gln,seq:ctg)
     gene            1765..2148
                     /locus_tag="VHZ56_08295"
     CDS             1765..2148
                     /locus_tag="VHZ56_08295"
                     /inference="COORDINATES: protein motif:HMM:NF021438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2147 domain-containing protein"
                     /protein_id="HEX4298010.1"
                     /translation="MKRTIQWLAAACLAALSTAPALAAGASPVGQWQVTTGEARYSVA
                     ACGDALCARLVWLRADARTDENLALLNKYVVRGAQPTATNQWSGDVTFAGHSYDGTMT
                     MVSRNFMTLKGCSGMLCQTYEFTRI"
     gene            2488..3486
                     /locus_tag="VHZ56_08300"
     CDS             2488..3486
                     /locus_tag="VHZ56_08300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA phosphatase family protein"
                     /protein_id="HEX4298011.1"
                     /translation="MYAALDLGTNNCRLLIARPHEQGFRVLDGFTRIVRLGEGLSASG
                     RLGDAAMDRTIEALKQCRNKLREHEPARMRLVATEACRAASNGAAFIARIRDEVGLEL
                     EIVDRQTEAALAVTGCADLIDEASDGALMFDIGGGSSELAWLDFRGGRPKRQGRMAAS
                     IRSWQSLPVGVVSIAERFGGVDVTPETFEAMVSFVAVQLRDFRGRGKLKQMIAEHPVH
                     LIGTSGTVTTLAGLHLGLERYERQKVDGLWMQRAEVDATMAALLAMPFDRRVSHPCIG
                     RDRADLVLPGCAIFEAIRREWPTERVRVADRGLREGILISLIDADRDGRRTGPGRR"
     gene            3486..>3766
                     /locus_tag="VHZ56_08305"
     CDS             3486..>3766
                     /locus_tag="VHZ56_08305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014891174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HEX4298012.1"
                     /translation="MVKTTNMGGGAGRRSERDLKVRVKTSKGRKIGSTLWLQRQLNDP
                     YVARAKAEGLRSRAAYKLIEINERYKLLHKGQRVVDLGAAPGGWSHVAAG"
BASE COUNT          572 a         1396 c         1238 g          560 t
ORIGIN      
        1 gggccttcga tccggtggcc atggccgaag cacagcgcct ctacggcgac cggcccgacc
       61 ttgtgctggc gcccgacaaa tacgccgccc tggagggggc ggatgggctg gccatctgca
      121 ccgaatggca gcagttccgc gctcccgatt tcgacgagat gggccgccgg ctcaagtcgc
      181 gcacgatctt cgacggccgc aacatcttcg cgcccgaacg gctgcgcgag gagggctgga
      241 cctatctcag cgtcggccgc cccgccgtgc tgccggcgcc ggtcgcggtc ggaaccgcga
      301 cgtgaagatc ctcgtcaccg gcgctgccgg tttcatcggc ttccacgtgg cgcgccggct
      361 gctggcgcgc ggcgacgagg tggtgggact cgacaacgtc aacgcctact acgatcccgc
      421 gctgaagcag gcccggctgc gcctgctcgc cgacgatcgc ggccgctggg agttccggcg
      481 cgccgacatc accgatgcca tagccctcga cgcctgcttt gccgggcacc gcttcgaccg
      541 cgtcatccac ctcgcggcgc aggccggagt gcgccacagc atcgacaacc cgctcgccta
      601 tatcgacagc aacatcgtcg gcttcgcccg cctgctcgaa gcctgccgcc ggcacgccgt
      661 gccgcatctg acctatgcgt cgacctccag cgtctatggc ggcaacacca gaatgccgtt
      721 ctcggaggcc gactccgccg accatccgct gcagctctac gccgccacca agcgcgccaa
      781 cgagctgatg gcgcacagct atgcgcatct ctacggcctg ccggcgaccg gcctgcgctt
      841 ctttaccgtc tatggtccgt ggggccggcc cgacatggcg ctgttcaaat tcgcccgcgc
      901 catcctcaac ggcgagccga tcgaactcta cagcgaaggg cgccacagcc gcgacttcac
      961 ctacatcgac gacgtcgtcg agggcgtgct ccgcgccagc gaccaggtcg ccacgcccga
     1021 tccgctctgg gacagcgcga atccgcgccc cgaccgcagc gatgcgccgt tccggctcta
     1081 caatctgggt cgcggcgcgc cggtggcatt ggaagcctac ctcgacgcgc tggagaccgc
     1141 cctcggccgc cgcgctatcc gccacctgct gccgccgcag ccgggcgacg tgcccgacac
     1201 cttcgccgac acgcgggcgc tggccgaagc caccggctac accccgcaca ccagcgtcac
     1261 cgaaggcgtc cagcgctttg ccgaatggta tgtcgaacac cgtgccctga tcgagcccgc
     1321 aacttagccg cgaagatcgc gtgggactgc agcggtggct ggggaacctg gattcgaacc
     1381 aagattgacg gagtcagagt ccgtagttct accgttgaac tattccccaa tggccggtcg
     1441 gcgagggccg gtcgcaaagg tttgatcggg cggcaggggc cgcgggtcga tcgcacgggc
     1501 tgccttctag cggcattcgc gaaggcgatc aacacccgcc cggcgtcaac catagccgca
     1561 gaatccgggc tttcgcgaca atctgtcgcc tgccggcaag ccgtccaggg gctctactgc
     1621 cttcggctcg ccttgttcgc cgcccatctg ggtgactgaa ctttcggggc cttgtccccg
     1681 ttgacggata actggtgctc gcccgcctcg atccgtccct cacaacacca gatcgagccg
     1741 gcctcagccg gccacaggaa gatgatgaaa cgcaccatcc aatggcttgc cgcggcctgt
     1801 cttgcggccc tctcgactgc accggccctt gccgccgggg cttcccctgt cggccagtgg
     1861 caggtcacca ctggcgaagc ccgctactcg gtagcggcct gcggcgacgc cctctgcgcc
     1921 cggctggtct ggctgcgcgc cgatgcgcgt accgacgaga acctggcgtt gctcaacaaa
     1981 tacgtggtgc gcggcgccca gccgacggcc accaaccagt ggtccgggga cgtgacgttc
     2041 gccggccaca gctatgacgg caccatgacc atggtcagcc gcaatttcat gacgctcaag
     2101 ggctgctccg gcatgctctg ccagacttat gagttcacgc gtatctgacg gacgcgcgcc
     2161 gctggcagcc cgagcgctcc ggccacacgg ccggggcgct ttgcttttga cacatgccgc
     2221 cggcttgccc taagctttcc gcgacgtttg aacaggctgc gcctgggcgc cggcggctct
     2281 tcccgccagg cgactgcgcc gcaaggaagt gggcgagtga ccgaagagga tcggtctgcc
     2341 gccgcagccg cgcccccggg cgcggatcct gccgggggcc gcgcgcccga ccggctggac
     2401 gcccgcggcg gggcgcgatc ccggcgcggc gatgcggaga ggcggacaga aggcgccgag
     2461 actccgccgc gccgctcgcg cgggccggtg tacgccgcgc ttgacctcgg caccaacaat
     2521 tgccgcctgc tgatcgcccg cccgcatgag caggggtttc gcgtcctcga cggtttcacc
     2581 cgcatcgtcc ggctgggcga gggtctctcg gccagtggac ggctcggcga cgccgcgatg
     2641 gaccgcacca tcgaggcgct caagcagtgc cgcaacaagc tgcgcgagca cgagccggcg
     2701 cgcatgcgcc tcgtcgccac cgaagcctgc cgcgccgcca gcaatggcgc cgccttcatc
     2761 gcgcgcatcc gcgacgaggt cggcctcgag ctcgagatcg tcgaccggca gaccgaggcc
     2821 gcgctcgcgg tcaccggctg cgccgacctc atcgacgagg cgagcgacgg cgcactgatg
     2881 ttcgacatcg gcggcggctc gtcggaactg gcgtggctcg atttccgcgg cggccggccg
     2941 aagcggcagg gccgcatggc cgcctccatc cgttcgtggc agtcattgcc ggtgggcgtc
     3001 gtgtcgatcg ccgagcgctt cggcggcgtc gacgtcaccc ccgagacctt cgaggcgatg
     3061 gtgagcttcg ttgccgtcca gctgcgcgac ttccgcggcc gcggcaagct caagcagatg
     3121 atcgccgagc acccggtgca cctgatcggc acctccggca cggtgacgac gctcgccggg
     3181 ctgcacctcg ggctcgagcg ctacgagcgc cagaaggtcg acggcctgtg gatgcagcgc
     3241 gccgaggtgg acgcgaccat ggcagcgctg ctcgccatgc cgttcgaccg ccgcgtcagc
     3301 catccctgca tcggccgcga tcgcgccgac ctcgtgctgc ccggctgcgc catcttcgag
     3361 gcgatccgcc gcgagtggcc caccgagcgc gtgcgcgtcg ccgaccgcgg cctgcgcgag
     3421 ggcatcctga tctcgctgat cgacgccgac cgcgacggcc ggcgcactgg cccgggacgg
     3481 cgctgatggt caagaccacc aacatgggcg gcggcgccgg ccggcgttcc gagcgcgacc
     3541 tgaaggtccg cgtcaagacc tccaagggcc gcaagatcgg ctcgaccctg tggctgcagc
     3601 gccagctcaa cgatccctac gtcgcccgcg ccaaggccga gggcctgcgc tcacgggcgg
     3661 cctacaagct catcgagatc aacgagcgct acaagctgct gcacaagggc cagcgcgtcg
     3721 tcgaccttgg cgcagcgccg ggcggctgga gccacgtggc cgccgg
//
LOCUS       DATAZA010000328         2148 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2820255, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000328 DATAZA010000000
VERSION     DATAZA010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2820255"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(148..432)
                     /gene="rpmB"
                     /locus_tag="VHZ56_08310"
     CDS             complement(148..432)
                     /gene="rpmB"
                     /locus_tag="VHZ56_08310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEX4298013.1"
                     /translation="MARRCELTGKGVMVGNNVSHALNRTKRRFLPNLLHVSLISDALG
                     RTVKLRISAHALRSVEHRGGLDAFLVKAADDDLSPNALALKREVRAALAA"
     gene            631..1413
                     /locus_tag="VHZ56_08315"
     CDS             631..1413
                     /locus_tag="VHZ56_08315"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HEX4298014.1"
                     /translation="MSRLFHALCAAAVLGVAGAAPAWADTTASASYVINLGGTIIATA
                     KFTLTDAGGNYDLALNADVTGVASLVASGTAKASSTGTVTAAGLRSSSFDLTTHSGGQ
                     DFSDTVQYTAGNVSAFIVDPPIVNNLNRVPIERSQLSGVNDMMAAFVLKAGALDKSLC
                     DQHDHIFTGIERFDLDFSYAKDDTATSPRTGYQGPVVLCHVKYKPISGHYTTSQLTNS
                     LAQDDRILIWYAPLKATGYFIPYRVLLTTSMGDLSLVLTSLN"
     gene            complement(1414..>2148)
                     /locus_tag="VHZ56_08320"
     CDS             complement(1414..>2148)
                     /locus_tag="VHZ56_08320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017273785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HEX4298015.1"
                     /translation="PGESSKSWRLVELARVDLEKAGLVTEVLDLSRLTSEYGRNIHPC
                     KACFSTAAPLCHWPCSCYPNYSLGQTQDWMNEIYPMWVRAHGIMIVSPVNWYAPTSPI
                     KLMMDRLVCADGGNPDPTSTHGKTATEAKAIELAGWDYPRHLKGRLYSVIVHGDVEGA
                     ENVRRSLSDWLRFMQMEAAGPKAELDRYIGYWQPYATSHEALDADLEMQGEVRQAAAT
                     LAEALKAQHEGRRIIAGAWLTAPRQK"
BASE COUNT          352 a          764 c          670 g          362 t
ORIGIN      
        1 cgcatcacgc tcatctccga caacaacttc aacgactggg aacggacgct gctgctggag
       61 ttcgcgctcg caccggactg atcgcggccg gcaaaacaaa aatgcccgct tgcgcgggca
      121 tcgtcgtcgg caccgatgaa ctgcagctta ggccgcgagg gcggcccgca cttcgcgctt
      181 cagcgccagc gcattcggcg acaggtcgtc gtccgccgcc ttgaccagga acgcgtcgag
      241 cccgccgcga tgctccaccg agcgcagcgc atgcgccgag atgcgcagct tgaccgtgcg
      301 gcccagcgcg tcggagatca gcgacacgtg cagcaggttg gggaggaagc ggcgcttggt
      361 gcggttgagg gcgtggctca cattgttgcc aaccatcaca cccttgccgg tcagttcgca
      421 gcggcgtgcc atgagcgaaa tcctgtcaaa acggcccggc ggcgggaatt tcccgcatcg
      481 ggcgctggtc ttctcgtgat tgaggcgctt ccatagagaa accgggcttt ggcgtcaagc
      541 cgacgccttg cgcccccgcg gacgccaagg cagtttgggc ccttgccgcg attcgccccc
      601 tccggggccg ttcgagcccg agggtccacg atgtcccgcc tgttccacgc gctctgtgcc
      661 gccgccgtgc tgggggttgc cggcgccgct ccggcctggg ccgacaccac cgcgagcgcc
      721 agctacgtga tcaacctcgg cggcaccatc atcgccaccg ccaaattcac cctgaccgat
      781 gccggcggca attacgacct ggcgctgaac gccgacgtta ccggcgtggc gtcgctggtg
      841 gccagcggca ccgccaaggc ctcctcgacc ggcacggtga ccgccgcggg cctccggtcc
      901 agcagcttcg atctcaccac ccactcgggc ggccaggact tttccgacac cgtgcagtac
      961 accgccggca atgtgtcggc cttcatcgtc gatccgccga tcgtcaacaa cctcaaccgc
     1021 gtgccgatcg agcgcagcca gctcagcggc gtcaacgaca tgatggcggc gttcgtgctg
     1081 aaagccggcg cactcgacaa atccctctgc gaccagcacg accacatctt caccggcatc
     1141 gagcggttcg acctcgattt cagctatgcc aaggacgaca ccgcaacctc gccgcggacc
     1201 ggctaccagg ggccggtggt gctttgccac gtcaagtaca agccgatctc ggggcactac
     1261 accacgtcgc agctcaccaa ctcgctggcc caggacgacc gcatcctgat ctggtacgcc
     1321 ccgctgaagg cgaccggcta tttcatcccc taccgggtgc tgctgaccac ctcgatgggc
     1381 gacctgtcgc tggtgctgac cagcctcaac tgatcatttc tgccgcggcg cggtgagcca
     1441 ggcaccggcg atgatgcgcc ggccctcgtg ctgcgccttc agcgcctcgg ccagcgttgc
     1501 cgctgcctgc cgcacctcgc cctgcatctc gaggtcggcg tcgagcgcct cgtgcgaggt
     1561 ggcatagggc tgccagtagc cgatgtagcg gtcgagctcg gccttcggac ccgccgcctc
     1621 catctgcatg aagcgcagcc agtcgctgag cgagcggcga acattttcgg cgccctcgac
     1681 gtcgccgtgg acgatcaccg aatacagccg ccccttgagg tgccgtggat agtcccagcc
     1741 ggcgagctcg atcgccttgg cctcggtcgc cgtcttgccg tgcgtcgagg tcgggtccgg
     1801 attgccgcca tcggcgcaca ccagccggtc catcatcagc ttgatcggcg aggtcggcgc
     1861 gtaccagttg accggcgaga cgatcatgat gccgtgcgcg cgcacccaca tcggatagat
     1921 ctcgttcatc cagtcctgcg tctggccgag cgagtagttc ggatagcacg agcacggcca
     1981 gtggcagagc ggtgcggccg tcgaaaagca tgccttgcat ggatggatgt tgcgcccgta
     2041 ctccgaggtg agccggctga ggtcgagcac ttcggtgacc agcccggctt tctcgaggtc
     2101 gacgcgcgcc agctccacca ggcgccacga cttcgagctt tcgcccgg
//
LOCUS       DATAZA010000329         1558 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1891536, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000329 DATAZA010000000
VERSION     DATAZA010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1891536"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..693)
                     /locus_tag="VHZ56_08325"
     CDS             complement(<1..693)
                     /locus_tag="VHZ56_08325"
                     /inference="COORDINATES: protein motif:HMM:NF024912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthetase B"
                     /protein_id="HEX4298016.1"
                     /translation="MAGCWRHDGGPVDPAEIAQLLAPIVHRGPDDSGIWMQGQVGLGH
                     RRLSIIDLSAAGHQPMLTPDGGSVLSYNGEIYNYRELRAELERAGAEFRGHSDAEVLL
                     WALHLWGPEQAIPRLNGMFAFAYYDARTKALWLARDRLGIKQLYIHETEREVHFASEV
                     KALRALDRLQIDIDREAVRRRFLGLVRGHSSLYGNVGGLPPGSWWRIDRDGIRRHRYF
                     DIESSLDADRLIA"
     gene            881..>1558
                     /locus_tag="VHZ56_08330"
     CDS             881..>1558
                     /locus_tag="VHZ56_08330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000976 - transcription cis-regulatory
                     region binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX4298017.1"
                     /translation="MRGSRRRTIVDVAERAGVSKSTAARALSGGVEISDATRDKVLTA
                     ARALGYERNHLAVGMRSGRSGLLGLVIPDIANPFWAEVARGAQDRAVEAGASLLVFSS
                     DWDHAREARHLTALRQARVDGAIINPVADSFDDLDRFGLPFVLIGSSAERFPETSSVG
                     SDIAQAVRLGLDHLVARGHPRPALIVGPRWRIARARFLRAVFDHCVARDVDPATLPME
                     EGEYTVEG"
BASE COUNT          230 a          545 c          528 g          255 t
ORIGIN      
        1 ggcgatgagc cggtcggcgt cgaggctgct ttcgatgtcg aagtagcggt gtcgcctgat
       61 gccgtcgcga tcgatccgcc accagcttcc gggcggcagt ccgccgacgt tgccgtagag
      121 actggaatgc ccccgcacga ggccgaggaa gcggcggcgg accgcctcgc gatcgatgtc
      181 gatctgcagc cggtcgaggg ctcggagcgc ctttacctcc gacgcaaaat gcacctcgcg
      241 ttcggtctcg tggatataaa gctgcttgat cccgagccgg tcgcgcgcca gccacagcgc
      301 cttggttcgc gcgtcgtaat aggcaaaggc gaacatcccg ttgaggcgcg gaatggcctg
      361 ctccggcccc cacaaatgca gcgcccacag cagcacctcg gcgtccgaat ggccgcgaaa
      421 ctcggcgccc gcccgttcga gttcggcgcg caactcacga tagttgtaga tctctccatt
      481 gtacgagagg acgctgccac cgtcgggggt cagcatcggc tgatggcctg ccgccgacag
      541 gtcgatgatc gacagccgcc ggtggccgag cccgacctgt ccctgcatcc agatgccgga
      601 atcgtcgggg ccgcgatgca cgatcggcgc cagcaactgc gcgatctcgg ccggatcgac
      661 cggccccccg tcatgccgcc agcatccggc cacgccgcac atcgcccctc cgaccgtcgc
      721 ccacgcgatg ccaaccctac tgtatccccc agcggctggc gatgcggtgt tcgctgcgtt
      781 ccacatcgag cggtgcaggg catcgtcggc tggattgcca tttgcaaccg tgtccggtaa
      841 cgttcccgga aatcgcagca acgtctgcgg ggagagatct gtgcgcggga gccgtcgccg
      901 gacgattgtc gatgtcgcgg agcgggccgg cgtgtccaag agcacggccg cgcgcgcgct
      961 ttcgggcggc gtcgagatca gcgacgccac ccgcgacaag gtgctgactg ctgcccgcgc
     1021 cctcggctac gaacgcaacc acctggcggt ggggatgcgc tcgggacgct ccggcctgtt
     1081 gggcctggtc atccccgata tcgccaatcc gttctgggcc gaggttgccc gcggcgcgca
     1141 ggaccgtgcg gtcgaggcgg gcgcctcgct gctggtgttt tcgtccgact gggaccatgc
     1201 gcgcgaggcc cggcacctga cggcgctgcg gcaggcccgg gtggacggcg ccatcatcaa
     1261 cccggtggcc gacagtttcg acgacctcga ccgcttcggg ctgcccttcg tgctgatcgg
     1321 ttcgagcgcc gagcgctttc ccgaaacctc gagcgtcggc tcggacatcg cgcaggcggt
     1381 gcggctcggc ctcgatcatc tggtggccag gggccatccg cgcccggcgc tgatcgtcgg
     1441 accgcgctgg cgcatcgccc gcgcgcggtt cctccgggcg gtgttcgacc attgcgttgc
     1501 ccgcgacgtc gatccggcca ccctgccgat ggaggagggc gaatacaccg tcgagggc
//
LOCUS       DATAZA010000330         1961 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3634125, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000330 DATAZA010000000
VERSION     DATAZA010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3634125"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..506)
                     /locus_tag="VHZ56_08335"
     CDS             complement(<1..506)
                     /locus_tag="VHZ56_08335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298018.1"
                     /translation="MGFALAGAATLTLLTAAPALSQGLSSSSLIGAVPLAIALGAGAF
                     ALLAMAVVRTMVRDGRQAQQRAAGRIADLRAQVDEYEALLSGTGEITVVWGGKATGPK
                     FLGPASAALAPGRRVDAILDFPSWLGASDAALLAERLTALRSGGQGFDLPLLARDGRQ
                     MRALGWALG"
     gene            complement(891..1391)
                     /locus_tag="VHZ56_08340"
     CDS             complement(891..1391)
                     /locus_tag="VHZ56_08340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006199714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX4298019.1"
                     /translation="MDSKVIHLTDGFTGTLGLLGVRSLLPGLDTAGHFSLVEHPMPPR
                     ALGAPLHRHSREDEVSIVLEGEVGAMLGDDVMVGRPGEVILKPRAQWHAFWNAGDAPA
                     RLIEIISPAGFEHYFRELIELGGPSNASPATLRALYEKYGLEMDRSSVPMLTERFGLR
                     LAPVAG"
     gene            complement(1427..>1961)
                     /locus_tag="VHZ56_08345"
     CDS             complement(1427..>1961)
                     /locus_tag="VHZ56_08345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HEX4298020.1"
                     /translation="MDGFEVVTLEDAAHRADIVVSATGNKDIITVDAMRAMKDMAIVC
                     NIGHFDNEIDVAGLRNFKWTNVKPQVDIVELSSGKRIVLLSEGRLVNLGNATGHPSFV
                     MSASFSNQTLAQIELFTNGKTLEKKVHVLPKHLDEKVAQLHLAKLGAKLTTLTKPQAD
                     YIGVPQHGPFKSDQYRY"
BASE COUNT          331 a          688 c          634 g          308 t
ORIGIN      
        1 ccgagcgccc agccgagggc gcgcatctgc cgcccgtccc gggcgagaag cggcaggtcg
       61 aagccctggc cgccgctgcg cagcgccgtc agccgttccg ccagcagcgc ggcgtcgctc
      121 gcaccgagcc acgacggaaa atcgaggatt gcatcgacgc gccgcccggg cgccagcgcc
      181 gccgaggccg gcccgaggaa tttcggcccc gtcgccttgc cgccccacac cacggtgatc
      241 tcgccggtgc ccgacagcag cgcctcgtac tcgtcgacct gggcccgcag atccgcgatc
      301 cgcccggcgg cccgttgctg cgcctgtcgg ccgtcgcgca ccatggtacg caccacggcc
      361 atcgccagca gcgcgaaggc cccggcgccg agcgcgatgg cgagcggcac cgccccgatc
      421 aagctggagg agctgaggcc ctggctgagg gccggcgcgg cggtgaggag cgtcagggtg
      481 gccgcgcccg caagcgcgaa tcccaatcgt ctccggaatc cgtccggccg catgcgtcac
      541 cccgcaaaaa gaattgaacc gccaccgccc tgccgagcgg gcaggcacat caaccgccgg
      601 aaaacgcagg cgtacccagg gcgcgccgcg gcgagtggag tcccactctt gccgtcacga
      661 cgcgcgcgca cacaaccacc atgaggccca aactggcccc agaccgtctt tgcccgctgc
      721 gtccccgcct tctggcgcgg ctgcgggctg cccccgaatc acccaaccat agcgatggcc
      781 ggacgcgcga aaaagagtcc tcgtgggtgt gcattgcggg caaatgaccc gcgccgggga
      841 ttgaccgcgg tccgaacggt gaacaattgg ttaacggagg ccgccgccgc ttatcccgcc
      901 accggcgcga ggcggaggcc gaagcgctcg gtcaacatcg gaaccgaaga tcggtccatc
      961 tccaggccgt atttctcgta gagcgcgcgg agcgtcgccg gcgacgcgtt cgaggggccc
     1021 ccaagttcga tcagttcgcg gaaatagtgc tcaaacccgg ctggcgagat gatttcgatg
     1081 agccgcgccg gagcgtcacc cgcgttccag aaggcatgcc actgtgcgcg cggcttgagg
     1141 attacctcgc caggccgccc gaccatcaca tcgtctccca gcatggcgcc cacctcgcct
     1201 tcgagcacta tgctgacttc gtcttcccgc gaatgccggt gcaaaggcgc cccgagcgca
     1261 cggggtggca tgggatgctc gaccagcgag aaatggcccg cggtatcgag cccgggaagc
     1321 agtgatcgga cgcccaaaag ccccagggtg cctgtaaagc catcggtaag atggatcacc
     1381 ttggaatcca tgtcgcctcc gtgcgcgccg cgcgagcgcg tctgccctaa taccggtact
     1441 ggtcggactt gaacgggccg tgctgcggca cgccgatgta gtcggcctgc ggcttggtca
     1501 gcgtcgtcag cttggcgccg agcttggcca gatgcagctg cgccaccttt tcgtcgaggt
     1561 gcttgggcag cacgtggacc ttcttttcca gcgtcttgcc gttggtgaag agctcgatct
     1621 gcgccagcgt ctggttggag aacgaggcgc tcatcacgaa gctcggatgc ccggtggcat
     1681 tgccgagatt gaccagccgg ccctcgctca gcagcacgat gcgcttgccg gaactcagtt
     1741 ctacgatgtc gacctgcggc ttgacgttgg tccacttgaa attgcgcagg ccggcgacgt
     1801 cgatctcgtt gtcgaagtga ccgatattgc agacgatcgc catgtccttc atggcgcgca
     1861 tcgcatcgac ggtgatgatg tccttgttgc cggtggcgct gaccacgatg tcggcccggt
     1921 gtgccgcgtc ctccagcgtc accacctcga agccgtccat c
//
LOCUS       DATAZA010000331         2422 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2242978, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000331 DATAZA010000000
VERSION     DATAZA010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2422
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2242978"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1299)
                     /locus_tag="VHZ56_08350"
     CDS             complement(<1..1299)
                     /locus_tag="VHZ56_08350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018697695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEX4298021.1"
                     /translation="MSWRLLLVPAVTTALLCSSAFADDQPGSTASDGSQAWYTFAGQL
                     NAQKYATADQITPDNVGKLGVAWQMHTGDVSDGKDPNGPKASDWGATPLFVNDTLYVS
                     TVFDRIFAIEPDTGKVKWTFDTHTKLVDPTQGELKNRGLSYWQAATPTAGQPCQKVIY
                     LGTMDGKIFAVDADSGQACSGFGQNGVLDINQWNTVNNKWPLSILQPPTVYKNQLFVG
                     WSGQDWTQAVQPPGSLFAIDAQTGKLNWKFDAIPPDLDPKTGTSNVWSSMSVDTKNNL
                     LFIPISSPSPDYYGGDRTAPMPLSTSVTALNPDTGAVVWSYQIVHHDIWDYDTNSAPV
                     LFDLQQNGQTVPALIQSSKMGLLYVLNRLTGKPIFPIDEKPVPASDIQGEQASPTQPW
                     PTTPQATTPDQFPGVSWLADAMSGGYCSRTMAGLRYEGRFT"
     gene            complement(1305..1691)
                     /locus_tag="VHZ56_08355"
     CDS             complement(1305..1691)
                     /locus_tag="VHZ56_08355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298022.1"
                     /translation="MTDRPLAVRTRTDFGATALLILALLALIDSIFNYFFTGNGIHGT
                     EGALLVIVSTLLLLIAAGLVGMRRVHSGWRTLLEVLMLLDFIGTAAAAYLLEAWILLA
                     LIVLGFIAWVIHVARPSSSRPASNLG"
     gene            1878..>2422
                     /locus_tag="VHZ56_08360"
     CDS             1878..>2422
                     /locus_tag="VHZ56_08360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012653574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298023.1"
                     /translation="MTQPDLMTPDFARNMRIIGYSDQGGRPDGVQIMVQDGFAYVGHQ
                     FSDGFSVIDVRDPRHPKTVNYVPSPPNTWTIHLQAHDDLLLVINCLNFYREEHLTNEA
                     VYYSGSMAEKTQASRGYSAGIRVYDIKDRANPREIGFMPIDGVGVHRIWYAGGRWAYA
                     SALLDGFIDAVMITIDMADPT"
BASE COUNT          424 a          727 c          859 g          412 t
ORIGIN      
        1 cgtgaagcgg ccctcgtagc gcagccccgc catggtgcgg ctgcagtagc caccgctcat
       61 cgcatcggcc agccatgaga cgcccgggaa ctggtcaggc gtcgtagcct gcggcgtcgt
      121 cggccagggc tgggtcggcg aagcctgctc gccctggatg tcggaggccg ggacgggctt
      181 ttcgtcgatc gggaagatcg gcttccccgt cagccggttg agcacataga ggaggcccat
      241 cttgctcgac tggatcagcg ccggcacggt ctggccgttc tgctgcaggt cgaacagcac
      301 cggggcggag ttggtgtcgt agtcccagat atcgtggtgg acgatctggt agctccagac
      361 cactgcgccg gtatcgggat tgagcgccgt caccgaagtg gaaagcggca tcggcgcagt
      421 gcggtcgccg ccgtaatagt cggggctcgg cgagctgatg gggatgaaca gcagattgtt
      481 cttggtgtcg accgacatcg acgaccagac gttggaggtg ccggtcttgg gatcgaggtc
      541 gggcgggata gcgtcgaact tccagttgag cttgccggtc tgggcgtcga tggcgaacag
      601 cgagcccggc ggctgcacgg cctgggtcca gtcctgcccg gaccagccga cgaacagctg
      661 gttcttgtag accgtcggcg gctgcaggat cgacagcggc catttattgt tgacggtgtt
      721 ccactggttg atatcgagaa cgccgttctg gccgaagccg ctgcaggcct ggccgctgtc
      781 ggcgtcgacg gcgaagatct tgccgtccat ggtgccgaga tagatgacct tctggcatgg
      841 ctggccggcc gtcggggtcg ccgcctgcca gtaggaaagg ccgcggttct tgagctcgcc
      901 ctgggtcgga tcgaccagct tggtgtgggt atcgaacgtc cacttcacct tgccggtgtc
      961 gggctcgatg gcaaagatgc ggtcgaacac ggtcgagacg tagagcgtgt cgttgacgaa
     1021 cagcggcgtc gcgccccagt cggaggcctt gggcccgttg ggatccttgc cgtcggagac
     1081 gtcgccggtg tgcatctgcc aggcgactcc gagcttgccg acattgtccg gcgtgatctg
     1141 gtcggcggtc gcgtatttct gggcattgag ctggccggcg aaggtgtacc aggcctggct
     1201 gccgtcgctg gcggtcgagc cgggctggtc gtcggcgaat gcggatgagc agaggagcgc
     1261 cgtggtgacg gcggggacga ggagcaggcg ccaggacata tgggctaacc gaggttggag
     1321 gcgggacggg aagacgacgg ccgggcgacg tggatcaccc aggcgatgaa gccgaggacg
     1381 atcagggcga gaagtatcca ggcctcgagg aggtaggcgg ccgccgcggt gccgatgaag
     1441 tcgagaagca tcagcacctc gagcagcgtc cgccagccgc tatgcaccct gcgcatgccg
     1501 acgaggccgg cggcgatcag cagcagcagc gtcgagacga tgaccagcag ggcgccctcg
     1561 gtgccgtgga tgccgttgcc ggtaaagaaa taattgaaga tggagtcgat gagagcgagc
     1621 agggcgagga tcaacagcgc ggtcgcgccg aaatcggttc gtgtgcggac ggcaagggga
     1681 cgatcggtca tggcgcgggg tccaggacgc gcttcggatg gcgcgtttcg agcaggaaac
     1741 cgacacaaac ggaaaatcgt tccaccaccg caggccggcg tcgaatttgt cacatggccg
     1801 cgggggctta ccgcgctgcg cccgacgcgc tagtagggct gcggccgcaa ccccggccga
     1861 tagagtagga gcccgcggtg acccagcccg acctcatgac ccccgacttt gcccgcaaca
     1921 tgcggatcat cggctattcc gaccagggtg gccggccgga cggcgtgcag atcatggtgc
     1981 aggacggctt cgcctatgtc ggccaccagt tctccgatgg cttctcggtc atcgacgtgc
     2041 gcgatccgcg ccaccccaag accgtcaact acgtgccgag cccgcccaac acctggacca
     2101 tccatttgca ggcgcacgac gacctgctgc tggtgatcaa ctgcctcaat ttctatcgcg
     2161 aggagcacct caccaacgag gcggtctact actccggctc gatggcggag aagacgcagg
     2221 cgtcgcgcgg ctattcggcg ggcattcgcg tctacgacat caaggaccgg gccaacccgc
     2281 gcgagatcgg cttcatgccg atcgacggag tgggcgtgca ccgcatctgg tatgcgggcg
     2341 gccgctgggc ctatgcctcg gcactgctcg acggcttcat cgacgcggtg atgatcacca
     2401 tcgacatggc cgatccgacc ca
//
LOCUS       DATAZA010000332         8255 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_269523, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000332 DATAZA010000000
VERSION     DATAZA010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 8255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8255
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_269523"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            44..907
                     /gene="argF"
                     /locus_tag="VHZ56_08365"
     CDS             44..907
                     /gene="argF"
                     /locus_tag="VHZ56_08365"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEX4298024.1"
                     /translation="MLAVATELKARLKRGERPSLLPDKMLAMIFEKQSTRTRVSFDVG
                     MRQLGGETMFLSGDSMQLAREETLADTARVMSRYVDAIMIRILDHDDLLDLAGASSIP
                     VINGLTRRAHPCQVMADIQTFEEHRGPIKGAKVAWVGDANNVLASWVHASRLFGNKFA
                     IACPDEYGPDQGLLADIKEAGPNVTLGEDPLVAVKDADLIVTDTWVSMGDTDVSDRRK
                     TLKPYRVDTNLMGLADSDALFMHCLPAHRGDEVTDEVIDGPQSVVFDEAENRLHAQKA
                     ILCWCFGIDTV"
     gene            908..1912
                     /locus_tag="VHZ56_08370"
     CDS             908..1912
                     /locus_tag="VHZ56_08370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone"
                     /protein_id="HEX4298025.1"
                     /translation="MPELQLADYGLDRAESGDDVVVPFTLEQLDSRGRVVRLGEALDA
                     ILTRHNYPAPVARLLGEAVVLAALIGSSLKFQGKFILQTQTDGPVNLIVVDLDAPDGL
                     RGYARFDADAVRHAVETGATQPGQLLGKGHLAMTVDQGVHMERYQGIVALEGGSLEDV
                     AHTYFQQSEQVPTLVRLAVAQLSRKGERQPHWRAGGVLVQHLPPHGARTMPDLPGDGD
                     FSNPATADASFAESEKWTTTRALLATVADDELADPDVSAERLLFRLFHETGVRVFAPV
                     PLEERCTCSAERIEAMLRDNFSAGERADMVVNGEIEVICEFCSADYHFQPHEFDGTKH
                     "
     gene            2043..3422
                     /locus_tag="VHZ56_08375"
     CDS             2043..3422
                     /locus_tag="VHZ56_08375"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX4298026.1"
                     /translation="MEQEKIDVTRAVPVSEQSATPQRPVRRGAPIWLQLILTLVVLVI
                     ALGVAGLFLPSANAMLANVGVRLPLLNSAAGAGPAAAPQAQAKGQAQGARQGQGTGQG
                     AGARGGAGAGGSRVAVVVAAAATTGIINNKLTSIGEGVAVKSVTVNPQSAGTLMSVDV
                     KAGDAVKAGTKLATLDAGTQQIAYDKAMLASQDADAALVRAQALSKTQALSDSQLATA
                     QLASAQAKLAVSDAKLTLDQRTITTPVDGIVGLIQVTPGNLVSTQTVVTTIEDASQIL
                     VNFWVPERYSGQMSVNLPAAAESDALPGRTFNGTIDAVDNKIDPTSRTLQVQATLPNN
                     DGTIKPGMSFTVDMSFPGETFPDVDPLSIQWSNTGAYVWKVVDGKVVKGMVEIIQRNS
                     DGVLVKGDVKPGDQIVTQGVLQLTDNAPVRLLDAGAAAAQNKPASGDAAASAPAGQAS
                     SQPAASSQG"
     gene            3430..6558
                     /locus_tag="VHZ56_08380"
     CDS             3430..6558
                     /locus_tag="VHZ56_08380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015397659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX4298027.1"
                     /translation="MSIQAQNERGGQIAGLFVRRPVLAVVINALIVVGGLAAFLGIEV
                     RELPEVEQPVLTITTTFDGASADTIDKEITSVIEGAVARVQGVVGISSGSSYGRSQVT
                     LTLADGTNLDSATSDVRDATARVVAKFPDGVDPPTIVKADPNAQAIMQLSVTSDSMSR
                     DDMTTLVDNTITERLSAVPGVADLQIYGEQAKVFTIDVDQTKLASLGLTVGNVQTALA
                     TIAFDTAAGTMNGANQNITVHAIADVTTPADFENIIIDGRTRLGDVARVVFGPASSAS
                     GLHSDGKSGIGIGIIRAAESNTIQISDGVYKAIDELKTQIPSSVTIKVSSDDSIFIAG
                     ALREVERSLGLAVVIVIAVIFLFLMDWRATLVPAISMPVALIGAIAGIYLAGFSLNIL
                     TLLAIVLATGIVVDDSIVVLENIVRRRGMGAGPRAAAVLGTQEVFFAVIATSLTLIAV
                     FVPLSFLPGQTGRLFREFGFTLAMCVGLSCLVALSLGPMLASRLLGHHDAKIHRNPIA
                     GLGRALARLYGVLLRFCLDTPMVVIVIAVLFAGSAVFVFGSIRQELTPPEDRAAVLIR
                     VSAPPTVSLDFTQTEMQKIEDLVQPLVKSGDVKSIFSVSGFGSNTSNGFMSLTLAPWD
                     QRTRSQQQITAQVNQLLQQVPGVQTQIIQPNSLGIRGGGNGLQFAVAGSDYTELNATA
                     QKIVDQMNQDPRFGRVTINYNATTPEMTVAIDRDKAAALGVDITNLGTTLQAMIDGAQ
                     IGQVFVEDSSYPVRILSTTQPVNDPSDLENIFLKTADGKYVPMSSVATLTESPIAPQL
                     TREQQRRDVSVTATLDGLALGDAYQRVLQIAGPILPAGDVVLPLAEAKTIGDSNYGLA
                     ITFGFAIIVVLLVLSAQFESAFAAVIVMVTVPFGLACAVYAVLFTGGSLNVYSQIGLI
                     MVVGIMAKNGILIVEFANQLRDRGLGVREAIEESANIRLRPVLMTMIATVLGGVPLVI
                     SSGAGAEARQALGWIIVGGLGFAAISTLFLTPVAYLLLARFSKPKAHEQERLQNELDS
                     AGQAALAAAPAE"
     gene            6622..7320
                     /locus_tag="VHZ56_08385"
     CDS             6622..7320
                     /locus_tag="VHZ56_08385"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011425952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEX4298028.1"
                     /translation="MPQTDPAGVAAVRRGLISLAITLIGMAVLLFVPAGTVGWPIGWW
                     FCVAFVVCILISIVTIWRLNPEIFVARSRIQPGTKRWDYVFIVLILTGFMAVLPVAGL
                     DDRFGWSSMPIWVIVLGYVVFLLSFADQIWALAVNRHFEPGVRIQQDRGQTVIDTGPY
                     AIVRHPGYVGGVTLGVGMALMLGSWWSLVPVLVLGGATAVRTLFEERTLREGLPGYVE
                     YTQRVKWRWVPGVW"
     gene            complement(7325..>8255)
                     /locus_tag="VHZ56_08390"
     CDS             complement(7325..>8255)
                     /locus_tag="VHZ56_08390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX4298029.1"
                     /translation="TGMSAVTNAVMSQVRAGDHIVAARALFGGCRYVIEDLMPRFGVP
                     STLVDGRDPANFEKAMRPNTKLVFIETPTNPTLELVDIRAVADIAHAHGARLVVDNVF
                     ATPLLQHPLQLGADLVTYSATKHIDGQGRTLGGVVLGSKALITGDVHTLLRQTGPSLS
                     PFNAWVLLKGLETMPLRVRQMTESAARIADFLASQPKIARIAYPHHPSHPQYALAKRQ
                     MSSGSTLIAIEVKGGRDAAFALSDALAVILISNNLGDAKSLITHPGTTTHARFTEEVR
                     LESGITPGLLRLSVGLENVDDLLKDLQFGLDQI"
BASE COUNT         1318 a         2956 c         2605 g         1376 t
ORIGIN      
        1 cttcctcacc ctcgaggatt tcaccgaaga ccagctgcgc ggcatgctcg ccgtggcgac
       61 cgagctcaag gcccgcctga agcgcggcga gcgcccgtcg ctgctgcccg acaagatgct
      121 ggcgatgatc ttcgagaagc aatcgacccg cacccgtgtc agcttcgatg tgggcatgcg
      181 ccagctcggc ggcgagacca tgttcctcag cggcgacagc atgcagctgg cccgcgagga
      241 aacgctcgcc gacaccgccc gcgtgatgag ccgctacgtc gacgccatca tgatccgcat
      301 cctcgaccac gacgacctgc tcgaccttgc cggggcttcc tcgatcccgg tgatcaacgg
      361 cctgacgcgc cgcgcccatc cctgccaggt gatggccgac atccagacgt tcgaggagca
      421 tcgcgggccg atcaagggcg ccaaggtcgc ctgggtcggc gatgccaaca acgtgctcgc
      481 cagctgggtg catgcgagcc ggttgttcgg caacaaattc gccatcgcct gcccggacga
      541 atacggcccc gaccagggcc tgctcgccga catcaaggag gccgggccca acgtcacgct
      601 gggcgaggac ccgctggtcg ccgtcaagga tgccgacctc atcgtcaccg acacctgggt
      661 gtcgatgggc gacaccgacg tttccgatcg ccgcaagacc ttgaaaccct accgcgtcga
      721 caccaatctg atgggcctgg ccgacagcga tgcgctgttc atgcactgcc tgccggccca
      781 ccgcggcgat gaagtcaccg acgaggtcat agacggaccg caatcggtgg tcttcgacga
      841 agccgaaaac cgcctccacg cgcaaaaggc gatcctgtgc tggtgcttcg ggatcgatac
      901 ggtctgaatg cctgaattgc agcttgccga ctatggtctc gatcgcgccg aatccggcga
      961 cgacgtcgtg gtccccttca ccctcgagca gctcgacagc cgcggccgcg tagtccggct
     1021 gggcgaggcg ctcgatgcca tcctgacgcg ccacaactat cccgcgccgg tcgcccggct
     1081 gctgggcgag gccgtggtgc tcgccgcgct gatcggctcc tcgctcaaat tccagggcaa
     1141 gttcatcctg cagacgcaga ccgacgggcc ggtgaacctc atcgtcgtcg atctcgacgc
     1201 gcccgacggg ttgcgcggct acgcccgctt cgacgccgac gcggtccgcc acgccgtaga
     1261 aaccggcgcc acgcagccgg gccagctgct cggcaaaggc catctggcga tgaccgtcga
     1321 ccagggcgtc cacatggaac gctaccaggg catcgtcgcg ctcgagggcg gttcgctcga
     1381 ggacgtcgcg cacacctatt tccagcagtc cgagcaggtg ccgacgcttg tccgcctggc
     1441 ggtggcgcag ctcagccgca agggcgagcg gcaaccgcac tggcgggccg gcggcgtgct
     1501 ggtgcagcac ctgccgccgc atggcgcgcg gaccatgccg gacctgcccg gcgacggcga
     1561 cttctccaat ccggccaccg ccgatgcgag cttcgccgag agcgagaagt ggaccaccac
     1621 ccgggcgctg ctggcgacgg tcgccgacga cgagcttgcc gaccccgatg tcagcgccga
     1681 acggctgctg ttccggctgt tccacgagac cggcgtgcgg gtcttcgcac cggtgccgct
     1741 cgaggagcgc tgcacctgct cggcggagcg gatcgaggcc atgctgcgcg acaatttcag
     1801 cgccggagag cgcgccgata tggtcgtcaa tggcgagatc gaggtaatct gcgagttctg
     1861 ctcggcggat taccacttcc agccgcacga gttcgacggc accaagcact agcctcgtcg
     1921 ccgcgacgcg gtgccgccgc ctctgcgatc acaagatcgc gaggcgcctt cgcgtccgct
     1981 tctttcattt gtctcattcg gctgctccac ataggttttg cgcgccttgg gagcgatgcg
     2041 cattggaaca ggaaaagatc gacgtgacgc gggccgtgcc cgtgtccgaa cagtccgcaa
     2101 cgccgcagcg gccggtgcgc cggggtgcgc cgatctggct gcagctcatc ctgaccctcg
     2161 tggtgctggt gatcgcgctc ggcgtcgccg ggcttttcct gccatcggct aatgccatgc
     2221 tcgccaatgt cggcgtccgc ctgccgctgc tcaattcggc agctggtgcc ggacccgcag
     2281 cggcgccaca ggctcaagcc aagggccagg cgcagggagc ccgccagggc cagggtaccg
     2341 ggcagggtgc cggtgcccgc ggcggcgctg gcgccggtgg ctcccgcgtg gcggttgtag
     2401 ttgcggccgc tgcgaccacc ggcatcatca acaacaagct gacctcgatc ggcgagggcg
     2461 tcgcggtcaa gtcggtgacc gtcaacccgc aatccgccgg cacgctgatg agcgtcgacg
     2521 tcaaggccgg cgacgccgtc aaggctggca ccaagctcgc gaccctcgac gccggcaccc
     2581 agcagatcgc ctacgacaag gccatgctcg cctcgcagga cgccgatgcg gcgctggtac
     2641 gggcccaggc cctgtccaag acccaggccc tgtccgacag ccagctcgcc actgcccagc
     2701 ttgcctccgc gcaggccaag ctcgccgtct ccgacgccaa gctgacgctc gatcagcgca
     2761 ccatcaccac cccggtcgac ggcatcgtcg gactgatcca ggtgacgccc ggcaatctcg
     2821 tcagcacgca gacggtcgtc accacgatcg aggatgcctc gcagattctc gtcaacttct
     2881 gggtgcccga gcgctattcg ggccagatga gcgtcaacct tcccgccgcc gccgaatccg
     2941 acgcgcttcc cggccgcacg ttcaacggca cgatcgacgc ggtcgacaac aagatcgatc
     3001 cgaccagccg caccctgcag gtgcaggcga cgctccccaa caacgacggc accatcaagc
     3061 ccgggatgtc cttcaccgtc gacatgagct tccccggcga gaccttcccg gacgtcgatc
     3121 cgctctcgat ccagtggtcc aacaccggcg cctatgtctg gaaggtcgtc gacggcaagg
     3181 tggtcaaggg catggtcgag atcatccagc gcaactccga cggcgtcctc gtcaagggcg
     3241 acgtcaagcc cggcgaccag atcgtcacgc agggcgtgct gcagctgacc gacaacgccc
     3301 cggtgcgcct gctcgatgcc ggcgccgcgg ccgcgcagaa caagccggcc agtggcgatg
     3361 ccgccgcttc ggccccggcg ggccaggcct cgagccagcc cgccgcttcg agccagggct
     3421 gaggccggca tgtcgatcca ggcgcaaaat gaacgcggcg gccagatcgc cggcctgttc
     3481 gtccgccgtc cggtcctcgc ggtggtcatc aatgcgctga tcgtggtcgg cggcctcgcg
     3541 gccttcctcg gcatcgaggt gcgcgagctg cccgaggtcg agcagccggt gctgaccatc
     3601 accaccacct tcgacggcgc ttccgccgac accatcgaca aggaaatcac ctcggtcatc
     3661 gagggcgccg tggcccgcgt gcagggcgtg gtcggcatct cttcggggtc gtcctacggg
     3721 cgcagccagg ttaccctgac cctggccgac ggcaccaacc tcgacagcgc gacgtccgac
     3781 gtccgcgacg ccacggcccg cgtcgtcgcc aaattccctg acggcgtcga tccgccgacc
     3841 atcgtcaagg ccgacccgaa cgcccaggcg atcatgcagc tctcggtcac gtccgacagc
     3901 atgagccgcg acgacatgac gacgctcgtc gacaacacca tcaccgagcg gctctcggcc
     3961 gtgcccggcg tcgccgacct gcagatctac ggcgagcagg ccaaggtctt caccatcgac
     4021 gtcgaccaga ccaagctcgc ctcgctcggc ctgacggtcg gcaacgtcca gacggcgctc
     4081 gccaccatcg ccttcgacac ggccgccgga accatgaacg gcgccaacca gaacatcacc
     4141 gtccatgcca tcgccgacgt caccacgccg gccgatttcg aaaacatcat catcgacggc
     4201 aggacccggc tgggcgacgt ggcgcgcgtc gtgttcggcc cggcctcctc ggcgagcggc
     4261 ctccattcgg acggcaagtc cggcatcggc atcggcatca tccgcgccgc cgagtccaac
     4321 accatccaga tttccgacgg cgtctacaag gcgatcgacg agctgaagac gcagattccg
     4381 agcagcgtca ccatcaaggt ctcgagcgac gattccatct tcatcgccgg cgccctgcgc
     4441 gaggtcgagc gctcgctcgg ccttgccgtc gtcatcgtca tcgccgtcat cttcctgttc
     4501 ctgatggact ggcgcgccac cctggtgccc gccatctcca tgccggtggc cctcatcggc
     4561 gccatcgccg gcatctatct cgccggcttt tcgctcaaca tcctgacgct gctggccatc
     4621 gtcctcgcca ccggcatcgt cgtcgacgat tcgatcgtcg tgctggagaa catcgtgcgc
     4681 cgccgcggca tgggcgccgg cccgcgcgcc gccgccgtgc tcggcacgca ggaagtgttc
     4741 ttcgccgtca tcgccaccag cctgacgctg atcgccgtat tcgtgccgct gtccttcctg
     4801 ccgggccaga ccggccggct gttccgcgag ttcggcttca cccttgccat gtgcgtgggc
     4861 ctgtcctgcc tcgtcgcgct gagcctcggg ccgatgctgg cctcgcggct cctcggccac
     4921 cacgacgcca agatccaccg caacccgatc gccggcctcg gccgcgccct cgcccggctc
     4981 tatggcgtgc tgctccgctt ctgcctcgac accccgatgg tggtgatcgt catcgccgtg
     5041 ctttttgccg gctcggcagt gttcgtcttc ggctccatcc ggcaggagct gacgccgccc
     5101 gaggatcgcg ccgccgtgct gatccgcgtc tccgctccgc ccaccgtcag cctcgatttc
     5161 acccagaccg agatgcagaa gatcgaggac ctggtgcagc cgctggtcaa gtccggcgac
     5221 gtcaagtcga tcttctcggt ctcggggttc ggctccaaca cctccaacgg cttcatgtcg
     5281 ctgaccctcg cgccatggga ccagcgcacc cgcagccagc agcagatcac cgcccaggtg
     5341 aaccagctgc tgcagcaggt gccgggcgtg cagacccaga tcatccagcc caacagcctc
     5401 ggcatccgtg gcggcggcaa cggcctgcag ttcgcggtcg ccggttccga ctacaccgag
     5461 ctcaacgcca ccgcccagaa gatcgtcgac cagatgaacc aggacccgcg cttcggccgg
     5521 gtgacgatca actacaacgc cacgacgccg gaaatgacgg tcgccatcga tcgcgacaag
     5581 gccgccgcgc tgggcgtcga catcaccaat ctcggcacca cgctgcaggc gatgatcgac
     5641 ggcgcgcaga tcggccaggt cttcgtcgag gattcgagct accccgtgcg catcctctcg
     5701 accacgcagc cggtcaacga tcccagcgat ctcgagaaca tcttcctcaa gactgcggac
     5761 ggcaaatacg tgccgatgtc gtccgtcgcg acgctcaccg agtctcccat cgccccgcag
     5821 cttacccgcg agcagcagcg ccgcgacgtg tcggtcaccg cgaccctcga tggcctggcg
     5881 ctcggcgatg cctaccagcg cgtgctgcag atcgccgggc cgatcctgcc cgccggcgac
     5941 gtcgtgctgc cattggccga ggccaagacc atcggcgatt cgaactacgg gctggccatc
     6001 actttcggct tcgccatcat cgtcgtgctg ctggtgctgt cggcccagtt cgagagcgcc
     6061 ttcgccgccg tcatcgtcat ggtgacggtg ccgttcggcc tcgcctgcgc cgtctatgcg
     6121 gtgctgttca ccggcggcag cctcaacgtc tattcgcaga tcggcctcat catggtcgtc
     6181 ggcatcatgg ccaagaacgg cattctgatc gtcgaattcg ccaaccagtt gcgcgaccgc
     6241 ggcctcggcg tgcgcgaagc gatcgaagag agcgccaaca tccgcctccg gcccgtgctg
     6301 atgacgatga tcgccacggt actgggcggc gtgccgctgg tgatttcgag cggcgccggc
     6361 gccgaggcgc ggcaggcgct gggctggatc atcgtcggcg gcctcggctt tgccgccatc
     6421 tcgacgctgt tcctgacacc ggtggcgtac ctgctgctcg cccgcttcag caagcccaag
     6481 gcgcacgagc aggagcggct gcagaacgag ctggattccg ccggccaggc ggcgctggcg
     6541 gcagcgccgg ccgagtaggg tttcgcccct taccgcaccg gcgtagtctc tggccgccta
     6601 tgcaacgcgg agaagccggc gatgccccaa accgatccgg caggagttgc cgcagtcagg
     6661 cgggggctca tttccctcgc catcacgctt atcggtatgg ccgtactgct gtttgtgccg
     6721 gcggggactg tcggttggcc gatcggctgg tggttctgcg tcgctttcgt cgtttgcatt
     6781 ctgatttcga tcgtcaccat ttggcggctc aacccggaaa ttttcgtggc gcgctcgcgc
     6841 atccagcccg gcaccaagcg ctgggactat gttttcattg tcctgatcct caccgggttc
     6901 atggcagtgc ttccggttgc cgggctcgat gatcgcttcg gctggtcaag catgccgatc
     6961 tgggtgatcg tcctcggcta cgtggtcttt ctgctgtcct tcgccgacca gatctgggcg
     7021 ctggcagtca accgccattt cgagccgggc gtgcgcatcc agcaagaccg cggccagacg
     7081 gtcatcgata ccggccccta tgccatcgtt cggcacccgg gttacgtcgg cggcgtcacg
     7141 ctgggggtgg gaatggccct gatgcttggc tcgtggtggt cgctggtgcc agtgctcgtg
     7201 ctcggcggcg ctacggccgt gcgcaccctg ttcgaggagc ggacccttcg ggaggggctg
     7261 cccggatacg tcgaatacac ccagcgcgtg aagtggcgct gggtgccagg cgtgtggtga
     7321 cgcgctagat ctgatcgagg ccgaactgca ggtccttgag caaatcgtcg acgttctcga
     7381 gcccgacgct cagccgcagc aggcccggcg tgatgccgct ctcgagccgc acctcctcgg
     7441 tgaaacgggc atgcgtggtc gtcccggggt gcgtgatcag cgacttcgcg tcgcccaaat
     7501 tgttggagat gaggatgacg gccagcgcgt cggagagcgc gaacgccgca tcgcgcccgc
     7561 ccttgacctc gatcgcgatc agtgtcgagc ccgacgacat ctgccgcttg gccagcgcat
     7621 attgcgggtg cgacgggtgg tgcggatagg cgatccgcgc gatcttcggc tggctggcga
     7681 gaaaatcggc gatcctggct gcgctctcgg tcatctggcg cacccgcagc ggcatcgtct
     7741 ccagcccctt gagcagcacc caggcgttga acgggctgag cgatggcccg gtctgccgca
     7801 gcagcgtgtg tacgtcgccg gtgatcagtg ccttgctgcc gagcaccacg ccgccgagcg
     7861 tgcgaccctg gccatcgatg tgcttggtcg ccgaataggt cacgaggtcg gcgcccagct
     7921 gcagcgggtg ctgcagcagc ggcgtggcga agacgttgtc gaccacgagc cgggcgccgt
     7981 gcgcgtgggc gatgtccgcc acggccctga tatccaccag ctcgagcgtc ggattggtcg
     8041 gcgtctcgat gaacaccagc ttcgtgttcg gccgcatcgc cttttcgaaa ttcgccggat
     8101 cgcggccgtc gaccagcgtc gagggcacgc cgaagcgcgg catcaggtct tcgatcacgt
     8161 agcggcagcc gccgaacagc gcccgcgccg cgacgatatg gtcgccggcc cgcacctggc
     8221 tcatcaccgc attggtgacc gccgacatgc cggtg
//
LOCUS       DATAZA010000333         3251 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_617682, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000333 DATAZA010000000
VERSION     DATAZA010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3251
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_617682"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..449)
                     /locus_tag="VHZ56_08395"
     CDS             complement(<1..449)
                     /locus_tag="VHZ56_08395"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006334744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX4298030.1"
                     /translation="MGAEGTPHLLLTLKDGVVDIQLMPEVAPKHVQRIIDLTQKGAYD
                     GVVFHRVIEGFMAQTGDVKYGKSGSPDFSLQLAGTGGSDLPDVPAEFSSIHYAPGIVG
                     AARGEDPNSFNSQFFIMTAENGGLDGQYTVFGKVVAGMDFVNNIKKGA"
     gene            complement(545..1036)
                     /gene="coaD"
                     /locus_tag="VHZ56_08400"
     CDS             complement(545..1036)
                     /gene="coaD"
                     /locus_tag="VHZ56_08400"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013216132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEX4298031.1"
                     /translation="MTRLVGFYPGSFDPLTNGHLDVIERACKLVDTLIVAVGVNLSKK
                     PLFSHGDRIALLQQTLEPIGKRTDTEFEVVEFNGLMVTAARASGAKLIIRGLRDTTDY
                     NFEMQMVGMNAQMAPDLQTVFLPSSPHVRHISATLVREIAQLGGDISAFVPANVLKAL
                     KSR"
     gene            complement(1113..1676)
                     /locus_tag="VHZ56_08405"
     CDS             complement(1113..1676)
                     /locus_tag="VHZ56_08405"
                     /inference="COORDINATES: protein motif:HMM:NF013933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HEX4298032.1"
                     /translation="MVPGITVSTVISTALARGLRGAAWFELGAATARFTMVLVVAVAL
                     QAVTGLVSALFDPLKYIGAAYLLYLGIGYVSSRNGIKLTAAGEERPAFRQVATGFLTL
                     WGNPKALLFFGAFLPQFVDRHYPAWPQVVVLGLIEIVAAGITDGGYIAIAVGARRLLT
                     GGGVIWVNRVAGVILIGAAIWLATLNR"
     gene            complement(1755..2375)
                     /locus_tag="VHZ56_08410"
     CDS             complement(1755..2375)
                     /locus_tag="VHZ56_08410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HEX4298033.1"
                     /translation="MFSLTTLLTYVAACFLFAIVPGPAVTVVVANSLARGTRAGLLTI
                     LGTELAMLGMVLVVALGLQAVMSAVASAFTIIKLAGAAYLIWIGWKMFTSSGHIDLSR
                     RAEPLPLRRYVLQGAVINLSNPKSLLFLGAFLPQFVDMSRPAFGQILVLGLIVMAVAT
                     TTDSIYAVVAGRMGAVLTAARVRAMNRVSGVIVMGAAVWLALLKRA"
     gene            complement(2433..>3251)
                     /locus_tag="VHZ56_08415"
     CDS             complement(2433..>3251)
                     /locus_tag="VHZ56_08415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase C-terminal beta-propeller
                     domain-containing protein"
                     /protein_id="HEX4298034.1"
                     /translation="EWKKLDIMFATVRGNVRRNSLADFVDINKNGKIAMKLSEGDHLV
                     DVATCSKTDDVLLTTALGQAIRFQVDEVRVFKGRDSDGVRGISMVDDDKQPNGDKVIS
                     MAIIHHFEADSAERGAYLKMSRAVRGEGESEETASDDLEENAAGELGQDRYAAMSAAE
                     QFILTISENGYGKRTSSHEYRITGRGGKGIVAMAVNERNGTLVASFPVGDDDQIMLIT
                     DAGQTIRLPVSGDKPIRIVGRSSQGVTVLDTADGEKVVSVERISEPEGEGEEAE"
BASE COUNT          556 a         1135 c         1042 g          518 t
ORIGIN      
        1 gcgcccttct tgatgttgtt gacgaaatcc atcccggcca cgaccttgcc gaacaccgtg
       61 tactgcccgt cgagaccgcc gttctcggct gtcatgatga agaactgcga gttgaagctg
      121 ttcggatcct cgccgcgcgc cgcgccgacg atgccgggcg cataatggat gctggagaac
      181 tcggccggca cgtcgggcag gtccgacccg cccgtcccgg cgagctgcag gctgaaatcg
      241 ggcgagccgc tcttgccgta tttgacgtcg ccggtctgcg ccatgaagcc ctcgatgacg
      301 cggtggaaca ccaccccgtc ataggcgccc ttctgcgtca gatcgatgat ccgctgcacg
      361 tgcttggggg ccacctcggg catcagctgg atgtccacca cgccatcctt gagggtcagc
      421 agcaggtgcg gcgtgccctc ggcgcccatc gaggcggagg gaacggccac cacggcaccg
      481 aatgcggcgg cggcaacgat cgcgaggacg cccagcaggg ctcccgcacg cttgagaaga
      541 taattcatcg tgacttcaaa gccttgagga cgttggcggg aacgaaggcg gaaatatcgc
      601 cgccgagttg cgcgatctcg cgcaccagcg tggccgagat gtggcgaaca tgcgggctcg
      661 acggcaggaa gacggtctgc aggtccggcg ccatctgcgc gttcatgccg accatctgca
      721 tctcgaaatt gtagtccgtg gtgtcgcgca gcccccggat gatgagcttg gcgccgctgg
      781 cccgcgccgc cgtcaccatc agtccgttga actcgacgac ctcgaactcg gtgtcggtgc
      841 gcttgccgat cggctccagc gtctgctgca gcagcgcgat gcggtcgccg tgcgaaaaca
      901 gcggcttctt cgacaggttg accccgaccg ccacgatcag cgtgtcgacc agcttgcagg
      961 cccgctcgat cacgtcgagg tggccgttgg tcagcggatc gaacgagccg ggatagaacc
     1021 caaccagccg tgtcatgtgc cccagccctc gcgaatgcgt cgacgggcgg cgttctgtca
     1081 tgcgccgcgc ggccttgcaa gttgccccgg acctaccggt taagcgtcgc cagccagatc
     1141 gccgcgccga tcaggatcac cccggcgacg cggttgaccc agatcacccc gccgccggtg
     1201 agcaggcggc gcgccccgac cgcgatggcg atgtagccgc catcggtgat gcccgcggcg
     1261 acgatctcga tcagcccgag caccaccacc tgcggccagg cgggataatg ccggtcgacg
     1321 aactgcggca ggaaggcgcc gaagaacagc agcgccttgg gattgcccca cagcgtcagg
     1381 aagcccgtgg cgacctgccg gaacgccggg cgctcctccc ccgcggcggt gagcttgatg
     1441 ccgttgcgcg aggagacata gccgatcccc aggtacagca ggtacgccgc cccgatgtat
     1501 ttgagcggat cgaacagcgc cgacaccagc ccggtcaccg cctgcagcgc caccgccacc
     1561 accagcacca tggtgaaccg cgccgtcgct gcgccgagct cgaaccacgc cgcgccgcga
     1621 agcccgcgcg ccagcgccgt gctgatcacc gtcgacacag tgatgccggg caccatcacg
     1681 acgacgaacg ccgcgatggt gaacggaatg aggaccgacg cgtcgggcag gtggaaaatg
     1741 agacccctcg ccgctcaggc ccgcttgagc agggcgagcc acaccgccgc gcccatgacg
     1801 atcacgccgg agacccggtt catcgcccgg acgcgcgccg ccgtcagcac cgcgcccatc
     1861 cgtcccgcga cgacggcgta gatgctgtcg gtcgtcgtcg ccaccgccat gacgatcagc
     1921 ccgagcacca ggatttgccc gaatgccggc cggctcatgt cgacgaactg cggcaggaag
     1981 gccccgagga acagcagcga cttgggattg gagagattga tcaccgcgcc ctgcagcacg
     2041 tagcggcgca gcggcagcgg ctcggcgcgc cggctgaggt cgatgtggcc gctcgaggtg
     2101 aacatcttcc agccgatcca gatgagatac gccgcgcccg ccagcttgat gatcgtgaag
     2161 gcgctcgcca ccgcgctcat caccgcctgc agaccgagcg ccacgaccag caccatgccc
     2221 agcatggcga gttcggtgcc gaggatggtc aacagccccg ctctggtgcc gcgcgccagc
     2281 gagttggcga ccaccaccgt caccgcgggt ccgggaacga tcgcgaacag gaagcaggct
     2341 gcgacgtagg tgagcagcgt ggtcagcgag aacatcggcg cctccgggca acgcggcact
     2401 gaagccacgc agccgcaagc ttggcaaggg agctactcgg cttcctcgcc ctctccttcc
     2461 ggctcgctga tccgctccac cgacaccacc ttttcgccat ccgccgtatc gagcacggtg
     2521 acgccctgcg acgaccggcc gacgatgcgg atcggcttgt cgccgctgac cggcagccgg
     2581 atcgtctgcc cggcatcggt gatcagcatg atctggtcgt cgtcgcccac cgggaaagag
     2641 gcgaccagcg tgccgttgcg ctcgttcacc gccatggcga cgatgccttt gccgccgcgt
     2701 cccgtgatcc ggtattcgtg gctcgaggtg cgcttgccgt agccgttttc cgagatggtg
     2761 aggatgaact gctcggccgc gctcatcgcc gcatagcggt cctggccgag ttcgccggcg
     2821 gcgttctcct cgaggtcgtc gctcgcggtt tcctcgctct cgccctcgcc gcgcaccgcc
     2881 cggctcatct tgaggtaggc gccgcgctcg gcggagtcgg cctcgaaatg gtggatgatc
     2941 gccatcgaga tgaccttgtc gccattgggc tgcttgtcgt cgtcaaccat ggagatgccg
     3001 cgaacgccgt cggaatcgcg gcccttgaag acgcgcacct cgtcgacctg gaagcggatc
     3061 gcctgcccca gcgcggtggt cagcagcacg tcgtcggtct tcgagcatgt cgcgacgtcg
     3121 accagatggt cgccctcgct cagcttcatg gcgatcttgc cgttcttgtt gatatcgacg
     3181 aaatcggcca gcgagttccg ccgcacattg ccgcgcaccg tcgcgaacat gatgtcgagc
     3241 ttcttccact c
//
LOCUS       DATAZA010000334         7369 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4099855, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000334 DATAZA010000000
VERSION     DATAZA010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 7369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7369
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4099855"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..836
                     /locus_tag="VHZ56_08420"
     CDS             <1..836
                     /locus_tag="VHZ56_08420"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX4298035.1"
                     /translation="VHARLAGLGRHDRVALNTPHGGVLNYKNGTMVGDFFRGIERMIG
                     PITDAYIFESAYAQRRFHELIGTPPCAEAVIHNGLAPEEFDPLPCDPDACDFVFVGEF
                     REAKGIGYLIDALGPVQAGDGRPATLAMAGSGPEFEQTKARIRTMGLADRVELLGVKP
                     VREALKRGHCLVVASLAESLPYVILEGASAGRPVLSTNVGGIGEIFGPTSPSLFAAAD
                     TGALRRAMQGFMDNPAAAQAEARVRLDYIRPRFSIAHMADQIEALYRQVLGKRRGLTR
                     G"
     gene            933..2450
                     /locus_tag="VHZ56_08425"
     CDS             933..2450
                     /locus_tag="VHZ56_08425"
                     /EC_number="2.7.8.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate glucose
                     phosphotransferase"
                     /protein_id="HEX4298036.1"
                     /translation="MFRLDPQQAVLSHVARKPGSGTGELSHEAMAIVAAPIEPSYSAA
                     VIVGVAQVVEALLLATLGFAIFASYVEPGQGVIYLPTIAFATIFANVMLNAARTHRIV
                     AYRTAMQQIGRVLAAWSLVFIVLMLVAFLFKTSELVSRVWLVSWYFSGAILLVLFRLS
                     LRTLVLQWTREGRLRRRTVIVGGGHDAEVLVDQIKQSAGTDVRLLGLFDDRNDERSPE
                     SVASLAKLGRVPDLIEFARQTRVDLVIVSMPLSAEKRVLEMLTQLWVLPVDIRLSAHM
                     SKLRFTSKAYSYVGDVPVFDMVDRPISDWNLVFKWLFDKLVALAALVVLSPVMVATAI
                     AIKLDSKGPVFFRQKRHGFNNELIDVFKFRSMRTDTTDANAARLVTKGDPRVTRVGKF
                     IRKSSIDELPQLFNVLRGELSIVGPRPHALQAKADNKLYYEAVEGYFARHKVKPGITG
                     WAQINGWRGETDTVDKIMQRVQHDLYYIEKWSILLDLYILFMTPVSLFSKSENAY"
     gene            2452..3735
                     /locus_tag="VHZ56_08430"
     CDS             2452..3735
                     /locus_tag="VHZ56_08430"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEX4298037.1"
                     /translation="MALADASAPELLQRASGSAWLGARAARLLDWVVAFWIFLGSVVI
                     TEPAPYELVFFVVLAVSLFTGSFAFRRSTLGLLVLWASFIPFAIIGAFQPKFTDVPAA
                     LVFQFVTIFLFLTSYWVANFVAERPQERMRLIIGWYIATAAISALLGTLGYLGVVPGG
                     HDLLTRYDRAKALFNDPNVFAPFLILPAMYALQRVLLAAPRRAAIAAGIVMIITLGVF
                     ASFSRAAWAHLIASGLIVYLLCFFLVANAREKVRMLIIALVGVLLVVVAIGGLLSIPK
                     VQELFEVRAQAQNYDEGDGGRFGRQGYAFELALANPLGIGPYEFRNLHIAEEPHDSYV
                     DVLHVYGWGGGLAFYLFVVLTMWRGVRFLFVRSANRLLLIPLIAVWIPLCVEAAIIDL
                     DHWRHFWLVGGLIWGVTAGYRKVLPGEDKRLAALI"
     gene            complement(3776..3852)
                     /locus_tag="VHZ56_08435"
     tRNA            complement(3776..3852)
                     /locus_tag="VHZ56_08435"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3816..3818),aa:Pro,seq:ggg)
     gene            complement(3867..4304)
                     /locus_tag="VHZ56_08440"
     CDS             complement(3867..4304)
                     /locus_tag="VHZ56_08440"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4298038.1"
                     /translation="MHIEISEAIRSVLIVEDEALVAMMMEELVRELGVTDVHVCGDVA
                     SALELARLADIDCAVLDIRLRDGSSIEVADALAARGVPFMFSTGSDSEALEGRHAGRP
                     FIGKPFRDDDFTTLLLDTCRLGGAMPPVTTADALRVATFTPSD"
     gene            4510..4764
                     /locus_tag="VHZ56_08445"
     CDS             4510..4764
                     /locus_tag="VHZ56_08445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019859310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix protein, CopG family"
                     /protein_id="HEX4298039.1"
                     /translation="MSEKTAKGNDLQRGERLQIMLDEQELKALDDFRFANRMPSRAAA
                     IRELLRRGLEGLGYSADITGARSGSFGVISAPDGTPDRGD"
     gene            complement(4770..5231)
                     /locus_tag="VHZ56_08450"
     CDS             complement(4770..5231)
                     /locus_tag="VHZ56_08450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008875383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEX4298040.1"
                     /translation="MDKSPDAFRTISEAADELDLPQHVLRFWETRFSTIRPLKRGGGR
                     RYYRPEDVLLLKGIRHLLYEQGFTIKGVQKILKDQGARHVAAIGNGGADAPLPVADGI
                     ESDDEISPGNETAAALPHANGHSLAGGDRERLAEVLRDLLECKRLLERARE"
     gene            complement(5256..5567)
                     /locus_tag="VHZ56_08455"
     CDS             complement(5256..5567)
                     /locus_tag="VHZ56_08455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HEX4298041.1"
                     /translation="MTQKTVTRADLAEAVYESVGLSRTESAELVERFLGLIGDALVSG
                     QNVKLSSFGSFQVRSKNQRIGRNPKTGEEVPILPRQVLVFKPSNVLKSKINKSMVRAG
                     K"
     gene            complement(5707..6240)
                     /locus_tag="VHZ56_08460"
     CDS             complement(5707..6240)
                     /locus_tag="VHZ56_08460"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018326040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEX4298042.1"
                     /translation="MGDAPTLETARLRLRPFRLDDFDHYAGMWAEPVVVHYIAGGVPF
                     TREASWARFLRHVGMWHYLGYGSWVIEDRVTGAYAGECGFHDLHRPLTPSLEGTMEAG
                     WALRGEMQGQGRAKEAMRAALSWAIAERSGTRLTCIVDPGNAPSLRVAARLGYREFAR
                     TTYNGKPVVLFEHSGND"
     gene            complement(6243..7208)
                     /locus_tag="VHZ56_08465"
     CDS             complement(6243..7208)
                     /locus_tag="VHZ56_08465"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HEX4298043.1"
                     /translation="MSALRSIVRGVGGYLPAHILSNDELSKTLDTSDEWIQQRVGIKQ
                     RHIAAKGEVTSDLAVHAARRALDNARISVDEIDLIIVATTTPDLTFPATAAIVQNKLG
                     MHHGAAFDIQAVCSGFVYAMVTADSYLKNGIARRALVIGAETNSRILDWTDRSTCVLF
                     GDGAGAAILELGGDGERGVLASSLRSDGHFWDKLYTDGGVSSTQSMGHVHMEGKEVFR
                     HAVGKITDVVENVLTATGYTVNDLDWFVPHQANLRIIQGAGEKLHIPPEKVVITVDRH
                     ANTSAASVPLALTEAVGDGRIKRGDLVMIEAMGGGFTWGASLIRW"
BASE COUNT         1205 a         2365 c         2487 g         1312 t
ORIGIN      
        1 gcgtgcatgc gcggctcgcc gggcttgggc ggcacgaccg ggtggcgctc aacacaccgc
       61 atggcggggt gctcaactac aagaacggca cgatggtcgg cgacttcttc cgcggcatcg
      121 agcgcatgat cggtccgatt accgacgcct acatcttcga gagcgcctat gcgcagcggc
      181 ggttccatga gctgatcggc acgccgccct gtgccgaggc ggtgatccac aacggtcttg
      241 cgccggagga attcgatccc ctgccctgcg accccgatgc ctgcgacttc gtgttcgtcg
      301 gcgagttccg cgaggccaag ggcatcggct acctgatcga cgcgctcggg ccggtgcagg
      361 ccggcgacgg acggccggcg acgctcgcga tggccggcag cgggccggag ttcgaacaga
      421 ccaaggcgcg catccggacc atgggactgg cggaccgggt ggaactgctg ggtgtgaagc
      481 cggtgcgcga ggcgctgaag cgcggccact gcctggtggt cgcttcgctc gccgagtcgc
      541 tgccctacgt gatcctcgag ggggcctcgg caggccggcc ggtgctgtcg accaatgtcg
      601 gcggcatcgg ggagatcttc gggccgacct cgcccagcct gtttgcggcg gccgacaccg
      661 gcgcgctgcg ccgggcgatg cagggcttca tggacaatcc ggcggcggcg caggccgagg
      721 cacgggtgcg gctcgactac atccggccgc gcttttcgat cgcccacatg gccgaccaga
      781 tcgaggcact gtaccggcag gtgctcggca agcggcgggg cctcacgcgg ggttgaataa
      841 acctctcatg gttaatcata gggccgggtt ttcactcggc cttcacgcat cgctccctat
      901 attccagctg ccccatcgcc tggactattc cgatgtttcg cctcgatccg cagcaagccg
      961 tcctcagcca cgtcgcccgc aagccgggca gcggcacggg tgagctgagc cacgaggcca
     1021 tggccatcgt cgcggcgccg atcgagccga gctattcggc ggcggtgatc gtcggggtgg
     1081 cgcaggtggt cgaggcgctg ctgctggcga cgctcggctt tgcgatcttt gccagctacg
     1141 tcgagccagg ccagggcgtc atctacctgc cgaccatcgc cttcgccacg atcttcgcca
     1201 acgtcatgct caatgcggca cgaacccacc ggatcgtcgc ctatcgcacc gccatgcagc
     1261 agatcgggcg cgtcctcgcg gcgtggtcgc tggtgttcat cgtgctgatg ctggtggcat
     1321 tcctgttcaa gacgtcggag ctggtgtcgc gggtctggct ggtgagctgg tatttctcgg
     1381 gcgccatcct gctggtgctg ttccggctgt cgctgcgcac gctggtgctg cagtggacgc
     1441 gcgagggccg gttgcggcgg cggacggtga tcgtcggcgg cgggcacgat gccgaagtgc
     1501 tggtcgacca gatcaagcag agcgccggca ccgacgtgcg gctgctggga ctgttcgacg
     1561 accgcaacga cgagcgctcg ccggaatcgg tcgccagcct cgccaagctc ggccgcgtgc
     1621 ccgacctcat cgagttcgcg cggcagacgc gggtcgacct ggtcatcgtg tcgatgccgc
     1681 tcagtgccga aaagcgcgtg ctggagatgc tgacgcagct ctgggtgctg ccggtcgaca
     1741 tccggctcag cgcccacatg agcaagctgc gcttcacgtc caaggcctat tcctatgtcg
     1801 gggacgtgcc ggtgttcgac atggtcgacc ggccgatctc ggactggaac ctcgttttca
     1861 aatggctgtt cgacaagctg gtggcgctcg ccgcgctggt cgtgctgtcg ccggtgatgg
     1921 tggcgacggc gatcgccatc aagctcgaca gcaagggtcc ggtgttcttc cggcagaagc
     1981 ggcacggctt caacaacgag ctgatcgacg tgttcaagtt ccgctcgatg cgcaccgaca
     2041 cgaccgacgc caacgccgcg cggctcgtca ccaagggcga cccacgcgtg accagggtcg
     2101 gcaagttcat ccgcaagagc tcgatcgacg agctgccgca attgttcaac gtgctgcggg
     2161 gcgagctgtc gatcgtcggg ccacggccgc atgcgctgca ggccaaggcc gacaacaagc
     2221 tctactacga ggcagtggaa gggtatttcg cccgccacaa ggtgaagccc gggatcaccg
     2281 ggtgggcgca gatcaatggc tggcgcggcg agaccgacac cgtcgacaag atcatgcagc
     2341 gcgtgcagca cgatctctac tacatcgaga aatggtcgat cctgctcgac ctctacatcc
     2401 tgttcatgac gcccgtctcg ctgttctcga agtccgagaa cgcctactga catggcgctc
     2461 gccgacgcca gcgcgccgga actgctgcag cgcgccagcg gctcggcatg gctcggggcg
     2521 cgggcggccc ggctgctcga ctgggtcgtg gcgttctgga ttttcctcgg cagcgtggtg
     2581 atcaccgagc cggcgcccta cgagctggtg ttcttcgtgg tgctggcggt ctcgctgttc
     2641 accggcagct tcgccttccg gcgctcgacg ctcgggctgc tggtgctgtg ggcgagcttc
     2701 attccgtttg cgatcatcgg ggcgttccag ccgaaattca ccgacgtgcc ggcggcgctg
     2761 gtcttccagt tcgtcaccat cttcctgttc ctcaccagct actgggtggc caatttcgtc
     2821 gccgagcggc cgcaggagcg gatgcggctg atcatcggct ggtacatcgc gaccgccgcg
     2881 atctcggcgc tgctcggcac gctgggctat ctcggcgtgg tgccgggcgg gcacgacctg
     2941 ctcacccgct acgaccgcgc caaggcgctg ttcaacgacc ccaacgtgtt cgcgccgttc
     3001 ctcatcctgc cggcgatgta cgcgctgcag cgggtgctgc tggcggcgcc gcggcgggcg
     3061 gcgattgccg ccggcatcgt gatgatcatc acgctcgggg tgttcgcgag cttttcgcgg
     3121 gcggcgtggg cgcacctcat cgcgtccggg ctcatcgtct acctgctctg cttcttcctc
     3181 gtcgccaacg cccgcgagaa ggtgcggatg ctgatcatcg cgctggtcgg cgtgctgctg
     3241 gtggtggtgg ccatcggcgg cctgctgtcg atccccaagg tgcaggaact gttcgaggtg
     3301 cgcgcgcagg cgcagaacta cgacgaaggc gacggcggac ggttcgggcg gcaggggtat
     3361 gcgttcgagc tggcgctcgc caacccgctc ggcatcgggc cgtacgagtt ccgcaacctc
     3421 cacatcgccg aggagccgca cgacagctat gtcgacgtgc tgcacgtcta tggctggggt
     3481 ggcggactgg cgttctacct gttcgtcgtg ctgacgatgt ggcgcggcgt gcggttcctg
     3541 ttcgtccgtt cggcgaaccg gctgctgctg atcccgctga tcgcggtgtg gataccgctc
     3601 tgcgtcgaag cggcgatcat cgacctcgac cactggcgcc atttctggct ggtgggggga
     3661 ctgatctggg gcgtgaccgc aggttatcgc aaggtactgc cgggagagga caagcggctc
     3721 gcggcgctca tctgagcctg acacaccatg aaagatgttc atggcgggaa ggaaatggtc
     3781 ggagtggccg gatttgaacc gacgaccctt tgtcccccag acaaatgcgc taccaggctg
     3841 cgctacaccc cgacaccggc gcctatctag tcgctcgggg taaacgtggc aaccctcagg
     3901 gcatcggcgg tggtcaccgg gggcattgct ccgcccaggc ggcaggtgtc gagcaacagt
     3961 gtcgtgaagt cgtcgtcccg gaacggcttg ccgatgaacg gccgaccggc gtgacgtccc
     4021 tcgagcgcct cggaatcgct gccggtcgaa aacatgaacg ggacaccacg ggcggccagc
     4081 gcgtcggcga cctcgatgct gctgccgtcg cgcagccgga tgtccagcac ggcgcaatcg
     4141 atgtctgcca gtcgcgccaa ctccagggca gaggcgacat cgccgcagac atggacgtcg
     4201 gtgacaccca gttcgcggac cagttcttcc atcatcatcg caaccagcgc ttcgtcttcg
     4261 acgatgagaa ccgaccgaat ggcttcagag atttcgatgt gcattttggg gccgcctttc
     4321 aacatcgccg agtggtggac cggcgacctc accgctgtcg accgctttcg gagtgaggcg
     4381 ccggcgacac acaatcactt ctctccgaat gctcatttga accatttccc caaaaaggag
     4441 ttgtgtagag gcacacagtg agctaaatga gtaattgatg cttgtaactc atatgaggcg
     4501 caggggcaaa tgagcgaaaa gaccgccaaa ggcaatgact tgcagcgcgg cgagcggctg
     4561 cagatcatgc tcgacgagca ggaattgaag gcgttggacg atttccgttt tgccaaccgg
     4621 atgcccagcc gggcagccgc gatccgcgaa ttgctgcgcc gcgggctcga gggattgggg
     4681 tatagcgccg acatcacggg tgcgcgatca gggtctttcg gggtcatcag tgccccggac
     4741 ggcacgccgg atcgcggcga ttagccgggc tactcccggg cacgctccaa caggcgcttg
     4801 cactcgagca gatcgcgcag aacctcggcg aggcgttccc gatcgccgcc cgccagggaa
     4861 tggccgttgg cgtgcggaag tgctgccgca gtctcgttac cggggctgat ttcgtcatca
     4921 gactcgatgc cgtcagcgac aggcagcggc gcgtccgcgc cgccattgcc gatcgccgcg
     4981 acatggcggg ccccctgatc cttgaggatc ttctgcacgc ccttgatggt gaagccctgc
     5041 tcgtagagca ggtggcggat gcccttgagc agcagcacat cctcgggacg atagtagcgc
     5101 cggccaccgc cgcgtttcag cggcctgatg gttgaaaaac gcgtctccca gaaccgcagc
     5161 acatgctgcg gcaggtcgag ttcgtcggca gcctcggaga tggtgcggaa ggcgtcggga
     5221 gacttgtcca acccgaatcc cttctggaga aagtcttatt ttccagcgcg aaccatagat
     5281 ttgttgatct tggatttcaa cacgttgctg ggtttgaaca ccagaacctg ccgcggcagg
     5341 atggggactt cctcgccggt cttggggttg cggccgatgc gctggttctt ggagcggacc
     5401 tggaacgagc cgaaggagct cagcttgacg ttctgaccgg acaccagggc gtcaccgatc
     5461 agtcccagga agcgctcgac cagttccgcc gactccgttc ggctcagccc gaccgactcg
     5521 tagacggcct cggcaaggtc ggcgcgagtc actgtcttct gggtcatgcc gctcccccgc
     5581 tccgccagac tggatccgcc gtcccgtcag gcgccccgcc ccgagatgtg aaagactaac
     5641 tcccataaac aattaaggca acgccggagg accgcaggtg cggtcgccgg agcgccgctc
     5701 cgcctgtcaa tcgttaccag aatgctcgaa caggacgacc ggcttgccgt tgtaagtggt
     5761 tcgcgcgaac tcgcgatagc caagcctggc ggcgacccgc agcgagggcg cgttgcccgg
     5821 atcgacgatg caggtgagcc gcgtgccgct gcgctcggcg atggcccagg agagggcggc
     5881 gcgcattgcc tccttggcac gtccctggcc ctgcatctcg ccccgcagcg cccagccggc
     5941 ctccatggtg ccttcgaggg atggcgtcag cgggcgatgc agatcgtgaa aaccgcattc
     6001 cccggcatag gccccggtca cccggtcctc gattacccaa gagccgtagc cgagataatg
     6061 ccacatgccg acatggcgca ggaaccgcgc ccacgacgcc tcgcgggtga acggcacgcc
     6121 gccggcgata tagtggacaa ccacgggctc cgcccacatg ccggcgtagt ggtcgaaatc
     6181 gtcgaggcgg aacggtcgca gccgcagccg ggcggtctca agcgtcggcg cgtcgccgat
     6241 actcaccagc ggatcaggga tgcgccccag gtgaagccgc ctcccatcgc ctcgatcatc
     6301 accaggtcgc cacgcttgat gcggccgtcg ccgaccgcct cggtgagcgc caggggcacc
     6361 gaggccgccg aggtgttggc gtggcgatcg acggtgatga cgaccttttc gggcgggatg
     6421 tgcagctttt cgccggcacc ctggatgatc cgcagattgg cctggtgcgg cacgaaccag
     6481 tcgagatcgt tcacggtgta gccggtggcg gtgaggacgt tttcgacgac gtcggtgatc
     6541 ttgccgacgg catggcggaa gacctccttg ccctccatgt ggacgtggcc catcgactgc
     6601 gtcgaggaga ccccgccatc ggtgtagagc ttgtcccaga agtgaccgtc ggagcgcagc
     6661 gacgaggcga gcacgccgcg ctcgccgtcg ccgcccagtt cgaggatcgc ggcgccggcg
     6721 ccgtcgccga acaggacgca ggtcgaccgg tcggtccagt cgaggatgcg cgaattggtc
     6781 tcggcaccga tgaccagggc gcggcgggca atgccgttct tcaggtacga gtcggcggtg
     6841 accatggcgt agacgaagcc cgagcacacc gcctgaatgt cgaacgcggc gccgtgatgc
     6901 atgccgagct tgttctggac gatggcggcg gtggcgggaa aggtcaggtc gggcgtcgtg
     6961 gtcgcgacga tgatcaggtc gatctcgtcg accgaaatgc gggcgttgtc gagggcgcgg
     7021 cgcgcggcgt ggacggcaag gtccgaggtg acctcgccct tggcagcgat gtggcgctgc
     7081 ttgatgccga cgcgctgctg aatccactcg tcggaggtgt cgagcgtctt cgacaactcg
     7141 tcattgctga ggatgtgcgc cggcaggtag ccgccgacgc cacgcacgat cgaacgcagg
     7201 gcactcacgc gggtttcgcc tctctctcgg ttggaagcgg tgccggctcg tgggatccgc
     7261 ccgctgccgg aaacgccggg aaacgccgca tgccttcgga aatcttgtcg atgagacggc
     7321 tgcgcgccat ctcgtaggcc agcccgagcg ccgccttgaa gccgatctc
//
LOCUS       DATAZA010000335         4988 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2940004, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000335 DATAZA010000000
VERSION     DATAZA010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4988
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2940004"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..921
                     /locus_tag="VHZ56_08470"
     CDS             <1..921
                     /locus_tag="VHZ56_08470"
                     /EC_number="7.5.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007815437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HEX4298044.1"
                     /translation="HRLHEIEQAADRVVVLRDGRLAGNLDKADITHEHMVKLMIGRDL
                     KAQVSTAGIAPGDVAMKATGIRTGTYPGQAISLELRCGEILGVAGLVGSGRTELARAM
                     FGVDPIHGGSFELGGAPFHPRHPSQAVDNGLFLVPEDRKGAGLLLDLSIAQNVSLPDL
                     PRYARNFLVSGSSETRAAETQRRNLGIKAPQLSTKAANLSGGNQQKVVLAKWLAMSPK
                     VMIFDEPTRGIDVGAKAEIYRLMRGLADAGVAVMMISSDMEEVIGVSDRIVVMHEGRI
                     SGALSRDQFSEENVLQLAVGKPLQQGGRAA"
     gene            918..1919
                     /locus_tag="VHZ56_08475"
     CDS             918..1919
                     /locus_tag="VHZ56_08475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013891759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4298045.1"
                     /translation="MNKKDLGLLILILVVGAVVTLINPRFLLPINIANTASLVGMFGL
                     SALGQAVVILTGGIELSVGSVIALIGTLFVDFVATRGIPWPLAVLAMLLITVVIGLIH
                     GLLITKLRMQPFVVTLCGLLIYRGIARFYTGEANAGFGFDQNFPDLEAVTTSRPFGVP
                     VSIIALLVCAIIMWVVMHRSVFGRYLYAVGKNEEAARFSGIKTTRVIIAAYIICQVLT
                     AISAIYFAMYTHSIAPASQGNFYELYAIAAAVLGGFSLKGGEGSVIGALLGVVLLQEL
                     QNLVNLLGIPSSLNFAVMGGVIIIGVLIDQQFGVYRERRRILEASRQPAPAERSPAE"
     gene            complement(2010..2294)
                     /locus_tag="VHZ56_08480"
     CDS             complement(2010..2294)
                     /locus_tag="VHZ56_08480"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HEX4298046.1"
                     /translation="MMAPLLHPLDELELERLRRGFAALTPRERQILERIVNAESTLKI
                     AYDLEIATRTVELHRQNVLQKMRAINTPDLVRRVALLENAERPRRSGTDD"
     gene            complement(2297..2971)
                     /locus_tag="VHZ56_08485"
     CDS             complement(2297..2971)
                     /locus_tag="VHZ56_08485"
                     /inference="COORDINATES: protein motif:HMM:NF012967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-homoserine-lactone synthase"
                     /protein_id="HEX4298047.1"
                     /translation="MQIHVITSANAEQNAGFLDLYYQARHKVYADELRWVKPSPDGRE
                     HDPYDTEHAVHFVGMESGQMIAASRLVPTHRPHLLADNFAANCTKGLIRDARVAEWTR
                     GFVVRERRDGALGILYQFCHAIMEYSLAEGITMVGGIQRTYWLPMWMRMGWKVHIIGE
                     PVDMDGDPWVPAYADVSESALQGAARRAKVERSLLVRSGPQRPFVETPHPLSAGAHAP
                     ANTVEA"
     gene            complement(3056..3781)
                     /locus_tag="VHZ56_08490"
     CDS             complement(3056..3781)
                     /locus_tag="VHZ56_08490"
                     /inference="COORDINATES: protein motif:HMM:NF015437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR family transcriptional regulator"
                     /protein_id="HEX4298048.1"
                     /translation="MEDLVEQALAFTDRANNHEKVGDLLADFSVLVHEFGFNHFIMTG
                     LPSYGEDVEKLIVAMGWPVSWLDRYREGNYFYKDPVSMEAMRSARKYSWGEARDRHPA
                     TRVSLQIEDEAKDMGLADGLAFPLFDPDNWQAIVSLSSEQRLDLPDRMQNMVYLAAAV
                     AQGRATALLEPNRPRVARLTARECDVLSWLAHGKTKGEVADILMVSENTIKMHVRHII
                     EKLNVSNVTHAVARAVHSRQIQL"
     gene            complement(3871..4035)
                     /locus_tag="VHZ56_08495"
     CDS             complement(3871..4035)
                     /locus_tag="VHZ56_08495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298049.1"
                     /translation="MAHIDLGHADMKPAPIVRYEIAQDLSRTKQMMVGAVIAATMIVV
                     MAAMFLTTVH"
     gene            4216..4809
                     /locus_tag="VHZ56_08500"
     CDS             4216..4809
                     /locus_tag="VHZ56_08500"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEX4298050.1"
                     /translation="MPITRRAFVILGAGASLSACASIGVTSVVPAGATSPAQLTQAAI
                     LAAVNDARRLNGNHKPMTYSTRLEAAARSQANLMAQKDTLAHNLGVTLRERVTAAGYE
                     GAVGENIAGGQTTLQQAIEGWLNSPGHRATLLSDKFTEFGLAWAHTSAATKSKYGNYW
                     CFIAGGSFGPWLNGGDPTAAKDSGGGDQLTIGGGVSG"
     gene            complement(4799..>4988)
                     /locus_tag="VHZ56_08505"
     CDS             complement(4799..>4988)
                     /locus_tag="VHZ56_08505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009755866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycerol kinase"
                     /protein_id="HEX4298051.1"
                     /translation="ILETTALGAAWLAGWKAGVWPDARGFAKRWALDRQFNPAMETAE
                     RKRKLAGWRDAVRRTLSR"
BASE COUNT          792 a         1707 c         1594 g          895 t
ORIGIN      
        1 caccggctgc acgagatcga gcaggctgcc gatcgcgtcg tcgtccttcg cgatggccgg
       61 ctggccggca acctcgacaa ggccgacatt acccacgagc acatggtcaa gctgatgatc
      121 gggcgcgatc tcaaggccca ggtctcgacc gccgggatcg caccgggcga cgtcgccatg
      181 aaggcaaccg gcatccgcac tggaacctat ccgggccagg cgatcagcct cgagctgcgc
      241 tgcggcgaga tcctgggggt cgccgggctg gttgggtccg gtcgcaccga gctggcgcgc
      301 gccatgtttg gcgtcgatcc catccatggc ggcagcttcg agctcggtgg cgcgccgttc
      361 catccgcgcc acccttcgca ggcggtcgac aatggcctct tcctcgtgcc cgaggatcgc
      421 aagggcgcgg gcctgctcct cgatctgtcg atcgcgcaga acgtctcgct gcccgacctg
      481 ccgcgctacg cccgcaattt cctggtcagc ggctcgagcg aaaccagggc cgcagagacg
      541 cagcggcgca acctcggcat caaagcgccg cagctctcga ccaaggctgc caacctgtcg
      601 ggcggcaacc agcagaaggt cgttctggcc aagtggctcg ccatgtcccc aaaggtcatg
      661 atcttcgacg agccgacgcg cggcatcgac gtcggcgcca aggccgagat ctaccggctg
      721 atgcgcggcc tcgccgatgc cggcgtcgcc gtgatgatga tctcgagcga catggaagaa
      781 gtcatcggcg tgtccgaccg catcgtcgtg atgcacgagg gacgcatctc gggcgcgctg
      841 tcgcgcgacc agttcagtga agaaaacgtg ctgcagctcg ccgtgggcaa gccgttgcaa
      901 caagggggca gggcagcatg aacaagaagg atctcggcct tctcatcctc atcctcgtgg
      961 tcggtgccgt cgtcacgctg atcaatccac gcttcctctt gccgatcaac atcgccaaca
     1021 ccgccagcct cgtcggcatg ttcggcctgt cggcgctggg ccaggcggtg gtcatcctca
     1081 ccggcggcat cgagctgtcc gtcggctccg tcatcgccct catcggaacg ctgttcgtcg
     1141 atttcgtcgc gacccgcggt atcccgtggc cgctggcggt gctggcgatg ctgctgatca
     1201 ccgtggtgat cggcctgatc cacgggctgc tgatcaccaa gctccggatg cagcccttcg
     1261 tggtgacgct gtgcggcctg ctgatctatc gcggcatcgc ccgcttctac accggcgagg
     1321 ccaacgccgg tttcggtttc gaccagaatt tccccgatct cgaagcggtc accacgagcc
     1381 ggccgttcgg cgtgccggtg tcgatcatcg cgctgctcgt gtgcgccatc atcatgtggg
     1441 tggtgatgca ccgctcggtg ttcggtcggt acctctacgc cgtcggcaag aacgaggaag
     1501 ctgcccgctt ttcgggcatc aagaccacgc gggtcatcat cgccgcctac atcatctgcc
     1561 aggtgctgac cgccatttcg gcgatctatt tcgccatgta cacgcactcg atcgcgcctg
     1621 cctcgcaggg caatttctac gagctctacg ccattgccgc ggcggtgctg ggcggcttct
     1681 cgctgaaggg cggcgagggc tcggtcatcg gcgccctttt gggcgtggtg ctgctgcagg
     1741 agctgcagaa cctcgtcaac ctgctcggca ttccgtcgtc gcttaatttc gccgtcatgg
     1801 gtggcgtcat catcatcggc gtgctcatcg accagcagtt cggcgtctat cgcgagcgcc
     1861 ggcgcattct cgaggcctcg cgccagccgg cgccggccga gcgctctccg gcggagtagc
     1921 cggacgtccg gagcgccgcc gtctcagaac ggcgctccag gccggccggc ccgccggcga
     1981 cgtgacaggc cattgggcaa cccgcaatct cagtcgtcgg tgcccgaccg gcgcggccgc
     2041 tcggcattct cgagcagggc cacccgccgc accaggtccg gcgtgttgat ggcccgcatc
     2101 ttctgcagca cgttctgccg gtgcagctcg acggtgcgcg tcgcgatctc caaatcgtag
     2161 gcgatcttca gcgtcgactc ggcgttgacg atccgctcga ggatctgccg ctcgcgcggc
     2221 gtcagcgcgg caaagccccg ccgcaggcgt tcgagctcga gttcgtcgag cgggtggagc
     2281 aggggagcca tcatgatcaa gcctctacgg tattggcagg cgcgtgtgcg ccggcggaaa
     2341 ggggatgcgg ggtttccacg aacggtcgct gcggcccgct gcggaccagc agcgaccgtt
     2401 ccactttggc ccgccgcgcc gcgccttgca gcgcggactc gctgacgtcg gcataggccg
     2461 ggacccacgg gtcgccatcc atgtcgacag gttctccgat gatgtggacc ttccagccca
     2521 tgcgcatcca catcggcagc cagtaggtgc gctggatgcc gccgaccatg gtgatgccct
     2581 cggcgagcga gtactccatg atcgcgtggc agaactggta gaggatgccg agcgcgccat
     2641 cgcgccgctc gcgcaccacg aagccgcgcg tccactcggc cacccgcgca tcgcggatca
     2701 ggcccttggt gcagttggcg gcgaaattgt cggccagcag atgcggccgg tgcgtcggca
     2761 ccaggcgcga cgcagcaatc atctggccgc tttccatccc gacgaagtgc accgcgtgct
     2821 cggtgtcgta gggatcgtgc tcgcgcccat ccggcgacgg ctttacccag cgcagttcgt
     2881 cggcgtagac tttgtggcgg gcctggtagt agaggtcgag aaaaccggcg ttctgctcgg
     2941 cattcgcgct cgtgatgacg tggatctgca tgacggctct ccttctggat gccgtcatgc
     3001 tgcagaagac ctgcgggtta cgtcattgcc cgatcgggca atagaatcaa attgtttaga
     3061 gttggatttg ccggctgtgc acggctcgcg ctacggcgtg cgtcacgttg gaaacgttga
     3121 gtttctcgat gatgtgccgg acatgcatct tgatggtgtt ttcggaaacc atgaggatgt
     3181 cggccacttc gcccttggtt ttcccgtgcg ccagccagct cagcacgtcg cactcgcggg
     3241 cagtcagccg ggccacccgc ggccggttcg gctcgagcag tgccgtcgcc cgtccctgcg
     3301 ccaccgccgc cgccaggtag accatgttct gcatgcggtc gggcaggtcg agcctctgct
     3361 ccgagctcag cgacacgatc gcctgccagt tgtccggatc gaacagcgga aaggcgagcc
     3421 catcggccag ccccatgtcc tttgcctcgt cctcgatctg caggctcacc cgggtcgccg
     3481 gatgccggtc ccgcgcttcg ccccaggaat atttccgggc gctgcgcatc gcctccatgc
     3541 tcaccggatc cttgtagaag taattgcctt cccggtagcg gtcgagccag ctcaccggcc
     3601 agcccatcgc gacgatgagc ttctcgacat cctcgccgta ggagggcagc ccggtcatga
     3661 tgaaatggtt gaagccgaac tcgtgcacga gcacggagaa gtccgccagc aggtcgccga
     3721 ccttctcgtg attgttggcg cggtccgtga aggccaacgc ctgttcgacc agatcttcca
     3781 tgtccagccc ctcgacggag cctggatttt aggccggccg gaggcaaata gcgactaagt
     3841 atttaccgca ggtttgcgcc gattgcaggg tcagtggacc gtggtcagga acatcgcggc
     3901 catgacgacg atcatggtcg cagcgatcac cgcgcccacc atcatctgct tggtccggct
     3961 gaggtcctgc gcgatttcat agcgcacgat cggcgccggc ttcatgtctg cgtgaccgag
     4021 atcgatatgc gccatgcgag cccactccca accacaagga gtgtgcagcc ggcgggcgcg
     4081 gctggcgagg acggcctcga ttcgccgtta atttagttca aacacgccaa aactcgccgg
     4141 atgtggcgcc gtgccgcttt tcccgttcgc gccccggggc tagaaggcgc cggtcccgct
     4201 gttccggaat tgcccatgcc gatcacccgc cgcgccttcg tcatcctcgg tgcgggcgcc
     4261 tcgctcagcg cctgcgcctc gatcggggtg acttcggtcg tccccgccgg cgccaccagc
     4321 ccggcgcagt tgacgcaggc cgcgatcctc gccgcggtca acgacgcccg ccggctcaat
     4381 ggcaaccaca agcccatgac ctacagcacc cggctcgagg cggcggcccg gtcgcaggct
     4441 aacctcatgg cccagaagga tacgctggcg cacaatctgg gcgtgacgct gcgcgagcgc
     4501 gtcaccgcgg ccggctacga gggggcagtg ggcgaaaaca tcgccggcgg ccagaccacg
     4561 ctgcagcagg cgatcgaggg ctggctcaat tcgccgggcc atcgcgccac gctgctgagc
     4621 gacaaattca ccgagttcgg cctcgcctgg gcccacacct cagccgccac aaagtccaaa
     4681 tacggaaact actggtgctt tatcgccggc ggttcgtttg gcccgtggct gaacggcggc
     4741 gatccgactg ccgccaagga tagtggcggc ggcgaccagc tcaccatcgg cggcggcgtc
     4801 agcggctgag cgtccgccgc accgcgtcgc gccaaccggc gagcttgcgc ttccgctccg
     4861 ccgtctccat cgccgggttg aactgccggt cgagagccca gcgcttggca aagccgcgtg
     4921 catcgggcca caccccggcc ttccagccgg cgagccacgc cgcgccgagc gccgtcgtct
     4981 cgaggatc
//
LOCUS       DATAZA010000336         4750 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3404784, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000336 DATAZA010000000
VERSION     DATAZA010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4750
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3404784"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1386)
                     /locus_tag="VHZ56_08510"
     CDS             complement(<1..1386)
                     /locus_tag="VHZ56_08510"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX4298052.1"
                     /translation="MATLLTPDLCVIGAGASGVAVAEAARRLGASVVVVEKAATGGMS
                     LRAGNLALRALGVAGEKAAAVGSGAALGVTADAARVSFRRLRDHIAEIIGQAAAETGA
                     PRLQALGIELVRGTGTFADPRTLKTGDTEIRARRFVIATGARSSVPDLPGLHTVAYFT
                     PETIFDNTRKLSHLVVIGAGPMGLELALGYRRLGCEVTVVEPARALPQSDPELADIAL
                     RRLRDEGVVLHEGSAIVAVQARSQGIGVTIRVGDEVTALDASHILVASNRIANLDELG
                     LDAAHIRRSKSDTGALWLNGALRTTNPRIFAVGEAAGHAPAAHLGALEADLVVRAALL
                     GRPAHYDAAAVPRLTLTDPPIAEIGLSEPMARTRLKGGFTVLRAGYAQTDEARAGRDG
                     MGVAKLVVGRSGHILGAGIVGAGAAELAALFAFAMDQRIEVARLAELAAPYPSHAELA
                     RILGEQALAGTG"
     gene            1669..1803
                     /gene="rpmH"
                     /locus_tag="VHZ56_08515"
     CDS             1669..1803
                     /gene="rpmH"
                     /locus_tag="VHZ56_08515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEX4298053.1"
                     /translation="MKRTFQPSVIVRTRRHGFRARMATKDGRIILNRRRALGRKRLSA
                     "
     gene            1817..2194
                     /gene="rnpA"
                     /locus_tag="VHZ56_08520"
     CDS             1817..2194
                     /gene="rnpA"
                     /locus_tag="VHZ56_08520"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: protein motif:HMM:NF013022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEX4298054.1"
                     /translation="MTAEPELRTVLRRLTKRREFLHAAQGDRAGRPGFTLQAIAVEGL
                     VAGVGFTVTKKTGNAPQRNRIKRRLRAAARACGDEFQPQHDYVLVGRREALTLPYAKV
                     VADLSSAIHKVHAKSRVAGTQRP"
     gene            2191..4023
                     /gene="yidC"
                     /locus_tag="VHZ56_08525"
     CDS             2191..4023
                     /gene="yidC"
                     /locus_tag="VHZ56_08525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008192199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEX4298055.1"
                     /translation="MNETNRNMIIAVVLSVAVLFGWQYFIAGPQMQRAQQQQQQAAAT
                     TAGAATTNNAAGGTAATAAGSTPAPNAGATFTDRAAAMAASPQRVAIDTASLKGSINL
                     TGGRLDDLQLKKYFETIEHKDIITLLTPSGAPDAYYVEQGWEPPSGSNVKVPGPTTLW
                     TADANTTLTEQTPVTLSWDNGAGLTFHRSFAVDANYLFTVTQSVDNKSGADVQLFPYS
                     RIVREGTPKVQNFFVQHEGPIGVLGTNNEISKKYTDLQGDKAPERFDNTTGWLGFSDK
                     YWATAVIADPGQTVNAQFTYLKPNNLDQYQTSFVDSAPLVVANGASASNKSYLFAGAK
                     EEAILSAYEQTYHFDRFDLMIDWGWFFFFTRPMFYLLKFLYGFLGNFGLAMLTMTVIV
                     KALFFPLANRSYASMAAMRRVQPEMKALQARFKDDRAAQQQATMELYKREKINPLSGC
                     WPVLIQIPVFFSLYTVIFISLEMRQAPFFGWVHDLATQDPTNVFTLFGLIPWDPTQLP
                     FVGGLAHLGIWPLIMGCTMWVQMRLNPPPPDPSQQLIFNWMPVIFTFMLGTFPAGLVI
                     YWSWNNFLSICQQYFIMSRHGAKVDLFGNILSSLGIRKTKPSST"
     gene            4090..>4750
                     /locus_tag="VHZ56_08530"
     CDS             4090..>4750
                     /locus_tag="VHZ56_08530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298056.1"
                     /translation="MDGITLITGPRTGAGHLMALLRNFDAVAPADGLLDEGPQDAGGR
                     IDLFELEARAGGKTLVVLKATSALPRDTVEHDLLRRPGMRAMLVVRRQIDSYVSLAKA
                     SALDAWRDTDLTPVKVKLDVARFAAWLAAEEAWYAHWKGWLERRAFPVPVLRYETHLT
                     LSPDGVLRRFASAAAQLGITLSVPEALPFAGLVRQDREKAVALKVRNWPEFSRALGEL
                     GI"
BASE COUNT          805 a         1620 c         1599 g          726 t
ORIGIN      
        1 tccggttccc gcgagcgcct gctcaccgag gatgcgcgcc agctcggcat ggctcggata
       61 gggcgcggcg agctcggcca gccgcgcgac ctcgatccgc tggtccatgg caaaggcgaa
      121 gagcgcggcg agctcggcgg ccccggcgcc aacgatcccg gcgcccagga tgtggccgga
      181 gcggccgacg acaagcttgg cgacacccat gccgtcgcgg ccggcgcgcg cctcgtcggt
      241 ctgggcgtag cccgcccgca gcacggtgaa accgcccttg agccgggtgc gggccatcgg
      301 ctccgagagg ccgatttcgg caatcggcgg gtcggtcagg gtcaaccgcg gcacggcggc
      361 ggcgtcgtag tgcgccggtc gacccagcag ggcggcacgg acgaccaggt ccgcctcgag
      421 cgcacccagg tgcgctgccg gcgcgtggcc cgccgcctcg ccgacggcga agatgcgcgg
      481 gttggtggtc cgcagcgcgc cgttcagcca gagcgcgccg gtgtcggatt tggagcggcg
      541 gatatgggcg gcatcgaggc caagctcgtc gagattggcg atgcggttgg aggcgacgag
      601 gatgtgagac gcatcgagcg ccgtcacctc gtcgccgacc cggatggtga cgccaatccc
      661 ctggctgcgt gcctgcacgg cgacgatggc cgagccctcg tgcagcacca cgccctcgtc
      721 gcgcaggcgg cggagcgcga tgtcggccag ctcgggatcg gattgcggca gcgcccgggc
      781 gggctcgacc acggtcacct cgcagccgag gcggcggtag cccagggcga gctcgagccc
      841 catcggccca gcgccgatga ccaccagatg gctcagcttg cgagtattgt cgaagatggt
      901 ctcgggggtg aaataggcga ccgtatgcag gccgggcaga tcgggcaccg acgagcgggc
      961 cccggtggcg atgacgaaac ggcgggcacg gatctcggtg tcgccggtct tgagggtgcg
     1021 cggatcggca aatgtgccgg ttcccctgac gagctcgatg ccaagcgcct gcagccgggg
     1081 ggcgccggtt tcggcagcag cctggccgat gatctcggcg atgtggtcgc gcagccggcg
     1141 gaagctcacc cgggcggcat cggcggtgac gccgagcgcc gcgccggagc cgaccgcggc
     1201 cgccttttcg ccggcaacgc caagggcccg cagcgccagg ttgccggccc gcaggctcat
     1261 gccgccggtg gcggcctttt cgaccaccac caccgaggcg ccaagccggc gcgccgcttc
     1321 cgccacggcc acgcccgagg cgcccgcgcc gatgacgcag agatcagggg tcaaaagcgt
     1381 tgccaagcct tacctttttg ccgcaagagg aaggtcagag ccgcttctag atcaatggcg
     1441 ccaaaacgcc agaggccgcg gcggaaaacc tgccacgatg cagacgagcg gtgcggcaac
     1501 ggcgcagcgc gcaaacggcc ggatgcgttg acttggccgg gctcattcag tatagccccg
     1561 atccaattct gcccgcgcga cggatcggct ttgccggcct tttgcgatct ggcggcgacc
     1621 tagcggaagt tcagacaaag aggaccgcgc ccggcgtggt gtgaaactat gaagcgtaca
     1681 ttccagccga gcgtcatcgt acgcacccgc cgtcacggtt ttcgggcccg catggcgacc
     1741 aaggacggtc gcattatcct taaccgccgc cgggcgctgg gccgcaagcg cctgtcggcc
     1801 tgacggacct ggccggatga cggccgagcc ggagctgcgc actgtcctga gacgcctcac
     1861 caagcggcgc gagttcctgc acgcggcgca gggcgaccgg gcgggacgcc cgggcttcac
     1921 gctgcaggcg attgccgtcg agggcctggt tgcgggagtc ggcttcacgg tgaccaagaa
     1981 gaccggcaac gctccccagc gcaaccgcat caagcggcgg ttgcgcgccg cggcccgggc
     2041 ttgcggcgat gaattccagc cccaacatga ctacgtgctc gtcggccgcc gcgaggcgct
     2101 gaccctgccc tacgccaaag tcgtcgccga cctttcttcc gccatccaca aagtgcacgc
     2161 caaatcgcgc gtcgccggaa cccagagacc atgaacgaaa ccaaccgcaa catgattatt
     2221 gccgtcgtgc tgagcgtggc ggtgctgttc ggatggcagt atttcatcgc cgggccccag
     2281 atgcagcggg cccagcaaca acagcaacag gcggcggcga ccactgccgg cgcggccacg
     2341 acaaacaatg cggcgggtgg caccgccgcg acggccgccg gcagcacccc tgcccccaac
     2401 gccggcgcga cctttaccga ccgagcggca gcgatggcgg cttcgccgca gcgggtggcg
     2461 atcgacaccg cctcgctcaa gggttcgatc aacctcaccg gcggccggct cgacgacctc
     2521 cagctcaaga agtatttcga gacgatcgag cacaaggaca tcatcaccct gctgaccccg
     2581 tccggggcgc ccgacgccta ttatgtcgag cagggctggg aaccgccgtc gggcagcaac
     2641 gtcaaggtac ccgggccgac gacgctgtgg accgccgacg ccaataccac cctcaccgaa
     2701 cagacgccgg tgacgctgag ctgggacaat ggcgcgggcc tgacgttcca ccgcagcttc
     2761 gcggtcgacg ccaactatct gttcacggtc acgcagagcg tcgacaacaa gtcgggcgcc
     2821 gacgtgcagc tcttccccta ttcgcgcatc gtgcgcgagg gcacgccgaa ggtgcagaac
     2881 ttcttcgtcc agcacgaagg cccgatcggc gtgctcggca ccaacaacga gatctcgaag
     2941 aagtacactg acctgcaggg cgacaaggca ccggagcgct tcgacaacac caccggctgg
     3001 ctcggcttct ccgacaaata ctgggcgacc gcggtgatcg ccgatccggg gcagacggtg
     3061 aacgcccagt tcacctacct caagcccaac aatctcgacc agtaccagac gagcttcgtg
     3121 gactcggcac cgctcgtcgt cgccaacggc gcctcggcga gcaacaagag ctatctgttc
     3181 gccggcgcca aggaagaggc gatcctgtcc gcctacgaac agacctatca cttcgaccgc
     3241 ttcgacctga tgatcgactg gggctggttc ttcttcttca ccagaccgat gttctacctg
     3301 ttgaagttcc tctacggctt cctcggcaat ttcggcctcg ccatgctgac gatgaccgtc
     3361 atcgtcaagg cgctgttctt tccgctcgcc aaccgctcct atgcctcgat ggcggcgatg
     3421 cggcgcgtgc aaccggaaat gaaggcgctg caggcacggt tcaaggacga tcgcgcggcg
     3481 cagcagcagg cgacgatgga gctctacaag cgggagaaga tcaacccgct gtcgggatgc
     3541 tggccggtgc tcatccagat cccggtgttc ttttcgctct acaccgtgat cttcatcagc
     3601 ctcgagatgc ggcaggcgcc gttcttcggc tgggtccatg acctcgccac ccaggacccg
     3661 accaacgtgt tcacgctgtt cgggctcatt ccgtgggacc cgacgcagct gccgttcgtc
     3721 ggcggcctcg cgcacctcgg catctggccg ctgatcatgg gctgcacgat gtgggtgcag
     3781 atgcggctca atccgccgcc gccggacccg agccagcagc tgatcttcaa ctggatgccg
     3841 gtgatcttca ccttcatgct ggggacgttc ccggcgggcc tggtgatcta ctggagctgg
     3901 aacaacttcc tgtcgatctg ccagcaatat ttcatcatgt cgcggcacgg ggcgaaggtc
     3961 gacctgttcg gcaacatcct gagctcgctc ggcatccgca agaccaagcc gagttcgacc
     4021 tgaggacggc ggcgtgcctc tagcggccga ccgcggccgc cgaggcgccg cgatccccgt
     4081 cgtctgctga tggacggcat cacgctcatc accggtccgc gtactggcgc gggccatttg
     4141 atggcattgc tgcgcaattt cgatgccgtg gcgccggccg acggactgct ggacgagggt
     4201 ccgcaggacg cgggcggcag gatcgacctt ttcgaactcg aggcgcgggc gggcggcaag
     4261 accctcgtgg tgctgaaggc gacctcggcg ctgccccgcg acacggtcga gcacgacctg
     4321 ctccggcgtc cgggcatgcg cgccatgctg gtggtgcggc ggcagatcga cagctacgtg
     4381 tcgctggcca aggcgtcggc gctcgatgcc tggcgcgaca ccgacctcac gccggtcaag
     4441 gtgaagctcg atgtcgcacg gttcgccgcc tggcttgcgg ccgaagaggc ctggtacgcg
     4501 cactggaagg gctggctcga gcggcgggcc tttccggtac cggtgctgcg ctacgagacg
     4561 cacctgacgc tgtcgccgga cggtgttctc cgccgcttcg cgtcggccgc cgcacaactg
     4621 gggatcacgc tcagcgtgcc ggaggcgctg ccatttgccg gactggtccg gcaggatcgg
     4681 gaaaaggcgg tggcgctcaa ggtccgcaac tggccggaat tttcgcgcgc actgggtgag
     4741 ctcgggatcg
//
LOCUS       DATAZA010000337         6835 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1315899, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000337 DATAZA010000000
VERSION     DATAZA010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6835
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1315899"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..536)
                     /locus_tag="VHZ56_08535"
     CDS             complement(<1..536)
                     /locus_tag="VHZ56_08535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008875478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4298057.1"
                     /translation="MNEIVAQELIEGSAEDVAGAHPLFRDAPRTVEFNKLRKRLVRLT
                     REALDKFAMVRPGERWLVALSGGKDSYGLLAVLLDLKWRGLLPVELLACNLDQGQPNF
                     PKNVLPDFLNAHGIAHRIEYRDTYSIVTDKLPEGATYCSLCSRLRRGHLYRIAREEGC
                     SALVLGHHREDSLETFFM"
     gene            680..1975
                     /gene="sbmA"
                     /locus_tag="VHZ56_08540"
     CDS             680..1975
                     /gene="sbmA"
                     /locus_tag="VHZ56_08540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904680 - peptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide antibiotic transporter SbmA"
                     /protein_id="HEX4298058.1"
                     /translation="MFRSFFPHPTNFFISAIAWTAVAMTAWFTIGSGMEQYLSVGPWV
                     AMQPTDANPAPFFNADKAWLYEYVIVAGYLFCVPWLLFNDNRRWQWWSIVGTVTIIEV
                     VYFNVQVSAWLNDWYGSFYDLIQAALGKPNSVSFDQYMAQIWTVAIVLAVNVFVLVIN
                     AFLNAHYLFRWRRAMSFYYMANWQQVRTIEGAAQRIQEDTQNFSSIVEGIGLNIVSSF
                     MTLIVFLPILWDLSGKVADMPWIGHVQGSLVWLALAQAIIGTLLFAVVGVRLPGLQFA
                     NQRVEAAFRKELVFGEDDPTRAQPITVRELFRNVQRNYFRIYFHYTYFNVARYAFINA
                     AQFFPYIAMGPSIAMGVITLGIFNQVLNAFGQVSDSFSFLMNSWTTIISLISIYQRLR
                     GFERQIPQATLVVANDYDDPRYLATETVPGAAAPAVVPE"
     gene            complement(2054..2671)
                     /gene="rpsD"
                     /locus_tag="VHZ56_08545"
     CDS             complement(2054..2671)
                     /gene="rpsD"
                     /locus_tag="VHZ56_08545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011179373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEX4298059.1"
                     /translation="MSKRIEAKHKIDRRLGENLWGRPASPLNARAYGPGQHGQRRKGK
                     TSDYGLQLRAKQKLKGYYGSITEKAFKKLYTEAARIKGDTGERLIGLLESRLDAIIYR
                     AKFVPTVFAARQFVSHGHIRVNGKRVNIPSYQVKPGDKVELKEKSKQLGIVLEASQLA
                     ERDVPEYVEVDHGKGVATYVRVPALADVPYPVQMEPNLVVEFYSR"
     gene            2896..3189
                     /locus_tag="VHZ56_08550"
     CDS             2896..3189
                     /locus_tag="VHZ56_08550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298060.1"
                     /translation="MTRIAIVAALIAFGCLPASPALANRPDGQTTLPMDSPLLDRMCG
                     NYLHNCVWCSNATGNCYQVTGCDGTHCTIKIMFPNVVSKPKGNGRTANAPMPG"
     gene            complement(3192..4436)
                     /locus_tag="VHZ56_08555"
     CDS             complement(3192..4436)
                     /locus_tag="VHZ56_08555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4298061.1"
                     /translation="MPPDSAAAAAPSSQAFAYRDYRFFWAATALTSFAAQIMAVGVGL
                     QVYLLTRNAFYLGLVGLATFTPALLLVLFTGLVADRFNRRIIIAVTGCVEFVAAITLL
                     FYSGANADQVWPVFVVLVCLGTARAFTGPAASSLAPNVVPPEALASAVSLNASAWSAA
                     NILGPVVGGVLASLSLQLAFGTAALFSVLAVTSVLMIAAPKQKISHQATSVTTLLAGF
                     RYIWHEKVVLGAISLDLFAVLLGGATALMPIFALDVLHVGASGLGLLRAAPGIGAIPT
                     ALYLARSPIRSHAGHILFVFVALFGLFTVVFGLSQWIWLSFPMLVLMGACDMVSVSIR
                     ETLMQLWTPDEVRGRVNAVNSVFIGASNEVGEFRAGTMAAFIGAVAAVAIGGVATMAV
                     SLIWSRAFPGLRKAQRLDRREA"
     gene            complement(4495..5004)
                     /locus_tag="VHZ56_08560"
     CDS             complement(4495..5004)
                     /locus_tag="VHZ56_08560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HEX4298062.1"
                     /translation="MATIAKPTIAKPTKTPARTTGKTTAKTTKTRGSSLFSQEERDAM
                     REYVDEKKAGKGAKKEDGAAQVQAAIAKMADADRRLAERVHTIVMAAVPELEPKTWYG
                     MPAYAKDGQTICFFQNAGKFKARYSTLGFSDKARLDDGNMWPASFALLKLSAADEKRI
                     AELVKTAVG"
     gene            complement(5024..5416)
                     /locus_tag="VHZ56_08565"
     CDS             complement(5024..5416)
                     /locus_tag="VHZ56_08565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006203349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX4298063.1"
                     /translation="MKIKLTTIYVDDQDKALKFYTDILGFAKQADFSNGPYRWLTVVS
                     ADEPNGTELQLASSDNPAGKAYQQAIFQQGQPAVMFYSDDIKADCERIKARGGRFRMD
                     PTEVTGSTIAQIEDGAGNLVQITQLKRW"
     gene            complement(5445..5870)
                     /locus_tag="VHZ56_08570"
     CDS             complement(5445..5870)
                     /locus_tag="VHZ56_08570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018242336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX4298064.1"
                     /translation="MTAAGTETRSVLLERELASPPEKIWRALTQPHLIEEWLMKTDFK
                     PVPGQRFTLRRDPRPDTSVVIDCEVLAVEPNQKLSYSWEAFGLESVVTFTLTPTSTGT
                     HLRVEQSGFRPDQDRAFKGATASWRQFIAALEELLHRQP"
     gene            complement(5867..6190)
                     /locus_tag="VHZ56_08575"
     CDS             complement(5867..6190)
                     /locus_tag="VHZ56_08575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX4298065.1"
                     /translation="MPDGHDMLFRTLADPTRRAIFERLCREGEQTVVALTSRAGISQP
                     AVSKHLGVLKLAGLVRDRREGRLTHYSAQPRALAPLLDWTSQMADFWEGRIDDLESLL
                     KRMDQ"
     gene            complement(6254..>6835)
                     /locus_tag="VHZ56_08580"
     CDS             complement(6254..>6835)
                     /locus_tag="VHZ56_08580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HEX4298066.1"
                     /translation="TEAAIADLSLVYATTARRRDLQKPVLGPEVAAQRVIAHIATGGA
                     AGILFGRERWGLYNEEVAISDAIVTLPVEAAFASLNIAQAVLVIAYEWRRQTELGQQL
                     LFGETVAEPATKGELLQFFEHLEQALDEAGFFTAPDKRPTVVNNLRAMLSRGTLSAQE
                     VRTLHGVVSSIERKHERPKANRPGRGQDGEPTR"
BASE COUNT         1132 a         2224 c         2259 g         1220 t
ORIGIN      
        1 ttcatgaaga aggtctcgag gctgtcctcg cgatggtggc ccagcaccag cgccgagcag
       61 ccctcctcgc gcgcgatgcg atagaggtgg ccgcgccgca gccgcgagca gagcgagcaa
      121 taagtcgcgc cttccggcag cttgtcggtg acgatcgaat aagtgtcgcg atactcgatg
      181 cggtgcgcga tgccgtgggc attgagaaag tcgggaagca cgttcttggg gaagtttggc
      241 tggccctggt cgagattgca cgccagcaac tccaccggca gcagcccacg ccatttgagg
      301 tccagcagca cggcgagcag cccgtagctg tccttgccgc ccgacagcgc caccagccag
      361 cgctcgcccg gccgcaccat ggcgaatttg tcgagcgcct cgcgcgtcag ccggacgagg
      421 cgcttgcgca gcttgttgaa ctcgacggtc cgcggagcgt cgcggaacag cggatgggcg
      481 ccggccacat cctctgcgct cccttcgatc agctcctggg cgacgatctc gttcataaag
      541 ccggtctagc ggtttagcag acgccgcgaa aggcccgcat cgcctgagat tacattgcgg
      601 taaggccgcg cagtttcctt gctgactccc gttcctgtca gttagatggc gccaccccag
      661 gcgcgaggag aaaccgcccg tgtttcgttc attcttcccc cacccgacga acttcttcat
      721 ctcggcgatc gcgtggacgg cggtggcgat gacggcgtgg ttcaccatcg gctcgggcat
      781 ggagcaatat ctgagcgtgg gaccgtgggt ggcgatgcag ccgaccgacg caaatccggc
      841 gccattcttc aacgccgaca aggcgtggct ctacgagtac gtgatcgtcg cgggctatct
      901 gttttgcgtg ccgtggctgc tgttcaacga caaccgccgc tggcagtggt ggagcattgt
      961 cggcacggtc accatcatcg aggtcgtgta tttcaacgtg caggtgagcg cctggctcaa
     1021 cgactggtac ggcagcttct acgacctcat ccaggcagct ttgggcaagc ccaattcggt
     1081 cagcttcgac cagtacatgg cgcagatctg gaccgtcgcc atcgtcctcg cggtcaacgt
     1141 cttcgtcctg gtgatcaacg ccttcctgaa cgcgcactac ctgttccgct ggcgccgggc
     1201 gatgtcgttc tactacatgg ccaactggca gcaggtccga accatcgagg gggcggcgca
     1261 gcgcatccag gaggacacgc agaacttctc ctcgatcgtc gagggcatcg gcctcaacat
     1321 cgtttcgtcg ttcatgacgc tgatcgtctt cctgccgatc ctgtgggacc tgtccggcaa
     1381 ggtcgccgac atgccctgga tcggccacgt ccagggcagc ctcgtctggc tggcgctggc
     1441 gcaggcgatc atcggaacgc tgctgttcgc cgtcgtcggc gtgcgcctgc cggggctgca
     1501 attcgccaac cagcgcgtcg aggcagcgtt ccgcaaggag ctggtcttcg gcgaggacga
     1561 cccgacacga gcgcagccga tcaccgtccg cgagctgttc cgcaacgtgc agcggaacta
     1621 cttccggatc tatttccact acacctactt caacgtcgcc cggtacgcct tcatcaacgc
     1681 ggcacagttc ttcccgtaca tcgccatggg cccgtcgatc gcgatgggcg tgatcacgct
     1741 gggcatcttc aaccaggtcc tcaacgcctt cgggcaggtg tcggattcgt tcagcttcct
     1801 gatgaactcg tggaccacga tcatcagcct gatctcgatc taccagcgcc tgcgcggctt
     1861 cgaacggcag attccgcagg cgacgctcgt cgttgccaac gattatgacg acccgcgcta
     1921 cctcgcgacc gagacggtgc cgggcgccgc ggcccccgcc gtcgtcccgg agtaggattg
     1981 cggcgcgccg tcggcgtaaa acaaaaaggc cgcccatcgg gcggcctttt tgcaatcctg
     2041 cgagctgaac cgatcagcgc gagtagaact cgaccacgag gttcggttcc atctgcaccg
     2101 ggtacggcac gtcggccagc gccgggacgc gcacataggt cgcgacgccc ttgccgtgat
     2161 cgacctcgac gtactccggc acgtcgcgct cggcgagctg gctggcctcg agcacgatgc
     2221 cgagctgttt cgacttttcc ttgagctcga ccttgtcgcc cggcttgacc tggtacgacg
     2281 ggatgttgac gcgcttgccg ttgacgcgga tgtggccgtg gctgacgaac tggcgcgccg
     2341 cgaacacggt cggcacgaac ttggcgcggt agatgatggc gtcgagacgg ctctcgagca
     2401 ggccgatcag gcgctcgccg gtgtcgccct tgatgcgcgc ggcctcggtg tagagcttct
     2461 tgaaggcttt ctcggtgatc gagccgtagt agcccttgag cttttgcttg gcccgcagct
     2521 gcaggccgta gtcggaggtc ttgcccttgc ggcgctggcc gtgctggccg ggaccatagg
     2581 cgcgggcgtt gagcggcgag gccggacggc cccacagatt ttcgcccaga cggcggtcga
     2641 tcttgtgctt ggcttcaatg cgcttcgaca tcgtaatcct ttcagatggt cgaaagtgat
     2701 tgcgccctcc tctgccccgc cttgcgacgg agccgacaga ttccaccaga ttttgggaat
     2761 cccgggtgcg cttcacgggc caaaagcccg gaaagtggcg gtcaggtacc ggctggaggt
     2821 gccgaagtca agcctcgccg gcttgacagc tggtcaccgc cggtgtgcag attgccgcgg
     2881 aagagggatc tcgccatgac ccggatcgcc atcgtcgccg ccctgatcgc tttcggttgc
     2941 ctccccgcga gcccagcact cgccaatcgg ccggatgggc agaccaccct gcccatggac
     3001 tcgccactgc tcgacaggat gtgcggcaac tatctccaca attgcgtctg gtgctcgaac
     3061 gccaccggca actgctatca ggtcaccggc tgcgacggca cccactgcac gatcaagatc
     3121 atgtttccca acgtcgtcag caagccgaag ggcaatgggc ggaccgccaa cgctccgatg
     3181 cccggctgag ctcaagcctc gcgccgatcc agccgctgcg ccttgcgcag cccggggaaa
     3241 gcccggctcc agatcagcga cacggccatc gtggcgacgc cgccaatcgc cacggccgcg
     3301 accgcaccaa tgaacgccgc catcgtcccg gcgcggaatt cgccgacttc gttggaggcg
     3361 ccgatgaaca ccgagttgac ggcgttcacc cggccgcgaa cctcgtcggg cgtccacagc
     3421 tgcatcagcg tctcgcggat cgagaccgag accatgtcgc aggcccccat cagcaccagc
     3481 atggggaagc tcagccagat ccactgcgag agcccgaaga cgacggtgaa cagcccgaac
     3541 agcgccacga acacgaagag gatgtggccg gcgtgactgc ggatcggcga gcgcgccaga
     3601 tagagcgcgg ttgggatggc accgatgccg ggcgctgcgc gcagtagccc gaggccgctg
     3661 gcaccgacat gcaacacatc gagcgcaaat atcggcatca gcgcagtggc gccgcccagc
     3721 agcaccgcga agagatcgag cgagatggcg cccagcacca ccttttcgtg ccagatgtag
     3781 cggaagccgg cgagcagcgt ggtgacgctc gtcgcctggt gcgagatttt ctgcttgggc
     3841 gccgcgatca tcaacacgct ggtcaccgcc agcaccgaga acagcgcggc ggtgccgaag
     3901 gcgagctgca gcgacaggct cgccagcacg ccgccgacca ccggtccaag gatattggcg
     3961 gcggaccacg ccgaggcgtt gagcgagacc gcgctcgcca gcgcctccgg cggcacgacg
     4021 ttgggggcga gcgatgaggc ggcggggccg gtgaaggcgc gggccgtgcc gaggcagacc
     4081 agcaccacga acaccggcca gacctggtcg gcattggcgc cgctgtagaa cagcagggtg
     4141 atggccgcga cgaactcgac gcacccggtg acggcgatga tgatccggcg gttgaagcgg
     4201 tcggcgacca gcccggtgaa cagcacgagc agcagcgccg gggtgaacgt cgcgagcccg
     4261 acgaggccga ggtagaacgc gttccgcgtc agcaggtaga cctgcagccc cacacccacc
     4321 gccatgatct gcgcggcaaa gctggtgagc gcggtggcgg cccagaagaa gcgatagtcg
     4381 cggtaagcga aggcctgcga cgagggcgcg gcagcggcgg cggaatctgg cggcattgtg
     4441 gcggagcgtt tggcatgccg gccgcaggca gtcaaacgcc cgccgccgcc aggctcagcc
     4501 gaccgccgtt ttcaccagct cggcaattcg cttctcgtcc gccgcgctga gcttcaggag
     4561 ggcaaaggaa gcgggccaca tgttgccgtc gtccagccgg gccttgtcgc tgaaaccgag
     4621 cgtcgaatag cgggccttga acttgccggc gttctggaaa aagcagatcg tctggccgtc
     4681 cttggcgtag gccggcatcc cgtaccaggt cttgggttca agctccggga cagcggccat
     4741 gacgatggtg tggacgcgct cggccagtcg ccgatcggcg tcggccatct tcgcgatcgc
     4801 cgcctgcacc tgggcggcgc cgtcctcctt cttcgcaccc ttcccggcct tcttctcgtc
     4861 gacgtactcg cgcatcgcgt cgcgctcttc ctggctgaag aggctggacc cgcgggtttt
     4921 ggtggtcttg gcggtggtct tgccggtggt cctggcgggg gtcttggtcg gcttggctat
     4981 ggtcggcttg gctatggtcg ccattgttgt ctcctgcttg ctgctaccag cgcttgagct
     5041 gggtgatctg gacgagattg ccggcgccgt cttcgatctg ggcgatggtc gagccggtga
     5101 cctcggtggg gtccatcctg aaccggccgc cgcgcgcctt gatgcgctcg cagtcggcct
     5161 tgatgtcgtc ggagtagaac atcacggcgg gctggccctg ctggaagatc gcctgctggt
     5221 acgccttgcc cgccggattg tcgctgctcg cgagttgcag ttcggtgccg ttcggctcgt
     5281 ccgccgaaac caccgtcagc cagcgatagg gaccgttact gaagtcggcc tgcttcgcga
     5341 agccgaggat gtcggtgtag aatttcagcg ccttgtcctg gtcgtccacg tagatcgtgg
     5401 tcagcttgat cttcatcgcg gtctcctttg atctggtcgg acgctcaagg ctggcggtgc
     5461 agcagctctt cgagcgctgc gatgaactgc cgccatgacg ccgtagctcc cttgaaggcc
     5521 ctgtcctggt ccggccggaa accggactgc tccacccgca aatgcgtgcc ggtgctggtc
     5581 ggagtcagcg tgaacgtcac cacgctttcg agcccgaagg cctcccagct gtaggacagt
     5641 ttctggttgg gctcgacggc aaggacctcg cagtcgatga cgacgctggt gtcgggtcga
     5701 ggatcgcggc gcagggtgaa gcgctggccg ggaacgggct tgaaatcggt cttcatcagc
     5761 cactcctcga tcaggtgcgg ctgggtcagg gcgcgccaga ttttctcggg cggggacgcc
     5821 agttcgcgct cgaggaggac ggatcgggtc tcggttccgg ccgcggtcac tggtccatcc
     5881 tcttcagcag gctctcgagg tcgtcgatcc gcccctccca gaaatccgcc atctggctgg
     5941 tccagtcgag gagcggggca agcgcccggg gctgggcgct gtagtgggtc agccgccctt
     6001 cgcgacgatc gcgcacgagg ccggcgagct tcagcacgcc gaggtgcttg gagacggcgg
     6061 gctgcgagat tccagcccgc gacgtgaggg cgacgactgt ctgctcccct tcccggcaca
     6121 ggcgctcgaa gatcgctcgc cgggtgggat cggccagagt cctgaagagc atgtcgtggc
     6181 cgtccggcat cgatcaataa cccgatagct attgattgac gtataaccag cgagctatgc
     6241 gtccgtcaag cgactatcgg gtcggctcgc cgtcctggcc ccgtccgggt cggttggcct
     6301 tgggccgctc gtgcttgcgc tcgatcgagg agaccacgcc gtgcagggtg cggacctcct
     6361 gggcggagag cgtgccacgg ctcagcatgg cgcgaaggtt gttgaccacg gtcgggcgct
     6421 tgtcgggggc ggtgaagaag ccggcctcgt cgagagcctg ctcgagatgc tcgaagaact
     6481 gcaggagctc gcccttggtc gccggttcgg ccaccgtctc gccgaacagc aattgctggc
     6541 cgagttccgt ctgccgccgc cactcgtagg cgatgaccag cacggcctgg gcgatgttca
     6601 acgaggcaaa tgccgcctcg accggcagcg tgacgatggc gtcgctgatc gccacttcct
     6661 cgttgtagag gccccagcgc tcgcggccga acaggatacc ggcggcgccg ccggtggcga
     6721 tgtgggcgat cacccgctgc gccgcaacct ccggcccgag caccggcttc tgcaggtcgc
     6781 ggcggcgggc agtggtggca tagaccagcg acaggtcggc gatcgccgct tcggt
//
LOCUS       DATAZA010000338         6641 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2011514, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000338 DATAZA010000000
VERSION     DATAZA010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6641
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2011514"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..284)
                     /locus_tag="VHZ56_08585"
     CDS             complement(<1..284)
                     /locus_tag="VHZ56_08585"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010660980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEX4298067.1"
                     /translation="MTRCHWAGDSPDYIAYHDDEWGRPVVDDHRLFEKLCLEGFQSGL
                     SWLTVLRKREQFRKQFKNFDPRKVARMTPADVDRLLLDAGIIRHRGKIEST"
     gene            410..1006
                     /locus_tag="VHZ56_08590"
     CDS             410..1006
                     /locus_tag="VHZ56_08590"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEX4298068.1"
                     /translation="MRARLTAGFVALSLAAFSLTPAIADPFFGGPGGLVLNPNGQMDR
                     VPLRVHLDRKFMRQIVDYDTREVAGTIVVNTGEKFLYLVLGNGKALRYGIGTARTGFE
                     WGGVHVVTNKREWPDWTPPAEMLARQPGIPTHMAGGLGNPLGARALYIGSTLYRIHGT
                     NEPWTIGTDVSSGCIRLINADIVDLYSRVKIGAKVIVL"
     gene            1058..2917
                     /locus_tag="VHZ56_08595"
     CDS             1058..2917
                     /locus_tag="VHZ56_08595"
                     /inference="COORDINATES: protein motif:HMM:NF027516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquitin-activating E1 FCCH domain-containing
                     protein"
                     /protein_id="HEX4298069.1"
                     /translation="MQRLTELLARFRKDERGAFMVLFAVLALVLIATSGAVVDFTNTE
                     TARSRAQTALDAAALALQTQMSTQTTTQLKTKAQAILTQHLNDTTITATVNSVTVDTV
                     AGKIDLAASLTVPTYFVQLVGVHSISSNLTSEATRGSKDIEVSVALDTTGSMAGEKIT
                     ELINATNTLIDLVVQTTQTPTYSKMAIIPWTQGVNVGSAYATSIRGPVTGSTPITAAT
                     WMSGTNYTVSAITKANPAVITTSAANGFAAGSYIYLSNISGMTQVSNTIYKVGTVQST
                     TKFTLQTTSGSNVNSSSYSTFSTSGSPRVTKCLNTGCIVTVTSTAHGLANGDNVYITS
                     VGGMTGLNSASGTVHPVGTTTTNTFQVTDETAATLGMTLYTSGGNAYCVKYGCLYYYF
                     TSAAGGHNLYQVNNCPTERSGANAFTDVAPSTTRFNYNYVSGGSDCITQTIQPLTSNK
                     TTLHNLANSLTAANSTAGHLGLAWGWYMISPNFGYLWPTASQPAAYGRANLIKAVVLM
                     TDGEFNIQYCNGVLSSDSINGTSSQKINCSAPDGTSQNQAVALCNGIKAAANDTVLYT
                     VGFDLEGDTNAINLLRTCATSPADFFQATAGTSDLTTDFTAIAQDLNNLRISK"
     gene            complement(2921..3139)
                     /locus_tag="VHZ56_08600"
     CDS             complement(2921..3139)
                     /locus_tag="VHZ56_08600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298070.1"
                     /translation="MTAIARTAPRPSAPAVRLVTRDGRRIPVDAVPAVDAPEAILAIS
                     FDGLTEAEQRAALAAFPGGRRFKLVRAG"
     gene            3263..3505
                     /locus_tag="VHZ56_08605"
     CDS             3263..3505
                     /locus_tag="VHZ56_08605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298071.1"
                     /translation="MSVARYFVFPRERDWVVMLDGQPIGHHGSRKQALNSAIVMADLM
                     GSMRHDADVMVQDEDGLRLAWSYGQDPLPQPAEAAA"
     gene            3502..3753
                     /locus_tag="VHZ56_08610"
     CDS             3502..3753
                     /locus_tag="VHZ56_08610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298072.1"
                     /translation="MSNPLMYFWRHPRRTGFIVFNLVVIAALLGWAEFTKGMTQEGIA
                     GVPNVMLGYTGMGFVLVAWIVGWLAWGVMVTSRHAKQKG"
     gene            complement(3750..4061)
                     /locus_tag="VHZ56_08615"
     CDS             complement(3750..4061)
                     /locus_tag="VHZ56_08615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298073.1"
                     /translation="MTTEIERFIRIESLKPSPGGPGRWHTVPNCTRLRVWHMAVADAL
                     GDEAPEDASPKRFIFHIGYVDGIARGFRVNYLGESFTILGVSDSTRLRGLELRCAPVA
                     A"
     gene            complement(4143..5063)
                     /gene="pcaQ"
                     /locus_tag="VHZ56_08620"
     CDS             complement(4143..5063)
                     /gene="pcaQ"
                     /locus_tag="VHZ56_08620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014530105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001228 - DNA-binding transcription
                     activator activity, RNA polymerase II-specific [Evidence
                     IEA];
                     GO_process: GO:0019619 - 3,4-dihydroxybenzoate catabolic
                     process [Evidence IEA];
                     GO_process: GO:0045893 - positive regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pca operon transcription factor PcaQ"
                     /protein_id="HEX4298074.1"
                     /translation="MADIPVKFRHLRTFVEVARQKSVGRAAEVLHVSQPAVTKTLREL
                     EAAIGATLVERDGRGIRVTAFGEVFLQHAGASLAAIQRGIDSVARARATGGPPLRIGA
                     LPTVSSRIMPAAIENFLARRTGSAVKIVTGENVALLEQLRLDQLDLVVGRLAAPEQMV
                     GLNFVHLYTERVVFVVRAGHPLLGTRRFDFARIRDFTVLMPTQGSIIRPFVERFLIAH
                     GIADIPVEIETISDSFGRAMTRQSDAIWIISEGVVAADRDLGELEVLPIDTAETRGAV
                     GLTTRADGPELPAARLFSTGIRETVKRLRL"
     gene            5178..6494
                     /locus_tag="VHZ56_08625"
     CDS             5178..6494
                     /locus_tag="VHZ56_08625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004107497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4298075.1"
                     /translation="MTERSAHPTPRGALTRRGFIASTAAAGAALAIGGHTTYAAAADT
                     LKVGFISPRTGPLGGFGEGDGYILDLAKKALAGGLKVGDKTYAVTIIDQDTQSDPARA
                     GQLAKDLINNQGIDMMLTTSTPEVVNPVSDACEAAGVPCIGTIVPWEAFYFGRGAKPG
                     QPSPFKWTYCFSFGTGTFAKTYLSMWPQVPTNKKIGVMYPNDADGNAIRAALGPLLEK
                     GGYTLVDPGAYEDGTTDYSAQIQKFKDEGVEIFNTFPIPPDFAAFWHQAAQQGLTKQI
                     KIAQIAKTGLFPSDIEAVGDLGDKLATAAYWHPTFPYKSSLTGIAGKDLADGYTAASG
                     KQWQQQLGASLSLLDAGFAALAASGNPNDKASVAKAISTLNTTTIVGKVDFTSGPVPN
                     VSETPIIGAQWVKAASGSKFQFDLVIVDNAPDPNVPIAAKLLAYNS"
BASE COUNT         1215 a         2216 c         2178 g         1032 t
ORIGIN      
        1 gtcgattcga tcttgccgcg atgccggatg atgccggcgt cgagcagcag ccggtcgacg
       61 tcggccggcg tcatgcgggc gaccttcctg gggtcgaagt tcttgaactg cttgcggaac
      121 tgctcgcgct tgcggagcac cgtcagccag ctcaggccgg actggaagcc ctcgaggcac
      181 agcttttcga acaggcggtg gtcgtcgacg accggccgcc cccattcgtc gtcgtggtag
      241 gcgatgtaat ccggactgtc cccggcccag tggcagcgcg tcatcttaac atccccgaaa
      301 ccataagccg cggcaatggc ttaaccatga agcttcacgt cgcgttggcg gttttccacg
      361 acagttgggt aagcctaatc gatcgttgcc tcaagcggga cattgcacca tgcgcgcgcg
      421 cctcacagcc ggttttgtcg ccctctccct cgcggctttt tcgctgacgc cagccatcgc
      481 cgatccgttc ttcggcggcc ccggcgggct cgtgctcaac ccgaacgggc agatggaccg
      541 ggtgccgctg cgggtgcatc tcgaccgcaa attcatgcgc cagatcgtgg attacgacac
      601 ccgcgaggtg gccggcacga tcgtcgtcaa caccggcgag aagttcctct atctcgttct
      661 gggcaatggc aaagcgctcc gctacggcat cggcacggcg cgcaccggct tcgagtgggg
      721 cggggtgcat gtcgtcacca acaagcggga gtggccggac tggacgccgc ccgccgaaat
      781 gctggcgcgg cagcccggca ttcccaccca catggcgggc gggctcggca atccgctggg
      841 cgcccgggcg ctctatatcg gcagcacgct ctaccgcatc cacggcacca acgagccctg
      901 gacgatcggc accgacgtgt cgtcgggctg catccggctg atcaacgccg acatcgtcga
      961 cctttacagc cgggtgaaaa ttggcgcgaa ggtgattgtt ctttagttag gaattttcgg
     1021 cagactgacg gctccaaaac caccgggccg tcgggtcatg cagcgtctca ccgaacttct
     1081 cgcccgcttc cgcaaggatg agcgcggtgc cttcatggtg ctgttcgcgg tgctggcgct
     1141 ggtgctgatc gccacctccg gcgccgtcgt cgacttcacc aacaccgaga cggcgcgctc
     1201 acgggcgcag acggcgctcg acgcggcggc gctggcgctg cagacgcaga tgagcacgca
     1261 gaccaccacg cagctcaaga ccaaggcgca ggcgatcctc acccagcacc tcaacgacac
     1321 cacgatcacg gcgacggtga actcggtgac ggtcgatacc gtggcgggca agatcgatct
     1381 cgccgcctcg ctgacggtgc cgacctattt cgtgcagctg gtcggcgtgc acagcatcag
     1441 ctcgaacctg acgtcggagg cgacgcgcgg ctccaaggac atcgaggtgt cggtggcgct
     1501 cgacaccacg ggctcgatgg cgggcgaaaa gatcaccgag ctcatcaacg ccaccaacac
     1561 gctgatcgac ctggtggtgc agacgacgca gacgccgacc tactcgaaga tggcgatcat
     1621 cccgtggacg cagggggtga atgtcggatc ggcctacgcc acctccatcc gtggcccggt
     1681 gacgggcagc acgccgatca ccgccgccac ctggatgagc ggcacgaact acacggtcag
     1741 cgccatcacc aaggccaatc ccgccgtcat caccaccagc gcggccaacg gcttcgccgc
     1801 cggcagctac atctatctca gcaatatcag cgggatgacg caggtctcga acaccatcta
     1861 caaggtcggg acggtgcaat cgacgacgaa gttcacgctg cagacgacga gcggcagcaa
     1921 cgtcaacagc tcgtcgtaca gcacgttttc cacctccggc agcccgcgcg tcaccaagtg
     1981 cctcaacacc ggctgcatcg tgacggtgac gtcgaccgcc catggcctcg ccaacggcga
     2041 caacgtctac atcaccagcg tcggcggcat gaccggcctc aacagcgcca gcggcacggt
     2101 tcacccggtg ggcacgacca cgaccaacac gttccaggtg accgacgaaa ccgcggcgac
     2161 gctgggcatg accttgtaca ccagcggcgg caacgcttac tgcgtgaagt acggctgcct
     2221 ctactattac ttcaccagcg ctgccggcgg gcacaacctc taccaggtga acaactgccc
     2281 gaccgagcgc tcgggggcga acgccttcac cgatgttgcc ccgagcacga ccaggttcaa
     2341 ctacaactac gtcagtggcg gcagcgactg catcacccag acgatccagc cgctgacctc
     2401 gaacaagacg acgctgcaca acctcgccaa ctcgctgacg gccgccaatt cgaccgccgg
     2461 ccacctcggg ctcgcctggg gctggtacat gatctcgccg aatttcgggt atctgtggcc
     2521 caccgcgagc cagccggcgg cctacgggcg ggccaacctg atcaaggccg ttgtgctgat
     2581 gacggacggc gagttcaaca tccagtactg caacggcgtc ctgtcatcgg actcgatcaa
     2641 cggcacgtcg tcgcagaaaa tcaactgcag cgcgcctgac ggcacgtcgc agaaccaggc
     2701 cgtggcgctg tgcaacggga tcaaggctgc cgccaacgac accgtcctct acacggttgg
     2761 attcgatctc gagggcgaca ccaacgccat caatctgctg cggacctgcg cgacatcgcc
     2821 ggcggatttt ttccaggcga cggccggcac gagcgacctg acaaccgact tcacggcgat
     2881 cgcccaggac ctcaacaacc tgcgaatatc gaaatagcgc tcagccggcg cggaccagct
     2941 tgaagcggcg gccgccggga aacgcggcga gcgcagcgcg ctgctcggct tcggtgagcc
     3001 catcgaagct gatggcaagg atcgcctccg gggcgtccac tgccgggacg gcgtcgacgg
     3061 ggatgcgccg gccgtccctg gtgacaagcc ggactgccgg ggcggaaggt ctgggggccg
     3121 ttctggcgat agcggtcatc ggctgctcct gcgtcagcca tagtaacgac gcacagggcg
     3181 atcagtttcc acacgaggca gtgagccggc cgcaaccgcg gtggcatctg ccgcgttgtc
     3241 cggcggttcc atggaggggc aaatgagtgt cgcgaggtac tttgtcttcc cgcgagagcg
     3301 cgactgggtg gtgatgctgg acggccagcc gatcggccac cacggctccc gcaagcaggc
     3361 gctcaacagc gccatcgtca tggccgacct gatgggttcg atgcggcacg acgcggacgt
     3421 catggtgcag gacgaggacg gattgcggct ggcgtggagc tacggccagg atccgctgcc
     3481 gcagcccgcc gaggcggcgg catgagcaat ccgctgatgt acttctggcg gcacccgcga
     3541 cgcaccggct tcatcgtgtt caacctcgtg gtgatcgccg cgctgctggg gtgggcggaa
     3601 ttcaccaagg gcatgacgca ggaggggatc gccggggtgc ccaacgtcat gctgggctac
     3661 accggcatgg gtttcgtgct cgtggcgtgg atcgtcggct ggctggcgtg gggcgtcatg
     3721 gtgacgtcgc gccacgcgaa gcagaagggc taggctgcca ccggcgcgca gcgcagctcg
     3781 agcccgcgga gccgggtcga gtcggacacc ccgagaatgg tgaagctttc gccgagataa
     3841 ttgacccgga agccgcgggc gatgccgtcg acatagccga tatggaagat gaagcgcttc
     3901 gggctggcat cctccggggc ctcatcgccc agcgcgtcgg cgacggccat gtgccagacg
     3961 cgcaggcggg tgcaattggg cacggtgtgc cagcggccgg gacccccggg cgacggcttc
     4021 aggctctcga tccggatgaa gcgctcgatt tcggtcgtca ttggacaccg cgggacatgt
     4081 caaagtgtag gccacagcca ttgcgcaatt gctaagccgc cccgccggct tgcaacgatc
     4141 tttcacagcc ggaggcgctt cacggtttcg cggatgccgg tggagaacag ccgggcggcc
     4201 ggcagttcag gcccgtcggc gcgagtggtg aggccaacgg cgccgcgggt ttcggcggta
     4261 tcgatgggca gcacttccag ctcgcccagg tcgcggtcgg cggcgaccac gccttcggag
     4321 atgatccaga tggcatcgga ctgccgggtc atggcgcggc cgaaggaatc cgaaatcgtc
     4381 tcgatctcga ccgggatgtc ggcgatgccg tgggcgatga ggaagcgttc gacgaacggc
     4441 cggatgatcg agccctgggt cggcatcagg acggtgaagt cgcggatgcg ggcgaaatcg
     4501 aagcgccggg ttccgagcag cggatggccc gcgcggacga cgaacaccac ccgctcggtg
     4561 taaaggtgga cgaagttgag ccccaccatc tgttcgggcg cggccagccg gccgacgacg
     4621 aggtcgagct ggtcgagccg cagctgttcc agcagggcga cgttctcgcc ggtgacgatc
     4681 ttgacggcgc tgccggtccg ccgggcgagg aaattctcga tcgccgcggg catgatgcgc
     4741 gacgagacgg tgggcaacgc accgatgcgc agcggcgggc cacccgtcgc ccgggcgcgg
     4801 gcgacgctgt cgatgccgcg ctggatggcg gcaagactgg cgccggcgtg ctgcaggaac
     4861 acctcgccga aggcagtgac gcggatgccc cgcccgtcgc gctcgaccaa ggtcgccccg
     4921 atcgcggcct cgagttcgcg cagggtcttg gtcaccgccg gctggctgac gtgcagcact
     4981 tcggcggcgc gtccgacgct tttctggcgc gccacctcga cgaacgtgcg cagatggcgg
     5041 aactttaccg gaatatcggc cacggcataa ccctcgggtt atgagtacgg cagaatatat
     5101 cattttacca aaccaaatcg gcgttggacc atgccacggg atcaaggcgg ctcggccgcc
     5161 aagggaggag aacgaccatg actgaacgca gtgctcaccc aacgccgcgc ggcgcgctga
     5221 cgcggcgcgg cttcatcgcc tcgacggccg ccgccggcgc cgccctcgcg atcggcggtc
     5281 acaccaccta tgccgccgcc gccgacacgc tgaaggtcgg cttcatcagc ccgcgcaccg
     5341 gtccgctcgg cggcttcggc gagggcgacg gctatatcct cgacctcgcc aagaaggcgc
     5401 tcgcgggcgg cctcaaggtc ggcgacaaga cttacgcggt caccatcatc gaccaggaca
     5461 cgcagtcgga cccggcgcgc gccggccagc tcgccaagga cctgatcaac aaccagggca
     5521 tcgacatgat gctcaccacc tcgaccccgg aagtggtgaa cccggtatcg gacgcctgcg
     5581 aggccgcggg cgtgccgtgc atcggcacga tcgtgccgtg ggaggcgttc tatttcggcc
     5641 gcggcgccaa gccgggccag ccgtcgccgt tcaagtggac gtattgcttc agcttcggca
     5701 ccggtacctt tgccaagacc tatctcagca tgtggccgca ggtgccgacc aacaagaaga
     5761 tcggggtgat gtaccccaac gacgccgatg gcaacgccat ccgggcggcg ctcgggccgc
     5821 tgctcgaaaa gggcggctac acgctggtcg atccgggtgc ctacgaggac ggcaccaccg
     5881 actactcggc ccagatccag aagttcaagg acgagggcgt cgagatcttc aacaccttcc
     5941 cgatcccgcc ggatttcgcg gcgttctggc accaggcggc gcagcagggt ctgaccaagc
     6001 agatcaagat cgcgcagatc gccaagaccg gcctgttccc gtccgacatc gaggcggtcg
     6061 gcgatctcgg cgacaagctg gcgacggcgg cctactggca tccgacgttc ccctacaagt
     6121 cctcgctcac cggcattgcc ggcaaggatc tcgcggacgg ctacactgcc gcctcgggca
     6181 agcagtggca gcagcagctg ggcgcttcgc tgtcgctgct cgacgccggc tttgccgccc
     6241 tcgccgcctc gggcaacccg aacgacaagg cctcggtggc gaaggcgatc tcgaccctca
     6301 acaccaccac catcgtcggc aaggtcgact tcacgtccgg gccggtaccc aacgtgtcgg
     6361 aaacgccgat catcggggcg caatgggtca aggccgcatc tggaagcaag ttccagttcg
     6421 acctggtgat cgtcgacaac gcgcccgatc cgaacgtgcc gatcgcggcc aagctcctgg
     6481 cctacaacag ctgacggcag cgacggcagc aggcggatgg tgatggcggc gaccgggccg
     6541 atgctgatgg ctgaggggct ccacaagcgc tacggcgcgc tggtggtgct cgacggcgtc
     6601 gatttcggca tcggcgccgg cgaggcgatc ggcattgtcg g
//
LOCUS       DATAZA010000339        12002 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2127404, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000339 DATAZA010000000
VERSION     DATAZA010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 12002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12002
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2127404"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            761..2968
                     /locus_tag="VHZ56_08630"
     CDS             761..2968
                     /locus_tag="VHZ56_08630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007612322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEX4298076.1"
                     /translation="MSGITLSASVRQNLLSLQSTTDLLSQTQERLATGNKVNSALDNP
                     TNYFTSQSLNNRASDISNLLDGIGNGVQVLQAANTGITSLQSLVDTAKSIANQALQAT
                     SGYSTKSQVVSTAISGATASNLLGGSASNAVSLGTTNLGSIDLTGTLPGNATAAGTNN
                     LGTIDLTGTQPGNAVVTGASNLAPVDASGGDITFDVNGSTVTLSATGGTSSDGHYSAS
                     DIVSAINNQVGTSASVNASLVGGKLNIASTGTAGASDSVTVDNFSSSDATQLGFAGAS
                     ASANGTAAAPLASLTFKVNNQTVTLAGGSSYTAANIVSAINTQVGTSAHVAASLVGGK
                     LTLDSTGTAGASDAISVGTFSSSDATQLGFAGASVSTNGTAAAPLADLTFKVNNQTVT
                     LAGGSSYTAANIVSAINTQVGTTAHVNASLVGGKLSIASTGTAGASDTVAVNTFSSSD
                     ATQLGFASASESDSGADNAGGLAGLELKIASTAGGTASDITFGTGANQVSTLDGLNSA
                     LAANNLEASLDSTGKLTITTVNDDASETIGAISGSATSTVGSPFASAAVAGPSADTDA
                     QNLRANLVSQYNNVITQIQTTAQDSSFNGVNLLNGDQLKLVFNETGKSTLNIQGVTDD
                     PTGLGLSTLTGGTDFLDNASTNKVLSSLNDASNTLRSQASTLGSNLSIVQIRQDFSKN
                     LINVLQTGASNLTLADTNEEAANSQALSTRQSIAVSALALANQSQQSVLRLLQ"
     gene            3119..3556
                     /gene="flbT"
                     /locus_tag="VHZ56_08635"
     CDS             3119..3556
                     /gene="flbT"
                     /locus_tag="VHZ56_08635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0048027 - mRNA 5'-UTR binding [Evidence
                     IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA];
                     GO_process: GO:1902209 - negative regulation of
                     bacterial-type flagellum assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis repressor FlbT"
                     /protein_id="HEX4298077.1"
                     /translation="MSLKVELKPAERLIIGGCIITNGDQRTRLTIDGRLPILREKDIL
                     TPAQADTPAKLIYLAVQLMYLEGSFQASRTEYFSLVNAIATDQPACIPLLDEINNQIL
                     TNNLYKALKASKKLIQFEAKQSTHAESGGDGVPEHEPEHGSAT"
     gene            3495..3869
                     /gene="flaF"
                     /locus_tag="VHZ56_08640"
     CDS             3495..3869
                     /gene="flaF"
                     /locus_tag="VHZ56_08640"
                     /inference="COORDINATES: protein motif:HMM:NF009435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0044781 - bacterial-type flagellum
                     organization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis regulator FlaF"
                     /protein_id="HEX4298078.1"
                     /translation="MQNQAVTAYQNTSRSTVPQRDLEANLLSSAAAQFQRIMENWEQL
                     APELENALLFNRKLWTIFVTSVTDNESKLAMDVRQNVANLGVFVLTRTAEMRLAPEPD
                     KLDVLVRINRELAAGLRGSVAD"
     gene            complement(3942..4307)
                     /locus_tag="VHZ56_08645"
     CDS             complement(3942..4307)
                     /locus_tag="VHZ56_08645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298079.1"
                     /translation="MTSIYSILANNYAAVGSSVNYSKTKYVAVNAADYQGTWTGTFNT
                     NQKFTVQISNVQGFKATVKYQSGDTVNYQQVLIKDGQFRFGDSKFVLQSNGQALVATA
                     ITDPETGNVSVEQGYGSRS"
     gene            complement(4384..5895)
                     /locus_tag="VHZ56_08650"
     CDS             complement(4384..5895)
                     /locus_tag="VHZ56_08650"
                     /inference="COORDINATES: protein motif:HMM:NF012874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298080.1"
                     /translation="MTVINRTMYPLQSSMDLINKMTDQFSTLEQQLATGNKASTLADM
                     GSSRYQDLSLRASSSRIDSYSSSIDMVNTRLNVFNTVASQLSTVESSTSSSMTPSAYG
                     SSDGNFGSAPALASSNLDQVVNLLDTDVNGRYLFSGQDTDTVPVPDTQTLINGADGKA
                     GFAQVASERQQADVGDGLGRLTLSSAADTVTLAEDGATPFGFKLSTVTANSSAVSVTQ
                     PNGTAPQSTAIQFTGVPTAGDTVTVNMTLPDGTSDNVTLTAVSGTAGAGQFQIGADAD
                     STAANFQSALQGSLTTEAGTTLVAASNNEAANNFFNGQGQPVQRVQGPDFAHATALVT
                     ADPTNTVMWYQGGDAADARSSITAKIDDSTTISYGAQANENGTVNLVRGLAVMAIQNF
                     STSDATSAGRFDAIASRNQSRLSPTHDSEPGSINMLTVQLGNTQATVNTISTLHTAYQ
                     SQLQNAIGDIETVPQDQVASQLLALQTQLEATYQATALVSKLSLVNYLGSANL"
     gene            complement(5906..7750)
                     /gene="flgK"
                     /locus_tag="VHZ56_08655"
     CDS             complement(5906..7750)
                     /gene="flgK"
                     /locus_tag="VHZ56_08655"
                     /inference="COORDINATES: protein motif:HMM:TIGR02492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009424 - bacterial-type flagellum hook
                     [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HEX4298081.1"
                     /translation="MGLSTSLSNALSGMSVSQNALEIVSRNVSNAGTPGYHQQSLSVI
                     DTLGVNSIYARTGGVQRAFDTSLQASYTSATSNASYAATQLDTLNRLQTYVGQPGSTG
                     SLDSVYGSFETAMQALSTSPDDYSTRATAVSSAQALSSTLNSLSQDVQGLRQDTETQM
                     ASQVTTLNQSLSSLADVNAQLAGGGGNDSERAALEDQRDRLVSQVSEIVDVRVDYRSD
                     DTVGLSTRTGISILDAKPSTFSFQPAGTLTADKQFNVDPSKSGVGTLTLTTPSGSTID
                     LVQQNVLQSGSLAALVNLRDTTLVNAQSQLDSVAAGVAQSFSTVQTPGTAVTVGAKGG
                     YSADLSSIRDGNDFVLNYTQGGAQKSLRVVRVDDSSKLPLDYTDANGARVIGMSFAGG
                     ASGIATALGNVLGPGFTVSGSGSTLTVLDDGAASTTDVGSLTTDATVTGLQTGNSAFS
                     LFTDSGNSDFTNALDGKGQATGFASRIQVNSAILSNNNLLVQYDPTSSVGDPTRVNAV
                     LSQLQTMSFASPQTATGAPATFRVGGTVSDMISQTMNNVGSVAQSASTDNDTQQMTLD
                     SVNQRLSSEYGVNVDDEMARLIQLQNAYAANARIISTVQDLMGRLLDL"
     gene            complement(7777..10245)
                     /locus_tag="VHZ56_08660"
     CDS             complement(7777..10245)
                     /locus_tag="VHZ56_08660"
                     /inference="COORDINATES: protein motif:HMM:TIGR03506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein"
                     /protein_id="HEX4298082.1"
                     /translation="MGIYGALSTAVTGLSAQSFALDNISGNIANSQTIGFKRVDTSFL
                     DLIPDQPSKIQTSGSVLAQSQSTATEAGDVKSVTNATYMAVNGSGFFVVQPALGESDG
                     TPVFGGTSYYTRRGDFDVNKDGYLVNGSGYYLQGLPIDTKTGNISSSLPQVIRVSNSF
                     LPAQPTSTINYQLNLPQLPKDGTYQTSQTSGSELMQASDFETIPTDTAAATTGSATMA
                     SFTGKTTAFADGAAATGSAAASTIATNGDTLTVTIGSTAHTYHFTNTGGTDMTTGTID
                     ITDNVAGTDTVQGVLSAINTDLQTSDPTASASLVNGKIRIATGDTADNLTVANGTTGF
                     GLASATTAPTLSSSDAASRLASSGNTLTVTIGSVTRNYTFTNSGGTSGTTIDTTDAST
                     SNVGQVLAYIQSDLATAGATNAQVGLQSGQVHIASGNTTDTVTVADNTAGFGVGNVSA
                     TAGMTGTDPASRLAVAGNTLEVKVGSADRTYTFTTSGASSGTTINVNDPSTNTVAGVL
                     AAIQSDLQGNGAAGATVGLSSGKIAIAAGNLTDSITTADNTSGMGIGNVTKAPSVSTA
                     AEQSARVATISADDADTFDNQSISGGAITVYASNGAPANVQLRWAKIASSEVGGADRW
                     QLFYQSNSSATGSQPMWTNVGTDYTFGSDGALNPPISETDLSGVSVDGVSLGSIKLNF
                     GTGGITQFADPNGTAGVTALTQNGYSAGQYQSVAIDDSGRVVVSYDNGQTVQTAQVVT
                     ANFNAADSLKRMDGGIFAATADSGQPILNTSGGVIGSSLESSNTDISTEFTKLIVTQQ
                     AYAAGTKIVSTADDMLQQALNMIR"
     gene            10481..11356
                     /locus_tag="VHZ56_08665"
     CDS             10481..11356
                     /locus_tag="VHZ56_08665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HEX4298083.1"
                     /translation="MLFKSPDEFHDAPRHAVTVFGMAGVGKTRLAALLRKSQWFHYSV
                     DYRIGTRHMGEFIVDNFKAEAMKVPFLRELLRTDSIKIGSNITFANLDPLSTYLGRPG
                     NTAKGGLPIDEYRRRQQQHGAAEIAALLEVPRFIQRAHDLYGYDNFIADTGGSLIEVV
                     DLDNPADPVIRTIADSTALIYIRGTDKDAEELIRRFAHSPKPMYYQPAFLTRKWAEYK
                     KLNKIADDARVDPEKFGAWGFEALLHDRLPRYRKLADRFGYSIEAADLETVRDGEEFI
                     DLVTAAITDRMRKPG"
     gene            11391..>12002
                     /locus_tag="VHZ56_08670"
     CDS             11391..>12002
                     /locus_tag="VHZ56_08670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HEX4298084.1"
                     /translation="MPIRIPDNLPARKTLEHEGVVVMDSSRAARQDIRPLQIGLLNLM
                     PNKERTETQFSRLIGASPLQVDLTLVRVTDHKSKNTSEDYLKTFYSTWEDVRRHKFDG
                     FIITGAPVANLPFEEVRYWSEMVDIMDWTQTNVHRSMFICWGAQAALHHFHHARRYRM
                     DRKAFGVFRHHIVNPRSPWLRGFSDSPMIPVSRYNDIDRQSLGA"
BASE COUNT         1924 a         4242 c         3699 g         2137 t
ORIGIN      
        1 aggtcgcccg tgccgagcgg cccaagtcct atggcgccgg tggtgccctc aacaccgcgc
       61 agaagccggt cggcggcatc gccatcaacc gctcgctctg actcggttgg catttgactc
      121 aaaagccgcc accactctcc accacgctga gataagcgcc gcgtaagagc ccgccaggat
      181 cggatcgttc cgacccactg gacgggtgat cgtggcgacc aggatcgcag cgcaaccgat
      241 cggtagcgag ctcggcatcg ccggcttccg ttcgcgatcg ccgcagctgg agtcacgttc
      301 cactgacgac gctccgacgc cgatcgacct gcctccgccg gcctcccctc ctgttgggcc
      361 cgcactgccg ccgccactcg agtcgccgga cgatacattc gccgccgcgc tcgccgccga
      421 gcggaccccg tcgccgccgg caggtgccga ccagctgcga ctgcgccgaa ggccagcctg
      481 gactgccccc gactcgcccc tcaggctcac cgaccgcacc gcctgacgca cgtcgcgcaa
      541 cgttaacgcg gcgagcccgg cgccgctcac ccggcaggat ttgccggcct gcacaaacct
      601 ttgcgattac agcagcttgg ctgccccgcc aaccgcgccg cgcgacaccc aatatcgtta
      661 acgcaccccc tccgccctta accgttcttt acggagtcgg acgcaatatc gggcgaccgt
      721 ctcagaagag acgtccaaac ctagaagagg aagaatttta atgtccggca ttaccctttc
      781 ggcatcggtt cgccagaacc tgttgtcgtt gcagtcgacc accgacttgc tgtcgcagac
      841 gcaggagcgc ctcgcgaccg gcaacaaggt caacagcgcc ctcgacaacc cgaccaacta
      901 cttcacctcg cagtcgctca ataaccgcgc cagcgacatc tcgaacctgc tggatgggat
      961 cggcaatggc gtgcaggtcc tgcaggctgc caataccggc atcacctctc tgcagagcct
     1021 cgtcgacacc gccaagtcca tcgccaacca ggcgctgcag gcgacctcgg gctactcgac
     1081 caaatcgcag gtcgtgagca ccgcgatctc cggcgccacc gcctccaacc tgctcggcgg
     1141 ctcggcctcg aacgccgttt cgcttggcac caccaacctc ggcagcatcg acctgaccgg
     1201 caccctgccg ggcaatgcga ccgcagccgg caccaacaac ctcggcacca tcgacctgac
     1261 cggcacccag ccgggcaacg ccgtggtgac gggcgccagc aaccttgccc ccgtggacgc
     1321 ctcgggcggc gacatcacct tcgacgtcaa cggcagcacc gtcacgctgt cggcgaccgg
     1381 cggtacctcc agcgatggcc actactcggc ctccgacatc gtcagcgcca tcaataacca
     1441 ggtcggcacc agcgccagcg tcaacgcctc gctggttggc ggcaagctca acatcgccag
     1501 cacgggcaca gccggtgcga gcgactcggt cacggtcgac aacttctcgt cgagcgacgc
     1561 cacccagctc ggctttgccg gtgcgtcggc gtcggccaac ggcaccgcag cggcgccgct
     1621 tgccagcctg accttcaagg tcaacaacca gaccgtcacg ctcgccggtg gcagctccta
     1681 taccgctgcc aacatcgtct cggcgatcaa cacgcaggtc ggtacctcgg cgcacgtcgc
     1741 ggcctcgctg gtcggcggca agctgaccct cgacagcacc ggcaccgccg gcgcttcgga
     1801 cgcgatctcc gtcggcacgt tctcgtcgag cgacgccacc cagctcggct ttgccggtgc
     1861 ctcggtgtcg accaacggta cggcggcggc tccgctggct gacctgacct tcaaggtcaa
     1921 caaccagacc gtcacgctcg ccggtggcag ctcctatacc gctgccaaca tcgtctcggc
     1981 gatcaacacg caggtcggca ccacggcgca tgtgaatgcc tcgctggttg gcggcaagct
     2041 gtcgatcgcg agcaccggca ctgccggtgc ctccgatacc gtcgcggtga acacgttcag
     2101 ctcgagtgac gccacccagc tcggcttcgc tagcgcttcc gagtccgact ccggggccga
     2161 caatgccggc ggcctcgccg gcctcgaact gaagatcgcc tccacggctg gcggcaccgc
     2221 gtcggacatc acgttcggca ccggcgccaa ccaggtctcg actctcgacg gcctgaactc
     2281 ggccctcgcg gccaacaacc tcgaggcctc gctcgacagc accggcaagc tcaccatcac
     2341 gacggtgaat gacgatgctt cggagaccat cggtgcaatc agcggttcgg cgacctcgac
     2401 cgtcggctcg ccgttcgcca gcgccgccgt agccggcccc tcggccgata cggatgccca
     2461 gaacctgcgc gccaacctgg tttcgcagta caacaacgtc atcacgcaga tccagacgac
     2521 cgctcaggac tcgtccttca acggcgtcaa cctgctcaat ggcgatcagc tgaagctggt
     2581 gttcaacgag accggcaagt ccaccctgaa catccagggc gtgaccgacg atccgacggg
     2641 cctgggcctc tcgaccctga ccggcggcac cgacttcctc gacaacgcct cgaccaacaa
     2701 ggtgctgtcg tcgctgaacg atgcctccaa caccctgcgc tcgcaggcgt cgaccctggg
     2761 ttccaacctc tcgatcgtgc agatccgtca ggacttctcg aagaacctga tcaacgtgct
     2821 gcagaccggt gcgtcgaacc tgaccctcgc cgacaccaac gaggaagcgg ccaacagcca
     2881 ggcgctgtcg acccgccagt cgatcgcggt ctccgcgctc gccctcgcca accagagcca
     2941 gcagtcggtt ctccgcctgc tccagtaagc agcggttcac tatcgaatgc ggaaggcggg
     3001 cctcggcccg ccttcttgct tttggccggc gcgaattgag tttccggcca ccgccctgcc
     3061 gactacggtg ccgcaacgcg cgaatcgaac acttccggcg cgacgcgaaa ggaccgccat
     3121 gtcgctcaag gtcgaactca agcccgccga acggctgatc atcggcggct gcatcatcac
     3181 caacggcgac cagcgcaccc gcctcaccat cgacggccgc ctgcccatcc tgcgcgaaaa
     3241 ggacatcctg acgccggccc aggcggatac ccccgccaag ctcatctacc tggccgtgca
     3301 gctcatgtac ctcgagggca gcttccaggc gtcgcgcacc gaatatttct cgctggtcaa
     3361 tgccatcgcc accgatcagc ccgcctgtat cccgctgctc gacgaaatca acaaccagat
     3421 attaaccaac aatctttaca aggctctgaa ggcttccaag aagctgatcc agttcgaagc
     3481 aaagcaatcc acacatgcag aatcaggcgg tgacggcgta ccagaacacg agccggagca
     3541 cggttccgca acgtgatctg gaggccaatc ttctctcctc cgcagccgcg caattccagc
     3601 gcatcatgga gaattgggag cagctcgccc ccgagctcga aaatgccctg ctcttcaacc
     3661 gcaagctatg gaccatcttc gtcacctcgg tgaccgacaa tgaatccaag ctcgccatgg
     3721 atgtccgcca gaacgtcgcc aacctcggcg tcttcgtgct gacccgcacc gccgagatgc
     3781 ggctggcgcc ggagcccgac aagctcgacg tcctcgtccg catcaaccgc gagctcgccg
     3841 ccggccttcg cggttcggtc gccgactagg cttctgcgca gcgctgcaaa tgcaaacggc
     3901 acccctgggg tgccgttctt gcttgctagc ctggacgccc gtcagctgcg gctgccgtag
     3961 ccctgttcga cgctgacgtt gccggtctcc ggatcggtga tcgccgtcgc caccagcgcc
     4021 tgcccgttgc tctgcagcac gaacttgctg tcgccgaagc ggaactgccc gtccttgatc
     4081 agcacctgct ggtagttgac cgtgtcgccg ctctggtact tcaccgtcgc cttgaagccc
     4141 tgcacgttcg agatctgcac cgtgaatttc tggttggtgt tgaaggttcc cgtccacgta
     4201 ccctggtagt cggcggcatt gaccgccacg tacttggtct tggagtagtt cacgctggaa
     4261 ccgaccgccg cgtaattgtt ggcgaggatg ctgtagatgc tggtcaagat acgtcccttc
     4321 gcgagctttc gagaacccta ggctgaatcg gtaaatgcgg cattgccggc ggcgcgcgcg
     4381 ccgtcaaagg ttggcgctgc cgaggtagtt gaccagcgac agcttcgaca ccagcgccgt
     4441 cgcctggtag gtcgcctcga gctgcgtctg cagcgccagc agctggctcg ccacctggtc
     4501 ctgcggcacc gtctcgatgt cgccgatcgc attctgcagc tgcgactgat aggcggtgtg
     4561 gagggtggag atggtgttca ccgtcgcctg cgtattgccc agctgtaccg tcagcatgtt
     4621 gatcgagccc ggctcgctgt catgcgtcgg cgacagccgc gactggttgc gcgatgcgat
     4681 cgcatcgaac cgtccggccg acgtcgcgtc cgacgtcgag aaattctgga tcgccattac
     4741 agccagcccg cgcaccagat tgacggtgcc gttctcgttg gcctgcgcgc cgtagctgat
     4801 cgtcgtgctg tcgtcgatct tggccgtgat gctcgagcgc gcgtccgccg cgtcgccgcc
     4861 ctggtaccac atcaccgtgt tggtggggtc cgcggtcacc agcgccgtcg catgggcgaa
     4921 gtccgggccc tgcacgcgct gcaccggctg tccctggccg ttgaagaaat tgttcgccgc
     4981 ctcgttgttg gacgccgcca ccagcgtcgt ccccgcctca gtggtcagcg agccctgcag
     5041 cgccgactgg aagttcgccg ccgtgctgtc cgcgtcggcg ccgatctgga actgtccggc
     5101 gccggccgtg ccgctgacgg cggtgagcgt gacgttgtcc gaggtgccgt ccggcagcgt
     5161 catgttgacc gtcaccgtgt cgcccgctgt cggcacgccg gtgaactgga tggcggtcga
     5221 ttgcggcgcc gtcccgttcg gctgcgtgac cgacaccgcg ctgctgttgg ccgtcaccgt
     5281 cgacagcttg aacccgaacg gcgtcgcgcc gtcctccgcc agcgtcactg tatcggccgc
     5341 actcgacagc gtcagccgtc cgagcccgtc gccgacatcg gcctgttgcc gctccgacgc
     5401 cacctgcgcg aagccggcct tgccgtcggc gccgttgatc agcgtctgcg tatcgggcac
     5461 cggcaccgtg tcggtgtcct gcccgctgaa cagatagcgc ccgttgacgt cggtatcgag
     5521 caggttgacc acctggtcga ggttgctcga tgccagggcc ggtgccgagc cgaaattgcc
     5581 gtcgctgctg ccataggcgc tcggtgtcat cgacgagctc gtgctgctct cgaccgtcga
     5641 cagctgcgag gcgaccgtgt tgaacacgtt gagccgcgtg ttcaccatgt cgatgctgct
     5701 cgaatagctg tcgatccggc tcgagctcgc gcgcagcgac aggtcctggt agcggctgct
     5761 gcccatgtcg gccagcgtgc tcgccttgtt gccggtggcg agctgctgct ccagcgtgct
     5821 gaactggtcc gtcatcttgt tgatgaggtc catgctgctc tgcagcggat acatcgtccg
     5881 gttgatcacc gtcatctctg ggtcctcaca agtcgagcag ccggcccatc aggtcctgca
     5941 ccgtggaaat gatgcgggca ttggcggcat acgcattctg cagctggatc agccgcgcca
     6001 tctcgtcgtc gacattgacg ccgtactcgc tgctgagccg ctggttcacc gaatccagcg
     6061 tcatctgctg cgtgtcgttg tcggtcgacg ccgactgcgc cacgctgccg acattgttca
     6121 tggtctgcga aatcatgtcg ctgaccgtgc cgccgacgcg gaacgtcgcc ggcgcgccgg
     6181 tcgccgtctg cggcgacgca aagctcatcg tctgcagctg gctgagcacg gcgttgacgc
     6241 gggtcggatc gccgaccgag ctcgtcggat cgtactgcac cagcagattg ttgttgctga
     6301 ggatcgccga gttcacctgg atgcgcgagg cgaagcccgt cgcctggccc ttgccgtcga
     6361 gggcattggt gaaatccgaa ttgccgctgt cggtgaacag gctgaaggcg ctgttgccgg
     6421 tctggagacc cgttacagtt gcgtcggtgg tgagcgagcc gacgtcggtc gtgctggccg
     6481 caccgtcatc cagcaccgtc agcgtgctgc cgctgccgct gaccgtgaag cccgggccga
     6541 gcacgttgcc cagcgccgtg gcgatgccgc tggcgccgcc ggcaaagctc atgccgatga
     6601 cccgcgcgcc attggcgtcg gtgtagtcga gcggcagctt gctgctgtcg tccacccgca
     6661 ccacgcgcag cgatttctgc gccccgccct gcgtgtagtt gaggacgaaa tcgttgccgt
     6721 cgcggatcga gctcagatcg gccgagtagc cgcccttggc gcccacggtc acggctgtgc
     6781 ccggcgtctg caccgtcgag aacgactgcg ccacgcccgc cgcgaccgag tcgagctggc
     6841 tttgcgcgtt gaccagcgtc gtgtcgcgca aattcaccag cgccgccagc gaccccgact
     6901 gcagcacgtt ctgctgcacc aggtcgatgg tgctgcccga cggcgtcgtc agcgtcagcg
     6961 tgccgacgcc gctcttgctc ggatcgacat tgaactgctt gtccgccgtc agcgtgcccg
     7021 ccggctggaa gctgaaggtc gagggcttcg cgtcgaggat gctgatcccg gtccgcgtcg
     7081 acagccccac cgtgtcgtcg gagcggtagt ccacccgcac gtcgacgatt tccgagacct
     7141 gcgacaccag ccggtcgcgc tggtcctcga gcgccgcccg ctcgctgtcg ttgccgcctc
     7201 cgccggccag ctgcgcgttg acgtcggcca gcgagctcag cgactggttg agcgtcgtca
     7261 cctgcgacgc catctgcgtc tcggtgtcct gcctgaggcc ctgcacgtcc tgcgacagcg
     7321 agttgagcgt cgagctgagg gcctgcgccg acgacaccgc cgtcgcccgc gtcgagtagt
     7381 cgtccgggct cgtgctcagc gcctgcatgg cggtctcgaa cgagccatag acgctgtcga
     7441 gcgaccccgt gctccccggc tgcccgacat aggtctgcag ccggttgagc gtatcgagct
     7501 gcgtcgccgc gtagctggcg ttcgaggtgg ccgatgtgta cgacgcctgc aggctcgtat
     7561 cgaacgcccg ctgcacgccg ccggtgcgcg cgtagatcga gttgacgccg agcgtgtcga
     7621 tcacgctcag cgactgctgg tgatagccgg gcgtccccgc gttggagacg ttccgtgaaa
     7681 cgatctccag cgcgttctgg ctgaccgaca tgccggacag cgcgttgctg agggacgtac
     7741 tgagacccat gcggcgttac ctcaccggcc ccctgctcag cggatcatgt tgagggcttg
     7801 ctgcagcatg tcgtcggcgg tcgagacgat cttcgttccc gccgcatagg cctgctgcgt
     7861 cacgatcagc ttggtgaact ccgtcgagat gtcggtgttg gagctctcga gcgacgagcc
     7921 gatcaccccg ccgctggtgt tgaggatcgg ctgccccgaa tccgcggtgg ccgcgaagat
     7981 gccgccgtcc atgcgcttga gcgagtcggc cgcgttgaaa ttggccgtca ccacctgggc
     8041 cgtctgcacc gtctggccgt tgtcgtagga caccaccacc cggccgctgt cgtcgatcgc
     8101 gaccgactgg tactgcccgg cggagtagcc gttctgcgtc agcgccgtga cccccgcggt
     8161 gccgttcggg tcggcgaact gcgtgatccc gccggtgccg aaattgagct tgatgctgcc
     8221 cagcgacacg ccgtcgaccg acaccccgct gaggtcggtc tccgagatcg gcggattgag
     8281 cgcgccgtcc gagccgaacg tgtagtcggt gcccacattg gtccacatcg gctggctgcc
     8341 ggtggcgctg ctgttggact ggtagaacag ctgccacctg tcggctccgc ccacctcgct
     8401 cgaggcgatc ttggcccagc gcagctgcac attggccggc gcgccgttcg aggcatagac
     8461 ggtgatcgcg ccgcccgaga tcgactggtt gtcgaacgtg tcggcgtcgt ccgccgagat
     8521 cgtggcgacc cgcgccgact gttcggcggc cgtcgacacc gacggcgcct tggtgacatt
     8581 gccgatcccc atgccgctgg tgttgtcggc cgtggtgatg ctgtcggtca ggttgccggc
     8641 ggcaatcgcg atcttgccgc tgctgagccc gacagtcgcc cccgccgcgc cgttgccctg
     8701 caggtccgac tggatcgccg caaggacgcc cgccacggtg ttcgtcgagg gatcgttgac
     8761 gttgatcgtg gtgcccgacg aggcgccgct ggtggtgaac gtataggtgc ggtcggcgct
     8821 gccgaccttg acctcgagcg tgttgccggc gaccgccagc cggctcgccg gatcggtgcc
     8881 cgtcattccc gccgtcgccg agacgttgcc gacgccgaag ccggcggtgt tgtcggcaac
     8941 cgtcaccgtg tccgtggtgt tgccggaggc gatatgcacc tgcccgcttt gcagcccgac
     9001 ctgcgcgttc gtcgcgccgg ccgtcgcgag gtcagactgg atgtaggcca gcacctgccc
     9061 gacattggac gtcgatgcat cggtggtgtc gatcgtcgtc cccgacgttc cgccggaatt
     9121 ggtgaaggtg tagttccgcg tcaccgagcc gatggtgacc gtcagcgtgt tgccgctgct
     9181 ggcgagccgg ctcgccgcgt cgctgctgct cagcgtcggc gcggtcgtcg cgctcgcgag
     9241 gccgaacccg gtggtgccgt tggcgaccgt caggttgtcg gcggtgtcgc ccgtcgcgat
     9301 ccggatcttg ccgttgacca gcgacgccga ggccgtcgga tcgctcgtct gcaggtccgt
     9361 gttgatggcc gacagcaccc cctgcaccgt gtcggtcccg gccacgttgt cggtgatgtc
     9421 gatggtgccg gtggtcatgt cggtgccgcc ggtattggtg aaatgatagg tgtgcgccgt
     9481 gctgccgatg gtcaccgtca gcgtgtcgcc attggtcgcg atcgtcgagg cggcggccga
     9541 gccggtcgcc gcggcgccgt cggcgaaggc ggtggtcttg cccgtgaagc tcgccatggt
     9601 ggccgagccg gtcgtcgccg ccgccgtatc ggtggggatc gtctcgaagt cggaggcctg
     9661 catcagctcg ctgcccgacg tctgcgaggt ctggtaggtg ccgtccttgg gcagttgcgg
     9721 caggttcagc tggtagttga tcgtgctggt cggctgcgcc ggcaggaacg agttcgacac
     9781 ccggatcacc tgcggcagcg agctcgagat gttccccgtc ttggtgtcga tcggcaggcc
     9841 ctggaggtaa tagccggagc cgttgaccag gtaaccatcc ttgttgacgt cgaaatcgcc
     9901 gcgcctggtg tagtagctgg tgccgccgaa caccggcgtg ccgtccgact cgcccagcgc
     9961 cggctgcacc acgaagaagc ccgagccgtt gaccgccatg taggtggcgt tggtgaccga
    10021 cttcacgtcg ccggcctccg tcgcggtcga ctgcgactgc gccagcaccg agcccgaagt
    10081 ctggatcttg gacggctggt cggggatcag gtcgaggaag ctcgtgtcga cgcgcttgaa
    10141 cccgatggtc tgcgagttcg cgatgttgcc cgagatgttg tcgagcgcga atgactgggc
    10201 gctgagcccg gtgaccgccg ttgaaagagc cccatagatt cccattgccg tcctcgtcca
    10261 atttggccgc aaagcgcgtg cctgtccgcg agacgcgatg caagcccgat gccagatacc
    10321 caagtcgctg atatcgctac ggaaacagca agtcgcccca cccgacgcgg cgccgcgctc
    10381 ggcaaagacc tccggccctg cggcagattc tgccttgtgc ttgtgccccc ggcgagcttg
    10441 ctctaaacgc tcgaaatcga tcgcaagggc ttccgccgcc atgcttttca agtcgccgga
    10501 cgagtttcac gacgcgccgc gccacgcggt gacggtgttc ggcatggccg gcgtcggcaa
    10561 gacccggctg gccgcgctgc tgcgcaagtc gcaatggttc cactactccg tcgactatcg
    10621 catcggcacc cgccacatgg gcgagttcat cgtcgacaac ttcaaggccg aggccatgaa
    10681 ggtgccgttc ctgcgcgagc tactgcgcac cgactcgatc aagatcggct ccaacatcac
    10741 ctttgccaat ctcgacccgc tctcgaccta tctcggccgg ccgggcaata ccgccaaggg
    10801 gggcctgccg atcgacgagt accgtcgccg ccagcagcag catggcgccg ccgagatcgc
    10861 cgccctgctc gaggtgccgc gcttcatcca gcgcgcccac gacctctatg gctatgacaa
    10921 tttcatcgcc gacaccggcg gttcgctgat cgaagtcgtc gacctcgaca atcccgccga
    10981 tccggtgatc cggacgatcg ccgacagcac cgcgctcatc tacatccgcg gcaccgacaa
    11041 ggacgccgag gagctgatcc gccgcttcgc ccactcgccc aagccgatgt actaccagcc
    11101 ggccttcctc acccgcaaat gggccgagta caagaagctg aacaagatcg ccgacgacgc
    11161 cagggtcgat cccgagaagt tcggtgcctg gggcttcgag gcgctgctgc acgaccgcct
    11221 gccgcgctac cggaagctgg cggaccgctt cggctacagt atcgaagccg ccgacctcga
    11281 gaccgtccgc gacggcgagg agttcatcga cctcgtcacc gccgcgatca cggaccgaat
    11341 gcgcaagccc ggctgagcct gcccatcccg tccctcaccg agttcgcctc atgcccattc
    11401 gcattcccga caatcttccg gcccgcaaga ccctcgagca cgagggcgtc gtcgtcatgg
    11461 attcgagccg cgccgcgcgc caggacatcc gcccgctgca gatcggcctg ctcaacctga
    11521 tgcccaacaa ggagcgcacc gagacccagt tctcgcgcct catcggcgcg tccccgctgc
    11581 aggtcgacct gacgctggtg cgcgttactg accacaagtc caagaacacc tccgaggact
    11641 acctcaagac cttctactcg acctgggaag acgtccgccg gcacaagttc gacggcttca
    11701 tcatcaccgg cgcgccggtc gccaacctgc cgttcgagga ggtccgctac tggtccgaga
    11761 tggtcgacat catggactgg acgcagacca acgtgcaccg ctccatgttc atctgctggg
    11821 gcgcccaggc ggcgctgcac catttccacc acgcccgccg ctaccgcatg gaccgcaagg
    11881 ccttcggtgt cttccgccac cacatcgtca acccgcgctc gccctggctg cgggggttct
    11941 ccgacagccc gatgatcccg gtcagccgct acaacgacat cgaccgccag agcctcggtg
    12001 cc
//
LOCUS       DATAZA010000340         3504 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1083490, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000340 DATAZA010000000
VERSION     DATAZA010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3504
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1083490"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..557)
                     /locus_tag="VHZ56_08675"
     CDS             complement(<1..557)
                     /locus_tag="VHZ56_08675"
                     /inference="COORDINATES: protein motif:HMM:NF018299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298085.1"
                     /translation="MTFYRLDGLDNVPNALRGAMVAIGSFDGVHRGHQAVLDRLKLQA
                     KARNVPAVMLTFEPHPRDVFAPAPFMFRLTPPDIKARLAAALGLDGIVLMPFSRDLSM
                     VQAEDFVSRFLVKALRVSGVVVGADFHFGHNRRGTPDFLRMAGSVHGFSVDILDLLPE
                     GAEAISSSRIRAALTDGDVALANGLL"
     gene            complement(603..1454)
                     /locus_tag="VHZ56_08680"
     CDS             complement(603..1454)
                     /locus_tag="VHZ56_08680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01459 family HAD-type hydrolase"
                     /protein_id="HEX4298086.1"
                     /translation="MALASLSALAPFYSAILSDVWGVVHNGVTPHPGAVDALRRFRAG
                     GGRVVLITNAPRAAAPIIDMLDDMGVPRDAYDGLVSSGDVTRGMIAPYRGRVIHHVGP
                     PLIDDSLYDGLGVIRGPADEAEAVVVTDLDTDDDTPEMYRDRIRLWRARRLPLICANP
                     DRVVEHAGRIIYCGGALADLYEAHGGRILMAGKPYRPIYEGALRLAEAAAGRSLARGK
                     ILAIGDSVRTDAIGAANAGLDLLFITGSIHAAELDAFGSPDPEAVRALVAPSGARLVG
                     AMARLAW"
     gene            complement(1458..2666)
                     /locus_tag="VHZ56_08685"
     CDS             complement(1458..2666)
                     /locus_tag="VHZ56_08685"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX4298087.1"
                     /translation="MQGLVYVFIALAALGVAGAAYFGLTFTPIEAAVTAIGFGCVAVL
                     LVERQLRRRAEARLEKAIEDLSRLLSTDAQAGAALSQRVNALSDAKPGPRLDSIESDL
                     AVLGAVVRQVTETVADLEEQRRFSRPDRRPAAPEPDPDNMPEPVIPLELLREAIDGHR
                     LVFHIEPIVTLPQRKPHGYDLVPRLLMEDDEFADRPDFMPRHGGEEVVARLESEAIDE
                     AVVIARRSRTSGAPITLFVPISRASLGSAKAVELILAGLDANRAILGALLFAVDQAEF
                     KALSAKERASLAAIGKMGVGLSLGGVTSLRIDYAELQGFGFKSLRVDATRFLRQPESF
                     TDFHVADIAAYGRRFGIELVATGIIDEQQLLNLFEDGITLAQGPHIAKPGPVRPDLQL
                     ERPSSVRAGA"
     gene            2797..3450
                     /locus_tag="VHZ56_08690"
     CDS             2797..3450
                     /locus_tag="VHZ56_08690"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="HEX4298088.1"
                     /translation="MPLQTANLSALGHSLLLIDREAAAVTALEANWAADGLPVLVPTS
                     CGRHAVELLRGGNFPIIVADIASILDLSPEPDEAMRRLVKAGADSLIIALSDACSVSA
                     SLAAMRAGAHDYLSKPIEAPALIARLAALAMRHGRVPAPATEAEQPAELEGGRSLAEP
                     MESSIVLPMWRQEQRIIEEAIRRFSGNIAAAAAALEVSPSTIYRKRQAWAAVEKGAA"
BASE COUNT          567 a         1179 c         1287 g          471 t
ORIGIN      
        1 agcagaccgt tggccagcgc cacgtcgccg tccgtcagcg ctgctcggat gcgtgacgac
       61 gagatcgcct cggcgccctc cggcaggagg tcgagaatat cgaccgaaaa gccgtggacg
      121 cttccggcca tgcgcaggaa atccggcgtg ccgcggcggt tatggccaaa atggaagtca
      181 gcccccacca cgacaccgga aacgcggagc gccttgacca ggaagcgcga cacgaagtcc
      241 tcggcctgca ccatgctgag gtcgcggctg aacggcatca gcacgatgcc gtcgagcccg
      301 agcgccgccg cgagccgcgc cttgatgtcg ggcggcgtca gccggaacat gaagggggcc
      361 ggcgcgaaca catcgcgcgg atgtggttcg aacgtcagca tgacggccgg cacgttgcgc
      421 gccttcgcct gcagcttcag ccggtccagc accgcctggt ggccgcgatg cacgccatcg
      481 aacgagccga tggccaccat cgcgccgcgc agcgcattgg gcacattgtc gaggccgtcg
      541 agccggtaaa aggtcaagtc agatcgatcc gcacgcgttg cgcgcttatc gcaacagccg
      601 cctcaccacg caaggcgggc catcgccccc accagccgcg ccccgctcgg tgccaccagc
      661 gcccgcaccg cctccggatc gggcgacccg aatgcatcga gctccgccgc gtgaatcgag
      721 ccggtgatga acagcaggtc gagcccggca ttggcggcgc cgattgcgtc cgtccgcacg
      781 ctgtcgccga tggcgaggat tttgccgcgc gccaggctcc ggcccgccgc cgcctcggcc
      841 agccgcagcg ccccctcata gatcgggcga tagggcttgc ccgccatcag gatgcggccg
      901 ccatgtgcct cgtagaggtc ggccagggcg ccgccgcaat agatgatgcg gccggcgtgc
      961 tcgacgacgc ggtcgggatt ggcgcagatc agcggcagcc ggcgcgcccg ccagagccgg
     1021 atgcggtcgc ggtacatttc gggcgtatcg tcgtcggtgt cgaggtcggt gaccaccacc
     1081 gcctcggcct cgtcggcggg cccgcggatg acgccgaggc cgtcgtagag cgaatcgtcg
     1141 atcagcggcg ggccgacatg gtggatgacg cggccgcgat agggcgcgat catgccgcgg
     1201 gtcacgtcgc cggacgacac cagcccgtca taggcgtcgc gcggcacgcc catgtcgtcg
     1261 agcatgtcga tgatgggagc cgcggcgcgc ggcgcgttgg tgatcagcac caccctgccc
     1321 ccgccggcgc ggaagcggcg cagcgcgtcg acggcgcccg gatgcggcgt cacgccattg
     1381 tgcacgacgc cccagacgtc ggacagaatg gcgctataga agggggccag cgccgaaagc
     1441 gatgcgagag ccacggatca ggcgccggcg cgcacgctcg aggggcgctc gagctgcagg
     1501 tcgggacgga ccgggccggg cttggcgatg tgcgggccct gcgccagggt gatgccgtcc
     1561 tcgaacaggt tcagcagctg ctgctcgtcg atgatgccgg tcgccaccag ctcgatgccg
     1621 aagcggcggc cgtaggcggc gatgtcggcg acgtggaaat cggtgaagct ttcgggctgc
     1681 cgcaggaagc gggtggcatc gacgcgcagc gacttgaagc cgaacccctg cagctcggcg
     1741 tagtcgatac gcagcgaggt gacgccgcca agcgacaggc cgacgcccat cttgccgatg
     1801 gcggcgagcg aggcgcgctc cttggccgag agcgccttga actcggcctg gtcgacggca
     1861 aacagcagcg cgccgaggat cgcacggttg gcgtcgaggc cggcgaggat cagctcgacc
     1921 gccttggcgc tgccgagcga ggcgcgcgag atcggcacga acagcgtgat cggcgcgccg
     1981 gaggtgcgcg agcgccgggc gatcaccacg gcctcgtcga tggcttccga ttcgagccgg
     2041 gccacgacct cctcgccgcc atgccggggc atgaaatcgg ggcggtcggc gaactcgtcg
     2101 tcctccatca gcaggcgggg aacgaggtcg tagccgtgcg gcttgcgctg cggcagggtg
     2161 acgatcggct cgatgtggaa gaccagccgg tggccgtcga tggcttcgcg caacagctcg
     2221 agcggaatga ccggctccgg catgttgtcg ggatctggtt cgggcgccgc cggcctgcgg
     2281 tcgggccggc tgaagcggcg ctgttcctcg agatcggcga cggtctcggt aacctggcgg
     2341 acgacggcac cgaggacggc gagatcggat tcgatcgaat cgagccgcgg accgggcttg
     2401 gcgtcgctca gggcgttgac ccgctggctc agcgcggcgc cggcctgggc gtcggtcgag
     2461 agcaggcgcg acaaatcctc gatggctttt tccagccggg cctcggcgcg gcggcgcagt
     2521 tgccgctcga ccagcagcac ggcgacgcaa ccgaagccga tggcggtgac ggcggcctcg
     2581 atgggggtga aggtcaggcc gaaataggcc gcgccggcaa cgcccagggc agcgagcgcg
     2641 atgaacacat agaccaggcc ctgcacgctt ccccgctccc cgagattcgg cgccccgcgg
     2701 ggcacaatag ggcggcaggc ggacgcgtca aaacggatta tttaccctga ggcccaacaa
     2761 tcgcgcctcg ccgtggtgca aatgccggac gcgtcgatgc cgcttcagac tgccaatctc
     2821 agcgccctgg ggcacagcct gctgctgatc gaccgcgagg cggcggcggt gacggcgctg
     2881 gaggccaact gggcggcgga cggcctgccg gtgctggtgc cgacgagttg cgggcgccac
     2941 gccgtcgagc tgctgcgcgg cggcaatttc ccgatcatcg tcgccgacat cgccagcatc
     3001 ctcgatcttt ccccggagcc cgacgaggcg atgcggcggc tggtcaaggc gggcgccgat
     3061 tcgctgatca tcgcgctctc tgatgcgtgc tcggtttcgg cgagcctcgc cgccatgcgg
     3121 gcgggcgcgc acgattacct cagcaagccg atcgaagcgc cggcgctgat cgcgcgcctc
     3181 gcggcgctgg cgatgcggca cgggcgcgtg ccggcgccgg cgacggaggc ggagcagccg
     3241 gccgaactgg agggcggccg cagcctggcc gagccgatgg agtcgagcat cgtgctgccg
     3301 atgtggcggc aggagcagcg gatcatcgag gaagcgatcc ggcgcttttc gggcaacatc
     3361 gccgcggcgg cggcggcgct cgaggtcagc ccgtcgacga tctaccgcaa gcggcaggcc
     3421 tgggcggcgg tcgaaaaagg cgcggcgtag gcccggctag cgccaggtga agacgcgcgt
     3481 caccgagtag ttgaagacca cgct
//
LOCUS       DATAZA010000341         3502 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_619167, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000341 DATAZA010000000
VERSION     DATAZA010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3502
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_619167"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..478
                     /locus_tag="VHZ56_08695"
     CDS             <1..478
                     /locus_tag="VHZ56_08695"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEX4298089.1"
                     /translation="TDAALADAVAREVDRQIALLPRADITRDGWREFGAIILVASLAE
                     AVELANRIASEHVELMLDDPLALQPKIRNAGAIFLGHHTPEAIGDYVGGSNHVLPTAR
                     SARYASGLGVLDFMKRTSLLGCDPGSLAALAPAAVTLAETEGLAAHGRSVSIRLNR"
     gene            478..1443
                     /locus_tag="VHZ56_08700"
     CDS             478..1443
                     /locus_tag="VHZ56_08700"
                     /inference="COORDINATES: protein motif:HMM:NF002769.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0262 family protein"
                     /protein_id="HEX4298090.1"
                     /translation="MALTPHVFDEKTDRIVAVTLDPNTITSIDPDEVHEWRIAIYDLV
                     ETNRFHPARVKSTGPYALHVSIVANYIVLDVRNPETYEPIAAHYLSLTPFRRLIRDYF
                     RIRDSYYGAIKTASTYQIETVDMARRGLHNEAAELLRTRLDNKLEMDLNTARRLFTLV
                     CAVQPYASRIDERESNLPTVLFVCSMNSVRSPIAAALARKYYPGRLIARSAGVRSGKA
                     DAFVHEVMEEIGVDMSVHTPHTMDELVANRFDLVVTMSADAPEAVARRGLEMGAIEHW
                     PMPDPTAVEGNREVILSAYRTLRDTLQKRVRERLEPLVATRSQTA"
     gene            1462..2100
                     /locus_tag="VHZ56_08705"
     CDS             1462..2100
                     /locus_tag="VHZ56_08705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008593768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf-like protein"
                     /protein_id="HEX4298091.1"
                     /translation="MATRPELILASASPRRLALLNQIGIEPEHLVPAHIDETPERNEL
                     PRKLAQRLADQKAIAAQHKARAAGIAGNALVLAADTVVAVGRRVLPKAETMEEANTCL
                     RLLSGRNHRVFTGVCMLTPSGATRRRLVESRLRFKRLSNREIESYLASAEWRDKAGGY
                     AIQGIAGAFVVKLVGSYSAVVGLPLNETVGLLSGEGYPVHFNWLNQSTLTAV"
     gene            2100..2315
                     /gene="yacG"
                     /locus_tag="VHZ56_08710"
     CDS             2100..2315
                     /gene="yacG"
                     /locus_tag="VHZ56_08710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HEX4298092.1"
                     /translation="MPATGPQKPARKCPICGKPSAGEFSPFCSARCQDVDLNRWLSNR
                     YVIPSDEPAAAEDGNGPPPDDAGDDAG"
     gene            complement(2312..3097)
                     /locus_tag="VHZ56_08715"
     CDS             complement(2312..3097)
                     /locus_tag="VHZ56_08715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012763320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX4298093.1"
                     /translation="MREVQEAKAGNMMLEDLKGKRVLVTGSSTGIGAAVARQLVRLGA
                     KVVVHGNKNAEAARQIAGDIGAAGVVLGDVGESEAARRIVAEAVAHLGGLDILINNAG
                     AIHERVTNAGFDEAMYERVFDTNVRSILAVTQAAYPHLKAAGGGSIINTGSIAGRFGG
                     FLGSTVYAAAKAAVHSITRNAAREFAEDHIRVNVVAPGFITTPFHDRTPQTVKDAAAA
                     QIPMKRLGTAEDCVGAYIFLCSEAMSGYITGQIIDVNGGQLMV"
     gene            3198..3273
                     /locus_tag="VHZ56_08720"
     tRNA            3198..3273
                     /locus_tag="VHZ56_08720"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3231..3233,aa:Phe,seq:gaa)
BASE COUNT          561 a         1326 c         1057 g          558 t
ORIGIN      
        1 caccgacgcg gcgctggccg acgccgttgc ccgcgaagtc gaccgccaga tcgccctgct
       61 gccgcgcgcc gacatcaccc gcgacggctg gcgggagttc ggcgccatta tcctggtcgc
      121 gtccctcgcc gaagccgtcg agctcgccaa ccgcatcgcc tccgagcatg tcgagctgat
      181 gctcgacgac ccgctggcgc tgcagccgaa aatccgcaac gccggcgcga tctttctcgg
      241 ccatcacacg cccgaagcca tcggcgacta tgtcggcggc agcaaccacg tgctgcctac
      301 cgcccgctcg gcgcgctacg cctccggact cggcgtcctc gacttcatga agcgcacgtc
      361 gctgctcggc tgcgatcccg gatcgctggc cgcgctcgcc cccgcggccg tcactctcgc
      421 cgaaacggaa ggcctcgccg cccacggccg gtcggtttcg atccggctca atcgctgatg
      481 gcgctgacgc cgcacgtctt cgacgagaag accgaccgga tcgtcgccgt caccctcgac
      541 cccaacacca ttacctcgat cgatccggac gaggtgcacg agtggcgcat tgccatctac
      601 gacctggtgg agaccaacag gttccatccc gcgcgggtga aatcgaccgg cccctacgcg
      661 ctccacgtct cgatcgtcgc caactacatc gtgctcgacg tgcgcaaccc cgagacctat
      721 gagccgatcg ccgcccatta cctctcgctg accccgtttc gccgcctgat ccgcgattat
      781 ttccgcatcc gcgacagcta ctatggtgcc atcaagaccg cctcgaccta ccagatcgaa
      841 accgtcgaca tggcgcgccg cggcctccac aacgaggccg ccgagctgct gcgcacccgt
      901 ctcgacaaca agctcgagat ggacctcaac accgcgcgcc ggctgttcac cctggtctgt
      961 gcggtgcagc cctacgccag ccgcatcgac gagcgcgaga gcaatctgcc gaccgtgctg
     1021 ttcgtctgct cgatgaactc ggtgcgttcg cccatcgccg ccgcactcgc ccgcaaatac
     1081 tatcccggcc ggctgatcgc ccgctccgcc ggcgtgcgct cgggcaaggc cgatgccttc
     1141 gtgcacgagg tgatggagga gatcggcgtc gacatgtccg tccacacccc gcacaccatg
     1201 gacgagctcg tcgccaaccg cttcgacctc gtcgtcacca tgagcgccga cgcgcccgag
     1261 gcggtcgccc ggcgcggcct cgagatgggc gccatcgagc actggccgat gcctgacccc
     1321 accgccgtcg aagggaaccg cgaagtcatc ctcagcgcct accgtaccct gcgcgatacc
     1381 ttgcagaaac gcgtgcgcga gcggctggag ccgctggtcg ccacccgttc acaaaccgcc
     1441 tgacttggtc tagagcgagc catggccacc cgtccggaac tgatcctcgc ctctgcctcg
     1501 ccgcgccggc tggcgctgct caatcagatc ggcatcgagc ccgagcacct ggttccggcc
     1561 catatcgacg agacgccgga gcgaaacgag ctgccgcgca agctggcgca gcgcctcgcc
     1621 gaccagaagg ccatcgccgc ccagcacaag gcgcgcgccg ccggcatcgc cggcaatgcc
     1681 ctggtgctgg ccgccgacac cgtcgtcgcc gtcggccgcc gggtgctgcc caaggccgag
     1741 accatggaag aggccaacac ctgcctccgc ctgctgtcgg gccgcaacca tcgcgtcttc
     1801 accggcgtct gcatgctgac cccgtccggc gcgacgcgcc gccgcctggt cgaatcgcgg
     1861 ctgcgcttca agcgcctctc gaatcgcgag atcgaaagct acctcgccag cgccgagtgg
     1921 cgcgacaagg ccggcggcta cgccatccag ggcatcgccg gcgccttcgt cgtcaagctc
     1981 gtcggctcct actccgccgt cgtcggcctg ccgctcaacg agaccgtcgg gctgctgtcg
     2041 ggggaggggt atccggtgca cttcaactgg ctcaaccagt cgacgctgac ggcggtttga
     2101 tgccggcgac ggggccacag aagccggcgc gcaaatgccc gatctgcggc aagccatcgg
     2161 ccggggagtt ctctccgttc tgctccgccc gctgccagga tgtcgacctc aaccgctggc
     2221 tcagcaaccg ctacgtcatc ccctccgacg agccggccgc agccgaggac ggtaacggcc
     2281 cgccgccgga cgacgccggg gacgacgccg gctagaccat cagctggccg ccattgacgt
     2341 cgatgatctg cccggtgatg tagcccgaca tcgcctccga gcagaggaag atgtaggctc
     2401 cgacgcagtc ctcggccgtt cccagccgct tcatcggaat ctgcgccgcc gccgcatcct
     2461 tgacggtttg cggcgtgcga tcgtggaacg gcgttgtaat gaagcccggc gccaccacgt
     2521 tgacccggat atgatcctcg gcgaactcgc gcgccgcgtt gcgggtgatc gaatgcactg
     2581 ccgccttcgc cgccgcgtag actgtcgagc cgaggaatcc gccgaaccgc ccggcgatcg
     2641 agccggtatt gatgatcgag ccgccgccgg ccgccttgag gtgcggatag gccgcctgcg
     2701 tcaccgccag gatcgagcgc acattggtgt cgaacacccg ctcgtacatc gcctcgtcga
     2761 agccggcatt ggtcacccgt tcgtggatcg cgccggcatt gttgatgagg atgtcgagcc
     2821 cgccgaggtg cgccacggcc tcggccacga tccgccgcgc cgcctcgctc tcgccgacgt
     2881 cgcccagcac cacgccggcc gcgccgatgt cgccggcgat ctgtcgcgcc gcctcggcat
     2941 tcttgttgcc gtgcaccacg accttcgccc cgagccgcac caattgccgc gccacggccg
     3001 ccccgatacc ggtcgacgaa ccggtgacca gcacccgctt tcccttcaga tcttcgagca
     3061 tcatgttccc cgctttcgcc tcctgaacct cacgtatcgc cgcccggcgc gcaagccgtc
     3121 attgccgctt gcgcggccga aaccgacccc ctataaaccg cgagcctttc ggcagccgcc
     3181 agccgcggct gcccgctgcc cgggtagctc agttggtaga gcagcggatt gaaaatccgc
     3241 gtgtcggtgg ttcaattccg cccccgggca ccattctttc ccaagcagca caagcagttg
     3301 gcgaacgagc gattttcgcg cgaggcgcta aacttggtcc ggactttcgc gccataggag
     3361 cgggcgagcg gttcgccttg aagctgaggg ccccgcgaaa tgcaatcggc ggcttcggcg
     3421 ttctcgccga gttctgtgct ccccattggg gcggcctggg ggaggcgctc gggatcaaga
     3481 acggcgtacc gcctggaggc ct
//
LOCUS       DATAZA010000342         4306 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2360858, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000342 DATAZA010000000
VERSION     DATAZA010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4306
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2360858"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            4..1179
                     /gene="argC"
                     /locus_tag="VHZ56_08725"
     CDS             4..1179
                     /gene="argC"
                     /locus_tag="VHZ56_08725"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010915633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEX4298094.1"
                     /translation="MAGSARIANPGCWPQGAIATVRPLVEAGILPADHPLTVHGISGY
                     TGGGRTMIADYEAAGEAASEFMPYGLTFRHKHLPELQTYARLEKPPLFTPAVGNFAQG
                     MITMVPLQLWALPRVPTGRDLHAAIADHFATIRGGFVEVAPLLDAERTPELDPELYNG
                     TNRMRLHVFASDAKAQAARIAGSARIANPGCWPQGAIATVRPLVEAGLLPADHPVTVH
                     GISGYTGGGRTMIADYEAAGEDASEFMPYGLTFKHKHLPELQTYARLEKPPLFTPAVG
                     NFAQGMITMVPLQLWALPKVPTGRDLHAAIADHFATIRGGFVEVAPLLDAERTPELDP
                     ELYNGTNRMRLHVFASDAKAQAVLVAVYDNLGKGASGAAVQNLNLMLGVAEDTSLAA"
     gene            1251..1751
                     /locus_tag="VHZ56_08730"
     CDS             1251..1751
                     /locus_tag="VHZ56_08730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX4298095.1"
                     /translation="MDDDGSMARVLAYCDGFPLDRFAPGDVLIAEGPPSDRMFILAVG
                     EVEVMRGDTQVADTAIPGSIFGEISALLGGPHTATVRAVTATTAFRIEDARALLQSHR
                     ELSYHVSRILARRLTDATSYLADIKRQFADRADHLGMVDQVLDALVQRQRPAVSAGPS
                     VTDDRL"
     gene            complement(1732..2520)
                     /locus_tag="VHZ56_08735"
     CDS             complement(1732..2520)
                     /locus_tag="VHZ56_08735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX4298096.1"
                     /translation="MKILIVSDFHYALPQFDWLLEAAPAYGLVIIAGDLLDTNSLVDP
                     GTQIVVVLAYLKRLRAMTRVLVCSGNHDLDVTGADGERHAGWLSAVKRLGIAADGDTQ
                     LCDDLLVTISPWWDGPLAQQAIAAQFELAASRRDGPWLWVYHAPPPASPISWSGQRYF
                     GDAALAGWIAAYTPSFIVSGHVHEAPFARGGSWADRIGDTWLFNPGRQIGPVPTTIVI
                     DTEARQAAWFSQEGAESVRLDLPLSRPIEPLTTMPVWMAKAGHP"
     gene            complement(2569..3045)
                     /gene="ybaK"
                     /locus_tag="VHZ56_08740"
     CDS             complement(2569..3045)
                     /gene="ybaK"
                     /locus_tag="VHZ56_08740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HEX4298097.1"
                     /translation="MSHTTQGTLLLDRLGIGYALHPYGYDPEAPRAGLQAAEALGIEA
                     AQTFKTLMLEVDGKPVCAVIPADMEASLKKVAAVFSGKSAAMMKVPDAERVTGYKVGG
                     IGPFGQKRQVPTAFDETIGLWDSIYINAGQRGLLLSIAPADAVKAAEGKVADLTSP"
     gene            complement(3042..3473)
                     /locus_tag="VHZ56_08745"
     CDS             complement(3042..3473)
                     /locus_tag="VHZ56_08745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase family protein"
                     /protein_id="HEX4298098.1"
                     /translation="MALSGLDWSDQSAPSLDDFEVLARQAIAELPQPFRDMVGDVPCA
                     VTDFATDEVLADLGIESEFDLMGLFHGVGMPQRGGHVATGQLPNRIFLYRRPILDYWA
                     EHEETLGAVVTHVLIHEIGHHFGFSDDDMERMEEQAAKDGQ"
     gene            complement(3464..>4306)
                     /locus_tag="VHZ56_08750"
     CDS             complement(3464..>4306)
                     /locus_tag="VHZ56_08750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019170838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HEX4298099.1"
                     /translation="IIGEIGTAGGTGHVIEYAGEAIRALSMEGRMTICNMSIEGGARA
                     GLIAPDETTFAYVKGRPRAPKGKAWDMALDYWTTLNSDADAQYDKVVVLDAAKLPPIV
                     SWGSSPEDVVSVNGAVPNPDEIADENKRASKWRALDYMGLKPGTKITDIAIERVFLGS
                     CTNGRIEDLRAAAKVVAGKKVAAGVNAMVVPGSGLVKEQAEAEGLDVIFKDAGFEWRE
                     PGCSMCLAMNPDKLKPQERCASTSNRNFEGRQGFKGRTHLVSPTMAAAAAVAGHFVDI
                     REWH"
BASE COUNT          656 a         1518 c         1450 g          682 t
ORIGIN      
        1 cggatcgccg gcagcgcgcg catcgccaat cccggctgct ggccgcaggg cgccatcgcg
       61 accgtgcggc cgctggtcga ggcgggaatt cttccggcgg accatccgct caccgtgcac
      121 ggcatctccg gctacaccgg tggcggccgg accatgattg ccgactacga agccgcgggc
      181 gaggccgcca gcgagttcat gccgtacggg ctgaccttca ggcacaagca cctgccggag
      241 ctgcagactt acgcccggct ggaaaagccg ccgctgttca cgccggccgt cggcaatttc
      301 gcgcaaggca tgatcaccat ggtgccgctg cagctgtggg cgctgcccag ggtgccgacc
      361 ggccgcgacc tgcatgccgc gatcgccgac catttcgcca cgatccgcgg cggcttcgtc
      421 gaggtcgcgc cgctgctcga cgccgagcgc acccccgagc tcgaccccga gctctacaac
      481 ggcaccaacc gcatgcggct gcacgtcttc gccagcgacg ccaaggcgca ggcggcacgg
      541 atcgccggca gcgcgcgcat cgccaatccc ggctgctggc cgcagggcgc catcgcgacc
      601 gtgcggccgc tggtcgaggc ggggctgttg cccgccgacc atccggtgac ggtgcatggc
      661 atctccggct acaccggcgg cggccggacg atgatcgccg actacgaagc cgcgggcgag
      721 gacgccagcg agttcatgcc gtacgggctg accttcaagc acaagcacct gccggagctg
      781 cagacttacg cccggctgga aaagccgccg ctgttcaccc cggccgtcgg caatttcgcg
      841 caaggcatga tcaccatggt gccgctgcag ctgtgggcgc tgccgaaggt gccgaccggc
      901 cgcgacctgc atgccgccat cgccgaccat ttcgccacga tccgcggcgg cttcgtcgaa
      961 gtcgcgccgc tgctggacgc cgagcgcacc cccgaactcg accccgagct ctacaacggc
     1021 accaaccgca tgcggctgca cgtcttcgcc agcgacgcca aggcgcaggc ggtgctcgtc
     1081 gcggtctacg acaacctcgg caagggcgcg tcgggggcgg cggtgcagaa cctcaatctg
     1141 atgctcgggg tggccgagga caccagcctc gcggcctagg gcgcggcggt cattgccttc
     1201 cgttcacgcc gcggtgcaca ctcgccttgc aacagtctgc ggggtgcgcg gtggacgacg
     1261 acggatcgat ggcgcgggtg ctggcctatt gcgacgggtt tccgctcgac cgatttgctc
     1321 ccggcgacgt gctgatcgcg gagggaccgc cgtcggatcg catgttcatc ctggcggtgg
     1381 gggaggttga ggtcatgcgt ggcgacacgc aggtcgcgga caccgccatt cccggctcga
     1441 tcttcggcga aatctcggcg ctgctcggcg gaccgcacac cgcaacggtc cgcgcggtga
     1501 cggcgaccac ggcgttccgt atcgaggacg cgcgggccct gctgcagagc cacagggagc
     1561 tcagctatca cgtctcgagg atcctggcgc gccggctgac cgatgcgacg agctatctgg
     1621 ccgacatcaa gcggcaattc gccgaccgcg ccgaccatct gggcatggtc gatcaggtgc
     1681 tcgacgcgct ggtgcagcgg cagcggccgg cggtcagcgc cggtcccagc gtcacggatg
     1741 accggcttta gccatccaga cgggcatcgt cgtcaacggt tcgatcggtc ggctcagcgg
     1801 caggtcgagg cggacgcttt ccgccccctc ctgcgagaac cacgcggcct ggcgcgcctc
     1861 ggtgtcgatc acgatggtgg tcggcaccgg cccgatctgc cggccgggat tgaacagcca
     1921 cgtgtcgccg atgcggtcgg cccacgagcc gcctcgcgcg aatggcgcct catgcacatg
     1981 gcccgagacg atgaagctgg gcgtgtacgc ggcgatccag ccggcgagcg ccgcgtcgcc
     2041 gaaatagcgc tggcccgacc agctgatcgg cgaggccggc ggcggcgcgt gatagaccca
     2101 gagccagggg ccgtcgcgcc ggcttgccgc cagttcgaac tgggcggcga tcgcctgttg
     2161 tgccagcgga ccgtcccacc agggcgagat ggtcaccagc aaatcgtcgc acagctgcgt
     2221 gtcgccgtcg gccgcgatgc ccaggcgctt gacggcactg agccagccgg catggcgttc
     2281 gccatcggca ccggtgacat cgaggtcgtg gttgcccgaa cagaccagca cgcgggtcat
     2341 ggcgcgtagc cgcttgaggt aggcgaggac cacgacgatc tgcgtgcccg gatcgaccag
     2401 cgaattggtg tcgagcaggt cgccggcgat gatcaccagg ccataggccg gcgccgcctc
     2461 gagcagccag tcgaactgcg gcagcgcata gtggaaatcg gaaacgatca ggatcttcaa
     2521 gcgggcccct tcgctttcgg cacagcctac cccagcgacg cggcaaggtc acgggctcgt
     2581 gaggtccgcc accttgccct ccgcggcctt caccgcgtcg gccggcgcga tgctcagcag
     2641 caggccgcgc tggccggcat tgatgtagat gctgtcccac agcccgatgg tctcgtcgaa
     2701 cgccgtcggc acctgccgct tctggccgaa cgggccgatg ccgccgacct tgtagccggt
     2761 gacgcgttcg gcgtcgggga ccttcatcat cgccgccgac ttgcccgaaa ataccgccgc
     2821 gactttcttg aggctcgctt ccatgtcggc gggaatgacc gcgcagaccg gcttgccgtc
     2881 gacctcgagc atcagcgtct tgaaggtctg cgccgcctcg atgccgagcg cttccgcggc
     2941 ctgcagtccg gcccgcggcg cctccggatc gtagccatag ggatggagcg cgtagccgat
     3001 gccgagcctg tcgagcagca gcgtgccctg cgtcgtgtgg ctcactggcc gtccttcgcc
     3061 gcctgctctt ccatccgctc catgtcgtcg tcggaaaagc cgaaatggtg gccgatctcg
     3121 tggatcagca catgcgtgac gacggcgccc agcgtctcct cgtgctcggc ccagtagtcg
     3181 aggatcggcc ggcggtagag gaagatgcgg ttgggcagct gcccggtcgc cacatggccg
     3241 ccgcgctgcg gcatgccgac gccgtggaac aggcccatca ggtcgaactc ggactcgatg
     3301 ccgaggtcgg cgagcacctc gtcggtggca aaatccgtca ccgcgcaggg cacgtccccg
     3361 accatgtcgc ggaacggctg cggcaactcg gcgatggcct ggcgcgccaa cacctcgaaa
     3421 tcatcgaggc tcggcgcgct ttggtcgctc cagtcgaggc cgctcagtgc cactcgcgaa
     3481 tgtcgacgaa atggcccgcg accgcggccg ccgctgccat cgtcggcgac accagatggg
     3541 tgcggccctt gaagccttgc cggccctcga aattgcggtt gctggtcgag gcgcagcgct
     3601 cctgcggctt gagcttgtcg gggttcatcg caaggcacat cgagcagccc ggctcccgcc
     3661 actcgaagcc ggcgtccttg aagatcacgt cgaggccttc ggcttcggcc tgctccttga
     3721 ccaggcccga ccccggcacg accatggcgt tgacgcccgc cgcgaccttc ttgccggcca
     3781 ccaccttggc ggcggcgcgc agatcctcga tgcggccatt ggtgcacgag ccgaggaaca
     3841 cccgctcgat cgcgatgtcg gtgatcttcg tgcccggctt caggcccatg tagtcgagcg
     3901 cccgccattt gctggcgcgc ttgttctcgt cggcgatctc gtccgggttc ggcaccgcgc
     3961 cgttgaccga cacgacatcc tcgggcgacg agccccacga gacgatcggc ggcagtttgg
     4021 cggcgtcgag caccacgacc ttgtcgtact gcgcgtcggc gtcggaattg agcgtcgtcc
     4081 agtagtcgag cgccatgtcc cacgccttgc cttttggcgc gcgcgggcgg cccttgacgt
     4141 aggcgaacgt cgtttcatcc ggcgcaataa gtccggcccg cgcgccgccc tcgatcgaca
     4201 tgttgcagat ggtcatgcgg ccttccatcg acagcgcgcg gatggcttcg cccgcgtact
     4261 cgatgacgtg gccggtgccg ccggcggtgc cgatctcgcc gatgat
//
LOCUS       DATAZA010000343         2662 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2592052, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000343 DATAZA010000000
VERSION     DATAZA010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2662
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2592052"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..976)
                     /locus_tag="VHZ56_08755"
     CDS             complement(<1..976)
                     /locus_tag="VHZ56_08755"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HEX4298100.1"
                     /translation="MTEHRPADAAIDWAQRGFARDMLARIAFIRAFETKAWALTQTNP
                     PRVPGSMHFCAGQEAVPLGAVAALRDDDQIIATYRGHGWALASGLEPRAVMGEICQKA
                     VGINGGRAGSAYIMAPHTRFIGENSIVGAGTTAACGVALANLAKGNRSVVAVSIGDGA
                     MNQGSVHEALAFAAAKSLPVLFVVENNGWSELTATGDMFRIDRLARRGAGYGIAAATI
                     DGSDPLAVRDSIAIAAARARAGDGPALIECRVPRLWGHYHRDIEHYRSKADKQAAEAN
                     DPLTRLADRLVASEILSRGEAEAVIAEQAALVETLAEEVMASPDPRPET"
     gene            1113..2513
                     /gene="purB"
                     /locus_tag="VHZ56_08760"
     CDS             1113..2513
                     /gene="purB"
                     /locus_tag="VHZ56_08760"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEX4298101.1"
                     /translation="MSSHVIDSRFLRDLYGTEAMRRIWSDEQLLQRWLDYEAALARAE
                     AKVGLVPADAAAEITRKCRAELFDLDAIKTGIDRTVHPLVPVIWQLSALCEGEAGGYV
                     HWGATTQDVTDTALILQLRDAIAEIEATLGTLTHILAALARTYRETPMAGRTHGQQAL
                     PITFGFKVAIWLAECLRHSERLAACKPRLLVGEFGGAVGTLAGIADQGMAVSRALMAE
                     LDLGEPLIAWHSSRDHIAEFAAIAAAVTATTGKIAHEIINLQMNEVGEVEERWEAGKV
                     GSSTMPQKRNPMLCETILTLSRLTRQHASLALDAMLHDFERDWSSVQMEWEFVPELCI
                     MTHAALSTTNRVLAMLAVNPDRMLQNLRISGGQLLAERVMFALAEHTGRQKAHDIVHE
                     ISMGAINDRTPFGEALKRHPVVSAQLTAATIERLLDPTTYVGLSAQFVDRVLATLPKA
                     AGDGAWRNGVAPEASP"
BASE COUNT          413 a          955 c          902 g          392 t
ORIGIN      
        1 cagtttccgg ccgcggatcg ggcgacgcca tcacctcctc ggccagcgtt tcgaccagcg
       61 ccgcctgctc ggcgatcacc gcctcggcct cgccccggct caggatttcg gacgcgacga
      121 gccggtcggc gagtcgcgtc aacggatcgt tggcctcggc cgcctgcttg tccgccttgc
      181 tgcggtagtg ctcgatgtcg cggtggtagt ggccccacag gcgcggcacg cggcattcga
      241 tcagcgccgg gccgtcgccg gcccgcgccc gggcggcggc gatggcgatg ctgtcgcgta
      301 cggccagcgg gtcgctgccg tcgatggtgg cggcagcaat gccgtagccg gcgccacgcc
      361 gcgccagccg gtcgatgcgg aacatgtcac cggtggcggt gagttcggac caaccattgt
      421 tctcgaccac gaacagcacc ggcagcgatt tggcggcggc gaaggcgagg gcctcgtgca
      481 ccgagccctg gttcatcgcc ccgtcgccga tgctcaccgc gacgacgctg cggttgccct
      541 tggcgagatt ggccagcgcc acgccgcagg ccgcggtggt gccggcgccg acgatcgagt
      601 tctcgccgat gaagcgggtg tgcggcgcca tgatgtaggc agaccccgcc cggccgccat
      661 tgatgccgac cgccttctgg cagatctcgc ccatcaccgc gcgcggctcg agcccgctgg
      721 cgagcgccca gccatggccg cgataggtgg cgatgatctg gtcgtcgtcg cgcagcgccg
      781 cgacggcgcc gagcggcacc gcctcctggc cggcgcagaa atgcatcgag cccggaaccc
      841 gcggcggatt ggtctgggtc agcgcccagg ccttggtctc gaaggcgcgg atgaacgcga
      901 tgcgggccag catgtcgcgc gcaaagccgc gctgcgccca gtcgatggcg gcgtcggccg
      961 gccggtgctc agtcattttc gggactcccg gaagctcggc ggcactagag cgcatcgccg
     1021 agacagccgg tagattatga attataattt atcttgtaaa gccggtgagg gctcgttaag
     1081 gattgccgcc ggagggggag ttccacagtt ccatgtcgtc gcacgtcatc gactcgcgct
     1141 tcctgcggga cctttacggg accgaggcga tgcgccggat ctggagcgac gaacagctcc
     1201 tgcagcgctg gctcgactac gaggcggcgc tcgcccgggc cgaggccaag gtcggcctcg
     1261 tacccgccga cgcagccgcc gagatcaccc gcaaatgccg ggccgagctg ttcgacctcg
     1321 acgccatcaa gaccggcatc gacaggaccg tgcacccgct ggtgccggtg atctggcagc
     1381 tctcggccct ctgcgagggc gaggcgggcg gctacgtgca ctggggcgcc acgacccagg
     1441 acgtcaccga cacggcgctg atcctgcagt tgcgcgatgc catcgccgag atcgaggcca
     1501 cgctcggcac gctgacccat attctcgcgg cgctcgcccg gacctatcgc gaaacgccga
     1561 tggcgggacg cacccacggc cagcaggcgc tgcccatcac cttcggcttc aaggtcgcca
     1621 tctggctcgc cgaatgcctc cgccacagcg agcggctcgc cgcctgcaag ccgcggctgc
     1681 tggtcggcga gttcggcggc gccgtcggca cgcttgccgg catcgccgac cagggcatgg
     1741 ccgtcagccg ggcgctgatg gccgagctcg acctcggcga gccgttgatc gcctggcatt
     1801 cgagccgcga ccacatcgcc gaattcgccg ccatcgccgc cgccgtcacc gccaccaccg
     1861 gcaagatcgc gcacgagatc atcaacctgc agatgaacga ggtcggcgag gtcgaggagc
     1921 gctgggaagc gggcaaggtc ggcagcagca ccatgccgca aaagcgcaac ccgatgctgt
     1981 gcgagaccat cctgacgctg tcgcggctga cccgccagca cgcctcgctg gcgctcgacg
     2041 ccatgctgca cgatttcgag cgcgactggt cgagcgtgca gatggagtgg gagttcgtgc
     2101 ccgagctctg catcatgacc cacgccgcgt tgtcgaccac caaccgggtg ctggcgatgc
     2161 tcgccgtcaa tcccgaccgc atgctgcaga acctcaggat ctcgggcggc cagctgctcg
     2221 ccgagcgcgt gatgttcgcg ctggccgagc acaccggccg ccagaaggcg cacgacatcg
     2281 tccacgaaat ctcgatgggc gccatcaacg accggacgcc cttcggcgag gccctcaagc
     2341 gccatcccgt ggtctccgcc cagctcactg cagcgaccat cgagcggctg ctcgacccga
     2401 ccacctatgt gggcctgtcg gcgcagttcg tcgaccgggt cctcgccacc ctgccgaagg
     2461 cggccggcga cggcgcctgg cggaacggcg tggccccgga ggcatcgcca tgagcgtcac
     2521 gccgatgccc aggctgcgca agctcgagac ggtcggcgac caggtgctcg accacatccg
     2581 gcagtcgatc ctctcgggac ggctggtggc cggcacccgc atcgaccagc acgcgctggc
     2641 cgacgagctc ggcgtcagca tc
//
LOCUS       DATAZA010000344         1779 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2360871, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000344 DATAZA010000000
VERSION     DATAZA010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2360871"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            368..1081
                     /locus_tag="VHZ56_08765"
     CDS             368..1081
                     /locus_tag="VHZ56_08765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX4298102.1"
                     /translation="MPKIALVDDDRNILTSVSLTLEAEGYNVSTYTDGASGLEGLTSD
                     RPDLAILDIKMPRMDGMELLRRLRQKSDLPVIFLTSKDEEIDELFGLKMGADDFIKKP
                     FSQRLLVERVKSILRRSAPRDGTAPGATAEPQPGKVLIERGNLVMDEERHTCTWKGQR
                     VTLTVTEFLILQALALRPGVVKSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKATD
                     DDFEMIETLYGVGYRFKEQ"
     gene            1090..>1779
                     /locus_tag="VHZ56_08770"
     CDS             1090..>1779
                     /locus_tag="VHZ56_08770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009211077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stimulus-sensing domain-containing protein"
                     /protein_id="HEX4298103.1"
                     /translation="MAVTGQDLPGLGKAAEARRRSSAPSRLWGAIGHEAGRAVAAVQR
                     LLGVTVFGSLTRRIVVLNLVALLVLVGGILYLNQWRAGLIDARVQSLRVQGEIIAAAI
                     AASATVDSDVIQVDPQRLLQLKGGDAVSPFSYYDPNLEFPINPEQAAPLLRNLVTPTG
                     TRARIYDQSGFMILDSESIYGKGEVIRTGKPAAGANPPATDWWSMLMNWVPGDNFPPY
                     QEYGADEGTKYP"
BASE COUNT          314 a          588 c          600 g          277 t
ORIGIN      
        1 agctgcccct cgcctgccgc aagtgcggca gcgaccagcg ccgcccgatt gccgccgcga
       61 cggatcgaag caatgccgtc gagccggcgc agaagctccg cagtgtcgac catttgtccg
      121 cctatccgtt gtggctgccg atgcccgcaa tccctagtgc gggacgcggc atcggggaca
      181 gcgggcaatc ggtcgtaaga cggaagttcg aggccgggca cgaaagccgc ccaaggaacg
      241 gcaggctgtg ggcgtctagt atttagtggc ctggcgtctt actttgttcg caattgtggc
      301 aatctcgttc cgccaccttt gcgcgcccgg ccgagctgcc aacgctgacc tatggaaagg
      361 gaccagcatg cccaagatcg ccctggtgga cgatgatcgc aatattctca cctcggtgtc
      421 gctgacgctc gaggccgagg gttacaacgt ctccacctac accgatggcg cctccgggct
      481 cgagggactc acctcggacc ggccggacct cgccatcctc gacatcaaga tgccgcgcat
      541 ggacggcatg gagctgctgc gccggctgcg ccagaagtcc gacctgccgg tgatcttcct
      601 cacctccaag gacgaggaga tcgacgagtt gttcgggctc aagatgggcg ccgacgactt
      661 catcaagaag ccgttcagcc agcggctgct ggtcgagcgg gtgaaatcga tcctccgccg
      721 ctcggcgccg cgcgacggca ccgctcccgg cgcgacggcc gagccgcagc ccggcaaggt
      781 gctgatcgag cgcggcaacc tggtgatgga cgaggagcgg cacacctgca cctggaaggg
      841 gcagcgggtg acgctgacgg tcaccgaatt cctgatcctg caggcgctgg cgctccggcc
      901 cggcgtggtc aagtcgcgca acgccctgat ggacgcggcg tacgatgacc aggtctatgt
      961 cgacgaccgc accatcgaca gccacatcaa gcggctgcgc aagaagttca aagccaccga
     1021 cgacgatttc gagatgatcg aaacgctcta cggcgtcggc taccgcttca aggaacagta
     1081 aggcgcccga tggccgtcac cggacaggat ctgccggggc tgggcaaggc cgcagaggca
     1141 cggcgccgca gttcggcgcc gtcgcggctg tggggggcca tcgggcatga ggccggccgt
     1201 gcggtcgctg cggtgcagcg gctgctcggg gtcacggtgt tcggcagcct cacccgccgc
     1261 atcgtggtgc tcaacctcgt ggcgctgctg gtgctggtgg gcggcatcct ctacctcaac
     1321 cagtggcggg ccggactgat cgatgcgcgc gtgcagtcgc tgcgcgtgca gggcgagatc
     1381 atcgcggcgg ccatcgccgc ttcggcgacg gtcgacagcg acgtcatcca ggtcgacccg
     1441 cagcggctgc tgcagctgaa gggcggcgat gcggtgtcgc cgttcagcta ctacgatccg
     1501 aacctcgaat tcccgatcaa tcccgagcag gcggcgccgc tgctgcgcaa cctggtgacg
     1561 ccgaccggga cgcgggcgcg catctacgac cagtcggggt tcatgatcct cgacagcgaa
     1621 tcgatctacg gcaagggcga ggtgatccgc accggcaagc cggccgccgg cgccaacccg
     1681 ccggccaccg actggtggtc gatgctgatg aactgggtgc cgggcgacaa tttcccgccg
     1741 taccaggaat acggcgccga cgagggcacg aaatatccg
//
LOCUS       DATAZA010000345         3206 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1781015, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000345 DATAZA010000000
VERSION     DATAZA010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3206
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1781015"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1117
                     /locus_tag="VHZ56_08775"
     CDS             <1..1117
                     /locus_tag="VHZ56_08775"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0006534 - cysteine metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEX4298104.1"
                     /translation="PRAVLDKMDWAYEHAYANVHRGLHTLANRATEAYEDGRKAVARF
                     LNASRPEEVVFTKGSTEAINLVASSFAAPMIRAGDEIVVSILEHHSNIVPWHFLRERH
                     GAVLKFVDCRDDGSFDLDAFEAALSPKTKMVAVTHMSNVTGTVVPVAEVIARAHARGV
                     PVLIDGSQGAVHLKVDVQALGADFYVFTGHKLYGPTGIGVLYGRHGLLQAMRPYQGGG
                     EMIDTVTLDTVTYNEPPHRFEAGTPPIVQAIGLGAAIGYVDGLGRDAIADHEREIAAY
                     AAEKLRQINALRLIGDAPGKGGIFSFEIEGAHAHDVATILDRYGIAVRAGTHCAMPLL
                     KRFGVTSTCRASLALYSGKDDVDALVEGIEKARKFFT"
     gene            1114..1524
                     /locus_tag="VHZ56_08780"
     CDS             1114..1524
                     /locus_tag="VHZ56_08780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013532157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system Fe-S cluster assembly protein"
                     /protein_id="HEX4298105.1"
                     /translation="MSDEAVETKAETAPVEVTEGNRIVPSIAPSIPEDEVARITADLI
                     GVLKTVYDPEIPVDIYELGLIYKVDLDDDRRLTIDMTLTAPGCPVAGEMPGWVENAAL
                     SVEGIKDVTVNMVFDPPWDQSRMSEEAQVALNWW"
     gene            1561..1941
                     /locus_tag="VHZ56_08785"
     CDS             1561..1941
                     /locus_tag="VHZ56_08785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018687970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HEX4298106.1"
                     /translation="MPLPIMSLTDAAADRVREIIDDSGKPLIGVRVGVKNAGCAGMSY
                     TLDYVAEPVGGDDHVTDKGVDVYIEPKATLFLLGTVMDFEEDLLKSGFTFKNPNQTGE
                     CGCGESVTLKPADLKALAEARAHA"
     gene            2039..2278
                     /locus_tag="VHZ56_08790"
     CDS             2039..2278
                     /locus_tag="VHZ56_08790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298107.1"
                     /translation="MTTQIEAKDEITDDGIAEFLSLARSANIFFEIVNDRMTVAAVNP
                     NWEMWRPIRHLLDEIGQARIELYMRRSTAARHTVH"
     gene            complement(2283..>3206)
                     /locus_tag="VHZ56_08795"
     CDS             complement(2283..>3206)
                     /locus_tag="VHZ56_08795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008598397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HEX4298108.1"
                     /translation="NLGLVVVDEQHRFGVEQRLALSDKGRDADLLVMTATPIPRTLVL
                     THFGDMSVSLITGKPRDRQPIDTAVLPVGEYERVIDRLRHRLDDGAQAFWVTPLVEES
                     ETLEVISAEDRYAELAKVFGDRVALVHGRMSAAQKEEAMGRFQRGDAGILVATTVIEV
                     GVDVPNATIMIIEHAERFGLAQLHQLRGRVGRGAQRSACLMLYREPLSDTAQVRLETI
                     RGTQDGFEIAERDLELRGEGDLLGTRQSGMPGYHLAVADAHRHLLEYAHDDARALLAR
                     DPDLAGPEGEAARTLLYLFRKDLALPLLRAG"
BASE COUNT          557 a         1097 c         1046 g          506 t
ORIGIN      
        1 gccccgcgcc gtgctcgata agatggactg ggcctacgag cacgcctacg ccaacgtcca
       61 ccgcggcctg catacgctcg ccaaccgcgc gaccgaggcc tacgaggatg gccgcaaggc
      121 cgtggcgcgg ttcttgaatg cgagccggcc ggaagaggtc gtcttcacca aaggctcgac
      181 cgaggcgatc aacctcgtgg cgtcgtcctt cgccgcgccg atgatccgcg cgggcgacga
      241 gatcgtcgtt tccatcctcg agcaccactc caacatcgta ccctggcact tcctgcgaga
      301 acgtcatggc gcggtgctga aattcgtcga ttgccgcgat gacggcagct tcgatctcga
      361 cgcgttcgag gcagcactct cgccgaagac gaagatggtt gccgtcaccc acatgtcgaa
      421 cgtcaccggg accgtcgtgc cggtcgccga ggtgatcgcg cgcgcccacg cccggggcgt
      481 gccggtgctg atcgacggca gccagggggc ggtgcacctc aaggtcgacg tgcaggcgct
      541 gggcgccgat ttctacgtct ttacggggca caagctctac ggcccgaccg gcatcggtgt
      601 gctctacggc cggcacgggc tcctgcaggc gatgcgcccg taccagggcg gcggcgagat
      661 gatcgatacg gtgacgctcg acaccgtcac ctacaacgag ccgccgcacc gcttcgaggc
      721 cggcacgccg ccgatcgtgc aggccatcgg gctcggcgcg gccatcggct acgtcgacgg
      781 gctcggccgc gacgccatcg ccgaccatga gcgggagatc gccgcatacg cggccgagaa
      841 actgaggcag atcaacgcgc tgcggctgat cggcgacgcg ccgggcaagg gcggcatctt
      901 ctcgttcgag atcgagggcg cccacgccca cgacgtggcc accatcctcg atcgctacgg
      961 catcgccgtg cgcgccggca cgcactgcgc catgccgctg ctgaagcgct tcggcgtcac
     1021 ctctacctgc cgggcttcgc tcgccctata ttcgggcaag gatgacgtcg acgccctggt
     1081 cgaaggcatc gagaaagcac ggaaattctt cacatgagtg acgaggctgt tgaaaccaaa
     1141 gcggaaacgg cgccggtgga ggtcaccgaa ggcaaccgga tcgtgcccag catcgccccc
     1201 tcgattcccg aggacgaggt ggcgcgcatc acggccgacc tcatcggcgt gctcaagacc
     1261 gtctatgacc ccgagattcc ggtcgacatc tacgaactgg gcctcatcta caaggtcgac
     1321 ctcgacgacg accgccgcct caccatcgac atgacgctga cggcgcccgg ctgcccggtg
     1381 gccggcgaaa tgcccggctg ggtcgagaac gccgccctgt cggtcgaggg gatcaaggat
     1441 gtcaccgtca acatggtctt cgatccgccc tgggaccaga gtcgcatgtc cgaggaagcg
     1501 caggttgcgc tgaactggtg gtaagcctat tatatcggta atcgacgata gagtttgatc
     1561 atgccgctgc ccatcatgag cctcaccgat gccgccgccg accgcgtgcg cgagatcatc
     1621 gacgattcgg gcaagccgct catcggcgtc cgcgtcggcg tcaagaacgc gggctgcgcc
     1681 ggcatgtcgt acacgctcga ctatgtggcc gagccggtag gtggcgacga ccacgtcacc
     1741 gacaagggcg tcgacgttta catcgagccg aaggcgacgc tgttcctgct cggcacggtg
     1801 atggatttcg aggaggacct cctcaagtcc ggcttcacct tcaagaaccc gaaccagacg
     1861 ggcgagtgcg gctgcggcga aagcgtgacg ctgaagcccg ccgacctgaa ggcgctggcc
     1921 gaggcacggg cgcacgcctg aacggcggcg cataaacttt tcgacaacca cgtttcaaac
     1981 tcgacgggca cccggcgggc gggctgcgca ttgcccttgc agtcaacgcg aggttgccat
     2041 gaccacccaa attgaagcga aagacgagat cacggacgac ggcatcgccg agttcctgtc
     2101 gttggcgcgg tccgccaaca tcttcttcga aatcgtcaat gaccgcatga ccgtcgccgc
     2161 ggtcaacccg aactgggaga tgtggcgacc gatccgccac ctgctcgacg agatcgggca
     2221 ggcgcgcatc gaactctaca tgcgccgctc gaccgccgcc cgccataccg tgcattgagc
     2281 catcatcccg cccgcagcag cggcagcgcc agatccttcc tgaacaggta gagcagcgtt
     2341 cgcgcggctt cgccttccgg gccggcgaga tcggggtcgc gcgccagcag cgccctggcg
     2401 tcgtcgtggg cgtattcgag cagatggcgg tgcgcgtccg cgacggccag gtggtagccg
     2461 ggcatgcccg actggcgggt gccgagcagg tcgccttcgc cgcgcaattc gaggtcgcgc
     2521 tcggcgatct cgaagccgtc ctgcgtgccg cggatcgtct cgagccgaac ctgcgcggtg
     2581 tcgctcagcg gctcgcgata gagcatgagg cacgccgagc gctgcgcgcc gcgcccgacg
     2641 cggccgcgga gctggtgcag ctgcgccagg ccgaaacgtt cggcgtgctc gatgatcatg
     2701 atggtcgcgt tgggcacgtc gacgccgact tcgatcaccg tggtggcaac gaggatgccg
     2761 gcgtcgccgc gctggaaccg gcccatcgct tcctccttct gcgccgccga catgcggccg
     2821 tggacgaggg cgacgcgatc gccgaagact tttgcgagct cggcgtagcg atcctcggcg
     2881 gaaatcacct ccagcgtctc gctttcctcg accagcggcg tcacccagaa cgcctgcgcc
     2941 ccatcgtcga gccgatgccg cagccggtcg atcacccgct cgtattcgcc gaccggcagc
     3001 accgcggtgt cgatcggctg gcggtcgcgc ggcttgccgg tgatcaggct gaccgacatg
     3061 tcgccgaaat gcgtgagcac cagcgtccgc gggatcggcg tcgccgtcat caccaggagg
     3121 tccgcatcgc gtcccttgtc gctgagggcg agccgctgct cgacgccgaa ccggtgctgc
     3181 tcgtcgacca cgacgagccc gaggtt
//
LOCUS       DATAZA010000346         3702 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2245242, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000346 DATAZA010000000
VERSION     DATAZA010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3702
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2245242"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..620)
                     /locus_tag="VHZ56_08800"
     CDS             complement(<1..620)
                     /locus_tag="VHZ56_08800"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX4298109.1"
                     /translation="MKLFFFGMGYSSLATARAVHQSIDPDVPVAGTTRTEEGIERLAE
                     SPYRLHLFDGMAPGATLGADLARATHVVLSIPPNDSGDPALNLHRADLDRAPDLQWLC
                     YYSTVGVYGDFGGAWVDESAPTRPVNRRSRQRVEIEQAWRDYAAGRGVPLLVLRLAGI
                     YGPGRSAFDKLREGTARRIVKPEQVFNRIHVDDIGRITALAARQRLG"
     gene            complement(620..1777)
                     /gene="queG"
                     /locus_tag="VHZ56_08805"
     CDS             complement(620..1777)
                     /gene="queG"
                     /locus_tag="VHZ56_08805"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015314713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0052693 - epoxyqueuosine reductase
                     activity [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HEX4298110.1"
                     /translation="MPISTSEPAAAARATAVVAELRARAKALGFDAFGIAAADARPDL
                     RDKLAAALAAGWQDGMEWMAGTAARRSSPAALWDEVRSVVMVGINYGPDRDPMETLSR
                     RDRGTISVYARNRDYHELVRGRLKELAGLLARRTGAAVKVFVDTAPVMEKPLAEAAGL
                     GWQGKHTVLVSREFGSWLFLGAIFTAAELPADAPHPENCGSCSRCLDVCPTQAFPAPF
                     QLDARRCLAYLSVEHQGPIPRQFRVAMGNRIYGCDDCLAVCPWNKFAAASREAKLQAR
                     DELNAPALSELAGLDDSGFRKLFSGSPVKRIGVARFLRNVLIAIGNSGDEGLAPSAER
                     HLSHADPLVRGAAVWATRRLVAPDRAARLALDFLPAETDTAVRAEWVGELV"
     gene            complement(1758..2435)
                     /locus_tag="VHZ56_08810"
     CDS             complement(1758..2435)
                     /locus_tag="VHZ56_08810"
                     /inference="COORDINATES: protein motif:HMM:NF025850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX4298111.1"
                     /translation="MPRLLQHRLDPGSRLARLMFAEYGIAHELEDIKPWSRDPHLLEL
                     NPAATVPILIDDGEPPAVGVLAVIHAIEDRYSPSAVAGLFPPQGRERAEMWRLSEWVL
                     MKLNDEVTRYVIEEKIVKRDQRGATPDPGVLRVAKANLQEHLLYFNWLFASRQWMAGE
                     SLTLADFALAAHLSALDYLGDVAWDTSAETRGWYARIKSRPAFRTLLSDRVGAMPPHA
                     GYADLDF"
     gene            2539..3354
                     /locus_tag="VHZ56_08815"
     CDS             2539..3354
                     /locus_tag="VHZ56_08815"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013635345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEX4298112.1"
                     /translation="MSLDQGLFAPAILGILEGLTEFLPVSSTGHLLLAEHFMGLDNDQ
                     WNVFTVLIQLGAILAVVAVYFGRLLLILRDAIAGRRGALRFILGVVLACLPAVIVGVI
                     LHDFITHVLYASPLLICVMLIVGGIILLYVDQLKLTPKYTDIYTYPPLLCFYIGLFQM
                     LSLIPGVSRSGSTIVGSLLLGTDKRSAAEFSFFLAIPIMVGAFGFDAWKNRGALTSSG
                     DIAIAIGLATAFVVAFFVVRMALNFIARNGFAPFAYWRIFVGAIGLWGVLLFK"
BASE COUNT          555 a         1333 c         1188 g          626 t
ORIGIN      
        1 ccgagccgct gccgcgccgc cagcgccgtg atccgcccga tgtcgtcgac gtggatacgg
       61 ttgaacacct gctccggctt gacgatccgc cgcgccgtcc cctcgcgaag cttgtcgaac
      121 gccgaccgcc cgggcccgta gatgccggcg agccgcagca ccagcagcgg cacgccgcgc
      181 cctgccgcgt agtcgcgcca tgcctgctcg atctcgaccc gctgccggct gcgccggttg
      241 accgggcgcg tcggggcgct ctcgtccacc cacgccccgc cgaaatctcc gtacacgccg
      301 acggtcgagt agtagcacag ccattgcagg tccggcgccc ggtcgaggtc ggcgcggtgc
      361 aaattgagcg ccggatcgcc gctgtcattg ggcgggatcg acagcaccac atgcgtcgcc
      421 ctggcgaggt cggcgccgag cgtcgcgccg ggcgccatgc cgtcgaacag gtgcagccga
      481 tacggactct cggccagccg ctcgatcccc tcctcggtgc gggtcgtgcc cgcaaccggc
      541 acgtcgggat cgatgctctg gtggacggcc cgcgccgtcg ccagcgacga atagcccatg
      601 ccgaagaaga acagtttcat cagaccagct cgccgaccca ctctgcgcgg acggctgtgt
      661 cggtctcggc cggcagaaag tccagcgcca atcgcgctgc ccggtccggc gcgacgagcc
      721 gccgcgtcgc ccataccgcc gccccgcgca ccagcggatc ggcgtgcgac aaatgtcgtt
      781 cggcgctcgg tgccagcccc tcgtcgccgc tgttgccgat ggcgatcagc acgttgcgca
      841 ggaatcgcgc gacgccgatg cgcttgaccg gcgagccgct gaacagtttc cggaagccgc
      901 tgtcatcgag ccccgccagc tcgctcagcg ccggtgcgtt gagctcgtcg cgcgcctgca
      961 gtttcgcttc ccgcgacgcc gcggcgaact tgttccacgg gcacaccgcg aggcagtcgt
     1021 cgcagccgta gatgcggttg cccatcgcca cccggaactg ccgggggatc ggcccctggt
     1081 gctcgacgct gagataggcg aggcagcgcc gcgcatcgag ctggaacggc gctggaaagg
     1141 cctgcgtcgg acagacatcg aggcagcggc tgcagctgcc gcagttttcc ggatgcggcg
     1201 cgtcggccgg cagttccgct gcggtgaaga tcgcgccgag gaacagccat gagccgaatt
     1261 cacgtgaaac cagcaccgtg tgcttgccct gccagccgag cccggccgcc tcggccagcg
     1321 gcttttccat caccggcgcg gtgtcgacga ataccttgac cgccgctccc gtgcggcgcg
     1381 ccagcaaccc cgccagctcc ttgagccggc ccctgacgag ctcgtggtag tcgcggttgc
     1441 gcgcgtagac cgaaatcgtg ccgcggtcgc gccggctcag ggtctccatc ggatcgcggt
     1501 cgggcccgta attgatgccc accatcacca ccgagcgcac ctcgtcccac agcgccgccg
     1561 ggctcgatcg ccgcgccgcg gtgccggcca tccactccat gccgtcctgc cagccggcgg
     1621 cgagtgccgc cgcgagcttg tcccgcaaat ccggccgggc gtccgccgcg gcgatgccga
     1681 acgcatcgaa accgagcgcc ttggcccgcg cccgcagctc ggcgaccacg gcggtcgcac
     1741 gtgccgcagc cgctggttca gaagtcgaga tcggcatagc cggcgtgcgg cggcatggcg
     1801 cccacgcggt cgctcagcag ggtgcggaag gccggccgcg acttgatgcg ggcgtaccag
     1861 ccgcgcgtct cggcggaggt gtcccaggcc acgtcgccca gataatcgag cgcgctgagg
     1921 tgcgccgcca gcgcgaaatc ggcgagcgtc aggctttcgc cggccatcca ctggcggctg
     1981 gcgaacagcc agttgaagta gagcaaatgc tcctgcaggt tcgccttggc cacccgcagc
     2041 acgcccgggt ccggcgtggc accccgctgg tcgcgcttga cgatcttttc ctcgatgacg
     2101 tagcgcgtca cctcgtcgtt gagcttcatc agcacccatt cgctgagccg ccacatctcg
     2161 gcccgctcgc ggccctgcgg cgggaacagc ccggccacgg cgctcggcga atagcggtcc
     2221 tcgatggcgt ggatcaccgc cagcaccccc accgccggcg gctcgccgtc gtcgatcagg
     2281 atcggcaccg tcgccgccgg attgagctcc agcaggtgcg ggtcgcggct ccacggcttg
     2341 atgtcctcga gctcgtgggc gatgccgtat tcggcgaaca tcagccgagc gaggcgggag
     2401 ccgggatcga gccggtgctg caggagtctg ggcatgctgc ttcgcgcggg tctccggcgc
     2461 tgatggcgcc ggcggccaaa tcagcttaag cgagggccgg gcagttcgac ccggaccccg
     2521 cgatcactag gagatcagat gagcctcgat caaggtcttt ttgcgccagc gatcctgggc
     2581 atcctcgaag gcctgaccga gttcctgccg gtttcctcca ccggccacct gctgctggcc
     2641 gagcacttca tgggcctcga caacgaccag tggaacgtct tcaccgtcct catccagctc
     2701 ggcgccatcc tcgccgtcgt cgcggtctat ttcggccggc tgctgctgat cctgcgcgac
     2761 gccatcgccg gcaggcgcgg cgccctgcgc ttcatcctgg gggtggtgct ggcctgcctg
     2821 ccggcggtga tcgtcggcgt catcctgcac gacttcatca cccacgtgct ctacgccagc
     2881 ccgctgctga tctgcgtcat gctgatcgtc ggcggcatca tcctgcttta tgtcgaccag
     2941 ctgaagctga cgcccaaata caccgacatc tatacttacc ccccgctgct ctgcttctac
     3001 atcgggctgt tccagatgct ctcgctgatc cccggcgtgt cgcgctccgg ctcgaccatc
     3061 gtcggctcgc tcctgctggg caccgacaag cgctccgccg ccgagttcag cttctttctg
     3121 gccatcccga tcatggtcgg tgccttcggc ttcgacgcct ggaagaaccg cggcgcgctc
     3181 acctcgtcgg gcgatatcgc catcgccatc ggcctcgcca cggcgttcgt cgtcgcgttc
     3241 ttcgtcgtgc ggatggcgct caacttcatt gcccgcaatg gcttcgcgcc gtttgcttac
     3301 tggcggatct tcgtcggcgc gatcgggctt tggggcgtcc tgctgttcaa ataagcggca
     3361 aattccgggc atcttcggtg tttcggcgag gccccgcgcg tgccacaatc caccggctca
     3421 aagcctgaaa cgttgcctta ttgcaacaaa gatggggacc gggtggccaa atagcggcag
     3481 tggtatgact gtcgactcga cattctggcc agaacacgac agaaaacata gcattaacca
     3541 taaggtcgat tctgcgggtc gcagaaatgg gggcgttgac atgaagggca cactggtttg
     3601 ggcgctcgtt ccggcactgc tggcaagcac cgcggccttg gccgatgacg ccacgccgca
     3661 ctacggcctg agcatcacgg gaggcgtgac cgccttcaac ct
//
LOCUS       DATAZA010000347         6513 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1781270, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000347 DATAZA010000000
VERSION     DATAZA010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6513
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1781270"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            151..678
                     /locus_tag="VHZ56_08820"
     CDS             151..678
                     /locus_tag="VHZ56_08820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298113.1"
                     /translation="MADIARVIAIGGAIGALVAGSLVAPAFLPAVMASEPTALGSTAA
                     KLFPPPFDPKSLRKFDIVLDEQVSTDVKRTQTVSKIGYGEKSTVTIITTPSGTYSSDA
                     LGSPYVQYPGFDKAPGDVHRHWAYSTFTTPYGTGSWSSFSSGSFTYFDYHFTPAPRHG
                     AWRTGVASGQAVLNL"
     gene            complement(657..1049)
                     /locus_tag="VHZ56_08825"
                     /pseudo
     CDS             complement(657..1049)
                     /locus_tag="VHZ56_08825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009362798.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall hydrolase"
     gene            1921..2940
                     /locus_tag="VHZ56_08830"
     CDS             1921..2940
                     /locus_tag="VHZ56_08830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HEX4298114.1"
                     /translation="MKFIELNNDQRRELVNTRQRNQAYQTLEARLASFRGSMVWAESK
                     GTQYLARSSYDKAGIRRQRSLGAKSPATEHMKAEFDRGRAEAQESFKEIEASMERQAA
                     INRAIGLGRVPLTGARIIRAIDRAGILGAGIRVVGTNAIFAYEAAAGVAVDPGLTTTG
                     DLDFLMDTRAGVRFIVSDEVSDRSLMSLLKAVDKSFERSRQEFRAQNDQGYMVDLIKP
                     MRATPWSEKPHSIGKVDGDLTAAEIEGLVWLENAPPFEAVAIDEKGYPVKIVAPDPRV
                     WAAHKLWVSHRSDRDPVKKRRDEDQAHVVAAIITSHLPHLVFEANQLLMLPKEVFDAA
                     APSFR"
     gene            complement(2973..5219)
                     /locus_tag="VHZ56_08835"
     CDS             complement(2973..5219)
                     /locus_tag="VHZ56_08835"
                     /inference="COORDINATES: protein motif:HMM:NF014895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HEX4298115.1"
                     /translation="MSLALEMFAIAPATGAANMTASQRTMLAGKARWIRAVHDAGLPV
                     APTIVLSRSGWGALQAERRQQASRLRAHWVATLFRLVGPDGVPPLLTVRTATDAAASG
                     LMPARSGLPAPTSEADAVDPRRPLGRAIADAFDSYGADAADPIVVVQATARGEIVQFL
                     SRDALSGAIGPAPLAGGSLPLSPGAIRLCEVLDSAAGRHMCITAAIDGRDLAFLSARA
                     YQASAAAELEAATDRVARGTWSEQQAVASLSPDRLQAMLHPSLRAGHAAEPVAAGLGV
                     SPGAAHGGIVFTAEDAARWKARGRHCILVVNETGPADIDGMKAATGILTARGGMTSHA
                     GVIARITGKPCVAGVRSLSVDAADMSCRIGDRVLRGGDRITIDGGDGSVYLGALPLTE
                     PHIGGALGELLGWSDASRTIEVRTNAETVDAARVALSFGAEGIGLARSEHMFFSRERM
                     VALRRLILSEDEADRTAALTGLVDFQTGDYSAIFSTMAGRPVTVRLFDPPLHEFLPRT
                     DEDIDETAKSLGLELRALKLRLDRISEINPMLGHRGVRLAVTYPEILEMQVQALLAGM
                     RAAMDQGGEPVALEIMVPFVSTVHEVTWVRQRVMELVDAANLPPAARRRFAFGTMIEL
                     PRAALRAGDIARHVDFFSFGTNDLTQTTYGISRDDAPAFLAAYQRKGLYELDPFVTLD
                     QKGVGELIAMAIQRGRAANPALRIGICGEHAGDPASLAFFARLGVDYVSCAPYRVPVA
                     RLALAQSA"
     gene            5321..6283
                     /gene="ispH"
                     /locus_tag="VHZ56_08840"
                     /gene_synonym="lytB"
     CDS             5321..6283
                     /gene="ispH"
                     /locus_tag="VHZ56_08840"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA];
                     GO_process: GO:0050992 - dimethylallyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEX4298116.1"
                     /translation="MVDRPKLEITLCAPRGFCAGVDRAIQIVELALEKYGAPVYVRHA
                     IVHNKYVVEGLRRKGAVFVEELGEIPPGPAPVVFSAHGVPKAVPEDARARNMFFLDAT
                     CPLVSKVHIEANRHFSEGREIVLIGHAGHVEVIGTMGQLPEGAISLVQTVADAEAFVP
                     RDPDKLAYVTQTTLSVDDTSAIVEVLRRRFPAIALPHKEDICYATTNRQEAVKKVAPA
                     VDAMIVVGAPESSNSVRLVEVAQRAGCARAMLVERADRIEWAAFEGVRRLGITAGASA
                     PEALVDEVIEAFAQRFEIEVGAHGAGRETIVFNLPRELRSTPAA"
     gene            6280..>6513
                     /locus_tag="VHZ56_08845"
     CDS             6280..>6513
                     /locus_tag="VHZ56_08845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase H family protein"
                     /protein_id="HEX4298117.1"
                     /translation="MSERVVIHTDGACSGNPGPGGWGAVLQYGSTVKELKGGAPETTN
                     NRMELTAAIEALNALKRPVEVELHTDSVYVKDGL"
BASE COUNT         1134 a         1955 c         2430 g          994 t
ORIGIN      
        1 cacgaccgat tcgtcgatgc cgtcgacatg ctggcgaccg gcctccaccg aacatcgtga
       61 aattaaggta aacgggcgtt ccattttgac gcgcccggcg gccgcatggt tgatgcgagg
      121 ttaacgacac ttcgcacccg aggaagcacc atggccgaca tcgcccgcgt tatcgccatc
      181 ggcggcgcca ttggcgcgct ggtggccggg agcctcgtgg cgccggcctt cctgccagcg
      241 gtgatggcca gcgagccgac ggcgctgggc agcacggcgg caaaactgtt cccgccgccg
      301 ttcgacccga aatcgctcag gaagttcgac atcgtgctcg acgagcaggt gtcgaccgac
      361 gtcaagcgga cgcagacggt cagcaagatc ggctatggcg agaaatcgac ggtgaccatc
      421 atcacgacgc cgagcggcac ctactcgtcg gatgcgctgg gctcgcccta cgtgcagtat
      481 ccggggttcg acaaggcgcc cggggatgtc caccggcact gggcctattc gacgttcacg
      541 acgccctacg gaaccggcag ctggagcagc ttttcgagcg gctcgttcac gtatttcgac
      601 taccatttca cgccggcgcc gcgacatggc gcgtggcgca ccggcgttgc ctcgggtcag
      661 gccgtcttga acttgtagaa gatgtggtgg ccgatcttgg tcacccgctt cagcagcggc
      721 gcccagtccg gatagacgta gtcggcgtgg tagtgcgtgg cgttggcgac ctcgggcaaa
      781 tagaggttgc cgtcgatgac gccgcgggcg atctccatcg cctgccgcca ggaattcgga
      841 tcgtcgatgg tttcggggat gccgtcgcag gcgaaggaga actggcaggc gttgtgccat
      901 tgctggttct ggaagacgac gccgcagatg gtctttggat agatcgggta ggccagccgg
      961 ttcatcacca cctgcgccac cgcgacctgg ccgcgatagc tctcgccgcg agcctcgaaa
     1021 tagatcgcct gcgccatgca tttgaggtcg gcggcgccga ccagctctcc cgcactgttg
     1081 gtgaggaaat tcgggccggt cgccggggcg gtgtcgcggg cataggccag cgcggtcgga
     1141 acgctgagcg gggtcggcac gtcggacggc accgcggcat cgatggcacc cagcgccgcg
     1201 ctggcatcgg gatcgacgct cgccagttgc gccggcgacg gctcgaggcc ggcgggcacc
     1261 ggcgggccgc ccttggcggc gcgaagctcg gcgagctcga ggcggacggc ctggaactgg
     1321 gccgtcacgg tgacgacgtc aggcacggcg acggcgcggt cgaccttggc ggattcattg
     1381 gggcccgaga aactgcccga ggtgaacagc gcggcgaccg agccggtgat gatggtgtcg
     1441 ttgccctgtc gggtgagcgt tgcggcgacg accagcggag cggccgcgac aaccgtggcg
     1501 ggaggctcag gcaggtcggg gctctgggcc ccgagggtca gcagcggcca ggcaggcaac
     1561 gccagcgcca gcgagacgat cgcgccggca aggctgtggc gcggcgaggg ccaggctctg
     1621 tttggtccag gtaggcccat ctaacgcggt acaactcacg caaccaaaaa cacgcgccgg
     1681 catgttgctc aaatgccgac gatccggatc atgggggatt agggttatcg ggaggtaaag
     1741 ccggcggcag acgtgagcgg caagcgggtg gatggttaat ccgggcgcgg aggggtagat
     1801 ttggggcgag tttcaacatt atgtagcgtt tctgcatata attgttgaac ccactgtttt
     1861 cattatataa gttggatttc aacaccgaag acgagggcgg ccaggctgct gttgaacccc
     1921 atgaaattca tcgagttaaa taacgaccag cgacgcgaac tcgtaaacac gcgtcagaga
     1981 aaccaggcat accaaaccct ggaagccagg ctagccagct ttcgcgggtc catggtgtgg
     2041 gccgaaagca agggcacgca atatctggcc cgaagctctt acgacaaggc tggcattcgc
     2101 cggcagcgat ccctcggcgc aaagtcaccc gcgaccgaac atatgaaagc ggagttcgac
     2161 cgcggtcgcg cggaagcgca ggagagcttc aaggaaatag aggcgtcaat ggagcgccaa
     2221 gctgccatca accgagcaat cggactggga cgagtccccc tgaccggggc tcgcattatc
     2281 cgcgcaatag atcgcgcggg aatactcggt gccggcatcc gggtcgttgg aaccaacgcg
     2341 atcttcgcct acgaagctgc cgctggcgtg gctgtcgatc cggggctcac cacgacaggc
     2401 gacctggact tcctgatgga tacgagagcg ggtgtcaggt tcattgtttc agacgaggta
     2461 tctgatcgct ctctgatgtc tctcctgaag gcagtcgaca aatcgttcga gcgttcaagg
     2521 caagagttcc gcgcccaaaa cgatcaaggc tatatggtcg atctcatcaa accaatgcgg
     2581 gcaacgccgt ggagtgaaaa accgcattcc atcggaaaag tggatggcga cctcacggcg
     2641 gctgaaatcg agggattggt atggctcgaa aacgcgccgc cttttgaggc cgttgcgatc
     2701 gacgaaaaag gctacccggt gaagatcgtg gctcccgatc ctcgggtgtg ggcagcgcac
     2761 aagctttggg tctcacaccg gtcggaccgc gacccggtga agaaacgccg cgatgaagac
     2821 caggcgcatg tggtggccgc gatcatcacg agtcacctcc ctcacctggt gttcgaagcc
     2881 aaccagttgc tgatgctccc caaggaagtg ttcgacgcgg cagcaccctc gtttcgttga
     2941 gaagaaattc ggatgatgcg gttccggcgg cgtcaggcgg actgggcgag ggcgaggcgg
     3001 gcgacgggga cgcggtaggg ggcgcagctg acgtagtcga cgccgagcct ggcgaagaag
     3061 gcgagcgagg cggggtcgcc ggcgtgctcg ccgcagatgc cgatgcgcag cgccgggttg
     3121 gcggcgcggc cgcgctggat ggccatggcg atgagctcgc cgacgccctt ctggtcgagg
     3181 gtgacgaagg gatcgagctc atagaggccc ttgcgctgat aggcggcgag gaacgccggg
     3241 gcgtcgtcgc gggaaatgcc gtaggtggtc tgcgtcaaat cgttggtgcc aaacgagaag
     3301 aaatcgacgt gccgggcgat gtccccggcg cgcagcgcgg cgcggggcag ctcgatcatg
     3361 gtgccgaagg cgaagcgacg gcgggcggcg ggtggcaaat tagcggcatc gaccagctcc
     3421 atcacccgct ggcggaccca ggtgacctcg tgcacggtgg agacgaacgg caccatgatc
     3481 tcgagcgcca cgggctcgcc accctggtcc atggcggcgc gcatgccggc gagcagcgcc
     3541 tgcacctgca tctcgaggat ttcgggatag gtcacggcga gacgcacgcc gcgatggccg
     3601 agcatgggat tgatctcgga gatgcggtcg aggcggagct tcagcgcgcg cagctcgagg
     3661 ccgagggatt ttgcggtctc gtcgatgtcc tcgtcggtgc gcggcaggaa ttcgtgcagc
     3721 ggcggatcga acaggcggac ggtcaccggg cggccggcca tggtcgaaaa gatggcggag
     3781 tagtcgccgg tctggaaatc gacgaggccg gtgagcgcgg cggtgcggtc ggcctcgtcc
     3841 tcgctgagga tcaggcggcg cagcgccacc atgcgctcgc gggaaaagaa catgtgctcg
     3901 gagcgggcga ggccgatgcc ttcggcgccg aagctcagcg ccacgcgggc ggcgtcgacg
     3961 gtttcggcgt tggtgcgcac ctcgatggtg cgggaggcgt cggaccagcc gagcaattcg
     4021 cccagcgcgc cgccgatgtg cggctcggtg agcggcaggg cgccgagata gacgctgccg
     4081 tcgccgccat cgatggtgat gcggtcgccg ccgcgcagga cgcggtcgcc gatgcggcag
     4141 gacatgtcgg cggcatcgac gctgaggctg cgcacgccgg cgacgcaggg ttttccggtg
     4201 atgcgggcga tgacaccggc gtggctggtc atgccaccgc gggcggtgag gatgccggtg
     4261 gccgccttca tgccgtcgat gtcggcgggg ccggtctcgt tgaccacgag gatgcagtgg
     4321 cggcccctcg ccttccagcg cgccgcgtcc tcggcggtaa agacgatgcc gccatgggcg
     4381 gcgccgggcg agacgccaag gccggcggcg accggctcgg cagcgtggcc ggcgcgcagg
     4441 ctcgggtgca gcatcgcctg caggcggtcg ggactgaggg acgccaccgc ctgctgctcg
     4501 ctccaggtgc cgcgcgcgac gcgatcggtg gcggcctcga gctcggcggc ggcgctcgcc
     4561 tgataggcgc gggcggagag gaaggcgagg tcgcggccat cgatggcggc ggtgatgcac
     4621 atgtggcggc cggcggcgct gtcgagcacc tcgcacagcc ggatcgcccc gggcgacagc
     4681 ggcaggctgc caccggcgag cggagccggg ccgatggcgc ccgagagcgc gtcgcgggaa
     4741 aggaactgca cgatctcgcc gcgggcggtg gcctggacga cgacgatggg gtcggcggca
     4801 tcggcgccgt aggagtcgaa ggcgtcggcg atggcgcggc cgagcgggcg gcgcggatcg
     4861 acggcgtcgg cttcgctggt gggcgccggc aggccggagc gcgccggcat caggccggag
     4921 gcggccgcgt cggtggcggt gcggaccgtc agcagcggcg gcacgccgtc ggggccgacg
     4981 aggcgaaaaa gggtcgcgac ccagtgggcg cgcaggcggc tcgcctgctg gcggcgctcg
     5041 gcctgcaggg cgccccagcc ggagcggctg aggacgatgg tgggggccac cggcaggccg
     5101 gcgtcgtgga cggcccggat ccagcgggcc ttgccggcga gcatggtgcg ctgcgacgcc
     5161 gtcatgttcg cggcacccgt cgcgggcgcg atcgcaaaca tttcgagggc caggctcacc
     5221 acatatcctt ttgatcgggc tggagttgca ttgtgcccgc ggcccggttg caccgcaacg
     5281 ggccttgact tggccttatg gcgaaagcat gtgctggcgc atggtggaca ggcccaagct
     5341 cgaaatcacg ctgtgcgcgc cgcgcggctt ctgcgcggga gtggatcggg cgatccagat
     5401 cgtcgagctg gcgctcgaga agtacggggc gccggtgtat gtgcggcacg cgatcgtcca
     5461 caacaaatac gtggtcgagg gactgcggcg gaagggcgcc gtgttcgtcg aggaactcgg
     5521 cgagatcccg ccggggccgg cgccggtggt gttttcggca catggtgtac ccaaggcggt
     5581 gccggaggat gcgcgggcgc gcaacatgtt ctttctcgat gccacctgcc cgctggtgag
     5641 caaggtgcac atcgaggcca accggcattt ttccgaaggg cgcgagatcg tgctgatcgg
     5701 ccatgccggg catgtcgagg tgatcggcac gatggggcaa ttgccggagg gcgcgatcag
     5761 cctcgtgcag acggtggcgg acgcggaagc gttcgtgccg cgcgacccgg acaaactggc
     5821 ctatgtgacg cagacgacgc tcagcgtcga cgacacttcg gcgatcgtcg aggtgctgcg
     5881 gcgacgcttc ccggcgatcg cgttgccgca caaggaggac atctgctacg ccacgaccaa
     5941 ccgccaggag gcggtgaaga aggtggcgcc ggcggtggac gcgatgatcg tcgtgggagc
     6001 gccggaatcg agcaattcgg tgcggctggt ggaagtggcg caacgcgccg gatgcgccag
     6061 ggcgatgctg gtggagcgtg ccgaccgcat cgagtgggcg gcattcgagg gcgtgcggcg
     6121 gctcgggatc acggcgggcg cctcggcgcc ggaagccctg gtggacgagg tgatcgaggc
     6181 cttcgcgcaa cgcttcgaga tcgaggtggg ggcgcacggg gcgggacgcg agacgatcgt
     6241 cttcaacctg ccgcgcgaac tgcgttccac accggcggca tgagcgagcg ggtcgtcatc
     6301 cacaccgacg gggcgtgctc cggcaatccc ggcccgggcg gctggggcgc ggtgctgcaa
     6361 tatgggtcca cggtcaagga gctgaagggc ggcgcgccgg agacgaccaa caaccggatg
     6421 gagctgacgg cggcgatcga ggcgctcaac gcgctgaagc ggccggtcga ggtcgagctc
     6481 cacaccgaca gcgtctacgt caaggacggg ctg
//
LOCUS       DATAZA010000348         2492 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3869643, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000348 DATAZA010000000
VERSION     DATAZA010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2492)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2492)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2492
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3869643"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..386)
                     /locus_tag="VHZ56_08850"
     CDS             complement(<1..386)
                     /locus_tag="VHZ56_08850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HEX4298118.1"
                     /translation="MARHLILVSAATQTCGVEEFARQTAVRLGSEGATYVLDRGLAGF
                     GAALRSADDVVINLPLLAWKRHPLLPILAAARARLAGRDVTLVLHEWADLALARRVTY
                     LPLLPLVTRLLFSSPEIMAQFAATPVS"
     gene            complement(389..1291)
                     /locus_tag="VHZ56_08855"
     CDS             complement(389..1291)
                     /locus_tag="VHZ56_08855"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX4298119.1"
                     /translation="MSPPPPRAVVVVPTFRRPAMLAETLASLAAQVTRVPFAVLVVEN
                     DAAREGQRVAETLGVAVVVAPRQGNVEAINTGFAAALERYPTAPYLLMIDDDETAAPE
                     WLDRIVAAADVSGAGIVGGPVTPRFDTEVGAAVRNHPVFWPIAAKSGPLPMIYGSGNC
                     LIRRDVFTTLGLPAFDPAFNFLGGGDTDFFTRARTARVSFYWAADAMAVECVPEARTR
                     PAWIFRRGLRIGAINRRIDRKARPQAVVLLKDLAVLALSLARFLGVLVRSQSLLQASH
                     PVVVALGRLLSIGGIETRQYQAGK"
     gene            complement(1288..2157)
                     /locus_tag="VHZ56_08860"
     CDS             complement(1288..2157)
                     /locus_tag="VHZ56_08860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007536193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6492 family protein"
                     /protein_id="HEX4298120.1"
                     /translation="MTTISLITPSLARDFEACRLLCETIDAYVDGFDRHYVVVSAEDL
                     PLFRPLAGPRREIVAEETLLPRSLRRLPLRWRKRTYRWAPGLRPIHGWHVQQLLKFAM
                     ATAQPNPRVMFIDSDNCFCRPFDLQDFAGGAVPLHVAHAEVAAGTPHALWIENAHRLL
                     GLPSPDFPADDFIGQMIVWDKAIVRTLLARIEAIAGESWWKAMCRRRQFSEYMIYGAA
                     VTADPILLQQHRLVEQSPCHSYWSGPPLDEGTMAQFLAGMRPGQSAIGIQSFTRTPIE
                     LIRAAALTPRVMA"
     gene            complement(2154..>2492)
                     /locus_tag="VHZ56_08865"
     CDS             complement(2154..>2492)
                     /locus_tag="VHZ56_08865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase"
                     /protein_id="HEX4298121.1"
                     /translation="GLTSPRAQRLLGARFRSSRGVHGGINRGRADPDYLGSVEIRGHS
                     QLEEMTAWVDDVVATPGWLIFFTHDVNDPPSEYGCPPDLLDGLAGYAVSAGCALLTVD
                     AALDRIGVAR"
BASE COUNT          446 a          852 c          846 g          348 t
ORIGIN      
        1 gagaccgggg tcgcggcaaa ctgcgccatg atttcgggcg aagaaaacag cagccgcgtc
       61 accagcggca gcaacggcag gtaggtgacc cggcgagcca gcgccaggtc cgcccactcg
      121 tgcagcacca gggtgacgtc acgacctgcc agccgggctc tcgcggctgc caggatcggc
      181 agcaatggat ggcgcttcca ggcgagtagc ggcaggttga tgaccacatc gtcggcggag
      241 cgcaacgccg cgccgaaacc ggcaagtccc cgatcgagga cgtaggttgc gccctcgctg
      301 ccgagccgga ccgccgtctg ccgggcgaat tcctcgacgc cgcaggtctg tgtcgcggcc
      361 gagaccagaa ttaggtgccg ggccatgctc acttccccgc ctgatactgg cgggtctcga
      421 tgccgccgat cgacagcagc cgtcccagcg cgacgacgac cggatgcgaa gcctggagaa
      481 ggctctgcga gcgcaccagc actcccagga atcgcgccaa cgacagcgcc agaaccgcga
      541 ggtccttcag cagcaccacc gcctgcgggc gcgccttccg gtcgatccgc cggttgatgg
      601 cgccgatccg caggccgcgg cggaaaatcc aggccgggcg agttcgcgcc tccggcacgc
      661 attcgaccgc catcgcgtcg gcggcccagt agaacgacac tcgcgcggtc cgggcgcggg
      721 tgaagaaatc ggtgtcgccg ccgccgagga aattgaaggc aggatcgaag gccggcagtc
      781 ccagcgtcgt gaacacatcg cgccggatca ggcagttacc gctgccatag atcatcggca
      841 gcggcccgga tttcgccgcg atcggccaga acacggggtg gttgcggacg gcggccccga
      901 cctcggtgtc gaaccgcggc gttaccggac cgccaacgat gccggcacca gacacatcgg
      961 cggcggcgac gatgcgatcg agccactcgg gcgccgcggt ttcatcgtcg tcgatcatca
     1021 acaggtatgg cgccgtcgga tagcgctcca atgctgcggc gaagccggta ttgatggctt
     1081 ccacattgcc ttgccgcggg gcgaccacca cggcgacgcc gagtgtttcg gcaacccgct
     1141 ggccctctcg cgcggcatcg ttctcgacca ccagcacggc aaacggcacg cgcgtcacct
     1201 gcgctgcgag cgaggccagc gtctccgcca gcatggctgg tcggcggaac gtcggcacga
     1261 ccaccacggc acgaggcggc ggcgggctca tgccatcacc cgaggcgtga gggccgctgc
     1321 gcggatcagt tcaatgggcg tacgggtgaa cgactggatg ccgatggcgc tctgccccgg
     1381 ccgcatcccg gcgaggaact gcgccatcgt gccttcgtcc agcggtggac cggaccagta
     1441 cgagtgacac gggctctgct cgaccaggcg gtgctgctgc aggaggatcg ggtcggcggt
     1501 gacggctgcg ccgtagatca tgtactccga gaactgccgc cggcggcaca tggctttcca
     1561 ccagctctcc ccggcgatgg cctcgatccg cgccagcagc gtccggacga tggccttatc
     1621 ccacacgatc atctgcccga tgaagtcatc ggcggggaag tctggtgacg gcaggcccag
     1681 cagccggtgg gcgttctcga tccagagcgc gtgcggcgtg cccgccgcga cctcggcgtg
     1741 cgcgacgtgc agcggcacgg caccaccggc aaaatcctgc aggtcgaacg gacggcagaa
     1801 gcaattgtcg gaatcgatga acatcacgcg cggattgggc tgtgccgtcg ccatcgcgaa
     1861 tttcagcaat tgctggacgt gccagccgtg gatcgggcgc aagccgggag cccagcgata
     1921 ggttcgcttg cgccagcgca aaggcaagcg acgcagtgag cgaggcagca gggtctcctc
     1981 ggcgacgatc tcgcgccgtg gccccgccag cggccggaac agcggcaggt cctcggcact
     2041 gaccaccaca tagtgacggt cgaacccatc gacgtaggcg tcgatcgtct cgcacagcag
     2101 tcggcaggcc tcgaaatcgc gtgccaggct cggcgtgatc agcgaaatcg tggtcatcgg
     2161 gccactccga tccgatcgag cgcggcgtcg accgtcagca gcgcgcagcc ggccgatacg
     2221 gcgtaaccgg cgagcccgtc gagcaggtcg ggggggcacc cgtattcgct cggcggatcg
     2281 ttgacgtcgt gggtaaagaa gatcagccaa ccgggcgtgg cgacgacgtc gtccacccag
     2341 gccgtcatct cctcgagctg cgagtggccg cgaatctcga ccgatcccag gtaatccgga
     2401 tcagctcgtc cacggttgat tcccccatgc acgccacggc tcgaccggaa ccgcgcgccg
     2461 agcaaccgct gcgcccgcgg ggacgtgagc cc
//
LOCUS       DATAZA010000349         3615 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1084811, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000349 DATAZA010000000
VERSION     DATAZA010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3615
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1084811"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..428)
                     /gene="dksA"
                     /locus_tag="VHZ56_08870"
     CDS             complement(6..428)
                     /gene="dksA"
                     /locus_tag="VHZ56_08870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019899 - enzyme binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HEX4298122.1"
                     /translation="MVRSAEVVAEYRPTQEETFMNPRQREYFRRKLENWREDILRESR
                     ETLENLQEESQNHPDMADRASSESDRALELRTRDRQRKLISKIDAALKRIEDGTYGYC
                     EETGDPITIARLDARPIATLSLEAQEVHERREKVYRDE"
     gene            complement(555..974)
                     /locus_tag="VHZ56_08875"
     CDS             complement(555..974)
                     /locus_tag="VHZ56_08875"
                     /inference="COORDINATES: protein motif:HMM:NF022227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliX"
                     /protein_id="HEX4298123.1"
                     /translation="MRIESSARATNVSGRAGISRPAGGSFFVSEPEAGETQVASAQPV
                     ANSAGIDALLALQAVDDPLFAKKKALRRGNALLDTLETIKADVLMGQVSEGRLNQLMA
                     LIGQARERNLPGLDAVLDDIELRARVELAKFGRYPGL"
     gene            1189..2322
                     /locus_tag="VHZ56_08880"
     CDS             1189..2322
                     /locus_tag="VHZ56_08880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008189959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HEX4298124.1"
                     /translation="MTHWALRQAAVAIFAAAVLFSPFAPIATAEAATARIKDIVNIEG
                     VRDNQLVGYGLVVGLNGTGDGLNNSPFTKQSLQAMLERLGVNTVGESMRTGNVAAVMV
                     TANLPPFATQGSRLDVNVASLGDASSLQGGTLLVTPLLGADGEVYAIAQGSVTINGFK
                     AQGDAATIISGVPTTGRIASGGLIEREIGFELGAQRTLRLALKNPDFTTSRRIALSIN
                     DFIGTPCATPEDPATVRINLPQNFNGNMVDLLTDVEQLVIETDQPAKIVIDENSGIIV
                     MGKDVRVSTVAVAQSNLTVTVAESPQVSQPPPLSNGDTTTVPRTQLGVNFVNSDLTVV
                     KESVSLQQLVDGLNALGISPRDLIAILQAIKASGALQADIEVL"
     gene            2322..2639
                     /locus_tag="VHZ56_08885"
     CDS             2322..2639
                     /locus_tag="VHZ56_08885"
                     /inference="COORDINATES: protein motif:HMM:NF021638.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod-binding protein"
                     /protein_id="HEX4298125.1"
                     /translation="MVDTVPLPKLDPKTPGYKQAMGQAKALEGEFLNTLTKEMFSSIK
                     TDDKNFGGGFGEQTWRDMQAEQFADAMADRGGIGLADQLMPTLLSLQEASRSTSSVTG
                     FHS"
     gene            2636..3100
                     /locus_tag="VHZ56_08890"
     CDS             2636..3100
                     /locus_tag="VHZ56_08890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298126.1"
                     /translation="MTAAQRLAALDELPARDLIAFTDGTLSALVEIMNRETTLLRAGR
                     YREAATLTADKTRLAQDYVTYSRAVQRQIERLKAEAPDDVGTLKHGHDRLATQMADNL
                     RVIATARAVTEDLLTDVARQVARAERPKTYGAGGALNTAQKPVGGIAINRSL"
BASE COUNT          600 a         1378 c         1055 g          582 t
ORIGIN      
        1 ggaccttact cgtcgcggta aaccttctcg cgccgctcgt gcacttcctg cgcttcgagg
       61 ctcagcgttg cgatcggccg cgcatcgagc cgcgcaatgg tgatcggatc gcccgtctcc
      121 tcgcaatagc cgtaggtgcc gtcctcgatc cgcttcagcg ccgcgtcgat cttcgagatc
      181 agcttgcgct gccggtcgcg ggtccgaagc tcaagcgccc ggtcgctctc cgacgacgcg
      241 cggtcggcca tgtccggatg gttctggctc tcttcctgca aattctcgag cgtctcgcgg
      301 ctctcgcgca ggatgtcctc gcgccagttc tccagcttgc gccggaaata ctcccgctgc
      361 cgcgggttca tgaaggtttc ctcttgggtc ggccggtatt ccgccaccac ctctgcgctg
      421 cgtaccataa ggactcaact cgcctgcccg aattggcgcc tgtatagttt ggcgcgcccg
      481 gccgggcaag cgcctctgcg cgccatgatc aattcgtgaa atccattgcc ggcctgaggg
      541 ttacacgccc gctcctaaag tcccggatag cgcccgaact tggcgagctc gacccgcgcc
      601 cgcagttcga tgtcgtcgag caccgcgtcg agccccggca ggttccgctc gcgcgcctgc
      661 ccgatcagcg ccatcagctg gttgagccgc ccctcgctga cctggcccat cagcacgtcg
      721 gccttgatcg tctcgagcgt atcgagcagc gcgttgccgc gtcgcagcgc cttctttttg
      781 gcgaacagcg gatcgtctac cgcctgcagt gccagcagcg catcgatgcc ggccgagttg
      841 gcgaccggct gcgccgacgc cacctgcgtc tccccggcct ccggctcgct gacgaaaaaa
      901 ctgccgcccg ccggccggct gatgccggcc cggccgctga cattcgtcgc tcgggcagag
      961 gattcgatgc gcaatcggcg actctcggcg ggcccgatgc cctgcccggc aaaatctgcc
     1021 gccatcggtt aacagggtct taacgaaccc ggcaatagct gctgccgccg ccccggaccc
     1081 tccccgttcc gcataggatt ccagggactt ggcgatctgg cacggtattc gcatcggtac
     1141 tcccgacgac gtggcccatg gggatgggtc gcaaccgggg aacgaacaat gacacactgg
     1201 gctctgaggc aggctgccgt ggcgatcttc gccgctgccg tcctcttctc acccttcgcg
     1261 ccgatcgcca ccgctgaagc agcgaccgcg cgcataaagg acatcgtcaa tatcgagggc
     1321 gtgcgcgaca accagcttgt cggctacggc ctcgtggtcg gcctcaacgg caccggcgac
     1381 ggcctcaaca attcgccctt caccaagcag agcctgcagg cgatgctcga gcggctcggc
     1441 gtcaacaccg tcggcgagag catgcgcacc ggcaacgtcg cggcggtgat ggtgaccgcc
     1501 aacctgccgc ccttcgccac ccagggctct cgtctcgacg tcaacgtcgc ctcgcttggc
     1561 gacgcctcga gcctgcaggg cggcaccctg ctggtcaccc cgctgctcgg cgccgacggc
     1621 gaagtctacg ccatcgccca gggttcggtg accatcaacg gcttcaaggc ccagggcgac
     1681 gccgcgacga tcatctcggg tgtccccacc accggccgca tcgcctcggg cggcctcatc
     1741 gagcgcgaga tcggcttcga gctcggcgcg cagcgcacgc tccgcctggc cctcaagaat
     1801 cccgacttca ccacctcgcg ccgcatcgcg ctgtcgatca acgacttcat cggcacgccc
     1861 tgcgccaccc ccgaggaccc cgccaccgtc cgcatcaacc tgccgcagaa cttcaacggc
     1921 aacatggtcg acctgctgac cgacgtcgag cagctggtga tcgagaccga ccagccggcc
     1981 aagatcgtca tcgacgaaaa ctccggcatc atcgtcatgg gcaaggacgt gcgcgtctcg
     2041 accgtcgccg tggcccagtc gaacctcacc gtcaccgtcg ccgaaagtcc gcaggtgtcg
     2101 cagccgccgc cgctcagcaa tggcgacacc accaccgttc cgcgcaccca gctcggcgtc
     2161 aacttcgtca actccgatct caccgtggtc aaggaatcgg tgagcctgca gcagctcgtc
     2221 gacggactca acgcgctggg catcagcccc cgcgacttga tcgccattct acaggcgatc
     2281 aaggcctccg gcgcgctgca ggccgacatc gaggtgctgt gatggtcgac accgtaccgc
     2341 tccccaagct cgaccccaag acccctggct acaagcaggc catgggacag gccaaggcgc
     2401 tcgagggcga gttcctcaac accctgacca aggaaatgtt ctcctcgatc aagaccgacg
     2461 acaagaattt cggcggcggc ttcggcgagc agacctggcg cgacatgcag gccgagcagt
     2521 tcgccgacgc catggccgac cgcggcggca tcggcctcgc cgaccagctg atgcccaccc
     2581 tgctcagcct gcaggaagcc tcgcgatcaa cctcaagtgt aacaggattc cactcgtgac
     2641 cgcagcccag cgcctcgccg ccctcgacga gcttcccgct cgcgacctca tcgccttcac
     2701 cgacggcacc ctcagtgccc tcgtcgagat catgaaccgc gagaccacgc tcctgcgcgc
     2761 cggccgctat cgcgaggccg ccaccctcac cgccgacaag acgcgcctgg cgcaggacta
     2821 cgtcacctac tcgcgcgccg tgcagcgcca gatcgagcgg ctcaaggccg aagctcccga
     2881 cgatgtgggc acgctcaagc acggccacga ccggctggcg acgcagatgg ccgacaacct
     2941 ccgggtcatc gccacggccc gtgccgtcac cgaggatctg ctgaccgacg tggcgcgcca
     3001 ggtcgcccgt gccgagcgcc ccaagaccta tggcgccggc ggtgccctca acaccgcgca
     3061 gaagccggtc ggcggcatcg ccatcaaccg ctcgctctga ctcggttgca tttgcgtaaa
     3121 aagcccccac cgctttccac cacgctgaga tgagcgccgc gtaagagccc gcgaggatcg
     3181 gatcgttccg acccactgga cgggtgatcg tggcgaccag gatcgcagcg caaccgatcg
     3241 gtagcgagct cggcatcgcc ggctttcgtt cgcggccgcc gcagctggag tcgcgttcta
     3301 ctgatgacgc tccggccccg accgacctgc ctccgccagc ctcccctctt cccgtgtccg
     3361 cactgccgcc gccactcgag tcgccggacg atacattcgc cgccgcgctc gccgccgagc
     3421 ggaccccgtc gccgccggcg ggtgccgatc agctgcgact gcgccgcagg ccagcctgga
     3481 ctgcccccga ctcgcccctc aggctcaccg accgctccgc ctgacgcacg tcgcgcaccg
     3541 ttaacgcggc gagcccggcg cacctcaccc ggcaggattt gccgacctgc acaaaccttt
     3601 gcgattacag tagct
//
LOCUS       DATAZA010000350         1712 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2129150, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000350 DATAZA010000000
VERSION     DATAZA010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1712
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2129150"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..675
                     /locus_tag="VHZ56_08895"
     CDS             <1..675
                     /locus_tag="VHZ56_08895"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEX4298127.1"
                     /translation="PSTARLLAAADIVISNGVDYDPWMDKLLSASTGTARTVIVAADL
                     VGKASGDNPHLWYDPPTLPAVAAALAAELAKRDPADAADYAANLQEFDGGFATAISGI
                     AAIKAKYAGTAVTATEPVFGYMAAAMGLTMLNVPFQFATMNETEPGPSEVAGFENSLR
                     DHTAKILFYNSQVTDDTTTRLLDLAKASGVPVIGVTETEPAGQTIETWFAGQIAAVRQ
                     SLASQP"
     gene            672..1490
                     /locus_tag="VHZ56_08900"
     CDS             672..1490
                     /locus_tag="VHZ56_08900"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4298128.1"
                     /translation="MSAIAFDSVTVALGGRRILADVSLAIEPGEFVGVLGPNGAGKTT
                     MFRAILGLLPLAAGRIAVLGQAPRRGNPAIGYVPQSRRAAAQLNIVGTEFLLSAHRGE
                     RWGLPFASAADRAAVDAALERVGATALARRPLSELSGGERQRLFVAQALVGHPKLLLL
                     DEPLISLDPAHQRAIVELVRDIARERNIAVLFSAHEVNPLLRAVDKVLYLGGGKAAIG
                     TVDDVVNEAVLSELYRTSVRVIRAEGRIFVIAEDGALDGHEHDHDHDHDHHEEA"
     gene            1494..>1712
                     /locus_tag="VHZ56_08905"
     CDS             1494..>1712
                     /locus_tag="VHZ56_08905"
                     /inference="COORDINATES: protein motif:HMM:NF013143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEX4298129.1"
                     /translation="MGGIFDYEFMRNAFAAATIVALVSGTIGYFLVLRGETFAGHALA
                     HVGFPGATGAVLIGVSPFLGLTLFTLLAG"
BASE COUNT          244 a          701 c          507 g          260 t
ORIGIN      
        1 ccgtccaccg cccgcctgct cgccgccgcc gatatcgtca tctccaacgg cgtcgactac
       61 gatccgtgga tggacaagct gctctcggct tcgaccggta cggcccgcac cgtcatcgtc
      121 gccgccgacc tggtcggcaa ggcgagcggc gacaatccgc atctctggta cgatccgccc
      181 accctgccgg ccgtcgccgc ggcgctcgcc gccgagctcg caaagcgcga tcccgccgat
      241 gccgccgact atgccgccaa cctgcaggaa ttcgacggtg gcttcgctac cgccatctcc
      301 ggcattgccg ccatcaaggc gaaatacgcc ggcaccgccg tcaccgccac cgagccggtg
      361 ttcggctaca tggcggcggc gatgggcctc accatgctca acgtgccgtt ccagttcgcc
      421 accatgaacg aaaccgagcc cggccccagc gaggtcgccg gcttcgagaa ttcgctgcgc
      481 gaccacaccg ccaaaatcct gttctataac agccaggtga ccgacgacac caccacccgc
      541 ctgctcgatc tcgccaaggc cagcggcgtg ccggtaatcg gcgtcaccga gaccgagccc
      601 gccggccaga ccatcgagac ctggttcgcc ggccagatcg ccgccgtccg gcaatcgctc
      661 gcgagccagc cttgagcgcc atcgccttcg acagcgtcac cgtcgcgctc ggcggtcgcc
      721 gcatcctcgc ggatgtgtcg ctcgccatcg agcccggcga attcgtcggc gtcctcggtc
      781 cgaacggcgc cggcaagacc accatgttcc gcgccatcct cggcctcttg ccgctggccg
      841 ccggccgcat cgccgtcctc gggcaggcgc cgcgccgcgg caacccggcc atcggctacg
      901 tgccgcagtc gcgccgcgcc gccgcccagc tcaatatcgt cggcaccgag ttcctgctca
      961 gcgcccaccg cggcgagcgc tggggcctgc cgttcgcctc cgccgccgat cgtgccgcgg
     1021 tcgacgccgc cctcgagcgc gtcggcgcca cggcgctcgc ccgccggccg ctgagcgagc
     1081 tgtcgggcgg cgagcgccag cgcctgttcg tcgcccaggc gctggtcggc caccccaaac
     1141 tcctgctgct cgacgagccg ctgatcagcc tcgatcccgc gcaccagcgg gccatcgtcg
     1201 agctcgtccg cgacatcgcc cgcgagcgca acatcgccgt gctgttctcg gcccacgagg
     1261 tcaatccgct gctgcgcgcc gtcgacaagg tcctctatct cggcggcggc aaggcggcca
     1321 tcggcaccgt cgacgacgtc gtcaacgaag ccgtgctgtc cgagctctac cgcacctccg
     1381 tgcgcgtcat ccgcgccgaa ggccgcatct tcgtcatcgc cgaggatggc gccctcgatg
     1441 gccacgagca cgaccacgac cacgatcacg accaccacga ggaggcctag gccgtgggcg
     1501 gcatcttcga ctacgagttc atgcgcaacg ccttcgccgc ggcgaccatc gtcgccctcg
     1561 tttcaggcac catcggctat ttcctcgtgc tgcgcggcga gaccttcgcc ggccatgcgc
     1621 tcgcccatgt cggcttcccc ggcgccaccg gcgccgtgct catcggcgtc tcgcccttcc
     1681 tcgggctcac cctgttcacc ctgctcgccg gc
//
LOCUS       DATAZA010000351         4460 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2246552, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000351 DATAZA010000000
VERSION     DATAZA010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4460
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2246552"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..308)
                     /locus_tag="VHZ56_08910"
     CDS             complement(<1..308)
                     /locus_tag="VHZ56_08910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013533607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX4298130.1"
                     /translation="MTVLVTGGAGYIGSHMALRLGDAGEATVVLDNLTTGVDWAIDPR
                     ATFVEGDAGDIDFVSNLIRDRGITEIVHFAGSISVPESVSDPLKYYRNNTSTSRNLLE
                     A"
     gene            394..1269
                     /gene="galU"
                     /locus_tag="VHZ56_08915"
     CDS             394..1269
                     /gene="galU"
                     /locus_tag="VHZ56_08915"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017486516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HEX4298131.1"
                     /translation="MSKRVRTAVFPVAGLGTRFLPATKAMPKEMLTVVDRPLIQYAVD
                     EAREAGIEHFVFVTGRNKSVIEDHFDKQYELEHTLATRGKSAALAELQRDLPQAGQVS
                     FTRQQEPLGLGHAVWCARELVGDQPFALLLPDMLFKGQPGVLKQMMEAYEETGGNIIA
                     VEEVPIDEVSSYGVVARGKGPDEGFAITGMVEKPKKKDAPSNLIISGRYILQPEIFTL
                     LADQPRGAGGEVQITDAMQTLMRQQGFTGVKYRGRSFDCGGKVGFLIANVVYALDRPD
                     IASAFLAELRKVDLG"
     gene            complement(1266..2468)
                     /locus_tag="VHZ56_08920"
     CDS             complement(1266..2468)
                     /locus_tag="VHZ56_08920"
                     /inference="COORDINATES: protein motif:HMM:NF021589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEX4298132.1"
                     /translation="MRRRRLIGIGWGPALAGLMGALLVGVAAARADDATATDDEAPAG
                     IDWSVALRGAYAVDNSGAHPEAIIAPDLSLRLPGGRGDTTLGAGGAATITPDGTSRIS
                     DLHSSVQSSYQLDEVSSLRGTLNLSVTQLDPDDPSLPLDTTSAPLTFMGTGEGDASRR
                     FGLFDVTGRLKGERFVEGPTTISGGSTIDNAPTNYWQGEVGLRTGYELGPLVSLFVDG
                     SEGYQKFDAPDPTLLKFLDARTTELRGGISYNDDGMLSAELSAGRAWIDYVDPAVTDV
                     PAWVADASVTFNPSETWSLDGSLETTLGPSTSIAGDTDAGYTLSGDARYRVNPWLTLR
                     SSASLDRVITLGTSTAATSYALGAGLDFASSRHAVWSADYSFAHDDDPPNPAENVQTI
                     TIGLKIRR"
     gene            2659..3438
                     /locus_tag="VHZ56_08925"
     CDS             2659..3438
                     /locus_tag="VHZ56_08925"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEX4298133.1"
                     /translation="MDIATIIGLFGGFGMLFGAILIEGSNPMSFLNVLATCVVVGGGT
                     MAVMGRYTLGGFLHGFTGGIKGVLFHKSVSTMKLIDQIAEIAETMRRQGPIALEQVEI
                     ADPFFKRGVRMIADGFSAEALRSSLERERDLDYERIHHGHVIFKAFGEAAPGMGMVGT
                     LIGLVSMFGHMDDPKKIGPGMAIALLTTLYGAVLANVVMLPISDKLANRAEEEGTNRS
                     LIIEALVMIREGRNPSTIKDELASYLPLHTRHKLLEEQEAA"
     gene            3439..4296
                     /locus_tag="VHZ56_08930"
     CDS             3439..4296
                     /locus_tag="VHZ56_08930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006932238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HEX4298134.1"
                     /translation="MAKKGHGGGGGHGGAWVISFADLMSLLMAFFVMLLSFSVQDQEK
                     LNMAAGSVQNAFGIQPYSDMTGMIERNGNPERDFLKDMTPSEMKASTEFATKDNPTHE
                     SQGQEANTWSKEKTDIERQAQYALAAASLKQAWQDQPDITAVADHIVVQQTEDGLDIE
                     ISDQDGRPMFPEGSKYPFEMTRKAIAAMAPSLAKLPNRIRVSGHTAAGGTYDNPQYGP
                     WELSFDRANVARQILEEFGISDDRVESVVGRADTDPFFPNDPYLSANQRISILLIYEK
                     PPVPVDLKP"
     gene            complement(4286..4453)
                     /locus_tag="VHZ56_08935"
     CDS             complement(4286..4453)
                     /locus_tag="VHZ56_08935"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HEX4298135.1"
                     /translation="MGHEAVIDEPIKDGFGRLALGDSIWRIAGPDLAAGQKVRVVGSD
                     GAVLRVEAVRA"
BASE COUNT          794 a         1563 c         1402 g          701 t
ORIGIN      
        1 gcttccagca ggttgcgcga ggtcgaggtg ttgtttcgat agtatttgag cggatcggaa
       61 accgactccg gcaccgaaat ggagccggcg aaatgcacga tttcggtaat cccgcgatcg
      121 cggatcagat tgctgacgaa atcgatgtcg ccggcgtcgc cctcgacgaa agtcgcccgc
      181 ggatcgatcg cccagtcgac gccagtggtc agattgtcga gcaccaccgt cgcttcgccg
      241 gcatcgccca gccgcagcgc catatggctg ccgatatatc ctgcgcctcc ggtaaccagc
      301 acggtcataa agcaatctcc agttaagcgc aggaatgcta agctcgactc gggggatagc
      361 acagaactcg cccctctcgg aggatctcca gccttgtcca aacgcgtccg cactgccgtg
      421 ttcccggtgg cgggactcgg cacccgtttt ctgccggcca ccaaggcgat gcccaaggaa
      481 atgctgaccg tggtcgaccg gccgctgatc cagtacgcgg tcgacgaggc gcgcgaggcc
      541 ggcatcgagc atttcgtctt cgtcaccggc cgcaacaagt cggtgatcga ggaccatttc
      601 gacaagcaat acgagctcga gcataccctc gcgacgcgcg gcaaatcggc ggctctcgcc
      661 gagctgcagc gcgacctgcc gcaggccggc caggtaagct tcacccgcca gcaggaaccg
      721 ctcggcctcg gccatgccgt ctggtgcgcc cgcgaactgg tcggcgacca gcccttcgcg
      781 ctgctgctgc ccgacatgct gttcaagggc cagccgggcg tcctcaagca gatgatggag
      841 gcctacgagg aaaccggcgg caacatcatc gccgtcgagg aagtgccgat cgacgaggtc
      901 tcctcctacg gcgtcgtcgc ccgcggcaaa gggccggacg agggtttcgc catcaccggc
      961 atggtggaaa agcccaagaa gaaggacgcc ccgtccaacc tcatcatctc cggacgctac
     1021 atcctgcagc ctgagatctt cacgctgctc gccgaccagc cgcgcggcgc cggcggcgag
     1081 gtgcagatca ccgacgccat gcagacgctg atgcgccagc agggtttcac cggggtcaag
     1141 taccggggcc gcagcttcga ttgcggcggc aaggtcgggt tcctcatcgc caacgtcgtc
     1201 tacgcgctcg accggcccga catcgccagc gccttcctcg ccgagctccg gaaggtcgac
     1261 ctcggctagc gcctgatctt gaggccgatg gtgatcgtct ggacgttctc cgccggattg
     1321 ggcggatcgt cgtcgtgggc aaagctgtag tcggccgacc acacggcatg ccgcgacgag
     1381 gcaaaatcga ggccggcgcc cagcgcgtag ctggtggcgg ccgtcgaggt gcccagcgtg
     1441 atcacgcgat cgaggctggc actgctgcgc agcgtcagcc acgggttgac ccggtagcgg
     1501 gcgtcgccgc tcagcgtgta gccggcatcg gtgtcgccgg cgatgctggt cgacggcccg
     1561 agcgtcgtct cgagcgagcc atcgagcgac cacgtctcgc tcggattgaa cgtcacgctc
     1621 gcatcggcga cccaggccgg cacgtcggtg accgccggat cgacatagtc gatccaggcg
     1681 cggcccgccg acagctcggc cgagagcatg ccgtcgtcat tgtagctgat gccgccgcgc
     1741 agttcggtgg tgcgcgcatc gaggaacttc agcagcgtcg gatcgggcgc gtcgaatttc
     1801 tggtagccct cggagccgtc gacgaacagc gacaccagcg ggccgagctc gtagccggtg
     1861 cgcaggccca cttcgccctg ccagtaattg gtcggcgcgt tgtcgatggt cgacccgccg
     1921 ctgatcgtcg tcggcccctc gacgaagcgt tcgcccttca gccgtccggt gacgtcgaac
     1981 aggccgaacc tgcgcgacgc atcgccctcg ccggtgccca tgaaggtgag cggcgcgctg
     2041 gtggtatcga gcggcaggct cggatcgtcg ggatcgagct gcgtgaccga caggttgagc
     2101 gttcccctca gcgagctcac ctcgtcgagc tggtagctcg actggacgct cgaatggagg
     2161 tcgctgatcc gcgacgtccc atccggcgtg atggtggcgg ctccgccggc gcccagcgtc
     2221 gtgtcgccgc gcccgcccgg cagccgcagc gacagatccg gagcaatgat ggcttcgggg
     2281 tgcgcgccgc tattgtcgac ggcataggca ccgcgcagcg ccacgctcca gtcgatgccg
     2341 gcgggggcct cgtcgtcggt cgccgtcgcg tcgtcggcac gcgccgcggc gacgccgacc
     2401 agcagcgcgc ccatgagccc ggccagcgcc ggaccccagc cgataccaat gagccgacga
     2461 cggcgcaaac aggcctcccc gcgccacagg cgggcgcccg gcaagccttg ccggtttatg
     2521 gttaacgaag ccttgctccg gcggccgcgg cgcggccttt cacgccccgt taaccatggc
     2581 atttaaagcc aatttatcca ttccccgctc aaactgccgg aggccgatgt cccggcctct
     2641 tgaccaggaa ttcggctcgt ggatatcgcc accatcatcg gccttttcgg cggcttcggc
     2701 atgctgttcg gggccatcct catcgagggc tccaacccga tgagtttcct caacgtgctc
     2761 gccacctgcg tggtggtcgg cggcggcacc atggcggtga tgggccgcta cacgctgggc
     2821 ggcttcctcc acggcttcac cggcggcatc aagggcgtgc tcttccacaa gagcgtctcc
     2881 accatgaagc tcatcgacca gatcgccgag atcgccgaaa ccatgcgccg ccagggcccg
     2941 atcgccctcg agcaggtcga gatcgccgac cccttcttca agcgcggcgt gcgcatgatc
     3001 gccgatggct tctcggccga agcgctgcgc tcctcgctcg agcgcgaacg cgacctcgac
     3061 tacgagcgca tccatcacgg ccacgtcatc ttcaaggcgt tcggcgaagc cgcgcccggc
     3121 atgggcatgg tcggcacgct gatcggcctg gtctcgatgt tcggccacat ggacgacccc
     3181 aagaagatcg ggcccggcat ggccatcgcg ctgctgacca cgctctacgg cgccgtgctc
     3241 gccaacgtcg tcatgctgcc catctcggac aagctcgcca accgcgccga agaggaaggc
     3301 accaaccgca gcctgatcat cgaggcgctg gtgatgatcc gcgagggcag gaatccgtcg
     3361 accatcaagg atgagctggc gagctacctg ccgctccaca cccggcacaa gctgctcgaa
     3421 gagcaggaag cggcgtaaat ggccaagaag ggccacggcg gcggcggcgg ccacggcggc
     3481 gcctgggtca tctcgttcgc cgacctgatg agcctgctga tggcgttctt cgtcatgctg
     3541 ctgagctttt cggtgcagga ccaggaaaag ctcaacatgg ccgccggctc ggtgcagaac
     3601 gccttcggca tccagcccta ttccgacatg accggcatga tcgagcgcaa cggcaacccc
     3661 gagcgcgact tcctcaagga catgacgccg tccgagatga aggcctcgac cgagttcgcg
     3721 accaaggaca acccgacgca cgaaagccag ggccaggaag ccaacacctg gtcgaaggaa
     3781 aagaccgaca tcgagcggca ggcgcagtac gcgctggccg ccgccagcct gaagcaggcc
     3841 tggcaggacc agcccgacat caccgccgtc gccgaccata tcgtcgtgca gcagaccgag
     3901 gacggcctcg acatcgaaat ctccgaccag gacggccggc cgatgttccc cgagggcagc
     3961 aaatatccct tcgagatgac ccgcaaggcg atcgccgcga tggccccctc gctcgccaag
     4021 ctgcccaacc gcatccgcgt ctcgggtcat accgccgccg gcggtaccta cgacaacccg
     4081 caatacggcc cgtgggagct gagcttcgac cgcgccaacg tcgcgcgcca gatcctcgag
     4141 gagttcggca tctccgacga ccgcgtcgaa tccgtagtcg ggcgagccga caccgatccg
     4201 ttctttccca acgatcccta cctgagcgcc aaccagcgca tctcgattct gctgatctac
     4261 gagaagccgc cggtgccggt cgacctcaag ccctgacggc ttccacccgc aacactgcac
     4321 cgtcgctgcc gaccacccgc accttctggc cggccgccag gtcgggaccg gcaatgcgcc
     4381 agatgctgtc gcccagcgcc agccggccga agccatcctt gatcggctcg tcgatcaccg
     4441 cctcgtggcc gatgaagcgc
//
LOCUS       DATAZA010000352         1612 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3059815, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000352 DATAZA010000000
VERSION     DATAZA010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3059815"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1189
                     /locus_tag="VHZ56_08940"
     CDS             <1..1189
                     /locus_tag="VHZ56_08940"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4298136.1"
                     /translation="LAAGSAAPALATELFDTCAQSAASAYEPGFADIGTSDVDMNVVA
                     NVDYQPVESCEAALAEDPSSTQIKAWLGNAYVVDGSISKGIPLLEAAAADNNVLALRT
                     LGDLTIIGKGVPRDEAHGVALLTAAADAGFALAALSLAYSYEFGDGVEADPAAAFKWY
                     MAAAKAGVPRAELAVAARYRAGNGVAQSDADAFRWIKAAADKGDGEGQYQLGVAYLEG
                     LSVKPSKPKALQAFKSAAEQNNQDGTDALGYMTELGIGLKADVAAAAQLYQQAQMNMP
                     QATYNYARLEESGSGVDQNAAEARTNYLAAANGGEMRAAVNLALMELSGTGGPIDVAD
                     AVRLTALAADAGNAVAENNLGRLYELGLGVTADPDRARELYGKAAAQGYAVAKANLAR
                     LGG"
     gene            complement(1192..>1612)
                     /locus_tag="VHZ56_08945"
     CDS             complement(1192..>1612)
                     /locus_tag="VHZ56_08945"
                     /inference="COORDINATES: protein motif:HMM:NF018684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HEX4298137.1"
                     /translation="LVPALQQCIEGVEASAKAGGDDSDVPNMADCISVGTNACQNESG
                     ASTPQGIVVCDREEQAFWEALLSFSYDSLRTSLPASAFRSLEAAQKAWLPWRAARCKF
                     VFDSSGSAADSPDYLSFCLMETTGERAIDLLDVMEGG"
BASE COUNT          271 a          521 c          599 g          221 t
ORIGIN      
        1 gctggcggcg ggctccgccg cgccggcgct ggcgaccgag ctgttcgata cctgcgcaca
       61 gtcggcagcg agcgcgtacg agccgggctt cgccgatatc ggcacgtccg acgtcgatat
      121 gaacgtcgtg gcgaacgtcg actaccagcc cgtcgagagc tgcgaggcgg cactcgccga
      181 ggatccgtcg tcgacgcaga tcaaggcctg gctgggcaac gcctatgtcg tcgacgggtc
      241 gatcagcaag ggcatcccgc tgctcgaggc ggccgcggcc gacaacaacg tgctggcgct
      301 gcggacgctg ggcgacctca ccatcatcgg caagggcgtg ccgcgcgacg aggcacacgg
      361 ggtggcgctg ctgacggccg ccgccgatgc cggctttgcg ctggcggcgc tcagccttgc
      421 ctattcctac gagttcggag acggcgtgga ggccgatccg gcagcagcgt tcaagtggta
      481 catggcggcg gcaaaagccg gcgtgccacg ggcggagctc gcggttgcgg cacgctatcg
      541 tgcggggaac ggcgtcgcgc agagcgatgc cgatgccttc aggtggatca aggcggcggc
      601 cgacaagggc gacggggagg gccagtacca gctcggggtc gcctatctcg aggggttgag
      661 cgtcaagccc agcaagccca aggcgctgca ggcgttcaag agcgcagcgg agcagaacaa
      721 ccaggacggc acggatgcgc tcggctacat gaccgagctc ggcatcgggc tcaaggcgga
      781 tgtcgccgcg gccgcgcagc tttaccagca ggcccagatg aacatgccgc aggccacgta
      841 caactacgcg cggctcgagg agagcggcag cggcgtcgac cagaatgccg cagaggcgcg
      901 cacgaactat ctcgcggcgg ccaatggcgg cgagatgcgc gcggcagtca acctggcgct
      961 gatggaactg agcggcaccg gcgggccgat cgacgtggcg gatgcggtgc ggctgaccgc
     1021 gctcgcggcc gacgccggca atgcggtggc ggagaacaat ctggggcggc tctacgagct
     1081 cgggctcggc gtcactgccg atccggacag ggcgcgggag ctttacggca aggccgcggc
     1141 acaggggtac gccgtcgcca aggccaattt ggcgcgcctc ggcggctgag ctcagccgcc
     1201 ctccatcaca tcgagcaggt cgatggcgcg ctcgccggtg gtttccatca ggcagaacga
     1261 caggtagtcg gggctgtcgg cggcgctgcc gctggagtcg aagacgaatt tgcagcgcgc
     1321 cgcgcgccac ggcagccacg ccttctgcgc cgcctccagc gagcggaagg cgctggccgg
     1381 gaggctggtc cgcaggctgt cgtaggagaa cgacagcagc gcctcccaga atgcctgttc
     1441 ctcgcggtcg cagacgacga tgccctgcgg cgtcgaggcg ccggattcat tctggcaggc
     1501 gttggtgccg accgagatgc agtcggccat gttgggcacg tcggaatcgt cgccaccggc
     1561 cttggcgctg gcctcgacac cctcgatgca ttgctgcagg gcgggcacca gc
//
LOCUS       DATAZA010000353         2848 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_157169, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000353 DATAZA010000000
VERSION     DATAZA010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2848
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157169"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..726
                     /locus_tag="VHZ56_08950"
     CDS             <1..726
                     /locus_tag="VHZ56_08950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01620 family protein"
                     /protein_id="HEX4298138.1"
                     /translation="VLGLFLLALVALIVRETASLWRLRTLDHLKAAAAIAIAADSLPQ
                     ARPILAELTAIYAPRPDLSRALARLEADRGQFFDGGELLKFGERTLMAPLDARARTLT
                     AAAARRVALVTTISPRALVDIAYVVWESIRLGGAIARLYGARPGLFGTWRLIGAILGH
                     LAVTGGLVLTDGVVEQLVGQGLAARLSQRLGEGVVNGLMTVRVGIAAMRVVRPLPFTT
                     EPAPLVKDFLPELANVLKSNATS"
     gene            861..1436
                     /locus_tag="VHZ56_08955"
     CDS             861..1436
                     /locus_tag="VHZ56_08955"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009211146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEX4298139.1"
                     /translation="MFRVAVMVGSTRSASSNLKLAQALEKLASGRLAFDYLDIGSLPF
                     YDETLWDNPPEAVVALKQRIAEADAVLFVTPEYNRSIPGALKNAIDWPSRPFGQGVWT
                     GKPAAIVGATGGVSGTAAAQAHLRSILPVLGIVLMGQPEVYFQSRPGALDDDLNVTDE
                     RVRANLQNWVTTFSAWIARFAEPREALAAAE"
     gene            1553..2137
                     /locus_tag="VHZ56_08960"
     CDS             1553..2137
                     /locus_tag="VHZ56_08960"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008835653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEX4298140.1"
                     /translation="MTTPRIGIILSTTREGRFADKPAAWLQEIAAQRTDLSFELIDLR
                     DYPLPMFDYPFSPARTAIEDDHVLPWRNKLASLDGFLFITAEYNHSIPAVLKNAIDHA
                     YAEFVRKPAGFLGYGNAAGARAIEHLRMICIEMQMAPSRFAVQVSRELLVAVLREGKT
                     LDDFPNLRDQAIAVLDDLGWWATTLKLGRERTAA"
     gene            complement(2134..2478)
                     /locus_tag="VHZ56_08965"
     CDS             complement(2134..2478)
                     /locus_tag="VHZ56_08965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX4298141.1"
                     /translation="MSREMKIVVVDQAGETHELEGLDGWRAMEVIRDWGLDIKAECGG
                     ACTCATCHVWVDEGWYGKLPPACDDEEDLIFSTLDQKPTSRLSCQIILNDGLDGLALT
                     LTPSASKGGTAS"
     gene            complement(2468..>2848)
                     /locus_tag="VHZ56_08970"
     CDS             complement(2468..>2848)
                     /locus_tag="VHZ56_08970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013531877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP(+) reductase"
                     /protein_id="HEX4298142.1"
                     /translation="SKLEGANGQLSAVHFAMDSGEAMVHATRLLPFFGLTIKLGPVAD
                     WGLQLEESVVKVDTEKFQTSEPGIFAIGDINSYAGKLKLILSGFHEAALMAQGAKHHV
                     SPGERIVFQYTTSSTKLQKKLGVA"
BASE COUNT          411 a         1123 c          835 g          479 t
ORIGIN      
        1 gtcctcgggc tgttcctgct ggcgctggtc gcgctcatcg tccgcgagac cgcctcgctc
       61 tggcggctgc gcaccctcga ccacctcaag gccgcagccg ccatcgccat cgctgccgac
      121 agcctgccgc aggcccgccc gatcctcgcc gagctgacgg cgatctatgc cccgcgcccc
      181 gacctgtccc gcgccctcgc ccgtctcgag gccgatcgcg gccagttctt cgacggcggc
      241 gagctgctga aattcggcga gcgcacgctg atggcgccgc tcgacgcccg ggcccgcacc
      301 ctcaccgccg ccgccgcgcg ccgcgtggcg ctggtcacca ccatctcgcc gcgcgccctc
      361 gtcgacatcg cctacgtcgt ctgggaaagc atccggctcg gcggcgccat cgcccggctt
      421 tacggcgccc gccccggcct cttcggcacc tggcggctca tcggcgccat cctcggccac
      481 ctcgcggtca ccggcggcct cgtcctcacc gatggcgtgg tcgagcagct ggtcggccag
      541 ggcctcgccg cccgcctgtc gcagcgtctc ggcgagggtg tcgtcaacgg cctgatgacg
      601 gtccgcgtcg gcatcgccgc catgcgcgtc gtccggccgc tgccgttcac caccgagcct
      661 gccccgctgg tcaaggactt cctgcccgag ctggcgaacg tcctcaagtc gaacgccacc
      721 tcctgaacgg cgtccggcgc gcctctggga tctgtgaaca gcgtgttcgc agcgcacagt
      781 cctgtgccgt cttgcagcgg atgcttgccg ggcacatcta gtgtctcagt tacaaacaga
      841 taccaaggat gacttcagga atgttccggg tagcggtgat ggtcggcagc acgcggtcgg
      901 cttcgtccaa tctcaaactc gctcaggcgc tcgagaagct ggccagcggc cggctcgcgt
      961 tcgattacct cgatatcggc agcctgccct tctacgacga gacgctgtgg gacaacccgc
     1021 ccgaggcggt cgtggccctc aagcagcgca tcgccgaggc cgacgcggtg ctcttcgtca
     1081 cgcccgaata caaccgttcg atccccggcg ccctcaagaa cgccatcgac tggccgtcgc
     1141 ggcccttcgg ccagggcgtg tggaccggca agccggccgc catcgtcggc gccaccggcg
     1201 gggtgagcgg cacggcggcc gcgcaggccc atctgcgttc catcctcccc gtcctcggca
     1261 tcgtcctgat gggccagccc gaagtctact tccagtcccg gcccggcgcc ctcgacgacg
     1321 acctcaatgt caccgacgag cgcgtccgcg ccaacctcca gaactgggtc accaccttct
     1381 cggcctggat cgcccgtttc gccgagccgc gcgaagcgct cgccgccgcc gagtagtctc
     1441 cccggaagcc ggacgcggta tgcaaaatgt gccgccttgc gcccgctccg gccgcccgtc
     1501 accctgattg ccgccgcccc tcccggcggc ctcccacctc atcgagacca gcatgaccac
     1561 cccccgcatc ggcatcatcc tctccaccac gcgcgagggc cgcttcgccg acaagcccgc
     1621 cgcgtggctg caggagatcg ccgcccagcg caccgatctg agcttcgagc tgatcgacct
     1681 ccgcgactac ccgctgccga tgttcgacta tccattctcg ccggcgcgca ccgccatcga
     1741 ggacgaccac gtcctgccgt ggcgcaacaa gctcgcctcg ctcgacggct tcctcttcat
     1801 caccgccgag tacaatcact cgattccggc ggtgctgaag aacgccatcg atcacgccta
     1861 cgccgagttc gtccgcaagc ccgccggctt ccttggctac ggcaacgccg ccggcgcccg
     1921 cgccatcgag cacctgcgca tgatctgcat cgagatgcag atggcgccca gccgcttcgc
     1981 cgttcaggtc agccgcgagc tcctcgtcgc cgtactccgc gagggcaaga cgctcgacga
     2041 ttttcccaat ctccgggacc aggccatcgc cgtcctcgac gatctcggct ggtgggcgac
     2101 gaccctcaag ctcgggcgcg aacgcaccgc cgcctagctg gcggttccgc ccttgctggc
     2161 gctcggcgtc agcgtcagcg ccagcccgtc cagcccgtca ttgaggatga tctggcagct
     2221 cagccgcgat gtcggcttct ggtccagcgt cgaaaagatc agatcttcct cgtcgtcgca
     2281 cgccggcggc agcttgccgt accagccctc gtccacccac acatggcagg tcgcgcaggt
     2341 gcaggcgccg ccgcactcgg ccttgatgtc gaggccccag tcgcggatca cctccatcgc
     2401 gcgccagccg tcgagtccct cgagctcgtg cgtctcgccc gcctggtcga cgacgacgat
     2461 cttcatctca cgcgacaccc agcttctttt gcagcttggt gctcgacgtc gtgtactgga
     2521 acacgattct ctcgcccggg ctgacatggt gcttggcccc ctgcgccatc agcgccgcct
     2581 cgtggaatcc cgacaggatc agcttcagct tgccggcata ggaattgatg tcgccgatgg
     2641 cgaagatccc cggctccgag gtctggaact tctcggtgtc gaccttcacc acgctctcct
     2701 cgagctgcag cccccagtcg gccaccggcc cgagcttgat ggtcagcccg aagaacggca
     2761 gcagccgcgt cgcgtgcacc atcgcctcgc ccgaatccat cgcgaaatgc accgcgctca
     2821 gctgcccgtt ggcaccctcg agcttgct
//
LOCUS       DATAZA010000354         3069 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3638728, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000354 DATAZA010000000
VERSION     DATAZA010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3069
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3638728"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..694
                     /locus_tag="VHZ56_08975"
     CDS             <1..694
                     /locus_tag="VHZ56_08975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010914995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HEX4298143.1"
                     /translation="APRALLDKVVQVVKLVRSKGVGVYFCTQSPADVPDAVLSQLSNR
                     VQHALRAYTPRDQKAVKVAADTFRPNPAFSTAEVITQLGIGEALVSMLEEGGVPSIVN
                     RTLVRPPSSRVGPLTPEERKAVMATSPVGAAYDQVIDRESAFEVLQQKAARAAPIQAP
                     APPPASANAPRAPDPAPRQPAPPPQHRASNREGVGEAMLKSVARNVTGQLTRSVTREL
                     VRGILGGLSRGL"
     gene            694..1260
                     /locus_tag="VHZ56_08980"
     CDS             694..1260
                     /locus_tag="VHZ56_08980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298144.1"
                     /translation="MSPDAHPVLGVFASDEGPGDAERASIMSQVGWFLARKGARLVCL
                     AEDGLVPTPLVTSARTARGEVTLIADSDYSEPIGLTGVTVEHLPDHQARLARLAALST
                     LYIALPGSLASAASLYLTWVRGGGGAGRKPVVFYDHNNAFKVVRGYAADVIANSIPNH
                     DRYLQFATSADDLWNKISWLVDQGATAL"
     gene            complement(1262..1771)
                     /locus_tag="VHZ56_08985"
     CDS             complement(1262..1771)
                     /locus_tag="VHZ56_08985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4298145.1"
                     /translation="MVEPIRTVAVLVANPALSSILSMTLAGASSLRVRPFDTQIALMT
                     YLHLAPADLVVADFDSVPSRADRLAQDLRADRAIASPDLQIIALASALTPETKAASIH
                     AGIDEIIMKPMSPKYLVERVLARLAKVRLATRPAVPDGRETVRHDWSRFGDNVVPLFG
                     RKLEPQLQH"
     gene            complement(1933..2541)
                     /locus_tag="VHZ56_08990"
     CDS             complement(1933..2541)
                     /locus_tag="VHZ56_08990"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008536855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEX4298146.1"
                     /translation="MALTLPPLPYAYDALGPYMSKETLEFHHDKHHQAYVTNANKLME
                     GKGLEVLELEQMVKEVFGKDQGLFNNLGQHYNHVHFWNWMKPNGGGGATKVPGALLKQ
                     IDSDLGGFDKFRGDFIAAGTTQFGSGWAWLSLKDGKLQVSKTANGENPLVHGDAHPLL
                     GVDVWEHSYYIDYRNARPKYLEAWFDNLVNWEHVGFLYEEAK"
     gene            complement(2644..>3069)
                     /locus_tag="VHZ56_08995"
     CDS             complement(2644..>3069)
                     /locus_tag="VHZ56_08995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX4298147.1"
                     /translation="AVANLRPELWAGVLAVVPFVDVLNTMSDDTLPLTPPEWPEWGNP
                     LESKEDFRRIAEYAPYEQVAAQDYPPILALAGLTDPRVTYWEPAKWVAKLRAVKTGQR
                     PLYLKTYMEAGHQGASGRFDRLKETALSYAFALSCAGLA"
BASE COUNT          462 a         1142 c          947 g          518 t
ORIGIN      
        1 cgcccccagg gcgctgctcg acaaggtcgt gcaggtggtc aagctcgtgc gctcgaaagg
       61 cgtcggtgtc tatttctgca cccagagccc ggccgacgtg cccgacgccg tgctctcgca
      121 gctgtccaac cgcgtccagc acgcgctgcg cgcctacacg ccgcgtgacc agaaggcggt
      181 gaaggtcgcc gccgatacct tccgccccaa ccccgccttc tccaccgccg aggtgatcac
      241 ccagctcggt atcggcgagg cgctggtctc gatgctggag gagggcggcg tgccctcgat
      301 cgtcaaccgc acgctggtcc gcccgccatc gtcgcgcgtc ggcccgctca cccccgagga
      361 acgcaaggcg gtcatggcca cctcaccggt cggcgccgcc tacgaccagg tgatcgatcg
      421 cgaatcggcg ttcgaggtgc tgcagcagaa ggctgcccgt gccgcgccga tccaggcgcc
      481 ggcgccacca cccgcctccg cgaacgcccc gcgcgcgccc gaccccgccc cgcgccagcc
      541 cgcgccgccg ccccagcatc gcgcctcgaa ccgcgaaggc gtcggcgagg ccatgctcaa
      601 atcggtggcc cgcaatgtca ccggccaact cacccgcagc gtgacgcgcg agctggtgcg
      661 cggcatcctc ggcggcctga gccgaggcct ctgatgtcgc ccgacgcgca tccggtgctt
      721 ggcgttttcg cctccgacga ggggccgggc gatgccgagc gcgcctcgat catgtcgcag
      781 gtcggctggt tcctcgcccg caagggcgcg cgtctggtct gcctcgccga ggacgggctc
      841 gtgcccaccc cgctggtcac cagtgcccgc actgcccgcg gcgaggtcac cctcatcgcc
      901 gattccgact acagcgagcc gatcgggctc accggcgtga ccgtcgagca tctgcccgat
      961 caccaggccc gcctcgcccg cctcgccgcg ctctccaccc tctacatcgc gctgcccggc
     1021 tcgctcgcct ccgccgcgag cctctatctc acctgggtgc gcggcggcgg cggcgccggg
     1081 cgcaagcccg tcgtctttta cgatcacaac aacgccttca aggtggtgcg cggctatgct
     1141 gccgacgtca tcgccaactc gatccccaat cacgaccgct acctgcagtt cgcgacctcg
     1201 gccgatgatc tgtggaacaa gatttcctgg ctggtcgacc agggtgcaac ggcgctctag
     1261 cctagtgctg cagctgtggt tccagcttgc ggccgaacag cggcaccacg ttgtcgccga
     1321 accgcgacca gtcgtggcgc accgtctctc gcccatccgg caccgccggc cgcgtcgcca
     1381 ggcgcacctt cgccagccgc gccagtaccc gctcgacgag atatttcggc gacatcggct
     1441 tcatgatgat ctcgtcgatc ccggcatgga tcgaggcggc cttggtttcc ggcgtcagcg
     1501 cgctcgccag cgcgatgatc tgcagatccg gcgaggcgat cgcgcggtcg gcccgcaggt
     1561 cctgcgccag ccggtcggcg cgcgacggca cgctgtcgaa atcggcgacc accaagtcgg
     1621 ccggcgcgag gtgcaggtag gtcatcagcg cgatctgcgt atcgaacggc cgcacccgga
     1681 gcgacgacgc ccccgccagc gtcatcgaca ggatcgatga cagcgccgga ttggcgacaa
     1741 gcacggcaac ggtccggatc ggttcgacca aggcatctcc actggttaac caatccttaa
     1801 cacgccgcca cccgccgttg aagcgagccc cggccacacc gcaataaaaa acccgccgcg
     1861 atcgcggcgg gcctgcatgt ccatccccgc tgtcgtcccg gcgcaggccg ggagcgcggt
     1921 tacgccccgg cgctacttcg cctcttcgta gaggaagccg acgtgctccc agttcacgag
     1981 gttgtcgaac cacgcctcga ggtatttcgg ccgggcgttg cggtagtcga tgtaatagct
     2041 gtgctcccac acgtcgacgc ccagcagcgg atgcgcgtcg ccgtgcacca gcgggttctc
     2101 gccattcgcc gtcttgctca cctgcagctt gccgtccttc aggctgagcc acgcccagcc
     2161 cgaaccgaac tgcgtcgtgc cggcagcgat gaaatcgccc cggaacttgt cgaagccgcc
     2221 cagatcgctg tcgatctgct tgagcagcgc gcccggcacc ttggtcgcgc cgccgccgcc
     2281 attcggcttc atccagttcc agaaatgcac gtggttgtag tgctggccga ggttgttgaa
     2341 gagcccctgg tccttgccga acacctcctt gaccatctgc tcgagctcca gcacttcgag
     2401 gcccttgccc tccatcagct tgttggcgtt cgtcacatac gcctggtggt gcttgtcgtg
     2461 gtggaactcc agcgtttcct tggacatgta cggtccgagg gcgtcgtagg cgtagggcag
     2521 cgggggaagg gtcagggcca tgaggatcgc tccaattttc ggatttcttg ggccgtcaac
     2581 atcggccatc ggcgatggat ataagccttt tggccgggcg cgccaaccgc gcctttcagc
     2641 ggtctatgcc aatcccgcgc agctcagcgc aaaggcatag ctcagcgccg tttccttgag
     2701 ccggtcgaac cgccccgagg cgccctggtg ccccgcttcc atgtaggtct tgaggtagag
     2761 cggccgctgg ccggtcttca ccgcccgcag cttcgccacc cacttggccg gctcccaata
     2821 cgtcacccgc ggatcggtca gtccggccag cgccaggatc ggcgggtagt cctgcgccgc
     2881 cacctgctcg tacggggcgt attccgcgat ccgccggaaa tcttctttcg attcgagcgg
     2941 attgccccat tcgggccatt ccggcggcgt cagcggcagc gtgtcgtcgc tcatcgtgtt
     3001 gagcacgtcg acgaacggca ccaccgccag cacgcccgcc cacagctccg gcctgaggtt
     3061 ggccacggc
//
LOCUS       DATAZA010000355         1795 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_389849, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000355 DATAZA010000000
VERSION     DATAZA010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1795
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389849"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1354)
                     /locus_tag="VHZ56_09000"
     CDS             complement(<1..1354)
                     /locus_tag="VHZ56_09000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX4298148.1"
                     /translation="MTEHAVVIAGGGPTGMMLAGELALAGVDVAIVERRASQELLGSR
                     AGGLHSRTLEVLDQRGIADRFLAEGQVTQNAAFAGVSLDLSSFPTRHNYGLGLWQSHI
                     ERILAGWVGELPVTIYRGREVTGFAQDDTGVHVEVSNGESLRARYLVGCDGGRSLIRK
                     AAGIDFPGWDPTTSSLLAEVEMTVQPELGVHRTALGVHAFGKEKYEIRDGKIVYPDGG
                     PIRVMVTEEHVEHAGEPSLHDLSQALIAACGTDYGAHNPTYISRFTDVTRQAAAYRDK
                     RVLLAGDAAHVHAPDGGQGLNTGVQDAVNLGWKLAQVVKGTSPESLLDTYHAERHPVA
                     ARVLRNTMASVALRRPDERTSALRETMSELFSMDEPRKRFAAMISGLGIHYDLGEGHP
                     LLGRRIPDLDLITANGPLRLFTLLHQARPVLLNLGEPGAFDITPWTDRVQRIDAKYEG
                     T"
     gene            complement(1524..>1795)
                     /locus_tag="VHZ56_09005"
     CDS             complement(1524..>1795)
                     /locus_tag="VHZ56_09005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298149.1"
                     /translation="PQRQDHQGDGRHPGPNGLDDVSDVQEVVTSSEAGYRPVPLLAWQ
                     SISPVSGRISGSVFAGFPDPELDPDPVPRNTPTFRKELAPSTPEK"
BASE COUNT          297 a          567 c          597 g          334 t
ORIGIN      
        1 acgtgccttc gtacttggcg tcgatccgct gaacgcgatc cgtccatgga gtgatgtcga
       61 aggcgccggg ctcgccgagg ttgagcagca ctgggcgggc ctggtgcagc agggtgaaga
      121 gccgcagcgg gccgttggcg gtgatcaggt cgagatcggg aatgcggcga ccgagcagcg
      181 ggtgtccctc gccgaggtcg taatgaatgc ccaggccgga gatcatcgcg gcgaatcgtt
      241 tgcgcggctc gtccatactg aacagctcag acatcgtttc gcgcagcgcg ctggtgcgtt
      301 cgtccgggcg gcgaagcgcg accgacgcca tggtgttgcg cagcacgcgg gcagcgaccg
      361 ggtgacgctc ggcgtggtag gtatcgagca ggctttccgg cgatgtccct ttgactacct
      421 gggccagctt ccagcccaga ttcactgcat cctgcacgcc ggtgttgaga ccctgtccgc
      481 cgtccggggc atgcacgtgt gcggcgtcgc cagccagcag gacgcgcttg tcgcggtagg
      541 ccgcggcttg ccgagtcaca tcggtgaacc tggagatgta ggtgggattg tgagccccgt
      601 agtcggtccc gcatgcggcg atgagcgcct ggctgagatc gtgcaggctg ggctccccgg
      661 catgttcaac gtgctcttca gtcaccatga ctcgtatcgg gcccccatcc gggtagacga
      721 tcttgccgtc gcggatctcg tacttctcct tgccgaaggc atggacgcca agggcagtgc
      781 ggtggacgcc caattccggc tgcacggtca tctcgacctc ggcgagcagg ctgctcgtcg
      841 tcggatccca gccggggaag tcgatgccgg ctgccttccg gatgagactg cgtccgccgt
      901 cgcacccgac gagataccgc gcccgcaacg actcgccgtt ggagacctcg acgtggacgc
      961 ccgtatcgtc ctgcgcgaat ccggtcactt cgcgtccgcg atagatcgtc accggcagct
     1021 cgccgaccca accggcgagg atgcgctcga tgtggctctg ccacagcccg agtccgtagt
     1081 tgtgccgggt gggaaagctg ctgaggtcca aggagacgcc ggcgaaggcc gcgttctgcg
     1141 tcacctgccc ctctgcgagg aagcgatcgg cgattccgcg ctgatcgaga acctcgaggg
     1201 tgcgtgagtg caaaccgcct gcgcgcgagc caaggagctc ctggctggcg cgccgctcga
     1261 caatggcaac gtcgacgccc gccaatgcca gctcgcccgc cagcatcatc cctgtcggac
     1321 cacctccggc aatcaccact gcatgttcgg tgatcgccac cgctccgttg gtattccgca
     1381 tgtcgcatct cccattcctg aagatttttg agccagccaa agagcgtggc cgactcgtgc
     1441 gactctacgg aaggaccggg gccttgcggc aagccccccg gcgcgctata tcttaagaat
     1501 ggggggagtc gatgactccc cttttacttt tccggtgtgg acggggcaag ctctttgcga
     1561 aacgtcggcg tgttgcgcgg gacgggatcg ggatcgagct ccggatcggg aaaacctgca
     1621 aacaccgacc cagagatacg cccagagaca ggcgagatgc tttgccaagc aagcaggggt
     1681 accgggcggt accccgcttc gctgctggtt acgacttctt gaacatcact gacatcgtcg
     1741 aggccgttgg ggccggggtg acgtccgtct ccttgatggt cttgccgttg gggct
//
LOCUS       DATAZA010000356        10798 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4102753, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000356 DATAZA010000000
VERSION     DATAZA010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 10798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10798
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4102753"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..799
                     /locus_tag="VHZ56_09010"
     CDS             <1..799
                     /locus_tag="VHZ56_09010"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX4298150.1"
                     /translation="MDDNLRERQELETAMQQAMERGEISLMFQPQAALEDGRIVGVEA
                     LMRWSHPELGTVSPERFIPVAEETGKIVELGRWILEAACREVVAWPGELRLSINVSPI
                     QFELVDVVGEIRDTLSHTGFPAERLDVEITEGIFVSNTRSTIEALHKLRNLGVAIALD
                     DFGTGYSSLSYLGRLPVDKIKIDQSFVKRLPGDQEAGVIIRAVMMLSEALNKVVIAEG
                     IETADQAWMLKMMGCKVGQGYHFGRPQSAAEMREALADGRLAQTRAG"
     gene            complement(818..2083)
                     /locus_tag="VHZ56_09015"
     CDS             complement(818..2083)
                     /locus_tag="VHZ56_09015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018426162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HEX4298151.1"
                     /translation="MSSPLRHCGLDFGTSNTTLAIARGNASPRLMALEDGKPTIPSVI
                     FFDFDENRELFGRAAIADYIAGTDGRMMRSLKSILGSSLADERVRIKQRILSYLQIIG
                     TFVAELKRRAEADIGEEFDSVVLGRPVHYVDDDPLADRKAQDQMESTVRDCGFRHIAF
                     QFEPIAAALDYEQQVTREEIGLVVDLGGGTSDFSVVRVSPERARAADRQGDILSTAGV
                     HVGGTDFDRHLSLRAVMGELGYQTPTADGKRPLPSAPYVDLATWHRINQLYDPAMLRQ
                     LRQTAREARDPERVENLIAIVAGRDGHRLAGAVEDAKVALTEAATVRLEFAGETVELH
                     PAIARSQLENAIRRDLERIEDKLREVVAVAGLTASRIDTLILTGGSTRIPAILQRLRA
                     NFPDARFVETDAFASVGLGLALDARRRFG"
     gene            2207..3313
                     /locus_tag="VHZ56_09020"
     CDS             2207..3313
                     /locus_tag="VHZ56_09020"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HEX4298152.1"
                     /translation="MIRLAIAALLVALLPAAPAMAESLEQMAGQMIIVGFAGDDAGDA
                     SVQAVTREIAAGTLGGIMYLKTNVKSLAAVKAMNAAFRAASPDLPPFLTLDQEGGAVQ
                     RLTADVGFPDVPNALRVAATDTPAQAGAVYLKMAKGLARLGFTVNFGPVADLNINPDN
                     PVIGKFGRSFSASGATVAAYDQAFIDAHHEAGLLTALKHFPGHGSSTTDSHLGFVDIS
                     KTWTPKELDPYKTLFADGYSDFVMVGHLYDAAYAQSTDGARLPASLSPEWIGGVLRGQ
                     LKFAGVVISDDLEMGAIRKEFDLHDTIVRAVDAGVDVLLFSNTAAYSPDLADTVRAVL
                     VAEAKADPAFEKKIEASYGRIAALKARIGQLGGD"
     gene            3379..3972
                     /locus_tag="VHZ56_09025"
     CDS             3379..3972
                     /locus_tag="VHZ56_09025"
                     /inference="COORDINATES: protein motif:HMM:NF013933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HEX4298153.1"
                     /translation="MTAAIFTAFIAAAIPAFFTPGPNNLMLMASGAKFGFRRTIPHGT
                     GVAVGFALMVVLVGLGLGEMFQYVPWLKTALEYLAAAYLLWLAWTLLGLKIHDGTARE
                     RPLTFIEATAFQWINPKAWAMAVSFGAMVVDPGPGRLAGIALLGVGSLLIGGLSSPTW
                     MIFGDRLEKLIKRTGGERFVGIGLALLVVASVVLFLL"
     gene            4017..4871
                     /locus_tag="VHZ56_09030"
     CDS             4017..4871
                     /locus_tag="VHZ56_09030"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009468667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HEX4298154.1"
                     /translation="MADSAQASDVRQVRTLFISDVHLGMRPTRIAQCVDFLRHHEAET
                     IYLIGDIVDGWRLAKSWYWPPVYNEFVEELLAKAARGTRMVVLPGNHDEFLREYLGTY
                     FGEVEFVDQTVHTTAIGRTYLVLHGDQFDVVVAHAKWLAHVGDWAYRTALQVNVGINW
                     VRRRLHRPYWSLSAWAKHKVKNAVSLIGRFEEALTLAARDTGADGVICGHIHFADMHE
                     RLGIHYVNTGDWVESCTAVAETMDGQFELIKWLAQPVAVVRPKTPRRGLRIRRRPKAS
                     PDLGAPSP"
     gene            4948..6147
                     /locus_tag="VHZ56_09035"
     CDS             4948..6147
                     /locus_tag="VHZ56_09035"
                     /inference="COORDINATES: protein motif:HMM:NF013473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4298155.1"
                     /translation="MASIDRARGLTPELRATIYYFTFFMTSGASTAYAGIWFSADQGL
                     SPGEIGLINSLPTFIMLVLNLVIGRVADRAEDWRRVIVIGALLAGIIPIGLFWAHGFL
                     PILLVWTLAALPVAAVGPVQDAATLRMTRRNGTDFGFIRACGTVGFLIVVAITGPLVS
                     WFGAGAFLPFFVVLALLRGGTSLGLPNFRAPRQVLTLATGAASRMREVMKPWFLLPLV
                     GWSMIAATHLILNGFQALLWKQQGLPELDISLLIALGAASEATMMIVFKRFVGRFPAR
                     LVILISAVASTLRWVAFGFAPDIPFLIVLQLLHSVTFAMGYLGCVHFIANWTSEDIAA
                     EAQSFFQVLQQGMGVVAVAGFGVLAGIFGYHAYFASAAFAAIGAAMIFISMRLMQPKV
                     HGGEAHA"
     gene            complement(6242..>10798)
                     /locus_tag="VHZ56_09040"
     CDS             complement(6242..>10798)
                     /locus_tag="VHZ56_09040"
                     /inference="COORDINATES: protein motif:HMM:NF013600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298156.1"
                     /translation="RILYGLQSKSSQTPTLAATLIAVGWVIAIVLVAIVRDGREFGTG
                     AFFASNDFIGLVALAVIPVLGFFAISTLIRRAQDLRNAATAVTHAAIRLAEPETTASE
                     KVASVGQAVRREVNALGDGLERALSRAGELEVMIHNEVTALERTYSDNESRMRALIQE
                     LASQREAVITNTERVREAITESHTGLVFDLDMISQRIAGTIVESGGNLTKALETAGNS
                     LNGAFGERTESFVSLIDQRTSHLLSALDDSASRLNITLEDRSSTISQAFENRTMELSS
                     VIDARMTSLTDALDSRAVTLSEAIENRTSSLAKLLSQGGITLLDQLRDRGHEVSSALD
                     MIGSRISADIQARSREAETLMGSLSKQLDESLSIQVNSMESKLQTAMIELSGALDDTT
                     ERARVTLMGAGSQNLTQFDARLDEIAVVIDTRLQALDGVVGDKGEKLVSALEKHNASF
                     AARANVLEMALDEKSGHFNDIVSQRTREMIETLGQRSKQITEVIGNRSREISDALEGH
                     SQILADALDSRTQALNDTLSTRTSELSESLIGRATEINELLVGRTTLLDNSLTTHVAQ
                     IGATMDTRLETVDGTLQQHQNALAATLDQRTQLLATTVGTRSSELSEALNTRTQQLAE
                     VLGTHTAAIAGAIGDRTMELARTIDAQGTAARDKIDNSLRSVTEVMADRATAVTTLIA
                     SKVGEVNDNLGRGIDSAILRIADAESGVTARIDGAAATVGESARKAADIIETGVNSAR
                     KAITDMVDQRLGTLPEAITARADITAERLASLNTAINTALVQSMADLEAGADRIEETI
                     SKRIVEATANITLDVAETADKMDIHVRQALEQIHTASRSIDELISIKAVAAAEAIENR
                     VNALNTSVTQQSDGLAALVNARSQELESMLRSHGNILQDSLAASAGQAEQLMSATSAR
                     ILSDASEALSRLNQSNQVLNQVLETTNGNLAQLETSVASQTAAYSATVRDAVGSTEEA
                     GRMVGEQVSALQSTVRSMIDEFASMMGSLNSEVAVIDKSASALTQAGSQSIDALEERR
                     SAMDALAESFTARADEIDDRMRAFAQSIATTVNDTERRLLDARSQMESIVSGAGGQVE
                     SAMSATTGQLQDALATATGQIEAVLGSAGDRIESALSGAGDRIETVLGGAGDRIETVL
                     GGAGDRIESVLGGAGGQVEDAIAQTSERLSTALKSTTGDVAAQLVQFREAASSETEKA
                     SDVLRQTQATMILEMQQALEEATRRFNETATAMRQTAKEVGSELESTRSELARGVMEL
                     PEETRTSAAAMRRVVAEQIEALSELNAIVRAQSATHDLSERRPPAPRQEAPARAEPRP
                     EPRPEPAPRAETPARVVDAPRPAAHAPAAPRHATIAEAPAAAPAPRPAAAPVAEAPKP
                     APAPRSDDSGGGWLRDVLRNANGPAASPQQNLTALTDEIARSIDPAALADAWNRYQRG
                     EQNVFSRRIYTLTGQSTYDQIKRRMTSDADFTKSAQSYMSEFEQLLQRAASGTDPVNE
                     TRAFLTSDRGKVYTMLAHASGRLG"
BASE COUNT         1527 a         3273 c         4062 g         1936 t
ORIGIN      
        1 gatggacgac aatctgcgcg agcggcagga gctggagacg gcgatgcagc aggcgatgga
       61 gcgcggcgag atttcgctga tgttccagcc gcaggcggcg ctggaggacg ggcggatcgt
      121 cggcgtcgag gcgctgatgc gatggtcgca tccggaactg ggcacagtct cgcccgagcg
      181 cttcattccg gtggcggagg agaccggcaa gatcgtcgaa ctcggccgct ggatcctcga
      241 ggcggcgtgc cgggaggtgg tggcgtggcc gggcgagctg cggctctcca tcaacgtgtc
      301 gccgatccag ttcgaactgg tcgacgtggt cggcgaaatc cgcgacacgc tgtctcacac
      361 cggctttccg gcggagcggc tcgacgtcga gatcaccgag gggatcttcg tttcgaacac
      421 ccgttcgacc atcgaggcgc tgcacaagct gaggaacctc ggtgtcgcca tcgcgctcga
      481 cgatttcggc accggctact cgtcgctgag ctatctggga cggctaccgg tcgacaagat
      541 caagatcgac cagagcttcg tgaagcggct gccgggcgac caggaagccg gcgtcatcat
      601 ccgcgcggtg atgatgctga gcgaagcgct caacaaggtg gtgatcgccg aaggcatcga
      661 gacggccgac caggcgtgga tgctcaagat gatgggctgc aaggtggggc agggctatca
      721 tttcggccgg ccgcagagcg cggcggagat gcgcgaggcg cttgccgacg gccgcctcgc
      781 tcagacgcgc gcggggtagc cgggcgagcc gcgcggctca gccgaacctg cggcgggcgt
      841 cgagcgccag ccccaatccg acgctggcga aggcgtcggt ctcgacgaag cgggcatccg
      901 ggaaattggc acgcaagcgc tggaggatcg ccgggatgcg ggtcgagccg ccggtgagga
      961 tcagcgtgtc gatgcggctg gcggtcagtc cagcgacggc gacgacctcg cgcagcttgt
     1021 cctcgatgcg ctcgagatcg cgccggatgg cgttctcgag ctggctgcgg gcaatggccg
     1081 ggtgcagctc gaccgtttcg ccggcgaatt cgaggcgcac cgtggcggct tcggtgagcg
     1141 cgaccttggc gtcctcgacg gcgccggcca gccggtggcc gtcgcggccg gcgacgatgg
     1201 cgatgaggtt ttcgacccgc tccggatcgc gcgcctcgcg cgccgtctgc cggagctgcc
     1261 gcagcatcgc cggatcgtag agctggttga tgcgatgcca ggtggcgaga tcgacatagg
     1321 gcgccgaggg aaggggccgc ttgccgtcgg cagtcggcgt ctggtagccg agctcgccca
     1381 tcacggccct gagcgacagg tggcggtcga aatcggtgcc gccgacatgg acgccggcgg
     1441 tcgacaggat gtcgccctgc cggtcggccg cacgggcgcg ctccggcgag acccgcacga
     1501 ccgaaaaatc cgaggtgccg ccgccgagat cgacaacgag gccgatctct tcgcgcgtca
     1561 cctgctgctc gtagtcgagg gccgcggcga tgggctcgaa ctggaacgcg atgtggcgga
     1621 agccgcagtc gcgaacagtg ctttccatct ggtcctgcgc cttgcggtcg gcgagcggat
     1681 cgtcgtcgac gtagtgcacg ggccggccaa ggacgacgct gtcgaactcc tcgccgatat
     1741 cggcctcggc ccgacgcttc agctcggcga cgaaggtgcc gatgatctgc aggtacgaca
     1801 ggatgcgctg cttgatgcgc accctttcgt cggcgagcga cgagccgagg atggatttca
     1861 gcgaccgcat catgcggccg tcggtgccgg cgatgtagtc ggcgatcgcg gcgcggccga
     1921 acagctcgcg attctcgtcg aagtcgaaaa agatcaccga cgggatggtc ggcttgccgt
     1981 cctcgagcgc catgagccgg ggcgatgcgt tgccgcgggc gatcgcgagg gtggtgttgg
     2041 acgtaccgaa atcgaggccg caatggcgca acgggctgga catggcggat cgcgggggtg
     2101 acgggagggc gtctatagcg atccggttcc ggcggggcaa ccgcgtttac gatttcgccg
     2161 caaagccgtg gcaagcatcg ggcctcctga tccgccgagg tgtttcgtga tccgactggc
     2221 tattgccgcg ctgctggtgg cgctccttcc tgcggcgccg gcaatggcgg aatcgctcga
     2281 gcagatggcg gggcagatga tcatcgtcgg ctttgccggc gacgatgccg gggatgccag
     2341 cgtgcaggcg gtcaccaggg agatcgcggc cgggacgctg ggcgggatca tgtacctcaa
     2401 gaccaacgtc aagagccttg cggcggtgaa ggcgatgaac gcggcgttcc gcgccgcgtc
     2461 gcccgatttg ccgccgttcc tcaccctcga tcaggagggc ggggcggtgc agcgcctcac
     2521 tgccgatgtc ggctttccgg acgtgcccaa tgccctgcgc gtggcggcga ccgacactcc
     2581 ggcgcaggcc ggtgcggtgt acctgaagat ggccaagggc ctcgcccgcc tcggcttcac
     2641 ggtgaatttc gggccggtcg ccgacctcaa catcaatccc gacaacccgg tcatcggcaa
     2701 gttcgggcgc tcgttcagcg ccagcggcgc gacggtggcg gcctacgacc aggcattcat
     2761 cgatgcgcac cacgaggcgg ggctgctgac cgcgctcaag cattttcccg gccacggctc
     2821 gagcacgacg gacagccatc tcggcttcgt cgacatcagc aagacatgga cgcccaagga
     2881 gctcgatccg tacaagacgc tgttcgccga cggctacagc gatttcgtga tggtcgggca
     2941 tctctacgac gccgcctatg cacagagcac ggacggcgcc aggctgccgg cgagcctgtc
     3001 gccggaatgg atcggcgggg tgttgcgcgg gcagctgaaa tttgccggcg tcgtgatcag
     3061 cgacgatctc gagatggggg cgatccgcaa ggaattcgac ctgcacgaca cgatcgtgcg
     3121 ggccgtcgat gccggagtgg acgtgctgct gttctcgaac acggcagcct attcgccgga
     3181 cctcgccgac acagtccggg cggtgctggt ggccgaggcc aaggccgacc cggcgttcga
     3241 aaagaaaatc gaagccagct acggccggat cgcggcgctg aaggcgcgga tcggccagct
     3301 cggcggggat tgatcggcgg cgcgggctgc gctaaaggga cagtggtgct gacataactg
     3361 tcggggggag tccgcaccat gaccgccgcg atctttactg ctttcattgc tgccgccatt
     3421 ccggcgttct tcacgccggg tcccaataat ctgatgctga tggcgtccgg cgccaagttc
     3481 gggttccggc gtacgattcc gcatggcacc ggggtggccg tcggctttgc cctgatggtg
     3541 gtgctggtcg ggctggggct gggggagatg ttccagtacg tcccctggct gaagacggcg
     3601 ctggagtacc tggcggcggc ctatctgctg tggctcgcct ggaccctgct cggcctcaag
     3661 atccatgacg gcaccgcccg cgagcggccg ctgactttca tcgaggccac ggcgttccag
     3721 tggatcaatc cgaaagcctg ggcgatggcg gtgagctttg gcgccatggt ggtcgatccg
     3781 gggccggggc gactggccgg gatcgcgctg ctgggcgtgg ggagcctgct gatcggggga
     3841 ttgtcgtccc ccacctggat gatcttcggc gaccggctgg aaaagctgat caagcgcacc
     3901 ggcggggagc gattcgtcgg catcggcctg gcgctgctgg tggtcgcttc ggtggtgctg
     3961 tttcttctct gatcctttgc gggtaagttc gcgttcccct cgggacagga ggatcgatgg
     4021 ctgattccgc ccaagcttcg gacgtgcgcc aggtgcggac gctgttcatc agcgacgtgc
     4081 atctgggcat gcggccgacg cggatcgccc agtgcgtcga tttcctgcgg caccacgagg
     4141 ccgagaccat ctacctgatc ggcgacatcg tcgacggctg gcggctggcc aagagctggt
     4201 actggccgcc ggtctacaac gagttcgtcg aggaactgct ggccaaggcg gctcgcggta
     4261 cccgcatggt ggtgctgccg ggcaaccacg acgagttcct gcgcgaatat ctcgggacgt
     4321 atttcggcga ggtcgagttc gtcgaccaga cggtacacac gacggcgatc gggcggacct
     4381 acctggtgct gcacggcgat cagttcgacg tggtggtggc gcatgccaaa tggctcgcgc
     4441 atgtgggcga ctgggcctac cggacggcgc tgcaggtcaa tgtcggcatc aattgggtgc
     4501 gccggcgcct gcaccggccg tactggtcgc tgagcgcctg ggccaagcac aaggtcaaga
     4561 acgcggtgag cctgatcggc cgcttcgagg aggcactgac gctggcggcg cgcgacaccg
     4621 gcgccgacgg ggtgatctgc ggccacatcc attttgccga catgcacgag cggctgggca
     4681 tccactacgt caacaccggc gactgggtgg aaagctgcac ggcggtggcc gagacgatgg
     4741 acgggcagtt cgagctgatc aaatggctgg cgcagccggt cgcggtggtg cgtcccaaga
     4801 cgccgcggcg cggcctgcgc atccggcggc ggccgaaggc gtccccagat ctgggtgcgc
     4861 cgtcgccgta gcgccagcaa gcttgtgtca ttccggcttt ccggccattt tggcgatggg
     4921 cggattcctg ctccggggca ttcctccatg gcttcgatcg acagggcgcg ggggctgacg
     4981 cccgagctgc gcgccacgat ctattacttc acgttcttca tgacctcggg cgcctcgact
     5041 gcctatgccg ggatctggtt cagcgccgac caggggctgt cgcccggcga gatcggcctc
     5101 atcaattcgc tgccgacctt catcatgctg gtgctcaatt tggtgatcgg ccgtgtcgcc
     5161 gaccgcgcgg aggactggcg gcgggtgatc gtgatcggcg cgctgctggc cgggatcatc
     5221 ccgatcgggc tgttctgggc gcacggcttc ctgccgatcc tgttggtgtg gacgctggcg
     5281 gcgctgccgg tggcggcggt cgggccggtg caggatgcgg cgacgctgcg gatgacgcgc
     5341 cgcaacggca cggatttcgg cttcatccgc gcctgcggca cggtgggctt cctgatcgtg
     5401 gtggcgatca ccgggccact ggtgtcatgg ttcggtgccg gcgctttcct gccgtttttc
     5461 gtggtgctgg cgctgctgcg cggcggcacc tcgctgggac tgcccaattt tcgcgcgccg
     5521 cggcaggtgc tgacgctggc gaccggcgcg gcaagccgga tgcgcgaggt gatgaagccg
     5581 tggttcctgc tgccgctggt cggctggtcg atgatcgcgg cgacgcacct catcctcaac
     5641 ggcttccagg cgctgctgtg gaagcagcag gggctgcccg agctcgacat ctcgctgcta
     5701 atcgcgctcg gggccgccag cgaggcgacg atgatgatcg tgttcaagcg cttcgtcgga
     5761 cgcttcccgg cgcggctcgt catcctgatc tcggcggtcg cgtcgacgct gcgctgggtc
     5821 gctttcggct ttgcgccgga cattccgttc ctgatcgtgc tgcagctcct ccactcggtg
     5881 acgttcgcga tgggctatct gggctgcgtg catttcatcg cgaactggac cagcgaggac
     5941 atcgcggcag aggcgcagag cttcttccag gtgctgcagc agggcatggg cgtggtcgcc
     6001 gtcgccggct tcggggtgct ggcagggata ttcggctacc acgcctattt cgcctcggcc
     6061 gcgtttgccg cgatcggggc ggcgatgatc ttcatctcga tgcggctgat gcagcccaag
     6121 gtgcatggcg gcgaagccca cgcctgacgg gcaagcgtcc gctgaccgga gcggcactcc
     6181 aaaaaaagac cccgccggag cggggtcatt gcttggaggt ctgcttgtct tttcttgaag
     6241 cttagccgag gcggccgctg gcgtgggcga gcatggtgta gaccttgccg cggtcggagg
     6301 tgaggaaggc gcgtgtctcg ttcaccgggt cggtgccgct cgcggcccgc tgcaggagct
     6361 gttcgaattc gctcatgtag ctctgcgcac tcttggtgaa gtctgcatcg ctggtcatcc
     6421 ggcgcttgat ctggtcgtag gtggactggc cggtcagcgt gtagatgcga cgcgagaaga
     6481 cgttctgctc gccccgctgg tagcggttcc aggcgtcggc gagcgccgcc gggtcgatgg
     6541 agcgggcgat ctcgtcggtg agcgccgtga ggttctgctg cggcgaggcc gcaggaccgt
     6601 tggcgttgcg cagcacgtcg cgcagccagc cgccaccgct atcgtcgctg cgcggggcag
     6661 gggcaggctt gggcgcctcg gcaaccggcg cggcggccgg gcgaggtgcc ggggcggccg
     6721 caggcgcttc ggcgatggtg gcatggcgcg gcgcggccgg ggcatgagcg gccggacggg
     6781 gcgcgtccac gacccgggcg ggggtttcgg cacgcggtgc gggctccgga cggggctcgg
     6841 gccgcggctc ggcgcgggcg ggagcctcct gccgaggcgc cggtggccgg cgctcgctca
     6901 ggtcatgggt ggccgactgc gcccggacga tggcgttgag ctcgctcagt gcctcgatct
     6961 gctcggcgac gacgcgccgc atggcggcgg cactggtgcg cgtctcctcg ggcagctcca
     7021 tgacgccgcg ggcgagttcg gagcgggtcg attcgagctc gctgccaact tccttggcgg
     7081 tctggcgcat ggcggttgcc gtctcgttga agcggcgggt cgcctcctcc agcgcctgct
     7141 gcatctcgag gatcatggtg gcctgcgtct ggcgcagcac gtcggaggcc ttttcggtct
     7201 cgctgctggc cgcttcgcgg aactgcacga gctgggcagc gacgtcgccg gtggtggact
     7261 tgagggcggt cgagagccgc tcgctggtct gggcgatggc atcctcgacc tggccgccag
     7321 cgccgccgag gaccgactcg atgcgatcgc cggcaccgcc gaggaccgtc tcgatgcggt
     7381 cgccggcgcc gccgaggact gtctcgatgc gatcgccggc gccactgagc gccgattcga
     7441 tgcggtcgcc ggccgagccg agcacggctt cgatctggcc ggtggcggta gcgagggcgt
     7501 cctgcagctg tccggtggtg gcggacatcg ccgattcaac ctggccgccg gcgccggaga
     7561 cgatcgactc catctgggag cgggcgtcga gcaggcggcg ctcggtgtcg ttgacggtgg
     7621 tggcgatcga ctgcgcaaag gcgcgcatgc ggtcgtcgat ctcgtcggca cgggcggtga
     7681 agctctcggc cagcgcgtcc atggcggacc ggcgctcctc gagggcatcg atcgactggc
     7741 tgccggcctg ggtgagcgcg gacgcggatt tgtcgatgac ggcgacctcg ctgttgaggc
     7801 tgcccatcat cgaggcgaat tcgtcgatca tgctgcgcac ggtcgattgc agggcactga
     7861 cctgctcgcc gaccatcctg ccggcctctt cggtcgagcc gacggcatcg cggacggtgg
     7921 ccgagtaggc ggcggtctgg ctggcgacgc tggtctcgag ctgggcgagg ttgccgttgg
     7981 tggtctccag cacctggttg agcacctggt tggactggtt gagccggctg agggcttcgc
     8041 tggcgtccga gaggatgcgg gccgaagtcg ccgacatcag ctgctcggcc tggccggcgc
     8101 tggcagccag cgagtcctgc aggatgttgc cgtgcgagcg cagcatggat tcgagttcct
     8161 ggctgcgggc gttgacgagg gcggcgagac cgtcgctctg ctgggtgacc gaggtgttga
     8221 gcgcgttgac gcggttctcg atggcttcgg cggcagcgac cgccttgatc gagatgagct
     8281 cgtcgatcga gcgcgaggcg gtatggatct gctccagcgc ctggcggacg tggatgtcca
     8341 tcttgtcggc ggtttcggcg acgtcgagag tgatattggc ggtggcctcg acgatgcgct
     8401 tggagatggt ctcctcgatg cggtcggcgc cggcctcgag gtcggccatc gactgcacca
     8461 gcgcggtgtt gatggcggtg ttgagcgagg cgaggcgctc ggccgtgatg tcggcgcggg
     8521 cggtgatcgc ctcgggcagg gtgccgagcc gctggtcgac catgtcggtg atcgccttgc
     8581 gggccgaatt gacgccggtc tcgatgatgt cggcggcctt gcgggcgctc tcgccgacgg
     8641 tggcggcggc gccgtcgatg cgggcggtga cgccactctc ggcatcggcg atgcggagga
     8701 tggcgctgtc gatgccgcgg ccgaggttgt cgttgacctc gccgaccttg ctggcgatga
     8761 gcgtggtgac ggcggtggcg cggtcggcca tgacttcggt gaccgaacgc aggctgttgt
     8821 cgatcttgtc gcgggctgcg gtgccctgtg catcgatggt gcgggcgagc tccatggtgc
     8881 ggtcgccgat ggcgccggcg atggccgcgg tgtgggtgcc gaggacttcg gcgagctgct
     8941 gggtgcgggt gttcagcgct tcgctgagct cggacgaacg cgttccaacc gtcgtggcga
     9001 gcagctgggt gcgctggtcg agcgtagcgg cgagggcgtt ctggtgctgc tgcagcgtgc
     9061 cgtcgacggt ctcgagccgg gtgtccatcg tggcgccgat ctgggcgacg tgggtggtca
     9121 gcgaattgtc gagcagcgtg gtgcggccga cgagcagctc attgatctca gtggcgcgtc
     9181 cgatgagcga ttccgacagc tcggaggtgc gggtcgaaag cgtgtcgttg agcgcctggg
     9241 tgcggctgtc gagcgcgtcg gcgaggatct gcgagtggcc ttcgagggcg tcggagattt
     9301 cgcgcgagcg gttgccgatg acttcggtga tctgcttgga gcgctgcccc agcgtttcga
     9361 tcatctcgcg ggtgcgctgg ctgacgatgt cgttgaagtg gcccgacttc tcgtcgagcg
     9421 ccatctccag cacattggca cgggcggcga aactggcgtt gtgcttttcg agcgccgaga
     9481 cgagcttttc gcccttgtcg ccgacgacac cgtcgagcgc ctgcaggcgc gtgtcgatga
     9541 ccacggcgat ctcgtcgagg cgggcgtcga actgggtgag gttctgcgag ccggcgccca
     9601 tcagggtgac gcgggcgcgc tcggtggtgt cgtcgagggc gccgctgagc tcgatcatgg
     9661 cggtctggag cttgctctcc atcgaattga cctggatcga gagcgactcg tcgagctgct
     9721 tgctgaggct gcccatcagc gtctcggcct cgcggctgcg ggcctggatg tcggccgaga
     9781 tgcggctgcc gatcatgtcg agcgcggagg agacttcatg gccgcggtcg cgcagctggt
     9841 cgagtagcgt gatgccaccc tggctcagca gcttggcgag cgaggaggta cgattctcga
     9901 tggcttcgga gagggtgacg gcgcggctgt cgagcgcgtc ggtcagcgag gtcatgcgcg
     9961 catcgatgac cgagctcagc tccatcgtgc ggttctcgaa cgcctgcgag atcgtgctgg
    10021 agcggtcctc gagcgtgatg ttgagccggc tggcgctgtc gtcgagagcg ctcagcaggt
    10081 ggctggtgcg ctggtcgatc agggagacga agctctcggt gcgctcgccg aacgcgccgt
    10141 tgagcgagtt gcccgcggtt tcaagcgcct tggtgaggtt gccgccggac tcgacgatgg
    10201 tgccggcgat gcgctggctg atcatgtcga ggtcgaagac gaggccggtg tggctctcgg
    10261 tgatcgcctc gcggacgcgc tcggtgttgg tgatgacggc ttcgcgctgg ctggccagtt
    10321 cctggatcag cgcgcgcatg cgcgattcat tgtcggaata ggtacgctcg agggcggtga
    10381 cctcgttgtg gatcatcacc tccagctcac cggcgcggct cagggcgcgc tcgaggccgt
    10441 cgccgagggc attgacctcg cggcggacgg cctggccgac ggatgcgacc ttttcggacg
    10501 cggtggtctc gggttcggcg aggcgaatgg cggcgtgggt gacggcagtg gcggcgttgc
    10561 gcaggtcctg ggcgcggcgg atcagggtcg agatggcgaa gaagccgagc accggaatga
    10621 cggcgagggc gacgaggccg atgaaatcgt tggacgcaaa gaaggcgccg gtgccgaact
    10681 cgcgaccgtc acgaacgatg gcgacgagga cgatggcgat gacccagccg acggcgatca
    10741 gcgtcgcggc gagggtcggg gtctggctcg atttggactg caggccatag aggatgcg
//
LOCUS       DATAZA010000357         1952 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2594522, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000357 DATAZA010000000
VERSION     DATAZA010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1952
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2594522"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..596)
                     /locus_tag="VHZ56_09045"
     CDS             complement(<1..596)
                     /locus_tag="VHZ56_09045"
                     /inference="COORDINATES: protein motif:HMM:NF039185.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEX4298157.1"
                     /translation="METGLALVKTRIAPPLKWLGGALLDTLYPPLCLSCDAPVASADA
                     LCPACFRRLRPITAPLCPVLGIPFEVSLGPDARSAEAIADPPPFDRARSAVVYNDVAR
                     ALVSRLKYGDRPELARLCGRLMAQAGHEFWGPDAVLVPVPLHRTRQFARRYNQSTELA
                     RALGRFTGVAVDPGLVQRKRKTRQQVGLSGDARQRNVAG"
     gene            632..1495
                     /locus_tag="VHZ56_09050"
     CDS             632..1495
                     /locus_tag="VHZ56_09050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEX4298158.1"
                     /translation="MPAIVLPKVFDHELLSRHLLRRPAGRDDFVTRLVLADLADRLGT
                     VTRQFRQALILSPDPAPLPTTGHSASGPFAFERASSVLQVAGIPLVDPEALELPRRGY
                     DLIVSIFDLDVVDDVPGFLARARAHLGPDGLFLAAAIGGDSLTELREAFLTADAETGG
                     GAFLRVAPFIPLSAAAGLLQRAGLALPVSDVETHVVRYASPLALMRELKALGASNPLA
                     DRPTRLATPRLLAAASTAYQALAADADGRVRATLEIVWMSGWAPHESQQKPLRPGSAE
                     ISLAKVLGSRA"
     gene            complement(1492..1680)
                     /locus_tag="VHZ56_09055"
     CDS             complement(1492..1680)
                     /locus_tag="VHZ56_09055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007600372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEX4298159.1"
                     /translation="MTKILVRFILSDSGATAIEYGLIGMFLGVGLIVAFSTFGSSLVG
                     LFGFVSDRAGNAMGTPTP"
     gene            complement(1698..>1952)
                     /locus_tag="VHZ56_09060"
     CDS             complement(1698..>1952)
                     /locus_tag="VHZ56_09060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX4298160.1"
                     /translation="ALIRELDEELGISTKTACLAPLSFASHSYESFHLLMPLFVCRKW
                     QGTPQPRVHSALKWVRPQALRDYPMPPADGPLIAPLCDLL"
BASE COUNT          290 a          715 c          664 g          283 t
ORIGIN      
        1 ccggccacgt tgcgctgccg cgcatcgccg gaaagcccca cctgctggcg tgtcttgcgc
       61 ttgcgctgca ccagtcccgg atcgaccgcc accccggtga accggccgag cgcccgggcc
      121 agctctgtcg actggttgta gcggcgcgcg aactgtcggg tgcggtgcag cggcactggc
      181 accagcacgg cgtcgggacc ccagaactca tggcccgcct gcgccatcag ccggccgcag
      241 agccgcgcca gctccggccg gtcgccatat ttcaggcggc tgaccagcgc ccgcgcgacg
      301 tcgttgtaga cgacggccga ccgtgcgcga tcgaacggcg gcgggtcggc gatggcttcg
      361 gccgaccggg cgtccggtcc aagcgacacc tcgaacggaa tgcccagcac cgggcagagc
      421 ggcgccgtga tcggccggag ccgccggaaa caggcggggc acaaggcatc cgcgctcgcc
      481 accggcgcgt cgcagctgag gcagagcggc ggatagagcg tgtcgagcag cgccccgccc
      541 agccatttga gcggcggggc gatcctcgtt ttgacaagcg ccagacccgt ctccataacg
      601 gccatcctgc cattgccgag cccttccgcc aatgcccgcc atcgtcctgc cgaaggtctt
      661 cgaccacgaa cttctgtcgc gtcatctcct gcgccggccg gctggccgcg acgatttcgt
      721 cacccggctg gtgctcgccg atcttgccga ccggctcggc accgtcacgc gccagttcag
      781 gcaggcgctg atcctctctc ccgacccggc gccgctgccg acgaccggcc acagcgccag
      841 tggcccgttc gccttcgagc gcgcctcgag cgtgctgcag gtcgcgggca ttccgctggt
      901 cgacccggag gcgctcgagc tgccgcggcg cggctacgac ctcatcgtct cgatcttcga
      961 cctcgacgtc gtcgacgacg tgcccggctt cctcgcccgg gcccgggccc accttggtcc
     1021 cgacggactg ttccttgcgg ccgcgatcgg cggcgacagc cttaccgaac tgcgcgaggc
     1081 gttcctcacc gccgatgccg agaccggcgg cggcgcgttc ctgcgggtcg cccccttcat
     1141 tccgctgagc gcggccgccg gactgctgca gcgcgccggg ctcgccctgc cggtgagcga
     1201 cgtcgagacc cacgtcgtgc gctacgcctc gccgctggcg ctgatgcgcg agctcaaggc
     1261 gctcggcgcc tccaacccgc tcgccgaccg cccgacgcgg ctggcgacgc cacggctgct
     1321 ggcggccgca tcgacggcct accaggcgct ggccgccgat gccgacggcc gcgtccgcgc
     1381 cacgctcgag atcgtctgga tgagtggctg ggcgccgcac gagagccagc agaagcccct
     1441 gcggcccggc agcgccgaga tcagcctcgc caaggtgctg ggcagtcgcg cctagggggt
     1501 gggcgtgccc atggcgttgc cggcccgatc gctgacgaag ccgaacagtc cgacgaggct
     1561 gctgccgaag gtgctgaagg cgacgatgag gccgaccccg aggaacatgc cgatgagccc
     1621 gtattcgatg gcggtcgcgc cgctgtcgct gaggatgaac cgcaccagga tcttcgtcac
     1681 gccgcgcctc cctcagctca gagcagatcg caaagcgggg cgatcagcgg gccgtcggcc
     1741 ggcggcatcg gatagtcgcg aagggcctgc gggcgcaccc atttgagggc ggaatgcaca
     1801 cgcggctgcg gcgtcccctg ccatttccgg cagacgaaaa gtggcatcag aagatgaaag
     1861 ctttcgtaag agtgggacgc aaagcttaac ggcgcgagac aggcagtttt ggttgaaatg
     1921 ccaagctctt cgtcgagttc gcggatcagc gc
//
LOCUS       DATAZA010000358         2914 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3408477, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000358 DATAZA010000000
VERSION     DATAZA010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2914
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3408477"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..481)
                     /locus_tag="VHZ56_09065"
     CDS             complement(<1..481)
                     /locus_tag="VHZ56_09065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HEX4298161.1"
                     /translation="MALQPHNDARAALTAAARERILVLDGAMGTMIQQLKLDEAGYRG
                     ERFKDWTSDVRGNNDLLVLTLPEAIRDIHLQYFLAGADICETNTFSSTSIVQADYGME
                     ALAYELNLAGARLAREAAQLAFERDGKRRFVAGALGPLNKTASMSTDVSNPGARNITF
                     "
     gene            753..1793
                     /locus_tag="VHZ56_09070"
     CDS             753..1793
                     /locus_tag="VHZ56_09070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013531579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEX4298162.1"
                     /translation="MLSTSGWRFAALTLLIAPVLAACAANHGYHRAAFTSKQYGVGVS
                     PRVTTAKYPPHGGGRYLAPTPYVVAGVTYAPVAGPGYDQRGEASWYGMDFHGRLTANG
                     EIFGAYYLTAASPVLPVPSYARVTNLENGRSVLVRINDRGPYMQGRIADVSYETAQVL
                     GFADTGTARVEVSYAGPAPLDGDDSRMLMASLDTVPAVDQGETRIAAADVPKPLPALP
                     ARDRDPLKGGLIGQLITSLGYTDGPNVNAAVAAAAAMASRATALQPWKAEVDDDARRI
                     DLQLGVFADPQQARDIDEQFAALGAVDEEQVDVGGKTATRLTLTHLKPGVARADLVLL
                     ARQLGLDDVVPD"
     gene            1902..>2914
                     /locus_tag="VHZ56_09075"
     CDS             1902..>2914
                     /locus_tag="VHZ56_09075"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HEX4298163.1"
                     /translation="MMRLGLGSILLALLCALGFAVPAAAQDFDTAAKFAILMDYDTGS
                     ILYSKAGDDRLEPASMAKLMTVAVVFTYLQQHKLSLDDEFFISEHAWKDGGAASGSST
                     MFAKVNSKIRVEDLLKGVIVQSGNDAAIALAEGIGGTEQVFARIENQLAGQIGLTNSH
                     FVNATGLPDPDQYSSAHDIAMLARYIIQTFPEYYPIFSMPEFTWNKIKQPNRNSLLEV
                     GIGVDGLKTGHTEESGYGEVVSAPNDGRRLIAVVHGLNSMKQRAEESRKLLTWGMRGF
                     ELLPVFPAGKVVAYASVYGGDKSSVGLIGKGKIDLLVPKGADACPTATVTYKGPLRPP
                     VEQG"
BASE COUNT          493 a          987 c          949 g          485 t
ORIGIN      
        1 cgaaggtgat gttgcgggcg cccggattgc tgacgtcggt cgacatcgaa gcggtcttgt
       61 tgagcggccc cagcgccccg gcgacgaacc gccgcttgcc gtcgcgctcg aaagccaact
      121 gggccgcctc gcgcgccagc cgggcgccgg cgaggttgag ctcataggcc agcgcctcca
      181 tgccgtaatc ggcctggacg atcgaggtcg aggagaaggt attggtctcg cagatgtcgg
      241 cgccggcgag gaagtactgc aggtggatgt cgcggatcgc ctcgggcagc gtgaggacca
      301 gcaggtcgtt gttgccgcgg acgtcgctgg tccagtcctt gaagcgctcg ccgcggtagc
      361 cggcttcgtc cagcttgagt tgctggatca tggtccccat ggcgccatcg agcaccagga
      421 tgcgctcgcg ggcagccgcc gtcagggcgg cgcgcgcgtc gttgtggggc tgcagcgcca
      481 tgaaacaaat cctctcgcgg gtcgaccgcg ccgaaacact acggactggg atataaagat
      541 atctttatat gattgccaga ggccggacaa gccaaggctt tttgcgatcc gtcccagcca
      601 gggaaaaggc gttcacatcc ctggttggac acccggccac atccctcaaa tgcgattcaa
      661 attaacgcca tcgcaaccac gatcaggttg tttccgcctg tggcccggcg gctcttgtaa
      721 aatgccgggc ggaaggcctt ggggtgtgcg ttgtgttgag tacgagcggc tggcgctttg
      781 cggcgctgac actgctgatc gcccccgtgc tcgccgcctg cgccgccaat cacggctatc
      841 accgcgccgc cttcacctcg aagcaatacg gcgtcggcgt ctcgccgcgc gtcaccacgg
      901 ccaaataccc gccccatggc ggcggtcgct acctcgcgcc gacgccctac gtcgtcgccg
      961 gcgtgaccta cgcgccggtc gccggtcccg gctacgacca gcgcggcgag gcgtcgtggt
     1021 acggcatgga tttccacggc cggctgaccg ccaatggcga gatcttcggc gcctactatc
     1081 tcaccgcggc gagccccgtg ctcccggtgc cgagctacgc gcgcgtcacc aacctcgaga
     1141 atggccgctc ggtgctggtc cgcatcaacg accgcggccc ctacatgcag gggcggatcg
     1201 ccgacgtctc ctacgaaacc gcccaggtgc tgggatttgc cgataccggc accgcccgtg
     1261 tcgaggtcag ctacgccggt ccggcgccgc tcgatggcga cgacagccgc atgctgatgg
     1321 cctcgctcga caccgtgccc gccgtcgacc agggcgaaac gcgcattgcg gcggctgatg
     1381 tgcccaagcc gcttccggca ttgccggcgc gcgaccgcga tccgctcaag ggcggactga
     1441 tcggccagct catcacctcg ctcggctaca ccgacgggcc gaacgtcaac gcggcggtcg
     1501 ccgccgcagc cgccatggcc agccgcgcca ccgcgctgca gccgtggaag gccgaggtcg
     1561 acgacgacgc gcgccggatc gacctgcagc tgggcgtctt cgccgatccg cagcaggccc
     1621 gcgatatcga cgagcaattc gcggcgctcg gcgccgtcga tgaggagcag gtcgatgtcg
     1681 gtggcaaaac ggccacacga ttgacactga cccatcttaa gcccggggtc gcgcgggccg
     1741 atctggtgtt gctggcccgg cagctcggcc ttgacgatgt cgttcccgac tagaacccgc
     1801 tccatcgatt gacccaccgg cgaggcgaaa atggtgagac ttttccgcgc cggacgtgca
     1861 acgatggccg gactcgcgcg gcggcggtgc aacgggttgg aatgatgcga cttggcctgg
     1921 gctcgatcct gctggcgctg ctgtgcgcgc ttggcttcgc cgtgcccgcc gcggcccagg
     1981 atttcgacac cgcggcaaag ttcgccatcc tgatggacta cgacaccggc tccatcctct
     2041 acagcaaggc gggcgacgac cggctcgagc cggccagcat ggccaagctg atgaccgtgg
     2101 cggtcgtctt cacctacctg cagcagcaca agctttcgct cgacgacgag ttcttcattt
     2161 ccgagcacgc ctggaaggat ggcggtgccg cttcgggcag ctcgaccatg ttcgccaagg
     2221 tcaattccaa gatacgcgtc gaggacctgc tcaagggcgt aatcgtgcag tcgggcaacg
     2281 acgccgcgat cgcgcttgcc gaaggcatcg gcggcaccga gcaggttttc gcccgcatcg
     2341 agaaccagct ggcggggcag atcgggctga ccaactcgca tttcgtcaac gccacgggcc
     2401 tgcccgaccc cgaccagtat tcctccgccc acgatatcgc gatgctggcg cgctacatca
     2461 tccagacctt cccggaatat tatccgatct tctcgatgcc ggagttcacc tggaacaaga
     2521 tcaagcagcc caaccgcaat tcgctgctgg aagtcggcat cggcgtggat gggctgaaga
     2581 ccggccacac cgaggagtcg ggctatggcg aggtggtctc ggcgcccaat gacggtcgcc
     2641 ggctcatcgc cgtcgtgcat ggcctcaact cgatgaagca gcgcgccgag gaatcgcgca
     2701 agctgctgac ctgggggatg cgcggcttcg agctgctgcc ggtattcccg gccggcaagg
     2761 tggtggccta cgccagcgtc tatggcggcg acaaatcgag cgtcgggctg atcggcaagg
     2821 gcaagatcga tctcctcgtc cccaagggcg ccgacgcctg tccgacggcg accgtgacct
     2881 acaagggccc gctccggccg ccggtcgagc aggg
//
LOCUS       DATAZA010000359         7524 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2943825, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000359 DATAZA010000000
VERSION     DATAZA010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 7524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7524
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2943825"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(33..824)
                     /locus_tag="VHZ56_09080"
     CDS             complement(33..824)
                     /locus_tag="VHZ56_09080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006933145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEX4298164.1"
                     /translation="MDTATAELAADASKMSVSKTEVAIEIIGMHKWYADFHVLRDINL
                     KVMKGERIVIAGPSGSGKSTLIRCINRLEEHQKGQIIVDGVELTSDLKRVDEVRREVG
                     MVFQHFNLFPHLTIMQNLTLAPIWVRGIPKAKAEETAMHYLERVKIPEQAGKYPGQLS
                     GGQQQRVAIARALCMSPKIMLFDEPTSALDPEMVKEVLDTMVGLAQDGMTMLCVTHEM
                     GFAREVANRIVFMDFGQIVEVNEPAAFFANPQHERTKLFLSQILH"
     gene            complement(870..1886)
                     /locus_tag="VHZ56_09085"
     CDS             complement(870..1886)
                     /locus_tag="VHZ56_09085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX4298165.1"
                     /translation="MKTAILALAALAALGPAAGAARADTLADVKAKGFVQCGVAPSTP
                     GFALPDADNSWSGMDVDYCRAMAAAIFNNADAVRYTPLSTEERFTALSGKQVDVLSRT
                     STWTMGRDTSLGITFVGATYYDGQGFMVRKADNITSASQLSGSTICIEKDTTTELNAE
                     DYFSSHDIDYKPLEFDTEDETVKAFVDGRCNVFSSDASALAGERSLFSNPDDYIILPE
                     IISKEPLGPAVRQGDPVWFNISRWTYFALLDAEELGVTSKNVDEMLGSDNAEIKRLLG
                     VEDDFGSPIGLDKDWAYRIVKLVGNYAEIFNRDVGPDSPLKLPRGLNALWKDGGIQYA
                     PPIR"
     gene            2062..3246
                     /gene="metC"
                     /locus_tag="VHZ56_09090"
     CDS             2062..3246
                     /gene="metC"
                     /locus_tag="VHZ56_09090"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018408254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004121 - cystathionine beta-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HEX4298166.1"
                     /translation="MAETSDHSKKPLSPETVLTHAGRHPGADRGYVNTPVYRGSTILF
                     PTLDDLESPGPRYDYGRTGNPSSAAVEQIVSALEGAAITVLAPSGLSAISLALLTVLG
                     SGDELLMTDSAYQPTRRVSDGVLARMGVSVRYHDPRTGGGIASLITDKTRAIFVESPG
                     SLTFEIEDLPAIVAAARPRDIAIIVDNSWATPLFHRPLALGADIVVHAATKMFVGHSD
                     TMLGTASANDKWRDRLRDTHLRLGLCASPDDCFLAARGLRTLALRMREHSAHSTEIAA
                     WLETRPGVRRVLHPALPSHPDHALFTRDFTGAGSVFAAVLEPKPRSALAAMVDGFELF
                     GMGWSWGGYESLCLPIHPEKTRTATPWTEAGPMLRLHIGLEGVDDLKADLDAALARYA
                     AA"
     gene            complement(3200..3973)
                     /locus_tag="VHZ56_09095"
     CDS             complement(3200..3973)
                     /locus_tag="VHZ56_09095"
                     /inference="COORDINATES: protein motif:HMM:NF025736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEX4298167.1"
                     /translation="MDDLSSTWPAGLGGRRWWLAAGGAIALLLVLLPFDRALSLWAQG
                     WPPAIREPLAAVTRYGESDWILYPAAALFVVTVPLALLSPWRLMRLMLWQFAGLYAFI
                     FLAVGVPNLFTLIVKRIIGRGRPEHFEQTGLLGLRPNWLDWSYQSFPSNHTTTAVALA
                     VAIGFLAFRWFPIGVVFAIAIGVSRLSLGVHYPTDVVAGAMVGTVGAYAVRWGFARRG
                     WVFREAPAGHIVVRPMSSMQRYLSLMRRRIGPGRRPDRP"
     gene            4063..4139
                     /locus_tag="VHZ56_09100"
     tRNA            4063..4139
                     /locus_tag="VHZ56_09100"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4097..4099,aa:Pro,seq:tgg)
     gene            4157..4462
                     /locus_tag="VHZ56_09105"
     CDS             4157..4462
                     /locus_tag="VHZ56_09105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009450211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ETC complex I subunit"
                     /protein_id="HEX4298168.1"
                     /translation="MTARIYRPSPNAMQSGKGTSKNWVLVHEPSGTREIDPLMGYTST
                     TDTLAQVRLSFETLEEAETYARTNGIPYTVQLPHASAPKRSSYPDNFRSDRKTPWTH"
     gene            4465..5391
                     /locus_tag="VHZ56_09110"
     CDS             4465..5391
                     /locus_tag="VHZ56_09110"
                     /inference="COORDINATES: protein motif:HMM:NF014066.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraB/GumN family protein"
                     /protein_id="HEX4298169.1"
                     /translation="MSTRRRAAIATALPRGIGAIATALLGLVVLAAFASPAQAAPAMW
                     EVSDGTHKVVLFGSVHVLPVGTQWRTPAFDAALAAAPEVYFETDIGPLGVLALTAKMV
                     VLGFQSAGTSWVGQLTPAQLAELKPALAAIGMTPGQADRFPPWVAELQIAQGTITGGK
                     TGAAAPGPGVDAQLQTELPKQRKAFFETPGQDFDLLAGDPLSVQIAQLFQTIESGQPT
                     AATGLDAVVSAWAAGDVADIATTLKSTDPQDIAREQRLLFDRNRNWVPIIEGMLKAGD
                     QDLIVVGAAHLAGDGSVLDLLGQAGYTVTRVQ"
     gene            5400..5585
                     /locus_tag="VHZ56_09115"
     CDS             5400..5585
                     /locus_tag="VHZ56_09115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298170.1"
                     /translation="MSVSSELSRLKRDIDSLAEEIAVNTGPKARAPLTAAERRGLKAE
                     MQGLIQRLDELATRLSG"
     gene            complement(5596..6747)
                     /locus_tag="VHZ56_09120"
     CDS             complement(5596..6747)
                     /locus_tag="VHZ56_09120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4298171.1"
                     /translation="MAENGQRRIRLGMVGGGTGAFIGYVHRIASRLDGDYELVAGALS
                     SRPDVARESGKNVGLAPDRIYTSYEEMAATESKRPDGIEAVSIVTPNNVHFGAAKVFL
                     EAGIHVICDKPLTSTLADARALAAVKPAKGAKFLLTHNYTGYPLVRQARELVKSGALG
                     KLRVVQVEYPQDWLSTPADPSNKQAAWRTDPKRSGAGGAIGDIGTHAYNLARFVTGLK
                     TEAVSADLQSFVKGRKVDDNVNIMLRFAGGARGMLWASQVAPGNENGLQLRVYGEKAG
                     LSWRQDNPNYMWFSELGKPAQLLTRGGAISQPPAASMNIRIPGGHPEGYLEAFATLYS
                     QFAAVIRGEGKAYAGLLPTLADGVEGVEFITASIASSKADGKWTRLSDV"
     gene            complement(6778..>7524)
                     /locus_tag="VHZ56_09125"
     CDS             complement(6778..>7524)
                     /locus_tag="VHZ56_09125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017989458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HEX4298172.1"
                     /translation="EVHGKPKARQEWAVKTMMNAAKASKNLGLTAHATFSGALAWPYL
                     YPWPQRPAGLVEEAFDELARRWTPILDEFDRNGVDVCYEIHPGEDLHDGVTYEMFLER
                     VKNHKRANLLYDPSHFVLQQLDYLDYIDIYHERIRMFHVKDAEFNPTGRQGVYGGYQS
                     WVDRAGRFRSLGDGQVDFAAIFSKLSQYGFDGWAVLEWECAIKSAEQGAAEGAPFIES
                     HIIRVTEKAFDDFAASGTDTAANRKMLGLS"
BASE COUNT         1176 a         2785 c         2327 g         1236 t
ORIGIN      
        1 agcagcgcgc ggcgatattt catgtcggcc cctcagtgca ggatctggct caggaacaac
       61 ttggtccgct catgctgagg attggcgaag aacgcggcag gctcgttcac ctcaacgatc
      121 tggccgaagt ccatgaatac gatgcggttg gcgacctcgc gggcaaaacc catctcgtgg
      181 gtcacgcaca gcatggtcat gccgtcctgg gcgagcccga ccatggtgtc gagcacctcc
      241 ttgaccattt ccgggtcgag cgccgaggtc ggctcgtcga acagcatgat cttcgggctc
      301 atgcatagcg cgcgggcgat ggcgacgcgc tgctgctggc cgccggacag ttgccccgga
      361 tacttgccgg cctgctcggg gatcttcacc cgctcgagat aatgcatcgc cgtttcctcg
      421 gccttcgcct tggggatgcc gcgcacccag atcggcgcca gcgtcaaatt ctgcatgatc
      481 gtcaggtgcg gaaacaggtt gaagtgctgg aacaccatcc cgacctcgcg ccgcacctcg
      541 tcgacgcgct tcaggtccga ggtgagttcc accccgtcga cgatgatctg gcccttctgg
      601 tgctcctcca gccggttgat gcagcggatc agcgtcgact tccccgagcc cgacggcccg
      661 gcgatgacga tgcgctcgcc cttcatcacc ttgaggttga tgtcccgcag cacgtggaaa
      721 tcggcgtacc atttgtgcat gccgatgatc tcgatggcga cctcggtctt gctgaccgac
      781 atcttcgagg cgtcggcggc gagctcggcg gtggcggtgt ccatgctcat ctgttgcgtt
      841 cctgtgatcg aaatgtccgt gcctggtcgc tagcggatcg gcggagcata ctggatgccg
      901 ccgtccttcc acagcgcgtt cagcccgcgc ggcagtttca gcggcgaatc cgggccgacg
      961 tcccggttga agatttcggc gtagttgccg accagcttga cgatccggta cgcccagtcc
     1021 ttgtcgaggc cgatcgggct gccgaaatcg tcctcgacgc cgagcaggcg cttgatctcg
     1081 gcattgtccg agccgagcat ctcgtcgacg ttcttgctcg tgacccccag ctcctcggca
     1141 tcgagcagcg cgaaataggt ccagcgcgag atgttgaacc acaccggatc gccctgccgc
     1201 acggccggcc ccagcggctc cttcgagatg atctcgggca ggatgatgta gtcgtcggga
     1261 ttgctgaaca gcgagcgctc gccggccagc gccgaggcgt ccgagctgaa cacgttgcac
     1321 cgcccgtcga cgaacgcctt gaccgtctcg tcctcggtgt cgaattcgag cggcttgtag
     1381 tcgatgtcgt gcgaggagaa atagtcttcg gcattgagct cggtcgtcgt gtccttctcg
     1441 atgcagatgg tcgagcccga gagctggctc gccgacgtga tgttgtcggc cttgcgcacc
     1501 atgaagccct gcccgtcata ataggtggcg ccgacgaagg tgatgcccag cgaggtatcg
     1561 cggcccatcg tccaggtgct cgtccgcgac agcacgtcga cctgcttgcc cgagagcgcg
     1621 gtgaaccgct cctccgtgct gagcggcgtg tagcggacgg cgtcggcatt gttgaagatc
     1681 gccgccgcca ttgcccggca gtagtcgacg tccatcccgc tccagctgtt gtcggcgtcc
     1741 ggcagggcga agcccggcgt gctcggcgcc actccgcact gcacgaagcc cttggccttg
     1801 acgtcggcga gcgtgtcggc gcgcgccgcg ccggccgccg gtccgagcgc cgccagcgct
     1861 gccaaggcaa ggatcgccgt cttcatcgag gcctgcgtgt ccgctccgtt cgccccgcct
     1921 ttcatggcgg cggggatgct ggtaggtatc gaaccggcaa ttgacggttg cgtcaaggcg
     1981 cacgcccgaa ttgccgcatt gcccccaccg atgggtgtcc tgcccgccgg ccccttccct
     2041 cccgaggtat cgccgacgcg catggccgaa accagcgatc attcgaaaaa gccgctcagc
     2101 cccgagaccg tcctgaccca cgcgggccgc caccccgggg ccgaccgcgg ctacgtcaac
     2161 accccggtct atcgcggctc gaccatcctg tttccgaccc tcgacgacct cgaaagcccg
     2221 gggccgcgct acgactacgg ccgcaccggc aatccttcct ccgctgccgt cgagcagatc
     2281 gtcagcgccc tcgaaggcgc cgccatcacc gtcctcgccc cgtcggggct gtcggcgatc
     2341 tcgctggccc tgctcaccgt gctcggctcc ggcgacgagc tgctgatgac cgacagcgcc
     2401 taccagccga cgcgccgcgt ttccgacggc gtcctcgccc gcatgggcgt cagcgtccgc
     2461 tatcacgatc cccgcaccgg cggcggcatc gcctcgctca tcaccgacaa gacccgcgcg
     2521 attttcgtcg aaagccccgg ttcgctgacg ttcgagatcg aggacctgcc ggcaatcgtc
     2581 gccgccgccc ggccgcgcga catcgccatc atcgtcgaca attcctgggc cacgccgctg
     2641 ttccaccggc cgctcgccct cggcgccgac atcgtcgtcc atgccgcgac caagatgttc
     2701 gttggccact ccgacaccat gctcggcacc gcctccgcca acgacaaatg gcgcgaccgg
     2761 ctgcgagaca cgcatctgcg cctcggcctc tgcgcgtcgc cggacgactg cttcctcgcc
     2821 gcccggggtc tacggacgct ggccctccgc atgcgcgagc acagcgccca ctcgaccgaa
     2881 atcgccgcct ggctcgaaac ccggccgggc gtccggcgcg tcctccatcc ggcgctccca
     2941 agccaccccg atcacgccct cttcacccgc gacttcaccg gcgccggcag tgttttcgcg
     3001 gcggtgctcg aaccgaagcc gcgcagtgcg ctggcggcca tggtcgacgg cttcgagctc
     3061 ttcggcatgg gctggtcctg gggcggctac gagagcctct gcctgcccat ccatcccgaa
     3121 aagacccgga ccgcgacgcc gtggaccgag gccggcccca tgctccggct ccacatcggg
     3181 ctcgagggcg tcgacgacct caaggccgat ctggacgccg ccctggcccg atacgccgcc
     3241 gcatgagcga caggtagcgc tgcatggaac tcatcggccg gaccacgatg tggcccgccg
     3301 gcgcttcccg gaacacccag ccgcgccgcg caaatcccca gcgcaccgca tatgccccga
     3361 ccgtccccac catcgcgccg gccaccacgt cggtgggata atgcaccccg aggctcagcc
     3421 gcgagacccc gatcgcgatg gcgaacacca cgccgatggg aaaccagcgg aacgcaagga
     3481 agccgatcgc cacggcaagc gcgacggccg tcgtcgtatg gttcgaggga aagctctggt
     3541 agctccagtc gagccagttg ggcctgaggc caaggagccc ggtctgctcg aagtgctcgg
     3601 gccgcccccg tccgatgatc cgcttgacga tgagcgtaaa gaggttcggc accccgacgg
     3661 cgaggaagat gaacgcgtag agcccggcga actgccacag catgagccgc atcagccgcc
     3721 acggcgagag cagcgccagc ggcaccgtca cgacgaacag cgccgccgcc ggatagagga
     3781 tccagtccga ttcgccgtac cgggtgaccg ccgcgagcgg ctcgcggatc gccggcggcc
     3841 agccctgcgc ccacagcgac agcgcccggt cgaagggcag cagcaccagc agcagcgcga
     3901 tcgccccgcc ggccgccagc caccagcgcc ggccgcccag tcccgccggc catgtgctcg
     3961 aaagatcgtc cattaccgac cgttccgctg tttcgcgtca gccgggatcg cccgcggcct
     4021 tgcccttttc gggcgtctcc ggtaacggat caaggcgaaa tacggggtat agctcagcct
     4081 ggtagagcac cggttttggg aaccgggggt cgagtgttcg aatcactttg ccccgaccac
     4141 ttcctcgagg acagcgatga cggcacgcat ctatcggcca tcccccaacg ccatgcagtc
     4201 gggcaagggc acgtcgaaga actgggtgct ggtccacgaa ccctcgggca cgcgcgagat
     4261 cgacccgctg atggggtaca cctcgaccac cgacacgctg gcgcaggtcc gcctctcctt
     4321 cgagaccctc gaggaggccg aaacctacgc gcggacgaac ggcatcccct acaccgtgca
     4381 gctgccgcat gcctcggcgc ccaagcgctc gagctacccc gacaatttcc gctccgatcg
     4441 caagacgccc tggacgcatt gaccgtgtcg acgcgccgcc gggcggcgat cgcgaccgcc
     4501 ctgccccgtg gcatcggcgc catcgcgact gcccttctcg gcctcgtcgt ccttgcggcc
     4561 ttcgccagtc ccgcgcaggc agcgccggcg atgtgggagg tcagcgacgg cacccacaag
     4621 gtcgtgctgt tcggctcggt ccacgtgctc cccgtcggca cgcaatggcg cacgcccgcc
     4681 ttcgacgccg ccctcgccgc cgcacccgaa gtctatttcg agaccgacat cggcccgctc
     4741 ggcgtcctgg cgctgaccgc caagatggtc gtcctcggct tccagagcgc cggcacctcc
     4801 tgggtcggcc agctcacccc cgcccagctc gccgagctca agccggcgct cgcggcgatc
     4861 ggcatgacgc cggggcaggc cgaccgcttt ccgccctggg tggccgagtt gcagatcgcc
     4921 cagggcacca tcaccggcgg caagaccggc gccgccgccc cgggcccggg cgtcgatgcg
     4981 cagttgcaga cggagttgcc caagcagcgc aaggccttct tcgagacacc cggccaggac
     5041 ttcgacctgc tcgccggcga tccgctgagc gtgcagatcg cccagctgtt ccagaccatc
     5101 gaaagcggcc agccgaccgc cgcgaccggc ctcgacgccg tggtcagcgc ctgggccgcc
     5161 ggcgacgtcg ccgacatcgc cacgaccctc aagagcaccg atccccagga catcgcccgc
     5221 gagcagcgcc tgctgttcga ccgcaatcgc aactgggtcc cgatcatcga gggcatgctc
     5281 aaggccggcg accaggatct gatcgtggtc ggcgccgcgc acctcgccgg cgacggcagc
     5341 gtgctcgatc tgctcggcca ggcgggctac accgtcaccc gcgtgcaata ggatcgccga
     5401 tgtccgtttc gtccgaactg agccgcctca agcgcgacat cgactcgctg gccgaagaga
     5461 tcgccgtcaa caccggcccc aaggcccgcg ccccgttgac cgccgccgag cgccgcgggc
     5521 tcaaggccga gatgcagggc ctgatccagc ggctggacga gctggcgacg cggctgagcg
     5581 gctagcgccg ccccttcaca cgtcgctgag cctggtccac ttgccatcgg ccttgctgga
     5641 ggcgatcgag gcggtgatga actcgacccc ttcgaccccg tccgccagcg tcggcagcag
     5701 cccggcatag gccttgccct cgccccggat cacggcagcg aactggctgt agagcgtcgc
     5761 gaacgcctcg agatagccct ccgggtgccc gcccgggatg cggatgttca tcgacgccgc
     5821 cggcggctgg ctgatcgccc cgccgcgcgt cagcagctgc gccggcttgc ccagttcgct
     5881 gaaccacatg tagttcggat tgtcctgccg ccagctgagc ccggccttct cgccatagac
     5941 cctgagctgc agcccgttct cgttgcccgg cgccacctgg ctggcccaca gcatgccgcg
     6001 cgccccgccc gcaaagcgca gcatgatgtt gacgttgtcg tcgaccttgc ggcccttgac
     6061 gaagctctgc aggtcggcgc tcaccgcctc ggtcttgagc ccggtgacga accgcgccag
     6121 gttgtaggcg tgggtgccga tgtcgccgat cgccccgccc gcgcccgagc gcttcggatc
     6181 ggtccgccat gccgcctgct tgttggatgg atcggccggc gtcgacagcc agtcctgcgg
     6241 atactccacc tgcaccaccc gcagcttgcc gagcgccccg gatttcacca gctcgcgcgc
     6301 ctgccgcacc agcggatagc cggtgtaatt gtgcgtcagc aggaacttcg cgcccttcgc
     6361 cggcttcacc gccgccagcg cccgggcatc ggccagcgtc gaggtcagcg gcttgtcgca
     6421 gatgacgtgg atgccggcct cgaggaacac cttggccgcc ccgaaatgca cgttgttggg
     6481 cgtcacgatc gacaccgcct cgatgccgtc gggccgcttg ctctccgtcg ccgccatctc
     6541 ctcgtacgag gtatagatgc ggtccggcgc cagcccgaca ttcttgcccg attcccgcgc
     6601 cacgtccggt cgcgacgaca gcgcccccgc caccagctcg tagtcgccat cgagccgcga
     6661 ggcgatacga tgcacatagc cgatgaaggc gcccgtgccg ccgcccacca tgccaagccg
     6721 aatccgccgc tgtccgttct cagccattgc cgtgtccctg tcctgtcgtt gtcgcgctca
     6781 gctcagcccg agcatcttgc ggttggccgc cgtgtcggtg ccgctggcgg cgaaatcgtc
     6841 gaacgccttc tcggtcaccc tgatgatgtg gctctcgatg aacggcgcgc cctcggccgc
     6901 gccctgctcc gccgacttga tggcgcactc ccattcgagc accgcccaac cgtcgaagcc
     6961 gtactggctg agcttcgaga agatcgccgc gaaatccacc tgcccgtcac ccagcgaccg
     7021 gaaccgcccg gcccggtcca cccagctctg gtagccgcca tagacgccct gccgcccggt
     7081 cggattgaac tcggcgtcct tgacgtggaa catccggatt cgctcgtggt agatgtcgat
     7141 gtagtcgaga taatccagct gctgcaggac gaagtggctc ggatcgtaga gcaggttcgc
     7201 ccgcttgtgg ttctttaccc gctcgaggaa catctcgtag gtgaccccgt cgtgcaggtc
     7261 ctcgcccgga tggatttcgt agcagacgtc caccccgttg cggtcgaact cgtcgaggat
     7321 cggcgtccag cgccgcgcca gttcgtcgaa cgcttcctcg accagccccg ccggccgctg
     7381 cggccacgga tagagatacg gccacgccag cgcgcccgag aacgtcgcgt gtgccgtgag
     7441 ccccagattc tttgacgcct tggcggcgtt catcatggtc ttcaccgccc actcctgccg
     7501 cgccttcggc ttgccgtgga cttc
//
LOCUS       DATAZA010000360         7211 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_390842, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000360 DATAZA010000000
VERSION     DATAZA010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 7211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7211
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390842"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..582
                     /locus_tag="VHZ56_09130"
     CDS             <1..582
                     /locus_tag="VHZ56_09130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HEX4298173.1"
                     /translation="ELAWLDFRGGRPKRQGRMAASIRSWQSLPVGVVSIAERFGGVDV
                     TPETFEAMVSLVAVQLRDFRGRGKLKQMIAEHPVHLIGTSGTVTTLAGLHLGLERYER
                     QKVDGLWMQRAEVDATMAALLAMPFDRRVSHPCIGRDRADLVLPGCAIFEAIRREWPT
                     ERVRVADRGLREGILISLIDADRDGRRTGPGRR"
     gene            582..1289
                     /locus_tag="VHZ56_09135"
     CDS             582..1289
                     /locus_tag="VHZ56_09135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008125416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HEX4298174.1"
                     /translation="MVKTTNMGGGTGRRSERDLKVRVKTSKGRKIGSTLWLQRQLNDP
                     YVARAKAEGLRSRAAYKLIEINERYKLLHKGQRVVDLGAAPGGWSHVAAGIVGSTAAN
                     PLVVGIDFLEMDPIEGVVFLKKDFTDDDAPQLLRDALGGHKPDLVLSDMAAPTTGHRP
                     TDHIRIMALVEIAADFAVEVLAPGGTFVAKVFQGGTEHELLALLKRHFTTTLHAKPPA
                     SRSESAETYLVARGFRG"
     gene            complement(1302..2714)
                     /locus_tag="VHZ56_09140"
     CDS             complement(1302..2714)
                     /locus_tag="VHZ56_09140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019857570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4298175.1"
                     /translation="MTNRLVPLILAVALFMENMDSTVIATSLAAIAHDIGSEPIALKL
                     ALTAYLVALAIFIPISAWMADRWGARNVFRAAIVIFILGSLACAASDSLWTFVVSRFL
                     QGFGGALMTPVARLVLVRTTPRNQLVDAMAWLSIPGLVGPIVGPPIGGFITTYLSWHW
                     IFLINVPIGLLGIGLVSWLLPDWHRNLPRRIDFPGFFLSGLAFAGWVFGISVLTLPAL
                     PLAFGYVALIGGTVSWLGYLWHFRRTEYPILDLRLFRFPLFRTTVIAGTFFRLGTGAM
                     PFLFPLMLQLAFGMTPFQSGTVTFATAVGAFGAKFVSEPILRVFGFRLSLVVATFITV
                     LGVYAMGVYGPTTPMAVMMSLLVVTGFFQSVFWTATNAFTFADIDDRDAGQATAISQV
                     AIQLSLAFGVALGGGVLEGVRLTHGGDPVLGDFHVAFYVIATVALVSTAIFFRLPRTA
                     GAHLIGHGHAMAKAEVHAGE"
     gene            complement(2767..4155)
                     /locus_tag="VHZ56_09145"
     CDS             complement(2767..4155)
                     /locus_tag="VHZ56_09145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013532287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEX4298176.1"
                     /translation="MILAVALFMENMDSTVIATSLPAIATDIHSSPIALKLALTSYFV
                     SLAVFIPISGWMADRFGSSNIFRIAIGVFVVGSICCAFSNSLPTFVVSRFLQGIGGSM
                     MTPVARLVLLRATPRNELVSAMAWLTVPALIGPLTGPPIGGFLTTYLSWHWIFWINVP
                     IGVIGILLATRFLPPPEPRTPRPIDVIGFFLTTIGFSGMIFGLSVISLPAIPTVIGYA
                     TVAVGAVSLGLYYWHTKRTQFPLLDPKLFRNRVFRTAVVGGTFFRIGIGAFPFLMPLM
                     LQLMFGLTPFESGLTTFVAAFGAIISKFGATRLYARFGFPRVLAVTSLLGCFFLAING
                     LFTPDTNHYFLMFCLFIGGLTRSFFFTGVNTFGYADVSEADASQATSIAAVVQQISVA
                     LGVSVAGGVLEITTQVRNAPLDLMDFHIAWYVVAALAAISAVQFFRLPPDAGANVSGH
                     RLKPLPKAEAVA"
     gene            4347..5627
                     /locus_tag="VHZ56_09150"
     CDS             4347..5627
                     /locus_tag="VHZ56_09150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298177.1"
                     /translation="MKSFSASSFASDHAIALDLAAQAVRDDPHALFTNFQWFLYAGRD
                     TVFFTAFSRSRFTKEMVEGLVEQMVGLAPQLTHGFEGARPGHPFTRHLLDAITSIEEV
                     DSFDGYPDKWLGSSQDVFDQPDLPLFRVMAANLRDGADEQGRVSIIQVRSAHCLMEGS
                     DAALLTRSQTANHGIQSNHGNRLGWLERFRGALSGFAMATLFAGAGNLVNAPDRPLSF
                     KTLALSRHRVRKLANKFHIRQRSLYFALVTYALHSEKDRRVKEKVITAAYTMLDTKRT
                     ASDDDFFRVRALQAAFPFEADFVSYARAVDAEMGTGEQKDLSKFQLTILSMMAALRRL
                     GKVFPWMINDKVWRFQGSQMDLVLTLVPPHRSMGPLTEWMIEPIYCGAFHQSTNICTF
                     CPGREFMTLNFVVEERHLSRIPRVEQLLAELEAA"
     gene            5736..>7211
                     /gene="guaB"
                     /locus_tag="VHZ56_09155"
     CDS             5736..>7211
                     /gene="guaB"
                     /locus_tag="VHZ56_09155"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003527200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEX4298178.1"
                     /translation="MAKIVSSITGDAALTFDDVLLQPARSDVLPTEVSIASRVTRDIE
                     LNLPILSAAMDTVTEHQMAIAMAQAGGIGVIHRNLEPAEQAEQVRQVKSFESGMVVNP
                     ITIGPDATLADALALMRANRISGIPVVANGGQGGRITGRLVGILTNRDVRFATNERQK
                     IAELMTHENLVTVRDGVGRDEAKRLLHANRIEKLLVLDDAGNLIGLVTVKDIEKAQLN
                     PMAIKDAQGRLRVAAASTVGDKGYERSMALIEAGVDLLVIDTAHGHSVRVAEAVERVK
                     RESNSTRIVAGNVATAEATRALIDAGADSIKVGIGPGSICTTRIVAGVGVPQLAAVMA
                     CAEEADKNGVPVIADGGIKFSGDLAKALAGGASCAMIGSLLAGTDESPGEVYLYQGRS
                     YKAYRGMGSVGAMARGSADRYFQQEVRDALKLVPEGIEGQVPYKGPAGNVLHQLAGGL
                     RAAMGYTGAHDLQDFRDNATFVKISGAALSESHVHDVTITRE"
BASE COUNT         1345 a         2426 c         2385 g         1055 t
ORIGIN      
        1 gaactggcgt ggctcgattt ccgcggcggc cggccgaagc ggcagggccg catggccgcc
       61 tccatccgct cgtggcagtc attgcccgtg ggcgttgtgt cgatcgccga gcgcttcggc
      121 ggcgtcgacg tcacccccga gaccttcgag gcgatggtga gcttagttgc cgtccagctg
      181 cgcgacttcc gcggccgcgg caagctcaag cagatgatcg ccgagcaccc ggtgcacctg
      241 atcggcacct ccggcacggt gacgacgctc gccgggctcc acctcgggct cgagcgctac
      301 gagcgccaga aggtcgacgg cctgtggatg cagcgcgccg aggtggatgc gaccatggcg
      361 gcgctgctcg ccatgccgtt cgaccgccgc gtcagccatc cctgcatcgg ccgcgatcgc
      421 gccgacctcg tgctgcccgg ctgcgccatc ttcgaggcga tccgtcgcga gtggcccacc
      481 gagcgcgtgc gcgtcgccga ccgcgggctg cgcgagggca tcctgatctc gctgatcgac
      541 gccgaccgcg acggccggcg caccggcccg ggacggcgct gatggtcaag accaccaaca
      601 tgggcggcgg caccggccgg cgttccgagc gcgacctgaa ggtccgcgtc aagacctcca
      661 agggccgtaa gatcggctcg accctgtggc tgcagcgcca gctcaacgat ccctacgtcg
      721 cccgcgccaa ggccgagggc ctgcgctcac gggcggccta caagctcatc gagatcaacg
      781 agcgctacaa gctgctgcat aagggccagc gcgtggtcga ccttggcgca gcgccgggcg
      841 gctggagcca cgtggccgcc ggcatcgtcg gttcgaccgc cgccaatccc ttggtcgtcg
      901 gcatcgactt cctggaaatg gacccgatcg agggcgtcgt attcctgaag aaggacttca
      961 ccgacgacga cgcgccgcag ctgctgcggg atgcgctcgg cggccacaag cccgatctcg
     1021 tgctgtccga catggcagcg cccaccaccg gccaccgccc gaccgaccac atccgcatca
     1081 tggcgctggt cgagatcgcc gccgatttcg cggtagaggt cctggctccg ggaggcacct
     1141 tcgtcgcgaa ggtgttccag ggcggcaccg agcacgaatt gctggccctg ctgaaacgcc
     1201 attttaccac gaccctccac gccaagcccc cggcctcgcg cagcgaaagt gccgagacct
     1261 acctcgtggc gaggggcttt cgcggctagc cgcgcgctcg gctattcgcc ggcatgtacc
     1321 tcggccttgg ccatcgcgtg gccgtgcccg atgaggtgcg ccccggcggt ccggggaagc
     1381 cggaagaaga tcgcggtcga caccagcgcc acggtggcga tgacatagaa cgcgacgtgg
     1441 aaatccccga gcacgggatc gccgccatgc gtcagccgca cgccctcgag cacgccgccg
     1501 cccagtgcca cgccgaaggc cagcgacagc tggatcgcca cctggctgat ggcggtcgcc
     1561 tggccggcgt cgcgatcgtc gatgtcggcg aaggtgaagg cgttggtcgc cgtccagaac
     1621 accgactgga agaagccggt gacgacgagc agcgacatca tcaccgccat cggcgtagtc
     1681 gggccgtaaa cgcccatcgc atagaccccg agcacggtga tgaacgtcgc caccaccagc
     1741 gacaggcgga agccgaagac cctcaggatc ggctccgaga cgaactttgc gccgaatgcg
     1801 cccaccgccg tcgcgaacgt caccgtgccg ctctggaatg gcgtcatgcc gaaggccagc
     1861 tgcagcatca gcgggaacag gaacggcatc gcgccggtgc cgagccggaa gaacgtgccg
     1921 gcgatgaccg tggtgcggaa cagcggaaag cggaacagcc gcaggtcgag gatcggatat
     1981 tcggtccggc ggaaatgcca cagatagccc agccagctga ccgtgccgcc gatcagcgcg
     2041 acatagccga aggcgagggg aagcgccggc agggtcagca ccgagatgcc gaacacccag
     2101 ccggcaaacg ccaggcccga caggaagaag ccgggaaagt cgattcgccg cggcaggttg
     2161 cgatgccagt ccggcagcag ccagctgacc agcccgatgc cgaggagccc gatcggcacg
     2221 ttgatcagga agatccagtg ccagctgagg taggtggtga tgaagccgcc gatcggtggc
     2281 cccacgatcg gcccgacaag tccgggaatg ctgagccagg ccatggcgtc gaccagctgg
     2341 ttgcgcggtg tcgtgcgcac cagcaccagc cgcgccaccg gcgtcatcag cgcgcccccg
     2401 aacccctgca ggaaccgcga gacgacgaag gtccatagcg aatccgaggc cgcgcacgcc
     2461 agcgagccga ggatgaagat cacgatggcc gcccggaaca cgttgcgcgc tccccagcgg
     2521 tcggccatcc acgccgagat cggaatgaag atcgccagcg ccacgaggta ggccgtgagc
     2581 gccagcttga gcgcgatcgg ctcggaaccg atgtcgtgcg cgatcgccgc cagcgacgtc
     2641 gcgatcaccg tcgaatccat gttctccatg aacagcgcga cggcaaggat cagcgggacg
     2701 aggcgattgg tcatcggttt gggaccggcg ggggctccgc cgctctaaca tgtcagtttt
     2761 gaactgtcag gcgacagctt cggctttcgg cagcggcttc aggcgatggc cggagacgtt
     2821 cgccccggcg tcgggcggca gccggaagaa ctggacggcg ctgatcgccg ccagcgccgc
     2881 gacgacatac cacgcgatgt ggaagtccat caggtcgagc ggcgcgttgc ggacctgggt
     2941 ggtgatctcg agcacgccgc ccgccaccga cacgccgagc gccaccgaaa tctgctggac
     3001 caccgcggcg atcgaggtgg cctggctggc gtcggcctcg ctgacgtcgg cgtacccgaa
     3061 ggtgttgacc ccggtaaaga agaacgaccg cgtgagtccg ccgatgaaca ggcagaacat
     3121 caggaaataa tggttggtgt cgggcgtgaa gaggccgttg atcgcgagga agaagcagcc
     3181 cagcagcgag gtgaccgcca gcacgcgcgg aaagccgaag cgcgcgtaga gacgcgtggc
     3241 gccgaacttc gagatgatcg ccccgaacgc ggcgacgaac gtggtcagcc ccgactcgaa
     3301 cggcgtcagg ccgaacatca gctgcagcat cagcggcatc aggaacggga acgcgccgat
     3361 gccgatgcga aagaacgtgc cgccgaccac cgccgtccgg aagacccggt tgcggaacag
     3421 cttgggatcg agcaagggga actgcgtgcg cttggtgtgc cagtagtaca gccccagcga
     3481 gacggcgccg acggccacgg tggcgtagcc gatcacggtc ggaatggccg gcaggctgat
     3541 caccgaaagc ccgaagatca tcccggaaaa cccgatggtc gttaggaaaa agccgatgac
     3601 gtcgataggt cgcggcgttc gcggctccgg cggtggcagg aaacgcgtcg ccagcaggat
     3661 gccgatgacg ccgatcggca cgttgatcca gaagatccag tgccagctga ggtaagtggt
     3721 gaggaatccc ccgatcggcg ggccggtgag cggtccgatc aacgccggaa ccgtcagcca
     3781 ggccatcgcc gagacgagtt cgttgcgcgg tgtggcgcgc agcagcacca gtcgggcgac
     3841 cggcgtcatc atcgagccgc caatgccctg caggaacctt gaaaccacga aggtcggcaa
     3901 cgaattggag aacgcgcagc agatcgagcc gacgacgaac accccgatcg cgatgcggaa
     3961 gatattggac gagccgaagc gatcggccat ccagccggag atcgggatga acaccgccag
     4021 cgacacgaaa tacgaggtaa gcgccagttt cagggcgatc ggactgctgt ggatgtccgt
     4081 ggcgatggcc ggcagcgacg tggcgatcac cgtcgaatcc atgttctcca tgaacagggc
     4141 gacggcgagg atcagggggg tgaggcggat caagttcgag cccgatcggg caaagggaat
     4201 ggacggggcg gaggaattgt tatgctccta acgattagtc atgcgccgtg aaaggcgtga
     4261 tcgcaagacc gtgacaacag gctctccggt tgaccaaacc ggccgttcca gtttgaattg
     4321 aagccagaac caagagttta ccaacgatga agagcttttc cgcctccagt ttcgcctccg
     4381 accacgcgat cgcgctggat ctggccgccc aggccgtccg cgacgacccg cacgccctgt
     4441 tcaccaattt ccagtggttc ctctatgccg gccgggacac ggtgttcttc accgcgttct
     4501 cccgctcgcg cttcaccaag gaaatggtcg agggcctggt cgagcagatg gtggggctgg
     4561 cgccgcaact cacccacggc ttcgaggggg cgcggccggg ccatccgttc acgcggcatc
     4621 tgctcgacgc catcaccagc atcgaggaag tcgacagctt cgacggctac cccgacaaat
     4681 ggctgggcag cagccaggac gtcttcgacc agcccgacct gccgctgttc cgggtcatgg
     4741 ccgccaacct ccgggacggt gccgacgagc agggtcgcgt ctccatcatc caggtgcgct
     4801 ccgcccattg cctgatggag gggtccgacg ccgcattgct cacccgctcg cagaccgcca
     4861 accacggtat ccagtccaac cacggcaacc ggctcggctg gctggagcgc ttccgcggcg
     4921 cgctcagtgg atttgcgatg gcgacgctgt tcgctggtgc cggcaatctc gtcaacgcgc
     4981 ccgatcggcc gctgtcgttc aagacgctgg cgctgtcgcg ccaccgcgtg cgcaagctcg
     5041 ccaataagtt ccacatccgc cagcgctcgc tgtacttcgc cctggtcacc tacgcgctgc
     5101 attccgagaa ggaccggcgg gtcaaggaga aggtgatcac cgccgcctac accatgctcg
     5161 ataccaagcg caccgcctcg gacgacgatt tcttccgggt tcgcgcgctg caggcggctt
     5221 tccccttcga ggccgacttc gtcagctacg cgcgcgccgt cgatgccgag atgggaaccg
     5281 gcgagcagaa ggacctgtcg aagttccagc tcaccatcct ctcgatgatg gcggcgctgc
     5341 gccggctcgg gaaagtcttc ccctggatga tcaacgacaa ggtctggcgc ttccagggct
     5401 cgcagatgga cctggtgctg accctcgtgc cgccgcaccg cagcatgggg ccgctgaccg
     5461 aatggatgat cgagccgatc tattgcggcg ccttccacca gtcgaccaac atctgcacct
     5521 tctgcccggg ccgcgagttc atgacgctca acttcgtggt cgaggaacgg catctgagcc
     5581 gcattccacg ggtcgagcag ctgctcgccg aactcgaggc ggcctgaccg cttcccaaag
     5641 ccgggggccg atgatattga ccctcgccaa cccgcagctg ggccgtgagt cgcttgctgc
     5701 gggcttcctg ttttgatgca gagaaggggc cttccttggc gaagatcgta tcctccatta
     5761 ccggcgatgc cgcgctgacc ttcgacgacg tgctgctgca gccggcgcgc tccgacgtgc
     5821 tgcccacgga ggtgtcgatc gccagtcgcg tcacccgcga catcgagctc aatctgccga
     5881 tcctgagcgc ggccatggac accgtcaccg aacaccagat ggccattgcc atggcgcagg
     5941 ccggcggcat cggcgtcatc caccgtaatc tcgagccggc cgagcaggcc gagcaggtcc
     6001 ggcaggtcaa gagcttcgag agcggcatgg tggtcaatcc gatcaccatc ggtcccgatg
     6061 cgacccttgc cgacgcgctg gcgctgatgc gggccaaccg catctccggc atccccgtag
     6121 tcgccaatgg cgggcagggc gggcgcatta ccggccgcct cgtcggcatc ctcaccaacc
     6181 gtgacgtgcg cttcgccacc aacgagcgcc agaagatcgc cgagctgatg acgcatgaga
     6241 acctcgtcac cgtgcgcgac ggcgtcggcc gggacgaggc caagcgcctg ctgcatgcca
     6301 accgcatcga aaagctgctg gtcctcgacg acgccggcaa tctgatcggc ctcgtcaccg
     6361 tcaaggacat cgagaaagcc cagctcaacc cgatggccat caaggatgca cagggccgcc
     6421 tgcgcgttgc cgccgcctcc accgtcggcg acaagggcta tgagcgctcg atggcgctga
     6481 tcgaggccgg cgtcgacctg ctggtcatcg ataccgccca cggccattcg gtgcgcgtcg
     6541 ccgaagcggt cgagcgggtg aagcgcgaga gcaactcgac ccgcatcgtc gccggcaatg
     6601 tcgccaccgc cgaggcgaca cgggcgctga tcgatgccgg agccgactcg atcaaggtcg
     6661 ggatcggtcc gggctcgatc tgcaccaccc gtatcgtcgc cggcgttggc gtgccgcagc
     6721 tcgcggcagt gatggcctgc gccgaggaag ccgacaagaa cggggttccg gtgatcgccg
     6781 atggcggcat caagttctcg ggcgacctgg cgaaggcact cgccggcggc gcctcgtgcg
     6841 ccatgatcgg ctcgctgctc gcgggtaccg atgaaagccc cggcgaggtc tatctctacc
     6901 agggccgcag ctacaaggcg taccgcggca tgggctcggt cggcgccatg gcccgcggct
     6961 cggccgatcg ctatttccag caggaagtgc gcgatgccct caagctcgtg cccgagggga
     7021 tcgagggcca ggtgccctac aagggcccgg ccggcaatgt gctgcaccag ctcgccggcg
     7081 gcctgcgcgc cgccatgggc tacaccggcg cccacgacct gcaggatttc cgcgacaacg
     7141 cgacgttcgt gaaaatctcc ggtgcggcgc tgagcgagag ccacgtgcac gacgtcacca
     7201 tcacccgcga g
//
LOCUS       DATAZA010000361        10550 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3061387, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000361 DATAZA010000000
VERSION     DATAZA010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 10550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10550
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3061387"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2280)
                     /locus_tag="VHZ56_09160"
     CDS             complement(<1..2280)
                     /locus_tag="VHZ56_09160"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HEX4298179.1"
                     /translation="MADDGKGNEAPGAPGIPPSWTSSAKDLVSTALGSSRIWATFGFG
                     VVNEVYWPSTGQPQLRDLGFIIKGPKGWTEVKRARRYLMTTPRACVPLPRFVHEGDDY
                     RLELECLTHPLRDGLLIRYRLEGEGQKLYVLVAPHLGGEQTDNYARAGVELTAQRGNV
                     AMCVCADGGFTRSSAGYVGGSDGWQDFDRNGEMTWTYGQASHGNVALTGELASPSGII
                     ALAFSETPEGARTLARSSLADDYDAVRDLFINGWEDWAKTLELPYIAPELKRVAELSA
                     AVLKIHEDRTYNGAVVASLSVPWGQSRDDLGGYHLVWTRDAVEAALALVAIGKSDDAA
                     RVLAYLIGTQGDDGSWAQNYFPSGRGYWTGNQLDEVAMPTMLAAKLKSTGNLVISPPV
                     EEMIHRAIGYIVRNGPMTDQDRWEENAGASPFTLSIAIAAMVAVAEFFDPARRDYILS
                     LADCWNERIESWTYTTSGQFCRSHDVEGYYVRIAPRAADGGLRGKVDVRNRTDGKADA
                     ATGLLGLEFLCLVRSGLRRADDPRITQTVRLVDAVLRVETPSGPSYYRYNDDGYGEHA
                     DGSPYDGSGIGRLWPLLTGERGHYALAAGEDARPYLEAMSRMTGDGGLIPEQIWDAAP
                     IPELGLQPGKPSGSAMPLVWAHAEFLKLVAAQANGRPTELLDAVQQRWNGVAPAAATW
                     FWRPNSPFRRAPAGRTLLFEDGGAFQLAYTPEGGAQVTAEAVPTQFGMFGVSVPPDTL
                     KGALRLGFTLTRADGSQIAD"
     gene            complement(2270..3055)
                     /locus_tag="VHZ56_09165"
     CDS             complement(2270..3055)
                     /locus_tag="VHZ56_09165"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009488709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX4298180.1"
                     /translation="MLDIDLKGRRALVTGGNSGIGAAIVASLAEAGADVAINFVTHPE
                     TADAGADAVRKAGGRALALAADVSNAEAVAAMFKRLDAEWGGLDILVNNAGIDGKSMP
                     GASADLDEWRRVIDINLCGAFYCAREALSRMQKQRRGVILNMSSVHEVIPWSGYSAYA
                     ASKAGLSMLSRTLAQEAAPFNVRVLALAPGAIKTAINQAVWSDPAGLADLNAKIPLGR
                     MGETQEIARMATVLVSDIASYATGTTLFVDGGMTDYADFSHGG"
     gene            3176..4105
                     /locus_tag="VHZ56_09170"
     CDS             3176..4105
                     /locus_tag="VHZ56_09170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HEX4298181.1"
                     /translation="MRIDILQTDRLLASCEAALAATYTVHKLHEAADREALLAAVADR
                     VRGIAGVRVDAGLMHRLPRLEIIANFGVGYDGIDTRAARQRGIRVTNTPGVLNDAVAE
                     IAIGLMVALARHIPQADRFVREGRWPTGHFPFQRELNGRTLGILGLGRIGKEIAARAQ
                     AMKMRVVYHGRHRQPDEPFAYYDSLEAMARDADWLLAIAPGGSATEKLVSRAVLEALG
                     PEGCFVNMARGSLVDEAALVELLQQGRLGGAALDVFAREPEVPAALLALDNVVLSPHQ
                     GSATLQTRDKMGALLVANLAAHFAGEPLPSAVA"
     gene            4195..5853
                     /locus_tag="VHZ56_09175"
     CDS             4195..5853
                     /locus_tag="VHZ56_09175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase family protein"
                     /protein_id="HEX4298182.1"
                     /translation="MREWWRGGVIYQVYPRSFQDTNGDGVGDLPGIMRRLDHIASLGV
                     DCVWLSPIFESPQADMGYDVSNYYDVDRLFGSLEDFDDLVKRAHALGLKVIIDQVLSH
                     TSDAHPWFRESRMNRSNSRADWYVWADPRRDGSPPNNWPSVFGGRAWEWNPSRGQYYL
                     HNFLTAQPDLNFHSAAVQDAVLDVLRFWLERGVDGFRFDTVNYYFHDAQLRNNPAARR
                     PKHLPYAVNPYDMQEHRFSKSQPENVPFLKRVRELLDKYPQTAAVGEVGDSHRGLQLM
                     AEYTAGGDKLHMCYTFDMLGKEFSASHFRTKMQGFFNAGADGWPCWSFSNHDVDRHVT
                     RWAAHGVDRKALARQAIALLIALRGSICVYQGEELGLPQADILFEELTDPPGIRFWPE
                     YKGRDGERTPIPWDAGEAPNGFTAGKPWLPVKPDHSSLAVATQEADPDSTLKHYREAL
                     AFRRAHPALVDGDLEFLKANEPVLAFRRSGGGESLVCLYNLSAATVKLRLSGEASMPF
                     AHDAERRKDKLVLGPNGYAILAEGESRVHVEFAARPRRTAAVQK"
     gene            complement(5899..6213)
                     /locus_tag="VHZ56_09180"
     CDS             complement(5899..6213)
                     /locus_tag="VHZ56_09180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298183.1"
                     /translation="MKNISYMVLTAALALGGFSVAPAVAASSVGQVPMCDSTTSKSDM
                     AMNLDKERLDHRSGETLQSLDVWNGCLKAIYTDANGHSTTAFYDPDTLNLVAGTQPHR
                     AG"
     gene            complement(6437..6739)
                     /locus_tag="VHZ56_09185"
     CDS             complement(6437..6739)
                     /locus_tag="VHZ56_09185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298184.1"
                     /translation="MKQLILLGAAALIALSAAPAWAVPMCDNPQFDQSFQKVFGKPAI
                     SQDDQALNIERELNRMGIDATNTRFWNGCVQTFVREDGHTVMKFYNPDTLQEIPVN"
     gene            complement(6739..7908)
                     /locus_tag="VHZ56_09190"
     CDS             complement(6739..7908)
                     /locus_tag="VHZ56_09190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20 aminoacylase family protein"
                     /protein_id="HEX4298185.1"
                     /translation="MPVINRVAEFQREIAEWRQDFHRNPELQYDVQRTAGRVAELLRG
                     FGADEVVTGIGRTGVVAVIKGKNGGAGRVIALRADMDALPITENTGKPYASTVNGKMH
                     ACGHDGHTAMLLGAAKYLAETRNFAGTAVLVFQPAEEGGAGGRAMLQDGLVERFGIEE
                     FYGLHNMPGIPAGRFAVKAGGIMAASDQFDITIEGKGGHAAIPHNTIDPVIVGAHLIL
                     ALQTIVSRNVDPMREAVLSVTMVSTGIAFNIIPRTVKITGTVRTLDEVTRKFMDERIR
                     TLTAGIAGTFGATASVAYRYGYPVTVNAAGPTAFAASVARTVAGDANVDADADGAMGA
                     EDFAYMLQARPGAYIFLGNGPSTELHSDTYDFNDDIIPVGVSYWAKLVEAALPAN"
     gene            8039..9223
                     /locus_tag="VHZ56_09195"
     CDS             8039..9223
                     /locus_tag="VHZ56_09195"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid aminotransferase"
                     /protein_id="HEX4298186.1"
                     /translation="MFETLQKATLDKIFVLMAEYAADPRADKIDLGVGVYKDDRNNTP
                     IMSAVRKAEQRIHDKASTKTYKGVVGNREFSAAIVDLALGDAVDKSRVRCVNGAGGTG
                     ALMILMFVLGRARPKGKIYISDPSWPNHWPLAENANLTPVTYPYFDPQTRRVDFDAMM
                     QAVDRLTSDDVILLHGCCHNPTGANLTPTQWDRVVESLKRTGAFPLVDLAYLGFGDGL
                     EADAYGVRKVASSLPEAMIAFSASKNFGLYRERTGVAIAIARDAATADVVSSQMQNII
                     RGTISQTPDHGAEIVRTILEDKELRAEWEAELNAMRERMQRLRVKLAAAIKRKSNSRD
                     FDFIAEHSGMFSLLGLPQDVVEKLKKDDAVYMINDSRINVAGIPEDRVDELADYLIAA
                     AG"
     gene            9315..9968
                     /gene="fsa"
                     /locus_tag="VHZ56_09200"
     CDS             9315..9968
                     /gene="fsa"
                     /locus_tag="VHZ56_09200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008197099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HEX4298187.1"
                     /translation="MQFFADTAEIEDIKKLHEMGLLDGITTNPSLIAKSGRQFKEVIK
                     EICSVVPGPVSAEVASIDFDTMMNEAHVLAKLADNVVVKVPLTVDGLKACKKLSSEGI
                     KTNVTLCFSPNQALLAAKCGATYISPFIGRLDDINLDGVELIEQIRQIYDNYDYTTQI
                     LAASIRTPNHITEVALAGADVATIPPAVIYKLADHPLTKSGLEQFVKDWKATGQSIL"
     gene            9970..>10550
                     /locus_tag="VHZ56_09205"
     CDS             9970..>10550
                     /locus_tag="VHZ56_09205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-loop NTPase"
                     /protein_id="HEX4298188.1"
                     /translation="MADAELVAAVKAALGQVEIPGGGTLGSYSGLSDIIVTKSAVALA
                     ISVQPGMEAAFGPARIAAQAAAQAVAEGRKVMVSVTSDKAPPQATGQAAAHGRPGPAP
                     KSPVPGIRNIIVVGSGKGGVGKSTVAVNLALAFAAEGLRTGLLDADLYGPSVPKLLGI
                     EGKPAVREDGIFTPHQAHGLKVMSIGSMLSPGQA"
BASE COUNT         1723 a         3793 c         3292 g         1742 t
ORIGIN      
        1 gtcggcgatc tggctgccgt cggcccgtgt cagcgtaaag ccgagccgca gggcaccctt
       61 cagcgtgtcg gggggcacgc tgacgccgaa catgccaaat tgcgtcggca ccgcctcggc
      121 cgtcacctgc gcgccgccct ctggcgtgta cgccagctgg aacgccccgc cgtcctcgaa
      181 cagcagcgtc cgccccgccg gcgcccgacg gaacgggctg ttgggccgcc agaaccaggt
      241 ggccgccgcc ggcgccacgc cgttccagcg ttgctgcacc gcatccagca gttcggtcgg
      301 ccggccattg gcctgcgccg ccacgagctt caggaattcg gcgtgcgccc acaccagcgg
      361 catcgcgctt cccgacggct tgcccggttg caggccgagc tcggggatcg gcgcagcgtc
      421 ccagatctgc tcggggatca gtccgccgtc gcccgtcatc cggctcatcg cctcgagata
      481 gggcctcgcg tcctcgccgg ccgccagcgc gtagtggccg cgctcgccgg tgagcagcgg
      541 ccacagcctg ccgatgccgc tgccgtcata ggggctgccg tccgcgtgct cgccatagcc
      601 gtcgtcgttg tagcgataat agcttggccc cgacggcgtc tcgacgcgca gcaccgcatc
      661 gaccagccgc accgtctggg tgatccgcgg atcgtccgcc cggcgcaggc cggagcgcac
      721 gaggcaaagg aactcgagac ccagcaggcc cgtcgccgca tcggccttgc cgtcggtgcg
      781 gttgcgcacg tccaccttgc cgcgcaaccc gccatcggcc gcccgtgggg cgatccggac
      841 atagtacccc tcgacgtcgt ggctgcggca gaactggccc gaagtcgtgt aggtccagct
      901 ctcgatccgc tcgttccagc aatcggcgag cgacaggatg tagtcgcgcc gggccggatc
      961 gaagaactcc gccaccgcga ccatcgcggc gatggcgatg ctgagcgtga acgggctcgc
     1021 cccggcgttt tcctcccagc ggtcctggtc ggtcatcggg ccgttgcgca cgatgtagcc
     1081 gatcgcccgg tggatcatct cttccaccgg cggcgagatc accaggttgc cggtgctctt
     1141 cagcttggcc gccagcatcg tcggcatcgc cacttcgtcc agctggttgc cggtccagta
     1201 gccgcgcccg gacggaaaat agttctgcgc ccagctgccg tcgtcgccct gcgtgccgat
     1261 caggtaggcg agcacccggg ccgcgtcgtc gctcttgccg atggcgacca gcgccagcgc
     1321 cgcctccacc gcgtcgcgcg tccacaccag gtgatacccg cccagatcgt cgcggctttg
     1381 cccccacggc acgctgaggc tcgccaccac ggcgccgttg taggtgcggt cctcgtggat
     1441 cttcagcacc gccgccgaca gctcggcgac gcgcttcagt tccggcgcga tgtacggcag
     1501 ctcgagtgtc ttcgcccagt cctcccagcc attgatgaag aggtcgcgca ccgcgtcgta
     1561 gtcgtcggcg aggctcgacc gcgccagcgt ccgggcccct tcgggcgttt ccgagaacgc
     1621 cagcgcgatg atgcccgatg gcgacgccag ctctcccgtc agcgccacgt tgccgtggct
     1681 cgcctgcccg taggtccagg tcatctcgcc attgcggtcg aaatcctgcc agccgtccga
     1741 gccgccgaca tagccggcgc tgctgcgggt gaagccgccg tcggcgcaca cgcacatcgc
     1801 cacattgccg cgctgcgccg tcagctccac gcccgcccgg gcgtaattgt ccgtctgctc
     1861 gccgcccagg tgcggcgcca ccagcacgta gagcttctgg ccctcgccct cgagccggta
     1921 gcggatcagc agcccgtcgc gcagcggatg cgtcaggcat tcgagttcca gccggtagtc
     1981 gtcgccttcg tgcacgaagc gcggcagcgg cacgcaggcc cgcggcgtcg tcatcaaata
     2041 gcgccgcgcc cgcttcacct cggtccagcc cttcggaccc ttgatgatga aaccgagatc
     2101 ccgcagctgc ggctggccgg tcgatggcca gtacacctcg ttgacgacgc cgaacccgaa
     2161 cgtcgcccag atgcggctcg agccaagcgc cgtcgacacc agatccttgg cgctcgaagt
     2221 ccagctcggc gggatgccgg gtgcccccgg cgcttcgttg cccttgccgt catccgccat
     2281 gggagaaatc cgcgtaatcg gtcatgccgc catcgacgaa cagtgtcgtg ccggtggcgt
     2341 agctggcaat gtcggagacg aggaccgtcg ccatccgcgc aatctcctgc gtctccccca
     2401 tccgtcccag cgggatcttg gcattgaggt cggcgagccc cgccgggtcg ctccacaccg
     2461 cctggttgat cgccgtcttg atcgcgcccg gcgccagcgc cagcacgcgc acgttgaacg
     2521 gcgccgcctc ctgcgccagc gtccggctca gcatcgacag cccggccttc gacgccgcat
     2581 aggcgctgta gccgctccac gggatcactt cgtgcaccga cgacatgttg agtatgacgc
     2641 cgcgccgctg cttctgcatg cgcgacagcg cctcccgcgc gcagtagaac gcgccgcaca
     2701 gattgatgtc gatcactcgc cgccactcgt cgaggtcggc gctggcgccc ggcatcgact
     2761 tgccgtcgat gccggcattg ttgacgagga tatcgagccc gccccattcg gcgtcgagcc
     2821 gcttgaacat cgccgcgacg gcctcggcgt tcgatacgtc cgccgccagg gccagcgcgc
     2881 gcccgccagc cttgcggacc gcatcggcgc cggcgtcggc agtttccgga tgggtcacga
     2941 agtttatggc aacatcggca ccggcctctg cgaggctggc gacgatcgcc gcgccgatgc
     3001 cggagttgcc gccggtgacc agcgcgcggc gccccttgag atcgatatcg agcatgcgaa
     3061 acgccccttg tttgcgtagc ataacgaagg atcaccgccg ctgttgcttt acaaactctt
     3121 catgttcggc cgtgtccgtg tcgacaggcc cgatcctgca ctctaagaca cccgaatgcg
     3181 catcgacatc ctgcaaaccg accgcctgct ggcctcctgc gaggccgcgc tggccgcgac
     3241 ctacaccgtc cacaagctcc acgaggcggc cgatcgcgag gcccttctcg ccgccgtcgc
     3301 tgaccgcgtg cggggcatcg ccggcgtcag ggtcgacgcc gggctgatgc atcgcctgcc
     3361 caggctcgag atcatcgcca atttcggtgt cggctacgat ggcatcgata cccgcgccgc
     3421 gcgccagcgt ggcatccgcg tcaccaacac ccccggcgtg ctgaacgatg ccgtcgcgga
     3481 aatcgccatc ggcctgatgg tggcgctcgc ccgccacatt ccgcaggccg accgtttcgt
     3541 gcgcgagggg cgctggccga ccggacactt tcccttccag cgcgagctca acggccgcac
     3601 gctcggcatc ctcggcctcg gccgcatcgg caaggagatc gccgcccgcg cccaggccat
     3661 gaagatgcgc gtcgtctacc acggccgcca ccgccagccg gacgagccgt tcgcgtacta
     3721 cgacagcctc gaggccatgg cccgcgacgc cgactggctg ctggccatcg cccccggcgg
     3781 cagcgccacc gaaaagctgg tgtcccgcgc cgtgctcgaa gcgctcgggc cggaaggctg
     3841 cttcgtcaac atggcccgcg gctcgctggt cgacgaggcg gcgctggtcg agctgctgca
     3901 gcagggtcgc ctcggcggcg ctgccctcga cgtcttcgcg cgcgagcccg aggtgccggc
     3961 ggcgctgctg gccctcgaca acgtcgtgct ctcgccgcac cagggcagtg ccaccctgca
     4021 gacccgcgac aagatgggcg cgctgctcgt cgccaatctc gccgctcact tcgccggcga
     4081 gccgttgccc agcgccgtgg cctgaccgcg acgacggaac ccggccacgg ccggatggat
     4141 tgcaatttca ccacgcgcgc cgcatcactg ccggccggga acaaggagca agcgatgcgg
     4201 gaatggtggc gcggcggggt gatctaccaa gtctatccgc gctcgttcca ggacaccaat
     4261 ggcgacggcg tcggtgacct gcccggcatc atgcgccggc tcgaccacat cgcctcgctt
     4321 ggcgtcgact gcgtctggct ctcgcccatc ttcgagagcc cgcaggccga catgggctac
     4381 gacgtctcca actattacga cgtcgaccgc ctgttcggca gcctcgagga cttcgacgat
     4441 ctggtgaagc gcgcccatgc gctggggctc aaggtcatca tcgaccaggt gctgagccac
     4501 acctccgacg cccatccgtg gttccgcgag agccgcatga accgctcgaa ttcgcgcgcc
     4561 gactggtacg tctgggccga cccccggcgc gacggctcgc cgcccaacaa ctggccttcg
     4621 gtgttcggcg gccgcgcctg ggaatggaac ccgagccgcg gccagtacta cctccacaat
     4681 tttctcaccg cccagcccga cctcaatttc cacagcgccg cggtgcagga cgccgtgctc
     4741 gacgtgctgc gcttctggct cgagcgcggc gtcgacggct tccgcttcga taccgtcaac
     4801 tactatttcc acgacgcgca attgcgcaac aacccggccg cccgccggcc gaaacatctg
     4861 ccatacgccg tcaatcccta cgacatgcag gaacatcgtt tcagcaagag ccagcccgag
     4921 aacgtgccct tcctcaagcg cgtccgcgag ctgctcgaca aatatccgca gaccgccgcg
     4981 gtcggcgagg tgggcgacag ccatcgcggc ctgcagctga tggccgagta cactgccggc
     5041 ggcgacaagc tccacatgtg ctataccttc gacatgctgg gcaaggagtt ctccgccagc
     5101 catttccgca ccaagatgca gggcttcttc aacgccggcg ccgatggctg gccgtgctgg
     5161 agtttctcca accacgacgt cgatcgccac gtcacccgct gggcggcgca cggggtcgac
     5221 cgcaaggcgc tggcccgcca ggccatcgcg ctgctgatcg cgctcagggg ttcgatctgc
     5281 gtctaccagg gcgaggaact ggggctgccg caggccgata tcctgttcga ggagctgacc
     5341 gacccgcccg gcatccgctt ctggcccgag tacaagggtc gcgacggcga gcgcacgccg
     5401 atcccctggg acgccggcga ggcgccgaac ggctttaccg ccggcaagcc gtggctcccc
     5461 gtcaagcccg atcactcgag tctggcggtc gccacgcagg aagccgatcc cgactcgacc
     5521 ctcaagcatt atcgcgaggc gctggcgttc cgccgcgccc acccggcgct ggtcgacggc
     5581 gatctcgagt tcctcaaggc caacgagccg gtactggcct tccgccggtc cgggggcggc
     5641 gagagcctcg tctgcctcta caatctctca gccgccaccg tgaagctccg gctcagcggc
     5701 gaggcgtcca tgccgttcgc tcatgacgcc gagcgccgca aggacaagct ggtcctcgga
     5761 cccaacggct acgccatcct cgccgagggc gagagccggg tgcacgtcga gttcgcggcg
     5821 cgccccaggc gtacggcggc ggtccagaaa taagggcgcg ggggtcgccc cctcgcgcct
     5881 tgcgtaggcc tgagccgctc agccggcgcg gtgcggctgc gtgccggcca ccaggttcag
     5941 cgtgtcggga tcgtagaacg ccgtcgtgga gtggccattg gcgtcggtgt agatcgcctt
     6001 caggcagccg ttccatacat cgaggctctg cagcgtctcg ccgctgcgat ggtcgagccg
     6061 ttccttgtcg aggttcatgg ccatgtcgga cttcgaagtc gtgctgtcgc acatcggcac
     6121 ctgtccgact gagctggcgg ctaccgccgg cgcgaccgaa aaaccgccaa gcgccagggc
     6181 agcggtgagg accatatagg aaatgttttt cattttctaa aactccgttc aacgttcggg
     6241 gaggaacgcc agcccaatct gggaccgctc ccttcgcatt gccaattaca agcggctgaa
     6301 cggggttaaa tcgatgcaag cgctcggaca gcattgtcac gactgcgcga cagcggaacc
     6361 ttttcgccgc ctcggcaaac gaaaacgcca cccggtattc cgggtggcgc gtctaagtta
     6421 gcgggtacgc agccggttag ttgaccggaa tttcctgcag cgtgtccgga ttgtagaact
     6481 tcatcactgt gtggccgtct tcgcgcacga aggtctgcac gcagccattc cagaaccggg
     6541 tgttggtggc atcgatgccc atgcggttca gctcgcgctc gatattcagc gcctggtcgt
     6601 cctgcgagat ggccggcttg ccgaacacct tctggaagga ctggtcgaat tgcggattgt
     6661 cgcacatcgg cacggcccag gccggcgccg ccgagagcgc gataagcgcc gccgcgccca
     6721 acaggatcag ttgtttcatc agttagccgg cagtgccgcc tccacaagtt tcgcccagta
     6781 gcttacgccc accgggatga tgtcgtcatt aaagtcatat gtgtcggaat gaagttcggt
     6841 ggaaggtccg ttgccgagaa aaatgtacgc cccgggccgc gcctgcagca tgtaggcgaa
     6901 gtcctcggcc cccatcgccc cgtcggcatc cgcatcgaca ttggcgtcgc ccgcgacggt
     6961 gcgcgctacg ctcgccgcga aggccgtcgg gcccgccgcg ttcaccgtga ccgggtagcc
     7021 gtagcggtag gcaacgctgg cggtagcgcc gaacgtgccg gcaattcccg cggtcagggt
     7081 gcggattcgc tcgtccatga acttgcgggt gacttcgtcg agcgttcgca ctgtacccgt
     7141 gatcttgacc gtgcgcggaa tgatgttgaa cgcgatgccg gtcgacacca tcgtcaccga
     7201 cagcaccgcc tcgcgcatcg gatcaacatt gcgtgatacg atcgtctgca gcgccaggat
     7261 gagatgcgcc cccacgatca ccggatcgat cgtgttgtgc gggatcgccg catggccgcc
     7321 cttgccctcg atggtgatgt cgaactggtc gctcgccgcc atgatgccgc cggccttcac
     7381 cgcgaagcgg cccgccggga tgccgggcat gttgtgcagc ccgtagaact cttcgatgcc
     7441 gaagcgctcg accagcccgt cctgcagcat ggcacggccg ccggcgccgc cttcctccgc
     7501 cggctggaac accagcaccg ccgtgccggc gaaattgcgc gtctcggcga ggtacttcgc
     7561 cgcgcccagc agcatggcgg tgtgcccgtc atggccgcag gcgtgcatct tgccgttcac
     7621 cgtcgacgca tacggcttgc cggtgttctc ggtaatcggc agcgcatcca tgtcggcgcg
     7681 cagcgcgatc accctgccgg ccccgccatt cttgcccttg atcaccgcca cgacgccggt
     7741 gcgcccgatt ccggtgacga cctcgtccgc accaaagccg cgcagcagct ccgcgacacg
     7801 cccggccgtg cgctgcacgt cgtactgcag ctccgggttg cggtggaaat cctggcgcca
     7861 ttcggcgatc tcgcgctgaa actcggcgac gcgattgatg acgggcataa ttgtctcggc
     7921 tgctaaagac gcagtgtgcc ggtttgagcc tgaaaccgtc aacccttgac ggcatcaccg
     7981 gtgattgtca taggccactt gcccgccagc ctggcggctt tccagccgga ccatcccgat
     8041 gttcgaaacc ctgcaaaagg ccacgctcga caagattttc gtgctgatgg ccgagtatgc
     8101 cgccgacccg cgcgccgaca agatcgacct cggcgtcggc gtctacaagg acgaccgcaa
     8161 caacaccccg atcatgtcgg cggtccgcaa ggccgagcag cgcattcacg acaaggcgtc
     8221 gaccaagacc tacaagggcg tcgtcggcaa cagggaattc tccgctgcca tcgtcgatct
     8281 cgcgctcggc gatgccgtcg acaagtcccg cgttcgctgc gtcaacggcg ccggcggcac
     8341 cggcgcgctg atgatcctga tgttcgtcct cggtcgcgcc cggcccaagg gcaagatcta
     8401 catttccgac ccgagctggc ccaatcattg gccgctggcc gagaatgcca atctgacgcc
     8461 ggtcacctat ccctatttcg atccgcagac ccggcgcgtc gatttcgacg ccatgatgca
     8521 ggccgtcgac cgcctcacca gcgatgacgt gatccttctt catggctgct gccataaccc
     8581 gaccggcgcc aacctgacgc cgacgcagtg ggatcgcgtg gtcgaaagcc tcaagcgcac
     8641 cggggctttc ccgctggtcg acctcgccta tctcggcttc ggcgacggcc tcgaggcgga
     8701 cgcctatggc gtccgcaagg tcgcctccag cctgcccgag gcgatgatcg ccttttccgc
     8761 cagcaagaat ttcggcctct atcgcgagcg caccggtgtc gccatcgcca tcgcccgcga
     8821 cgccgcgacc gccgatgtcg tctccagcca gatgcagaac atcatccgcg gcaccatcag
     8881 ccagaccccc gaccacggtg ccgagatcgt ccgcaccatc ctcgaggaca aggagctgcg
     8941 cgccgagtgg gaggccgagc tcaacgccat gcgggaacgc atgcagcgcc tgcgcgtcaa
     9001 gctcgccgcc gccatcaagc gcaagtccaa cagccgggat ttcgacttca tcgccgagca
     9061 ttcggggatg ttttcgctgc tgggcctgcc gcaggacgtg gtcgagaaac tcaagaagga
     9121 cgacgccgtc tatatgatca acgacagccg catcaacgtc gccggcatcc ccgaggatcg
     9181 cgtcgacgag ctggccgact acctgatcgc ggctgccggc tgaggccgag aaaaccgcgc
     9241 atgcatcttt ccgctgcgcc gcaaattgcc tatctacgga tcacacgcac atatggcttc
     9301 ccgggagagg aaaaatgcag ttttttgctg ataccgccga gatcgaggac atcaagaagc
     9361 ttcacgagat ggggctgctc gatggcatca ccaccaaccc ctccctcatt gccaagtccg
     9421 gccggcagtt caaggaagtg atcaaggaga tctgctcggt ggtccccggg ccggtttcgg
     9481 ccgaggtcgc ctcgatcgac ttcgatacga tgatgaacga ggcgcacgtg ctggccaagc
     9541 ttgccgacaa cgtggtggtc aaggtgccgc tcaccgtcga cggcctcaag gcctgcaaga
     9601 agctcagctc cgaaggcatc aagaccaacg tcacgctgtg cttttcgccg aaccaggcgc
     9661 tgcttgccgc caaatgcggc gcgacctaca tctcgccctt catcggccgg ctcgacgaca
     9721 tcaatctcga cggcgtcgag ctgatcgaac agatccgcca gatctacgac aactacgact
     9781 acaccacgca gatcctcgca gcctccatcc gcacccccaa ccacatcacc gaagtggcgc
     9841 tggccggtgc cgacgtcgcc accatcccgc cggcggtgat ctacaagctc gccgaccatc
     9901 cgctgaccaa gagcggcctg gagcagttcg tcaaggactg gaaggcgacc ggccagtcga
     9961 tcctctgagg tggcggacgc cgaactcgtc gccgcggtaa aggcggcgct ggggcaggtc
    10021 gagattccgg gcggcggcac gctgggaagc tattccgggc tgtccgacat catcgtcacc
    10081 aagagcgccg tcgccctggc gatttccgtc cagcccggca tggaggcggc gttcgggccg
    10141 gcccgcatcg cggcgcaggc ggcggcgcag gccgtcgccg aggggcgcaa ggtcatggtc
    10201 tcggtgactt ccgacaaggc cccgccgcag gcgaccgggc aggccgccgc gcatggccga
    10261 cccggcccgg cccccaaatc gccggtgccc ggtatccgca acatcatcgt cgtcggctcc
    10321 ggcaagggtg gcgtcggcaa gtcgacggtt gcggtcaacc tggcgctcgc cttcgccgcc
    10381 gagggcctgc gcaccgggct gctcgacgcc gacctctacg gcccctcggt gcccaagctg
    10441 ctcggcatcg agggcaagcc cgcggtgcgc gaggacggca tcttcacgcc gcaccaggcg
    10501 catggcctca aggtcatgtc gatcggctcg atgctgagtc ccgggcaggc
//
LOCUS       DATAZA010000362         2620 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2711293, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000362 DATAZA010000000
VERSION     DATAZA010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2620
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2711293"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..834)
                     /locus_tag="VHZ56_09210"
     CDS             complement(<1..834)
                     /locus_tag="VHZ56_09210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP nucleosidase"
                     /protein_id="HEX4298189.1"
                     /translation="MDTISPPAAPQKAFKNPEDAWAYVAELYHRNTGFIREQLIGLSH
                     GNVPKGRVRAYYPEVQVTSRSYGKTDSTLAYGYLHTPGVYRTTITAPDLFKTYLLQQF
                     SVILGNHGGTIDVGESTTRIPLHFALAPDERIDGEAINALPIPLRDLFDVPDLQDTDD
                     EIANGTFVPPPGGPYPLAHFTAPRVDYSLYRLSHYTGTDAEHFQNFVIFTNYGFYIDE
                     FCRLAKQYMAEGHPDYEAFVEPGNCVTRNVRLGGGTTGAPASRAPQMPAYHLKMSRAR
                     GI"
     gene            1276..1773
                     /locus_tag="VHZ56_09215"
     CDS             1276..1773
                     /locus_tag="VHZ56_09215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008875518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1993 domain-containing protein"
                     /protein_id="HEX4298190.1"
                     /translation="MPSMYAVSVGVFTRQLTNLLAQLEKAEAYAAERKFKVDTLVHQR
                     LIWDMAPLSFQVQNATDHAKGAAARLSGREVPSWPDDEKSFEDLKARIRKALDFLATV
                     KPADIDGSEDKPITLKRNGEDYVMNGQDYLLGRAQQNFWFHVTTAYDILRQNGVPVGK
                     SDYTR"
     gene            1773..>2620
                     /locus_tag="VHZ56_09220"
     CDS             1773..>2620
                     /locus_tag="VHZ56_09220"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HEX4298191.1"
                     /translation="MARALFVAAADILAAGALRGWIESGNEVAEIWTDPGFPLPGSQR
                     TMSTWAPGWSVRSLARTHGIPARTMPASWRRWTGVTEAVSGLAVDVLITCVTMQIVPP
                     AILDMFAGRAVNFHPALLPNYRGPSPYLGTILDGRDDCAGVTLHELTAGIDEGPTIAA
                     TPVSYAACGRRYPTWKARHAAAARRLGRTALPAFLAGGLPSRPQGEGLYRRVREEIRI
                     GPQMTAAEARRTASLIGRTGRLEIAGRRGVHVRAVTGDAGLPTGAPPDIGPLSVTIDV
                     ADRRLRL"
BASE COUNT          424 a          864 c          904 g          428 t
ORIGIN      
        1 gatgccgcgc gcccgcgaca tcttcaggtg gtaagccggc atctgcggcg cgcgcgacgc
       61 cggcgcgcca gtggttccgc cgcccagccg gacattgcgg gtgacgcaat tgccgggctc
      121 gacgaaggcc tcgtagtcgg ggtggccctc ggccatgtac tgcttggcga gccggcagaa
      181 ctcgtcgatg taaaagccgt aattggtgaa gatcacgaag ttctggaaat gctcggcgtc
      241 ggtgccggtg tagtggctca gccggtacag cgaatagtcg acgcggggcg ccgtgaagtg
      301 ggccagcgga taggggccgc cgggcggtgg cacgaaggtg ccgttggcga tctcgtcgtc
      361 ggtgtcctgc aggtccggca cgtcgaacag gtcgcgcagc ggaatcggca gggcgttgat
      421 cgcctcgccg tcgatgcgct cgtccggcgc cagcgcgaaa tgcagcggaa tgcgggtcgt
      481 cgactcgccc acgtcgatcg tgccgccgtg gttgccgagg atcaccgaga actgctgcag
      541 caggtaggtc ttgaacaggt cgggcgcggt gatcgtggtg cggtagacgc cgggggtgtg
      601 gaggtagccg taggccagcg tcgagtcggt cttgccgtag ctgcgcgagg tcacctgcac
      661 ctcggggtaa tacgcacgga cacggccctt gggcacgttg ccgtggctca gcccgatcag
      721 ctgctcgcgg atgaagccgg tgttgcggtg gtagagctcg gcgacatagg cccaggcatc
      781 ctccggattc ttgaaggctt tctgcggcgc cgccgggggc gaaatggtgt ccattgaaat
      841 ctcggtgcaa ggcgagcccg aaggctcagc gttgcggtgc tctcttaggg tttttgaccg
      901 tcacgggcaa cccggatgaa aactcggcaa tgaagttcac caataggtga gacgaccttt
      961 cattgcggcc cggatcgtcc atttatgcgg tgttcgctgg atttctgcaa acgacccatg
     1021 caccggtgaa ccgcgaggat gtctgccgct gcccccaagc cctcaacagt gcggcgggcg
     1081 ttctccacaa gggccacagc tccggaaacg gaactgtggc cccttcattt tcaggcgctg
     1141 acaaggtcgc gccggcggtt gcgccgcccc ccggttttgg gctaaccatc ggcgactgcc
     1201 gatgaaggga ggagcccatt cttcggcggt cgttcgcggg ccgctccggc cgttctcaca
     1261 caaatggaat tcgtcatgcc gtcgatgtac gccgtctccg tcggggtgtt cacccgccag
     1321 ctcaccaacc tgttggcgca gctcgaaaaa gccgaggcct atgcggccga gcgcaagttc
     1381 aaggtcgaca ccctggtgca ccagcggctg atctgggaca tggcgccgct gagcttccag
     1441 gtgcagaacg ccaccgatca cgccaagggc gccgcggcgc ggctgtccgg gcgcgaggtg
     1501 ccgtcatggc ccgacgacga gaagagcttc gaggacctca aggcccgcat ccgcaaggcg
     1561 ctcgatttcc tcgccaccgt gaaacccgcc gatatcgacg gcagcgagga caagccgatc
     1621 accctcaagc gcaacggcga ggattacgtg atgaacgggc aggactacct gctcggccgg
     1681 gcccagcaga atttctggtt ccacgtcacc accgcctacg acatcctgcg ccagaacggc
     1741 gtgccggtgg gcaagtccga ctacacgcgc tgatggcgcg cgccctgttc gtcgccgctg
     1801 ccgatatcct ggccgccggc gcgctcaggg gctggatcga gagcggcaac gaggtcgccg
     1861 aaatctggac ggacccgggc tttccgctcc cgggttcgca gcggacgatg agcacctggg
     1921 ctccgggctg gagcgttcgc agcctggccc ggacccacgg cattcccgcc cgcaccatgc
     1981 cggcgtcctg gcgccgctgg accggcgtga ccgaggcggt aagcggcctc gcggtggacg
     2041 tgctgatcac ctgcgtgacg atgcagatcg tgccgccggc gatcctcgac atgttcgccg
     2101 gacgcgccgt caacttccac ccggcgctgc tgcccaacta ccgcgggccg tcgccctatc
     2161 tcggcacgat cctcgatggc cgcgacgact gtgccggcgt caccctgcac gaactgaccg
     2221 cggggatcga cgagggcccg accattgcgg ccacgccggt ctcgtacgcc gcctgcggac
     2281 gccggtatcc gacgtggaag gcccggcacg ccgcggcggc aaggcgactg ggtcgtaccg
     2341 cgctgccggc attcctggcc ggcgggctgc cgtcgcgccc gcagggcgag ggcctctatc
     2401 gccgggtgcg cgaggaaatc cgcatcggcc cacagatgac cgccgccgag gcgagacgca
     2461 cggcgtcgct aatcggacgc acgggccggc tcgagatcgc cggccggcgc ggcgtgcatg
     2521 tccgagcggt caccggcgat gccgggttgc ccacgggcgc cccgccggac atcggcccgc
     2581 tatcggtgac catcgatgtg gccgatcgcc gattgcgcct
//
LOCUS       DATAZA010000363         3576 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2711482, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000363 DATAZA010000000
VERSION     DATAZA010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3576
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2711482"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..450)
                     /locus_tag="VHZ56_09225"
     CDS             complement(<1..450)
                     /locus_tag="VHZ56_09225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="HEX4298192.1"
                     /translation="MVFLPQEVIVRKRDGDVLSSGEIGQFIAGLADGSVSHAQAAAFA
                     MAVFFRDMTLGERVALTEAMRDSGTVLDWSDLDGPVVDKHSTGGVGDNVSLMLAPILA
                     ACGVYVPMISGRGLGHTGGTLDKFDSIPGYTTQPDNALFRKVTREAGC"
     gene            complement(562..2952)
                     /locus_tag="VHZ56_09230"
     CDS             complement(562..2952)
                     /locus_tag="VHZ56_09230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX4298193.1"
                     /translation="MNKLAEIFASLDYGPAPESPEPALAWLASHDNKFGHFINGKWTR
                     PGKLFASDNPATNKPLAQITDGTAADVDKAVKAARAAFPAWAALSGYERGKYLYAIAR
                     LVQKHSRLFSVLESLDNGKPIRESRDIDIPLVARHFYHHAGWAQHLEREFPGMAPYGV
                     CGQIIPWNFPLLMLAWKIAPALAAGNTVVLKPAEFTSLTALLFAEIVEKAKLPPGVVN
                     ILTGLGDTGAAIVNHPDVDKIAFTGSTEVGKLIRAATAGTGKGLSLELGGKSPYIVFD
                     DADLDSAIEGLVDAIWFNQGQVCCAGSRLLVQESIEERFIGKLKKRMATLRVGDPLDK
                     AVDIGALVAPVQVARVRDLVKQGVAEGGILYEPDLDMPKGGCFLKPALITNVSPASTV
                     VAEEIFGPVLVAMSFRTPEEAVALANNTKYGLAATIWSENINLALDIAPKLKAGVVWI
                     NGTNNFDAAVGFGGYKESGFGREGGREGMGAYLKPKWEKELKLFASPQRVVPAKAATQ
                     LAPTADLAIDQTAKMYIGGKQARPDSGYSRSVHGPAGQLLGEVGDGNRKDVRNAVEAA
                     RAALGWATTAAHARAQILYFLGENLEYRSDEFARRLRAQTGESLASAQKEVAASVERL
                     FAFAGWADKYDGAVHNPPSRMIAMAMIEPIGVIGILAPPSRPLLGSIALLAPAIAMGN
                     PVVLVPSESSPLSVTDLYQVIETSDVPAGVINIVTGGTATLAKTLAEHDGIDALWCAA
                     DAGTSAMVEKASVGNLKQTWTSRGLYYDLSDRQKFEGDYFLRRATQVKNVWVPYGA"
     gene            complement(3125..>3576)
                     /locus_tag="VHZ56_09235"
     CDS             complement(3125..>3576)
                     /locus_tag="VHZ56_09235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HEX4298194.1"
                     /translation="GLYDEIKAMRKACGEAHLKTILGTGDLATLNQVGRASLVCMLAG
                     ADFIKTSTGKEKVNATLPVSLAMIRMIRWFADETGIEIGYKPAGGISSAKTALDYMAL
                     MKEELGVHWLQPHLFRFGASSLLTDIERQLEHSLTGHYAADYRMPMV"
BASE COUNT          582 a         1145 c         1229 g          620 t
ORIGIN      
        1 gcagccggcc tcccgcgtga ccttgcgaaa cagtgcgttg tcgggctgcg tggtgtagcc
       61 ggggatcgag tcgaacttgt cgagcgtgcc gccggtatgg ccgaggccgc ggccggaaat
      121 catcggcaca tagacgccgc aggcggcgag gatcggcgcc agcatcagcg agacattgtc
      181 gccaacgcca ccggtcgagt gcttgtcgac caccggccca tcgaggtcgg accagtcgag
      241 caccgtcccg gagtcgcgca tcgcttcggt gagcgcgacg cgctcgccca gcgtcatgtc
      301 ccggaagaag acggccatgg cgaaggcggc ggcctgcgcg tggctcaccg agccgtcggc
      361 aagcccggcg atgaactggc cgatctcgcc ggagctgagc acgtcgccgt cgcgcttgcg
      421 cacgatgacc tcctgcggga ggaaaaccat cagggcggtc cgagggcgga gagcccccgc
      481 ccccggccac cggcggaaat aaactggccc ccctcccgct tgaggggagg gacggggtgg
      541 cgcttggcaa cactcaccag ttcaggcgcc atacggcacc cagacgtttt tcacctgcgt
      601 ggcgcggcgg aggaagtagt cgccctcgaa cttctgcctg tcgctcagat cgtagtagag
      661 cccacgtgag gtccaggtct gcttgaggtt gccgacactg gccttttcga ccatcgccga
      721 tgtcccggcg tcggcggcgc accacagggc gtcgatgccg tcatgctcgg cgagggtctt
      781 ggcaagggtc gcggtgccgc cggtgacaat attgatgacg ccggccggaa catcggatgt
      841 ctcgatcacc tggtagaggt cggtgaccga cagcggcgag gactcggagg gcacgagcac
      901 caccggattg cccatggcga tagcgggcgc gagcagggcg atcgagccga gcaacgggcg
      961 cgagggtggc gcgaggatgc cgatgacacc gattggctcg atcatcgcca tggcgatcat
     1021 tcggctcggc ggattgtgga cggccccatc gtacttgtcg gcccagccgg cgaaggcgaa
     1081 cagccgctcg accgaggcgg cgacttcctt ttgcgccgac gccagcgact cgccggtctg
     1141 ggcgcgcagc cggcgggcga attcgtccga ccggtattcc aggttctcgc cgaggaaata
     1201 gaggatctgg gcgcgggcgt gggcggcagt cgttgcccag ccgagcgcgg cgcgcgccgc
     1261 ctcgacggcg ttgcggacat ccttgcggtt gccgtcgccg acttcgccga ggagttggcc
     1321 agcggggccg tgaaccgacc gcgaatagcc gctgtcgggc cgcgcctgct tgccgccgat
     1381 gtacatcttg gccgtctggt cgatcgccag gtcagcggtg ggggcaagct gggtcgccgc
     1441 tttcgcgggg acgacacgtt gtggagaggc gaatagcttg agctccttct cccatttcgg
     1501 cttcaggtat gcccccatcc cctccctgcc gccctcgcgg ccgaagccgg attccttgta
     1561 gccgccgaag ccgactgcgg cgtcgaaatt gttggtgccg ttgatccaca cgacacccgc
     1621 tttgagcttc ggcgcgatgt cgagcgcgag gttgatgttc tcgctccaga tcgtcgcggc
     1681 gaggccgtac ttcgtgttgt tggcgagggc caccgcttcc tccggcgtgc ggaagctcat
     1741 tgccaccagc accggcccga agatttcctc cgcgaccaca gtgctggcgg gggagacatt
     1801 ggtgatcagc gcgggcttga ggaagcagcc gcccttgggc atgtcgaggt cgggctcata
     1861 aaggatgccg ccctcggcga cgccctgctt gacgagatcg cggacgcgcg cgacctgcac
     1921 cggggcgacc agcgcgccga tgtcgacagc cttgtcgagc ggatcgccaa cccgcagcgt
     1981 cgccatgcgc ttcttcagct tgccgatgaa acgctcttct atcgattcct gcaccagcag
     2041 gcgcgagccg gcgcagcaca cctggccctg attgaaccag atggcatcga cgaggccttc
     2101 gatggcgctg tcgaggtcag cgtcgtcgaa gacgatgtag ggcgacttgc cgccgagctc
     2161 gaggctcaac cccttgccgg tgccggcggt ggcggcgcgg atgagcttgc cgacctcggt
     2221 cgagccggtg aaggcgatct tgtcgacgtc cgggtggttg acgatggcgg cgccggtgtc
     2281 gcccaggccg gtgaggatgt tgactacgcc gggcgggagc ttggccttct cgacgatttc
     2341 ggcgaacaac agcgcggtga gcgaggtgaa ctcggcgggc ttcagcacca ccgtgttacc
     2401 ggctgccagc gccggggcga tcttccaggc gagcatcagc agcggaaaat tccacgggat
     2461 gatctggccg caaacgccat agggggccat gccggggaac tcgcgctcga ggtgctgcgc
     2521 ccagccggca tgatggtaaa aatggcgggc gacgagcgga atatcgatgt cgcggctctc
     2581 gcggatcggc ttgccgttgt cgaggctttc gagcaccgag aacagccgcg aatgcttctg
     2641 caccagccgg gcgatggcgt agagatattt gccgcgctcg tagccgctga gcgcggccca
     2701 ggccgggaac gcggcgcgcg cggctttcac ggccttgtcc acgtcggcag cggtgccgtc
     2761 agtgatctgc gccaagggct tgttggtcgc cggattgtcc gaggcgaaga gttttcccgg
     2821 cctggtccat ttgccgttga tgaaatggcc gaatttgttg tcgtgcgagg caagccacgc
     2881 cagcgccggt tcggggctct cgggcgccgg gccgtagtcg agcgaggcga agatttcggc
     2941 gagcttgttc atgtgcagtc gggctcctca cccaccaccg tcatcaccgg gctcgtcccg
     3001 gtgatccagc agcccggtgt cgaccgggcc ggaaactctt gcgctcgccg gacggctcgc
     3061 gactggatgg ccgggacagg cccggccacg acgggcggag aattgcagcc cgtcaaacga
     3121 gatctcacac catcggcatc cgataatccg ccgcataatg cccggtcaga ctatgctcca
     3181 gctgccgctc gatatcggtc agcaggctcg acgcgccaaa ccggaacaaa tgcggctgca
     3241 gccaatgcac cccgagttct tccttcatca gcgccatgta gtcgagcgcc gttttagccg
     3301 agctgatgcc tccggcgggc ttgtagccga tctcgatgcc ggtctcgtcg gcgaaccagc
     3361 ggatcatgcg gatcatcgcc agcgacaccg gcagtgtggc gttgaccttt tccttgccgg
     3421 tcgaggtctt gatgaaatcg gcgcccgcca gcatgcaaac cagcgaggcg cggcccacct
     3481 ggttgagcgt tgccagatcg ccggtgccga ggatggtctt cagatgcgcc tcgccgcagg
     3541 ctttgcgcat cgccttgatc tcgtcgtaga ggccct
//
LOCUS       DATAZA010000364         2042 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3526292, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000364 DATAZA010000000
VERSION     DATAZA010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3526292"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(99..494)
                     /locus_tag="VHZ56_09240"
     CDS             complement(99..494)
                     /locus_tag="VHZ56_09240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001637450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyltransferase/cytidyltransferase family
                     protein"
                     /protein_id="HEX4298195.1"
                     /translation="MRTVITFGTFDVFHIGHLNILSRARVLGDRLVVGVSTDALSFVK
                     KNRYPVFKQADRASIVRALFCVDEVFFEESLELKGNYIGEHRADVLVMGDDWAGRFDH
                     FGDRCEVVYLPRTENISTTDILAAVRTGL"
     gene            complement(612..1805)
                     /locus_tag="VHZ56_09245"
     CDS             complement(612..1805)
                     /locus_tag="VHZ56_09245"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family transcriptional regulator"
                     /protein_id="HEX4298196.1"
                     /translation="MARQLSVRAIMETILRRGPTSRAELAKHTGLSRQTTTQVVLELE
                     RDGWLQVSGRTQGPIGRSAPTYDLNPAAAYVLGVQLEGAAVRMALADIRGSVVLELSE
                     PTDEEGGIAVVRQVGRLFGSLLARCDVPRARVLQAAMGSPGVVDPKSGHIDIAPSIPH
                     LGEINVVEAMRHELHLPLSIENGVKLAALGELWQGAARGARDFAYIGVGIGVGMGIVA
                     DGELLRGLRGAAGEIAYLPIGADVFNPSASANGAFEDAVNSAAIVRRYEAYGGQPGLK
                     VADVFAALRSGDSRAVAAIEETARIVVLGISAVRAVLDPELVILGGSVGRRPEMVDHI
                     RTFMARAAMADLPVHPSILADRAPLVGALGEALNRLHAGLFGAQSVRPEISLTKLVGA
                     TSEGN"
     gene            complement(1860..>2042)
                     /locus_tag="VHZ56_09250"
     CDS             complement(1860..>2042)
                     /locus_tag="VHZ56_09250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HEX4298197.1"
                     /translation="FDFGFAVDWMRKDLSIVLGEARQNGARLPLTALVDQFYAEVQGM
                     GGKRWDTSSLLARLER"
BASE COUNT          354 a          697 c          681 g          310 t
ORIGIN      
        1 cgcatggccg gaccgtgcga ggcgttcagg ctgcggatca gccggtagtt cttggtgagc
       61 ttcgcagcca aatcggaacc cgcgttcacc ccgaaggatc agagtcctgt ccgcacggcg
      121 gccaatatgt cggtggtgga aatgttctcg gtgcgcggca gatagaccac ttcgcaccgg
      181 tcgccaaaat ggtcgaaccg gccggcccag tcgtcaccca tcaccagcac gtcggcccgg
      241 tgctcgccga tatagttgcc cttgagctcg aggctttcct cgaagaacac ttcgtcgacg
      301 caaaacaggg cgcgaacaat actggcgcga tcagcctgct tgaacaccgg atagcggttc
      361 ttcttgacaa aactcagtgc gtcggtcgaa acgccgacca ccaggcggtc ccccagcacc
      421 cgggcacgcg acagaatatt gaggtggccg atgtgaaaaa catcgaacgt tccgaaggtg
      481 atgacggtcc gcatcgttga tttccatgcg cctgcctgac ctctgacgat accaagcaag
      541 aggcaagtaa cgcaatggag cggcatgtaa atcgcgagac ggggcgaagg cgggcgcacg
      601 gcgcggtccg ctcagttgcc ttctgacgtg gccccgacga gcttggtcaa cgagatttcg
      661 gggcggaccg attgcgctcc gaacaggccc gcatgcagcc ggttgagcgc ttcgcccagc
      721 gcgccgacga ggggcgcccg gtcggcgagg atgctcggat gcaccgggag atcggccatg
      781 gcggcgcgcg ccatgaacgt cctgatgtgg tccaccattt cgggccggcg tccgacgctg
      841 ccgccgagga tgacgagctc cgggtcgagc acggcgcgga ctgccgagat gccgagcacg
      901 acaatgcgtg ccgtctcctc gatggccgcc acggcgcggc tgtcgcccga gcgcaacgcg
      961 gcaaaaacgt cggcgacctt gaggcccggc tgtccgccat aggcctcgta gcgccgaacg
     1021 atcgccgcgc tgttgacggc gtcctcgaat gcgccgttcg cggacgccga gggattgaac
     1081 acatcggcac cgatcggcag gtaggcgatc tcgccggcgg cgccgcgcag gcccctgagc
     1141 aattcgccgt cggcgacgat gcccatgccc acgccgatgc cgacgccgat ataggcaaag
     1201 tcgcgggcgc cgcgcgccgc gccctgccac agctcgccca gggccgccag cttgacgccg
     1261 ttctcgatcg aaagcggcag gtgcagctcg tgccgcatcg cctcgacgac gttgatctcg
     1321 cccaggtgcg gaatgctcgg ggcgatgtcg atgtgaccgg atttgggatc gacgacgccg
     1381 gggctgccca tcgccgcctg cagcacgcgg gcgcgcggca cgtcgcaccg ggcgagcagc
     1441 gagccgaaca ggcgaccgac ctgccgaacg acggcgatgc cgccttcttc gtcggtcggc
     1501 tcgctcagtt cgagcacgac cgagccgcga atatcggcca gcgccatgcg cacggccgcc
     1561 ccttcgagct gcacccccag cacataggcg gcggccgggt tcagatcgta ggttggcgcg
     1621 ctgcggccga tcggcccctg ggtgcgcccg ctcacctgca gccagccgtc gcgctcgagt
     1681 tcgagcacaa cctgcgtcgt cgtctggcgc gacaggccgg tgtgcttggc aagctccgcc
     1741 cgcgaggtcg ggccgcgccg caggatggtc tccatgatgg cgcgaaccga gagttgccga
     1801 gccaccgggg gcagctgcgg ccgtcgcacc ggctccactg tttccaccgg tccggccaac
     1861 taccgctcga gccgggcgag caggctcgag gtgtcccagc gcttgccgcc catgccctgc
     1921 acctcggcgt agaactggtc gaccagcgcg gtgagcggca atctggcgcc gttctgccgc
     1981 gcctcgccga gcacgatcga gaggtccttg cgcatccagt cgacggcgaa gccgaaatcg
     2041 aa
//
LOCUS       DATAZA010000365         5390 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1667590, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000365 DATAZA010000000
VERSION     DATAZA010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5390
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1667590"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..924)
                     /locus_tag="VHZ56_09255"
     CDS             complement(61..924)
                     /locus_tag="VHZ56_09255"
                     /inference="COORDINATES: protein motif:HMM:NF019128.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall hydrolase"
                     /protein_id="HEX4298198.1"
                     /translation="MRAKALSRALLKLLALGAAALMAAAIATPSRADDLTLAYVTPAE
                     LTPQLAASRTAPPVTGLRPSFAVQPQLTNDLLASYVAKQQAVKLQLDNFNVAPQPELT
                     EQVLLGYIDRTHGQNLALDAINSIASAPALNDKLLQNWATSKFVPTVKKVQFSNSEKL
                     CLTEAIYHEARGEPDTGQWAVANVIINRAMSHKFPTTMCGVVYQNADQGYLRCQFTFA
                     CDGKSDLGTEQGAWAKASKMASAAYHEFQSGERPGVVPSDALYYHTLSVDPGWNLRRV
                     AVIGAHEFYAD"
     gene            1267..2262
                     /locus_tag="VHZ56_09260"
     CDS             1267..2262
                     /locus_tag="VHZ56_09260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298199.1"
                     /translation="MPAPSRTRLYAATPDGTRLPVIDITDPAFAIPASDAEIEALAAA
                     ALREEERRGPLQQALIALALRVFARRSRLLAGLQAANTGFLSGIPTYVLKLGPANLVP
                     PYDGRIDREVVKSPLVAGMRIRLHQVAGLLADALAPRLAADPAAPLHLVEIAGGPSAD
                     ALNALILLNARGLLGQRAVRIAIYDIDSDGPAFAAAMLAALQAGPLAGRDIAIAHVPG
                     NWSDTAALARLLADIPPAAILAATSEGGLFEYGSDTDISGCLEALAPRVPIVTGSVTR
                     NDRLNQLIRRHSGARVVMRGLERFAAIVAPTGYAIARSRPSPLSDQVLLTRAPAA"
     gene            complement(2229..2972)
                     /locus_tag="VHZ56_09265"
     CDS             complement(2229..2972)
                     /locus_tag="VHZ56_09265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HEX4298200.1"
                     /translation="MARDGEAPYMAAMARVQLRPFSAVVFDMDGTLLDTEMVFKQIVW
                     EVAGNLGFAMTDDVHGRMVGSSHETTNRLLVEAYGAAFPYEIFDAECRRIMHGRMAEA
                     VPVKPGVPELLAELKARRIPMAVATSSRAPHALTHLGTAGLLDLFQAVVTRDDVVRPK
                     PHPEPYLTAARLLGVKPGDCLAVEDSSSGVRAAHDAGMQTVMVPDLVPPSPELRALCA
                     AVLGSLHELREAAFGRESVQAAGARVSST"
     gene            complement(2986..3591)
                     /locus_tag="VHZ56_09270"
     CDS             complement(2986..3591)
                     /locus_tag="VHZ56_09270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298201.1"
                     /translation="MPHKSLIFALATALLLAPVAARADSDLAAYDAARQALLVIWAGM
                     PLTIRNATLTEREPAGYGDYAARDGNSYAPGDTIHVYAEVLGYGWRDNGDGTVSKLLD
                     ADLSLLNANGDVVASKQKFLSTDARSRQKLMESDLAFNITLSAFAPGDYKLRFAVHDR
                     AGNKDASFDLPVTLVAGPASSAPPDAASAPSSEASSSSAAD"
     gene            3751..4008
                     /locus_tag="VHZ56_09275"
     CDS             3751..4008
                     /locus_tag="VHZ56_09275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298202.1"
                     /translation="MASMNAIILIVSVVVPLLPVVMFPTKLIGRGGLRTFIGAALLVG
                     VMMLLYFGLQSFITDPGLDQSDAAAASGLSDADMSALQKLL"
     gene            complement(4022..4285)
                     /locus_tag="VHZ56_09280"
     CDS             complement(4022..4285)
                     /locus_tag="VHZ56_09280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007752108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2171 domain-containing protein"
                     /protein_id="HEX4298203.1"
                     /translation="MTNLADIKEHMDVIGADGVHVGTVDRVENGRIKLVRDDSGEGAH
                     KGHHHYISGNFVADVEGDEVRLSANGDVAVEHETEADGNAAVN"
     gene            complement(4371..4790)
                     /locus_tag="VHZ56_09285"
     CDS             complement(4371..4790)
                     /locus_tag="VHZ56_09285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013843882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1810 domain-containing protein"
                     /protein_id="HEX4298204.1"
                     /translation="MTDLDAERFLAAQAPVYDTVVAELGAGRKPTHWMWFVFPQLAAL
                     GHSPTAQFYGLADLAAAEAYIAHPVLGPRLLACTELVNGVEGRSAHAIFGTPDDLKFR
                     SSLTLFQRAAPGEAAFPAALGKYYDGVADAATLRLIG"
     gene            4926..>5390
                     /locus_tag="VHZ56_09290"
     CDS             4926..>5390
                     /locus_tag="VHZ56_09290"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX4298205.1"
                     /translation="MRIFAALALVALLGSLPAIAPALADEQVSFPSAASSASAAVAIT
                     GELSRPAGTGPFPAVVLLHSCLGYPSNRHAVEDRLAASGYVALFVDDFAARGLSQTCL
                     VDFPEALADAFGALAYLAGRPDIDPARIAAVGFSQGGDTALAIASTHPAFAVP"
BASE COUNT          770 a         1997 c         1725 g          898 t
ORIGIN      
        1 ccccgaaacg aaaaatccgg cgccaggccg gattttcgaa ggtccaatca ggaaccgggg
       61 tcagtcggcg tagaactcgt gcgcgccgat caccgctacg cgtcgcaggt tccagcccgg
      121 atcgaccgac agcgtgtggt agtagagcgc gtcgctgggc accacgcccg gccgctcgcc
      181 cgactggaac tcgtggtagg cggccgatgc catcttgctg gccttcgccc aggcgccctg
      241 ttccgtgccg aggtccgatt tgccgtcgca ggcgaaggtg aactggcagc gcagatagcc
      301 ctggtcggcg ttctggtaca ccacgccgca catcgtggtc gggaatttgt gcgacatcgc
      361 ccggttgatg atgacgttgg ccaccgccca ctggccggtg tccggctcgc cgcgcgcctc
      421 gtgatagatc gcctcggtca ggcagagttt ctccgagttg gagaattgca ccttcttgac
      481 cgtcggcacg aatttgctgg tcgcccagtt ttgcagcagc ttgtcgttga gggccggcgc
      541 gctggcgatc gaattgatcg cgtcgagcgc caggttttgc ccatgcgtgc ggtcgatata
      601 gcccagcagc acctgctcgg tgagctccgg ctgcggtgcg acgttgaaat tatcgagttg
      661 cagcttcacc gcctgctgct tggcgacgta gctggccagc aggtcgttgg tgagctgtgg
      721 ctgcacggca aagctcgggc ggaggccggt gaccggcggc gccgtccgcg acgcggccag
      781 ctgcggcgtc agttcggcgg gcgtcacgta agcgagggtg aggtcgtcgg cacgagaggg
      841 agtggcaata gccgccgcca tgagcgccgc agcgcccagg gccagcagtt tcagcagcgc
      901 gcgagacagc gctttcgccc tcaatccccc gtccttcccc cgaagccacc ccgacggcgg
      961 caccggctct tggccgtttt cccgtgggca ccctagacga gctttcccac ggaggaaacc
     1021 ggaatttacc aggttttaac catacatctt aggtccctaa ggcgaggtta acgggcccgc
     1081 ggcctacggg aaagccctga atcccgaggc acttggccgt ggtcacccgg tggttgccgg
     1141 atcgcatcat agttaattca aattgcgccc gtgtccggcc cgcaacagcc gcgccaaact
     1201 ggcgctgcgt cccgcccctg tggtagttcg gcaggccggt gaccctgacc tgccactgga
     1261 gcgtccatgc ccgcgccgtc ccgcacccgc ctctatgccg cgacgcccga cggcacgcgc
     1321 ctgccggtga tcgacatcac cgacccggcc ttcgccattc ccgcttccga tgccgagatc
     1381 gaggcgctcg ccgccgccgc cttgcgggag gaggagcggc gcggcccgct gcagcaggcc
     1441 ctgatcgccc tggcgctgcg agtgtttgcc cgccgctccc ggctgctcgc cgggctgcag
     1501 gccgccaata ccggcttctt gtccggcatt ccgacctatg tgctgaagct cggtccggcc
     1561 aatctggtgc cgccctatga cggccggatc gatcgcgagg tggtgaaaag cccgctcgtc
     1621 gccggcatgc gcatccgtct ccaccaggtg gcgggcctcc tcgccgacgc gctggcgccg
     1681 cgccttgccg ccgatccggc ggcgccgctc cacctcgtcg agatcgccgg cgggccctcg
     1741 gccgacgcgc tcaacgcgct gatcctgctc aacgcccgcg ggctcttggg ccagcgggcc
     1801 gtccgcatcg ccatctacga catcgattcg gacggcccgg ccttcgccgc cgccatgctc
     1861 gccgcgctgc aggccggccc gctcgccggc cgcgacatcg ccatcgccca cgtccccggc
     1921 aactggtccg acaccgccgc gctggcgcgc ctccttgccg acatcccgcc ggccgccatc
     1981 ctcgccgcca cctcggaggg cggtttgttc gaatacggct ccgataccga catttccggc
     2041 tgcctcgagg cgctggcgcc gcgcgtcccg atcgtcaccg gctcggtcac ccgcaacgac
     2101 cgcctgaacc agctgatccg gcgccacagc ggcgcccgcg tcgtcatgcg cgggctcgag
     2161 cgcttcgccg ccatcgtcgc gccgaccggc tacgccatcg cccgctcgcg gccatcgccg
     2221 ctgagcgatc aggtgctgct gacccgcgcc cctgcggcct gaaccgattc gcgcccgaac
     2281 gccgcctcgc gcaattcgtg caggctgccg agcaccgcgg cgcagagcgc ccgcagttca
     2341 ggggagggcg gcacgaggtc gggcaccatc accgtctgca tgccggcatc gtgcgccgcc
     2401 cgcacccccg aggacgaatc ctcgaccgcg aggcaatcgc ccggcttcac gccgagcagc
     2461 cgggcggccg tgaggtacgg ctccggatgc ggcttgggcc gtaccacgtc gtcgcgcgtc
     2521 accaccgcct gaaacaagtc gagcagcccg gccgtgccca gatgcgtcag cgcgtgcggc
     2581 gcccgcgacg aggtcgccac cgccatcggg atgcgccgcg ccttgagctc ggcgagcagc
     2641 tccggcaccc ccggcttcac cggcaccgcc tcggccatcc gcccgtgcat gatccgccgg
     2701 cattcggcat cgaagatctc gtacgggaac gccgcgccat acgcctcgac cagcagccgg
     2761 ttggtggttt cgtggctcga gccgaccatc cggccgtgca cgtcgtcggt catcgcgaaa
     2821 ccgaggtttc cggcgacttc ccagacgatc tgcttgaaca ccatctcggt gtcgaggagc
     2881 gtgccatcca tgtcgaagac gacggccgaa aaaggtcgga gctgaacgcg ggccatggcc
     2941 gccatatagg gcgcttcgcc gtcacgcgcc accggagcct tcggcctagt ccgccgcgga
     3001 cgacgacgag gcctcggagg agggcgccga tgcggcgtcc ggcggcgccg agctggccgg
     3061 ccccgccacc agcgtcaccg gcaggtcgaa gctcgcatcc ttgttgccgg cgcggtcgtg
     3121 caccgcaaag cgcagcttgt agtcgcccgg cgcaaaggcg ctgagcgtga tgttgaaggc
     3181 gaggtcggat tccatcagct tctggcgcga ccgcgcgtcg gtgctgagga atttctgctt
     3241 gctcgccacc acgtcgccat tggcattgag caggctcaga tcggcgtcga gcagcttcga
     3301 taccgtgccg tcgccattgt cgcgccagcc atagcccagc acctcggcat agacatggat
     3361 ggtgtcgccc ggcgcgtagc tgttgccgtc gcgcgccgca taatcgccgt agccggccgg
     3421 ctcgcgctcg gtcagggtgg cgttgcggat ggtcagcggc atgccggccc agatcaccag
     3481 cagcgcctgc cgcgccgcat cgtaggcggc aaggtcggaa tccgcccgcg ccgccaccgg
     3541 agccagcagc agcgccgtcg ccagggcaaa aatcagcgat ttgtgcggca tcgcaggcct
     3601 ccggtgggcg gtccgagctt aggcaccgcc tctatcggcg gcaagcgcgc tcaaaagatg
     3661 gccgtcgccc gtcccccgat ccaccggtaa accgcctcgc tcaaattgcg ccgatcggcc
     3721 gccgccttcg ttcacgcctc cggcggcatc atggcgagca tgaacgccat catcctcatc
     3781 gtcagcgtcg tcgtgccgct cctgcccgtg gtgatgtttc ccaccaagct catcggccgc
     3841 ggcgggctgc gcaccttcat cggcgcggcg ctgctggtgg gcgtgatgat gctgctctat
     3901 ttcggcctgc agagcttcat caccgatccg gggctggacc aatccgatgc cgcggccgcc
     3961 tccggcctca gcgacgccga catgtcggcg ctgcagaagc tgctctgaag ccgtatcgcc
     4021 gctagttcac cgccgcgttg ccgtcggctt cggtttcgtg ctcgaccgcc acgtcgccat
     4081 tggcgctgag ccgcacctca tcgccttcga cgtcggcgac gaaattgccc gaaatgtagt
     4141 ggtggtggcc cttgtgggcg ccttcgccgc tgtcgtcgcg aaccagcttg atgcggccgt
     4201 tctcgacccg gtcgacggtg cccacatgca cgccatcggc gccgatcacg tccatatgct
     4261 ccttgatgtc ggcaagattg gtcatcgtgt tctcctctgt gtggcaggga gaacgcgcgg
     4321 ccggcccgga aagatgcctc gcccgcggcg cgcggtacag gatcgctcgt tcagccgatc
     4381 agccgcagcg tcgccgcgtc cgcgaccccg tcgtagtatt tgccgagtgc cgccggaaac
     4441 gctgcctcgc ctggcgcggc gcgctggaac agcgtcagcg acgagcggaa cttcaggtcg
     4501 tcgggcgtgc cgaagatcgc gtgcgcgctc cgcccttcca ccccattcac cagctccgtg
     4561 caggccagca gccgcggccc cagcaccggg tgcgcgatat acgcttctgc cgccgcgagg
     4621 tcggcaagcc cgtagaactg cgccgtcgga ctgtgcccga gtgcggccag ttgcgggaac
     4681 acgaaccaca tccagtgcgt gggtttccgc cccgcgccca gctcggccac gaccgtgtcg
     4741 taaaccggcg cctgcgccgc gaggaaccgc tcggcatcga gatcggtcat ggcgtcggtc
     4801 tttcaattgc gcgatgggca ggccgagcat agcccgacgg cacgtcgccg caacgccctc
     4861 gcgagcttga ccgcgccgcc gcaaccgcag aaccttgttc catcgacgcc atgccggacc
     4921 gcccgatgcg catcttcgcc gcccttgctc ttgtggccct cctgggctcg ctccctgcca
     4981 tcgctccggc acttgccgat gaacaggtga gcttccccag cgccgcgtca tccgcttccg
     5041 ccgccgtcgc cattaccggc gagctcagcc ggcccgccgg caccgggccg tttccggccg
     5101 tcgtgctgct ccactcctgc ctgggctatc cctcgaaccg gcacgccgtc gaggaccggc
     5161 tcgccgcgtc gggctacgtc gcgctgttcg tcgacgattt cgccgcccgc ggcctgagcc
     5221 agacctgcct cgtcgatttt ccggaagcgc tggccgacgc tttcggcgcg ctcgcctatc
     5281 tcgccggccg ccccgacatc gacccggcac ggatcgccgc ggtgggcttt tcgcagggcg
     5341 gcgacaccgc gctggccatc gcctccaccc accccgcttt cgccgtcccg
//
LOCUS       DATAZA010000366         2935 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3062969, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000366 DATAZA010000000
VERSION     DATAZA010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2935
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3062969"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..1266)
                     /locus_tag="VHZ56_09295"
     CDS             complement(106..1266)
                     /locus_tag="VHZ56_09295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298206.1"
                     /translation="MPTTTLDRPPASAGADTGIIRPFAAPDAGAVADLLVRAFQGTDG
                     PAPAAMAAYLIELYLDAPWFDPELAARVLVRADGRVVGFIGVSALPMTLDGRPIRTAV
                     LSSLAVDPRVGDPMIGPRLLRDVRAGPQDAMLNDRSNPVAVTLLRSLGAETIRDYGYD
                     WIRSLRPAGFALEMLASRFGAARLLAPLARPLDNRALRAARAADERRWTAPGRSRSAE
                     ALIDRPAATNELLELIPKLLERFTLRPDWTASALATVLADAARKSDLGTYSARIVGTP
                     DGRPLGLYLMHIQPHRHASVLQLMSTPGREGVVLDRAIAYATECGAVAIRGRAQPDFL
                     DALAERRAVLVPQLATVVHARDKAVLETFRNGTAFFTGLAGENWMRLNGDRF"
     gene            complement(1345..1701)
                     /locus_tag="VHZ56_09300"
     CDS             complement(1345..1701)
                     /locus_tag="VHZ56_09300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011160120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298207.1"
                     /translation="MTPRTMLRILAWLLLLGLAIVTLGPIQVRPITPFPVTIERSGGL
                     AIIGFVFALAYPRHLVLVGLLLIGASALLEALQVLEPSRHGRVVDFLVKAAGAVIGLG
                     AGWLVARAAERRQRAG"
     gene            complement(1698..2657)
                     /locus_tag="VHZ56_09305"
     CDS             complement(1698..2657)
                     /locus_tag="VHZ56_09305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298208.1"
                     /translation="MSVARFIAGSIRGVVVAAATSTAALGLLVVLHPFAAATPVVAGT
                     ADSATADALHARIDALRASLHGIETSLDAAAGSPPAPAAGTQHGQLDARIAAAIDRRD
                     LVVRSATAIRDALQTGAPISSLAGIRDSAVIAQLTAQEAALDAQIVEQGARLRPAHPT
                     MRALAAQRSSLGGQVKAEAASVADALEAEARADDAQVKLLQSQVAASPAPTVSPATDT
                     ASLQAEAASERTQIDSLTDDYFNLRPSATSPATRVAGFLTPLNLFVAGIAGIAALVFQ
                     VALAVGRRPRPDDLAGWRADDDPEAAPAPETGEPEPVGLRRAS"
BASE COUNT          462 a          933 c         1136 g          404 t
ORIGIN      
        1 ggggcaggca gcgaaaaacg cccggagcct ccggcccttc ggacggtaag cttaaacggt
       61 atggttaatc gcttcaggtc gattggaagt tgattccaat tggactcaaa agcgatcgcc
      121 gttgagccgc atccagttct cgccggcgag accggtgaag aacgcggtac cgtttcggaa
      181 cgtctcgagc acggccttgt cgcgggcgtg aacgaccgtg gcgagctgcg gaaccagcac
      241 ggcgcgacgc tccgcgaggg cgtcgagaaa atcgggctgg gcgcggccgc ggatggcgac
      301 ggcgccgcac tcggtcgcat acgcaatggc ccggtcgagc acgacgccct cgcgtcccgg
      361 ggtgctcatc agctgcagca cgctggcgtg gcggtgaggc tggatgtgca tcagatagag
      421 gccgagcggg cggccgtccg gggtgccgac aatacgggcg ctgtaagtgc caaggtcgga
      481 cttgcgggca gcgtcggcca gtacggtggc gagggcggac gcggtccagt ccggccgcag
      541 cgtgaagcgt tcgaggagtt tcgggatcag ctcgagcaac tcgttggtcg ccgccggccg
      601 gtcgatgagg gcttcggcgc tgcgcgagcg gccgggggct gtccagcggc gctcatcggc
      661 agcccgcgcg gcgcgcaggg cgcggttgtc gaggggtcgc gccagcggcg cgagcaggcg
      721 ggctgcgccg aagcggctcg ccagcatctc aagtgcgaag ccggccgggc gcaggctgcg
      781 gatccagtcg tagccgtagt cgcggatcgt ttcggcaccg agcgagcgga ggagggtcac
      841 ggcgacgggg ttcgaacggt cgttgagcat ggcgtcctgc ggtccggcgc ggacgtcgcg
      901 cagcagccgc gggccgatca tcggatcgcc gacgcgcggg tcgacggcaa gcgaggacag
      961 cactgctgtg cggatggggc ggccatcgag ggtcatcggc agggccgaga cgccgatgaa
     1021 gcccacgacg cggccgtcgg cgcgcaccag gacacgcgcc gcgagttcgg ggtcgaacca
     1081 tggcgcgtcg aggtagagtt cgatcaggta ggcagccatc gccgccgggg ctggcccgtc
     1141 cgtcccctgg aaggcgcgca ccagcaggtc agccacggcg cccgcgtccg gtgcggcgaa
     1201 cggccggatg atgccggtgt ccgcgccggc gctggccggg gggcgatcga gggtcgtggt
     1261 gggcatagaa cgccaggcta ggaaatggtc cgcccatagt aacgagcggc ccggtggcgg
     1321 cgcgcggcaa ttccgccgat atgtttaacc ggcgcgctgc cggcgttcgg ccgcccgggc
     1381 gacgagccag ccggcaccaa gaccgatcac cgcaccggcg gccttgacga ggaaatcgac
     1441 gacgcggccg tgacggcttg gctcgagcac ctgcagggcc tcgagcaggg cgctggcgcc
     1501 gatcagcagc aggccgacca gcacgaggtg gcgcggatag gcgagcgcaa acacaaaacc
     1561 gatgatcgca aggccgcccg agcgctcgat ggtcaccggg aatggcgtga tcggccggac
     1621 ctggataggc cccagcgtca cgatggcgag gccaagcagc agtagccagg cgagaatgcg
     1681 cagcatggtt cgaggggtca cgaggcgcgc cgcaaaccga caggttctgg ctcgccggtc
     1741 tcgggcgcgg gggcggcctc cggatcgtcg tcggcccgcc agccggcaag atcgtcgggg
     1801 cgcggccggc ggccgaccgc gagcgccacc tggaatacca gcgctgcaat accggcgatg
     1861 ccggcgacaa acaggttgag cggggtaagg aacccggcga ccctggtggc agggctcgtg
     1921 gccgatggac gcaaattgaa atagtcgtcc gtcaggctgt cgatctgcgt ccgctcgctg
     1981 gcggcttcgg cttgcagcga agcggtgtcg gtcgcggggg acacggttgg tgcaggggac
     2041 gcggcgacct gcgactggag gagcttgacc tgcgcgtcgt cggcgcgcgc ctcggcctcg
     2101 agggcgtcgg cgacgctggc cgcttcggcc ttgacctggc caccgagaga cgatcgctgg
     2161 gcggcgaggg cccgcatcgt cgggtgggcc ggcctgagcc gcgcaccttg ctcgacgatc
     2221 tgcgcatcga gcgccgcctc ctgggccgtc aactgggcga tgaccgcgct gtcgcggatg
     2281 ccggccaggg acgagatcgg cgcgccggtc tgcagggcat cgcggatggc cgtggcgctg
     2341 cggacgacga ggtcccggcg gtcgattgcg gcggcgatcc gggcgtcgag ctgcccgtgc
     2401 tgcgttcccg cggccggcgc tggcggactg cccgccgccg catcgaggga cgtttcgatc
     2461 ccgtgcagcg aggcgcggag ggcgtcgatg cgcgcatgca gcgcgtcggc ggtcgcgctg
     2521 tcggcggtgc cggcgacgac cggcgtcgcg gcggcgaaag gatgcagcac gaccagcagc
     2581 ccgagcgcag ccgtgctcgt ggcggcggcg accaccacgc cacggatcga tccggcgata
     2641 aaacgggcaa cggacatcgg ccgactatcg cgacgtcagc gtaagcattc ggttaagcgg
     2701 ctcgcattcg gcgagccagc gaccggcggt tcagcggaaa ttaaccatga ccgccgacac
     2761 tgaggcctgc tcgcgctcct cccgcgggtg cgtacgtcga gagttgccat gcgttggttt
     2821 gcgttgttcg tgccgctgct gttcgccgtg ctgagcggct gtgcgatgaa ccgggttacg
     2881 gcctacaaca ccgttgtgcc ggcgcagtac acgctcgaca ccggcgacgt ggtgc
//
LOCUS       DATAZA010000367         2273 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3527285, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000367 DATAZA010000000
VERSION     DATAZA010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3527285"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /locus_tag="VHZ56_09310"
     CDS             <1..285
                     /locus_tag="VHZ56_09310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007529932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance MFS efflux pump"
                     /protein_id="HEX4298209.1"
                     /translation="GGIGTPALQSLATRQVDESKQGAFQGVLASVVSLASIVAPLGFS
                     SLYFLVRAQWPGAMWLSVVVLYAMIVPLVLRLRLNGANAAMASATTAPPG"
     gene            complement(438..514)
                     /locus_tag="VHZ56_09315"
     tRNA            complement(438..514)
                     /locus_tag="VHZ56_09315"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(478..480),aa:Arg,seq:acg)
     gene            complement(585..2018)
                     /locus_tag="VHZ56_09320"
     CDS             complement(585..2018)
                     /locus_tag="VHZ56_09320"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX4298210.1"
                     /translation="MSSEPRAMPGPFSGLSVKLIATITLVILAVEVVIYLPSAGNYRE
                     AWLGDQLRIGIVAARVLDAVPDVMNLPAMLTDNLLHSAGAIAIVYRRNGQSQLIELED
                     KPMPREAVTVDMRQTDYPTLIMGAIDTLTHNGDRVLRILGNSDGGDASAEVEVLMDEA
                     PLRAALLGYSWNIVLVSLLVAVLTAAVLYLLVSRLLIVPIRRLTGNMVAYRMAPENAA
                     LIISPTRRKDEIGIVENELAAMETDIFSMLRQRRHLADLGLAVAKINHDLRNTLTSAQ
                     LLSDQVVALDDPKIQRLAPRLVQSIDKAVAFAQSVLDYGRQSGTPPRPVPVDLRALID
                     ESAIDAGAMRHPDIAFDNQVPDGISIRVDPEQLARVLVNLLRNAREAIEATPDRPARP
                     AIAASFAETAAGLDIAISDNGPGLPPRARENLFVAFEGSAKAGGTGLGLAIARELVMA
                     HGGTMSYEPLTPGTRFVIHFPAAIRLA"
     gene            complement(2045..>2273)
                     /locus_tag="VHZ56_09325"
     CDS             complement(2045..>2273)
                     /locus_tag="VHZ56_09325"
                     /inference="COORDINATES: protein motif:HMM:NF014860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298211.1"
                     /translation="GHILGAGIVGAGAAELAALFAFAMDQRIEVARLAELAAPYPSHA
                     ELARILGEQALAGTGRARLAARRFALNRLLP"
BASE COUNT          352 a          729 c          838 g          354 t
ORIGIN      
        1 ggcggcatcg gcacaccggc cctgcagtcg ctggcgaccc ggcaggtgga cgagagcaag
       61 cagggcgcgt tccagggcgt cctcgcctcc gtggtgagcc tcgcatcgat cgtcgcgccg
      121 ctcggtttct cgagcttgta cttcctcgtg cgggcgcagt ggccgggggc gatgtggctg
      181 tcggtcgtcg tcctctacgc gatgatcgtg ccgctggtcc ttcggctgcg gctgaacggg
      241 gccaatgcgg cgatggcctc ggcgacaacc gctccgcctg gatgacaatg tcgtgcgaac
      301 gcccggcggg caaggcgatg ggttcgtcct gcatgcctcg gctgcaacgg cgctcggcga
      361 ccatcggacg tcacgcgaag cgatgcggcc cgtgaggtcc tgaggcccgt gcgcgggtgc
      421 atcgcagatg gtgagaatgg cgcgcccgga gcgattcgaa cgcccgaccc ccagattcgt
      481 agtctggtgc tctatccagc tgagctacgg gcgcctgccc tcaacggccc tgaggccgga
      541 agcgggccac ccatacacag gccgccgtgg cttgtccagc gcggctaggc cagccggatt
      601 gcggcgggaa aatggatgac aaagcgcgtg cccggggtga ggggctcgta gctcatggtg
      661 ccgccatgcg ccatcaccag ttcgcgggcg atggcgaggc caagcccggt gccgccggcc
      721 ttggccgagc cctcgaaagc cacgaacagg ttctcgcggg cgcgtggcgg caggccgggc
      781 ccgttgtccg aaatggcgat atcgaggccg gcggcggttt cggcaaagct ggcggcgatc
      841 gcagggcgcg ccggcctgtc gggtgtcgct tcgatggcct cgcgggcgtt cctgagcagg
      901 ttgaccagca cccgcgccag ctgctcgggg tccacccgga tcgagatgcc atccggcacc
      961 tgattgtcga aggcgatgtc ggggtggcgc atggcgccgg catcgatcgc cgattcatcg
     1021 atcagggcgc gcaggtccac cggcaccggc cgcggcggag tgccggactg gcgaccgtag
     1081 tccagcaccg actgggcgaa ggccacggcc ttgtcgatcg actgcaccag ccgcggcgcg
     1141 aggcgctgga tcttgggatc gtcgagcgcc accacctggt cggagagcag ttgcgcggag
     1201 gtcagggtgt tgcggaggtc gtggttgatc ttggcgacgg cgaggccgag gtcggcaaga
     1261 tggcggcgct gccgcagcat ggagaagatg tcggtttcca tcgccgcgag ctcgttttcg
     1321 acgatgccga tctcgtcctt gcggcgggtc ggcgaaatga tcagcgccgc gttttccggc
     1381 gccatgcggt aggcgaccat gttgccggtg aggcggcgga tcggaacgat cagcagccgg
     1441 ctgaccagca gatagagcac ggcggcggtc agcacggcca ccagcagcga caccaggacg
     1501 atgttccacg aatagccgag cagcgcggcg cgcagtggcg cctcgtccat cagcacctcg
     1561 acctcggccg aggcgtcgcc gccgtcggaa ttgccgagga tgcgcagcac ccggtcgcca
     1621 ttatgggtca gggtgtcgat ggcgcccatg atcagcgtcg ggtagtcggt ctggcgcata
     1681 tcgacggtca ccgcctcgcg cggcatcggc ttgtcctcga gctcgatcag ctggctctgg
     1741 ccgttgcggc gatagacgat ggcgatggcg ccggccgaat gcagcaggtt gtcggtgagc
     1801 atggcgggca ggttcatcac gtcgggcacc gcgtcgagga cgcgcgcggc gacgatgccg
     1861 atccgcaact ggtcgccgag ccaggcttca cggtaattgc cggcggacgg caggtagatc
     1921 accacctcga ccgcgaggat caccagcgtg atcgtggcga tcagcttgac ggagagcccg
     1981 gaaaacggcc cgggcatggc acggggctcg ctgctcatct tccgcgttct ttactggcaa
     2041 acgcctaggg caacaagcgg ttgagggcaa atcgccgcgc cgcgagccgg gctcggccgg
     2101 ttcccgcgag cgcctgctcg ccgaggatgc gggccagctc ggcatggctc ggatagggcg
     2161 cggcgagctc ggccagccgc gcgacctcga tccgctggtc catggcaaag gcgaagagcg
     2221 cggcgagctc ggcggcgccg gcgccaacga tcccggcacc caggatgtgg ccg
//
LOCUS       DATAZA010000368         2404 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_972815, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000368 DATAZA010000000
VERSION     DATAZA010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_972815"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..938)
                     /locus_tag="VHZ56_09330"
     CDS             complement(<1..938)
                     /locus_tag="VHZ56_09330"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX4298212.1"
                     /translation="MAPIADKGRAAGRVAARLRATTAILPGRIMTDPLMTYAYAGDAS
                     QYRLVPAIVVIVNSEDEVRAVIAAARAESLPLTFRAAGTSLSGQSNSDGVLAVLGDGF
                     RKMQVLDGGERIVLGPAIIVAQANRALKPFNRKLGPDPASQATCKIGGVVNNNSSGMC
                     CGVAYNTYHTLDRLRLLLLDGTVLDSGDPASVAAFRASHAALLEGLHRLHHEVMADAG
                     LVALIRHKYRIKNTVGYSINALVDFDDPIDILAHLIVGSEGTLGFVSEVTYRTIPEHP
                     FKLTGLIPFPDPHSCARAISLLANRGVQSTTGVTAA"
     gene            complement(1025..1231)
                     /locus_tag="VHZ56_09335"
     CDS             complement(1025..1231)
                     /locus_tag="VHZ56_09335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298213.1"
                     /translation="MWWHADIGPDASARPDPSSAGNRPAEATIPDPAATTPPRPARRP
                     ARRDDDWALRDAELQPLRDATMRW"
     gene            complement(1242..1976)
                     /locus_tag="VHZ56_09340"
     CDS             complement(1242..1976)
                     /locus_tag="VHZ56_09340"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX4298214.1"
                     /translation="MHQHFDDEHHRQHAWRKFEAMGRRGWFGGPGRGWGGPGGPGDPR
                     QGGGFGGDWGDNLRIGRMLASGDLRLVALYFIEQQPRHGYDLIKAIEDKTGGLYVPSP
                     GVIYPALTFLEEASYVTSVAEANKRLYTITDEGRTYLNDNRAAVESTLAHLGRIGEQF
                     AKVRERWEETRRDFDQQPRPDRDMDDVAPEVNAARRELKDAIRDAARRRDPESQRRLA
                     DILRRAADEIRRGPQPGPDANADIDI"
     gene            complement(2125..>2404)
                     /locus_tag="VHZ56_09345"
     CDS             complement(2125..>2404)
                     /locus_tag="VHZ56_09345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018268756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX4298215.1"
                     /translation="STVLHWAAGAGGKGALLTGDSIMVVPDTRWVSFMYSFPNLVPLN
                     ARGVEAIVRAVKPYAFDRIYAGWWDRVLDHDAKAAVQRSAERYIAAIR"
BASE COUNT          358 a          761 c          891 g          394 t
ORIGIN      
        1 tcggcggcgg tgacgccggt ggtcgactgc acgccgcgat tggcgaggag cgagatggcg
       61 cgcgcgcaag aatgcggatc ggggaacggg atcagtccgg tcagcttgaa cgggtgctcg
      121 gggatggtgc gataggtcac ctccgagacg aagccgaggg tgccctcgga accgacgatc
      181 agatgcgcga ggatgtcgat ggggtcgtcg aaatcgacca gcgcattgat cgagtagccg
      241 acggtgttct tgatgcggta tttgtggcgg atgagcgcga ccagcccggc gtcggccatg
      301 acctcgtgat gcagccgatg gaggccctcg agcagcgcgg cgtggctggc gcggaaggcg
      361 gcgacggagg caggatcgcc ggagtcgagc accgttccat cgagcagcag caggcgcagc
      421 cggtcgagcg tgtgataggt gttgtaggcg acgccgcagc acatgcccga cgaattgttg
      481 ttgacgacac cgccgatctt gcaggtggcc tggctggccg gatcggggcc gagcttgcgg
      541 ttgaacggtt tcagcgcccg gttggcctgg gcgacgatga tcgccgggcc gagcacgatg
      601 cgctcgccgc cgtcgagcac ctgcatcttc ctgaagccgt cgccgagcac ggcgagcacg
      661 ccgtcggaat tggactggcc ggacagcgag gtgccggcgg cgcgaaacgt cagcggcagg
      721 ctttcggccc gcgccgcggc gatgacggcg cgcacctcgt cctcggaatt gacgatgacc
      781 acgatggcgg gcaccagccg gtactggctg gcgtcgccgg cataggcgta ggtcatcagc
      841 ggatcggtca tgatccggcc gggcaggatg gcggtggtgg cgcgcaggcg cgcggcgacg
      901 cgcccggccg cccggccctt gtcggcgatg ggcgccatct ggttcacgcc acggtcctct
      961 gcatggcgcg caatttagtc cgatttgccg caaagcggga gggggcgaat ggccgccggc
     1021 ggcgtcacca gcgcatggtg gcgtcgcgca gcggctgcag ttcggcatcg cgcagcgccc
     1081 agtcgtcgtc gcggcgggcg ggccggcgcg ccggtcttgg cggcgtggtc gccgcgggat
     1141 cgggaatagt cgcctccgcc gggcgattgc cggcggagga ggggtcggga cgcgcggaag
     1201 cgtccggtcc gatgtcggcg tgccaccaca tcggggacgc ctcagatgtc gatgtcggca
     1261 ttggcgtcgg gtccgggctg cggaccgcgg cggatctcgt cggcggcgcg ccgcaggatg
     1321 tcggcgagac gccgctggct ttcgggatcg cggcggcggg cggcgtcgcg gatggcatcc
     1381 ttgagctcgc ggcgggcggc gttcacttcg ggggcgacgt cgtccatgtc gcggtcgggc
     1441 cgcggctgct ggtcgaaatc gcggcgcgtc tcttcccagc gctcgcggac cttggcgaac
     1501 tgctcgccga tccgacccag gtgcgccagc gtcgattcca ccgcggcgcg attgtcgttg
     1561 aggtaggtgc ggccctcgtc ggtgatggtg tagagccgct tgttggcctc ggcgacggag
     1621 gtgacgtagc tggcttcctc gaggaaggtg agggcggggt agatcacgcc cgggctcggc
     1681 acgtagaggc cgccggtctt gtcctcgatg gccttgatca ggtcgtagcc gtggcgcggc
     1741 tgctgctcga tgaagtagag cgcaacgagc cggaggtcgc cggaagccag catgcggccg
     1801 atccgcaggt tgtcccccca gtcgccgcca aagccgccgc cttggcgcgg gtcgcccggg
     1861 ccaccgggtc caccccagcc gcgtcccggc ccgccaaacc agccgcgccg gcccatcgcc
     1921 tcgaatttgc gccaggcatg ctggcggtga tgttcgtcgt cgaaatgttg atgcatgatg
     1981 tcgtctccga tatatcttac gatagtcgtg agatagatcg gcagcggctg acggtcaaga
     2041 taggtcgtaa gatatatctt agtcgcgact tctctcaagc agcgtccatc attccctcca
     2101 tgtcggtcag tcggccgccc ccgcctacct gatagccgcg atatatcgct cggcgctccg
     2161 ctgcaccgcc gccttggcat cgtggtcgag cacgcggtcc caccagccgg cataaatccg
     2221 gtcgaacgca tagggcttta ccgcccgcac gatcgcctcc accccacggg cattgagggg
     2281 gaccaggttg gggaacgagt acatgaagct cacccagcgc gtgtcgggca ccaccatgat
     2341 cgagtcgccg gtgagcagcg cgcccttgcc gccggccccc gccgcccagt gcagcacggt
     2401 cgag
//
LOCUS       DATAZA010000369         3899 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2597198, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000369 DATAZA010000000
VERSION     DATAZA010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3899
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2597198"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(12..923)
                     /gene="cysD"
                     /locus_tag="VHZ56_09350"
     CDS             complement(12..923)
                     /gene="cysD"
                     /locus_tag="VHZ56_09350"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA];
                     GO_process: GO:0019419 - sulfate reduction [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HEX4298216.1"
                     /translation="MTEPASLSHLRALEAEAIEIFREVAASFERPVMMYSIGKDSSVL
                     LHVARKAFYPSRIPFPLLHIDTTWKFREMIAFRDRMAREHGFELIVHTNQEGVRNNIN
                     PFDQGSARYTDIMKTQALRQALTAGGYDAAIGGARRDEEKSRAKERIFSHRNAQHAWD
                     PKNQRPELWRVFNTRLAPGESMRVFPLSNWTELDIWTYIYSEKIEIVPLYFARKRPVV
                     ERSGTLIMIDDDRFRFEPGEKPHDEMVRFRTLGCYPLSGGVRSTAADLPSIIMEMQAS
                     RTSEREGRLIDSDQIGSMEKKKQEGYF"
     gene            1113..2162
                     /locus_tag="VHZ56_09355"
     CDS             1113..2162
                     /locus_tag="VHZ56_09355"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEX4298217.1"
                     /translation="MENHRDVLSAIGNTPLIRLNRVSDATGCDIWGKAEFLNPGQSVK
                     DRAALFIVRDAVERGQLRPGGTIVEGTAGNTGIGLALVADAMGFRTVILIPETQSQEK
                     KDALRLLGAELIEVPAKPYKHPNNYIKLSGRLAQKLDAELPNGAVWANQFDNTANRRA
                     HLEGTGPEIWEQTGGRIDGFICAVGSGGTLGGVSMALKARNTDIQIGIADPEGAALYN
                     YYAHGELKSAGNSITEGIGQGRITANLDGVEVDRAYQIPDSEALPYVFDLLEHEGLCL
                     GGSSGINVAGAVRLARDLGPGKTIVTVLCDYGNRYQSKLFNPAFLKSKGLPVPHWLEQ
                     PASLDWRAVVEPEPS"
     gene            2167..3615
                     /gene="cls"
                     /locus_tag="VHZ56_09360"
     CDS             2167..3615
                     /gene="cls"
                     /locus_tag="VHZ56_09360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019965209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008808 - cardiolipin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0032049 - cardiolipin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HEX4298218.1"
                     /translation="MLAFENWLADLVPQQGVIHWIFFANYLLALGFAISEIFRSRTSQ
                     GSIAWIITLLVLPFPTTLIYAVFGLKAFDDYAAVQTHSGRALRKVRAARTKILDQPAT
                     AEFPVLANVSQLPFLAGNDTELLIDGEATFGSILDGISAATQVLLIQFYIIHDDQLGR
                     DFADRLIERAKAGVRIYLLYDDVGSFGLPRAYKQRLAAAGISIHGFNHRHRFLRILGP
                     TRIQYRNHRKIVIADGREAWIGGLNVGDEYMGRSKVFGHWRDTHVRFKGPAVLAATLS
                     FQEDWQWATGEELTDLPATIEVAGDQSMLIMPTGPADELESCAIAFDDVIGQSQKRLW
                     IVSPYFVPDLSMETALFAARMRGVDVRILIPQKPDHRIVWLASIAYANRMAHHGIDMY
                     RYPTGFLHQKVILVDDKIAGVGTVNFDNRSFRINFEITMWFTGDRMIRDVERMLKKDF
                     DDANRIDRVVPGSQGLVMRFLTQAARLLSPIL"
     gene            3622..>3899
                     /locus_tag="VHZ56_09365"
     CDS             3622..>3899
                     /locus_tag="VHZ56_09365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019170425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase-related protein"
                     /protein_id="HEX4298219.1"
                     /translation="MTDFVFRTDSYLRTLDATIAEITPEGGIGLDRTIFYATSGGQPN
                     DTGRLIAGERIVPIVNVVHPEGDKTRIIHLPAAGTPALRPGESVKLEL"
BASE COUNT          669 a         1443 c         1129 g          658 t
ORIGIN      
        1 cgatgcgttc atcagaaata cccctcctgc ttcttcttct ccatcgagcc gatctggtcc
       61 gaatcgatca gtcggccctc gcgctcggag gtccgcgagg cctgcatctc catgatgatc
      121 gacggcaggt cggcggccgt cgagcgcacc ccgccgctca gcggatagca gccgagcgtg
      181 cgaaaccgca ccatctcgtc atgcggtttt tcgcccggct cgaagcggaa ccggtcgtcg
      241 tcgatcatga tcagcgtgcc cgagcgctcc accaccggcc gcttcctcgc gaaatacagc
      301 ggcacgatct cgatcttttc cgaatagatg taggtccaga tgtcgagctc ggtccagttg
      361 ctcagcggga acacgcgcat gctctcgccc ggcgccagcc gcgtgttgaa cacccgccac
      421 agctccggcc gctggttctt ggggtcccac gcatgctgcg cattgcggtg cgagaagatc
      481 cgctccttgg cccgcgactt ctcctcgtcg cgccgcgccc cgccgatcgc cgcatcgtag
      541 ccgccggcgg tcagcgcctg ccgcagcgcc tgcgtcttca tgatgtcggt gtagcgcgcc
      601 gagccctggt cgaacgggtt gatgttgttg cgcacccctt cctggttggt gtgcacgatc
      661 agctcgaagc cgtgttcgcg cgccatccgg tcgcggaagg cgatcatctc gcgaaatttc
      721 cacgtcgtgt cgatgtggag cagcgggaac gggatacggc tgggatagaa cgccttgcgc
      781 gccacgtgca gcagcaccga cgagtccttg ccgatcgagt acatcatcac cggccgctcg
      841 aagctcgccg ccacctcgcg gaagatctcg atcgcctcgg cttcgagtgc cctgagatgg
      901 ctgaggcttg caggttcggt catgcagcgg ggtgtcccgg gaatggaatt gcgcgggaaa
      961 tacgctttcc cccggcccgg ggcaagcaac ggacaggcgt cgattggcgc cccgctagcc
     1021 gcgctttcca atccccgggg cgagacggaa atcccttacc gtttcgggca ttgccgcttg
     1081 tcccccatgc tggcgctttc tagaaccgga gcatggaaaa tcatcgcgac gtcctctccg
     1141 ccatcggcaa cacccccctc atccggctca atcgcgtctc cgacgccacc ggctgcgaca
     1201 tctggggcaa ggcggaattc ctcaatcccg gccagtcggt aaaggaccgc gccgcgctgt
     1261 tcatcgtccg cgatgccgtg gaaaggggcc agctccggcc cggcggcacc atcgtcgagg
     1321 gcaccgccgg caacaccggc atcggcctcg cgctcgttgc cgacgccatg ggcttccgca
     1381 ccgtcattct gatccccgag acgcagagcc aggaaaagaa agatgccctc aggctgctcg
     1441 gcgccgagct gattgaggtc cccgccaagc cctacaagca ccccaacaac tacatcaagc
     1501 tcagcggccg gctggcgcag aagctcgatg ccgagctgcc gaacggcgcc gtctgggcca
     1561 accagttcga caacaccgcc aaccgccgcg cccatctcga aggcaccggc cccgaaatct
     1621 gggagcagac cggcggccgg atcgacggct tcatctgcgc cgtcggttcg ggcggcacgc
     1681 tcggcggcgt ctccatggcg ctcaaggccc ggaacacgga catccagatc ggcatcgccg
     1741 atcccgaggg cgccgcgctc tacaactact atgcccatgg cgagctcaaa tccgccggca
     1801 actcgatcac cgagggcatc ggccagggcc gcatcaccgc caatctcgac ggcgtcgagg
     1861 tcgaccgcgc ctaccagatt cccgacagcg aggccctgcc ctacgtcttc gacctgctcg
     1921 agcacgaggg gctctgcctc ggcggctcgt ccggtatcaa cgtcgccggc gccgttcgcc
     1981 tcgcccgcga cctgggcccg ggcaagacca tcgtcaccgt gctctgcgac tacggcaacc
     2041 gctaccagag caagctgttc aacccggcct tcctcaaatc caagggactg ccggttccgc
     2101 attggctgga gcagccggct tcgctagatt ggcgcgccgt cgtcgaaccc gaacccagct
     2161 gaccctatgc tcgccttcga gaactggctc gccgacctgg ttccgcagca gggcgtcatc
     2221 cactggatct ttttcgccaa ctacctgctg gcgctcggct ttgccatcag cgagatcttt
     2281 cgctcgcgca cctcgcaggg ctcgatcgcc tggatcatta ccctgctggt cctgccgttt
     2341 ccgacgacgc tgatctacgc cgtcttcggg ctcaaggcct tcgacgacta cgccgccgtg
     2401 cagacccatt ccggccgcgc cctgcgcaag gtgcgcgctg cccgcaccaa aatcctcgac
     2461 cagcccgcga ccgcggagtt tccggtcctc gccaatgttt cgcagctgcc gttcctcgcc
     2521 ggcaacgaca ccgagctgct gatcgacggc gaagccacct tcggctcgat cctcgatggc
     2581 atcagcgccg ccacgcaggt gctgctcatc cagttctaca tcatccacga cgaccagctc
     2641 ggccgcgact tcgccgaccg cctgatcgag cgcgccaaag ccggcgtgcg catctacctg
     2701 ctctatgacg acgtcggcag cttcggcctg ccgcgcgcct acaagcagcg gctcgccgcc
     2761 gccggcatca gcatccacgg cttcaaccat cgccaccgct tcctgcgcat cctcggcccg
     2821 acgcgcatcc agtaccgcaa ccaccgcaag atcgtcatcg ccgatggccg cgaggcgtgg
     2881 atcggcggcc tcaatgtcgg cgacgagtac atgggccgct cgaaagtctt cggccactgg
     2941 cgcgacaccc acgtccgctt caagggcccg gccgtgctgg cggcgaccct cagcttccag
     3001 gaagactggc aatgggccac cggcgaggaa ctgaccgacc tgccggccac catcgaagtc
     3061 gccggcgacc agtcgatgct gatcatgccc accggccccg ccgacgagct cgagagctgc
     3121 gccatcgcct tcgacgacgt catcggccag agccagaagc ggctgtggat cgtcagcccg
     3181 tatttcgtcc ccgacctgtc gatggaaacc gcgctgttcg ccgcccgcat gcgcggcgtc
     3241 gacgtccgca tcctcatccc gcagaagccc gaccaccgca tcgtctggct ggccagcatc
     3301 gcctacgcca accgcatggc gcaccacggc atcgacatgt accgctaccc caccggcttc
     3361 ctgcaccaga aagtcattct ggtcgacgac aagatcgccg gcgtcggcac ggtcaatttc
     3421 gacaaccgtt cgttccgcat caatttcgag atcaccatgt ggttcaccgg cgacaggatg
     3481 atccgcgacg tcgagcgcat gctgaagaaa gacttcgacg acgccaaccg gatcgaccgc
     3541 gtcgttccgg gctcgcaggg cctggtgatg cgcttcctga cccaggccgc ccgcctgctg
     3601 tcacccatcc tctaggacgc catgaccgat ttcgtcttcc gcaccgacag ctacctcagg
     3661 acgctcgacg cgacgatcgc tgagatcacc cccgagggcg gcatcgggct cgaccgcacg
     3721 atcttctacg cgacctccgg tggccagccc aacgacaccg gccggctgat tgccggcgag
     3781 cggatcgtcc cgatcgtcaa tgtcgtccac cccgagggcg acaagacccg catcatccac
     3841 ctgccggccg cgggcacccc ggcgctgcgc cccggcgagt ccgtgaagct cgagctcga
//
LOCUS       DATAZA010000370         2001 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3179323, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000370 DATAZA010000000
VERSION     DATAZA010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2001
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3179323"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /locus_tag="VHZ56_09370"
     CDS             <1..426
                     /locus_tag="VHZ56_09370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyalkane--coenzyme M transferase"
                     /protein_id="HEX4298220.1"
                     /translation="LRMHMCWGNYPGPHHCDVPLIDVIDIMWKAKPHAYLIEAANPRH
                     AHEWEVFETVKLPEGKVLVPGVIECQSNYIEHPEVVAQRIGRYANLCGRENVVAGVDC
                     GFSIHVGMGGVDPDVTYAKLAAMAEGARIASKKYWPKAA"
     gene            462..1445
                     /locus_tag="VHZ56_09375"
     CDS             462..1445
                     /locus_tag="VHZ56_09375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HEX4298221.1"
                     /translation="MREEHKIVTGIHHITSCVGGAQVDIDFMTQVIGQRLIKQTVLFD
                     GTAPIYHLYYANKNAEIGTVMTTFPYRQAGIKGRRGSGQIAATTYSVAENSLDFWIGH
                     LNKHKVKHSGLQKRFGQNVISFPDPAGNVYELVGDDRDKRSGWVTDEISEANSVKGFN
                     YVVMSVRDVEGQHAYFTDGLGFTKSGEEGAFHRYDIQDGGPCKTVVLRHDPNTPQGSW
                     TFGEGTVHHIAFQVANDDVQMQLKLYLEGLGYTDASEIKDRNYFHSVYIRSPGGILTE
                     LATTNIGFATDEPLDKLGQSIQLPPWFEPRRAEIIAPLEKITVPASNRPRG"
     gene            1459..>2001
                     /locus_tag="VHZ56_09380"
     CDS             1459..>2001
                     /locus_tag="VHZ56_09380"
                     /inference="COORDINATES: protein motif:HMM:NF014305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298222.1"
                     /translation="MHENPVVEYRTGSLPKLTVVLVHGRTLTPAYMQALAERLALPDV
                     RYVFPVADGNTWFPKPFTAPLAENEPALSAALAHYESVVAGLLAAGTALDRMVVGGFS
                     QGASLTSEFLHRYPRRYAGALLWTGGLVGPDETEWAVRRSLSGMHACVTTSEVDPFVP
                     PHRARRTVDWLLASGAIVTAR"
BASE COUNT          371 a          658 c          647 g          325 t
ORIGIN      
        1 ctgcggatgc acatgtgctg gggcaattat cccggcccgc accattgcga cgtaccgctg
       61 atcgacgtca tcgacatcat gtggaaggcc aagccgcacg cctacctcat cgaggcggcc
      121 aatccccgcc acgcgcatga gtgggaagtg ttcgagacgg tcaagctgcc cgagggcaag
      181 gtgctggtgc cgggcgtcat cgagtgccag tcgaactaca tcgagcaccc cgaggtggtg
      241 gcgcagcgga tcggccgcta cgccaacctg tgcggccgtg aaaacgtcgt cgccggcgtc
      301 gattgtggct tttcgatcca tgtcggcatg ggcggcgtcg atcccgacgt gacctatgcc
      361 aagctcgcgg cgatggcaga gggcgcccgc atcgcgtcga agaaatactg gccaaaggcg
      421 gcctgatcgg ccgcggcaaa ccactcgcgg aggagagcat catgcgcgaa gaacacaaga
      481 tcgtcaccgg catccatcac atcacctcat gcgtcggcgg tgcccaggtg gacatcgact
      541 tcatgacgca ggtgatcggc cagcggctga tcaagcagac cgtgctgttc gacgggacgg
      601 cgccgatcta ccacctctac tacgccaaca agaacgccga gatcggcacc gtgatgacca
      661 cgttcccgta ccggcaggca gggatcaaag gccgccgcgg atcgggccag atcgcggcga
      721 cgacctactc ggtggcggag aactcgctcg atttctggat cggccatctc aacaagcaca
      781 aggtgaagca ctccggcctc cagaagcgct tcggccagaa cgtcatcagc ttcccggacc
      841 cggcgggcaa tgtctatgag ctggttggcg acgaccgcga caagcgctcg ggctgggtca
      901 ccgacgaaat ctccgaggcc aactcggtca agggcttcaa ctacgtcgtg atgtcggttc
      961 gcgacgtgga aggccagcat gcctatttca ccgacggcct cggcttcacg aagtccgggg
     1021 aagagggcgc cttccatcgc tatgacatcc aggacggcgg gccgtgcaag accgtcgtgc
     1081 tgcggcacga cccgaacacg ccgcagggca gctggacgtt cggcgagggc accgtccacc
     1141 acatcgcgtt ccaggtggca aacgacgacg tgcagatgca gctgaagctc tatctcgagg
     1201 gcctgggcta taccgacgcc tccgagatca aggatcgcaa ctatttccac tcggtctata
     1261 tccgctcgcc gggcggcatc ctgaccgagc tggccacaac caatatcggc tttgcgacgg
     1321 acgagccgct ggacaagctc ggccagtcga tccagctgcc gccgtggttc gaaccgcgcc
     1381 gcgccgagat catcgcgccg ctcgaaaaga tcaccgttcc agcgtcgaac cgaccgaggg
     1441 gctaggggct cagggtcgat gcacgagaat ccggtcgtcg agtaccggac cggaagcctg
     1501 ccgaaactga ccgtggtcct ggtgcacggc cggaccttga cgccagccta catgcaggcg
     1561 ctggccgagc gcctggcatt gcccgatgtc cgctacgtgt ttcctgtggc ggacggcaat
     1621 acctggttcc cgaagccgtt tacggcgccc ctagccgaga acgaaccggc gctctcggca
     1681 gccctggcgc actacgaaag tgtcgtcgcc gggctcctcg cggcgggcac cgccctcgac
     1741 cgcatggtgg ttggcggctt ctcgcagggc gcatcgttga ccagcgagtt cctccatcgc
     1801 tatccgcggc ggtatgccgg ggcgcttttg tggaccggcg gtctcgtggg cccggacgag
     1861 acggagtggg ctgtgcggcg gtcgctgtcc ggcatgcacg cttgcgtcac caccagcgag
     1921 gtcgatccgt tcgtgccgcc gcaccgcgcg cggcggaccg tcgactggct gctggccagc
     1981 ggcgcgatcg tcacggcccg g
//
LOCUS       DATAZA010000371         5638 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_857108, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000371 DATAZA010000000
VERSION     DATAZA010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5638
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_857108"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..372
                     /locus_tag="VHZ56_09385"
     CDS             <1..372
                     /locus_tag="VHZ56_09385"
                     /inference="COORDINATES: protein motif:HMM:NF018604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1275 family protein"
                     /protein_id="HEX4298223.1"
                     /translation="IMAASVALTLALSFAGYPVALAMLPLACAAGAQNAVLAPVGAAR
                     LGVTYVTGTLFAAGQDLARATIGAAPPWRWLQHLLVWASLSLGALLGGLAYTAWHVPA
                     LLVPAVVYLLALLDSLFAGRE"
     gene            complement(424..2790)
                     /gene="clpA"
                     /locus_tag="VHZ56_09390"
     CDS             complement(424..2790)
                     /gene="clpA"
                     /locus_tag="VHZ56_09390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010909564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0043335 - protein unfolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HEX4298224.1"
                     /translation="MPSFSRGLEKALHQAMNLARERAHEFATLEHLLLALTDDRDTIA
                     VLTGCDVDIEALKGDLEDFINEELDSLVVPNGQDARPTAAFQRVIQRAVIHVQSSGKE
                     EVTGANVLVAIFAERESHAAYFLEQQDMSRLDAVNFISHGITKSGPNEQRTVRGAEDG
                     PGNNGHAEEGSQRASGNNQSSALADFCVDLNAKAKAGKIDPLIGRDPELRRTIQVLCR
                     RSKNNPIYVGDAGVGKTAIAEGLARKIVEGTVPEVLKGATIYALDMGSLLAGTRYRGD
                     FEERLKAVMKELEKHPDAILFIDEIHTVIGAGATSGGALDASNLLKPALASGNMRCIG
                     STTYKEYRQFFEKDRALVRRFQKIDVAEPTIPDAIEIVKGLRPYFEDFHKLKYTDDAL
                     TAAVELSARYINDRKLPDKAIDVIDETGASQMLLLPEERKTLIDVPEIEATVATMARI
                     PPKSVSKSDTEMLQSLEVDLKRVVFGQDLAIHALSSAIKLARAGLREPEKPIGSYLFT
                     GPTGVGKTEVAKQLADTLGVELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDG
                     VDQHPHCVVLLDEIEKAHPDLFNILLQVMDHGKLTDHNGKSVDFRNVILIMTSNVGAM
                     ELSKSPIGFGRKREAGDDEEAINRMFTPEFRNRLDAIISFAPLPPAVVRQVVEKFVLQ
                     LEGQLAERGVTISLTPEAAEWLASRGYDERMGARPLGRVIQEHVKKPLADQVLFGELV
                     NGGTVTVAVVGIGPDAKLELIASPPRPARPKAIPAPKAVRKPKAEEKS"
     gene            complement(2800..3213)
                     /gene="clpS"
                     /locus_tag="VHZ56_09395"
     CDS             complement(2800..3213)
                     /gene="clpS"
                     /locus_tag="VHZ56_09395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003611485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HEX4298225.1"
                     /translation="MLRRFDRSMPTSDLTTLAAGGPGQPLRAAKENRGGEGGSKSDTG
                     TITRTKPKTQRPNLYRVLLLNDDYTPMEFVVLVLQDVFNKTREDAMRIMLHVHNKGVG
                     ECGVFPYEVAETKVTRVMDTARKNQHPLQCVMEKQ"
     gene            3544..5109
                     /locus_tag="VHZ56_09400"
     CDS             3544..5109
                     /locus_tag="VHZ56_09400"
                     /inference="COORDINATES: protein motif:HMM:NF012970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEX4298226.1"
                     /translation="MLLPATEAMASASRSFAGIVVDAKSGKILYQNNPDAYRFPASVS
                     KVMTLYILFQELSVGHIKLTDMMPVSRWAASAEPTKLGLKPGASISVDNAIRAICTLS
                     ANDMARVVAEYIGGSESNFAKRMTATAHALGMSHTTYVNASGLPDSRQITTVRDQSIL
                     GIAIFEHFPKYYAYFQTRSFAYGRRVYGNHNNLLGVDGIDGIKTGYTGAAGYNLLTAA
                     RVNDRHIVVVGFGFPTAGSRDAKVRSLVDTYLPQARTGDYLQTAMIPLPGRRGSPLPS
                     DTVQLASADPVVPMPAPAFRGADPDEAPADPQMGIGDTDTVDANVTVASITAPQPLMR
                     PVDLGMPPAIDAVNAAAGTPKTQGATDTVVGAFTDAYQLGAPPAPLGQTRPSAPLIPP
                     VGVGDSGQPVDLMTSGSVGNDATAAASPADVTQVAEAETPSQPMPASLPTGWIVQIGA
                     APTETGAHGLIGDATDKVDGLGKFNGFIQRFEKDGQTYFRARFGGFSGQDAANDMCKQ
                     IKQAKLSCLAMQS"
     gene            5168..5437
                     /locus_tag="VHZ56_09405"
     CDS             5168..5437
                     /locus_tag="VHZ56_09405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298227.1"
                     /translation="MSDTSSLTELARFIGQSGLAGGAAERRAVNDLDGRLKRAPAARP
                     RVSDLLSVVLTLSARTRRVVMPRVEIDLDVFAPGGQRAVRILLPE"
     gene            complement(5447..>5638)
                     /locus_tag="VHZ56_09410"
     CDS             complement(5447..>5638)
                     /locus_tag="VHZ56_09410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEX4298228.1"
                     /translation="MATVSIGIAASLQPIAADVLLAAADAAVYEAKSRGRNRLVVAEP
                     AALRRSPGQQAMPAARLSA"
BASE COUNT          854 a         1890 c         1907 g          987 t
ORIGIN      
        1 atcatggcgg cgagcgtcgc gctcaccctg gccctgtcgt tcgccggata tcccgtggca
       61 ctggccatgc tgccgctcgc ctgcgccgcg ggggcgcaga acgccgtgct ggcgccggtg
      121 ggcgccgcgc gcctcggggt cacctacgtc accggtacgc tgttcgccgc cgggcaggac
      181 ctcgcccgcg ccacgatcgg cgccgcgccg ccctggcggt ggctgcagca cctgctggtg
      241 tgggcttcgc tcagcctcgg cgcgctgctg ggagggctcg cctacaccgc gtggcatgtt
      301 ccggcgctgc ttgttccggc ggtggtctac ctgctggcgc tgctggactc gctgttcgcc
      361 gggcgggaat agcaaaggcc gggatcgctc ccggccttga tcgttttcgg cccgctcagg
      421 ccgtcagctc ttttcctcgg ccttgggctt cctgaccgct ttcggcgccg ggatggcctt
      481 gggccgcgcc gggcgcggcg gggacgcgat gagctccagc ttggcgtccg gaccgatacc
      541 caccaccgcg acggtcacgg tgccgccatt caccagttcg ccgaacagca cctggtcggc
      601 cagcggcttc ttgacgtgct cctggatcac ccggccgagc ggccgcgcgc ccatgcgctc
      661 gtcgtagccg cggctggcga gccattcggc cgcttccggg gtgagactga tcgtgacgcc
      721 gcgctcggcc agctggcctt cgagctgcag cacgaacttc tcgacgacct gccggaccac
      781 ggccggcggc agcggcgcga acgagatgat ggcatcgagg cggttgcgga actccggcgt
      841 gaacatccgg ttgatcgctt cctcgtcgtc gcccgcctcg cgcttgcggc cgaagccgat
      901 cggcgatttc gacagctcca tggcgccgac gttcgacgtc atgatcagga tgacgttgcg
      961 gaaatccacc gacttgccgt tgtggtcggt gagcttgccg tggtccatca cctgcagcag
     1021 gatgttgaac aggtcggggt gggccttctc gatctcgtcg agcagcacga cgcagtgcgg
     1081 atgctggtcg acgccatcgg tcaacaggcc gccctggtcg aagccgacat agcccggagg
     1141 ggcgccgatc agccggctga cggtgtgacg ctccatgtat tccgacatgt cgaagcgcag
     1201 cagctcgacg ccgagggtat cggccagctg cttggcgact tcggtcttgc cgacgccggt
     1261 cgggccggtg aacaggtagg agccgatcgg cttttccggt tcccgcaggc cggcgcgcgc
     1321 cagcttgatc gccgaggaca gcgcgtggat cgcgaggtcc tggccgaaca ccacgcgctt
     1381 gaggtcgacc tcgaggctct gcagcatctc ggtgtcggac ttgctcaccg atttgggcgg
     1441 aatgcgcgcc atcgtggcga cggtcgcctc gatctcgggc acgtcgatga gggtcttgcg
     1501 ctcctcgggc agcagcagca tctggctggc gccggtctcg tcgatcacgt cgatcgcctt
     1561 gtccgggagc ttgcggtcgt tgatgtagcg ggcgctgagc tcgacggcgg cggtcagcgc
     1621 gtcgtcggtg tatttgagct tgtggaagtc ctcgaagtac ggacgcaggc ccttcacgat
     1681 ctcgatggcg tccgggatcg tcggctcagc cacgtcgatc ttctggaagc gacgaacgag
     1741 cgcgcgatcc ttctcgaaga actgccggta ttccttgtag gtggtcgagc cgatgcaccg
     1801 catgttgccg gacgcgagcg ccggcttcag caggttggac gcatcgagcg ccccgccgga
     1861 cgtggcgccg gcgccgatca ccgtgtggat ctcgtcgatg aacaggatgg cgtcgggatg
     1921 cttctcgagt tccttcatca cggccttgag ccgctcctcg aaatcgccgc ggtagcgggt
     1981 gccggccagc agcgagccca tgtcgagggc atagatggtg gcgcccttca gcacttcggg
     2041 cacggtgccc tcgacgatct tgcgagcgag gccctcggcg atggcggtct tgccgacgcc
     2101 ggcgtcgccc acgtagatcg ggttgttctt cgagcggcgg cacagaacct ggatggtgcg
     2161 gcgcagctcg ggatcgcggc cgatcagcgg gtcgatcttg ccggccttgg ccttggcgtt
     2221 gaggtcgacg cagaaatcgg caagcgccga gctctggttg ttgccgctgg cccgctggct
     2281 tccctcctcg gcatggccgt tgttgccggg tccgtcctcg gcgccgcgca cggtgcgctg
     2341 ctcgttgggg cccgacttgg tgatgccgtg gctgatgaaa ttgaccgcat cgagccggct
     2401 catgtcctgc tgctcgagga aataggcggc gtggctctcg cgctcggcga agatggcgac
     2461 cagcacgttg gcgccggtga cctcttcctt gcccgatgac tggacgtgga tgacggcgcg
     2521 ctggatcacc cgctggaacg cggccgtggg ccgggcatcc tggccgttcg gcaccaccag
     2581 gctgtccagc tcctcattga tgaagtcctc gaggtcgccc ttcagcgcct cgatgtcgac
     2641 gtcgcagccg gtcagcaccg cgatggtgtc gcggtcgtcg gtcagggcca gcagcaggtg
     2701 ctcgagcgtc gcaaattcat gggcacgctc gcgggcgagg ttcatcgcct gatgcagggc
     2761 cttttccagt ccgcgggaga aagaaggcat atgatgttcc tactgttttt ccatcacgca
     2821 ttgcagcggg tgctggttct tgcgtgccgt gtccataacg cgcgtgacct tggtttcggc
     2881 cacctcgtat ggaaagacgc cgcactcccc gacgcccttg ttgtggacgt gcagcatgat
     2941 gcgcatggcg tcttcgcggg tcttgttgaa gacgtcctgc aggacgagga cgacgaactc
     3001 catgggcgtg tagtcgtcgt tgagaagcag aacccggtaa agattgggac gctgcgtctt
     3061 cggcttcgtc cgggtgatcg tgccggtgtc ggatttcgag ccgccctcgc cgccccggtt
     3121 ctcctttgcc gcccgaagcg gctgaccggg accgcccgcg gccagggtcg tgagatcaga
     3181 tgtcggcatg gaacgatcga aacgacgcag catggtgaag ccattatgta ggcaaaacgc
     3241 gcccactgtt aaggggaacc tttcctcccc atccgggcag gccgaaacac cccgctggcc
     3301 cggcgcgagc ggtcgatgca aatcccgcgg cattttactg aatggtaaga gcgcgcccct
     3361 attctgccgc aagtgaaggc gatggcgcgg gcttggggga agccgcgtca gaccctttga
     3421 cgagtcgcca gggagggcca gaaggccccg ttgtttggag taccggggtt ggcttcccaa
     3481 agggtcttga attcgcgccg catcctctgg cgcatcgcag cagctgttct tgtcgtactt
     3541 tcgatgctcc tgcccgccac cgaggcgatg gcgagcgcgt cgcgttcgtt cgccggcatc
     3601 gtcgtcgatg ccaagtccgg caagattctc taccagaaca accccgacgc ctatcgcttc
     3661 ccggcctcgg tctcgaaggt gatgacgctc tacatcctgt tccaggagtt gagcgtgggc
     3721 catatcaagc tcaccgacat gatgccggta tcgcgctggg ccgcctccgc cgagccgacc
     3781 aagctcggcc tcaagccggg cgccagcatc agcgtcgaca acgccatccg cgccatctgc
     3841 acgctttcgg ccaacgacat ggcccgggtg gtcgccgagt acatcggggg cagcgagtcc
     3901 aatttcgcca agcgcatgac ggcgaccgcg cacgcgctgg gaatgagcca cacaacctat
     3961 gtcaacgctt cggggctgcc cgacagccgg cagatcacga cggtgcgcga ccagtcgatc
     4021 ctcggcatcg cgatcttcga gcatttcccg aaatactacg cctatttcca gacgcgcagc
     4081 ttcgcctatg gccgccgcgt ctacggcaat cataacaacc tgctgggcgt cgacggcatc
     4141 gacggcatca agaccggcta caccggcgcc gcgggctaca acctgctcac ggcggcgcgg
     4201 gtcaatgacc gccacatcgt ggtggtcggc ttcggcttcc cgacggccgg ctcgcgcgac
     4261 gccaaggtgc gcagcctcgt cgacacctac ctgccgcagg cccgcacggg ggactacctg
     4321 cagaccgcga tgatcccgct tcccgggcgc aggggctcgc cgctgccgag cgacaccgtg
     4381 caactcgcga gcgccgatcc ggtggtgccg atgccggcgc cggccttccg cggcgccgat
     4441 cccgacgagg cccccgccga cccgcagatg ggcatcggcg acaccgatac ggtcgacgcc
     4501 aacgtcaccg tcgccagcat cacggcgccg cagccgctga tgcggccggt ggacctcggc
     4561 atgccgccgg cgatcgacgc cgtcaacgcc gccgcgggga cgccgaagac gcaaggcgcc
     4621 accgataccg tcgtcggcgc cttcaccgat gcctaccagc tgggcgcacc gccggccccg
     4681 ctgggccaga cccggccgtc ggcgccgctc attccaccgg tgggcgtcgg cgattccggc
     4741 cagccggtcg acctcatgac gtcgggcagc gtcggcaacg atgcgaccgc ggcggcgagc
     4801 ccggctgacg tgacgcaggt cgccgaagcc gagaccccga gccagccgat gccggcctcg
     4861 ctgccgaccg gctggatcgt ccagatcggc gccgcgccga ccgagaccgg agcgcatggc
     4921 ctcatcggcg acgccacgga caaggtcgac gggctcggca agttcaacgg cttcatccag
     4981 cgcttcgaga aggatggcca gacctatttc cgcgcccgct tcggaggctt ctccggccag
     5041 gacgcggcca acgacatgtg caagcagatc aagcaagcaa agctgagctg cctcgcgatg
     5101 cagagctagc acgacgaggc agccgaaccg ggaagcgaat ttgtggcgtg tgtatggagt
     5161 agcccaaatg agcgatacgt ctagcctgac cgaactggcc cgtttcatcg gccagtcggg
     5221 acttgcgggg ggagcggcgg aacgccgcgc ggtcaacgac ctggatggac gcctcaagcg
     5281 cgctccggcc gcccggccgc gtgtttcgga cctgttgtcg gtggtgttga cactgtcggc
     5341 gcggacgcgc cgcgtggtca tgcccagggt cgagatcgac ctcgacgtgt tcgctcccgg
     5401 tggccagcgc gccgtgcgga tcctgcttcc cgaatgagct tgcgcctcag gcgctgagcc
     5461 gcgccgcagg catcgcctgc tggcccggcg accggcgcag ggcggcaggc tcggccacga
     5521 cgaggcggtt gcgaccgcgc gacttggcct catagaccgc ggcgtcggcg gcggcgagca
     5581 gcacatcggc ggcgatcggc tgcaggcttg cagcgatgcc gatgctgacg gtggccat
//
LOCUS       DATAZA010000372         3167 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1322456, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000372 DATAZA010000000
VERSION     DATAZA010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3167
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1322456"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..583)
                     /locus_tag="VHZ56_09415"
     CDS             complement(<1..583)
                     /locus_tag="VHZ56_09415"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HEX4298229.1"
                     /translation="MKIAILIAAYNAAPFIGDALASLLRQRDAAELDIIVVDDGSTDG
                     TGAILARVASEAPEVRIATTPNRGIARTRNELLRMLAPDTDLVTLLDADDLSPAGRLA
                     RDLERFAEDPGLDLTYGAARLFRLVGEDPLAPDPDGPMLDVRGVVLGCGLFRHSLIRR
                     VGSFDESFEQGEDMDFLFRVFELEPRYRLLDDIC"
     gene            complement(601..1704)
                     /locus_tag="VHZ56_09420"
     CDS             complement(601..1704)
                     /locus_tag="VHZ56_09420"
                     /inference="COORDINATES: protein motif:HMM:NF026257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEX4298230.1"
                     /translation="MTVRDIIAKLRTLTPAEPRGPFPSLAWAWPTGGRDLLLQAAIVA
                     DPAAAAAAFHRWYATHDFDGVTFSEQRLLVSISVRLPEGILEPGERNRLLGVERALWT
                     RAMLSFRASAPAFGDLAAAGIDSMILKGAAWSAIALSNLRGRYTDDLDILVRPADFQR
                     AWEVLQAAGWNSRFGATITGRTGVNLHLGDFGRLDLHRFAYHQMVLSEPRREELWERS
                     EIHRFFGHDVRIPSATNRLLMAIAHGGRDGHSHSDWLVDSAHLIRGGSVDWDLFVARS
                     RERGLDPPAAIALGYLAGPLGVAVPAEVLQALRQSAERGPLRLMGALVEGRPYRDHSA
                     VSRLARRVVRAHHRRQTQRVLRALDAPSVGPGG"
     gene            complement(1701..2384)
                     /locus_tag="VHZ56_09425"
     CDS             complement(1701..2384)
                     /locus_tag="VHZ56_09425"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HEX4298231.1"
                     /translation="MTAPAYTVVVPSYNAAGFIVETLRSVFAQSVPPSRVIVVDDGST
                     DTTGAVVAGFGHGVEVVRQDNTGPGGATTRGLALVDTEYVATLDHDDLWVPTKIAIQF
                     DCLARDRGVAGVFGRVAEFTADPRAANHDGAYDGWTRTTALFRTDVVAGAGPLKDYPG
                     RLGEMADWLARLREAGHRLVMLPDILALRRVHRDSLTNRDRHELSLSYLSAARDAMLR
                     RRTLRDAGP"
     gene            complement(2381..3046)
                     /locus_tag="VHZ56_09430"
     CDS             complement(2381..3046)
                     /locus_tag="VHZ56_09430"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HEX4298232.1"
                     /translation="MDYTVVIPAYNAGRFIADAVRSALAQTQPPVRVIVVDDGSTDAI
                     EGTIASLGSRVHLVRQEHSGPGAATTRGIGMVETGLLATLDADDIWLPGKLARQIDTL
                     EADPNLAGVFGRLANFRGDPESADYGHPYDGWSRTTMLVRTEIARAVGPVIDPPDSGD
                     MVDWLARLREAGHRLSMLPEILALRRVHEDSMTFRGRHEVAAGYISVARAAMLRRRAA
                     GPR"
BASE COUNT          527 a         1046 c         1162 g          432 t
ORIGIN      
        1 agcagatgtc gtcgagcagc cggtagcggg gctcgagctc gaagacgcgg aagagaaagt
       61 ccatgtcctc gccctgctcg aagctctcgt cgaacgagcc gacccggcgg atcagcgaat
      121 ggcgaaacag gccgcagccc agcaccacgc cacgaacgtc gagcatcggg ccatcgggat
      181 caggcgccag cgggtcctcg ccgacgaggc ggaacagacg cgcggcgcca taggtcaggt
      241 cgagaccggg gtcctcggca aacctctcca gatcgcgcgc caggcggccg gccggagaca
      301 gatcgtcggc gtcgagcagg gtcaccaggt cggtgtccgg cgccagcatg cgaagcagct
      361 cgttgcgggt gcgggcgatg ccccgattgg gcgtcgtggc gatccgcact tccggggcct
      421 cgctcgcgac ccgcgcgaga atagcgccgg tgccatcggt cgagccgtcg tcgacaacga
      481 tgatgtcgag ctcggccgca tcgcgctggc gcagcaggga ggccagcgca tcgccgatga
      541 acggcgccgc gttgtaggcg gctatgagga ttgcgatctt cacgatgtcc gccggagccg
      601 tcagccgccc ggcccgaccg agggtgcatc gagggcgcgc agcacccgct gcgtctgccg
      661 ccggtgatgg gctcgcacga cgcggcgcgc cagccggctg acggcagaat ggtcccgata
      721 cgggcggccc tccaccagcg cgcccatcag gcgcaggggt ccgcgctctg ccgactgccg
      781 gagcgcctgc aagacctcgg caggaacggc gaccccgagc ggtccggcga gatagccgag
      841 agcgatcgcc gcaggcggat cgagtccgcg ttcgcgcgac cgggcgacga agagatccca
      901 gtcgacgctg ccgccgcgga tcaggtgggc gctgtcgacg agccagtcgc tgtggctatg
      961 gccgtcgcgg ccaccgtgcg cgatggccat cagcaggcgg ttggtcgccg aaggaatgcg
     1021 gacatcgtgg ccaaagaacc gatggatttc gctgcgttcc cacaattcct cacgccgggg
     1081 ctccgacaag accatctgat ggtaggcaaa gcggtggagg tcgagccgcc cgaagtcgcc
     1141 gagatggaga ttgaccccgg tgcgtccggt gatcgtggcg ccgaagcgtg agttccaacc
     1201 ggctgcctgc agcacctccc aggcgcgctg gaagtcggcc gggcgcacga ggatatcgag
     1261 gtcgtcggtg tagcggccgc gcagattcga cagggcgatg gccgaccagg cggcgccctt
     1321 gaggatcatg ctgtcgatgc cggcggcggc gagatcgccg aaggccggag cgctggcgcg
     1381 gaaggacagc atggcgcgcg tccacaaggc tcgctcgacg ccgagcagcc ggttgcgctc
     1441 gccgggttcc aggatgcctt cgggcaggcg gacggagatc gagaccagca gccgctgctc
     1501 gctgaacgtc acgccgtcga aatcatgcgt cgcgtaccag cgatggaacg ccgcggcggc
     1561 cgcggcgggg tcggcgacga tcgcggcctg cagcagcaga tcgcgcccgc cggtcggcca
     1621 tgcccaggcg aggctgggga acggaccgcg cggctccgcc ggggtcaggg tgcgcagctt
     1681 ggcgatgatg tcacgaaccg tcatggcccg gcgtccctca gggtgcggcg gcgcagcatc
     1741 gcatcgcgcg ccgccgacag gtaggagaga ctaagctcgt gacggtcgcg gttggtaagg
     1801 ctgtcccgat gcacgcgccg caaagcgagg atgtcgggaa gcatcaccag ccgatgcccg
     1861 gcctcccgca accgcgccag ccagtccgcc atctcgccga gcctgcccgg gtagtccttg
     1921 agggggccgg cgccggcaac cacgtcggtg cgaaagagcg cggtggtgcg ggtccagccg
     1981 tcataggcgc cgtcgtggtt ggccgcgcgc ggatcggcgg tgaactcggc cactcgcccg
     2041 aagactcccg ccacgccgcg gtcgcgagcc aggcagtcga actggattgc gatcttggtc
     2101 ggcacccata gatcgtcgtg gtcgagggtc gccacatact ccgtgtcgac gagtgccaga
     2161 ccgcgggtcg tggcgccacc cggtccggtg ttgtcctgcc gcaccacctc gacgccgtgg
     2221 ccaaatccgg cgacgaccgc gccggtggta tcggtcgagc cgtcatcgac gacgatgacg
     2281 cgggagggag gcacgctctg ggcaaatacc gagcgcaggg tttcgacgat gaagccggcg
     2341 gcgttgtagg acggcacgac gaccgtatag gcgggcgcgg tcatcgcggc cccgctgcac
     2401 gccggcgcag catggcggca cgggcgacgc tgatgtagcc agcggcaact tcgtggcgac
     2461 cgcggaaggt catgctgtcc tcgtggacgc gacggagggc gaggatctcg ggcagcatcg
     2521 acaggcgatg gccggcctcg cggagacggg ccagccagtc gaccatgtcg ccggagtccg
     2581 gcggatcgat caccggtccg acggcgcgcg cgatttcagt gcggaccagc atggtcgtgc
     2641 gcgaccagcc atcgtacgga tggccatagt cggcgctctc cgggtcaccg cgaaaatttg
     2701 ccagtcggcc gaagacgccg gcgagattcg gatctgcctc cagagtgtcg atctgccgtg
     2761 cgagcttgcc ggggagccag atatcgtcgg catcgagcgt ggccagcagg ccggtttcca
     2821 ccatgccgat gccgcgcgtg gtggccgccc ccgggccgct gtgctcctgc cgcacaaggt
     2881 gtacgcggct gcccaaggaa gcgatcgtgc cctcgatcgc gtcggtcgag ccgtcgtcga
     2941 cgacgatgac gcgcaccggc ggctgggtct gcgcgagcgc cgaccgcacc gcatcggcaa
     3001 tgaagcgccc ggcgttatag gcgggaatga cgacggtgta gtccatcaga accagcccct
     3061 gtccagatcc gagccgtcga agtcgaagaa cttcggcggg acgcccggga tcttgtcgat
     3121 gcggcggcgg cgcgccgcgg cgtgcaaagc gcggctgaac tcgtggc
//
LOCUS       DATAZA010000373         1998 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3990657, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000373 DATAZA010000000
VERSION     DATAZA010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1998
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3990657"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..352
                     /locus_tag="VHZ56_09435"
     CDS             <1..352
                     /locus_tag="VHZ56_09435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX4298233.1"
                     /translation="FNSKMGAAAVSAFLTAVGGGFYAQFVSYIDPESVMGFQFSLLMA
                     LPAVVGGIGTLWGPVLGAVILIPLTELTRSFIGGSGRGVDLIVYGTLIVLISLARPEG
                     LVGLFTRRRKAPAR"
     gene            349..1080
                     /locus_tag="VHZ56_09440"
     CDS             349..1080
                     /locus_tag="VHZ56_09440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4298234.1"
                     /translation="MTALLETKGVWQRFGGLVANSDVSISVGRGEIVGLIGPNGAGKS
                     TLFNLIAGVLPPTQGSILFDGEDVTALPAAARCRRGIARTFQVVKSFETMTVIDNVIV
                     GALIRTTVMREARRKAHEVLEFAGLAARADVLASDLVPSEKRRLEVARALATEPKLLL
                     LDEVLTGLTPVEAQTGVELVRRVRASGVTVLMVEHVMEIVMPLVDRAIVLDLGKVLVE
                     GKPADIVRDPKVITAYLGDRHAVGA"
     gene            1064..1768
                     /locus_tag="VHZ56_09445"
     CDS             1064..1768
                     /locus_tag="VHZ56_09445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4298235.1"
                     /translation="MLSVHEVTTAYQGLVAISDVSIEVTKGEIVCVAGANGAGKSTLL
                     KSIAGAERPRSGTITFDGKRIDGKAQHLITADGIAYVPENRRLFPRLSVHDNLRLGSY
                     MYRGQTNRDEPLELIFNLFPRLSERLEQRAETLSGGEQQMLAIGRALMTRPRLLMLDE
                     PSQGIMPKLVDEIFAAVKRIRDTGLTVLIVEQRMAECLDIADRAYILQTGRVLMQGSA
                     SDIKGNPDVRKAYLGL"
     gene            complement(1861..>1998)
                     /locus_tag="VHZ56_09450"
     CDS             complement(1861..>1998)
                     /locus_tag="VHZ56_09450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HEX4298236.1"
                     /translation="IEELEETAKLYLLLRGLNPRYLSPEQVKDLTKVFGLELPEHPPH
                     H"
BASE COUNT          333 a          632 c          652 g          381 t
ORIGIN      
        1 gttcaattcc aagatgggcg cggccgcggt ctcggcgttt ctcactgcgg tcggcggcgg
       61 cttttatgcc cagttcgtct cctatatcga ccccgaaagc gtgatgggct ttcagttctc
      121 gctgttgatg gcgctgcccg ctgtggtcgg cggcatcgga accttgtggg ggccggtgct
      181 gggcgcggtg atcctgattc cgctcaccga gctgacgcgc tcgttcatcg gcgggtccgg
      241 ccgcggcgtc gacctcatcg tctacggcac cttgatcgtg ctgatttcgc tggcgcggcc
      301 ggaaggcctg gtcgggctgt tcacgcgacg gcggaaggcg cccgcgcgat gacggcactc
      361 ctggaaacca agggcgtctg gcagcggttc ggcggtctcg tcgccaacag cgacgtgtcg
      421 atctcggtcg gccgcggcga gatcgtcggc ctgatcgggc ctaacggcgc cggaaaatcc
      481 acgctgttca acctgatcgc gggtgtgctg ccgccgaccc agggctcgat cctgttcgac
      541 ggcgaggacg tcacagcgct gccggcggcc gcgcgctgcc ggcgcggcat cgcgcgcacc
      601 ttccaggtcg tcaaaagctt cgagaccatg accgtgatcg acaatgtcat tgtcggcgcg
      661 ctcatccgca ccacggtgat gcgcgaggcc cggcgcaagg cccatgaggt gctggaattc
      721 gccggccttg ccgcccgagc cgatgttctg gcgagcgatc tggtgccgtc ggaaaaacgc
      781 aggctcgagg tcgcccgcgc gctcgcgacc gaaccgaagc tgctgctgct cgatgaagtg
      841 ctgacgggcc tgaccccggt cgaggcgcag accggtgtcg aattggtgcg ccgggtccgc
      901 gcctccggcg ttaccgtatt gatggtcgag catgtcatgg aaatcgtgat gccgctggtc
      961 gatcgcgcca tcgtgctcga tctcggcaag gtgctggtcg agggaaaacc cgctgacatc
     1021 gtccgcgatc cgaaagtcat caccgcctat ctcggggatc gccatgctgt cggtgcatga
     1081 agtcaccacc gcctatcagg ggctggtggc gatctccgac gtcagcatcg aggtgacaaa
     1141 gggcgagatc gtctgcgtcg ccggcgccaa tggcgcgggc aagtcgacgc tgttgaaatc
     1201 gatcgcgggc gccgagcggc cgcgctccgg caccatcacc ttcgacggca agcggatcga
     1261 cggtaaggcg cagcatttga tcaccgccga cggcatcgcc tatgtgccgg aaaaccgccg
     1321 gctgtttccg cggctgtcgg tgcacgacaa tctgcggctc ggcagctaca tgtatcgtgg
     1381 tcagaccaat cgcgacgagc cgctggaatt gattttcaat ttgtttccgc ggctgtcgga
     1441 acggctggag cagcgcgcgg aaaccttgag cggcggcgag caacagatgc tcgcgatcgg
     1501 acgcgccttg atgacgcggc cgcggcttct gatgctcgac gaaccgtcgc agggcatcat
     1561 gccgaaactg gtcgatgaaa tcttcgccgc ggtcaaacgc atccgcgaca ccggtctgac
     1621 ggtgctgatc gtcgagcagc gcatggccga gtgcctcgac atcgccgatc gcgcctacat
     1681 cctgcaaacc ggccgcgtgc tgatgcaggg ctcggcttcc gacatcaagg gcaatccgga
     1741 cgtacggaag gcgtatttgg ggctgtagct tttccccatg cgcgcctcga aggatgagcc
     1801 gcacgcactc gtagccaccc ttcgaggctc gccgaagagg ctcgcacctc aggataacgt
     1861 ttagtggtgt ggcggatgct ccggcaattc cagtccgaac actttcgtca aatccttcac
     1921 ctgctccggt gacagatatc tcgggttcag tccgcgcagc agcagataca gcttcgcggt
     1981 ctcctccagt tcttcgat
//
LOCUS       DATAZA010000374         2014 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_394387, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000374 DATAZA010000000
VERSION     DATAZA010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_394387"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            50..331
                     /locus_tag="VHZ56_09455"
     CDS             50..331
                     /locus_tag="VHZ56_09455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HEX4298237.1"
                     /translation="MIKSELVQMLAAENPHLFQRDIENIVNAILDEVGNAMARGDRVE
                     LRGFGAFAVKNRPARLGRNPRTGEQVDVGEKYVPQFKAGKEIRERLNRT"
     gene            356..697
                     /locus_tag="VHZ56_09460"
     CDS             356..697
                     /locus_tag="VHZ56_09460"
                     /inference="COORDINATES: protein motif:HMM:NF018058.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapA family protein"
                     /protein_id="HEX4298238.1"
                     /translation="MMRRIVGWVVLVPLCLVLIVFALANRQLVVINFNPLVPSEALTT
                     PGVGVPMFLVLFTVLLFGVVIGGVATWFAQAPHRRDERAYRREAERLNREVDVMRRTP
                     GLPVVDDLAKP"
     gene            701..1354
                     /locus_tag="VHZ56_09465"
     CDS             701..1354
                     /locus_tag="VHZ56_09465"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004640 - phosphoribosylanthranilate
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEX4298239.1"
                     /translation="MNDPLIIKICGIKTQAILEAAIEAGADMVGFVHFARSPRHLELD
                     PIGELISLARGRAETCVLLVNPDNTLVAQVAALGPDWIQLHGPETPHRVETIRDEAGI
                     AILKACPIGSAEDVAAVAGFAECADRILLDAKAPQGATRPGGLGTTFDWSLLKALDPS
                     LSFMLSGGLTPDTVAAAIRATRPLGVDVSSGVEKSPGVKDAGLVRAFITNARSAAAS"
     gene            1359..>2014
                     /locus_tag="VHZ56_09470"
     CDS             1359..>2014
                     /locus_tag="VHZ56_09470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017962642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEX4298240.1"
                     /translation="MDHTDGDTHRANSLRTGPDDDGRFGIYGGRFVAETLMPLIRDLE
                     TAYLEARDDPAFIAEMADLRTHYAGRPSPLYFAGRLTAQLGGAKIYLKREELNHTGSH
                     KINNTLGQILLARRMGKTRIIAETGAGQHGVATATVCAKFDLPCVVFMGATDVERQWP
                     NVLRMKMLGAEVRPVTAGAGTLKDAMNEALRDWVTNVETTYYLIGTAAGPHPYPMMVR
                     "
BASE COUNT          332 a          727 c          641 g          314 t
ORIGIN      
        1 acaatttacc gtggtgggcg aatgcggcgg gacgccgggg ggcgggacga tgatcaagtc
       61 tgaactcgtg cagatgctgg cagctgaaaa tccgcatctg ttccagcggg acatcgaaaa
      121 catcgtcaac gccatcctcg acgaggtcgg caatgccatg gcgcgcggcg accgggtcga
      181 gctgcgcggc ttcggcgcct tcgccgtcaa gaaccgcccg gcccggctgg gccgcaatcc
      241 gcgtaccggc gaacaggtcg acgtcggtga gaaatacgtg ccgcagttca aggccggcaa
      301 ggagatccgc gagcgcctca accgcacctg agtggggtct ccggaacacg ctgcaatgat
      361 gagacgcatc gtcggttggg ttgtgctggt gccgctctgc ctcgtgctga tcgtctttgc
      421 cctcgccaac cggcagctgg tggtcatcaa cttcaatccg ctggtgccgt ccgaggcatt
      481 gaccaccccc ggcgtcggcg tgccgatgtt cctcgtgctg ttcacggtgc tgctgttcgg
      541 ggtcgtcatc ggcggcgtcg ccacctggtt cgcccaggcg ccgcaccggc gcgacgagcg
      601 tgcctaccgg cgcgaggccg agcggctcaa ccgcgaagtc gatgtgatgc gccggacgcc
      661 cggcctgccc gtcgtcgacg atctggcgaa gccctgacgc atgaacgatc ccctcatcat
      721 caagatctgc ggcatcaaga cccaagccat cctcgaggcc gccatcgagg ctggcgccga
      781 catggtcggc ttcgtgcatt ttgcccgttc gccccgccat ctcgagctcg acccgatcgg
      841 cgagctgatc tcgctcgccc gcggccgggc tgaaacctgc gtgctgctgg tcaatcccga
      901 caacaccctc gtggcgcagg tggcggcgct cggtcccgac tggatccagc tgcacgggcc
      961 ggaaaccccg caccgcgtcg aaaccatccg cgacgaagcc ggcatcgcca tcctcaaggc
     1021 ctgcccgatc ggcagcgccg aggacgtggc cgcggtcgcc ggctttgccg agtgtgccga
     1081 ccgcatcctg ctcgatgcca aggcgccgca gggcgcgacc cgccccggtg gcctcggcac
     1141 caccttcgac tggtcgctgc tcaaggcgct tgacccgtcc ctgagcttca tgctttccgg
     1201 gggcctcacc cccgacaccg tcgccgccgc catccgcgcg acgcggccgc tgggggtgga
     1261 cgtgtcgtcg ggcgtcgaga aatcgccggg cgtcaaggac gcgggcctgg tccgcgcctt
     1321 catcaccaac gcgcggtccg ccgcggcgag ctgaggccat ggaccacacc gacggcgata
     1381 cccaccgggc caactcgctg cgcaccggcc ccgacgatga cggccgcttc ggcatctatg
     1441 gcggccggtt tgtcgccgaa acgctgatgc cgctgatccg cgacctcgag accgcctatc
     1501 tcgaggccag ggacgatccc gccttcatcg ccgaaatggc cgacctgcgc acccactacg
     1561 ccggccgccc gtcgccgctg tatttcgccg gccggctgac ggcgcagctc ggcggcgcca
     1621 aaatctatct caagcgcgaa gagctcaacc acactggctc gcacaagatc aacaataccc
     1681 tcggccagat cctgctggcc cgccgcatgg gcaagacccg catcatcgcc gaaaccggcg
     1741 ccggccagca cggcgtcgcc accgccacgg tatgtgcaaa attcgacctg ccctgcgtcg
     1801 tcttcatggg cgccaccgac gtcgagcggc aatggccgaa cgtgctgcgc atgaagatgc
     1861 tcggcgccga ggtgcggccg gtgaccgccg gtgccggcac cctcaaggac gccatgaacg
     1921 aggcgctgcg cgactgggtg accaacgttg aaacgacgta ttacctgatc ggcaccgcgg
     1981 ccggcccgca cccctatccg atgatggtgc gcga
//
LOCUS       DATAZA010000375         5267 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4107417, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000375 DATAZA010000000
VERSION     DATAZA010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5267
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4107417"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(101..862)
                     /locus_tag="VHZ56_09475"
     CDS             complement(101..862)
                     /locus_tag="VHZ56_09475"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX4298241.1"
                     /translation="MEHAAGRQLPGPTGGLRSHVSASRQSRILVVEDDRDVAGLLARE
                     LRAGGHVVDVVEFAGDALSAARATDYALMIIDLGLPDGDGLDLVRDMRRRAIESPVLV
                     LTARRKVEDRVVGLAIGADDYMAKPFALPEVRARVAALLRRPSRIRESQPSVGNIVVD
                     CDALEAVVDGVSLPLARKQFQLLELLVRRKNHMTPKRMIEEALYGYDDDVCTNSIEAH
                     VSRLRRVLSLARAQAVIETRRGIGYRLVGLDSAAE"
     gene            981..1358
                     /locus_tag="VHZ56_09480"
     CDS             981..1358
                     /locus_tag="VHZ56_09480"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4298242.1"
                     /translation="MLIADDDPDILRALGFLMRREGYDVRTATDGEEALAAIASRSPD
                     LLLLDLMMPRGNGHDICRTLRADPANAGMRIVMLTAKGRPDDQKFGLALGADAYVTKP
                     FAIRDVVACVAGVLARPRPAGVA"
     gene            1362..1592
                     /locus_tag="VHZ56_09485"
     CDS             1362..1592
                     /locus_tag="VHZ56_09485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298243.1"
                     /translation="MLRRTARRDRLTGLFIAGVVFFDPPVLNLVGGSIGGWPVPYLYL
                     FGIWALLIAAAAYVSESGRTRADGRTGSPPDK"
     gene            1589..4342
                     /locus_tag="VHZ56_09490"
     CDS             1589..4342
                     /locus_tag="VHZ56_09490"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4298244.1"
                     /translation="MSQEVIIAVAIGYLLLLFAVAYFVEHSSGRLSRLTGSSVVYTLS
                     LAVYCSSWTFNGGVGRAAQSGIDFLPIYLGPTLAFCLGPILIRRILRISKANRITSIA
                     DLIGARFGRSGGLAALVTVIAVIGLIPYIALQLKSISSGFAALSAGPIAGVAADKPVL
                     ADEALWAAVVLAVFAMLFGSRSIRPGEHHPGIVVAVAVESIVKLVSLTAIGLFVGYGL
                     FHGFGDLFARAAAVPEINALFTPSPNRYGFGWIAMTLLAMLATFCLPRQFQVMVVENV
                     DERHLDRALWLFPLYLLGINLFVLPIAIAGRLLLPGDGNPDNLMLALPLLGGQPIFAL
                     IAFLGGVSAAAGMVVVETTALSLMVCNDVVMPMLLRIKSLGLSERSDLTSLLLWVRRA
                     VMAVVMALGYLYMRTDSAEFALVSIGLVSFVAVAQFAPAMIGGLFWHGATKAGAVAGI
                     TGGFIVWCYTLLLPSFAQSGAIAAQFVSDGPFGIALLRPYALFGLSGLDPVTHSAFWS
                     LLVNLGAFVAVSLVTEQRPVDRAHAATFLDADNPGDAAQVWRRTALVPDLMSLSARFL
                     GPARAEAAFADWARSRGIDPRTTLLADTETVLFHERLLAGVVGAASARVLVSAIVEEE
                     PLGVDEVMRILDETSRVIEANRALEDKSRALETATAELRRANARLQELDRLKDDFLAT
                     VNHELRTPLASIRAFSEILREHADLPAAERTEFLSIVVVESERLTRLINQLLDLSKVE
                     AADATSPDWGAVDLAPLARDSVAAMQQIFAARRVALDLRIVPAATEVRGDPDQLTQVL
                     INLLGNAAKFSPPVTGRAELSLKRIGDEVEIAVADNGHGIAPADRAIVFERFRQLGDT
                     MGDKPRGVGLGLAITQRIVDHHGGRIWIETAPGGGALFLIRLPALRSARIGTRLEDAP
                     ASA"
     gene            complement(4339..>5267)
                     /gene="solA"
                     /locus_tag="VHZ56_09495"
     CDS             complement(4339..>5267)
                     /gene="solA"
                     /locus_tag="VHZ56_09495"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: protein motif:HMM:NF008425.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050131 - N-methyl-L-amino-acid oxidase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HEX4298245.1"
                     /translation="RWRELERIAGEPLLTITGVLEVGRMDGTVVPGVLASCAQHDLPH
                     EMLDATEVTQRFPAFAMRPGDVAVLESEGGFLKPERAVAAALKRAGHAGAVLHFNEPV
                     TAIEPGDEGVTITTAAGRYRAAKVVVAAGSYVAGLVPTLAPYVRPIKQVVGWYPSRDP
                     LATALGRMPGFIVDEGEWSYFGFPDLGEGVKVGRHGHYRQEIDPELPNPPIDAADRAA
                     TEDFMARRMPGVVPTGTRFVSCRYTMLPDEDFLIDALPGEPRIIVASPCSGHGFKFAS
                     VVGDIVADLVTARGTDLPIARFSFAALHARAR"
BASE COUNT          742 a         2013 c         1637 g          875 t
ORIGIN      
        1 ctcatgatgg ccagatggtc agcttgcagg cgccggatga aatggccctc gggatcgagc
       61 gccgcgatct cctcggggct tggaggaacc ggcccgccca ctactcggcc gcgctgtcga
      121 gcccgaccag ccggtagccg atgccccgcc gcgtttcgat cacggcctgc gcccgagcca
      181 ggctcagcac ccgccgcagc cgcgagacgt gcgcctcgat cgaattggta cacacgtcat
      241 cgtcgtagcc gtagagcgcc tcctcgatca tccgctttgg ggtcatgtgg ttcttccgcc
      301 gcaccagcag ctcgagcagc tggaactgct tgcgggccag cggcaggctg accccgtcga
      361 ccaccgcctc gagcgcatcg cagtcgacca cgatgttgcc gacgctgggc tgcgattcgc
      421 ggatccgcga cggccggcgc agcagcgccg ccacccgcgc ccgcacctcc ggcagcgcga
      481 agggcttggc catgtagtcg tcggctccga tcgccagccc gaccacccgg tcctcgacct
      541 tgcgtcgcgc cgtcagcacc agcaccgggg attcgatcgc ccgccgccgc atgtcgcgca
      601 cgagatcgag cccgtcgccg tcaggcagtc ccagatcgat gatcatcagc gcatagtcgg
      661 tggcccgggc ggcgctgagc gcatcccccg cgaattccac cacgtcgacg acgtgccccc
      721 cggcccgcag ctcccgcgcc agcaggcccg cgacgtcgcg gtcgtcctcg accacgagga
      781 tgcgcgactg ccgcgacgcc gaaacatggc tccgcagtcc tcccgtcggc cctggcaact
      841 gcctgcccgc cgcgtgctcc atcgccacac ctcctcgcat gtcgatcctc gattgtggga
      901 gccttgtcgc ccaaacacaa gagggctacg gtttgcggac ggcgtggagg cgcccgagga
      961 ggaacatcat tccggcgtcc gtgctcatcg ccgacgacga tcccgacatc ctgcgcgccc
     1021 tgggcttcct gatgcggcgc gagggctacg acgtccgcac ggcaaccgac ggggaggaag
     1081 cgctcgccgc catcgccagc cgttcgcccg acctcctgct gctcgacctg atgatgccgc
     1141 gcggcaacgg ccacgacatc tgccgcaccc ttcgcgccga cccggccaat gctggcatgc
     1201 gcatcgtcat gctgaccgcc aagggtcgcc ccgacgacca gaagttcggc ctggcgctgg
     1261 gggcggacgc ctatgtcacc aagcctttcg ccatccgcga tgtcgtcgcc tgcgtggccg
     1321 gcgtgctggc ccggccgcgg ccggccggcg tggcctgagc catgctccgg cgcaccgcgc
     1381 gacgcgaccg cctgaccgga ctgttcatcg ccggggtggt cttcttcgac ccgcccgtcc
     1441 tcaacctcgt cggcggcagc atcggcggct ggccggtgcc ctacctctat ttgttcggca
     1501 tctgggccct gctcatcgcc gccgctgcct acgtgtccga gagcggccgc acgcgggccg
     1561 atggccgaac cgggagcccg ccggacaagt gagccaggaa gtcatcatcg ccgtggcgat
     1621 cggctacctg ctgctgctgt tcgccgtcgc ctatttcgtg gaacacagtt ccgggcggct
     1681 ctcgcgcctc accggctcga gcgtcgtcta caccctgtcg ctggcggtct actgcagctc
     1741 gtggaccttc aacggcggcg tcggccgggc ggcgcagtcg ggcatcgact tcctgccgat
     1801 ctatctcggc cccacgcttg ccttctgcct cgggccgatc ctcatccggc gaatcctcag
     1861 gatcagcaag gccaaccgca tcacctcgat cgccgatctc atcggcgccc gcttcggccg
     1921 cagcggcggc cttgccgcgc tggtgaccgt catcgccgtg atcggcctca tcccctatat
     1981 cgcgctgcag ctcaaatcga tctccagcgg ctttgccgcg ctgagcgccg gtccgatagc
     2041 tggcgtcgcc gccgacaaac cggtgctggc cgacgaagcg ctgtgggcgg cggtcgtcct
     2101 cgccgtcttc gccatgctct tcggcagccg ctcgatccgg ccgggcgagc atcatcccgg
     2161 catcgtcgtg gcggtcgccg tcgaatccat cgtcaagctc gtcagcctca ccgccatcgg
     2221 cctgttcgtc ggctacggtc tcttccacgg cttcggcgac ctcttcgccc gcgccgccgc
     2281 cgtgccggag atcaacgcgc tctttacccc ctcgcccaat cgctacggct tcggctggat
     2341 cgccatgacg ctgctcgcca tgctcgcgac cttctgcctg ccgcgccagt tccaggtgat
     2401 ggtggtcgag aacgtcgacg agcgccacct cgaccgcgcc ctctggctgt ttccgctcta
     2461 cctgctgggc atcaatctgt tcgtgcttcc catcgccatc gccggccggc tgctgctccc
     2521 cggcgacggc aatccggaca atctgatgct cgctttgccg ctgctcggcg gccagccgat
     2581 cttcgcgctc atcgccttcc tcggtggcgt ctcggccgcc gcgggcatgg tcgtggtcga
     2641 gaccacggcg ctgagcctca tggtctgcaa tgacgtcgtc atgcccatgc tgctgcggat
     2701 caagtcactg gggctgtccg agcgctccga cctcaccagc ctgctgctct gggtgcggcg
     2761 cgccgtcatg gccgtggtga tggcgctcgg ctacctctac atgcgcaccg acagtgccga
     2821 gtttgcgctg gtctcgatcg gcctcgtgtc cttcgttgcc gtggcccagt tcgccccggc
     2881 catgatcggc ggcctgttct ggcatggtgc caccaaggcc ggcgccgttg ccggcatcac
     2941 cggcggcttc atcgtctggt gctacaccct gctgctgccg tcctttgccc agtccggcgc
     3001 gatcgcagca cagttcgtca gcgatggacc gttcggcatc gccctgctgc gcccctacgc
     3061 gcttttcggc ctgagcggcc tcgatccggt gacccacagc gccttctgga gcctgctggt
     3121 caacctcggc gctttcgtcg ccgtatcgct ggtgaccgag cagcggccgg tcgatcgcgc
     3181 ccacgcggca accttcctcg acgccgacaa tccgggcgac gcggcgcagg tctggcgacg
     3241 caccgcactg gtgccggacc tgatgtcgct gtccgcccgt ttcctcggtc cggcgcgcgc
     3301 cgaagcggct ttcgccgact gggcccgctc gcgcggcatc gatccgcgca ccacgctgct
     3361 ggccgacacc gagaccgtgc tgttccacga gcggctcctt gccggcgtcg tcggcgccgc
     3421 atcggcccgc gtcctcgtca gcgccatcgt cgaagaggaa ccgctgggag tcgacgaggt
     3481 gatgcgcatc ctcgacgaga cctcgcgcgt catcgaggcc aaccgtgcgc tcgaggacaa
     3541 gtcgcgcgcg ctcgagacag cgaccgccga actgcggcgc gccaacgccc ggctgcagga
     3601 gctggatcgg ctgaaggacg acttcctcgc caccgtcaat cacgagttgc gcacgccact
     3661 cgcctcgatc cgcgccttct ccgaaatcct gcgcgagcac gccgacctgc cggccgccga
     3721 gcgcaccgag ttcctttcga tcgtcgtcgt cgagtccgag cggctgaccc gcctcatcaa
     3781 ccagctgctc gacctgagca aggtcgaggc tgcggatgcg acctcgccgg actggggcgc
     3841 cgtcgacctt gcacctctcg cccgcgattc cgtcgccgcc atgcagcaga tcttcgccgc
     3901 ccgccgcgtc gcgctcgacc tccgcatcgt cccggcggcg actgaagttc gcggcgaccc
     3961 cgaccagctc acccaggtgc tgatcaacct tctcggcaac gccgcaaaat tctctccccc
     4021 cgtaaccggc cgcgccgagc tcagcctcaa gcggatcggc gatgaggtcg aaatcgcagt
     4081 cgccgacaat ggccacggca tcgcgccggc cgatcgcgcc atcgtcttcg agcgcttccg
     4141 ccagctcggc gacaccatgg gcgacaagcc gcgaggggtt ggcctcggcc tcgccatcac
     4201 ccagcgcatc gtcgaccatc acggcggccg catctggatc gagactgccc cgggcggcgg
     4261 cgctctgttc ctcatccggc ttcccgccct tcgctccgcc cgaataggga cgcgcctgga
     4321 ggatgcacca gcctcggcct agcgggcccg tgcgtgcagc gccgcaaacg agaagcgtgc
     4381 gatcggcagg tcggtcccgc gcgccgtcac gagatcggcg acgatgtcgc cgacgacgct
     4441 ggcaaacttg aagccatggc ccgagcacgg cgaggcgacg atgatccgcg gctcgccagg
     4501 tagcgcgtcg atcaggaaat cctcgtccgg cagcatggta tagcggcagc tgacgaagcg
     4561 cgtgccagtc ggcaccacgc cgggcatccg tcgcgccatg aagtcttccg tcgcggcgcg
     4621 gtcggccgca tcgattggcg gattggggag ctccggatcg atctcctggc gatagtggcc
     4681 atggcggccg accttgaccc cctcgcccag atccggaaag ccgaaatagc tccattcgcc
     4741 ttcgtcgacg atgaagcccg gcatccgccc cagcgccgtc gccaacggat cgcgcgacgg
     4801 ataccagccg accacctgct tgatcggccg cacatacggc gccagcgtcg gcaccagccc
     4861 cgcgacatac gaaccggctg cgacgaccac tttcgccgcc cggtagcggc ccgccgcggt
     4921 cgtgattgtc acgccctcgt cgccgggttc gatcgccgtc acgggctcgt tgaaatgcaa
     4981 cacggcgcct gcatgtcccg ctcgcttgag ggcggcggca acagctcgct ccggcttgag
     5041 gaacccgccc tccgactcga gcaccgcgac gtcgccggga cgcatcgcga acgccgggaa
     5101 ccgctgcgtg acctccgtcg catccagcat ctcgtgcggc aggtcgtgct gggcgcagga
     5161 ggcgagcacg ccgggcacca ccgtgccgtc catccggccc acctcgagca cgccggtgat
     5221 cgtcagcagc ggctcgcccg cgatgcgctc cagctcccgc cagcgcc
//
LOCUS       DATAZA010000376         5379 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3296890, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000376 DATAZA010000000
VERSION     DATAZA010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5379
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3296890"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..764)
                     /locus_tag="VHZ56_09500"
     CDS             complement(<1..764)
                     /locus_tag="VHZ56_09500"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEX4298246.1"
                     /translation="MTMSVFTRLAAALAIASLPALAAAPALASDSSVTALIAQARAGN
                     VSDWLAHRLSATERGDALSELAAADEPDALVLAIGAGLEPDAINSAGTDALISAIAAD
                     SSRSVETLLRAGASPTLPTRFGPPGQFAASVGSAEIVALFARSGALDIGTRLLQAAQD
                     DDVATLAPLLRAGASPDSQGPGQLTPLMAAVLDGAHNAVAALLAAGAQTELVDAHGLT
                     ALAMAVMADDPGSVNALLAAHADPSAKISGTPILSLA"
     gene            complement(761..1828)
                     /locus_tag="VHZ56_09505"
     CDS             complement(761..1828)
                     /locus_tag="VHZ56_09505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298247.1"
                     /translation="MLSKAAIAILPALLAAWTASAAASPGYPLDPIGPSEPTACAALY
                     QQYTALGHGLVAAGRDAGDRAWNILRGADTSSTPAADKLYGDAREAFAGATQTLADGA
                     SARQRCLRQVNAFRAAHAGSPGLLGGPADARILHLAGNALDLLRRNSDGAANVPAAGA
                     LTILGAYADLAGARATLLGSALDAGPLPVGRSSGTLVGGTLAAIVEIDRAASDRLADA
                     QDAAFANADDDFSARVLVAADHRGTLLSTEPKSPDGGNPIGANALVALAIAANFNADH
                     AAAALHELGSDAPPPPAAPDAGLAEAQCGQLAARIATDQQAILALEINLATASLPGGA
                     DRQRLEAVRQQNQALYDGGCP"
     gene            complement(1960..3201)
                     /locus_tag="VHZ56_09510"
     CDS             complement(1960..3201)
                     /locus_tag="VHZ56_09510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006727553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX4298248.1"
                     /translation="MTAFSISTDTRRATAKPRDAAFYQNPYAFYAALHLGTPTFLWED
                     YGHWCFSGFREVSALLRDKRFGREILHVMTRQELGWPPPKDHTAAFDLTEKYSLLALE
                     PPAHTRLRTLVNRAFVSRHVTQLRPRIERLANEIVDRLEPDGGAELIKAFAAPIPAVV
                     IAEMIGLPAEMAPQLLNWSNRMVQMYMYGVTRDTELDANRASEDFMAYLREVLAERRR
                     TPREDLLTHMLTADPVDGQKLTEDEVISTAILLLNAGHEATVHTTGNAIKTILESGLD
                     PKTLFADDARTEATVEECLRFDAPLHMFTRYALADVTLDSGQSFRKGETIGLLLGAAN
                     RDPTRFRDADRFDPFRVDGQNVSFGAGIHFCIGAPLARIELQVALSTLFRRLPKLKLA
                     GEPRYNNVYHFHGLERLDVTW"
     gene            3316..4065
                     /locus_tag="VHZ56_09515"
     CDS             3316..4065
                     /locus_tag="VHZ56_09515"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase domain-containing protein"
                     /protein_id="HEX4298249.1"
                     /translation="MKKLDFIVCGVQKAGTSTLHALLGTHPGIALPDKKELHFFDSAM
                     VDWRAPDYRPYHAHFGAADPARLWGESTPVYVFRPEVLPRIRAYRADIKLIVVFRDPV
                     DRAYSHWCMNIASGLETLPFAEAVREDGRARAGSGNASDFNRFSYVERGFYGEQLQRL
                     LSLFPRENVLALDFERIRSGQAALFADVCDFLGLPRPAEAPPQMHRLRRPALQYPPAP
                     TPADRRYLEEIFAADAQTFATLSGFSTQRAA"
     gene            4206..4832
                     /locus_tag="VHZ56_09520"
     CDS             4206..4832
                     /locus_tag="VHZ56_09520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HEX4298250.1"
                     /translation="MRDPVDTYYNYLVPTVVEQTNRGERAFDIYSRLLKERIIFVTGP
                     IEDNMSSLVIAQLLFLESENPKKEINLYINSPGGVVTSGLAVYDTMQFIRPPVATLCV
                     GQAASAASLLLTAGEKGMRAALPNASIMVHQPSGGYQGQATDIMIHAQFTEKLKRRLN
                     EIYVKHTGQDYDTIHQALERDNFLSVEQAKDFGLIDAIFEKRATPENT"
     gene            5003..>5379
                     /locus_tag="VHZ56_09525"
     CDS             5003..>5379
                     /locus_tag="VHZ56_09525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008547851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ClpX C4-type zinc finger protein"
                     /protein_id="HEX4298251.1"
                     /translation="MSKEASTGESKNTLYCSFCGKSQHEVRKLIAGPTVFICDECVEL
                     CMDIIREENKTSMVKSNDGVPTPAEICKILDDYVIGQKRAKRVLSVAVHNHYKRLHHA
                     TKNQDVELSKSNILLVGPTGTGKT"
BASE COUNT          878 a         1676 c         1951 g          874 t
ORIGIN      
        1 gcgagcgaca ggatcggcgt tccggagatt tttgcgctgg ggtcggcatg cgcggcgagc
       61 agcgcgttga ccgagccggg gtcgtcggcc atcaccgcca tggcaagggc ggtgaggcca
      121 tgcgcgtcga ccagctcggt ctgggctccg gcagcgagca gggcagccac ggcgttgtgc
      181 gcgccgtcga gcaccgccgc catcaggggc gtcagctgtc ccggaccctg gctgtcgggc
      241 gaggcgccgg cgcgaagcag cggcgcgagt gtggcgacgt cgtcgtcctg cgcggcctgc
      301 agcagccggg tgccgatatc gagcgcgccg cttcgcgcaa acagcgcgac gatctcggcc
      361 gacccgacgc tcgcggcaaa ctggccgggc gggccgaagc gggtcggcag ggtggggctg
      421 gcgccggccc gcaacagggt ctcgacgctg cgggagctgt cggcggcgat ggccgaaatc
      481 agcgcatcgg tgccggccga attgatggcg tccggctcca gcccggcgcc gatcgccaga
      541 accagtgcat cgggctcgtc ggcagctgcg agctcgctca gggcgtcgcc gcgctcggtc
      601 gccgacaggc ggtgcgccag ccagtcggag acgttgccgg cgcgggcctg ggcgatcagc
      661 gcggtgacgc tggagtcgga ggcgagggcg ggtgcagccg cgagggccgg taaactggcg
      721 atcgcgaggg cagcggcgag gcgggtgaaa acagacatgg tcatgggcat ccgccgtcgt
      781 aaagggcctg gttctgttgc cggacggctt cgagcctctg gcgatcggcg ccgccgggga
      841 gactggcggt ggcgaggttg atttcgagcg ccaggatcgc ctgttggtcc gtggcgatgc
      901 gggcggcgag ctggccgcat tgcgcctcgg ccagcccggc gtcgggcgct gccgggggtg
      961 gcggcgcatc gctgccgagc tcatgcaatg ccgcggcggc gtgatcggcg ttgaaattgg
     1021 cggcgatcgc cagcgcgacc agcgcgttgg cgccgatcgg gttgccgccg tcgggcgatt
     1081 tgggctcggt cgacaacagg gtgccgcgat ggtcggcggc aaccagcacg cgtgccgaga
     1141 aatcgtcgtc ggcgttggcg aaggcggcgt cctgcgcgtc ggccaggcgg tcgctcgcgg
     1201 cgcggtcgat ctcgacgatg gcggcaagcg ttccgccgac cagcgtgccg gaactccggc
     1261 caaccggaag cggtccggca tccagcgccg accccagcag ggtagcgcgg gcgccggcaa
     1321 ggtcggcata ggcgccgagg atggtcaggg cgccggcggc cgggacgttt gccgcgccat
     1381 cgctgttgcg acgcagcagg tcgagggcgt tgccggcgag gtgcaggatg cgggcgtcgg
     1441 cggggccgcc gagaagcccg ggcgagccgg cgtgggcggc gcgaaaggca ttgacctgcc
     1501 gcaggcagcg ctgccgggcg gatgccccat cggccagcgt ctgcgtggcg ccggcaaacg
     1561 cctcacgggc gtcgccgtag agcttgtcgg ccgcaggcgt ggacgaggtg tcggcgccgc
     1621 gaaggatgtt ccaggcccgg tcgcccgcat cgcgtcccgc ggcgaccagg ccgtgcccga
     1681 gtgcggtata ttgctggtag agggcggcgc aggcggtggg ttcggacggc ccgatcggat
     1741 cgagcggata gcccggcgac gccgcggccg aagctgtcca tgcggccagc agcgccggca
     1801 ggatggcgat cgcggccttg ctgagcattc ggggcatccc cgcgggattg tgggtgccgc
     1861 agttttcccg aaaacccgat ggcaaacaat ggcctcgcgg ccgtcattgc tccacatggt
     1921 gaacgtcgcg ggccgtcacg cgaccggcgg cagggcgcct caccaggtga cgtcgagccg
     1981 ttcgaggccg tggaaatgat agacgttgtt gtagcgcggc tcgccggcga gcttcagctt
     2041 cggaagtcgc cggaacaggg tcgacagggc gacctgcagc tcgatgcggg ccagcggggc
     2101 gccgatgcag aaatggatgc cggccccgaa gctgacgttc tggccgtcga cgcggaacgg
     2161 atcgaagcgg tcggcgtccc tgaagcgggt cgggtcgcgg ttggcggcgc ccagcaacag
     2221 gccgatcgtc tcgcccttcc tgaacgactg gccggagtcc agcgtcacgt cggcgagcgc
     2281 atagcgcgtg aacatatgga gcggcgcatc gaagcgcagg cactcctcga cggtcgcctc
     2341 ggtccgggcg tcgtcggcga acagggtttt ggggtcgagg ccgctttcga ggatggtctt
     2401 gatggcattg ccggtggtgt ggaccgtcgc ctcgtggccc gcattgagca gcaggatggc
     2461 ggtcgagatc acctcgtctt cggtcagctt ctggccgtcg accggatcgg cggtcagcat
     2521 gtgggtgagg aggtcctccc tgggcgtccg gcggcgttcc gccagcacct cgcgcagata
     2581 ggccatgaag tcctcggacg cgcggttggc gtcgagttcg gtgtcgcggg tgaccccgta
     2641 catgtacatc tggaccatgc ggttggacca gttcagcagc tgcggcgcca tctcggcggg
     2701 aaggccgatc atctcggcga tcaccactgc cgggatcggc gcggcgaacg ccttgatcag
     2761 ctcggcgccg ccatcgggtt cgagccggtc gacgatctcg ttggcgagcc gttcgatacg
     2821 gggccgcaac tgcgtgacat gccgtgacac aaaggcacgg ttgaccagcg tccgcagccg
     2881 ggtgtgggct ggtggctcga gcgccagcag cgaatatttc tcggtcaggt cgaacgccgc
     2941 ggtgtggtcc ttcggcggcg gccagccgag ctcctggcgg gtcatgacgt ggaggatttc
     3001 gcgaccgaaa cgcttgtcgc gaaggagggc gctcacctcg cggaaaccgc tgaagcacca
     3061 atgaccgtag tcctcccaga ggaacgtcgg cgtgccgagg tggagcgccg catagaaggc
     3121 gtaggggttc tggtagaacg ccgcgtcgcg gggcttcgcg gtggcgcggc gggtgtcggt
     3181 cgaaatggaa aaggcggtca tcgcttcggc acggaaagtt gatcgcgaca ccataggtca
     3241 tcggcttgtc gggtcaaaca gcggcgagcc acactgcgtc gggggaggag ggctccatcc
     3301 acatgtggca ctcaattgaa gaaactggat tttatcgtct gcggcgtgca gaaggccggg
     3361 acgtcgaccc tccacgcgct gctcggcacg catcccggca tcgccctgcc ggacaagaag
     3421 gaactgcact tcttcgattc ggcgatggtc gattggcggg cacctgacta ccggccctac
     3481 cacgctcatt tcggggccgc cgatccggcg cggctctggg gcgagtcgac accggtctat
     3541 gtgttccgcc cggaagtgct gccgcggatt cgggcgtacc gggccgacat caagctgatc
     3601 gtggtgttcc gcgatccggt ggaccgggcc tattcgcact ggtgcatgaa catcgccagc
     3661 gggctcgaga cgctgccttt cgcggaggcc gtgcgcgagg acgggcgggc tcgcgccggt
     3721 tcgggcaatg cgtcggattt caaccgcttc tcctacgtcg agcgtggttt ctacggcgag
     3781 cagctgcagc ggctgctgag cctgtttccg cgggagaacg tactggcgct cgatttcgag
     3841 cggattcgca gcgggcaggc ggcgctgttc gccgacgtct gcgatttcct cgggctgcca
     3901 aggcccgccg aagcaccacc gcagatgcat cggctgcgcc ggcccgcgct gcagtatccg
     3961 ccggcgccga cccctgccga ccggcgctac ctcgaggaga tctttgcggc cgacgcgcag
     4021 accttcgcga cgctcagcgg attcagcacg cagcgggcgg cctgaccgtt tgggcagggt
     4081 gcgggcgggg cggcttgccc gccgccacag tcccgcctat ctgtgccttt accgggcctt
     4141 aaggcgacct cgtctcagtt cggccattcg cgccgattcg gcattcaatc tcaggggcaa
     4201 ttggaatgag agatcccgtc gacacctatt acaactacct ggtgcccacc gtggtcgagc
     4261 agaccaatcg gggcgagcgg gcgttcgaca tctattcgcg cctgctgaag gagcggatca
     4321 ttttcgtgac cgggccgatc gaggacaaca tgagctcgct ggtgatcgcc cagctgcttt
     4381 tcctcgagtc cgagaacccg aagaaggaaa tcaacctcta catcaactcg ccgggcggcg
     4441 tcgtgacttc gggcctggcc gtgtacgaca ccatgcagtt catccggccg ccggtcgcga
     4501 ccctgtgcgt cgggcaggcg gcgtcggcgg cttcgctgct gctgacggcg ggcgaaaagg
     4561 gcatgcgggc ggcgctgccc aatgcctcga tcatggtcca ccagccctcc ggcggctacc
     4621 aggggcaggc gaccgacatc atgatccacg cccagttcac cgagaaactg aagcgccggc
     4681 tcaacgaaat ctacgtcaag cataccggcc aggactacga cacgatccac caggcgctgg
     4741 agcgcgataa tttcctcagt gtcgagcagg ccaaggattt cgggctgatc gacgcgatct
     4801 tcgagaagcg tgcgacgccc gagaacacgt aaaatcccgg gcgttaaggt tgtcgcgatc
     4861 ggggacggga gtgtggcact cccgtcattg tgacgagcgg aacggctcgc taaggtcgtt
     4921 gctacaacat attctttatg tctcctgcgt tagcgttcca gatggcgcag gtcggcggag
     4981 gcgaagcctc caggagtgac ggatgtccaa agaagcttcc accggcgaaa gcaagaatac
     5041 gctgtattgc tcgttctgcg gcaagtctca gcacgaagtc cgcaaattga tcgccggccc
     5101 gaccgtattc atctgcgacg agtgcgtcga actctgcatg gatatcatcc gcgaggaaaa
     5161 taaaacctcg atggtgaagt ccaatgacgg ggttccgacc ccggcggaga tttgcaagat
     5221 cctggacgat tacgtgatcg gccagaagcg cgccaagcgc gtgctgtcgg tcgccgtgca
     5281 caaccactac aagcggctgc atcacgcgac caagaatcag gacgtcgagc tgtcgaagtc
     5341 gaacatcctg ctggtcggcc cgaccggcac cggcaagac
//
LOCUS       DATAZA010000377         5463 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2367955, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000377 DATAZA010000000
VERSION     DATAZA010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5463
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2367955"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..973
                     /locus_tag="VHZ56_09530"
     CDS             <1..973
                     /locus_tag="VHZ56_09530"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130946.1"
                     /note="catalyzes the formation of D-ribulose 5-phosphate
                     from 6-phospho-D-gluconate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HEX4298252.1"
                     /translation="EAQWKNAQPILEAISAKFNGEPCCAYLGQGGAGHFVKTIHNGIE
                     YGDMQMIAEVYGVMRDGLGLAPKEASDVFKGWNKGPLNSYLIEITGYVLEAIDPRTGK
                     PLVELILDKAGQKGTGMWSVIAAQQLGVPATAIEGAVAARSISSRKDERVAAEKAYGK
                     RSAGKADVPLAELEKALLAGKIVSYAQGFAVLAKASEENGWNLPLATIAKIWRNGCII
                     RSRFLDQMSAAYAKGEATNLLMVPDFIAIMKDAHKSLRKIVAAGAIGEFPLICLSASL
                     AYFDSYRQALGTANLTQGQRDFFGAHGFELVDRPGEQHGTWPSTIGK"
     gene            complement(1006..2352)
                     /locus_tag="VHZ56_09535"
     CDS             complement(1006..2352)
                     /locus_tag="VHZ56_09535"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TCR/Tet family MFS transporter"
                     /protein_id="HEX4298253.1"
                     /translation="MADEPRKDSPLTLACILVTILLDMVGYGIIVPVLPELIKQLTGG
                     GVAEAAVFGGWLVFVYASMQFIFSPVLGNLSDRFGRRPVLLGSLLGLTFDYSMMGFAP
                     VVWYLFIGRFVSGVAGAAVATATAYMADITDPRKRTQRFGLIGAAFGLGFIIGPIVGG
                     ELGEFGPKVPFYAAACLAFANFLFGLFVLPESLDKQHRRPFNIRRANPFGALLSLRKF
                     PVVLWLMLALFLFTTAAQAFPSVYNYFTIEVFNFSSSQIGRTLGLFGIVFALFQAFGV
                     GPLVKRFTETPVVVVGMLAAVVAFTGIAFIHHEQWVYVYIVIGAVSGLAAPAINGVLS
                     RQVPDNAQGELQGAVNAANSLATIIGPLAATQIFAYFTYGEGSPGYFPGAPFVFAAII
                     TVCAVLLFTGIALRFDLGHKPSMAAHPKVPEMSPPGQMHVPKPTKHDAADEPVPPI"
     gene            complement(2419..3648)
                     /locus_tag="VHZ56_09540"
     CDS             complement(2419..3648)
                     /locus_tag="VHZ56_09540"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX4298254.1"
                     /translation="MANTGRTIYIAGAGIAGMTLALALAKFGATVIVLERNKKVQEVG
                     AGLQISPNARRVLNQLGLDKAIAARSFEPTGIDVHPFRAEQPLVSLALGPAMRERYGA
                     PYAVMHRADLADALFRACKRFASIDMLFGVRSYDAVTHARGISISVEEASGSTRTARV
                     HAFVGADGVHSETRTRVLGGPAATYSGYVAWRTTLSADLLGGVLAPDRTTLLLAPGYH
                     AVCYPLPHRKQVNIALFAREKAERLAEAQPPKEPKLPWAALPSKAFEAITSAAKGAWG
                     YWVVDTVETPSWGDGGIGLIGDAAHAMLPFQAQGAAMAIEDAAILAPLLMTEPDAASA
                     FRRFEAMRRARVERVRRLSNANGFAFHMEWPFTLGRNAVIWAQGPRGHLRRLDWLYRF
                     DAAPEPPVPPPDRTARD"
     gene            complement(3656..3901)
                     /locus_tag="VHZ56_09545"
     CDS             complement(3656..3901)
                     /locus_tag="VHZ56_09545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HEX4298255.1"
                     /translation="MAHAETPHFHNTEGLKRIQVGSKEFMCVGALPPFDHPHVYIDMG
                     KDDEIVCPYCSTHYVFNSTLMPGTSEPLSAVFQAEHA"
     gene            complement(3950..4474)
                     /locus_tag="VHZ56_09550"
     CDS             complement(3950..4474)
                     /locus_tag="VHZ56_09550"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4298256.1"
                     /translation="MIVSDPLFGFAAAADATAVAALVERAYRGPAAERSWTNEFGILS
                     GPRSSLAEVEKLIGDPGSRFVVASRDRQLIGCALLQRYHHGAYFSMFAIDPDAQGGGL
                     GKAVVARCETAARELWSARFLRLTVISLREELIAWYERRGFVRTGEREPFPFGAFSGA
                     LRTDFDLVVLEKPL"
     gene            4533..5285
                     /locus_tag="VHZ56_09555"
     CDS             4533..5285
                     /locus_tag="VHZ56_09555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008122969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX4298257.1"
                     /translation="MPTFISDGIDLAYDIYGEGRPILLIHGFASSGAINWLDTGWVSA
                     LNAAGWQAITIDNRGHGASRKLYDPKLYFAHDMADDAARLLDRLGHETLPVMGYSMGA
                     RISAYLALRHPERVKCAVWGGMGYDLVTGPDTSEEIIAALTAESLADVKGAIGRQFRI
                     FADHSKSDRAALAACMLSSREPMAAADLHRIVQPTLVAVGETDDMVREPQRLADALPH
                     GEVFIVPKRNHMLATGDPRFKAAAMAFLARNG"
BASE COUNT          976 a         1797 c         1873 g          817 t
ORIGIN      
        1 cgaggcgcag tggaagaacg cccagccgat cctcgaggcg atctcggcca agttcaacgg
       61 cgagccgtgc tgcgcctatc tggggcaggg cggcgccggc catttcgtca agaccatcca
      121 caacggcatc gagtatggcg atatgcagat gatcgccgag gtctatggcg tcatgcgcga
      181 tggcctcgga ctggcgccaa aagaagcctc cgatgtcttc aagggctgga acaagggccc
      241 cctcaattcg tacctgatcg agataacggg ttatgtgctc gaggcgatcg atcccaggac
      301 gggcaagccg ctggtcgagc tgatcctcga caaggccggc cagaagggca ccggcatgtg
      361 gtcggtgatc gccgcccagc agctcggcgt cccggcgacc gcgatcgaag gcgccgtggc
      421 cgcccgttcg atctcctcgc gcaaggacga gcgcgtcgcc gccgagaagg cgtacggcaa
      481 gcgcagcgcc ggcaaggcgg atgtgccgct cgccgaactc gagaaggcgc tcctcgccgg
      541 caagatcgtt tcctacgcgc agggttttgc cgtgctcgcc aaggccagcg aggagaacgg
      601 ctggaacctg ccgctcgcca ctatcgccaa gatctggcgc aacggctgca tcatccgctc
      661 gcgcttcctc gaccagatgt cggcggccta cgccaagggc gaagcgacga acctgctgat
      721 ggtgcccgat ttcatcgcca tcatgaaaga cgcgcacaaa tcactgcgca agatcgtcgc
      781 cgccggcgcc atcggggagt tcccgctgat ctgcctcagc gcctcgctcg cctatttcga
      841 cagctatcgg caggcgctcg gcaccgcgaa cctcacgcag ggccagcgcg atttcttcgg
      901 ggcccacggc ttcgagctgg tcgaccgccc cggcgagcag cacggcactt ggccgagcac
      961 gatcggcaag tagcgtcggc cgcgtccgtc gcggcatccc ccgagtcaga tcgggggaac
     1021 cggctcgtcg gcagcatcgt gcttggtggg cttgggcacg tgcatctggc cggggggcga
     1081 catctccggg accttggggt gggccgccat gctgggcttg tggccgaggt cgaaacgcag
     1141 cgcgatcccg gtaaacagca gcaccgcgca gacggtgatg atcgccgcga acacgaacgg
     1201 ggcgcccggg aaatagcccg gcgagccttc gccataggtg aagtaggcga agatctgcgt
     1261 cgccgcgagc ggcccgatga tggtggcgag cgagttggcg gcgttgaccg caccctgcag
     1321 ctcgccctgc gcgttgtcgg gcacttgccg cgacagcacg ccgttgatgg ccggtgcggc
     1381 gaggccgctc accgcgccga tcacgatgta gacgtagacc cattgctcat ggtggatgaa
     1441 ggcgatgccg gtgaacgcga ccaccgccgc cagcatgccc acgaccacca ccggggtttc
     1501 ggtgaagcgc ttgaccagcg ggccgacgcc gaaggcctgg aacagggcga agacgatgcc
     1561 gaacagcccc agtgtccggc cgatctgcga ggatgagaag ttgaacacct cgatcgtgaa
     1621 gtagttgtag accgacggga acgcctgcgc cgcggtggtg aacaggaaca gcgccagcat
     1681 cagccacagc acgaccggga atttgcgcag cgacagcagc gcgccgaagg ggttggcgcg
     1741 gcggatgttg aacggccggc gatgctgctt gtcgaggctc tcgggcagca cgaacaggcc
     1801 gaacaggaag ttcgcgaagg cgaggcacgc cgccgcatag aacggcacct tcggcccgaa
     1861 ctcgccgagc tcgccgccga cgatcgggcc gatgatgaaa ccgagcccga aggccgcgcc
     1921 gatcagcccg aagcgctgcg tccgcttccg ggggtcggtg atgtcggcca tgtaggccgt
     1981 cgcggtcgcc accgctgctc ccgcgacacc cgacacgaac cggccgatga acaggtacca
     2041 gacgaccggg gcgaacccca tcatcgaata gtcgaaggtg aggccaagca acgatcccag
     2101 cagcaccggg cggcggccga agcggtcgct gaggttgccg agcaccggcg aaaagatgaa
     2161 ctgcatcgag gcgtagacga acaccagcca gccgccgaac accgccgcct cggcgacgcc
     2221 gccgccggtc agttgcttga tgagctcggg cagcaccgga acgatgatgc cgtagcccac
     2281 catgtccagc aggatggtga caaggatgca ggcgagggtg agtggcgaat ctttacgtgg
     2341 ttcgtcggcc atcgggcgtt cttggttgag tgcggcagtt gacacaggcg ttcgggcaag
     2401 cgcaagcgct aagcccggct agtcccgggc tgtgcggtcg ggcgggggca ccggcggttc
     2461 cggcgcggca tcgaaccggt agagccagtc gagccgccgc aaatgaccgc gcgggccctg
     2521 cgcccagatc acggcgttgc ggcccagggt gaacggccac tccatgtgga acgcaaagcc
     2581 gttggcgttg gacagccgcc gcacccgctc cactcgcgcg cggcgcatcg cctcgaagcg
     2641 ccgaaacgcc gaggcggcat ccggctccgt catcagcagc ggcgcgagga ttgcggcgtc
     2701 ctcgatcgcc atcgctgcgc cttgcgcctg gaacggcagc atggcgtggg cggcgtcgcc
     2761 gatgaggccg atcccgccgt cgccccaact cggcgtctcc accgtgtcga ccacccagta
     2821 gccccaggcc cccttggcgg ccgacgtgat ggcttcgaac gccttcgacg gcaaggccgc
     2881 ccagggcagc ttcggctcct tcggtggctg cgcctcggcg aggcgttcgg ccttctcgcg
     2941 ggcaaagagc gcgatattga cctgcttgcg gtgtggcagg gggtagcaca ccgcgtggta
     3001 gccgggcgcc agcagcagcg tcgtgcggtc gggcgcgaga acgccgccga gcaggtcggc
     3061 gctgagcgtc gtccgccatg ccacatagcc cgaataggtc gcagccgggc cgcccaggac
     3121 gcgcgtgcgg gtttccgaat ggacaccatc ggcgccgaca aaggcatgga cgcgggctgt
     3181 tcgcgtggag ccgctcgcct cttcgacgga gatcgaaatg ccgcgcgcat gcgtcactgc
     3241 gtcgtaggag cgaaccccga acagcatgtc gatactggcg aaccgcttgc aggcgcgaaa
     3301 cagcgcgtcg gcgaggtcgg cgcggtgcat caccgcatag ggtgcgccgt agcgttcccg
     3361 catcgccggt ccgagcgcca ggctgaccag cggctgttcg gcccggaaag gatgcacgtc
     3421 gatgccggtc ggctcgaagc tgcgggcagc gatcgccttg tcgaggccga gctggttgag
     3481 gacgcgccgg gcattcgggc tgatctgcag gcccgcgccg acctcctgca ccttcttgtt
     3541 gcgctcgagc acgatgacgg tcgcgccgaa cttggcgagc gccagtgcca gcgtcatccc
     3601 ggcgatgccg gcgcctgcga tgtagatggt gcggccagta ttggccatgt ggagatcagg
     3661 cgtgttcggc ctggaagacc gccgacagcg gctccgacgt gcccggcatc agcgtcgaat
     3721 tgaacacata atgcgtcgag caataggggc agacgatctc gtcgtccttg cccatgtcga
     3781 tatagacgtg cgggtggtcg aacggcggca gcgcccccac gcacatgaat tccttgctgc
     3841 ccacctggat gcgcttcagt ccctcggtgt tgtggaagtg cggggtctct gcatgggcca
     3901 tcggggtctc gcgagtcagc tgcggtggaa cggccggacc atacaggagc tagagcggct
     3961 tttccaagac gacgaggtcg aaatccgtcc gcagcgcgcc gctgaaggct ccaaaaggaa
     4021 agggctcgcg ctcgccggtc cgcacgaacc ctcgacgctc gtaccaggcg atgagctctt
     4081 cgcgcaggct gatcaccgtc agccgcagga accgggcgct ccagagctcc cgcgccgccg
     4141 tctcgcagcg cgccacgact gccttgccaa ggccgccgcc ctgcgcgtcc gggtcgatgg
     4201 cgaacatgct gaaatacgcg ccgtggtgat agcgctggag gagggcgcaa ccgatgagct
     4261 ggcgatcccg ggacgcaacg acgaaccgcg agccgggatc tccgatgagc ttttcgactt
     4321 cggccaggga gctgcgcggg ccggagagga tgccgaattc attggtccag ctgcgctcgg
     4381 cggcaggacc gcgataggcg cgttcgacca gggcggcgac ggcggtcgca tcagcggcag
     4441 cggcgaagcc gaaaagcggg tcggaaacga tcatggcgcc gcgaaccgac catgtctgcc
     4501 gcccgaccgc aaggggtgct aggaagccgc ccatgcccac ctttatctcc gatggaatcg
     4561 acctcgccta cgacatttac ggcgaggggc ggccgatcct gttgatccac ggctttgcgt
     4621 cctccggggc catcaactgg ctcgacacgg gctgggtcag cgcactcaac gcggccggct
     4681 ggcaggccat caccatcgac aaccggggcc atggcgcctc gcgcaagctc tacgatccaa
     4741 aactctactt cgcgcacgac atggccgacg acgcggcgcg cctgctggac cggctggggc
     4801 atgaaaccct gccggtgatg ggctactcga tgggcgcgcg catctccgcc tacctggcgt
     4861 tgcgtcatcc ggagcgggtc aaatgtgccg tctggggagg catggggtac gatctggtga
     4921 cgggcccgga tacgtcggaa gagatcatcg cggcactcac cgccgagagc ctcgctgacg
     4981 tcaaaggggc catcgggcga cagttccgga ttttcgccga tcactcaaag tccgaccggg
     5041 cagcgctcgc cgcctgcatg ctctcgtcgc gcgagccgat ggccgccgcc gacctccacc
     5101 gcatcgtcca gccgacgctg gtcgccgtgg gcgagacgga cgacatggtc cgcgagccgc
     5161 agaggctggc cgatgccctg ccgcacggcg aggttttcat cgtccccaag cgcaatcaca
     5221 tgctggcaac cggcgacccc aggttcaagg cggcggccat ggcgttcctg gcgcgcaacg
     5281 gctgaccgcg ccggcggcaa aatgtgaacc attttccgcg ccggggcttg gttcgagagc
     5341 acgggatgcc ctatatcggc atcctgcgat ggaggcctcg atgagtgtgt cgctcaagtc
     5401 cgcggcgaat atcaagccgg tggaccccgt ctgggacgcg atccgcgcca atgcccaggc
     5461 gat
//
LOCUS       DATAZA010000378         2785 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_975688, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000378 DATAZA010000000
VERSION     DATAZA010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2785
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_975688"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            46..1005
                     /locus_tag="VHZ56_09560"
     CDS             46..1005
                     /locus_tag="VHZ56_09560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX4298258.1"
                     /translation="MTPDGSGAADPFAPLSTMTLPVSGGHALYVETIGNPAGTPAVFL
                     HGGPGSGCQPSHRMLFDPARFRAVLFDQRGAGRSTPLGDRSANTTQLQIADIEAVREA
                     LGIERWLVVGGSWGATLALAYAEALPDRVIGLALRATFLGTRAELDRAFGPQMGALYP
                     GLWQDFAGLLPPEERVDVPGNYWRRILDPDPAVHRPAALAWHDAERVLSVAHPQVTRL
                     DLAAVAAASGPMPRSPFMDAHYFSQDCFLTPGQLLSGARNLKGIPGIIVQGELDHLCP
                     PATSAALATVWPDARIEIVPDAGHSLGEPAIAAATKAAIAAFA"
     gene            1033..1677
                     /locus_tag="VHZ56_09565"
     CDS             1033..1677
                     /locus_tag="VHZ56_09565"
                     /inference="COORDINATES: protein motif:HMM:NF018178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HEX4298259.1"
                     /translation="MRLAAVVLITLLSVAPTLAEDAGFRPLTEWRAWRGTGIPPQWTI
                     KDGVIELQPGGGDLVSVETFHNFELSFEWRISAGGNSGVIYRSSEDFPLSYQTGAEYQ
                     ILDNTGHPDGKSPLTSAASNYGLYAPSADVTKPVGEWNTARIVVSGNHVEHWLNGTEV
                     LDYEIGSPDWKQRVAQSKFAAWPEYGTIGTGHIDLQDHGNPVAYRNLMIKVLPN"
     gene            1734..2171
                     /locus_tag="VHZ56_09570"
     CDS             1734..2171
                     /locus_tag="VHZ56_09570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298260.1"
                     /translation="MKLTILFAGAALALAATPVAALSLTSSQVGDIYCAARLSSDMAP
                     VLAILTPELAALVAQHLPAGADAATVIPWQSSADYANSCMPVGASGTADAPEIIIAFG
                     YDDPSKAQYADKLVMRFVDKRLRIDDIAYSTGGTLREKLGKAQ"
     gene            complement(2182..2382)
                     /locus_tag="VHZ56_09575"
     CDS             complement(2182..2382)
                     /locus_tag="VHZ56_09575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298261.1"
                     /translation="MEAEGWPALPHERFKGESNDAYRRRVFEIGQMQDGFRMGRYRGD
                     MAEHMERRLIRLQEQPLEALSA"
     gene            complement(2478..>2785)
                     /locus_tag="VHZ56_09580"
     CDS             complement(2478..>2785)
                     /locus_tag="VHZ56_09580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020188211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX4298262.1"
                     /translation="IGGLSLDPQSHRVTKDGVPITLTVREFELLHYLMSNPDRVVSRE
                     RLLNSVWDYGYDPGTKIVDVYVRYLRQKIDGPEGVPSLIQTVRGIGYMMSSEHAHAA"
BASE COUNT          445 a         1014 c          872 g          454 t
ORIGIN      
        1 tctatcgcaa cttctccggc ggcacgctcg agcccgaagg cagctatgac gcctgacggg
       61 tccggcgccg ccgacccctt cgcgccgctg agcaccatga cgctgcccgt cagtggcggg
      121 catgcgctct atgtcgagac catcggcaat cccgccggca cgcctgcggt gttcctgcat
      181 ggcggaccgg gcagtggctg ccagccctcc caccgcatgc tgttcgatcc tgcccgcttc
      241 cgcgccgtgt tgttcgacca gcgtggcgcc ggccgcagca cgccgctcgg cgaccgcagc
      301 gccaacacca cgcagctgca gatcgccgac atcgaagcgg tgcgcgaggc gctcggcatc
      361 gagcggtggc tggtggtcgg cggctcatgg ggcgcgacac tggcgctcgc ttatgccgag
      421 gccctgccgg accgcgtcat cggcctcgcg ctgcgcgcga ccttcctcgg cacccgcgcc
      481 gagctcgacc gcgcttttgg cccgcagatg ggggccctct atcccggcct gtggcaagat
      541 ttcgccggcc tgctgccgcc ggaggagcgt gtcgacgtgc ccggcaatta ctggcgccgc
      601 atcctcgacc ccgatcccgc ggtgcaccgg ccggcggcgc tcgcctggca cgacgccgag
      661 cgcgtgctgt ccgtggcgca tccgcaggtg acccgcctcg acctcgccgc cgtggcggcc
      721 gccagtgggc cgatgccgcg cagccccttc atggacgcgc attatttctc gcaggactgc
      781 ttcctcacgc ccgggcagtt gctgagcggc gcccgcaacc tcaagggcat ccccgggatc
      841 atcgtacagg gcgagctcga ccatctctgc ccgcctgcca cctccgcggc gcttgccacc
      901 gtttggcccg atgcgcggat cgagatcgta cctgacgccg gccactcctt gggcgagccc
      961 gccatcgccg ccgcaaccaa ggctgcgatt gccgcgttcg cctgagactc cggcttccgg
     1021 gaggacaagc ccatgcgcct tgccgccgtg gttctgatca ccctgctttc cgtggcgccg
     1081 acgctggccg aggacgcggg cttccggccg ctgaccgaat ggcgcgcctg gcgcggcacg
     1141 ggcattccgc cacaatggac gatcaaggac ggcgtgatcg agctccagcc gggcgggggc
     1201 gacctcgtca gcgtcgagac cttccacaat ttcgagctca gcttcgagtg gcgcatttcc
     1261 gccggcggca attccggcgt gatctatcgc agcagcgagg atttcccgct gtcctaccag
     1321 accggcgccg agtaccagat cctcgacaat accggccacc ccgacggcaa gtcgccgctg
     1381 acctccgccg ccagcaatta tgggctctac gcgccttccg ccgatgtcac caaaccggtg
     1441 ggcgagtgga acaccgcgcg catcgtggtc agcggcaacc acgtcgagca ttggctcaac
     1501 ggcaccgagg tgctcgacta cgagatcggc tcgcccgact ggaaacagcg cgtggcgcag
     1561 agcaagttcg ccgcctggcc cgaatacggc accatcggca ccggccacat cgacctgcag
     1621 gaccacggca accctgtcgc ctaccgcaat ctcatgatca aagtgctgcc caattgagcc
     1681 ggctgatgcg cgatataggt gcggtccgcg ccggagcgtg gcatgagagc ggcatgaagc
     1741 tgaccatcct gttcgccggc gccgcattgg cgctcgccgc cacgcccgtc gccgcgctgt
     1801 cgctgacctc gagccaggtg ggcgacatct actgcgcggc ccggctcagc agcgacatgg
     1861 cgccggtgct ggcaatcctc acgccggagc tggcggcgct cgtcgcccag catctgccgg
     1921 caggtgccga cgccgccacc gtgattccct ggcaaagcag cgccgactac gccaacagct
     1981 gcatgccggt gggcgccagt ggcaccgccg atgcgcccga aatcatcatc gccttcggct
     2041 atgacgaccc cagcaaggcg caatatgccg acaagctggt gatgcggttc gtcgacaagc
     2101 gcctgcgcat cgacgacatc gcctactcga ccggcggcac gctgcgcgaa aaactcggca
     2161 aggctcagta aagggcagcc ctcaggccga aagcgcctcg agcggctgct cctgcaggcg
     2221 gatcaggcgg cgctccatat gctcggccat gtcgccgcgg tatcgcccca tgcggaagcc
     2281 atcctgcatc tgcccgatct cgaacacccg gcgccggtag gcatcgttgc tctcgccttt
     2341 gaaccgctcg tgcggcagtg ccggccagcc ttcagcttcc attttcgtct ccatcgaacc
     2401 cgttgactcg atggagccag ctaaaaccat cgagattaga tggcgttgaa ggctcgatta
     2461 aaagttggag agagccgcta ggcggcgtgc gcgtgttccg acgacatcat gtagccgatg
     2521 ccgcgcacgg tctggatcag cgacggcacg ccctccggcc cgtcgatctt ctggcgcaga
     2581 tagcgcacat agacgtcgac gatcttggtg cccgggtcgt agccatagtc ccacacgctg
     2641 ttgagcagcc gctcgcggct caccacccga tccggattgc tcatcaggta gtgcagcagc
     2701 tcgaactcgc gcaccgtgag cgtgatcggc accccgtcct tggtgacgcg gtgcgattgc
     2761 ggatcgaggc tcagcccgcc gatcc
//
LOCUS       DATAZA010000379         4573 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3530789, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000379 DATAZA010000000
VERSION     DATAZA010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4573
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3530789"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..751
                     /gene="rsmA"
                     /locus_tag="VHZ56_09585"
     CDS             <1..751
                     /gene="rsmA"
                     /locus_tag="VHZ56_09585"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEX4298263.1"
                     /translation="PLAGHTVIEVGPGPGGLTRALLSEGAGRVIAIERDERALPALAE
                     IAAAYPGRLEVIAGDALDMDYRALASGPTRIVANLPYNIGTELLVGWLTLEPWPAFFA
                     SLTLMFQREVAERIVARPGEDAYGRLGVLAGWRTEARIAFNVDRNAFTPPPSVTSTVV
                     HLVPGAVDPDLRVRDVEAVTKAAFGQRRKMVRQSLKATGVPVEALLAAAGLRGDERAE
                     ELPVEAFLAMARVLRASRSGSADPSRTSPSG"
     gene            complement(696..1334)
                     /gene="gmk"
                     /locus_tag="VHZ56_09590"
     CDS             complement(696..1334)
                     /gene="gmk"
                     /locus_tag="VHZ56_09590"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEX4298264.1"
                     /translation="MDFARRGVMMVLASPSGAGKSSISRAIFEQDPNISLSVSVTTRA
                     RRHDEIDGIHYHFIDIPAYRRMLADGELLEHAEVHGNLYGTPRAHVEEKLARGRDILF
                     DIDWQGTLQLLKKARADMVTIFILPPSIRELRKRLERRAQDSKETIETRLKNARIEME
                     HWKEYDYVLVNEDLDQSCARVRSILAAARQKRDRFTQMDSFVTDLQNQIDSL"
     gene            complement(1337..2230)
                     /locus_tag="VHZ56_09595"
     CDS             complement(1337..2230)
                     /locus_tag="VHZ56_09595"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HEX4298265.1"
                     /translation="MAKSLQSMTGYARAAGGVPGIAFSVEIRSVNARGLDIRMRATPG
                     YDALEAEIRRRIGKALSRGSLSVSLNVEREGEGGRVVVNRQALDAVLAAIKEIGALTN
                     SPRPTPDGILGLKGVLEQHDAPLDPGTEDALHGAILAGVDAALADLEMARRAEGRHVG
                     DILAAQVDEIARLRDSAAAHPGRSRDVVLARLKEQIAELMASAAGFSEDRLAQEALLL
                     ATKADIREELDRLAAHVAAARQLLADGGPAGRRLDFLSQEFNREANTLCSKSNAVELT
                     AIGLDLKAVIDQFREQVQNLE"
     gene            complement(2249..3394)
                     /gene="mltG"
                     /locus_tag="VHZ56_09600"
     CDS             complement(2249..3394)
                     /gene="mltG"
                     /locus_tag="VHZ56_09600"
                     /inference="COORDINATES: protein motif:HMM:NF014656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEX4298266.1"
                     /translation="MRGNMAASEKKPRRRRRQGLALTLLNGLLTLIVLAILGLGAATY
                     YGIEHFYAPGPKDTETAFLVEKGSNLNTISTRLAEQGFMDDGLFDSVVFKSGIQLLGA
                     RSARIIPGQYTMPAHASMADLLTTITESKPQEFFVNVVPGETSWQVAANVNDPAQSLS
                     GDPVSPPPEGTLLAARQDFFPGDTRQSVLDRMSKSMADEVAQVWATHDPSIDAVVKSP
                     ADLVTLASLVEKETGVDTERPEVASVFINRLKKHMRLQTDPSVIYGITQGKAKLDRGL
                     TTKDLDAKTPYNTYQIDGLPPGPIANPGLDALQAVAHPADTNYLYFVAKTADPADGHY
                     FSPTYAQHRKNVALYQQAVKDQAADEAEQAREQLEQQQASEAGDTTQ"
     gene            complement(3488..>4573)
                     /gene="fabF"
                     /locus_tag="VHZ56_09605"
     CDS             complement(3488..>4573)
                     /gene="fabF"
                     /locus_tag="VHZ56_09605"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020095202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEX4298267.1"
                     /translation="GKFDADDWMDPKEQRKVDPFIVFGMAAAAMAIEDAGAIPRTQDE
                     QERTGVLIGSGIGGVGTIYDASVTLHEKGPRRVSPFFVPGRIINMVSGNVSIRFGLKG
                     PNHSVVTACSTGAHAIGDSWRIIAMGDADVMLAGGAESPVNRLSVAGFAACRALSTNF
                     NDRPTEASRPYDRDRDGFVMGEGAAVVVLEEYERAKARGAKIYGEVIGYGMSGDAYHI
                     TAPSPDGDGGYRCMQMAVRRAGISPADIDYINAHGTSTPLGDEIELGAVTRLLGDAAD
                     KAAMSSTKSSIGHLLGAAGSIEAIFSLLAMRDNIAPPTLNLDNPSVDTPINLVPKVPV
                     KKQIDVALSNSFGFGGTNASLIFRKVA"
BASE COUNT          675 a         1465 c         1662 g          771 t
ORIGIN      
        1 ccccctcgcc ggccacaccg tgatcgaagt cggccccggg ccgggcgggc tgacgcgggc
       61 gctactgagc gagggcgccg ggcgggtgat cgcgatcgag cgcgacgagc gggcgctgcc
      121 ggcgctggcc gagatcgccg cagcctatcc cggccggctc gaggtgatcg ccggcgacgc
      181 gctcgacatg gactaccggg ccctcgccag cggcccgacg cggatcgtcg ccaacctgcc
      241 ctacaacatc ggcaccgagc tgctggtcgg ctggctgacg ctcgagccgt ggccggcgtt
      301 cttcgcgagc ctgacgctga tgttccagcg cgaggtggcg gaacgcatcg tcgcgaggcc
      361 cggcgaggat gcctatggcc ggctgggcgt gctggccggg tggcggacgg aggcgcgcat
      421 cgcgttcaac gtcgatcgca acgcgttcac gccgccgccg tcggtcacct cgacggtggt
      481 gcatctcgtc cccggggcgg tcgaccccga cctgcgggtg cgcgacgtcg aggcggtgac
      541 gaaggcggcg ttcgggcagc gccgcaagat ggtgcggcag agcctcaagg cgacgggggt
      601 gccggtggaa gcattgctcg ccgccgccgg gctcaggggc gacgagcgcg ccgaggaatt
      661 gccggtcgag gcgttcctcg ccatggcgcg ggtgctcaga gcgagtcgat ctggttctgc
      721 agatccgtca cgaacgagtc catctgggtg aagcggtcgc gtttctggcg ggcggcggcg
      781 aggatggagc ggacgcgggc gcagctctgg tcgaggtctt cgttgaccag aacgtagtcg
      841 tactctttcc agtgctccat ctcgatgcgg gcattcttga gccgcgtctc gatggtctcc
      901 ttgctgtcct gggcacggcg ctcgaggcgc ttgcgcaact cgcggatcga aggcggcagg
      961 atgaagatcg tcaccatgtc agcccgcgcc ttcttcagca gctgcaaggt gccctgccag
     1021 tcgatgtcga acaggatgtc gcggcctcgg gcgagctttt cttcgacgtg ggcgcgcggc
     1081 gtgccataga gattgccgtg cacctccgcg tgctcgagca gttcgccatc ggcaagcatg
     1141 cgccggtagg ccgggatgtc gatgaagtga tagtggatgc cgtcgatctc gtcgtgccgg
     1201 cgagcccgcg tggtcaccga caccgacagc gaaatgttgg ggtcctgctc gaagatggcg
     1261 cgcgagatcg acgacttgcc cgcccccgag ggcgaggcca gcaccatcat cacgccgcgg
     1321 cgcgcgaagt ccatcgtcac tccaggttct gcacctgctc gcggaactgg tcgatgacgg
     1381 ccttgaggtc gaggccgatc gccgtcagct ccacggcgtt ggatttggag cacagggtat
     1441 tcgcttcccg gttaaattcc tgtgagagga aatccagcct gcggccggcg gggccgccgt
     1501 cggccagcag ctgccgggca gcggcgacgt gggcggcaag ccggtcgagc tcctcgcgga
     1561 tgtcggcctt ggtggccagc agcagcgcct cctgggcgag gcgatcctcg gaaaagccgg
     1621 cggccgaggc catgagctcg gcgatctgct ccttgagccg cgcgaggacg acgtcacggc
     1681 tgcggccggg atgcgcagcc gcactgtcgc gcaggcgcgc gatctcgtcg acctgggcgg
     1741 caaggatatc gccgacgtgg cggccctcgg cccgccgcgc catctcgagg tcggcgagcg
     1801 cggcatcgac gccggcgagg atggcgccgt gcagcgcgtc ctcggtgccc ggatcgagcg
     1861 gcgcatcgtg ctgctcgagg acgcccttga ggccgaggat gccgtccggg gtcggtcgcg
     1921 gcgagttggt cagcgcgccg atctccttga tcgccgcgag cacggcgtcg agcgcctggc
     1981 ggttgacgac gacgcggccg ccctcgccct cgcgctcgac gttgaggctc accgacagcg
     2041 agccgcgcga cagggccttg ccgatgcggc ggcgaatctc ggcctccagt gcgtcatagc
     2101 ccggagtggc gcgcatgcgg atgtcgagcc cgcgcgcatt gacggagcgg atttcgacgg
     2161 aaaaggcgat gccgggaacg ccgccggcgg cgcgtgcata gccggtcatt gactgcaggg
     2221 acttggccat agccgggcga tacacccttt attgggtcgt gtctccggcc tcgctcgcct
     2281 gctgctgctc gagctgttcg cgcgcctgct cggcctcgtc ggccgcctgg tccttcaccg
     2341 cctgctggta gagagcgacg ttcttgcggt gctgcgcgta ggtcggggag aaataatgcc
     2401 cgtcggccgg gtcggcggtc tttgcgacga aatacaggta gttggtgtcg gccggatgcg
     2461 ccaccgcctg cagggcatcg agcccggggt tggcgatcgg gcccggcggc aggccgtcga
     2521 tctggtaggt gttgtacggc gtcttggcgt cgaggtcctt ggtggtgagg ccacggtcga
     2581 gcttggcctt gccctgggtg atgccgtaga tcaccgacgg gtcggtctgc agccgcatgt
     2641 gcttcttgag acggttgatg aagaccgagg cgacctcggg ccgctccgtg tcgactccgg
     2701 tttccttctc gaccagcgag gccagcgtca caaggtcggc gggggatttc accacggcgt
     2761 cgatcgaggg atcgtgcgtc gcccacacct gcgcaacttc atcggccatg ctcttgctca
     2821 tgcggtcgag caccgattgc cgcgtgtcgc cgggaaagaa atcctggcgg gcggcgagca
     2881 gcgtgccctc cggcggcggc gagaccggat cgccgctcag gctctgggcg gggtcgttga
     2941 cgttggccgc gacctgccac gaggtctcgc cgggcacgac gttgacgaag aattcctgcg
     3001 gcttgctctc ggtaatggtg gtcagcaggt ccgccatcga ggcatgggcg ggcatggtgt
     3061 actggccggg aatgatcctg gcgctgcggg cgccgagcag ctggatgccg gacttgaaca
     3121 ccacgctgtc gaacagcccg tcatccatga agccctgctc ggcgaggcgc gtggaaatgg
     3181 tgttgaggtt gctgcccttt tcgacgagga aggcggtctc ggtgtccttc gggccgggcg
     3241 catagaagtg ctcgatgccg tagtaggtgg ccgcgccgag cccgaggatc gccagcacga
     3301 tcagtgtcag caggccgttg agcagggtca gcgccaggcc ctggcgacgc cgacgccgcg
     3361 gtttcttctc gctcgccgcc atgttccccc tcacccgccg gtccgtctcg ccagaccgcc
     3421 atttgcctca acgaagcggg caaaacaagg acgcgcccgg caccgaatcc tgttgaaaac
     3481 cggccagcta ggcgaccttg cggaagatca gcgaggcgtt ggtgccgcca aagccgaacg
     3541 aattcgaaag cgccacgtcg atctgctttt tcaccggcac cttcggcacc aggttgatcg
     3601 gcgtgtcgac ggaggggttg tcgaggttga gggtcggcgg ggcgatgttg tcgcgcatgg
     3661 cgagcagcga gaagatcgcc tcgatcgagc ccgccgcgcc aagcaggtgg ccgatggagg
     3721 atttggtgga cgacatcgct gccttgtccg cggcatcgcc cagcaggcgg gtcaccgcac
     3781 ccagttcgat ttcgtcgccg agcggcgtcg aggtgccgtg ggcgttgata tagtcgatgt
     3841 cggcgggcga gatgccggcg cgcctgacgg ccatctgcat gcagcggtag ccgccgtcgc
     3901 cgtccggcga cggagcggtg atgtggtagg cgtcacccga catgccgtag ccgatgacct
     3961 cgccgtagat cttggcgccg cgcgccttgg cccgctcgta ttcctcgagc acgacgaccg
     4021 cggcgccctc ccccatgacg aagccgtcgc gatccctgtc gtaggggcgg gaggcttcgg
     4081 tgggccggtc gttgaaattg gtggacaggg cccggcaggc ggcaaagccg gcgacggaaa
     4141 gacgattgac cggagattcg gcgccgccgg ccagcatcac gtcggcatcg cccatggcga
     4201 tgatgcgcca gctgtcgccg atcgcatggg cgccggtcga gcaggccgtc accaccgagt
     4261 ggttggggcc cttgaggccg aagcggatcg agacgttgcc cgagaccatg ttgatgatgc
     4321 ggccgggcac gaagaacggg ctgacgcggc gcggaccctt ctcatgcagg gtcaccgagg
     4381 cgtcgtaaat ggtgccgacg ccgccgatgc cggagccgat gaggacgccg gtgcgctcct
     4441 gctcatcctg ggtcctgggg atggcgcccg cgtcctcgat cgccatggcc gccgccgcca
     4501 tgccgaagac gatgaacgga tcgaccttgc gctgctcctt ggggtccatc cagtcgtcgg
     4561 catcgaactt gcc
//
LOCUS       DATAZA010000380         3249 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2949245, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000380 DATAZA010000000
VERSION     DATAZA010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3249
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2949245"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1901)
                     /locus_tag="VHZ56_09610"
     CDS             complement(<1..1901)
                     /locus_tag="VHZ56_09610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor region1.1
                     domain-containing protein"
                     /protein_id="HEX4298268.1"
                     /translation="MASKAPAKAKKAAAKTAAKTAPKAASTTAKKAVPKAKAKAKAPV
                     KAAARAVSKPAAKVAQKAPARPVAKAVAKPAAKTAPKPAAKIEAKASKAPAPKPVVKI
                     EPKAAAKPVAKAAVKADTKPVITDPKIEPKAAAPKAQPKTVAKAPSKSAKDEKPAGQA
                     DKPEASTDAPDSPLLDLSDAAVKKLIKTAKKRGYVTYEEVNAVLPSDQVSPDQIEDIM
                     SMFSEMGINVIDEDEVEEPEPETPEEESTELAERTGTAVASKSNAREGSDRTDDPVRM
                     YLREMGSVELLSREGEIAIAKRIEAGRETMIEGLCESPLTFQAIIIWRDQLGAAEILL
                     RDIIDLEATYAGPDAKQAAPVVPAEAAQPLAAAPSPVKSEPAKPAPRRAGSGNEDDDY
                     VPEEPQAPQDPVDDDDDDFENSLSLSAMEAELKPQVVETFDRIAEAYGKMRKLQDKHA
                     ADRSKPVTGAETKKVDTFRSSVIADVKSLSLNASRIESLVEQLYDINKRLVRLEGRLL
                     RLAESYGIKREDFLEAYYGHELEEEWHKAVAKRGKSWTEFTKREGDTVVDIRGEIHTL
                     ATEAGLDVTEYRRIVHKVQKGEREAAIAKKEMVEANLRLVISIAKKYTNRGLQFLDLI
                     QEGNIGLMKA"
     gene            complement(2065..>3249)
                     /locus_tag="VHZ56_09615"
     CDS             complement(2065..>3249)
                     /locus_tag="VHZ56_09615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEX4298269.1"
                     /translation="GMDARKAARDGKPVIVVEGYLDVISAVMAGFEGTVAPLGTALTE
                     DHVQLLWRMNDAPILCFDGDVAGLRAAERAAGLVMPLLQPGKTVRIATLPEGLDPDDI
                     IRQQGRTAFADVIERARALSDVVWSMETGGIVPETPEARAAVEARLRARAGEIADQSV
                     RRHYMQAFDEKLAAFFQPVRPARYEQQRGGSRRNSGRPVYGQARGTPRLVVSDMLRNS
                     RMLRPGSAGEPSPREAVILVSLINHPALAESRLEPLAGLEFGSPAGRKLSAALIELIM
                     ADHDVTADDLRATLGARGFGPQIEKMEGLLRAQGVWQVLADAAELDAETGLRHALALH
                     YKSVELNKALKAAENALDVDWTEDSFRVLQDIKNQITTVDGTEALIEGFGSLSGRAAR
                     SF"
BASE COUNT          421 a         1143 c         1027 g          658 t
ORIGIN      
        1 gccttcatca gcccgatgtt gccttcctgg atcaggtcga ggaactgcag gccgcgattg
       61 gtgtacttct tggcgatcga gatcacgagg cggaggttgg cctcgaccat ctccttcttg
      121 gcgatcgctg cttcgcgctc gcccttctgc accttgtgca cgatccggcg gtactcggtg
      181 acgtcgagcc cggcttccgt cgccagcgta tgaatctcgc cgcggatgtc gacgacggtg
      241 tcgccctcgc gcttggtgaa ctcggtccag ctcttgccgc gcttggcgac cgccttgtgc
      301 cactcctcct cgagctcatg gccataatag gcctcgagga aatcctcgcg cttgatgcca
      361 tagctctccg ccagccgcag cagccggccc tccagccgca ccagccgctt gttgatgtcg
      421 tagagctgct cgaccaggct ctcgatgcgc gaggcattga ggctgagcga tttcacatcg
      481 gcgatcaccg acgagcggaa ggtgtcgacc ttcttggtct cggcgccggt gaccggcttc
      541 gagcggtcgg cggcgtgctt gtcctgcagc ttgcgcatct tgccgtaggc ttcggcgatg
      601 cggtcgaagg tctcgaccac ctgcggcttc agctccgcct ccatcgcgct cagcgacagc
      661 gaattctcga aatcgtcgtc gtcatcgtcg acgggatcct gcggcgcctg cggctcctcg
      721 ggcacgtaat cgtcgtcctc gttacccgac ccggcgcggc gcggcgccgg cttggccggt
      781 tccgacttca ccggggacgg agcagcggcg agcggctgcg ccgcctcggc cggcaccacc
      841 ggcgcggcct gcttggcatc ggggccggcg taggtggcct cgaggtcgat gatgtcgcgc
      901 agcaggattt ccgccgctcc gagctggtcg cgccagatga tgatggcctg gaaggtcagc
      961 gggctctcgc acagcccttc gatcatggtt tcgcggccgg cctcgatgcg cttggcgatg
     1021 gcgatctcgc cctcgcggct cagcagttcc accgaaccca tctcgcgcag gtacatccgc
     1081 accggatcgt cggtacggtc gctgccttcg cgggcgttcg acttgctggc gaccgccgtt
     1141 cccgtgcgct ccgcgagctc ggtcgattcc tcttcgggcg tctcgggctc gggctcctcg
     1201 acctcgtcct cgtcgatgac gttgatgccc atctccgaga acatcgacat gatgtcctcg
     1261 atctggtccg gcgacacctg gtcgctcggc agcaccgcgt tcacctcttc ataggtgaca
     1321 tagccacgct tcttggccgt cttgatgagc ttcttgaccg ctgcatcgga caggtcgagc
     1381 agcgggctgt cgggtgcatc cgtgctggct tcgggcttgt ccgcctgccc tgcgggcttt
     1441 tcgtccttgg cagatttcga gggagctttg gcaacagtct tgggctgagc cttcggcgcc
     1501 gcggccttgg gctcgatctt cgggtcggta atcactggct tggtgtctgc ctttactgcg
     1561 gccttggcga cgggtttcgc ggcggccttt ggttcgatct tcactacagg cttgggggcc
     1621 ggcgctttcg acgccttcgc ctcgatcttg gcggccggct tgggagccgt ctttgccgca
     1681 ggcttggcga ccgccttcgc caccggccgc gccggcgcct tctgggcgac cttggcggcc
     1741 ggcttggaca ccgccctggc ggcggccttc accggcgcct tcgcttttgc cttggccttg
     1801 ggcaccgctt tcttggccgt cgtgctggcg gctttgggag ccgtcttcgc tgccgtcttc
     1861 gctgcggcct tcttggcctt cgcgggtgcc ttggatgcca tctggctttt gctccgtgac
     1921 ccggccgggt ccgttcggtt caaatggtgg cagtcgatag cgcagcaagg gtccgacgcg
     1981 cttctacgcg ccgatgattc gtttccagaa ggggcttatg taactgattc gcccataagc
     2041 aaaatcgcgc gttcgcgaac ttgctcagaa gctgcgggcc gcgcgtccgg ataacgaacc
     2101 aaatccctcg atcaacgcct ccgtgccatc gacggtcgtg atctggttct tgatgtcttg
     2161 cagcaccctg aacgagtcct cggtccaatc gacgtcgagg gcattttccg ctgctttcaa
     2221 ggccttattt agctcaaccg acttgtaatg caaggccagc gcatgccgga gaccggtttc
     2281 cgcgtcgagt tcggcggcat cggccagcac ctgccagacc ccctgcgccc gcaacaatcc
     2341 ctccattttc tcgatctgcg gcccaaagcc gcgcgcgccg agcgtcgccc gcaggtcgtc
     2401 cgccgtcacg tcgtggtcgg ccatgatgag ctcgatcagc gccgcagaca gcttgcggcc
     2461 cgccggcgag ccgaattcca gcccggcgag cggttccagc cggctttcgg ccagcgccgg
     2521 atgattgatc aggctgacga ggatgaccgc ctcgcgcggg ctgggctcgc cagcgctgcc
     2581 gggccgcagc atgcgggaat tgcgcagcat gtcggaaacc accagccgcg gcgtgccccg
     2641 cgcctgcccg tagaccggcc gccccgagtt ccgccgcgat ccgcctcgct gctgctcata
     2701 tcgcgccggc cgcaccggct ggaagaacgc cgcgagcttt tcgtcgaacg cctgcatgta
     2761 gtgccggcgg accgactggt cggcgatttc ccccgcccgc gcccggagcc gtgcctcgac
     2821 cgccgcccgc gcctccggcg tctccggcac gatgccgccg gtttccatgc tccacaccac
     2881 gtccgaaagc gcccgcgccc gctcgatcac gtcggcgaag gcggtgcggc cctgctgccg
     2941 gatgatgtcg tccgggtcga gcccctcggg cagcgtcgcg atcctgacgg tcttgcccgg
     3001 ctgcagcagc ggcatcacca gcccggcagc gcgttcggcg gcgcggaggc cggcgacgtc
     3061 gccgtcaaag cacaggatcg gcgcgtcgtt catccgccac agcagttgca cgtggtcctc
     3121 ggtgagcgcc gttccgagcg gcgccacggt cccctcgaac cccgccatca ccgccgaaat
     3181 cacgtcgaga tagccctcga ccacgatcac cggcttgccg tcgcgggccg ccttgcgcgc
     3241 gtccatgcc
//
LOCUS       DATAZA010000381         4110 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3298483, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000381 DATAZA010000000
VERSION     DATAZA010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4110
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3298483"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(223..1164)
                     /locus_tag="VHZ56_09620"
     CDS             complement(223..1164)
                     /locus_tag="VHZ56_09620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017964330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding protein"
                     /protein_id="HEX4298270.1"
                     /translation="MKFIVSGAAILAAALMFASGAMAQDKPVLAFVPNGTTDFWKAAE
                     AGMKKAQAEMPDYTLELKYPDAATVASQQSLMDNLATNGVKAIIVSAVDPKATDVLDK
                     IAGETALFTTDSDAPQSKRIAYVGSSNVLAGGQAAEIAKKAMPNGGKCMGFVGLLDAA
                     NYKERAQGFTDGIKGTQITLVDTKGDNIDMARAKANVSDVLAANPDINCMVGFYSYNT
                     PQIYQALKDAGKLGQITVVGFDDDPVTLGGVKDGSIAGTVVQQPFEWAYQGFKLMAAV
                     LKGDKSGVPANGQVIVPTKILYQADIDAYAAGLKAMQ"
     gene            1607..2623
                     /locus_tag="VHZ56_09625"
     CDS             1607..2623
                     /locus_tag="VHZ56_09625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008872837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX4298271.1"
                     /translation="MTDVAREAGCSQATVSFVLNRTEGVKISQQTRERVLGAARTLGY
                     SAASLAPVEPARRIGTDGLIGFTVDQLSTSPEAVVAIEGARQAAWDAGNIILVAQTMS
                     DPVMEPRTIEALLSHGVSGFICMTIFTREIVLPELLREIKVPLVLLNCYSADHAFPAV
                     VPSEIAGGQSATQHLIEQGHRRIGTILGESWMEAAQDRLEGYRRALATADIPFDASLV
                     LEGDWSASAGYHGTRKLLALKEPPTAIFCQNDRTAIGCYEALKEAGLRIPEDISVIGY
                     DDEEISRHLHPRLSTAILPHRAMGQWAIERLEEPVDRNRRRHPITKLECLLVPRDSVA
                     PPSR"
     gene            2721..3725
                     /locus_tag="VHZ56_09630"
     CDS             2721..3725
                     /locus_tag="VHZ56_09630"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX4298272.1"
                     /translation="MPSTLAVIVPCFNEQESIPFAVETLLGELDRMVAAGLVADSSFL
                     FFVDDGSRDATWAVLTAARGRDARVRGLRLSRNFGHQPALVAGIAAVCDEADISISID
                     ADLQQEPAAMGRFVEAHRDGADIVLGVRRDRDSDRPGKKITARLFYGVMRMMGVDVVP
                     DHADYRLLDRRAMRALLSFPETNLFVRGICSLLGFDTRQVTFTVKERQFGKTKYSARR
                     MLRFAIYAITSFSVVPLRAISILGLLCFLVSLGMVGFILWSSLFVGDTVPGWASTALP
                     IYFLAGIQLLSLGVVGEYVGKIYSTVQHRPRWIEWQRLDDAPLDPRHTAVDRTSGPRP
                     "
     gene            3722..>4110
                     /locus_tag="VHZ56_09635"
     CDS             3722..>4110
                     /locus_tag="VHZ56_09635"
                     /inference="COORDINATES: protein motif:HMM:NF039722.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6311 domain-containing protein"
                     /protein_id="HEX4298273.1"
                     /translation="MSEADPVSGDSRGDLALAAFVGGAAFLAIVGPRVLDVTNMLWLT
                     TMKDTFTHYLGWEFFRRAASGWPPGLDPDYGMQFSSSIIFSDSVPLLALPLKLLSPLL
                     PEVFQYTGWWTLACFVLQAWFAVRLVGL"
BASE COUNT          653 a         1329 c         1408 g          720 t
ORIGIN      
        1 acgctcatcg aaaagccttg cagggcgagc acgcccggat aggccttgcg gacgcccgaa
       61 aggatcagga agggcgcggc cgaagccggc gcggtagaag cagcagcgct ggtcatctga
      121 gcccaaggtt aggcgcggca cgatcggacg gcaagctcgg aagcctgccg cccgtcgggg
      181 agaaactgcc ccggcccgcg gaacgggccg ggacggtcaa agctactgca ttgccttcag
      241 gccagccgca taggcgtcga tgtcggcctg gtagaggatc ttggtcggca cgatcacctg
      301 accattggcc gggacgcccg acttgtcgcc cttgagcacg gctgccatca gcttgaagcc
      361 ctgataggcc cactcgaacg gctgctgcac gacggtgccg gcgatcgagc cgtccttgac
      421 gccaccgagc gtgaccggat catcatcgaa gccgacgacg gtgatctggc cgagcttgcc
      481 ggcatctttc agcgcctggt aaatctgcgg cgtgttgtag gagtagaagc cgaccatgca
      541 gttgatgtcg gggttggccg ccagcacgtc cgacacgttc gccttggcgc gagccatgtc
      601 gatgttgtcg cccttggtgt cgacgagggt gatctgcgtg cccttgatgc catcggtgaa
      661 gccctgggcg cgctccttgt agttggccgc atcgagcagg ccgacgaagc ccatgcactt
      721 gccgccgttc ggcatcgcct tcttggcgat ctcggccgcc tggccgccgg ccagaacatt
      781 cgaggagccg acataggcga tgcgcttgga ctgcggtgcg tcggagtcgg tggtgaacag
      841 cgcagtctca ccggcgatct tgtcgagcac gtccgtcgcc ttgggatcga cggccgaaac
      901 gatgatagcc ttgacgccgt tggtggccag attgtccatc agggactgct ggctcgcgac
      961 ggtcgcggcg tcgggatatt tgagctcgag ggtgtagtcc ggcatctcgg cctgggcctt
     1021 cttcatgccg gcctcggcgg ccttccagaa gtcggtggtg ccattgggaa caaatgccag
     1081 caccggcttg tcctgcgcca tcgcgccgga cgcgaacatg agggcggccg ccagaatggc
     1141 ggcacccgaa acgataaact tcatagcgat atcctcccgt tgcccctgct cctcgcaggg
     1201 tcgtcagacg ccgacccgta acacgctggt gccttgggca cgcttttgcg gatcgacgcc
     1261 aagctctgat taagtcatac ttttgatcct gtaaacgcac ttcgcgcatt caccgaccgg
     1321 tcggaagcgg caccaggcga tcgcccgagc gtcgcttcac ccggcgagtt atccatatta
     1381 gtaatagtgc gtcaagcgcg gcgacgttct tccgccccgt ctgctgccga tgtgcgagtt
     1441 tgccggcgca gcgttgacgt cgacagctaa tgtttattac ttatgcgtcg gcgcggccgg
     1501 tgcggcttac cgggcgggcg gttcgagggg gacaagcaaa atcgacgtga agcgtgcgcc
     1561 agggaaggcc ggaggtcgcg gggcgccgcc gcgccggcga gtgacgatga ccgacgtggc
     1621 gcgggaggcc ggctgttcgc aggcgacggt gtcgttcgtc ctcaaccgca cggaaggcgt
     1681 caagatttcg cagcagacgc gcgagcgcgt gctcggggcg gcgcggacgc tgggctacag
     1741 cgccgccagc ctggcaccgg tcgagccggc gcggcggatc ggtaccgacg ggctgatcgg
     1801 atttaccgtc gaccagctgt cgaccagccc tgaagcggtg gtcgccatcg agggcgcgcg
     1861 gcaagccgcc tgggacgctg gaaacatcat tctagtggcg cagacgatgt cggacccggt
     1921 gatggagccg cgcaccatcg aggcgctgtt gtcgcacggc gtttccggct tcatctgcat
     1981 gaccatcttc acccgcgaaa tcgtgctgcc cgagctgctg cgcgagatca aggtgccgct
     2041 ggtgctgctc aactgctaca gcgccgacca tgcctttccg gcggtggtac cgagcgagat
     2101 cgccggcggc cagtcggcga cgcagcacct gatcgaacag ggccaccgcc gtatcggcac
     2161 gatcctgggg gaaagctgga tggaggcggc gcaggaccgg ctcgagggct accggcgggc
     2221 cctggcgacg gccgacattc cgttcgatgc ttcgctcgtg ctcgagggcg actggtcggc
     2281 aagcgccgga taccacggca cgcggaagct gctggcgctg aaggagccgc cgacggcgat
     2341 cttctgccag aacgaccgca cggcgatcgg ctgctacgag gcgctgaagg aagcgggact
     2401 gcggattccc gaggacatct cggtgatcgg atacgacgac gaggagattt cgcggcacct
     2461 gcacccgcgg ctcagcaccg ccatcctgcc gcaccgcgcg atgggccaat gggcgatcga
     2521 gcggctcgag gagccagtcg accggaaccg gcggcggcac ccgatcacca agctcgaatg
     2581 cctgctggtg ccgcgggatt cggtcgcgcc gccgtcccgg taaggccggc ggcggcggaa
     2641 ctgccagcga cactgcggcg gcttaaccaa acgaacaccc ggctcgcata ggatttccgg
     2701 cgcgtcgccg agggtccagc ttgccatcca cgcttgccgt catcgtgccg tgcttcaacg
     2761 agcaggaatc gatcccgttc gcggtggaaa cactgctggg ggagctcgac cgcatggtcg
     2821 cggccggact cgtggcggac tcctccttcc tgttcttcgt cgacgacggc agccgggatg
     2881 cgacctgggc ggtgctgacc gcggcgcgcg gcagggatgc gcgggtgcgc ggcctgcggc
     2941 tgtcgcggaa tttcggccac cagccggcgc tggtcgccgg catcgcggcg gtctgcgacg
     3001 aggcggacat ttcgatctcg atcgacgccg acctgcagca ggaaccggca gcgatgggcc
     3061 gcttcgtcga ggcgcatcgc gacggcgccg acatcgtgct gggggttcgg cgcgatcgcg
     3121 acagcgaccg gccgggcaag aagatcaccg cccggctgtt ctacggtgtg atgcgcatga
     3181 tgggcgtcga cgtggtgccc gaccacgccg actaccggct gctcgaccgc cgggcgatgc
     3241 gggccctgct gtcgttcccc gagaccaacc tgttcgtccg gggcatctgc tcgctgctcg
     3301 ggttcgacac ccggcaggtg accttcacag tgaaggaacg gcagttcggc aagaccaaat
     3361 attcggcgcg ccggatgctt cgcttcgcca tctatgccat cacctcgttc agcgtggtgc
     3421 cgctgcgcgc catctcgatc ctggggctgc tctgcttcct cgtgagcctc gggatggtcg
     3481 gcttcatcct gtggtcgagc ctgttcgtcg gcgacacggt gcccggctgg gcatcgacgg
     3541 cgctgccgat ctacttcctc gccggcatcc agctgctgtc gctcggcgtg gtcggcgaat
     3601 atgttggcaa gatttattcg acagtccagc accggccgcg ctggatcgaa tggcaacggc
     3661 tcgacgacgc cccgctggac ccgcgccata cggccgtgga tcgcacatcc ggcccgcgcc
     3721 cgtgagcgag gccgacccgg tatccggcga cagccgaggg gacctcgcgc tggcggcatt
     3781 cgtggggggc gcggcgttcc tcgccatcgt cgggccacgc gtcctcgacg tgaccaacat
     3841 gctgtggctc acgacgatga aggatacttt cacccactat ctgggctggg agttcttccg
     3901 ccgcgcggcc tccggctggc cgcccgggct cgacccggac tacgggatgc agttttcgag
     3961 ctcgatcatc ttttcggact cggtgccgct gctggcgctg ccgctgaaac tgctgtcacc
     4021 gctgctgccg gaggtgttcc agtacaccgg ctggtggacc ctcgcctgct tcgtgctgca
     4081 ggcgtggttc gcggtgcggc tcgtgggcct
//
LOCUS       DATAZA010000382         4239 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3993726, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000382 DATAZA010000000
VERSION     DATAZA010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4239
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3993726"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..547
                     /locus_tag="VHZ56_09640"
     CDS             <1..547
                     /locus_tag="VHZ56_09640"
                     /inference="COORDINATES: protein motif:HMM:NF021941.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEX4298274.1"
                     /translation="GKSGPARDKLLVLSEWPELAGLEDPKADVELTWLIDVVSGIRSV
                     RTEMNVPAGAKIPLVIVGAGEDTGVRVEGQLQSLLRLARLGEVSYASEVPESSAQIVI
                     GEATFALPLKGVIDIDAERVRLKRELAREEVEIDKIDKKLGNAQFVAKAKPEVIEEQR
                     ERRDEAVARHERLVAALARLN"
     gene            844..2568
                     /gene="ilvD"
                     /locus_tag="VHZ56_09645"
     CDS             844..2568
                     /gene="ilvD"
                     /locus_tag="VHZ56_09645"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020178445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEX4298275.1"
                     /translation="MDSNYVDKSRLPSRHVTEGPERAPHRSYLYAMGLTSEQIHQPII
                     GVATAWNEAAPCNISLQRQAQAVKKGVAAARGTPREFTTITVTDGMAMGHAGMKSSLA
                     SRDVIADSVELTMRGHSYDALIAMAGCDKSLPGMMMAMIRLNVPAIFIYGGSILPGKF
                     RGRDVVVQDLFEAVGLHSVGKMDDETLDELERVACPSAGSCGGQYTANTMAMVAEAIG
                     LALPYSSGIPAPYEIRDALCAKAGEQVMELLKTQLRPRQIVTRKAFENAAMTVAATGG
                     STNAALHLPAMAHEAGIEFDLFDVGEIFRKTPYIGDLKPAGRYVAKDLFEAGGIPLVM
                     KALLDGGYLHGDCMTVTGKTIAENLASVKWNDQQDVVRKTTNPISATGGVVSLRGNLA
                     PDGAIVKVAGLKSQRFVGPAHVFDNEEDCFKAVNERTYKEGEVLVIRYEGPKGGPGMR
                     EMLSTTAALYGQGMGDKVALITDGRFSGATRGFCIGHVGPEAAVGGPIALIRDGDIIT
                     LDGVTGEISVNVSEAEFAQRKKSWAPRESEYGSGAIWKYAQLVGPARYGALTNPGAKG
                     EKEQYADI"
     gene            2555..3439
                     /locus_tag="VHZ56_09650"
     CDS             2555..3439
                     /locus_tag="VHZ56_09650"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4298276.1"
                     /translation="MRIYRGAAALVSVSVVAALLAAAPVFAQDAAAPPPPAAAAPGAP
                     GMPPPVAGSAAADAAQAMASALDGAGGGISSTDQIAALDAAATAGDAMAQWQLGLMYE
                     SGEGVAQDKAKAFGYFAEIADQHADSAPKGTESDIVAHSFVKIGDYYKDGLPEAGIPK
                     DEDYSLKLLLHAASYFGDPDAQYRVGEAYLDKDELGDNPVQSARWFSLAAHKGHAPSQ
                     AKLGDILFNGASGIKSNPVEGLMWLSVASRRAVGTTDADWIGDMLNADMSVATPDQRK
                     QAADLADSIADQFGDPTD"
     gene            complement(3444..4223)
                     /gene="xth"
                     /locus_tag="VHZ56_09655"
     CDS             complement(3444..4223)
                     /gene="xth"
                     /locus_tag="VHZ56_09655"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014328215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEX4298277.1"
                     /translation="MRIATWNINGVKARMDALLKWLAEASPDVVCLQEIKSVDEAFPR
                     LEIEALGYNVETFGQKSWNGVAILSKHRFDEVTRGLPGDDADEQSRLIEGVFSTEGGA
                     IRICCIYLPNGNPVKTDKFTYKLGWMDRLIRFVEGRLALEEPFVLLGDFNIIPAPVDA
                     TFPAKWVGDALFRPESAERWRTLLNLGLVDAQRAVSDEPNYTFWDFKTFGWDRQDGIR
                     IDHVLLSPQAADRLEDVFVHREVRGWDKPSDHVPVEARLAF"
BASE COUNT          744 a         1347 c         1517 g          631 t
ORIGIN      
        1 gggcaagagc gggccggcgc gcgacaagct gctggtcctc agcgaatggc ctgagctggc
       61 aggcctcgag gacccgaagg cggacgtcga gctcacctgg ctgatcgacg tggtgtcggg
      121 catccggtcg gtgcggaccg agatgaatgt tccggccggg gccaagatcc cgctggtcat
      181 cgtcggggcc ggcgaggaca ccggggtgcg ggtggaggga cagctgcaga gcctgctgcg
      241 cctggcgcgg cttggcgagg tcagctacgc cagcgaggtg ccggaaagct cggcccagat
      301 cgtcatcggc gaggcgacct tcgcgctgcc gctgaagggc gtcatcgaca tcgacgccga
      361 gcgggtccgg ctcaagcggg agctggcgcg cgaagaggtg gagatcgaca agatcgacaa
      421 gaagctcggc aatgcccagt tcgtcgccaa ggccaagccc gaggtgatcg aggagcagcg
      481 cgagcgccgc gacgaggcgg tggcccgcca cgagcggctg gtcgccgctc tggctcgact
      541 gaactaggga ttgcacggcc gcacgtcgag gcacggacac cgcctgtgct gaatctgcaa
      601 caagggtctt gaatcctgcc tgcgcctccc gccggcaacc atttggtgag ccgccgcgcc
      661 acaatctttc cccaaacaag ggcgaggacg gacgcgggcg ggggcacctt tcggcacagc
      721 ggatcgcaac gatccattgc gtaccggacg ggcttgttcc gcccttgaac ccctggtggg
      781 cccaatcgat aagcgctttt gcacgaagcg ccggccgatc gggcaggtca ggggaatgga
      841 cagatggaca gcaattacgt cgacaagtcg cggcttccga gccggcatgt gaccgaaggg
      901 ccggagcggg cgccgcaccg ttcgtacctg tacgcgatgg gtttgacgtc cgagcagatt
      961 caccagccga tcatcggcgt ggcgacggcc tggaacgagg cggcgccgtg caacatttcg
     1021 ctgcagcgcc aggcacaggc ggtcaagaag ggcgtcgcgg cggcgcgcgg cacgccgcgt
     1081 gaattcacca ccatcacggt caccgacggc atggcgatgg gccatgcggg gatgaaatcg
     1141 tcgctggcga gccgcgacgt catcgccgac tcggtcgagc tgaccatgcg cgggcacagc
     1201 tacgacgcgc tgatcgccat ggccggctgc gacaagagcc tgccgggcat gatgatggcg
     1261 atgatccggc tcaacgtgcc ggcgatcttc atctatggcg gctcgatcct gccgggcaag
     1321 ttccgcggcc gcgacgtagt ggtgcaggat ctgttcgagg cggtcgggct gcattccgtc
     1381 ggcaagatgg acgacgaaac gctcgacgag ctcgagcgcg tggcgtgccc gtcggccggc
     1441 tcgtgcggcg gccagtacac ggccaacacc atggccatgg tggcagaggc gatcgggctg
     1501 gcgctgccgt acagctcggg cataccggcg ccatacgaaa ttcgcgatgc gctctgcgcc
     1561 aaggccggcg agcaggtgat ggaactgctg aagacgcagc tccggccgcg ccagatcgtg
     1621 acccgcaagg cgttcgagaa tgccgcgatg acggtggctg ccaccggcgg ttcgaccaac
     1681 gcggcgctgc acctgccggc gatggcgcac gaggcgggca tcgagttcga cctgttcgac
     1741 gtcggcgaga tcttccgcaa gaccccctat atcggcgacc tcaagccggc gggccggtac
     1801 gtcgccaagg acctgttcga ggccggcggc attccgctgg tgatgaaggc gctgctcgat
     1861 ggcgggtacc tgcacggcga ctgcatgacg gtgaccggca agaccatcgc cgagaacctg
     1921 gcgtcggtga agtggaacga ccagcaggac gtggtgcgca agaccaccaa cccgatctcg
     1981 gcgaccggcg gtgtcgtgtc gctgcgcggc aacctcgcgc ccgacggcgc catcgtgaag
     2041 gtggccgggc tcaagagcca gcgcttcgtc ggcccggcac acgtcttcga caacgaggag
     2101 gactgcttca aggcggtcaa cgagcgcacc tacaaggaag gcgaggtgct tgtcatccgc
     2161 tacgagggcc ccaagggcgg tccgggcatg cgcgaaatgc tgtcgaccac cgcggcgctt
     2221 tacggccagg gcatgggcga caaggtagcg ctcatcaccg acggccggtt ctcgggagcg
     2281 acgcgcggtt tctgcatcgg ccatgtcggg cccgaggcgg cggtcggcgg ccctatcgcc
     2341 ctgatccggg acggcgacat catcaccctc gacggggtga ccggcgagat ttcggtcaac
     2401 gtgtcggagg cggaattcgc ccagcgcaag aagagctggg cgccgcgcga gagcgaatat
     2461 ggctcgggcg ccatctggaa atatgcccag ctcgtggggc cggcgcgcta cggcgcgctg
     2521 accaatccgg gcgcgaaggg cgaaaaggag cagtatgcgg atatataggg gcgcggcggc
     2581 cctggtttcc gtgagcgtag tggcggcgct gcttgccgca gcgccggtgt ttgcccagga
     2641 cgcggcggcc ccgccgccgc cggcagcggc agcaccgggc gctccgggca tgccgccgcc
     2701 ggtcgcgggt tcagccgcgg ccgatgccgc gcaggcgatg gcgagcgcgt tggacggggc
     2761 cggcggcggc atttcgtcga ccgaccagat cgccgcgctc gacgccgcgg cgacggcggg
     2821 cgacgcgatg gcgcagtggc agctcgggct gatgtacgag agcggcgagg gcgtggcgca
     2881 ggacaaggcc aaggccttcg gctatttcgc cgaaatcgcc gaccagcacg cggacagcgc
     2941 ccccaagggc accgagtccg acatcgtcgc gcactccttc gtcaagatcg gcgattacta
     3001 caaggacggc ctgccggaag cgggcatccc caaggacgag gactattcgc tgaagctgtt
     3061 gctgcatgcg gcgagctatt tcggcgatcc cgatgcgcag tatcgcgtcg gcgaggcata
     3121 tctcgacaag gacgaactcg gcgacaatcc ggtgcagagc gcgcgctggt tctcgctggc
     3181 ggcgcacaag ggccacgccc cgtcgcaggc aaagctcggc gacatcctgt tcaacggcgc
     3241 cagcggcatc aaatccaatc cggtcgaggg cctgatgtgg ctcagcgtcg cgagccggcg
     3301 cgccgtgggc accaccgatg ccgactggat cggcgatatg ctcaacgccg acatgtcggt
     3361 ggcgacgccg gaccagcgca agcaggcggc ggacctcgcg gattcgatcg ccgaccagtt
     3421 cggcgacccg accgactgat gtcctagaac gccagtctcg cctcgaccgg cacgtggtcc
     3481 gacggcttgt cccagccgcg gacctcgcgg tggacgaaga catcctcgag ccgatcggcg
     3541 gcctgcggcg acagcaggac atgatcgatg cggatgccgt cctggcggtc ccagccgaag
     3601 gtcttgaagt cccagaaggt gtagttcggc tcgtcgctga cggcgcgctg ggcatcgacg
     3661 aggccgaggt tgagcagggt ccgccaacgc tcggcgcttt cgggccggaa cagcgcgtcg
     3721 cccacccatt tggccgggaa cgtcgcgtcg accggggccg ggatgatgtt gaagtcgccg
     3781 agcagcacga acggctcttc gagtgccagc cggccttcga cgaagcggat gaggcggtcc
     3841 atccagccga gcttgtaggt gaatttgtcg gtcttcaccg gattgccgtt gggcaggtag
     3901 atgcagcaga tacggatggc gccgccttcg gtcgagaata caccctcgat cagccgcgac
     3961 tgctcgtcgg cgtcatcgcc cggcaggccg cgcgtcacct cgtcgaagcg gtgtttcgac
     4021 aggattgcaa cgccgttcca gcttttctgg ccgaaggtct cgacgttgta gccgagggcc
     4081 tcgatctcaa gccggggaaa agcctcgtcg acggacttga tctcctgcag gcagacgacg
     4141 tcgggggagg cctccgccag ccacttgagc agcgcgtcca tgcgggcctt gacgccgttg
     4201 atgttccagg tcgcgatgcg catgggcgga gactagccg
//
LOCUS       DATAZA010000383         2602 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3183225, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000383 DATAZA010000000
VERSION     DATAZA010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2602
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3183225"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..489
                     /locus_tag="VHZ56_09660"
     CDS             124..489
                     /locus_tag="VHZ56_09660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006202441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEX4298278.1"
                     /translation="MTKQRLDRWLFFARAVKSRTLAQKLIESGVVRVNSERTLRTDHP
                     VGDGDVLTMTVHSRLLVWKILDPGSRRGPAPEAAGLYEDLSPTPPPRPAPAFEVRDSG
                     ARPTKKQRRDTDRLRESDG"
     gene            647..985
                     /gene="fdxA"
                     /locus_tag="VHZ56_09665"
     CDS             647..985
                     /gene="fdxA"
                     /locus_tag="VHZ56_09665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007559660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin FdxA"
                     /protein_id="HEX4298279.1"
                     /translation="MTYIVTDNCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCG
                     VCEPECPAEAIKPDTEPGLEQWLVLNTKYAAAWPNITEKRDAPADAKEWDGVEGKLEK
                     YFSEAPGEGD"
     gene            1267..1827
                     /locus_tag="VHZ56_09670"
     CDS             1267..1827
                     /locus_tag="VHZ56_09670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CarD family transcriptional regulator"
                     /protein_id="HEX4298280.1"
                     /translation="MVAKKTVQRLGFRTGEYIVYPSHGVGMITSIDEQEVAGLKLELF
                     VISFEQDKLTLRVPTAKIKSVGMRKLSEEPVVKKSLDTVTGRARVKRTMWSRRAQEYE
                     AKINSGDLIAISEVVRDLYRSDDQPEQSYSERQLFEQAMDRMSREIGAVNKLTLTEAV
                     QLIEKNLQKSPRRGPKTEPDAEEAAA"
     gene            1986..>2602
                     /locus_tag="VHZ56_09675"
     CDS             1986..>2602
                     /locus_tag="VHZ56_09675"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CatB-related O-acetyltransferase"
                     /protein_id="HEX4298281.1"
                     /translation="MDFTALAENGVLAHPSLAVGGDVTLEPPVRFLPGVVLRDTRVGA
                     YSYVANGTEIIHASIGRYCSIARDALINPGNHPAGWLTTSTIPYSDLFGRNHLRGGSD
                     SFTRYRPVDIGNDVWIGARAGIMGGVSIGDGAIVGYGAVVTADVPAYAIVGGTPARII
                     RYRFDERLIAELLAFRWWRFDLPAALRDGLEISWADPARALETLRA"
BASE COUNT          472 a          896 c          828 g          406 t
ORIGIN      
        1 cccgatcggc cgcgcgacga ctggaaggaa caccggccac gcgaaaagcg cgacctgccg
       61 ctcgatccgg attcgccgtg ggcggcgctc gccgcgctgc ggacgcccaa gcccgagtag
      121 cggttgacga agcagcggct cgaccggtgg ctgttcttcg cccgcgcggt aaagtcccgc
      181 acgctggcgc aaaagctgat cgagagcggc gtcgtgcgcg tcaattccga gcggacgctg
      241 cgcaccgacc atccggtagg cgacggcgac gtgctgacca tgaccgtgca ttctcgcctg
      301 ctggtctgga agatcctcga tcccggcagc cgtcgcggtc cggcgcccga ggccgccggc
      361 ctctacgagg atttgtcgcc aacgccgccg ccgcggcccg caccggcgtt cgaggtacgc
      421 gacagcggcg cccggcccac caagaagcag cggcgcgaca ccgatcgcct gcgcgaaagc
      481 gacggctgaa atcgcctttc gtcgcgatcg ccgcagccgc aaatcggtgc cctgccccgc
      541 ccttgcgacc cctgccaaaa aggtctagca accagccgac ttggctggcg gggccgccgc
      601 ccggctgcgg tcgaccggcc ggcgcacaag gatctttccg cctcagatga cctacatcgt
      661 caccgacaat tgcattaagt gcaaatacat ggattgcgtc gaggtttgcc ccgtcgactg
      721 cttctatgaa ggcgagaaca tgctcgtcat ccaccccgac gagtgcatcg attgcggcgt
      781 gtgcgagccg gaatgcccgg ccgaggcgat caagccggac accgagccgg gcctcgagca
      841 gtggctggtg ctcaatacca agtacgccgc ggcctggccc aatatcaccg agaagcgcga
      901 tgcgccggcc gatgccaagg aatgggacgg cgtcgagggc aagctcgaga agtacttctc
      961 cgaggcccct ggcgaaggcg actgaggctg cccatataag cggcaatgcg caaagctgcg
     1021 ccgcgcctgc agcgccggtt aacgcattga ttcggcagtt ttgattctgc tggaaaattg
     1081 tgctatggtc ctgggatcga tgcagtatcc agccccgtgc cgcaaggcac tgtttttttg
     1141 acagatacat caggcgacca accgccggtc tagcggggcc ggtggtgggt ggagctttac
     1201 tgcgaaaaca atcaggacgg tcttccgcaa agaaccggtc cggcggcggc gtcaaaggag
     1261 tagtttatgg tagccaagaa gacagtgcag cgcctcggat tcaggaccgg cgagtacatc
     1321 gtctatccgt cccatggcgt gggcatgatc acctccatcg atgaacagga agtggccggc
     1381 ctcaagctcg agctgttcgt gatctccttc gagcaggaca agctgacgct gcgcgttccc
     1441 accgccaaga tcaaatccgt cggcatgcgc aagctcagcg aggagcctgt ggtcaagaag
     1501 tccctcgata cggtgaccgg ccgcgccagg gtgaagcgca ccatgtggtc gcgccgcgcc
     1561 caggaatacg aggccaagat caactcgggc gacctcatcg ccatctccga ggtggtccgc
     1621 gacctctacc ggtccgacga ccagccggag cagtcctatt ccgagcgcca gctgttcgag
     1681 caggcgatgg accgcatgag ccgcgagatc ggggcggtca acaagctgac cctgaccgag
     1741 gccgtgcagc tgatcgaaaa gaacctgcag aaatcgccgc gccgcggtcc caagaccgag
     1801 ccggacgccg aggaagccgc cgcctgatcg acaccgatca cggctgaaca caagcgcgcg
     1861 aaccacgctc cggccaccgg cggagccgct aaggtcgcgc cgccagcgct ctgaaggggc
     1921 cggttcgtcc ggcccctttg catttttggc cgtcggcgcg ggccggccac gggcatttcc
     1981 ggatcgtgga cttcaccgct ctcgccgaaa atggcgtcct tgcccatccc agccttgccg
     2041 tcggcggcga cgtgacgctc gagccgccgg tccgcttcct cccgggcgtg gtgctgcgcg
     2101 acacccgggt gggcgcctat tcctatgtcg ccaacggcac cgagatcatc cacgccagca
     2161 tcggacgcta ctgctcgatc gcccgcgacg cgctgatcaa tccgggcaac caccctgccg
     2221 gctggctgac caccagcacc atcccctaca gcgacctgtt cggccgcaac cacctcaggg
     2281 gcggatcgga cagcttcacc cgctaccggc cggtcgatat cggcaacgat gtctggatcg
     2341 gcgcgcgtgc cggcatcatg ggcggcgtca gcatcggcga cggagccatc gtcggctatg
     2401 gcgcggtggt gaccgccgac gtgccggcct acgccatcgt cggcggcacc ccggcgagga
     2461 tcatccgcta ccgcttcgac gaacggctga tcgccgagct gctggccttc cgctggtggc
     2521 gcttcgacct gcccgccgct ctccgcgacg gcctcgagat cagttgggcc gaccccgccc
     2581 gggcgctcga gaccctgcgg gc
//
LOCUS       DATAZA010000384         1815 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_279781, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000384 DATAZA010000000
VERSION     DATAZA010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279781"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..619
                     /locus_tag="VHZ56_09680"
     CDS             <1..619
                     /locus_tag="VHZ56_09680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018011943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HEX4298282.1"
                     /translation="LFSTQFIFKAVRQNTDILVLGLLTTPEIVSSYGVARRVLDSSFL
                     SIEALNRLIYPGSAVVLMNGFHAASGRVRRVLAAAVLISTAAAASIFILSPLMPVLFG
                     HSYPSMVEFTRALCWLVVPMAVGSVALEAFGAAGRQDIRALITNTGNIGAAALVAAVT
                     WIAGINGAFASSYLVEILAAAVVWAVLLRFIQADRSRHGEPVPAE"
     gene            713..1729
                     /locus_tag="VHZ56_09685"
     CDS             713..1729
                     /locus_tag="VHZ56_09685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018062904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX4298283.1"
                     /translation="MVTLKEIAKSVGVSTATVSRVLNFDQTLSVNARKRQAIIETAEA
                     LNYATPRNRNRANQQGLNKVALVHFLRPDQELVDPYYVGLRLGIESRCQALKIETVKV
                     YHTESLPEPTLLQSASGVIAIGRHDDAEVSFLRRHARHVVFADFSPLGDDFDSVESDL
                     ALATRKLLQVLTQMGYRRIAFAGWVDVHNGITRSLPEKRCRAYIDWMTQAGLFDERLC
                     LTEANTEQSGYKLTRQILSEPTPPDALITCNDNMAVGAYRAIHEMGLSIPDDIAVASF
                     NDISVAQFMNPPLTTVHLPAEEIGETAVELLLERVAGRELAKRITLAARPIWRGSTRR
                     PPTA"
BASE COUNT          299 a          665 c          538 g          313 t
ORIGIN      
        1 gctgttttcg acccagttca tcttcaaggc cgtccgccag aacaccgaca tcctggtcct
       61 cggcctgctc accacgcccg agatcgtctc cagctacggc gtcgcccgcc gcgtgctcga
      121 cagttcgttc ctgtcgatcg aggcgctcaa ccggctcatc tatccggggt cggcggtggt
      181 gctgatgaac ggctttcacg ccgcctctgg ccgcgtccgc cgcgtcctgg ccgcggctgt
      241 gctgatcagc acagccgccg ctgcctcgat attcatactc tccccgctga tgccggtgct
      301 gttcggccac agctacccct cgatggtcga gttcacccgg gcgctctgct ggctggttgt
      361 cccgatggcc gtcgggtcgg tcgctctcga agcgttcggc gcggccgggc gccaggacat
      421 ccgcgccctc atcaccaaca ccggcaatat cggggccgcc gcgctggtcg ccgccgtgac
      481 ctggatcgcc ggcatcaacg gcgccttcgc gtcgtcctac ctggtcgaaa tcctcgctgc
      541 ggcggtcgtt tgggccgtgc tgctgcgctt catccaggcc gaccgctcgc gccacggcga
      601 gccggtgccg gcggagtagc acgacgctcc gggcaacaat ttcattgctc tgcggggcgg
      661 tttttgccaa tccaatccgg ttcgtcgggg cagaaaagcc ggttgcagag taatggtgac
      721 cctcaaggaa atcgccaagt ccgtgggcgt ttcgaccgcg acggtgagcc gcgtgctgaa
      781 tttcgaccag actctgtcgg tcaatgcccg caagcgccag gccatcatcg agacggccga
      841 ggcgctcaac tacgcgaccc cccgcaaccg caatcgcgcc aaccagcagg gcctcaacaa
      901 ggtggcgctc gtccacttcc tgcgccccga ccaggagctc gtggacccct actatgtcgg
      961 cctgcgactc ggcatcgaga gccgctgcca ggccctcaag atcgagacgg tcaaggtcta
     1021 ccacaccgaa tccctgcctg agccgacgct gctgcagagc gcctccggcg ttattgccat
     1081 cggccggcac gatgacgccg aagtcagttt cctccgccgc cacgcccgcc acgtcgtgtt
     1141 cgccgatttc tcgccgctcg gcgacgactt cgacagcgtc gagagcgatc tcgcgctcgc
     1201 cacccgcaag ctgctccagg ttctcaccca gatgggctac cgccgcatcg ccttcgctgg
     1261 ctgggtcgac gtccacaatg gcatcacccg ctcgctgccc gagaagcgct gccgcgccta
     1321 catcgactgg atgacccagg cgggcctatt cgacgagcgg ctctgcctga ccgaggccaa
     1381 taccgagcag agcggctaca agctgacccg ccagatcctc tcggagccaa cgccgccgga
     1441 tgccctgatc acctgcaacg acaacatggc cgtcggcgcc taccgcgcca tccacgaaat
     1501 ggggctttcg atccccgacg acatcgccgt cgcgagcttc aacgacattt ccgttgccca
     1561 gttcatgaat ccgccgctca ccaccgtcca cctgccggcc gaagagatcg gcgagaccgc
     1621 ggtggaactg ctgctcgagc gggtcgccgg tcgcgagctc gccaagcgca tcacgctggc
     1681 cgcccgaccg atctggcgcg gcagcacgcg gcgcccgccg accgcctgaa acggccggga
     1741 taaatattta ctgaaatatt gcgccgcgtg gatcggcccg ctaacaatgg ggcacgaggc
     1801 agggaggagc ctgcc
//
LOCUS       DATAZA010000385         1743 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2486051, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000385 DATAZA010000000
VERSION     DATAZA010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1743
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2486051"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            50..496
                     /locus_tag="VHZ56_09690"
     CDS             50..496
                     /locus_tag="VHZ56_09690"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003531625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HEX4298284.1"
                     /translation="MSEILFYHLEAQPLERALPLLLEKTLERGWRAVIETSSRERADA
                     LDAMLWTFRDDSFLPHGIAGDATDPDQPVLIATDAGNANAATVRFFVDRAVPASGEGY
                     ERIVYLFSGHDPDAVAEARVAWKALGSGNALTYWQQDESGRWAKRG"
     gene            complement(493..1620)
                     /locus_tag="VHZ56_09695"
     CDS             complement(493..1620)
                     /locus_tag="VHZ56_09695"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEX4298285.1"
                     /translation="MSEGPSRRLAALDGLRGWAALSVVVFHLSWETFGALFPIYRSFP
                     AALLGNGNFAVALFLMVSGYVLTVRGWHEPDKTAVRRSIVKRYFRLTIPIFVAVMLFY
                     AVLKLGWALWPAASQIVHRPDWLSGFGNFHTSLLSAAWFGLVGLYVTTRTFQYGPFLW
                     TMTAELWGSYLVLALCLFEMPRRWSYGPLAILTVLGLLLPLEPFFPMAACYPAGALVA
                     LMSRDGLIASGLPSRTESRVATAMAVAAYVAGSLADKSPSEVIAMTLLAMVLFVAAMR
                     SGPVSAFLSLPLSQWLGRISFPLYLVQILIIMTISSGLILLAQDAGLLTARTALGIVA
                     VSLAACLAAAQLFMPVERLALSVAARIGRRTRPAPAPAGPA"
     gene            complement(1617..>1743)
                     /locus_tag="VHZ56_09700"
     CDS             complement(1617..>1743)
                     /locus_tag="VHZ56_09700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018429706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX4298286.1"
                     /translation="PPHGWQSARSLGDWTLVGCTVAPGFEFAHFELAPPNWSPGQ"
BASE COUNT          323 a          616 c          571 g          233 t
ORIGIN      
        1 tcggcgtcgc tttgctcgat cgcttcgtgc gcgacggcta cgaagaggca tgagcgaaat
       61 cctgttctat cacctcgagg cccagccgct ggagcgggcc ttgccgctgc tgctcgaaaa
      121 gaccctcgag cgtggctggc gtgctgtgat cgaaacctcg agccgcgaac gggcggacgc
      181 tctcgacgcc atgctctgga ccttccgcga cgacagcttc ctgccgcacg gcatcgccgg
      241 cgatgcgacc gacccggacc agccggtgct gatcgcgacc gatgccggca atgccaacgc
      301 ggcgaccgtc cgcttcttcg tcgaccgcgc ggttccggct tcgggcgaag gctatgagcg
      361 gatcgtctat ttgttctcgg gccacgatcc cgacgccgtc gccgaggccc gcgtcgcctg
      421 gaaagcgctc ggttccggca acgcgctcac ctactggcag caggacgaat ccggccgctg
      481 ggccaagcgc ggctaggccg gacctgccgg agccggggct ggcctggtcc gccggccgat
      541 gcgggccgcc acgctcagcg ccagccgttc gaccggcatg aacagctgcg ccgccgcgag
      601 gcacgccgcc agcgagacgg ccacaatccc gagcgccgtg cgagccgtca gcaaccctgc
      661 atcctgcgcc agcaggatga gccccgagct gatggtcatg atgatgagga tctgcaccag
      721 gtacagcgga aagctgatcc gcccgagcca ctgcgacaga ggcagcgaca ggaacgccga
      781 caccggcccg ctgcgcatcg cggcgacgaa cagcaccatg gcaagcaggg tcatcgcgat
      841 cacctcggag ggcgacttgt ccgccagcga tccggcgacg tacgcggcga ccgccatcgc
      901 tgtcgccacc cggctttcgg tccgcgatgg caggcccgat gcgatcagcc cgtcccggct
      961 catcagcgcc accagcgccc ctgccggata gcacgccgcc atcgggaaga acggctccag
     1021 cggcagcagc aggccgagca cggtgaggat cgcaagcggt ccataggacc agcgcctggg
     1081 catctcgaac aggcacagcg ccaggacgag gtaggagccc cagagttcgg ccgtcatcgt
     1141 ccacaggaat ggcccgtact ggaacgtgcg agttgtgacg tagaggccga caagtccgaa
     1201 ccacgcggcg ctcaggaggc ttgtgtggaa attgccgaag ccgctcagcc agtccggccg
     1261 atgaacgatc tgtgaggctg ccggccagag cgcccacccc agtttcagga ccgcgtagaa
     1321 cagcatgacg gcgacgaaga tcggaatggt cagcctgaaa tagcgtttta cgatcgagcg
     1381 ccgcaccgcc gtcttgtcgg gctcgtgcca gccgcgcacc gtcagtacgt atcccgacac
     1441 catcaggaac agcgccacgg cgaaattgcc gttgccgagg agcgccgccg gaaacgaccg
     1501 atagatcgga aacagcgcgc cgaacgtctc ccagctcagg tggaagacca cgaccgagag
     1561 cgctgcccag ccgcgcaagc cgtcgagtgc cgccagccgc cgcgagggcc cctcgctcac
     1621 tggccgggcg accagttcgg tggcgccagc tcgaaatgcg cgaactcgaa tcccggcgcc
     1681 accgtgcagc ccaccagggt ccagtcgccg aggctgcgcg ccgactgcca gccgtgcggc
     1741 ggc
//
LOCUS       DATAZA010000386         6764 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_744189, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000386 DATAZA010000000
VERSION     DATAZA010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6764
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_744189"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(165..1637)
                     /locus_tag="VHZ56_09705"
     CDS             complement(165..1637)
                     /locus_tag="VHZ56_09705"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014762525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEX4298287.1"
                     /translation="MPLTDALTQHLKVKDLIPAAALVGGEWTERADSGRSFEVHNPST
                     GDLLATLPDLGVAETKRAIAAAADAQAAWAQKTGKARAAVLRRMFELMMAHQHDLAAI
                     MTAEQGKPLAEAMGEIAYGASYVEWFGEEAKRVYGDTIPGHQEDKRIIVIKQPVGVVA
                     TITPWNFPNSMLARKLAPALAAGCAVVSKPAEQTPLSAIALARLAELAGLPKGLFSLI
                     LSTDAAAIGQEFCSNETVRKLSFTGSTAVGRTLMRQAADQIKRLGLELGGNAPFIVFD
                     DADLDAAVEGALVSKYRNNGQTCVCANRLYVQAGVYEAFAEKLVTATRKLQVGDGFAD
                     GTTLGPLIDQKAVAKVERHLRDAVDKGAKVLLGGHPKEGLFFEPTVLGGATADMLLAR
                     EETFGPVAPLFRFDTVEEVIELANATEFGLASYFYARDLSRVFKVAEALDYGMVGINT
                     GLISTEVAPFGGVKQSGHGREGSKYGIEEYLDIKYLCLSL"
     gene            complement(1754..2029)
                     /locus_tag="VHZ56_09710"
     CDS             complement(1754..2029)
                     /locus_tag="VHZ56_09710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HEX4298288.1"
                     /translation="MKTVAARITGVVQGVGYRAWAEAAARSRGLSGWVRNRRDGSVEA
                     LISGADAQVDDMLAYFWQGPGASRVERVEVEVAGHPMQLGFRTLPTA"
     gene            complement(2026..2523)
                     /locus_tag="VHZ56_09715"
     CDS             complement(2026..2523)
                     /locus_tag="VHZ56_09715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298289.1"
                     /translation="MKLLFADPTPRWVPFVAALLILGGVWFGANLSRFPITFTIDLVV
                     GLAGVLLVALFFQGRYYWTGQVLRLSGDGMKYEIVTSVWIGAGRRIGFAATEAKEWSA
                     KGGNPAASGRPELASVHFRVRGARLAMNFAGPKVIDLGGLSAINPAFFAKLRRDYPGL
                     KSIGG"
     gene            complement(2520..3554)
                     /locus_tag="VHZ56_09720"
     CDS             complement(2520..3554)
                     /locus_tag="VHZ56_09720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003550946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX4298290.1"
                     /translation="MELRRLGNSGTIVSAWCLGTMTFGAEADEATSFALMDAYARAGG
                     NFLDTADVYSNGAAEEIVGRWLKARPTEARQMVVATKGRFPMGDGPNDLGLSRRHLGV
                     ALEDSLRRLGVERIDLYQMHAWDGLTPLEETLRFLDDAVRAGKIAYYGFSNYLGWQLT
                     KAVQVAKFMGYAPPVTLQPHYNLIVRDIEFEIVPACLDAGMGLLPWSPLGGGWLTGKY
                     KRDTTPTGATRLGENPNRGQESYAGRNASERVWAIIDELEAIGTARGVSMAEVALAWL
                     CGRPAVTSVILGARTTEQLAQNLKADGLKLTAEEVARLDAASAPVMGDYPYGKGGSGQ
                     RTRPMAGGRA"
     gene            complement(3554..5104)
                     /locus_tag="VHZ56_09725"
     CDS             complement(3554..5104)
                     /locus_tag="VHZ56_09725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="altronate dehydratase family protein"
                     /protein_id="HEX4298291.1"
                     /translation="MSEVMSQPAAKTLLLNPADNVAVALSNLDVGTLTAQGVRTTKRV
                     PRGHKFTVKPVRSGEAIVKFGQIIGFAKTDLPAGEWVHEHNCSIGEDHGAFNRDYAFS
                     EGVVPVDFVPEGQRATFEGYHRPNGSVGTRNYVGILTSVNCSTTVAGFIAREIERSGI
                     LADYPNIDGIVALKQANGCIIDYRGVIFDTLKKTTWGYATNPNMGGVIMVGLGCEGFQ
                     IPKLKEAYGVTENETFRTMTIQEQGGTKKTVAAGVEAVAAMLPVVNKVTRQTAPASEL
                     MLALQCGGSDGYSGITANPALGYAADILVRHGGTAILSETPEIYGAEHLLTRRARTPE
                     VGQKLIDIIHWWEDYTQRNNMELNNNPSPGNKLGGLTTILEKSLGAAAKGGTTPLNAV
                     YHYADPVTEKGFVFMDTPGYDPVSATGQVAGGANILAFTTGRGSAYGCKPTPSIKIAT
                     NSEMYHRMIDDMDINGGEVVEGSSLEAKGQEIFDTILRVASGEKTKSELLGYGDNEFV
                     PWQIGATI"
     gene            5172..5915
                     /locus_tag="VHZ56_09730"
     CDS             5172..5915
                     /locus_tag="VHZ56_09730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008840197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX4298292.1"
                     /translation="MTAAEIPYKFLVSSSAPPRGSVTQAVTEQLRSAIVTLALQPGEI
                     LDKGAICARLGVSRFPVSEALARLQAEGLVEIMPQRGSMVSRVRIGDVVEYMLIRRAL
                     ESEAVRALVARRTPDLVEKLEANLAEQTRAARRGDRESFHTYDLEFHEILFGAMQFAR
                     IRSVIDAARANLDRARRLILDPRRLTLTQSEHRAIVDGIAAGDADRAAAAMRAHIDKV
                     TGELLVFARQAPELFADGERFADGTLPFG"
     gene            5927..6361
                     /locus_tag="VHZ56_09735"
     CDS             5927..6361
                     /locus_tag="VHZ56_09735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018244616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_function: GO:0048029 - monosaccharide binding [Evidence
                     IEA];
                     GO_process: GO:0005996 - monosaccharide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RbsD/FucU domain-containing protein"
                     /protein_id="HEX4298293.1"
                     /translation="MLKGIPHILSPELLHALQAMGHGDEITIVDGNYPGASAGPRLVR
                     ADGHSGTDLLEAILSLMPLDDFVPDPAIVMQVVGDAGKRPPVVDAYASIVARYEPKVA
                     LASLERFAFYKRANSGYAIVQTGEQRLYGNIILKKGVIRPDG"
     gene            6454..>6764
                     /locus_tag="VHZ56_09740"
     CDS             6454..>6764
                     /locus_tag="VHZ56_09740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006173690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyhepta-2,4-diene-1,7-dioate isomerase"
                     /protein_id="HEX4298294.1"
                     /translation="MKLLRVGARGAEKPAILHSDGTYRDLSTIVPDLKGDALTPAGLQ
                     KIRAADASKLPVLDGKLRIGPCVGFVGKFICVGLNYADHAAETGAAIPKEPILFAKAT
                     SA"
BASE COUNT         1048 a         2490 c         2067 g         1159 t
ORIGIN      
        1 cttgcccgat ccaagcgcgg gctctggatg tttgccgaaa cctcgtcgcg ccccgcctac
       61 gcgccggccc gcagcttcta ccgcaaggcc ggcttcgagc aggtgtcgcg ttacgagagc
      121 ttctacgagc cgggagacga caaggtggtc ttccggctgc agctctagag gctcaggcac
      181 agatacttga tgtcgaggta ttcctcgatg ccgtatttgc tgccctcgcg cccgtgtccc
      241 gattgcttga cgccgccgaa cggcgcgacc tcggtcgaga tcagcccggt gttgatcccc
      301 accatgccgt agtcgagcgc ttcggccacc ttgaacaccc ggctcaaatc tcgggcgtag
      361 aaatacgacg ccagcccgaa ctcggtggcg ttggccaact cgattacctc ctccaccgtg
      421 tcgaagcgaa acagcggcgc caccgggccg aaggtttcct cgcgcgccag cagcatgtcc
      481 gccgtcgcgc cgccaagcac cgtcggctcg aagaacagcc cctctttcgg atggccgccg
      541 agcagcactt tcgccccctt gtcgacggcg tccctgagat gccgctcgac cttcgccacc
      601 gccttctggt cgatcagtgg ccccagcgtc gtgccgtccg caaagccgtc gccaacctgc
      661 aacttgcggg ttgccgttac gagcttctcc gcgaacgcct catagacccc ggcctgcacg
      721 tagagccggt tggcgcacac gcaggtctgg ccgttgttgc ggtacttgct gaccagcgcg
      781 ccttcgaccg ccgcgtcgag gtcggcgtcg tcgaacacga tgaacggcgc gttgccgccg
      841 agctcgaggc ccagccgctt gatctggtcg gccgcctgcc gcatcagcgt ccgcccgacc
      901 gccgtcgagc cggtgaagct cagcttgcgc accgtctcgt tggaacagaa ttcctgtccg
      961 atcgccgccg cgtcggtcga caggatcagg ctgaacagcc ctttcggcag cccggccagt
     1021 tccgccagcc gcgccagcgc aatggcgctc agcggcgtct gctcggccgg cttgctgacc
     1081 accgcgcatc cggcggccag cgccggcgcc agcttgcgtg ccagcatcga gttcggaaaa
     1141 ttccacggcg tgatcgtcgc caccacgccc accggctgct tgatgacgat gatccgcttg
     1201 tcctcctggt ggccggggat ggtgtcgcca tagacgcgct tggcctcctc gccgaaccac
     1261 tccacatagc tcgcgccata ggcgatctcg cccatcgcct cggccagcgg cttgccctgt
     1321 tcggcggtca tgatcgccgc gaggtcgtgc tggtgcgcca tcatcagctc gaacatccgg
     1381 cgcagcactg cggcgcgcgc cttgccggtc ttttgcgccc acgccgcctg ggcatcggcc
     1441 gccgcggcga tcgcccgctt cgtctcggcg acaccaaggt cgggcaacgt cgccagcaag
     1501 tcgccggtcg atgggttgtg cacctcgaag ctccgcccgc tgtcggcgcg ctcggtccat
     1561 tctccgccca ccagggcggc ggcagggatc aggtccttga ccttgaggtg ttgggtgagg
     1621 gcgtcggtga gcggcatggc agggctccgt cggcgcgccc ttggtgtcgg cgcgctcctc
     1681 ggcaagattt aggctccgct tccagcccta tcaagcttgg gcagccatga cgcttggcga
     1741 cgggaacgcc gactcacgcc gtaggcagcg tccggaagcc gagctgcatc ggatgccccg
     1801 ccacctcgac ctcgacccgc tcgacccggc tggcccctgg cccctgccag aaatacgcca
     1861 gcatgtcgtc gacctgcgcg tcggcacccg agatcagggc ctcgacgctg ccgtcgcggc
     1921 gattacgcac ccagcccgac agcccccgcg agcgcgccgc cgcctcggcc caggcgcgat
     1981 agccgacgcc ctgcacgacg ccggtgatgc gcgccgcaac cgtcttcatc cgccgatgct
     2041 cttcaacccc ggatagtcgc ggcggagctt ggcgaagaat gccggattga tcgcgctcag
     2101 cccgccaagg tcgatcacct tcggcccggc gaaattcatc gccagccgcg cgccgcgcac
     2161 cctgaaatgg acgctcgcga gctctggccg gccgctggcc gccgggttgc cgcccttcgc
     2221 gctccattcc ttcgcctcgg tcgcggcaaa gccgatccgg cgcccggcgc cgatccagac
     2281 cgaggtcacg atttcgtatt tcatgccgtc gccgctgagg cgcagcacct gccccgtcca
     2341 gtagtaccgg ccctggaaga acagcgcgac cagcagcacc cccgccagcc ccaccacgag
     2401 gtcgatggtg aaggtgatgg ggaagcggct gaggttggcg ccgaaccaca ccccgccgag
     2461 gatcagcagg gcggcgacga acggcaccca gcgcggggtc gggtccgcga acagcagctt
     2521 cacgcccgtc ccccagccat cggccgcgtg cgctggccac tgccgccctt gccgtaggga
     2581 tagtcgccca tcaccggcgc gctcgccgca tcgagccgcg cgacctcctc ggcggtgagc
     2641 ttcagcccgt cggccttgag gttctgcgcc agttgctcgg tggtacgcgc cccgaggatc
     2701 accgacgtca cggccggccg gccgcacagc cacgccagtg ccacttcggc catgctcacg
     2761 ccccgcgccg tgccgatcgc ctcgagttcg tcgatgatcg cccacacccg ctcggaggca
     2821 ttgcggccgg cataggattc ctgcccgcga ttgggatttt cgcccagccg cgtcgcgccg
     2881 gtcggggtcg tgtcgcgctt gtacttgccg gtcagccagc cgccgccgag cggcgaccac
     2941 ggcagcaggc ccatcccggc gtcaaggcag gccgggacga tctcgaattc gatatcgcgg
     3001 acgatcagat tgtagtgcgg ctgcagcgtc accggcggcg cgtagcccat gaacttcgcg
     3061 acctgcaccg ccttggtcaa ctgccagccc agatagttgg aaaacccgta ataggcgatc
     3121 ttgccggccc gcaccgcatc gtcgaggaag cgcagcgtct cctcgagcgg cgtcagcccg
     3181 tcccaggcat gcatctggta gaggtcgatc cgctcgaccc cgagccggcg cagcgaatcc
     3241 tcgagcgcca cgcccaaatg ccgccgcgac aggccgaggt cgttgggccc gtctcccatc
     3301 gggaaccggc ccttggtggc gaccaccatc tgccgcgctt cggtcggccg cgccttcagc
     3361 cagcggccga cgatttcttc cgccgcgccg ttcgaataga cgtctgccgt atcgaggaag
     3421 ttgccgcccg ccctggcata ggcgtccatc agcgcgaacg acgtcgcctc gtccgcctcc
     3481 gccccgaagg tcatcgttcc gaggcaccac gccgaaacga tcgtgccgct gtttcccagg
     3541 cgcctgagtt ccattagatc gttgctccaa tctgccaggg aacgaactcg ttgtcgccgt
     3601 agccgagcag ttccgatttg gtcttttcgc ctgatgcgac gcgcaggatg gtgtcgaaga
     3661 tctcctgccc cttggcctcc agcgaggagc cctcgaccac ttccccgcca ttgatgtcca
     3721 tgtcgtcgat catccggtga tacatttcgc tgttcgtcgc gatcttgatc gacggcgtcg
     3781 gcttgcagcc ataggccgag ccgcggccgg tggtgaaggc caggatgttg gcgccgcccg
     3841 ccacctgccc ggtcgccgac accggatcgt agccgggcgt gtccatgaac acaaaaccct
     3901 tctcggtcac cggatcggca tagtgataga ccgcattgag cggcgtcgtg ccgcccttgg
     3961 ccgccgcacc cagcgatttt tcgaggatgg tggtcagccc gccgagcttg ttgccgggcg
     4021 aggggttgtt gttgagctcc atgttgttgc gctgcgtgta gtcttcccac cagtggatga
     4081 tgtcgatcag cttctggccg acttccggcg tccgcgcccg ccgcgtcagc aggtgctcgg
     4141 cgccatagat ttccggcgtc tccgaaagga tcgcggtgcc gccgtggcgg acgaggatat
     4201 ccgccgcata gccgagcgcc ggattggccg tgatccccga atagccgtcc gacccgccgc
     4261 actgcagcgc cagcatcagc tcactggccg gcgccgtctg ccgcgtcacc ttgttgacca
     4321 ccggcagcat ggccgccact gcctcgacgc ccgccgcgac tgttttcttc gtgccgccct
     4381 gttcctggat cgtcatcgtc cggaacgtct cgttctcggt gacgccgtag gcttccttga
     4441 gcttggggat ctggaaaccc tcgcagccga gcccgaccat gatcaccccg cccatgttcg
     4501 gattggtcgc atagccccat gtcgtcttct tcagcgtgtc gaagatgacg ccgcgatagt
     4561 cgatgatgca gccattggcc tgcttcagcg ccacgatccc gtcgatgttg ggatagtccg
     4621 cgagaatacc gctccgctcg atctccctgg cgatgaaccc ggccaccgtc gtcgaacagt
     4681 tcaccgaggt gaggatgccg acatagttgc gcgtcccgac gctgccgttc ggacggtggt
     4741 agccctcgaa cgtcgcgcgc tgtccctcgg gcacgaaatc caccggcacc acgccctcgc
     4801 tgaaggcata gtcgcggttg aacgcgccgt gatcctcgcc gatcgagcaa ttgtgctcgt
     4861 gcacccattc accggccggc aggtcggtct tggcaaagcc gatgatctgc ccgaacttga
     4921 cgatcgcctc gccacttcgc accggcttca ccgtgaattt gtggccgcgc ggcacgcgct
     4981 tggtcgtccg caccccctgc gcggtcagcg ttccgacatc gaggttgctg agcgccacgg
     5041 cgacgttgtc ggccgggttg agcagcagcg tcttggcggc gggctgcgac atgacttcag
     5101 acatggcaat gatctctgct aagccttgcg gggcggttgc gtcgccgcct cgatccaact
     5161 aacatgttag catgaccgcg gcggaaatcc cctacaaatt tctggtatcg tccagcgcgc
     5221 cgccgcgcgg cagcgtcacc caggcggtca ccgagcagct gcgctccgcc attgtgacgc
     5281 ttgccctgca gcccggcgaa atcctcgaca agggcgccat ctgcgcccgc ctcggcgtct
     5341 cgcgctttcc ggtgtccgag gcgctggccc ggctgcaggc cgaagggctg gtcgagatca
     5401 tgccgcagcg cggctcgatg gtcagccgcg tccgcatcgg cgacgtcgtc gaatacatgc
     5461 tgatccgtcg cgccctcgaa agcgaggcgg tccgtgccct ggtcgcccgc cgcaccccgg
     5521 atctcgtcga aaagctcgaa gccaacctcg ccgagcagac ccgcgccgcc cgtcgcggcg
     5581 accgcgagag ctttcacacc tacgatctgg aattccacga gatcctgttc ggcgccatgc
     5641 agtttgcccg catccgctcg gtcatcgacg ccgcccgcgc caatctcgat cgcgcccgcc
     5701 ggctgatcct cgatccgcgc cggctgacgc tcacccagtc cgagcaccgc gccatcgtcg
     5761 acggcattgc cgcgggcgac gccgaccgcg ccgccgccgc catgcgcgcg catatcgaca
     5821 aggtcaccgg cgaactgctg gtcttcgcgc gccaggcgcc cgaacttttc gccgacggcg
     5881 agcgcttcgc cgacggcacg ctgccattcg gctgacaggg ggaacgatgc tcaagggcat
     5941 tccacacatt ctgagcccgg aactgctgca cgcgctgcag gccatgggcc atggcgacga
     6001 gattaccatc gtcgacggca actatcccgg cgccagcgcc ggcccgcggc tggtccgcgc
     6061 cgacggccac agcggcaccg atctgctcga ggcgatcctc agcctgatgc cactcgacga
     6121 tttcgtgccc gacccggcca tcgtcatgca ggtggtaggc gacgccggca agcgcccgcc
     6181 ggtggtcgac gcctacgcca gcatcgttgc ccgctacgag cccaaggtcg cgctcgcctc
     6241 gctcgagcgc ttcgccttct acaagcgcgc caattccggc tacgccatcg tgcagaccgg
     6301 cgagcagcgc ctctacggca acatcatcct caagaagggc gtcatccggc ccgacggctg
     6361 aaccgtcgac cgaacccgat catccaaagt cgccctcgcc taacccggcc gccctggcat
     6421 agagcggcac cagccacaga cggagctatc cccatgaaac tgctgcgagt gggcgccagg
     6481 ggcgccgaga agccggccat cctccattcc gacgggacct atcgcgatct ctcgacgatc
     6541 gtgccggacc tcaagggcga cgccctcacc ccggccgggc tgcagaagat ccgcgccgcc
     6601 gatgcatcga agcttcccgt cctcgacggc aagctgcgca tcggcccctg cgtcggcttc
     6661 gtcggcaagt tcatctgcgt cggcctcaac tacgccgacc atgccgccga gaccggcgcg
     6721 gccatcccca aggagccgat cctcttcgcc aaggcgacca gcgc
//
LOCUS       DATAZA010000387         5670 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2602134, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000387 DATAZA010000000
VERSION     DATAZA010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5670
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2602134"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..330
                     /locus_tag="VHZ56_09745"
     CDS             <1..330
                     /locus_tag="VHZ56_09745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HEX4298295.1"
                     /translation="DELNAPALSELAGLDDSGFRKLFSGSPVKRIGVARFLRNVLIAI
                     GNSGDDGLAPSAERQLSHADPLVRGAAVWATRRLVAPDRAARLALDFLPAETDTAVRA
                     EWVGELV"
     gene            330..1202
                     /locus_tag="VHZ56_09750"
     CDS             330..1202
                     /locus_tag="VHZ56_09750"
                     /EC_number="1.1.1.290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4298296.1"
                     /translation="MKLFFFGMGYSSLATARAVHQSIDPDVPVAGTTRTEEGIERLAE
                     SPYRLHLFDGMAPGATLGADLARATHVVLSIPPNDSGDPALNLHRADLDRAPDLQWLC
                     YYSTVGVYGDFGGAWVDESAPTRPVNRRSRQRVEIEQAWRDYAAGRGVPLLVLRLAGI
                     YGPGRSAFDKLREGTARRIVKPEQVFNRIHVDDIGRITALAARQRLGGTFNLSDDEPA
                     PPQDLVEYAAIKLGLPVPPAVPFEAAQMTEMARSFYADNKRVANGAIKTALHTGLEFP
                     NYRAGLDAIFEQPA"
     gene            1199..1864
                     /locus_tag="VHZ56_09755"
     CDS             1199..1864
                     /locus_tag="VHZ56_09755"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018897212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEX4298297.1"
                     /translation="MSPPRPATGAPQRVVLEGRYARLEPIAVRHVADLYRAATEAGAD
                     GRFAYLFEEAPDSEADMAAYVQKVSAQDDPLLFAVIDRASGRAEGRQALMRIVPEHGV
                     IEIGAIYWGPRMARTRLATEALFLHARYIFEELGYRRFEWKCNDRNAPSKKAAERFGF
                     AFEGIFRQHMIQKGENRDTAWFAMLDGDWPRLRAEYERWLEPANFDADGAQKTPLRTR
                     PAG"
     gene            complement(1861..2607)
                     /locus_tag="VHZ56_09760"
     CDS             complement(1861..2607)
                     /locus_tag="VHZ56_09760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX4298298.1"
                     /translation="MPEILAVGDRQLAVLRRPGRTPGLFWLGGFKSDMIGAKAETVDA
                     FGASHGLAVTRFDYSGHGRSGGDFNLGTVSRWLEEAEAVFATTAGPQLVVGSSMGGWL
                     ALLLLRQLRRSGAPRVHGLVLIAPATDMTELMLAQMPAKYRKLLDRQGFIDTPSDYAA
                     EPYRINRTLIEDGRQHLLFGRAIETGCPVAILQGARDRDVPKEHALKLVQHLLSDPVT
                     LTLVPDGDHRLSRPQDLELLSRTIERMLAD"
     gene            2750..3286
                     /gene="infC"
                     /locus_tag="VHZ56_09765"
     CDS             2750..3286
                     /gene="infC"
                     /locus_tag="VHZ56_09765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010912915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEX4298299.1"
                     /translation="MRRPMRPVAPQKDGPLSNEDIQSPEVQLIDAEGVNKGAIKTRDA
                     IAEAQELGLDLVIIAANSTPPVAKMLDLGRFKYSAQKKAAEARKKQKVIEVKEIQLRP
                     NIDTHDYETKMKAVSRFLEDGDRVKVTMRFRGREMAHQDIGMNLLVKVQQEMEARAKV
                     ESSPRSEGRQMVMVLAPK"
     gene            3373..3798
                     /locus_tag="VHZ56_09770"
     CDS             3373..3798
                     /locus_tag="VHZ56_09770"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX4298300.1"
                     /translation="MQFDQRQTIGFQAAQLARLIANRLREALAPLGLMPAQVAALIEI
                     GRAEGLTQKQLVERLDVEQPGVARTLNGLEADGWILRQAKIGRAQGLYLTDRSRAALP
                     EAARLAAEINGQALAELSRTEQAHLLDRLDELISGLRTA"
     gene            3923..4123
                     /gene="rpmI"
                     /locus_tag="VHZ56_09775"
     CDS             3923..4123
                     /gene="rpmI"
                     /locus_tag="VHZ56_09775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013946006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEX4298301.1"
                     /translation="MPKMKTKSGAKKRFKMTASGRVKAGVAGKRHRLSSHNADYIRRH
                     RGTKILHKGDESLVKWYMPYNR"
     gene            4136..4537
                     /gene="rplT"
                     /locus_tag="VHZ56_09780"
     CDS             4136..4537
                     /gene="rplT"
                     /locus_tag="VHZ56_09780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEX4298302.1"
                     /translation="MSRVKRGVTNHARHKKVLKAAEGFYGRRKNTIRAAKAAVDKAGQ
                     YAYRDRRAKKRNFRALWIQRINAAVREHGLTYGRFIDGLVKAEIAVDRKVLSDIAITE
                     PAAFAAIVAQSKKALGYLGEIEQTTAERVSA"
     gene            4637..>5670
                     /gene="pheS"
                     /locus_tag="VHZ56_09785"
     CDS             4637..>5670
                     /gene="pheS"
                     /locus_tag="VHZ56_09785"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEX4298303.1"
                     /translation="MTLEAEITRLRAELGAAIAAAADDGALEAVRVASLGKKGSVSAL
                     LAMLGNMPADERKSAGAAINGLKTAITDLLESKGATLRSAGLEARLKAERVDVTLPVR
                     PAPTTLGRIHPVSQVWDEITAIFSDMGFRIAEGPDIETDWYNFTALNFPEGHPAREMH
                     DTFFLEPGPDGTRKVLRTHTSPVQIRVMKQDTGKPAAPYLTAPMAPPIRVVMPGRTYR
                     HDSDQTHTPMFHQVEGLVIDKSSHIGQLRWVLTEFLKAFFEVEGVTLRFRPSFFPFTE
                     PSMEVDVQCDRSGAEIKIGEGSDWLEILGCGMVHPNVLRNCGLDPDVYQGFAWGMGID
                     RLAMLKYGMP"
BASE COUNT          985 a         1884 c         1972 g          829 t
ORIGIN      
        1 gacgagctca acgcaccggc gctgagcgag ctggcggggc tcgatgacag cggcttccgg
       61 aaactgttca gcggctcacc ggtcaagcgc atcggcgtcg cgcgattcct gcgcaacgtg
      121 ctgatcgcca tcggcaacag cggcgacgac gggctggcac cgagcgccga acgacagttg
      181 tcgcacgccg acccgctggt gcggggggcc gcggtatggg cgacgcggcg gctcgtcgcg
      241 ccagaccgcg cggcgcgatt ggcgctggac tttctgccgg ccgagaccga cacagccgtc
      301 cgcgcagagt gggtcggcga gctggtctga tgaaactgtt cttcttcggc atgggctatt
      361 cgtcgctggc gacggcgcgg gccgttcacc agagcatcga tcccgacgtc ccggttgcgg
      421 gcacgacccg caccgaggag gggatcgaac ggctggccga gagtccctat cggctgcacc
      481 tgttcgacgg catggcgcca ggcgcgacgc tcggcgccga cctcgccagg gcgacgcatg
      541 tggtgctgtc gatcccgccc aatgacagcg gcgacccggc gctcaatttg caccgcgccg
      601 acctcgaccg ggcgccggac ctgcaatggc tgtgctacta ctcgaccgtc ggcgtgtatg
      661 gcgatttcgg cggggcgtgg gtggacgaga gtgccccgac gcgcccggtg aaccggcgca
      721 gccggcagcg ggtcgagatc gagcaggcat ggcgcgacta cgcggcaggg cgcggcgtgc
      781 cgctgctggt gctgcggctg gccggcatct acgggccggg gcggtcggcg ttcgacaagc
      841 tgcgcgaggg gacggcgcgg cggatcgtca agccggagca ggtgttcaac cgcatccatg
      901 tcgacgacat cggccggatc acggcgctgg cggcgcggca gcggctcggc ggaacgttca
      961 atctcagcga cgacgaaccg gcgccgccgc aggacctcgt cgaatatgca gcgatcaagc
     1021 tcgggctgcc ggtgccgccg gcggtgccgt tcgaggcggc gcagatgacg gaaatggcgc
     1081 gcagctttta tgccgacaac aagcgggtgg cgaacggcgc gatcaaaacg gcgctccaca
     1141 ccgggctcga gtttccgaac taccgcgccg ggctcgacgc gatcttcgag cagccggcat
     1201 gagccctccc cgccccgcca cgggcgcgcc gcagcgcgtg gtgctcgagg gccgctacgc
     1261 gcggctcgaa ccgatcgcgg tcaggcacgt ggccgacctc tatcgtgccg cgaccgaagc
     1321 cggcgccgac ggccgcttcg cctatctgtt cgaggaggcg cccgacagcg aggccgacat
     1381 ggccgcctat gtgcagaagg tgagcgcgca ggacgacccg ctgctgttcg cggtgatcga
     1441 ccgcgcgagc ggccgggccg agggccggca ggcgctgatg cgcatcgtgc ccgagcacgg
     1501 ggtcatcgag atcggcgcga tctactgggg gccgcggatg gcgcgcacgc gcctcgctac
     1561 cgaggcgctg ttcctccacg cccgctacat cttcgaggag ctcggctacc ggcgcttcga
     1621 gtggaagtgc aacgaccgga acgcgccgag caagaaggcg gcggagcgtt tcggcttcgc
     1681 gttcgagggc attttccgcc agcacatgat ccagaagggc gagaaccgcg acacggcgtg
     1741 gttcgccatg ctcgacggcg actggccgcg gctcagggcc gagtacgagc gctggctcga
     1801 gccggccaat ttcgatgccg acggcgcgca gaagacgccg ttgcgcaccc ggccggcagg
     1861 ctagtcggcg agcatccgct cgatcgtccg gctcagcagc tcgagatcct gcggccggct
     1921 gaggcggtgg tcgccgtcgg gcaccagcgt cagcgtgacc ggatcgctca gcagatgctg
     1981 caccagcttc agcgcatgtt ccttgggcac gtcgcggtcg cgggcgccct gcaggatcgc
     2041 caccgggcag ccggtctcga tggcgcggcc gaacagcagg tgctggcggc cgtcctcgat
     2101 cagcgtccgg ttgatgcggt agggctcggc ggcatagtcg gacggggtgt cgatgaagcc
     2161 ctgccggtcg aggagcttcc ggtacttcgc cggcatctgg gccagcatca gctcggtcat
     2221 gtcggtcgcc ggggcgatca ggaccagccc gtggacgcgc ggcgcgccgc tccggcgcag
     2281 ctggcggagc agcagcagcg cgagccagcc gcccatcgag gagccgacga cgagctgcgg
     2341 gccggcggtg gtggcgaaca ccgcctcggc ctcctcgagc cagcggctga ccgttccgag
     2401 gttgaagtcg ccgcccgacc ggccgtggcc ggaatagtcg aagcgggtga cggcgaggcc
     2461 gtggctggcg ccgaaggcgt cgaccgtttc cgccttggcg ccgatcatgt cggatttgaa
     2521 gccgcccagc cagaacaggc ccggagtccg gcccggccgg cgcagcacgg caagctggcg
     2581 gtcgccgacc gctaaaatct cgggcacccg caggcctccg cacgcaactt cgccacagcc
     2641 tttggcattt gctttccggc gctgtccagc gcattgactt ctccgcgccg agtcacgatt
     2701 ttagcggcgc ttttccgccc ttcgtatcaa ccgcagaagg atttctgcca ttcgtcgacc
     2761 catgagaccc gttgcgcccc agaaggatgg gccgctctcg aacgaggata tccagtctcc
     2821 cgaagtccag ctgatcgatg ccgaaggcgt caacaagggg gccatcaaga cccgtgacgc
     2881 catcgcggag gcccaggaac tgggcctcga cctggtgatc attgccgcca attcgacgcc
     2941 gccggtcgcc aagatgctcg atctcgggcg cttcaaatac tcggcgcaga agaaggccgc
     3001 cgaggcgcgc aagaagcaga aggtgatcga ggtcaaggag atccagctcc gtcccaacat
     3061 cgacacccac gactacgaga ccaagatgaa ggcggtcagc cgcttcctcg aggacggcga
     3121 ccgggtgaag gtgacgatgc gcttccgcgg ccgcgagatg gcgcaccagg acatcggcat
     3181 gaacctgctg gtcaaggtgc agcaggagat ggaagcccgc gccaaggtcg aatcctcgcc
     3241 gcgctcggaa ggccggcaga tggtgatggt gctggcgccg aaatagcgcc gcggcgcaaa
     3301 tcggctgtga acaaggcggt ccgctgggcc gccttttgtt tttggtgacg atttgctgct
     3361 atataacgtc ttatgcaatt cgatcagcgg cagaccatcg ggtttcaggc agcacagctg
     3421 gcgcggctca tcgccaaccg gctgcgcgag gcgctggcgc cgctcgggct gatgccggca
     3481 caggtggcgg cgctgatcga gatcggccgg gccgaaggcc tgacgcagaa acagctggtc
     3541 gagcggctgg acgtcgagca gcccggcgtc gcccgcaccc tcaacgggct cgaagccgac
     3601 ggctggatcc tgcggcaggc gaagatcggg cgggcgcagg ggctgtacct gaccgaccgg
     3661 tcgcgggcgg ccctgcccga ggcggcgcgg cttgcggccg agatcaacgg gcaagcgctg
     3721 gcagagctga gccgcaccga gcaggcccac ttgcttgacc ggctggacga gctcatttcg
     3781 ggcctccgca cggcctgaag gcgcttgcgc cgggccggtc ttccctctat agacgccgct
     3841 tccaaccggg ccgcccggcc gaaaggcatg ccgtggcagt ccagaatgcg accgcccgca
     3901 agggcgaaaa ccaggtagca aaatgccaaa aatgaagacc aaatcgggcg ctaagaagcg
     3961 cttcaagatg accgcatccg gccgcgtcaa ggccggggtc gcgggcaaac gccaccgtct
     4021 ctccagccac aacgccgact acatccgccg ccaccgtggg accaagatcc tgcacaaggg
     4081 cgatgagagc ctggtcaagt ggtacatgcc ctacaaccgc taaggagagc gtgaaatgtc
     4141 ccgagtcaaa cgcggcgtta ccaaccacgc ccgccacaag aaagttctca aggccgccga
     4201 gggtttctac ggccgccgca agaacaccat ccgcgccgcc aaggccgccg tcgacaaggc
     4261 gggccagtat gcgtaccgcg atcgccgggc caagaagcgc aatttccgcg cgctctggat
     4321 ccagcgcatc aacgccgcgg tgcgcgagca cgggctgacc tatggccgat ttatcgacgg
     4381 cctcgtgaag gccgagatcg cggtcgaccg caaggtgctg tccgatatcg ccatcaccga
     4441 gcccgccgct ttcgctgcga tcgttgcgca gagcaagaag gcgctcggct atctcggcga
     4501 gatcgaacag accaccgccg agcgggtcag cgcctaagac tctcgccttt tccgaggcct
     4561 caagctaagc cttgcgccgc cccagacggg gatggcgcgg ggctttttgt ttgcccgcac
     4621 agatgtcgag actccgatga cccttgaagc cgagatcacc cgcctccgcg ccgaactcgg
     4681 cgccgccatc gccgccgctg cggatgacgg cgcgctcgaa gcggtgcgcg tcgcgtccct
     4741 gggcaagaag ggctcggtgt cggcgctgct ggcgatgctc ggcaacatgc ccgccgacga
     4801 gcgcaagagt gcgggcgccg ccatcaacgg gctgaagacg gcgatcaccg atctgctgga
     4861 gagcaagggc gccacgctgc gatccgccgg gctcgaggca cggctcaaag ccgagcgggt
     4921 cgacgtgacg ctgccggtcc ggccggcgcc gacgaccctg ggccgcatcc atccggtcag
     4981 ccaggtgtgg gacgagatca cggcgatctt ttccgacatg gggttcagga ttgccgaagg
     5041 gccggacatc gagaccgact ggtacaattt caccgcgctc aatttccccg aggggcaccc
     5101 ggcccgcgag atgcacgaca ccttcttcct cgagccgggg ccggacggaa cgcgcaaggt
     5161 gctgcgtacc cacacctcgc cggtgcagat ccgggtgatg aagcaggaca ccggcaagcc
     5221 ggcggcgccc tatctcaccg cgccgatggc gccgccgatc cgggtggtga tgcccggccg
     5281 cacctaccgg cacgacagcg accagacgca caccccgatg ttccaccagg tcgaggggct
     5341 ggtgatcgac aagagctcgc atatcggcca attgcgctgg gtgctgaccg agttcctcaa
     5401 ggcgttcttc gaggtcgagg gcgtgacgct gcggttccgg ccgagcttct tcccgttcac
     5461 cgaaccgtcg atggaagtcg acgtgcagtg cgaccgctcg ggcgccgaga tcaagatcgg
     5521 cgagggcagc gactggctcg agattctggg ctgcggcatg gtgcatccca acgtgctgcg
     5581 caattgcggg ctcgatccgg acgtctacca ggggtttgcc tggggcatgg ggatcgaccg
     5641 gctggcgatg ctgaagtacg ggatgccgga
//
LOCUS       DATAZA010000388         2588 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2139032, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000388 DATAZA010000000
VERSION     DATAZA010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2588
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2139032"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            193..678
                     /gene="lspA"
                     /locus_tag="VHZ56_09790"
     CDS             193..678
                     /gene="lspA"
                     /locus_tag="VHZ56_09790"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: protein motif:HMM:TIGR00077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HEX4298304.1"
                     /translation="MSRRGLWLSLALGFAAFALDRLHKYVQVDLMHWPEQHFVPVLPF
                     LDLGLVYNPGVSYGLLGALPVWAVAIVVGVALAALVVWWARSPSALVRAGLAICIGGA
                     LSNAADRLIYGAVADFFWLHIAGFSFFVFNLADAAITVGVCLLLLDLLGFGGRRAANA
                     A"
     gene            756..1358
                     /locus_tag="VHZ56_09795"
     CDS             756..1358
                     /locus_tag="VHZ56_09795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298305.1"
                     /translation="MAFDLIGRRSAALAAMLLVSVGLSACTTTEGTNAFTSFQTFDSE
                     VMEPTAQGLGLVPAPVKPDPTNPRGPLVLPKDTSVLPPPTTDVADAQLPADSDKAKVD
                     TTGLSAADIARLKAARVVDINTPDGRPLTKEELAKLTAKMKEVELNGKKSIFVPPEEY
                     FEVGSATKQDLVCLAADGDLVAVSDPKCPIEIRKALLKQT"
     gene            1474..>2588
                     /locus_tag="VHZ56_09800"
     CDS             1474..>2588
                     /locus_tag="VHZ56_09800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014891711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEX4298306.1"
                     /translation="MTDTPTVFAGDRLAKVIARAGLCSRRDAELWIKDGRVAVNGKVI
                     RTPAFNVTVKDAVKVDGQPLAARQGTRVWLYHKPTDLVVTEKDPEGRPTIFDTLESQG
                     LPRVVSIGRLDINTEGLLLLTNDGGLKRVLELPATGWLRRYRVRAFGTITQPQLDALK
                     DGLEVDGVQYGPIEAVLEREQGSNVWLLLSLREGKNREVKNVLAALGLKVNRLIRVSF
                     GPFQLGELPIGGVEVVRARVLREQLGKRLADEAGVDFDSELPEPAAIRLARGAANPAL
                     RAARPGAEPARQRKAMADRTERFRFTDRPDRGPRDLKDADRPPRKDRPGSRFPRQSGP
                     DRRDAPVDAGPPRKVFAPDGTETIFEAKTYGKKPRPAA"
BASE COUNT          385 a          998 c          814 g          391 t
ORIGIN      
        1 gttccggctc gacgacgtcc ccggcgtcgg cgtcgtcttc gccaaggccg aaggcgtccg
       61 ctgcgcccgc tcgtggaagt tcaccaccga tgtcggctcc gaccccggct accccgacct
      121 gagcgcccgc gacgcccggg ccatgcacga acgcaaggcc gccgggcttt gagcgccggc
      181 tcccggctcg ccatgtcccg ccgtggcctc tggctcagtc tcgccctcgg ctttgccgcc
      241 ttcgcgctcg accgcctgca caaatacgtg caggtcgacc tgatgcactg gcccgagcag
      301 catttcgtgc cagtgctgcc gttcctcgat ctcggactcg tctacaaccc cggcgtgtcc
      361 tacggcctgc tcggcgccct gccggtctgg gcggtggcga tcgtcgtcgg cgtggcgctg
      421 gcggcgctgg tcgtctggtg ggcccgctcg ccctcggcgc tggtgcgcgc cgggctcgcc
      481 atctgcatcg gcggcgccct ctccaacgcc gccgatcggc tgatctacgg cgccgtcgcc
      541 gatttcttct ggctgcacat cgccggcttt tcgttcttcg tcttcaatct cgccgacgcc
      601 gccatcaccg tcggggtgtg tcttctgctc ctcgatctgc tgggattcgg cggccgccgg
      661 gcggcaaacg ccgcgtgaac gaattaccgc cagaatctgg tcttaggcgg cacgctcggg
      721 tataagcctg cccgtcgggc tggaagggac gtttcatggc gtttgacttg atcgggcggc
      781 gcagcgcagc tttggccgcg atgctgctcg tctccgtggg gctgagcgcc tgcaccacca
      841 ccgaaggcac caacgccttc accagtttcc agacctttga ttcggaagtg atggagccca
      901 ccgcccaggg cctcgggctg gtgccggcgc cggttaagcc cgatccgacc aatccgcgcg
      961 gcccgctcgt cctgcccaag gacacctcgg tgctgccgcc gcccaccacc gacgtcgccg
     1021 atgcgcaact gcccgccgac agcgacaagg cgaaggtcga taccaccggc ctcagcgccg
     1081 ccgatatcgc ccgcctcaag gccgcccgcg tcgtcgacat caataccccg gacgggcgcc
     1141 cgctcaccaa ggaagagctc gccaagctga ccgccaagat gaaagaggtc gagctcaacg
     1201 gcaagaaatc gatcttcgtg ccgcccgaag agtatttcga ggtcggcagc gccaccaagc
     1261 aggatctcgt ctgcctcgcc gccgacggcg atctggtggc ggtcagcgat cccaaatgcc
     1321 cgatcgagat ccgcaaggcc ctgctgaagc agacctgagc cgcgatgccc cgggctgcgc
     1381 ttccgcagcc cacataagac gcaccggctg cgctcccgca gcccgcatga gatgcgccga
     1441 cccggccagt gcccggtccc gcaggagccg ccgatgaccg acacccccac cgtctttgcc
     1501 ggcgaccgcc tcgccaaggt cattgcccgc gccgggctct gctcgcgccg cgacgccgag
     1561 ctgtggatca aggacggccg cgtcgccgtc aacggcaagg tcatccgcac cccggccttc
     1621 aacgtcaccg tcaaggacgc cgtgaaggtt gatggccagc cgctcgccgc ccgccagggc
     1681 acccgcgtct ggctctacca caagcccacc gacctcgtgg tcaccgagaa ggaccccgag
     1741 ggccggccga cgattttcga caccctcgaa tcgcagggac tgccgcgcgt cgtctccatc
     1801 ggccggctcg acatcaacac cgagggcctg ctgctcctca ccaacgatgg cggcctcaag
     1861 cgcgtcctcg agctgcccgc caccggctgg ctgcgccgct accgcgtccg cgccttcggc
     1921 accatcaccc agccgcagct cgatgcgctg aaggatggtc tcgaggtcga tggcgtccag
     1981 tacgggccca tcgaagcggt gctcgagcgc gagcagggca gcaatgtctg gctgctgctg
     2041 tcgctgcgcg aaggcaagaa ccgcgaggtc aagaacgtcc tcgccgcgct cggcctcaag
     2101 gtcaaccgcc tgatccgcgt cagcttcggc ccattccagc tgggcgaact gccgatcggc
     2161 ggcgtcgagg tggtgcgcgc ccgggtgctg cgcgagcagc tgggcaagcg cctcgccgac
     2221 gaggccggcg tcgatttcga cagcgagctg cccgagcccg ccgccatccg gctcgcccgc
     2281 ggcgccgcca atccggcatt gcgcgccgcc cgccctgggg ctgagccggc caggcagcgc
     2341 aaggccatgg ccgaccgcac cgagcgtttc cgcttcaccg accggcccga ccgtggcccg
     2401 cgcgacctca aggatgccga tcggccgccc cgcaaggacc gccccggcag ccgcttcccg
     2461 cgccagtccg ggccggaccg ccgtgacgcg ccggtcgacg ccggcccgcc gcgcaaggtg
     2521 ttcgccccgg atggcaccga aaccatcttc gaggccaaga cctacggcaa gaagccgcgc
     2581 ccggccgc
//
LOCUS       DATAZA010000389         1609 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3301317, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000389 DATAZA010000000
VERSION     DATAZA010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3301317"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /locus_tag="VHZ56_09805"
     CDS             complement(<1..392)
                     /locus_tag="VHZ56_09805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298307.1"
                     /translation="MANLFAISPRQLIARAGFGVAAVFLFFGVATGALPVQCLATTGT
                     TFCPTPAGTVAPAARTVLVARPSAAATIHARWAPTVTAEPTISHNDLLASTFAVLKVD
                     LRSPAAVAAVTTPAVAGADDGTLTTRVV"
     gene            591..1025
                     /gene="arfB"
                     /locus_tag="VHZ56_09810"
     CDS             591..1025
                     /gene="arfB"
                     /locus_tag="VHZ56_09810"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome rescue aminoacyl-tRNA
                     hydrolase ArfB"
                     /protein_id="HEX4298308.1"
                     /translation="MTDNRLPITATLSLDPGELVLSFIRSSGPGGQNVNKVSSAAQLR
                     FDLMASPSLPAPLKARAAGLAGTRLTTEGVIVITADRFRSQPLNRDDAIARLLELLRQ
                     AAVPPRPRRATRPTLASKQRRLAGKTQRGGVKRLRTEKPGLD"
     gene            complement(1035..>1609)
                     /locus_tag="VHZ56_09815"
     CDS             complement(1035..>1609)
                     /locus_tag="VHZ56_09815"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HEX4298309.1"
                     /translation="VRPDVVGFAVSAGATVINAVWALLLGRVGGREKSASLVADSRHL
                     WGDVVSTVVVIVGVLLAIWTGVQRIDAGLAGLVGLGVLWSGWLTIRESVIGLMDVSVE
                     PGKLAAIKEIIASNAAGAIEAHDIRTRQSGRFTFIEFHLVVAGAMSVEDAHGICDRIE
                     AKLRERVGEAQITIHVEPEEKAKHSGIVVI"
BASE COUNT          245 a          637 c          481 g          246 t
ORIGIN      
        1 ttcaccactc gtgtcgtcag tgtgccgtca tccgcgccgg ccactgccgg cgtcgtgacg
       61 gcggccacgg ccgccgggct cctgaggtcg accttcagca ccgcgaaggt cgaggccagc
      121 agatcgttgt ggctgatcgt cggctccgcc gtcactgtgg gggcccagcg cgcgtggatc
      181 gtcgccgcgg ccgatggccg tgccaccagc accgttcgtg ccgctggcgc caccgtcccg
      241 gctggcgttg gacagaatgt cgttccagtt gtggccaggc actgcaccgg cagcgcgccg
      301 gtcgcaactc cgaagaacag gaacaccgcg gcaacgccga atccggcgcg agcgatcagc
      361 tggcgaggcg atatcgcaaa gagattggcc aattagtcta ctcctggtga tccggccgct
      421 cgcctcagcc ggtacgcacc ccctcaccat gccgtgaacc ttcgaacctg aatcggactc
      481 aaatgtggcc gcgctaaact tgcggaaatt cgcgcggcct gcttcgcctc atcgccgctg
      541 attcgttttg cgtcatcggc tacactgccg ccatcgcccg cgaggatgcc gtgaccgaca
      601 atcgcctgcc catcaccgcc acgctgtcgc tcgatccggg cgagctcgtg ctgagcttca
      661 tccgttcctc cggtcccggc ggccagaacg tcaacaaggt ctcgagtgcg gcgcagctgc
      721 gcttcgatct catggcctcg ccgtcgctgc ctgctccgct caaggcgcgg gccgccggcc
      781 tcgccggcac ccggctcacc accgagggcg tcatcgtcat caccgccgac cgcttccgct
      841 cccagccgct caaccgcgac gacgccatcg cccggctgct cgagctgctg cgccaggccg
      901 ccgtcccgcc gaggccgcgc cgcgccaccc gcccgacgct cgccagcaag cagcggcgcc
      961 tcgccggcaa gacccagcgc ggcggcgtca agcgcctgcg gacggaaaag cccggcctcg
     1021 attgaggccg cggcctagat caccacgatg ccggaatgct tggccttttc ctcgggctcg
     1081 acgtggatgg tgatctgcgc ctcgcccacc cgctcgcgca gcttcgcctc gatccggtcg
     1141 cagatgccgt gcgcgtcctc gacgctcatc gcccccgcca ccaccaggtg gaactcgatg
     1201 aaggtgaagc gcccggactg ccgcgtgcgg atgtcgtgcg cctcgatggc gcccgccgca
     1261 ttgctcgcga tgatctcctt gatcgccgcc agcttccccg gctcgaccga cacgtccatc
     1321 agcccgatga cgctctcgcg gatggtcagc catcccgacc acagcacccc gagcccgacc
     1381 agcccggcga gcccggcatc gatccgctgc acgcccgtcc agatcgccag cagcacgccg
     1441 acgatcacca ccaccgtcga caccacgtcg ccccacaggt gccggctgtc ggcgaccagc
     1501 gatgccgatt tctcccgtcc cccgactcgg ccgagcagca gcgcccacac cgcgttgatc
     1561 accgtggcgc cggccgagac ggcaaagccc acgacgtccg gccgcacct
//
LOCUS       DATAZA010000390         3548 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2256826, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000390 DATAZA010000000
VERSION     DATAZA010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3548
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2256826"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..730
                     /gene="sigJ"
                     /locus_tag="VHZ56_09820"
     CDS             <1..730
                     /gene="sigJ"
                     /locus_tag="VHZ56_09820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003527909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RNA polymerase sigma factor SigJ"
                     /protein_id="HEX4298310.1"
                     /translation="RAAVEVPEAYLVRVVTRLCLDALKSARRRRETYVGPWLPEPVVE
                     ADDAADGDVTLPLLLALERLSPLERAAFLLHDVFGMPFEEVAGAIGRDAAATRQLATR
                     ARRHVHEDRPRFDLDRQHGLALAEAFHAASLGGDLAELRAMLAEDVVLTSDGGGKRPA
                     GQVPLSGRETVVAFLHKLAEVFHVRPGEVLRYARINGLPGYVTLEADGVLQTTALDIR
                     DGRIAAIYVMRNPDKLRHLEASLH"
     gene            828..1124
                     /locus_tag="VHZ56_09825"
     CDS             828..1124
                     /locus_tag="VHZ56_09825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEX4298311.1"
                     /translation="MIYALLTTLSLILNLVWWVFLIMIIMSWLISFGVINTRNQLVAG
                     VWRALNQITDPILRPIRRIIPPMGGLDLSPIVVFVIIFFLQQFIANFAVTGRVL"
     gene            1130..1552
                     /locus_tag="VHZ56_09830"
     CDS             1130..1552
                     /locus_tag="VHZ56_09830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298312.1"
                     /translation="MATPARPPQSDRQRRAYFDAFGARFPELSLRWGNTFSRWRSVPG
                     TELVLAYYITNHSVGVFVRGERGIPCRDTAAALPVFSLETGLGVPLGNADFPFVSAYR
                     FDPFHQRAWPKSHDWLQATGAHYVATLAAIVGGLTEAD"
     gene            1698..>3548
                     /locus_tag="VHZ56_09835"
     CDS             1698..>3548
                     /locus_tag="VHZ56_09835"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017486335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="HEX4298313.1"
                     /translation="MIPTYLLWAIVIAGLLSIVYGIVTTRGLLAADAGSARMQEISAA
                     VREGASAYLRRQYTTIAIVGVVIFILAFWLLGVYAAIGFLIGAVLSGAAGFIGMNVSV
                     RANVRVAQAATKSLAGGLDLAFKSGAVTGLLVAGLGLLGVTIYFAVLTQVIHLEPTSR
                     TVIDALVATSFGASLISIFARLGGGIFTKGADVGGDMVGKVEAGIPEDDPRNPATIAD
                     NVGDNVGDCAGMAADLFETYVVTTVATMVLAAIVLPDAYKLAGMVLPLAIGGACVITS
                     IIGTYFVRMGASQNIMNALYKGVGATGVLSLIVLPLMLWWVFGDLNAPIGTAAKAFTP
                     WSLFWCGVVGLVITGLIIVITEYYTGTGRRPVKSIAEASVTGHGTNVIQGLAVSLEAT
                     ALPALVIIAGIIVAYNLAGLFGIAFAVTTMLALAGMIVALDAFGPVTDNAGGIAEMSG
                     LDKAVRHNTDALDAVGNTTKAVTKGYAIGSAGLGALVLFAAYTQDLNFFSAKAPAGSI
                     LAGGANLTFSLADPYVIVGLLFGGLLPFLFGGMSMTAVGRAAQSVVIEVRRQFKENPG
                     IMAGTSKPDYAKAVDLLTRSAIREMIVPSLLPVLSPIVVFVVIYWVAGAAS"
BASE COUNT          482 a         1252 c         1198 g          616 t
ORIGIN      
        1 ccgggcggcg gtcgaggtac cggaggccta tctggtgcgg gtggtgaccc ggctctgcct
       61 cgatgcgctc aaatcggcgc gccgtcgccg cgagacctat gtcgggccgt ggctgcccga
      121 gccggtggtc gaggccgacg acgcggcgga cggcgacgtc acgctgccgc tgctgctggc
      181 actggagcgg ctgtcgccgc tggagcgcgc cgcgttcctc ctccacgatg tgttcggcat
      241 gccgttcgag gaggtcgccg gggccatcgg gcgggacgcg gccgcgacgc ggcagctggc
      301 cacccgggcg cggcggcacg tgcacgagga ccggccgcgc ttcgacctcg accgccagca
      361 cgggctggcg ctggccgagg ccttccacgc cgcctcgctc ggcggcgacc tggcggagtt
      421 gcgggcgatg ctggccgagg acgtggtgct caccagcgac ggcggcggca agcgcccggc
      481 cggccaggtg ccgctcagcg gccgcgagac ggtggtcgcg ttcctccaca agctggcgga
      541 agtgttccac gtccggcccg gcgaggtgct gcgctatgcc cggatcaacg ggctgccggg
      601 atatgtgacg ctcgaggccg acggcgtgct gcagaccacc gcgctcgaca tccgcgacgg
      661 ccggatcgcc gcgatctacg tgatgcgcaa tcccgacaag ctccggcacc tcgaggccag
      721 cctccactga ggccggcggc aggcgccgtt caccgtgccg ggccggccgc cttgcgagcg
      781 accggcacaa cccctagata tcgcgcatcc gatcctgggg cgcccacatg atctatgcct
      841 tgctgaccac gctcagcctg atcctcaacc tggtctggtg ggtgttcctg atcatgatca
      901 tcatgagctg gctcatcagc ttcggggtga tcaacacccg caaccagctg gtggcgggcg
      961 tctggcgggc gctgaaccag atcaccgacc cgatcctcag gccgatccgc cgcatcatcc
     1021 cgccgatggg cgggctcgat ctcagcccca tcgtggtgtt cgtcatcatc ttcttcctgc
     1081 agcagttcat cgccaatttc gcggtcaccg gccgggtgct ctgagccgga tggcgacgcc
     1141 ggcgcggccg ccgcagtcgg accgccagcg gcgcgcctat ttcgacgcct tcggcgcccg
     1201 gttcccggag ctgagcctgc gctggggcaa cacgttttcg cgctggcgca gcgtgccggg
     1261 caccgagctg gtgctggcct attacatcac caaccactcg gtcggcgtgt tcgtgcgcgg
     1321 cgagcgcggc attccgtgcc gcgacacggc ggcggcgctg ccggtgtttt cgctggagac
     1381 ggggctcggc gtgccgctgg gaaatgccga tttcccgttc gtttcggcct accggttcga
     1441 cccgttccac cagcgggcct ggccgaaaag ccacgactgg ctgcaggcga ccggcgcgca
     1501 ctatgtggcg acgctggcgg cgatcgtcgg cgggctcacc gaggccgact gaaaaacccc
     1561 ggcaaatcgg gagtttcccg gagaatcggg ttgcttcgac cgtcacattt tggcagaagc
     1621 caagccacaa tccgccgggc ggggggttgt cctttgcgtt tgcgcttgga cccggcggtc
     1681 accgcaagag ggactttatg attccgacct atcttctctg ggcgatcgtc atcgccggcc
     1741 tgctgtcgat cgtctacggc atcgtgacga cgcgcggcct cctggctgcc gacgccggca
     1801 gcgcccgcat gcaggaaatc tcggcggccg tgcgcgaggg cgcctcggcg tatctgcgcc
     1861 ggcagtacac caccatcgcc atcgtcggcg tggtgatctt catcctcgcc ttctggctgc
     1921 tcggcgtcta cgccgccatc ggcttcctca tcggcgcggt gctctcgggc gccgccggct
     1981 tcatcggcat gaacgtctcg gtgcgggcca atgtccgcgt cgcgcaggcg gcgaccaagt
     2041 cgctggccgg cgggctcgac ctcgcgttca agtcgggggc ggtcacgggc ctgctggtcg
     2101 ccggcctcgg gctgctcggc gtcaccatct atttcgccgt cctcacccag gtcatccatc
     2161 tcgagccgac cagccgcacc gtcatcgacg cgctggtggc gacttcgttc ggcgcctcgc
     2221 tgatctcgat cttcgcgcgt ctgggcggcg gcatcttcac caagggcgcc gacgtcggcg
     2281 gcgacatggt gggcaaggtc gaagccggca tcccggagga cgatccgcgc aacccggcga
     2341 ccatcgccga caatgtgggc gacaatgtcg gcgactgcgc cggcatggcg gccgacctgt
     2401 tcgagaccta cgtggtgacc accgtcgcca ccatggtgct ggcggcgatc gtgttgcccg
     2461 atgcctacaa gctcgccggc atggtgctgc cgctcgccat cggcggcgcc tgcgtcatca
     2521 cctcgatcat cggcacgtat ttcgtgcgca tgggggccag ccagaacatc atgaacgccc
     2581 tctacaaggg cgtcggcgcc acgggcgtgt tgtcgctgat cgtgctgccg ctgatgctgt
     2641 ggtgggtgtt cggcgacctc aacgcgccga tcggcaccgc cgccaaggcg ttcacgccgt
     2701 ggagcctgtt ctggtgcggc gtcgtcggcc tcgtcatcac cggcctcatc atcgtcatca
     2761 ccgaatacta caccggcacc ggccggcgcc cggtgaagtc gatcgccgag gcctcggtca
     2821 ccggccacgg caccaacgtc atccagggcc tcgccgtgtc gctcgaagcc acggcgctgc
     2881 cggcgctggt gatcatcgcc ggcatcatcg tcgcctacaa cctcgcgggc ctgttcggca
     2941 tcgcgttcgc cgtcaccacc atgctggcgc tggccggcat gatcgtcgcg ctcgatgcct
     3001 tcggcccggt caccgacaat gccggcggca tcgccgagat gagcggcctc gacaaggcgg
     3061 tgcgccacaa caccgatgcg ctcgatgcgg tgggcaacac caccaaggcg gtcaccaagg
     3121 gctacgccat cggttcggcg ggcctcggcg cgctggtgct gttcgccgcc tacacgcagg
     3181 atctcaactt cttttcggcc aaggcgccgg cggggtcgat cctggcgggt ggcgccaacc
     3241 tcaccttctc gctggccgac ccttacgtga tcgtcggcct gctgttcggc ggcctgctgc
     3301 cgttcctctt cggcggcatg tcgatgaccg ccgtcggacg cgccgcgcag agcgtcgtga
     3361 tcgaggtgcg ccggcagttc aaggagaacc ccggcatcat ggccggcacc tccaagcccg
     3421 actatgccaa ggcggtcgac ctgctgaccc gctcggccat ccgcgaaatg atcgtgccgt
     3481 cgctgctgcc ggtgctgtcg ccgatcgtgg tgttcgtggt gatctactgg gtggcgggcg
     3541 ccgcctcg
//
LOCUS       DATAZA010000391         2537 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1444131, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000391 DATAZA010000000
VERSION     DATAZA010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2537
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1444131"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..528
                     /locus_tag="VHZ56_09840"
     CDS             <1..528
                     /locus_tag="VHZ56_09840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298314.1"
                     /translation="DGVRDIPDVALFASDGSAWTHNYATCYTDRAGGGGPCTGNPAAW
                     SGNAGGTSYATPIMAAIQALVDQYVGDRQGNPLATYYALAKAEYGTKGNANCSADKGN
                     AIGAGCIFHDIVSGDMAQDCKGNVDCYRPSGTYGVLSSSNTVYKPAYKATVGYDFATG
                     LGSVNGYNLARNWPK"
     gene            complement(532..1272)
                     /gene="phoB"
                     /locus_tag="VHZ56_09845"
     CDS             complement(532..1272)
                     /gene="phoB"
                     /locus_tag="VHZ56_09845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon transcriptional regulator
                     PhoB"
                     /protein_id="HEX4298315.1"
                     /translation="MSAKQTVLVVEDEAHIATMLRYNLEKAGYGVVEVASGDEALHQI
                     AEVKPEAVLLDWGLPGVSGYELCRQIRASAEHRTLPVIMLTARGDEVDKVRALDNGAD
                     DYVTKPFKVGELIARLKAVMRRARPGAAETVLAFAGIRMDTATHRVTRGERAVHLGPT
                     EYRLLRFFLERPRRVFSREQLLDAVWGYNIYVETRTVDVHIRRLRTAINANNEPDLIR
                     TVRSAGYALEEPQHAKAPRQKKPQADAA"
     gene            complement(1284..>2537)
                     /locus_tag="VHZ56_09850"
     CDS             complement(1284..>2537)
                     /locus_tag="VHZ56_09850"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4298316.1"
                     /translation="NGALLMNDGLYARDLLTEDEVWIGSSPSGLGRAAFRLPGPVLPP
                     APFTGLEGDAHLIRALRERLRDAESELGSANAILALHPEPILVIDAARAILRGNAAAR
                     TLFHGDADGRGAEAVLDHKDVVQAAARVFAGAGRQVVDVKLANIGGGAMERHLRAQIE
                     LLPDYTPAKPTALLTITDLTEVRRAEQLRADFVANASHELRTPLAVLLGFIETLTGPA
                     ADDPAAQREFLGIMQQQATRMARLVDDLLSLSKIELTEHAAPTRRVRLADVVGPIARA
                     LDLRAAERGMAITLTAAADLPEVPGEPDELAQVAQNLIDNAIKYARPDSEITVTVGPS
                     PRFAGGVMLRVRDRGEGIARKHLSRLTERFYRVDKARSSRMAGTGLGLAIVKHVVNRH
                     NGLLEIESKVGRGSRFTMHLPGSPC"
BASE COUNT          389 a          856 c          881 g          411 t
ORIGIN      
        1 gacggtgtgc gcgacattcc ggatgtggcc ctgttcgcct cggacggcag cgcttggacc
       61 cataactatg ccacctgcta caccgaccgg gcgggcggcg gggggccttg caccggcaac
      121 ccggcggcct ggagcggcaa cgccggcggc acgtcgtacg cgacgccgat catggcggcc
      181 atccaggcgc tggtcgatca atatgtcggc gaccgtcaag gcaacccgct ggcgacatat
      241 tacgcgctgg cgaaggccga atacgggacg aaggggaatg caaattgctc ggcggacaag
      301 ggcaacgcca tcggcgccgg ctgcatcttc catgacatcg tgtcgggcga catggcccag
      361 gattgcaagg gcaatgtcga ttgctaccgc ccgtcgggca cttacggcgt gctgtcgagc
      421 tcgaacacgg tctacaagcc cgcctacaag gccaccgtcg gctatgattt cgccaccggg
      481 ctcggcagcg tcaacggcta taacctggcg aggaactggc cgaaataggc gctaagcggc
      541 atccgcctgc ggcttcttct gccgcggcgc cttggcgtgc tggggttctt cgagggcata
      601 tcctgcggac cttacggtcc tgatgaggtc tggttcgttg tttgcgttga tagcggtcct
      661 gaggcgtcgg atatggacgt cgacggtcct tgtctcgaca tagatgttgt atccccagac
      721 ggcgtcgagg agctgctctc gtgagaagac gcggcgtggg cgttcgagga agaagcgcag
      781 caggcggtat tcggtcgggc ccagatggac ggcgcgctcg ccgcgggtga cgcggtgggt
      841 ggcggtgtcc atgcggatgc cggcgaaggc gagcaccgtc tcggccgcgc ccggcctggc
      901 gcggcgcatc accgccttca gccgcgcgat cagctcgccc accttgaacg gcttggtcac
      961 atagtcgtcg gcgccgttgt cgagcgcgcg gaccttgtcg acctcgtcgc cgcgtgcggt
     1021 cagcatgatc accggcaggg tgcggtgctc ggccgaggcg cggatctgcc ggcagagctc
     1081 gtagccggac acgcccggca gcccccagtc gagcagcacc gcctcgggct tcacctcggc
     1141 gatctggtgc agggcctcgt cgccgctggc gacctcgacc acgccgtacc cggccttctc
     1201 caggttgtag cgcagcatgg tggcaatatg ggcctcgtcc tcgaccacga gaacggtctg
     1261 cttggcgctc atcgaacctg ccttcagcac gggctgcccg gaagatgcat ggtgaacctg
     1321 gagccgcggc cgaccttgct ctcgatctcc aagaggccgt tatggcggtt gaccacatgc
     1381 ttgacgatgg ccagccccag cccggtgccg gccatgcgcg acgagcgcgc cttgtcgacc
     1441 cggtagaagc gctcggtgag ccgcgagaga tgcttcctgg cgatcccctc gccgcggtcg
     1501 cgcaccctca gcatcacccc gccggcaaac cggggcgagg ggccgacggt gacggtgatc
     1561 tcgctgtcgg gccgtgcata cttgatcgca ttgtcgatca ggttctgcgc cacctgcgcc
     1621 agctcgtcgg gctcgcccgg cacttcgggc agatcggcgg cggcggtgag cgtgatcgcc
     1681 atgccgcgct cggcggcgcg caggtccagc gcccttgcga tcggccccac cacatcggcc
     1741 agccgcacgc gccgggtcgg ggccgcatgt tcggtgagct cgatcttcga cagcgacagc
     1801 aggtcgtcga ccagcctggc catgcgggtg gcctgctgct gcatgatgcc gaggaactcg
     1861 cgctgggcgg ccggatcgtc ggcggccggt ccggtcaggg tctcgatgaa gcccagcagc
     1921 accgccagcg gcgtgcgcag ctcgtgggat gcattggcga cgaagtccgc gcgcagctgc
     1981 tcggcccgcc tgacctcggt gaggtcggtg atggtgagca gcgcggtggg cttggccggc
     2041 gtatagtccg gcagcagctc gatctgggcg cgcagatggc gctccatggc gcccccgccg
     2101 atattggcca gcttgacgtc gaccacctgc cggccggcgc cggcgaacac ccgggccgcc
     2161 gcctggacga catccttgtg gtcgagcacg gcctcggcgc cgcggccgtc ggcgtcgccg
     2221 tggaacaggg tccgggcggc ggcgttgccg cgcaggatgg cgcgggcggc atcgatcacc
     2281 aggatcggct cgggatgcag cgccaggatg gcgttggcgc tgcccagctc cgactccgcg
     2341 tccctcaacc gctcgcgcag ggcacggatc aggtgcgcgt cgccctccag ccccgtgaac
     2401 ggcgcaggcg gcagaaccgg gccaggcaga cgaaacgccg cacgccccag tccagacggc
     2461 gaggacccaa tccagacctc gtcctccgtc agcaaatctc gcgcatatag gccgtcattc
     2521 atcaataacg caccgtt
//
LOCUS       DATAZA010000392         4522 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_51030, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000392 DATAZA010000000
VERSION     DATAZA010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4522
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51030"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            26..679
                     /locus_tag="VHZ56_09855"
     CDS             26..679
                     /locus_tag="VHZ56_09855"
                     /inference="COORDINATES: protein motif:HMM:NF025049.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEX4298317.1"
                     /translation="MTDLTPSRRHVLKWTGVAATLAIAGSVLPNFGISAALAADLGSG
                     DIGVLNYAYALEQLEAAFYTQAVKTPYSGITKAELATLHAIRDHEIAHREFLRKALGK
                     KAIPNLEVDFSKIDFTSRSSVLGTADVFENLGVAAYNGAGQLIKTVAYLAAAGSIVSV
                     EARHCAAIAELLHGAGRDAAGGSHVDFKGLDEALSPKEVLPKAAPFIKTPVTANSLA"
     gene            691..1350
                     /locus_tag="VHZ56_09860"
     CDS             691..1350
                     /locus_tag="VHZ56_09860"
                     /inference="COORDINATES: protein motif:HMM:NF025049.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEX4298318.1"
                     /translation="MDTQNDFILDGVDPDLAERIDVGRRSLFSRYAPVLALGSAPLVL
                     AAASSEAFAAGGLPQAVVDVLNFALTLEYLEAAFYTKGNLSLNLIPQEYKLLFATIGA
                     HEVAHVALLRSALGAAAVEAPKVDFTAGGKYADVFSNFKTFATLSATFEDLGVAAYKG
                     QAGNLAGTPVLTTALQIHSVEARHASAVRPLIGKAGYDGAFDKPKTKAQVLAAAKPFL
                     A"
     gene            complement(1410..2711)
                     /locus_tag="VHZ56_09865"
     CDS             complement(1410..2711)
                     /locus_tag="VHZ56_09865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006163087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4298319.1"
                     /translation="MPTDRLAALLARRGIHYGWIVAGTTFLVMLATAAAMGSAGVLMQ
                     PLQQEFGWTTEQVSSAFAVRLVFFGLLGPFAAAFMNHFGIRKVVTAALVLIGAGVAAS
                     LFMTQLWQLMVLWGIVIGVGTGMTALVLGATVASRWFDKRRGLVVGMMTASNATGQLI
                     FLPLLAALAQNIGWRAALTFVLVILAVAFVLAAIFLRDHPADMGLPVYGRTTITPVPP
                     RSRRLVELLTTPLLTLREAARTQVFWVLFATFFVCGFSTNGLIQQHWISICGDVGITP
                     TGAAGYLALIGAFDFVGTILSGWLSDRYDNRYLLLAYYGFRGLSLLYLPFSGFSLWTL
                     TAFAVFYGLDWVATVPPTVKLTAQRFGAEKAGLVFGWVFAGHQLGAASAAFLAGAVRT
                     GTSSYMPAIFLAGFFCLLAALLILTISKPVRVAPATAAATA"
     gene            complement(2735..3133)
                     /locus_tag="VHZ56_09870"
     CDS             complement(2735..3133)
                     /locus_tag="VHZ56_09870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010659579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HEX4298320.1"
                     /translation="MDDPCICISLRQASRRLTALYDAALLPAGLNLAQYSLLRNIDRH
                     APVSLTRLGEVVELDRSTLGRNARVLERLGLVAMGTGRDAREAGVRLTEAGQASLQRS
                     IPLWSAAQADIRGRLGGTGVAQLETLLGAL"
     gene            3213..4031
                     /locus_tag="VHZ56_09875"
     CDS             3213..4031
                     /locus_tag="VHZ56_09875"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX4298321.1"
                     /translation="MQMSPLGWLDALVPKDSASRQIATAVRYGPDPRHLLDLYAPTRG
                     RNWPLMVFVYGGGWEGGSRSDYHFAGRALAALGLLTAVVDYRVYPQVHFPAFVDDVGR
                     AAHWLGANAAAEGGDPGRVVLAGHSSGAYNVVMLALQPERFGAPELAGRIAGVVGLAG
                     PYDFYPFDVRQAINAFGRAPEPRLTQPVNLVTPAAPPMLLAHGIADTICGDYHTVRLA
                     QKLREAGVGVVERHYAGLGHEPLVLGLMRPFRRLWPVYGDVAQFLRERAVSPPP"
     gene            4098..>4522
                     /locus_tag="VHZ56_09880"
     CDS             4098..>4522
                     /locus_tag="VHZ56_09880"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4298322.1"
                     /translation="MAEAATTRSWMIPVWGLFVAAFAVATAELIIAGLLPNVAADLNV
                     DIPTAGLLITGYALGVAIIGPILALVTATLPRRALLLGLVAIFVVGNCICAVSASYWM
                     LLGARLVIACCHGLFFGVAIVMASRLAPDGRQTSAISVVV"
BASE COUNT          722 a         1527 c         1610 g          663 t
ORIGIN      
        1 acagtgcacc cacggagcaa ccaccatgac agacttgacc cccagccgcc gccacgtcct
       61 caaatggacc ggcgtcgcgg ccacgctcgc catcgccggc agcgtgctgc cgaatttcgg
      121 catttccgcc gcgctcgccg cggatctcgg ctcgggcgac atcggcgtgc tcaactatgc
      181 ctatgcgctc gagcagctcg aggcggcctt ctacacgcag gcggtgaaga cgccctactc
      241 gggcatcacc aaggccgaac tggcgacact gcatgccatc cgcgaccacg agatcgcgca
      301 ccgcgagttc ctgcgcaagg cgctcggcaa gaaggcgatc cccaacctcg aggtcgactt
      361 ctcgaagatc gatttcacca gcaggtcgag cgtgctgggc acggcggacg tgttcgagaa
      421 cctcggcgtc gccgcctaca acggcgccgg ccagctgatc aagacggtgg cctacctcgc
      481 tgcggcggga agcatcgtgt cggtcgaggc ccgccattgc gccgccatcg ccgaactgct
      541 gcacggcgcc ggccgcgatg cggcgggcgg ctcgcacgtc gacttcaagg gcctcgacga
      601 ggcgctgtcg ccgaaagagg tgctgccgaa ggcggcgccc ttcatcaaga cccccgtcac
      661 cgccaattcg ctggcttgag gagatatcac atggatacgc agaacgattt catcctcgac
      721 ggcgtcgatc ccgatctcgc cgaacgcatc gatgtgggca ggcgcagcct gttctcgcgc
      781 tacgcgccgg tgctggccct gggcagcgcg ccgctggtgc tggcggcggc gtcgagcgaa
      841 gcatttgcgg ccggcggcct gccgcaggcg gtggtcgacg tgctcaactt cgcgctgacg
      901 ctcgaatatc tcgaagcggc gttctacacc aagggcaatc tgtcgctgaa cctgatcccg
      961 caggaataca agctgctgtt cgccaccatc ggcgcgcacg aagtggcgca cgtggcgctg
     1021 ctgcgttcgg cgcttggggc agcggcggtc gaggcgccga aggtcgactt cacggccggc
     1081 ggcaagtacg ccgacgtgtt ctcgaacttc aagaccttcg ccacgctctc ggcgacgttc
     1141 gaggacctcg gggtcgcggc ctacaagggc caggccggca acctcgccgg caccccggtg
     1201 ctgaccacgg cgctgcagat ccactcggtc gaggcccgcc atgcctcggc ggtgcggccg
     1261 ttgatcggca aggcgggcta tgacggcgcc ttcgacaagc ccaagaccaa ggcgcaggtg
     1321 ctcgccgcgg caaagccgtt cctcgcctga ttttctcggg acaggcaggc tccagggccg
     1381 tcgcctcgca agaggcggcg gccttgtcgt caggcggtgg cggcggccgt ggcgggggcg
     1441 acgcggaccg gcttgctgat ggtgaggatc agcagcgccg ccagcaggca gaagaagccg
     1501 gcgaggaaga tcgccggcat gtaggacgac gttccggtgc gcaccgcgcc ggcgaggaag
     1561 gcggcggaag cggcgcccag ctggtggccg gcgaagaccc agccgaagac cagcccggcc
     1621 ttctcggcgc cgaagcgctg ggcggtgagc ttcaccgtcg gcggcacggt cgccacccag
     1681 tcgaggccgt agaacacggc gaaggcggtc agcgtccaca gcgagaagcc ggagaacggc
     1741 agatagagca ggctcaggcc gcggaagccg taataggcga gcagcagata gcggttgtcg
     1801 tagcggtcgg agagccagcc cgaaaggatg gtgccgacga agtcgaaggc gccgatcagc
     1861 gcgaggtagc cggccgcccc ggtcggggtg atgccgacat cgccgcagat cgagatccag
     1921 tgctgctgga tcagcccgtt ggtcgaaaag ccgcagacga agaaggtggc gaacagcacc
     1981 cagaacacct gcgtcctggc ggcctcgcgc agcgtcagca gcggcgtggt gagcagttcc
     2041 acgagccgcc tgctgcgggg cggcaccggg gtgatcgtcg tgcggccata gaccggcagg
     2101 cccatgtcgg cgggatggtc gcggaggaag atcgcggcga ggacgaaggc gacggcgagg
     2161 atcaccagca cgaaggtcag ggcggcgcgc cagccgatgt tctgcgccag cgccgcgagc
     2221 agcggcagga agatcagctg gccggtggcg ttggaggcgg tcatcatgcc gacgacgagg
     2281 ccgcggcgct tgtcgaacca gcggctggcg acggtggcgc ccagcaccag cgcggtcatg
     2341 ccggtgccga cgccgatgac gatgccccac agcaccatca gctgccagag ctgggtcatg
     2401 aagagcgagg cggcgacgcc ggcgccgatc agcaccaggg cggcggtcac caccttgcgg
     2461 atgccgaaat ggttcatgaa ggcagcggcg aacgggccga gcaggccgaa gaagacaagg
     2521 cgcacggcga aggcggaaga cacctgctcg gtggtccagc cgaactcctg ctgcagcggc
     2581 tgcatcagca cgccggccga gcccatcgcg gcggccgtgg cgagcatcac gaggaaggta
     2641 gtgccggcga cgatccagcc atagtggatg ccgcgccgcg ccagcagggc cgccagccgg
     2701 tcggtcggca cggtcggtgc catccccgtt tccatcacaa tgctcccagc agggtttcga
     2761 gctgcgcgac gccggtgcca cccaggcggc cacggatatc ggcctgcgcg gcgctccaca
     2821 gcgggatgct cctttgcagg ctcgcctgtc cagcctcggt gaggcggacg ccggcttcgc
     2881 gcgcatcgcg cccggtgccc atcgccacca gccccaggcg ctcgagcacg cgcgcgttgc
     2941 ggccgagggt cgagcggtcg agctcgacga cttcgcccag ccgggtcagc gacaccgggg
     3001 cgtgccggtc gatgttccgc agcagcgagt actgcgcgag gttgaggccg gcgggcagca
     3061 gcgccgcgtc gtagagcgcg gtcagccggc gactcgcctg gcgcagcgaa atgcagatgc
     3121 agggatcgtc catggattgt gggcatatac ccgcaataaa tgaaacacaa gccggtccac
     3181 ttgcgtagct atctgctgat aaaggaccgc cgatgcagat gtctccgctt ggctggctcg
     3241 atgcgctcgt ccccaaggac agcgccagcc ggcagatcgc caccgccgtg cgctatggcc
     3301 ccgatccccg tcacctgctc gacctctacg ccccgacccg cggccgaaac tggccgctga
     3361 tggtgtttgt ctatggcggc ggctgggagg gcggcagccg cagcgactac catttcgccg
     3421 gccgggcgct ggcggcgctg gggctgctga ccgcggtggt cgactaccgg gtgtatccgc
     3481 aggtgcattt tccggccttc gtcgacgatg tcgggcgcgc cgcgcactgg ctgggcgcca
     3541 acgcggcggc agagggcggc gaccccggcc gggtggtgct cgcggggcac tcgtcggggg
     3601 cctacaacgt cgtcatgctg gcgctgcagc cggagcggtt cggggcgccg gagctggcag
     3661 gccggatcgc cggcgtcgtc gggctggcgg ggccctacga tttctatccg ttcgacgtgc
     3721 ggcaggcgat caacgccttc ggccgggcgc ctgagccgcg gctgacgcag ccggtcaacc
     3781 tggtgacgcc ggccgccccg ccgatgctgc tggcgcacgg gatcgccgac accatctgcg
     3841 gcgactacca cacggtgcgg ctggcgcaaa agctcaggga ggccggggtg ggcgtggtcg
     3901 agcggcacta tgccggcctc gggcacgaac cgctggtcct ggggctgatg cggccgttcc
     3961 ggcggctctg gccggtctat ggcgatgtgg cgcagttcct gcgcgaacgg gcggtttccc
     4021 cgcccccgtg acgccgctcc ggtgacaaga gccggcggat ttcgctatgc tcgcgacggc
     4081 acatcgaggg ggctgcaatg gccgaggccg cgacgacgcg cagctggatg attccggtct
     4141 ggggcctgtt cgtcgcggct ttcgcggtgg cgacggccga gctgatcatc gccggccttc
     4201 tccccaatgt cgccgccgat ctcaacgtcg acatcccgac cgccggcctg ctgatcaccg
     4261 gctatgcgct cggtgtcgcc atcatcggtc cgatcctcgc cctcgtcact gcgaccctgc
     4321 cccgccgcgc gctgctgctc gggctggtgg cgatcttcgt ggtcggcaat tgcatctgcg
     4381 ccgtctcggc ctcgtactgg atgctgctgg gcgcgcgcct cgtcatcgcg tgctgccacg
     4441 gcctgttttt cggcgtggcg atcgtcatgg cgagccggct cgcgccggat ggccggcaga
     4501 ccagcgccat ctcggtcgtc gt
//
LOCUS       DATAZA010000393         4511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1096389, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000393 DATAZA010000000
VERSION     DATAZA010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4511
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1096389"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..339
                     /locus_tag="VHZ56_09885"
     CDS             <1..339
                     /locus_tag="VHZ56_09885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131370.1"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HEX4298323.1"
                     /translation="ASAFADLGFVVRMGDLFETAPEVAAHVRQLRVDAVGVSSLAAGH
                     KTLVPELVAELAANGLGDTTIIVGGVIPPEDYPFLRNAGVAEIFGPGTNVLEAAAAVL
                     DRIEGRLSNR"
     gene            464..889
                     /gene="mce"
                     /locus_tag="VHZ56_09890"
     CDS             464..889
                     /gene="mce"
                     /locus_tag="VHZ56_09890"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HEX4298324.1"
                     /translation="MIGRLNHVAIAVPDLAAAAAKYRDLLGATVHPPRQLPAHGVTVV
                     FVDLDNTRLELMTPLGDHSPIAKFLADHPRGGIHHVCFEVPDLVHAARTLVAAGARIL
                     GDGAPRLGAHDLPVLFLHPADFDGTLIELEEVKPDILPA"
     gene            961..2067
                     /locus_tag="VHZ56_09895"
     CDS             961..2067
                     /locus_tag="VHZ56_09895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003611998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX4298325.1"
                     /translation="MPTWSPQQDAALLAVSAWLKDPAAPQVFRLFGWAGTGKSTLARY
                     LAEGVRGVKYAAFTGKAALVMRRKGCRGASTIHSLIYTLVSEKEGEPRFALDPESEAA
                     SAELIVIDEVSMVDEALATDLLSFGTKVLVLGDPFQLPPVAGAGFFTAHDPDVMLTEI
                     HRQAADNPIIRMSMEIREGGYLEYGRYDDSIVIPKSEVDREAVVTADQVLVGRNKTRV
                     DYNDRLRELKALPRHEPVAGDRLVCLRNNPKKRLLNGQIWTAAEVKKRTGMRYSLTLA
                     PEEETTAAGNKALVHVVTHGAFFSGEEEQLGWPERRRFDEFTFGYCLTVHKAQGSQWD
                     KVYLFDESFVFREDRRRWLYTGITRASQQVTVVV"
     gene            2145..2396
                     /locus_tag="VHZ56_09900"
     CDS             2145..2396
                     /locus_tag="VHZ56_09900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007754801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298326.1"
                     /translation="MSLLDYSLPADLYPARNRSRKSPLRYMRFDTVAEAVRFAIEELP
                     PEQLAGTMLEVDESRFDAAAIGQLYQSDDYPLVRPIAAA"
     gene            2553..2771
                     /gene="infA"
                     /locus_tag="VHZ56_09905"
     CDS             2553..2771
                     /gene="infA"
                     /locus_tag="VHZ56_09905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002517801.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEX4298327.1"
                     /translation="MPKEEMLEFPGTVTELLPNATFRVKLDNDHEIIAHTAGKLRKNR
                     IRVLAGDKVLCEMTPYDLTKGRLVYRFR"
     gene            2861..3913
                     /locus_tag="VHZ56_09910"
     CDS             2861..3913
                     /locus_tag="VHZ56_09910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016733517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX4298328.1"
                     /translation="MDYRLLGRSGLKVSSLTIGTMTFGGDAATIGHTQLADARRQIDL
                     CLDHGVNLIDTANVYAGTVSEQIIGDILSEAGRRDRVLLATKVRFPVGDGVNDRGLSR
                     WHIMREAEASLRRLKTDVIDLYQVHEWDGLTPLEETVEALDTLVRQGKVRYVGCSNYS
                     AWHLMKALAVADAGHYQRFVSQQIHYTLHSREAEYELVPLGLDQGVGILVWSPLAGGL
                     LSGKYTRKGGPGAGRHTSEYKEPPVPDWERLYDIVDVINAIAAARNVSGAQVSLAWLL
                     QRPLVTSVVIGGRSLAQFEDNLQAAELQLTADEVARLDKVSRPPLLYPYWHQSFTASD
                     RLSGPDRVLHDPYLKD"
     gene            4021..4476
                     /gene="rirA"
                     /locus_tag="VHZ56_09915"
     CDS             4021..4476
                     /gene="rirA"
                     /locus_tag="VHZ56_09915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010658815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-responsive transcriptional regulator RirA"
                     /protein_id="HEX4298329.1"
                     /translation="MRLTRQSSYAIRTLIYCAVNGPELSRIADIARAHGISELFLFKL
                     IKPLVENGLIETVRGRKGGIRLGRPASEITLLDTVKLTEENFAMAECFEGSDVRCPLA
                     DACDLSGALHEALAAFFDVLDGYTIADLADKRRSIRVRLGLEDRRVLTQ"
BASE COUNT          721 a         1714 c         1324 g          752 t
ORIGIN      
        1 gcctcggcct tcgccgatct cggcttcgtc gtccgcatgg gcgacctgtt cgaaaccgcg
       61 ccggaagtgg ccgcgcacgt ccgccagctg cgcgtcgacg ccgtcggcgt ctcctcgctc
      121 gccgccggcc acaagaccct cgttccggaa ctcgtcgccg aactcgcagc gaacggcctc
      181 ggcgacacca ccatcatcgt cggcggtgtc atcccgcccg aggactatcc cttcctccgc
      241 aacgccggcg tcgccgagat cttcggcccc ggcaccaacg tcctcgaagc cgccgccgcc
      301 gtcctcgacc gcatcgaggg gaggttgagc aaccgatgat gtggcaacag ccccctcccc
      361 attcatcgag cgggtggcac gatggcggac caattcaccg gcgggcaccc tgctccttgc
      421 ggggagggcc ggggaggggg gcgcccctcg ctcggcgtcc ccgatgatcg gccgcctcaa
      481 tcacgtcgcc atcgccgtcc ccgatctagc tgccgccgcg gcgaaatatc gtgacctgct
      541 cggcgcgacg gtgcacccgc cgcgccagct gccggcgcac ggcgttaccg tcgtcttcgt
      601 cgatctcgac aacaccaggc tcgagctgat gaccccgctc ggcgaccatt cgcccatcgc
      661 gaaattcctc gccgaccatc cgcgcggcgg catccaccac gtctgcttcg aggtgcccga
      721 cctcgtccac gccgcccgca ccctcgtcgc cgccggcgcc cgcatcctcg gcgacggcgc
      781 gccgcggctc ggtgcccacg acctgccggt gctgttcctc catcccgccg atttcgatgg
      841 cacgctgatc gagctcgaag aggtgaagcc ggacatcctg ccggcgtgaa gttcctgttt
      901 tgtttccgtc gactttcccc tacatagggg catgcctctg ccccattcct ccgttccctg
      961 atgcccacct ggtcgcccca gcaggatgcg gcgctgctcg ccgtctccgc ctggctcaag
     1021 gatcccgccg cgccgcaggt cttccggctc ttcggctggg ccggcaccgg caagtcgact
     1081 ctcgcgcgct acctcgccga gggcgtccgc ggcgtcaaat atgccgcctt caccggcaag
     1141 gcggcgctgg tcatgcgccg caagggctgc cgcggcgcct cgaccatcca ctcgctgatc
     1201 tacaccctcg tctccgagaa ggaaggcgag ccgcgcttcg ccctcgatcc cgaatccgag
     1261 gccgccagcg ccgagctgat cgtcatcgac gaagtctcga tggtcgacga ggcgctggcg
     1321 accgacctgt tgagcttcgg caccaaggtg ctcgtcctcg gcgatccgtt ccagctgccg
     1381 ccggtcgccg gtgccggctt tttcaccgcc cacgatcccg acgtcatgct gaccgagatc
     1441 catcgccagg ccgccgacaa tccgatcatc cgcatgtcga tggagatccg cgaaggcggc
     1501 tatctcgaat atggccgtta tgacgactcg atcgtcattc caaaatccga ggtcgaccgc
     1561 gaggccgtcg tcaccgccga ccaggtgctg gtcggtcgca acaagacccg cgtcgactac
     1621 aacgaccggc tgcgcgagct gaaagcgctg ccccgccacg agccggtggc cggcgatcgc
     1681 ctggtctgcc tgcgcaacaa tcccaagaag cgcctgctca acggccagat ctggaccgcc
     1741 gccgaggtca agaagcgcac cggcatgcgc tactcgctca ccctcgcgcc cgaagaggaa
     1801 accaccgccg ccggcaacaa ggcgctcgtc cacgtcgtca cccacggcgc cttcttttcc
     1861 ggcgaggaag agcagttggg ctggcccgag cgccgccgct tcgacgaatt caccttcggc
     1921 tactgcctca ccgtccacaa ggcgcagggc tcgcagtggg acaaggtgta tctcttcgac
     1981 gagagcttcg tgttccgcga ggatcgccgc cgctggctct ataccggcat cacccgcgcc
     2041 agccagcagg tcaccgtcgt cgtctgaggc ttgtgtccgg cgtcccgcat gcccatatac
     2101 gatgtcccgc caccatcgtg tcgcgtcggt gaaaggtggt ctccatgtcg cttctcgatt
     2161 attcgctccc cgccgacctc tatccggcgc gcaaccgctc gcgcaaaagc ccgctgcgct
     2221 acatgcgttt cgacacggtc gccgaggccg ttcgcttcgc catcgaggaa ctgccccccg
     2281 agcagctggc cggcaccatg ctggaggtcg acgagtcgag gtttgacgcc gccgccatcg
     2341 gccagctcta ccaatctgac gactatccgc tggtgcgccc catcgctgcg gcatgagggt
     2401 gcgccggtgg ttcacaaacc atccggcttc ctgtagggtc cgcgccactc gaacgcctgc
     2461 gcctgctgca tcggaccggt ttcccggctc cgggcgtggg cgcctatcat tgtcggcccg
     2521 ccgcgcgcgt caccggccac actggagagc ctatgccgaa agaagaaatg ctggaattcc
     2581 cgggcacggt caccgaactg ctgcccaacg cgacgttccg cgtcaaactc gacaacgacc
     2641 acgagatcat cgcccacacc gccggcaagc tgcgcaagaa ccgcattcgc gtgctcgcgg
     2701 gcgacaaggt gctgtgcgaa atgaccccct acgatctcac caagggccgg ctggtctacc
     2761 gcttccgcta gcggccctgg tccccggtcc gttcgcgcgt cgcctcttat cagttcaact
     2821 ctgccgcgct agaacctccg ccgcccacgg aggttgactg atggactatc gactgctcgg
     2881 ccgctccggc ctcaaggttt cttccctcac catcggcacg atgaccttcg gcggcgacgc
     2941 cgccaccatc ggccacaccc agctcgccga cgcccgccgc cagatcgatc tctgcctcga
     3001 tcacggcgtc aacctcatcg acaccgccaa cgtctatgcg ggcaccgtct ccgagcagat
     3061 catcggcgac atcctcagcg aggccgggcg ccgcgaccgc gtgctgctcg ccaccaaggt
     3121 ccgcttcccg gtcggcgacg gcgtcaacga tcgcggcctc agccgctggc acatcatgcg
     3181 cgaggccgag gcctcgctcc ggcgcctcaa gaccgacgtc atcgacctct accaggtgca
     3241 cgagtgggac ggcctgaccc cgctcgagga aaccgtcgag gcgctcgaca ccctcgtccg
     3301 ccagggcaag gtccgctacg tcggctgctc gaactattcg gcctggcacc tgatgaaggc
     3361 gctcgccgtc gccgacgccg gccactacca gcgcttcgtc tcccagcaga tccactacac
     3421 gctgcactcg cgcgaggccg aatacgagct ggtgccgctc ggcctcgacc agggcgtcgg
     3481 catcctcgtc tggtcgccgc tggccggtgg cctgctctcg ggtaaataca cccgcaaggg
     3541 cggtcccggc gccggccgcc acaccagtga atacaaggag ccgccggttc ccgactggga
     3601 gcgcctctac gacatcgtcg acgtgatcaa cgccatcgcc gccgcgcgaa acgtctccgg
     3661 cgcgcaggtc tcgctcgcct ggctgctgca gcgcccgctg gtcacctcgg tggtcatcgg
     3721 cggccgcagc ctcgcgcagt tcgaggacaa tctgcaggcc gccgagttgc agctcaccgc
     3781 cgacgaggtg gcgcgcctcg acaaggtcag ccggccgccg ctgctctatc cctactggca
     3841 ccagagcttc accgcctccg atcgcctgag cggtcccgac cgcgtgctgc acgatcccta
     3901 tctcaaggac tgagcgtcgt gtcgccgcgt tgacaaaacc tggaacgact ctaaactgga
     3961 gcccggcgat cagataaaaa gtcgttcgat ttcaacggct tgtcgctgga gactccgtcc
     4021 atgcggctca cccgccaatc gagttacgcc atccgcacgc tgatctattg tgcggtgaac
     4081 ggtccggagt tgagccgcat cgccgacatc gccagggcgc acggcatctc cgagctgttc
     4141 ctgttcaagc tcatcaagcc gctggtcgag aacggcctca tcgagaccgt gcgcggccgc
     4201 aagggcggca tccgcctcgg ccgtcccgcc tccgagatca cgctgctcga caccgtcaag
     4261 ctgaccgagg aaaactttgc catggccgag tgcttcgaag gcagcgatgt ccggtgcccg
     4321 ctcgccgacg cctgcgatct gagcggcgcc ctgcacgaag cgctggcagc cttcttcgac
     4381 gtcctcgacg gctacaccat cgccgatctc gccgacaagc gccgctccat ccgcgtccgc
     4441 ctcggcctcg aggatcgccg cgtcctgacg cagtgacgtg cgggctgcgg ccaacggccc
     4501 cgtagccgtc a
//
LOCUS       DATAZA010000394         3634 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1675778, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000394 DATAZA010000000
VERSION     DATAZA010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3634
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1675778"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            53..253
                     /locus_tag="VHZ56_09920"
     CDS             53..253
                     /locus_tag="VHZ56_09920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298330.1"
                     /translation="MARNGDPHPEPDDPATMPAPLFPPGAGGVRSITPPRPGIVRPSD
                     PNPAPARAPFPDHVPDPGTSKQ"
     gene            complement(257..655)
                     /locus_tag="VHZ56_09925"
     CDS             complement(257..655)
                     /locus_tag="VHZ56_09925"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013528068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEX4298331.1"
                     /translation="MSVSLRNVPGTEAAMGWAGGHTVIVDRPEGRAGGMGLGFNGGQM
                     IALAIGGCFCNDLRYMAETMHVELDDIAVDVEIELDGTPLLVKSATLSVNVTSRDAGT
                     DLAELVRRAAADSTVGNSVQRGFPVAVVSR"
     gene            complement(667..2166)
                     /gene="gatB"
                     /locus_tag="VHZ56_09930"
     CDS             complement(667..2166)
                     /gene="gatB"
                     /locus_tag="VHZ56_09930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016553659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEX4298332.1"
                     /translation="MTLIDTRTPEPKSFIKGQTGDWEVIIGMEVHAQVTSESKLFSGS
                     STEFGRPPNSNVSFVDAAMPGMLPVINEECVRQAVRTGLGLKAAINRRSIFDRKNYFY
                     PDLPQGYQISQYKDPIVGEGKVLLDMGGEAPIEIGIERLHLEQDAGKSIHDQHPSMSL
                     VDLNRSGVALMEIVSKPDLRSSDEAKAYLGKLRTILRYLGTCDGNMEQGSMRADVNVS
                     VRKPGGEFGTRCEIKNVNSIRFAGQAIEYEARRQIDILEDGGSIDQETRLFDPKNGET
                     RSMRSKEEAHDYRYFPDPDLLPLEFDQAFVDELARHLPELPDEKQARFIREYGVTPYD
                     AMVLTLERETADYYEAAVKAGSTRRDGKAVANLVTGDIAAYANSQGLSAWETHIQPAQ
                     VAGIVDLVAAGTISSKGAKDLLQVIIAEEPEGDPAAIVERRGMKQVTDTGAIEKVVDE
                     IIAANPDQVAKVQAKPTLIGWFVGQAMKASGGKANPQALNEILKRKLGL"
     gene            complement(2167..2697)
                     /locus_tag="VHZ56_09935"
     CDS             complement(2167..2697)
                     /locus_tag="VHZ56_09935"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4298333.1"
                     /translation="MTLMSLNTLIRKAIPGEIETLADIAFVTWERDLRPFLSGPATGR
                     EAEQNRLSAAVRDGLDRIIVAEVNDVAAGWCQRMRGRPYIPFLFVTPLLQNQGVGSAL
                     LRRMESMLELEGHERIQLDTLADNVRAVNFYQHQGYQILALKSEGQPGREAPMSVRLE
                     KRLDPWRGPIDDTGKQ"
     gene            complement(2694..3002)
                     /locus_tag="VHZ56_09940"
     CDS             complement(2694..3002)
                     /locus_tag="VHZ56_09940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HEX4298334.1"
                     /translation="MSKPAADCTSKEDVRAELDRIDQALLTLFAERHRYVTRMAEIKT
                     DPHEAHDPVRINAVLQKQRRRAEELGLDEDQAELIWKTLIDWNVNYEKGIIVARRGAK
                     "
     gene            3136..3609
                     /locus_tag="VHZ56_09945"
     CDS             3136..3609
                     /locus_tag="VHZ56_09945"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX4298335.1"
                     /translation="MLKLGLLAVAALAFAPAAAMADDVSVANGLRISIVGGCNDCHTV
                     GYAESNGKIDPDAALKGNPVGYGGPWGVNYAKNLRIDAAKMSEDDWVKFLQTFQAGPP
                     MPWYNVHAFSEAEMRSLYQYIKSLGAPGDPAPADVPPGQKPTTPFITMAPPTMPG"
BASE COUNT          550 a         1235 c         1191 g          658 t
ORIGIN      
        1 ggaacgccag agccagccgg ccgttctgtg atggtcacag aggagaccgg tcatggcccg
       61 caacggcgat ccccaccccg aacccgacga tcctgctacc atgcccgcgc cgctgttccc
      121 gcccggcgcg ggtggcgttc gctccattac accgccacgg ccgggcatcg tccgtcccag
      181 cgatccgaac ccggctccgg cgcgcgcgcc gttccccgac catgtgccgg acccgggaac
      241 gagcaagcag tgacgtctag cggctgacca ccgccaccgg aaatccccgc tgcactgaat
      301 tgccgaccgt cgaatcggcc gcggcgcgcc gcaccagttc cgcgaggtcg gtgcccgcgt
      361 cccggctggt gacgttgacg ctgagcgtcg ccgatttcac cagcagcggc gtgccgtcga
      421 gttcgatctc gacatcgacc gcgatgtcgt cgagttcgac gtgcatggtc tcggccatat
      481 agcgcagatc gttgcagaag cagccgccga tcgcgagtgc gatcatctgg ccgccgttga
      541 agccgaggcc catgcccccg gccctgccct cggggcgatc gacgatcacc gtgtgtccgc
      601 cggcccatcc catggccgcc tcggtgccgg ggacgttgcg gaggctaacg ctcatggcgg
      661 ccaccgctag agccccagct tccgcttcaa gatctcgttc agcgcctgtg ggttggcctt
      721 gccgccgctc gccttcatcg cctgcccgac gaaccagccg atcagcgtcg gcttggcctg
      781 caccttggcc acctggtcgg gattggcggc gatgatctcg tccaccacct tctcgatcgc
      841 gccggtgtcg gtcacctgct tcatgccgcg ccgctcgacg atcgccgccg ggtcgccctc
      901 gggctcctcg gcgatgatca cctgcagcag gtccttggcg cccttggacg aaatggtgcc
      961 cgccgccacc agatcgacga tgccggcgac ctgcgccggc tggatgtggg tctcccacgc
     1021 cgacagcccc tggctgttgg cataggcggc aatgtcgccg gtgacgaggt tcgcaactgc
     1081 cttgccatcg cgccgggtac tgcccgcttt caccgctgcc tcgtaataat cggccgtttc
     1141 gcgctcgagc gtcagcacca tcgcgtcgta cggcgtcacg ccatactcgc ggatgaagcg
     1201 cgcctgcttt tcgtcgggca gctcaggcaa atgccgcgcc aattcgtcga cgaacgcctg
     1261 gtcgaattcg agcggcagca ggtccgggtc ggggaaatag cggtagtcgt gcgcctcttc
     1321 cttggagcgc atcgagcggg tctcgccgtt tttgggatcg aacagccggg tttcctggtc
     1381 gatgctgccg ccgtcctcca gaatgtcgat ctggcggcgc gcctcgtact cgatcgcctg
     1441 gccggcgaag cggattgaat tgacgttctt gatctcgcag cgggtgccga attcgccgcc
     1501 gggcttgcgc accgagacgt tgacgtcggc ccgcatggaa ccctgttcca tgttgccgtc
     1561 gcaggtgccg aggtagcgca ggatggtgcg cagcttgccc aggtacgcct tggcctcgtc
     1621 ggacgaacgc aaatcgggct tgctgacgat ctccatcagc gccacgccgg agcggttgag
     1681 atcgacgagg ctcatcgagg gatgctggtc gtggatcgac ttgccggcgt cctgctcgag
     1741 atgcagccgc tcgatgccga tctcgatcgg cgcctcgccg cccatgtcga gcagcacctt
     1801 gccctcgccg acgatggggt ccttgtactg gctgatctgg tagccctgcg gcaagtccgg
     1861 gtagaagtag ttcttgcgat cgaagatcga gcgcctgttg atcgccgcct tcagcccgag
     1921 gccggtccgc acggcctgcc gcacgcattc ctcgttgatc accggcagca tgcccggcat
     1981 cgccgcgtcg acgaacgaga cgttggaatt gggtggccgg ccgaactcgg tcgaggagcc
     2041 ggagaacagc ttgctctcgg acgtcacctg ggcatggacc tccatgccga tgatcacctc
     2101 ccagtcgccg gtctggccct tgatgaagct cttgggctcg ggggtacgcg tatcgatgag
     2161 ggtcaactac tgctttccgg tatcgtcgat gggaccgcgc caggggtcga ggcgcttttc
     2221 gagccggacg ctcatcggcg cctcgcggcc gggctggcct tcggatttga gcgccaggat
     2281 ctggtagccc tggtgctggt agaaattcac cgcccgcaca ttgtcggcca gcgtgtcgag
     2341 ctggatgcgc tcgtggccct cgagttcgag catggactcc atccgccgca gcagggccga
     2401 gcccaccccc tggttctgca gcagcggggt cacgaacagg aacgggatgt agggccggcc
     2461 gcgcatccgc tggcaccagc cggcggcgac gtcgttgacc tcggcgacga tgatgcggtc
     2521 gagcccgtcg cgcaccgcgg cgctcagccg gttctgctcc gcctcgcgcc ccgtcgccgg
     2581 accgctgagg aacggccgca ggtcgcgctc ccaggtgacg aaggcgatgt cggcgagggt
     2641 ttcgatctcg ccggggatcg ccttgcggat gagcgtgttg agggacatga gcgtcatttc
     2701 gcgccgcgcc gggcgacgat aatgcccttt tcgtaattca cgttccagtc gatcagcgtc
     2761 ttccagatga gctcggcctg gtcctcgtcg agccccagtt cctcggcccg ccgccgttgc
     2821 ttctgcagca ccgcgttgat gcgcaccggg tcgtgcgcct cgtgcgggtc ggtcttgatc
     2881 tcggccatgc gggtcacgta gcggtgccgc tcggcgaaca gcgtcagcag cgcctggtcg
     2941 atgcggtcga gctcggcgcg gacgtcttcc ttgctggtgc agtcggcggc aggtttgctc
     3001 acggcatggc tcgcgaaagg cgggatggac tgctgctggt ttgcacggat cgggcggctt
     3061 tttcaacctt gcgcgggggc gcgaagaagg ccacgctgcg gccgcacaat tacgatggct
     3121 tggggaggct cgttgatgct taaacttgga ttgctcgccg tggcggcgct ggcgttcgca
     3181 ccggccgccg cgatggccga cgacgtatcg gtcgccaacg ggctcaggat ctcgatcgtc
     3241 ggcggctgca atgactgcca caccgtcggc tacgcggaat cgaacggcaa gatcgacccc
     3301 gacgccgcgc tcaagggcaa tccggtcggc tatggcggcc cgtggggcgt caactacgcc
     3361 aagaatttaa ggatcgacgc cgccaagatg agcgaagacg actgggtcaa gttcctgcag
     3421 acgttccagg ccggcccgcc gatgccatgg tacaacgtgc acgccttcag cgaggccgag
     3481 atgcgctcgc tctaccagta catcaagtcg ctcggcgccc caggcgaccc ggcccccgcc
     3541 gacgtgccgc cgggccagaa gccgacgacc ccgttcatca ccatggcacc gccaacgatg
     3601 ccgggctgag gccggctcga cgacaggcgc caaa
//
LOCUS       DATAZA010000395         1743 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_51181, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000395 DATAZA010000000
VERSION     DATAZA010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1743
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51181"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..242
                     /locus_tag="VHZ56_09950"
     CDS             <1..242
                     /locus_tag="VHZ56_09950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298336.1"
                     /translation="LTDDSLWDKIRPVMNVKDDDALFKQLRDDYRAGIVSHYIASDME
                     PAKQAFALMAQYGGKDVVGDVTDLDDGTFWKGFHK"
     gene            323..1048
                     /locus_tag="VHZ56_09955"
     CDS             323..1048
                     /locus_tag="VHZ56_09955"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX4298337.1"
                     /translation="MSPILLLVVWQVLAMVFPGRLFPTPVAVAIELWTDIVDGKLISD
                     MAKTLRRAAISFTVAMAIGIAIGILFGRSRIADRLFSSWVIVGLNLPAVVIAIVLYIS
                     LGLTETAIVLAVIINKVPLVVTTIREGVRSFSPDYDELALAFRMPFWRRLRLVFIPQL
                     TPFVLAAARTGLALIWKIVLVFEVLGSDGGVGFRINTMFQFFDMTGILAYTAAFILVV
                     LVFEYWVMGPLEHYFLRWRTDRG"
     gene            1027..>1743
                     /locus_tag="VHZ56_09960"
     CDS             1027..>1743
                     /locus_tag="VHZ56_09960"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4298338.1"
                     /translation="MADGPRLNIDVDAKRFPGSAAPLLENFHVTIPPSQVVALVGPSG
                     VGKSSLLRMIAGIDDDYSGSITIDGKAANAAPPAGFVFQDSRLLPWLSALDNIRAVRE
                     ATTEAEARDFLARVGLAGSENAYPAQLSGGMQRRVALARAFSVNPRLLLLDEPFVSLD
                     AHLVAGVQRVFVDLVRDIRSTAILVTHLPDDAAKMADRAIVLGGRPARIVADIELTPP
                     RDTRSEEQIRSLALALSNYEA"
BASE COUNT          272 a          585 c          545 g          341 t
ORIGIN      
        1 tgctgaccga cgattcgctg tgggacaaga ttcgccccgt aatgaacgtc aaggacgacg
       61 atgccctctt caagcagctg cgcgacgact accgcgccgg catcgtgtcg cactacatcg
      121 cctccgacat ggaaccggcc aagcaggcct tcgcgctaat ggcccagtac ggcggcaagg
      181 acgtcgtggg tgacgtgacc gatctcgacg acggcacgtt ctggaagggg ttccacaaat
      241 agactacatg ccgggcggcg cgccgcctgc gcgcaccaag actaaaatgg cccgccgcgc
      301 ctcaggggtg cggtgggagt tcgtgagccc gatcctgctg ctggtggtct ggcaggtgct
      361 ggcgatggtc tttcctggcc gcctgttccc cacgcctgtc gccgtcgcaa tcgagctgtg
      421 gacggacatc gtcgacggca agcttatctc cgacatggcc aagacgctcc ggcgtgcggc
      481 gatctcgttt accgtggcaa tggccatcgg catcgccatc ggcatcctgt tcggccgctc
      541 gcgcattgcc gaccggctgt tttcgagctg ggtgatcgtt ggcctcaatc tgccggcggt
      601 ggtgatcgcc atcgtcctct acatctcgct cgggctgacc gagacagcga tcgtgcttgc
      661 cgtcatcatc aacaaggtgc cgctggtcgt cacgaccatc cgggaagggg tgcgcagctt
      721 ttcacccgac tatgacgagc tcgcccttgc cttccgcatg ccgttctggc gtcggctcag
      781 gctggtcttc atcccgcagc tcaccccctt cgtgctggcg gcggcgcgca ccgggctggc
      841 cctgatctgg aagatcgttc tcgtgttcga agtgctgggc agcgacggcg gcgtcggctt
      901 tcgcatcaac accatgttcc aattcttcga catgacaggc attctcgcct acacagcggc
      961 gttcatcctc gtggtgctcg tcttcgaata ttgggtcatg gggcccctgg agcactactt
     1021 cttgagatgg cggacggacc gcggctgaac atcgacgtcg acgcgaagcg attcccgggc
     1081 tcggccgcgc cgctgctcga gaacttccac gtcaccattc cgccatcaca ggtggtggcg
     1141 ctggttgggc cgtcgggcgt cggtaaatcg agcctgctgc ggatgatcgc cgggatcgat
     1201 gacgactatt cgggctcgat taccatcgac ggcaaagccg ccaacgccgc cccgccggcc
     1261 ggctttgtgt tccaggattc gcggctgctg ccctggctga gcgcgctcga caatatccgc
     1321 gcggtgcgcg aggcaacgac cgaagccgaa gctcgtgact tcctggcacg ggtggggctt
     1381 gccggcagcg agaatgccta tccggcgcaa ctgtcgggcg gcatgcagcg gcgcgtcgcg
     1441 ctggcccgtg ccttctcggt gaacccgcgc ctgctgctcc tcgacgagcc cttcgtttcg
     1501 ctcgacgccc accttgtcgc cggcgtgcaa cgggtgtttg tcgacctcgt gcgcgacatc
     1561 cgttcgaccg ccatcctggt aacccacctg cccgacgacg ccgccaagat ggccgaccgc
     1621 gccattgtgc ttgggggccg tccggcacgg atcgtcgccg acatcgagtt gaccccgccg
     1681 cgcgatacgc gcagcgagga gcaaatccgc tccctggcgc ttgccctatc gaactacgag
     1741 gct
//
LOCUS       DATAZA010000396        16324 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3765832, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000396 DATAZA010000000
VERSION     DATAZA010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 16324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16324
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3765832"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..731)
                     /locus_tag="VHZ56_09965"
     CDS             complement(<1..731)
                     /locus_tag="VHZ56_09965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4298339.1"
                     /translation="MARTYGVGIMGAGNISSAYLRLAPLFKGLEVRAVADILPEAAKK
                     RAEEFKVKAQTPDELLKNSEIDVVVNLTIPATHYRVSMDAISAGKHAYSEKPFVLTLE
                     EGKALKKAADERKLRVGSAPDTFLGGAHQQVRDLIDGGKLGRITSGTTHVMSRGMEHW
                     HPNPDFFFQVGAGPVLDIGPYYVTDLIQLIGPVKRVTAFTSMARATREVTAEGPYKGT
                     HIKVGTPTTIHGVLEFHSGAIVTIGA"
     gene            complement(734..1480)
                     /locus_tag="VHZ56_09970"
     CDS             complement(734..1480)
                     /locus_tag="VHZ56_09970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008125992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEX4298340.1"
                     /translation="MDFSIQLYSARNEASLDATLKSLKQLGYTQVEGWGGQFADPAGL
                     AASLKAAGLTMPTAHIGYKQLEDTAAAVNIAKTVGIKTIYCPAPPSDDYRNGTGDWVK
                     LGEGLATIGKALNAGGVGFGYHNHHWEFGKLADGRRPIEILLGSLPSLEWEMDLAWLV
                     KAGEDPVAWMDKLGSRITAVHVKDIAPAGQALDEDGWADVGYGTLDWKSLLQTIKAKT
                     KAKYLVAEHDKPSDAMRFARRSMESVKKWM"
     gene            complement(1594..2667)
                     /locus_tag="VHZ56_09975"
     CDS             complement(1594..2667)
                     /locus_tag="VHZ56_09975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4298341.1"
                     /translation="MAQVQVRDLDISFGAVKVLQKLNVTAEDGEFLVLLGPSGCGKST
                     LLNAVAGLLDINGGQIFIGGKNVTWEEPKDRGIGMVFQSYALYPQMTVEKNLSFGLQV
                     AGVKKDEIKRRVGRASEILQIGPLLDRKPANLSGGQRQRVAIGRALVREVGVFLFDEP
                     LSNLDAKLRSELRVEIKRLHQRLKNTMIYVTHDQVEAMTLADRIAIMRDGVIQQLDDP
                     HTIYNKPKNLFVAGFIGSPTMNFFHGKLGGGSVALNGVSVPLASYPVGSASDGTDVVL
                     GVRPEHVALGEDARKMPFSVESEIEIVEPMGSDTIAWTKIGGQPLTFRAAAEVHLVTG
                     MKVLIGFDPGRASLFDAGSGLRV"
     gene            complement(2672..3586)
                     /locus_tag="VHZ56_09980"
     CDS             complement(2672..3586)
                     /locus_tag="VHZ56_09980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007788334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX4298342.1"
                     /translation="MSAVAMDMSVRATTDPSGPKPKRLTIGRIGLYAFLVISAIFFLV
                     PVYVMIITSLKDMPEILSSNVLSPPLHPTVQPWIDAWLHACTGGDCSGLSPGFFNSVK
                     ITVPAVIVSIGVSTLTGYALSFWNYKGANFFFGLLIFGAFVPYQVVIYPVIIGLRTVH
                     LFSTLGGIIAVHTIFGMPVLVLLFRNFYASIPIELFKASRVDGSNFWQTFFYIMLPMS
                     VPITTVALILQVTGIWNDFLFGVIYAGRSNWPMTVQLLNIVKTTQGIPQYDVNMAATI
                     EAAAVPLIIYFVSGRWFVRGIAAGAVKG"
     gene            complement(3583..4476)
                     /locus_tag="VHZ56_09985"
     CDS             complement(3583..4476)
                     /locus_tag="VHZ56_09985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006200446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX4298343.1"
                     /translation="MAERTRKKLPIAAIIATIPLMIESVGVYIFGIGLSVYFSFTNTV
                     VFPDYKFVGLKQYQRLWTTDIWLTAVKNIWLFGFLSIAANLVFGYLLAVFMDQRIKQE
                     DLLRTIFLYPFAMSLIVTGLVWQWVLDPNYGLDATMHGFGWTSFHFSPLNDANTALYG
                     LVVAGVWQGAGVTMAVLLAGLRGVDGEIWKAARVDGIPAWRTYLFIALPMMRGAVATA
                     VTFQCINVLRVYDLIVSMTGAGPGNATMMPAVYVLQYLTDRQNVAQGMAAATTMLLPV
                     VIVLICVGVYRFLRKRKVVTA"
     gene            complement(4653..6002)
                     /locus_tag="VHZ56_09990"
     CDS             complement(4653..6002)
                     /locus_tag="VHZ56_09990"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4298344.1"
                     /translation="MLPAGRPLQEGRRQADGRGRSIRFRSTLGGQLMNRLSLVALAAA
                     SLMLTTSAHATDLEVIHWWTSPGETAAVHTFRDAFNNDGAGDKWVDDAIADGDTARST
                     DMTRIQGGDPPGASQFNPGREYEELIKNNLLLDLTDLATAGNWEKVIRPHEVSEGCLV
                     DGHWWCVPVNIHSWNWAWYSKAAFKAAGLPDPHNFQDFLADAPKLKAAGIIPFAVGGD
                     GGGWQIVGAFNLIMVEELGHADRDKVLHDKDIDIAGGAKFKQLLTDFKSLRQYADDGY
                     ANRNWNDTWKLVDSGKAALQIMGDWERGEFAAKGEVGDKDYGCIAGFDDAHPTASTSG
                     DVFVFPKQTDPDKEAAQKRLANLLISPAVQLAFNNAKGSSPVRSDVDMGAADPCLQKA
                     LDIFNNHPDEVVTDVSRWLSNDTTNQMNDLFTKFFNDASYTVDQAQADYVNILKNAN"
     gene            6134..7210
                     /locus_tag="VHZ56_09995"
     CDS             6134..7210
                     /locus_tag="VHZ56_09995"
                     /inference="COORDINATES: protein motif:HMM:NF012742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000976 - transcription cis-regulatory
                     region binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX4298345.1"
                     /translation="MDTGRKQPTIQDVARHAKVSAATVSRVLSAPERVSEATRERVHL
                     AVSDTGYTINQAARTLRLQRARTILAAMPGIGNPFYSTILEAVVTEATSRGYGVLVTG
                     RLGDDPARWLSDYFLSNRADGLLLFDGFLDTHRLHAVTGEGSSLPLVAAYDELPDPRI
                     NSVITDNLQAAERAVQHLVDCGHRRIGHISGPSRNTFPNERVVGFRKAMREHGLEIRE
                     NWIFAGDYSMQSGRSAAAHFAAQSELPTAVFSANDEMAIGLMATFRKLGIECPRDISI
                     IGFDDIGVAENYAPALTTMRQPREQIGRMAAEMLINILEHNVASPAPLRVVLQSELIV
                     RDSTAPPPAVTAPVEPAKGSVTAP"
     gene            7201..7276
                     /locus_tag="VHZ56_10000"
     tRNA            7201..7276
                     /locus_tag="VHZ56_10000"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7234..7236,aa:Arg,seq:tct)
     gene            complement(7284..7733)
                     /locus_tag="VHZ56_10005"
     CDS             complement(7284..7733)
                     /locus_tag="VHZ56_10005"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX4298346.1"
                     /translation="MSEPLLPIVAEISIAAPMDKVWQVATGEATVAGWLGAIDYKAAV
                     GTTFFMQQDPARRAARDTEGATWCDVLLLEEPTKFAFSWYLPGTPKTMVQLDLSPDGP
                     DRTFVRVIHDGWDDFEREAMEEFYEALARGWQDDVLPRLKKLAESGG"
     gene            7925..8608
                     /locus_tag="VHZ56_10010"
     CDS             7925..8608
                     /locus_tag="VHZ56_10010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HEX4298347.1"
                     /translation="MPARDAEVRPWWFNPRPFSMAELVADGIVHGIGIVFAISLGTVL
                     VVFAAIGTARPELPAIIIYLLTLLIVLGVSLAFNLAPISGFKKVMARLDQAAIFLFIA
                     GTYTPFLAVLSGTPGIDLMYVLVWGAAIVGIALKLIVPQRFGRLALLLYLAIGWSGVL
                     VFHALAATLPPVTLWLLVAGGITYSAGIVFHLWERLKFQNVLWHVFVVAGAICHLWAI
                     FDCMVLSRL"
     gene            complement(8621..9118)
                     /locus_tag="VHZ56_10015"
     CDS             complement(8621..9118)
                     /locus_tag="VHZ56_10015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HEX4298348.1"
                     /translation="MNIFRRFGAVLGAVRLAVVLVLLGAATACSADSTSLPTSPAVLH
                     TAKGDFSFTVELADTDATRERGLMFRSSLAPDAGMLFDFQHEELAQFWMQNTLIPLDM
                     VFIGEDGTVKSIHVNARPMDTTTIPSGVPVRFVLEIAGGRSEEIGLKVGDKFQQARVG
                     TPMDQ"
     gene            complement(9132..9737)
                     /locus_tag="VHZ56_10020"
     CDS             complement(9132..9737)
                     /locus_tag="VHZ56_10020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX4298349.1"
                     /translation="MAAKLPAGGDKPGIASLESGASVGDAGTTLDVIEISGAIKWFDV
                     AKGFGFIVPDDGRPDVLLHVTCLRRDGYQTAYEGARVIVEALNRPGGLQAFRILSMDE
                     STARHPAQMPAPRTHVTVEPTSRLERLEVKWFNRIRGFGFLSAGDGAPDVFVHMETLR
                     RFGITELRPGQFVLVRYGTGPKGLMVAEIRPDGWGDAPSSH"
     gene            9937..10353
                     /locus_tag="VHZ56_10025"
     CDS             9937..10353
                     /locus_tag="VHZ56_10025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018095031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX4298350.1"
                     /translation="MKYLHTMVRVADIDESKRFYCDGLGLREVRRSDNDKGRYTLVFL
                     AAPGDGGGEVELTFNWDPEVYTGGRNFGHLAYLTDDIYALCRHLMDMGITINRPPRDG
                     HMAFVRSPDGVSVELIQNGTLPPAEPWLSMPNTGKW"
     gene            10557..11006
                     /locus_tag="VHZ56_10030"
     CDS             10557..11006
                     /locus_tag="VHZ56_10030"
                     /inference="COORDINATES: protein motif:HMM:NF019896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-Ala-D-Ala carboxypeptidase family
                     metallohydrolase"
                     /protein_id="HEX4298351.1"
                     /translation="MRRLLFALCSALTLSACALSPPRDLYDGYSVNFGMYTANSGVDT
                     FCFVPQLRLALLSIESHFGRKVVVTSGYRDPIHNIIVGGKGESYHMRCMASDIFIPGI
                     DKSRLIAFAYSNPLIGGMGCYPGQGFVHIDVRQRPPGWTHPVTFSGC"
     gene            11069..11143
                     /locus_tag="VHZ56_10035"
     tRNA            11069..11143
                     /locus_tag="VHZ56_10035"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:11102..11104,aa:Glu,seq:ttc)
     gene            11196..11270
                     /locus_tag="VHZ56_10040"
     tRNA            11196..11270
                     /locus_tag="VHZ56_10040"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:11229..11231,aa:Glu,seq:ctc)
     gene            complement(11301..11564)
                     /locus_tag="VHZ56_10045"
     CDS             complement(11301..11564)
                     /locus_tag="VHZ56_10045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298352.1"
                     /translation="MATALYIVIQSRGKWWVDFEGRAHGPHDSRETAALEARNQAQFM
                     AHMERPSEVLVPDNVGKYWVVWDSRNATAGVPQAVSPQTRTAA"
     gene            11903..13024
                     /locus_tag="VHZ56_10050"
     CDS             11903..13024
                     /locus_tag="VHZ56_10050"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX4298353.1"
                     /translation="MARGDVEETVLATGSLQASTVTDVGAQVSGTIQTLPLKLGDTVK
                     AGDLIAQIDSTNQQNDVKSAQAALASLQAQLDSKQTDLTTAQSGLDRANQLQQKNLLS
                     AADQETAQSTLATAAAAIAVLKAQISQAQIAVDNANLALSRTKITAPVDGTIVAVLVT
                     PGQSVNANQTTPTIVKIADLDTMVIKAQISEADVTKVKPGQSATFTILGDAGGKIPAT
                     LTSIEPAPDAIDTSDTGLSTTDNAIYYNGLFTVANPDHKLRIAMTAQVTIVTDSAKNV
                     LTVPASALGNPGRNGSYHVAVYDPATRQMHPAQVKVGLDNNILAEVTSGLNEGDLVAT
                     GRPSAGAGGTAPTAGGRPGGAFGGAGGLFGGGGGARRGG"
     gene            13027..14979
                     /locus_tag="VHZ56_10055"
     CDS             13027..14979
                     /locus_tag="VHZ56_10055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010974437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MacB family efflux pump subunit"
                     /protein_id="HEX4298354.1"
                     /translation="MATPLISLRGLTRRFATGGDSVTVLDTVNLDIQAGEMIAIIGAS
                     GSGKSTLMNIMGCLDKPTEGIYEFAGRDVGKLDPDELAELRREHFGFIFQRYQLLADL
                     NAVENAAMPAIYAGLNNGARTRRATDLLTRLGLADRLRNRPGALSGGQQQRVSVARAL
                     MNGGDVILADEPTGALDSHSGAELMALLKELNAEGHTIIIVTHDPAIARQTDRMIEIS
                     DGHIIGDTRIDKPAGPAAGAETIIARRRGAMQAIDRSVEATRMALRAMGAHKLRTFLT
                     MLGIIIGIASVVSVVALGQGSQQAVLENIASIGTNTINIYPGTGFGNRDQGRIRTLLA
                     TDADAIATQSYADSVTPRVSTNQSILFNDVAVNAQVSGVGADYFRVSGSTISAGAAFA
                     QPDVDQRAQEAVIDSNAQAAIFTHGENPIGQVIVLGNVPVRVIGVVQNAATFGPGSSN
                     PSIYVPYTTVMDRILGQHYLSQITVRVADSADMDTAQSQITDLLTRLHGGKTDFFLQN
                     TNTIRDTIQSTSQTLTLLISAIAVISLIVGGIGVMNIMLVSVTERTREIGIRMAVGAR
                     RGDIMRQFLTEAVLVCIVGGVAGILVSFALGFGLTQFLSGARLSYSTLSIVAALASST
                     LIGVAFGFMPARAAARLDPVQALARE"
     gene            complement(14983..15720)
                     /locus_tag="VHZ56_10060"
     CDS             complement(14983..15720)
                     /locus_tag="VHZ56_10060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FadR/GntR family transcriptional regulator"
                     /protein_id="HEX4298355.1"
                     /translation="MRALPGRPSTHQYQTTTPARSHTARVVNDLGEAIVSGRQQEGSL
                     LPGDLEMSGRYGVSRTVLREAVKTLSAKGLLQSKARIGTRVRNRGDWNLFDSDVLVWH
                     ARSGFSADFLLHLGEMRLALEPEAAALAALRRTPEQLARIWAWADQMGDPDILPQDFV
                     LADLGLHLAIAEAANNPFFLSISTLIEVALVAMLTMSSPVENRQRLALSVAHHRAIVA
                     AIEAGDAATARVAMQRVVQKGIDGTRS"
     gene            15915..>16324
                     /locus_tag="VHZ56_10065"
     CDS             15915..>16324
                     /locus_tag="VHZ56_10065"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX4298356.1"
                     /translation="MASFQTRQVGRTALRITELAFGSASIASNFVDVPDEQARATVAA
                     VLDSGINYVDTAPQYGLGRGEHLVGDVLRDRRSGIVLSTKVGGLLKPSDDKASRGTWV
                     RPFPFEIVYDYSYDAIMRSFEDSLQRLAVAGIDIL"
BASE COUNT         2791 a         5756 c         4989 g         2788 t
ORIGIN      
        1 gcgccgatgg tcacgatggc gcccgagtgg aactccagca cgccgtggat cgtcgtcggc
       61 gtcccgacct tgatgtgcgt gcccttgtag gggccctccg ccgtcacctc gcgcgtcgcc
      121 cgcgccatgc tggtgaacgc cgtgacccgc ttgaccggac cgatgagctg gatgaggtcc
      181 gtaacgtagt acggcccgat gtcgagcacc ggaccggcgc cgacctggaa gaagaagtcc
      241 ggattgggat gccagtgctc catcccccgg ctcatcacgt gcgtcgtccc cgaagtgatc
      301 cgtccgagct tgccgccgtc gatcaggtcg cgaacctgct ggtgggcgcc gccgaggaac
      361 gtgtcgggcg ccgagccgac cctgagcttg cgctcgtcgg ccgccttctt cagtgccttg
      421 ccctcctcga gcgtcagcac gaacggcttt tccgaatagg cgtgcttgcc ggccgaaatc
      481 gcgtccatcg acacccggta gtgggtcgcg ggaatggtaa gattgacgac gacgtcgatc
      541 tcggaattct tcagcagctc gtccggcgtc tgcgccttga ccttgaattc ctcggcccgc
      601 ttcttggcgg cctcgggcag gatgtcggcc actgcacgca cctcgaggcc cttgaacagc
      661 ggcgcgagcc gcaggtacgc cgaggagatg ttcccggcgc ccatgatgcc gacgccatag
      721 gtcctggcca tgctcacatc cacttcttga cggattccat cgaccggcgg gcaaagcgca
      781 tcgcgtcgct gggcttgtcg tgttcggcga cgaggtactt cgccttggtc ttggccttga
      841 tcgtctgcag cagcgacttc cagtcgagcg tgccgtagcc gacatcggcc cagccgtctt
      901 cgtcgagcgc ctgcccggcc ggcgcgatat ccttgacatg caccgcagtg atgcggctgc
      961 ccagcttgtc catccaggcg accgggtctt cacccgcctt caccagccag gcgaggtcca
     1021 tctcccattc gagcgagggc agcgagccga gcaggatttc gatcggccgg cgcccatccg
     1081 cgagcttgcc gaattcccag tggtgattgt ggtagccgaa gcccactccg ccggcgttca
     1141 gcgccttgcc gatcgtggcc agcccctcgc ccagcttcac ccagtcgccc gtgccgttgc
     1201 ggtagtcgtc gctcggaggc gccgggcaat agatggtctt gatgccaacg gtcttggcga
     1261 tgttgaccgc tgccgcggta tcctcgagct gcttgtagcc gatatgcgcg gtcggcatcg
     1321 tcagccccgc cgccttcagg ctcgccgcca gccctgccgg atcggcgaac tggccgcccc
     1381 agccctcgac ctgcgtatag ccgagctgct tcagggattt gagcgtcgca tcgagcgacg
     1441 cctcgttgcg ggcgctgtag agctgaatcg aaaagtccat gtccgtgtct ttccaggatt
     1501 tgtacccgcc gcccgccggg tgggcgcggg ggtggtgtta gcgttcacac gccctatccg
     1561 aaccggcgcg atccgaaaag ggacgatgca ggcctagacg cgcagcccgc tccccgcgtc
     1621 gaacagcgaa gcccggcccg gatcgaaccc gatcagcacc ttcatgccgg tcaccaaatg
     1681 cacttcggcg gctgcgcgga aggtcagcgg ctggccgccg atcttggtcc aggcgatggt
     1741 gtccgatccc atcggctcga cgatctcgat ctcgctctcg acgctgaacg gcattttgcg
     1801 cgcgtcctcg cccagcgcca catgctccgg ccgcaccccc agcaccacat ccgtgccgtc
     1861 gctcgcgctg ccgaccgggt agctcgcgag cggcacgctg acgccattga gcgcgacgct
     1921 cccgccaccg agcttgccat gaaagaagtt catggtcggc gacccgatga acccggcgac
     1981 gaacaggttc tttggcttgt tgtagatggt gtgcggatcg tccagctgct ggatcacccc
     2041 gtcgcgcatg atggcgatcc ggtcggccag cgtcatcgcc tcgacctggt cgtgggtcac
     2101 gtagatcatg gtgtttttca gccgctggtg cagccgcttg atctcgaccc gcagttccga
     2161 gcgcagcttg gcgtcgaggt tgctgagcgg ttcgtcgaac aggaacacgc ccacctcgcg
     2221 caccagcgcc cgcccgatcg ccacgcgctg ccgctggccg cccgacagat tcgcgggctt
     2281 gcggtcgagc agcggaccga tctgcaggat ttccgaggcc cggccgacgc gccgcttgat
     2341 ctcgtccttc ttgaccccag cgacctgcag cccgaacgac aggttcttct ccaccgtcat
     2401 ctgcggatag agcgcatagg actggaacac catgccgatg ccgcggtcct tgggctcttc
     2461 ccaggtgacg ttcttgccgc cgatgaagat ctgcccgcca ttgatgtcga gcagcccggc
     2521 gacggcgttg agaagggtcg acttgccgca gcccgagggt cccagcaaca cgagaaactc
     2581 gccgtcctcc gccgtgacgt tgagcttttg cagcaccttg acggcgccga agctgatgtc
     2641 gaggtcgcgg acctgtactt gtgccatggg gtcagccctt cactgcgccg gccgcgatcc
     2701 cgcgcacgaa ccaccggcct gaaacgaaat agatgatcag cggcacggcg gccgcttcga
     2761 tggtcgccgc catgttgacg tcgtattgcg ggatgccctg cgtcgtcttg acgatgttca
     2821 gcaactgcac cgtcatcggc cagttggaac gcccggcgta gatcaccccg aacaggaaat
     2881 cgttccagat accagtgact tggaggatca gtgccaccgt ggtgattggc accgacatcg
     2941 gcagcatgat gtagaagaac gtctgccaga aattcgagcc gtcgacccgc gacgccttga
     3001 acaactcgat gggaatgctg gcgtagaaat tgcggaacag cagcaccagc accggcatgc
     3061 cgaagatggt gtgcaccgcg atgatgccgc ccagcgtcga gaacagatgc accgtcctca
     3121 gcccgatgat gaccgggtag atcaccacct ggtacggcac gaaggccccg aagatcagca
     3181 gcccgaagaa gaaattggcg cccttgtagt tccagaacga cagtgcgtag ccggtgagcg
     3241 tcgacacccc gatcgacacg atcaccgccg gtaccgtgat cttcaccgag ttgaagaatc
     3301 ccgggctgag gcccgagcag tcgccgccgg tacaggcatg tagccaggcg tcgatccagg
     3361 gctggacggt cggatgcaga ggcggcgaca ggacgttgct cgacaggatc tccggcatgt
     3421 ccttgagcga cgtgatgatc atcacgtaga ccggaacgag gaagaagatc gccgagatca
     3481 cgaggaatgc gtacaggccg atccggccga tggtgaggcg cttcggtttg ggcccgcttg
     3541 ggtcggtcgt cgcgcgcacg ctcatatcca tagccaccgc gctcatgccg taaccacctt
     3601 ccgcttcctg aggaatctat agacgcccac gcagatgagc acgatcacca caggcaagag
     3661 catcgtcgtc gccgcggcca tgccctgggc gacgttctgc cggtcggtga ggtactggag
     3721 cacgtagacg gccggcatca tcgtcgcgtt gcccggaccc gctcccgtca tcgacacgat
     3781 gagatcgtag acacgcagta cgttgatgca ctggaaggtc accgcggtcg cgacggcccc
     3841 gcgcatcatc ggcagcgcga tgaaaaggta cgtccgccac gccggaatgc cgtctacgcg
     3901 ggctgccttc cagatttcgc cgtccacgcc gcgcaggcct gcgagcagca cggccatggt
     3961 gacgccggca ccctgccaga cgccggcaac caccagcccg tagagcgcgg tgttggcgtc
     4021 attgagcggc gagaagtgga agctcgtcca gccgaaaccg tgcatcgtgg cgtcgaggcc
     4081 gtaattgggg tccagcaccc attgccagac gaggccggtc acgatcagcg acatcgcgaa
     4141 cgggtagagg aagatggtgc gcagcaggtc ttcctgcttg atgcgctggt ccatgaagac
     4201 cgcgagcagg tagccgaaca ccaaattcgc ggcgatcgac aggaagccga acagccagat
     4261 gttcttgacg gcggtcagcc agatgtcggt ggtccatagc cgctgatact gcttgagccc
     4321 gacgaattta tagtcgggaa agaccactgt gttggtgaag gagaaataga ccgacagccc
     4381 gatcccgaag atatagaccc cgaccgactc gatcatcagc gggatggtcg cgatgatcgc
     4441 cgcgatcgga agtttttttc tggtccgctc tgccatcgtc cgtgcccccc atggtgcgga
     4501 tgcggtgcgt cgttggaagg attgtggccg catcggcggt cccggagtca caacggccga
     4561 gatgccgccg cgcaagcccc cgacgcacgc tccccacgcc gccagtagag aagaggcgct
     4621 gcctgtccgg cagcgcctcg cattgctgac gcttagttcg cgttcttgag gatgttcacg
     4681 tagtcggcct gcgcctggtc gacggtgtag ctcgcgtcgt tgaagaactt cgtgaacaga
     4741 tcgttcatct ggttcgtcgt gtcgttcgac agccagcggc tgacgtcggt gacgacctca
     4801 tccggatggt tgttgaagat atccagcgcc ttctggaggc acggatcggc tgctcccatg
     4861 tcgacgtcgg aacgaaccgg cgacgagccc ttggcgttgt tgaacgccag ctggaccgcc
     4921 ggggagatca ggaggttggc gagacgcttc tgcgccgctt ccttgtccgg gtcggtctgc
     4981 ttggggaaca cgaacacgtc gccgctggtc gaggccgtcg ggtgggcgtc atcgaaaccg
     5041 gcgatgcagc catagtcctt gtcgcccact tcgcccttgg cggcaaactc gccgcgctcc
     5101 cagtcgccca tgatctgcag ggcggccttg ccggaatcca ccagtttcca ggtgtcgttc
     5161 cagttgcggt tcgcatagcc gtcgtcggcg tactggcgca gcgacttgaa gtcggtgagc
     5221 agctgcttga acttcgcacc gccagcgata tcgatgtcct tgtcgtgcag gaccttatcg
     5281 cggtcggcgt gacccagctc ttcgaccatg atcaggttga aggcgcccac gatctgccag
     5341 ccgccgccgt cgccgccgac ggcgaacgga atgatgcccg ccgctttcag cttcggagcg
     5401 tcagccagga agtcctggaa gttgtgcggg tcaggcaggc cggccgcctt gaaagcggcc
     5461 ttgctgtacc aggcccagtt ccacgaatgg atattgaccg gcacgcacca ccaatggcca
     5521 tcgaccaggc agccttccga cacttcgtgc ggacggatga ccttctccca gttgccggcc
     5581 gtggcgagat ccgtgagatc gaggagcaaa ttgttcttga tcagctcttc gtattcacgg
     5641 cccgggttga actgcgaggc gcccggtggg tcgccaccct gaatgcgagt catatcggtc
     5701 gaacgcgccg tgtcgccatc ggcgatggcg tcgtccaccc acttgtcgcc cgcgccatcg
     5761 ttgttgaagg cgtcacggaa cgtatgcacg gccgcagtct cgcccgggga cgtccaccag
     5821 tggatgacct ccaggtcggt cgcgtgcgct gacgtggtca gcatcaaact ggccgccgcg
     5881 agggcgacca aagacaatct attcataagt tgtcctccca acgttgaccg gaagcggatg
     5941 ctccggcccc tgccgtcagc ctggcggcga ccttcttgaa gaggtctccc ggccggcaac
     6001 atgtaatcga ttacacgaaa cctccacgag atcgatgcaa tcgattgcag gagtttcagc
     6061 cagttcttgc gcgcctgtca agatcgaatt agacaggcac cgaaccaagc ggccgaaggg
     6121 gcgccgtcga ccgatggaca ccggccggaa acaaccgaca attcaagacg ttgcgcggca
     6181 tgctaaagtg tccgctgcaa ccgtgagccg tgtcctcagc gcccctgagc gggtctcgga
     6241 agcgacgcgc gagcgggtcc acctcgccgt cagcgacacc ggctacacga tcaaccaggc
     6301 ggcccgcacg ttgcgcctgc aaagggcccg gacgattctc gccgcgatgc ccggaatcgg
     6361 caatccgttc tactcgacca tcctcgaggc ggtggtgacc gaggccacca gccgcggcta
     6421 cggcgttctc gtcaccggcc ggctcggcga cgacccggcg cgctggctct cggactattt
     6481 cctctccaat cgcgccgacg gcctgctgct gttcgacggc ttcctcgata cccatcgcct
     6541 gcatgccgtc accggcgagg gctcgtcgct gccgctggtc gccgcctacg acgaattgcc
     6601 cgacccccgg atcaattcgg tcatcaccga caatctccag gccgccgaac gggcggtgca
     6661 gcaccttgtg gactgcggcc accggcgaat cggccacatc agcgggcctt cgcgcaacac
     6721 cttccccaac gagcgcgtgg tcggtttccg caaggcgatg cgcgaacacg ggctcgagat
     6781 ccgcgaaaac tggatctttg ccggggatta ctcgatgcag agcggccgct ccgccgccgc
     6841 gcatttcgcg gcccaaagtg aattgcccac cgccgttttc tcggccaacg acgagatggc
     6901 gatcggcctc atggccacct tccgcaagct cggcatcgaa tgcccgcgcg acatctcgat
     6961 catcggattc gacgacatcg gcgtcgccga aaactatgcc ccggcgctga ctacgatgcg
     7021 ccagccgcgc gagcagatcg gccgcatggc tgccgaaatg ctcatcaaca tcctcgagca
     7081 caacgtcgcc agcccggctc ccctccgtgt cgttctgcaa tcggaactga tcgttcggga
     7141 cagcactgcc ccgccgcccg ccgtgacggc accggtggaa ccggctaaag ggagcgtcac
     7201 ggccccgtag ctcagcggat agagcagcag ccttctaagc tgttggtccc aggttcgatt
     7261 cctggcgggg tcgccagcgc ccgtcagccg ccggattccg cgagtttctt gagccgcggc
     7321 agcacatcgt cctgccagcc gcgggcgagc gcctcgtaga actcttccat ggcctcgcgc
     7381 tcgaaatcgt cccagccgtc gtggatgacc cgcacgaagg tccgatccgg cccgtccggc
     7441 gacaggtcga gttgcaccat cgtcttcggc gtgcccggca ggtaccagga aaacgcgaac
     7501 ttggtcggct cctcgagaag cagcacgtcg caccaggtcg cgccttcggt atcgcgggcg
     7561 gcccggcggg ccggatcctg ctgcatgaag aacgtcgtgc cgactgccgc cttgtagtct
     7621 atcgcgccga gccagcccgc cacggtcgcc tcgccggtcg cgacctgcca gaccttatcc
     7681 atcggcgcgg caatcgaaat ttctgccacg atcggcaaca gcggttcgct catctcggct
     7741 cctgagtcct acccaccgac aacgcggcag cgccagcctc gttcaccggc ggcgacatcc
     7801 cgcgcattcg cgagcccagt cgcgccattt ccggcttgtt catgatccgg ctaaaatccc
     7861 ggcccatgtt aaggcttgtt ccgttgccgg ctcgcatgct gaagccgagg aggaggcggt
     7921 gaagatgccc gctcgtgatg ccgaagtccg cccctggtgg ttcaaccccc gcccgttctc
     7981 gatggccgaa ctggtcgccg acggcattgt ccacggcatc ggcattgttt tcgcaatcag
     8041 cctcggcacg gtgctggtcg tctttgccgc catcggcacc gcccggcccg agttgcccgc
     8101 catcatcatc tatctgctga cgctgctgat tgtcctcgga gtgtcgctgg ccttcaacct
     8161 ggcgcccata tccggcttca agaaggtgat ggcgcggctc gaccaggcgg cgatcttcct
     8221 gttcatcgcc ggcacctaca cgccgttcct cgcggtcctc tccggcactc ccggcatcga
     8281 cctgatgtac gtgctggtct ggggcgccgc catcgtcggc atcgctctca agctgatcgt
     8341 gccacagcgc ttcggccggc tggccctgct gctctatctc gccattggct ggagtggcgt
     8401 tctcgtcttt cacgcgctgg cggccaccct ccccccggtg accctctggc tgctcgtcgc
     8461 cggcggcatc acctactcgg cggggatcgt cttccacctc tgggagcggc tcaagttcca
     8521 gaacgtgctg tggcatgtct tcgtcgtcgc gggagcgatc tgccacctct gggcgatctt
     8581 cgactgcatg gtgctgagcc ggctctgacg gcgggcgagg ctactggtcc atcggggtgc
     8641 ccacccgcgc ctgctggaac ttgtccccca ccttgagccc gatttcctcg gaccgcccgc
     8701 ccgcgatctc cagcacgaac cgcaccggca cccccgacgg gatcgtcgtc gtgtccatcg
     8761 gccgggcatt gacgtggatg gatttcaccg ttccgtcctc gccgatgaac accatgtcga
     8821 gcgggatcag cgtgttctgc atccagaact gggccagttc ctcatgctgg aaatcgaaca
     8881 gcattccagc atccggtgcc agcgacgagc ggaacatcag gccccgctcg cgcgtcgcat
     8941 cggtgtcggc aagctcgacg gtgaagctga aatcgccctt cgcggtatgc agcacggcag
     9001 gactggtcgg caggctcgtg ctgtcggcgc tgcaggccgt cgccgcgccg agcaggacca
     9061 gcacgacggc caggcgaacg gcccccagga ccgcaccgaa ccgtctgaaa atattcatga
     9121 aatcgacagg cttagtgcga cgatggggca tcgccccagc cgtccggccg gatctcggca
     9181 accatcagcc ccttgggtcc ggtcccgtag cggaccagca cgaactgccc tggccgcagc
     9241 tcggttatcc cgaaccggcg cagcgtctcc atgtgcacga acacatccgg cgcgccgtcc
     9301 cccgccgaca ggaagccaaa gccgcggatg cggttgaacc acttgacctc gagccgctcg
     9361 agccggctgg tcggctcgac cgtcacgtgc gtgcgcggcg ccggcatctg ggccggatga
     9421 cgcgccgtcg actcgtccat cgacaggatg cggaacgcct gcagtccacc cgggcggttc
     9481 agcgcctcga cgatgacccg ggctccctcg tacgccgtct ggtagccgtc gcggcggagg
     9541 caggtgacgt gcagcagcac gtcgggccgg ccgtcatcgg ggacgatgaa gccaaacccc
     9601 ttggcgacgt cgaaccattt gatggcgccg ctgatctcga tgacatcgag cgtggtgcca
     9661 gcatcaccta cgctcgctcc gctctcaagc gaagcaatac cgggcttgtc gccaccggct
     9721 ggaagtttgg ccgccatgcc cccaaacgcc tctttgcaca ccgccccgcc gcaagcgggg
     9781 tacgcgatcg ttggactcac cttggccgat tcaaattcaa aagttaagga gtccttgcaa
     9841 gatagttggg aagcgcccgc gccaattcgc atgcactgtt gcgccaatgg cgcagagggg
     9901 tgcgagaccc ctgtgaacac tgaggagagc aaaccgatga agtacctcca caccatggtg
     9961 cgcgtcgccg atatcgacga gagcaagcgc ttctactgcg atggcctcgg cctgcgcgaa
    10021 gtgcgccgca gcgacaacga caagggccgc tacaccctgg ttttcctggc cgctccgggc
    10081 gacggcggag gcgaggtcga gctcaccttc aactgggacc cggaggttta taccggcggt
    10141 cgcaacttcg gccacctcgc ctacctgacc gacgacatct acgcgctctg ccggcacctg
    10201 atggacatgg gcatcaccat caaccgcccg ccccgcgacg gccacatggc cttcgtgcgg
    10261 tcccccgacg gcgtctcggt cgagctcatt cagaacggca ctctgccgcc ggccgagccc
    10321 tggctgtcga tgcccaacac cggcaagtgg tgactccctg cggttggacg ggcggcgcct
    10381 ctcggcgccg cccggacaga gcggcctcat acttcggttg gacgagcggc gcctctcggc
    10441 accgcccgga cagcgccctt aggagctcgt tcaccacgcc gcttagcgcc gggttcaccg
    10501 tgattgccta gcattggttc cgacagccgc cgcggcggcg cccccggaac catgcgatgc
    10561 gacgactgct tttcgcgctc tgcagcgccc tcacgctgag cgcctgcgcc ctctccccgc
    10621 cgcgcgatct ctacgacggc tattcggtca acttcggcat gtacaccgcc aacagcggcg
    10681 tcgacacctt ctgcttcgtg ccgcaactgc ggttggcgct cctcagcatc gagagccatt
    10741 tcggccgcaa ggtcgtcgtc acctccggct atcgcgaccc gatccacaac atcatcgtcg
    10801 gcggcaaggg cgagagctac cacatgcgct gcatggcctc cgacatcttc atccccggca
    10861 tcgacaaatc gcggctgatc gcgttcgcct attccaaccc gctgatcggc ggcatgggct
    10921 gctatccggg ccaggggttc gtgcacatcg acgtccgcca gcgcccgccc ggctggaccc
    10981 accctgtcac cttctccggc tgctgagcgc cgcccgtttg ccgcttgcac gccggggggc
    11041 aggcctctat agaccgccct cgccggaggc gcccatcgtc tatcggtcag gacgccaccc
    11101 tttcacggtg gagagagggg ttcgattccc cttgggcgca ccagccgccg cggcattgac
    11161 gcgccgcgcc gaaccttggt aactgcaccg tcgccgcgcc catcgtctag cggtcaggac
    11221 accgccctct cacggcggga acaggggttc gattcccctt gggcgcgcca atccccacca
    11281 gcctggaatc ttgagccgcc ctatgcggcc gtccgcgtct gcggactcac tgcctgcggt
    11341 acgcctgcgg tggcgttgcg gctgtcccac acgacccagt atttgcccac attgtcgggc
    11401 accagcactt cgctcggccg ctccatatgc gccatgaact gcgcctggtt gcgcgcctcg
    11461 agcgccgccg tctcgcgcga atcatgcggg ccgtgagcgc gaccctcgaa gtcgacccac
    11521 cacttcccac ggctttgaat tacaatgtaa agcgccgtcg ccacgccaag tccgccgaac
    11581 cccaacgcag tcaagctaac atcaacgacc gcaccgggga gcggcgccgc gggttacaca
    11641 caggacgatt gcatctgtgc acaggcaggc gcggccgcag cttacgaaag cttatgctag
    11701 attacccatc gataatgtta caatcggctg gcgctgaccc atattccaga gtgcgggggt
    11761 ccttatggac accaggtggg tcgaaatgag aaaactgttc atacgcgtcg ccgtggcgct
    11821 ggttctgctt ggcggagccg gcatcgcagc ctggctggtc tacgcgccct cgcaggcggc
    11881 agtatagcct gcgaccgtgc aggtggcacg cggcgacgtc gaggagacgg tgctggccac
    11941 cggctcgctc caggccagta ccgtgaccga tgtcggggcg caggtctcgg gcaccatcca
    12001 gacgctgccg ctgaagctcg gcgacaccgt caaggccggc gacctcatcg cccagatcga
    12061 ttcgaccaac cagcagaacg acgtgaagtc ggcgcaggcc gccctcgcca gcctgcaggc
    12121 ccagctcgat tccaagcaga ccgacctgac gaccgcgcag tcgggcctcg atcgcgccaa
    12181 ccagctgcag cagaagaacc tgctgtccgc cgctgaccag gagacggcgc aatcgacgct
    12241 ggccacggcg gccgcggcga tcgccgtgct caaggcccag atcagccagg cccagatcgc
    12301 cgtcgacaac gccaacctcg ctttgtcgcg caccaagatc accgcgcccg tcgacggcac
    12361 catcgtggcg gtgctcgtca cccccggcca gagtgtcaac gccaatcaga cgacgccgac
    12421 catcgtcaag atcgccgacc tcgacacgat ggtcatcaag gcccagattt ccgaggccga
    12481 cgtgaccaag gtgaagccgg gacagagcgc caccttcacc atcctcggcg acgccggcgg
    12541 caagatcccg gccacgctga cctcgatcga accggccccc gacgccatcg acacctccga
    12601 caccggcctc tccaccaccg acaacgccat ctactacaac ggcctgttca ccgtcgcgaa
    12661 ccccgaccac aagctgcgca tcgccatgac cgcgcaggtg accatcgtca ccgactccgc
    12721 caagaacgtg ctgaccgtcc cggcttcggc gctgggcaat cccggccgca acggctccta
    12781 ccacgtcgcc gtgtacgacc cggcgacccg ccagatgcat ccggcgcagg tcaaggtcgg
    12841 gctcgacaac aacatcctcg ccgaggtgac cagtggcctc aacgagggcg acctcgtggc
    12901 gaccggccgc ccctcggccg gtgccggcgg cacggccccg acggccggcg gccggcccgg
    12961 tggagcgttc ggcggcgccg gcggcctgtt cggcggcggc ggcggtgccc gccggggcgg
    13021 ctgaccatgg cgaccccgct gatctccctg cgcggcctga cgcgccgttt cgccaccggc
    13081 ggcgacagcg tcaccgtgct cgacaccgtc aacctggaca tccaggccgg cgaaatgatc
    13141 gccatcatcg gtgcctccgg ttccggcaag tcgacgctga tgaacatcat gggctgcctc
    13201 gataagccga ccgaaggcat ctacgagttt gccggccgcg acgtcggcaa gctcgacccc
    13261 gacgaactcg ccgagcttcg gcgcgagcat ttcggcttca tcttccagcg ctaccagctg
    13321 cttgccgacc tcaacgccgt cgaaaacgcg gcgatgccgg cgatctacgc cggcctcaac
    13381 aacggcgccc gcacccggcg cgccaccgac ctgctgaccc ggctcggcct ggccgaccgg
    13441 cttcgcaacc gccccggcgc cctctccggc ggccagcagc agcgcgtctc ggtggcccgg
    13501 gcgctgatga acggcggcga cgtcattctc gccgacgagc ccaccggcgc cctcgattcc
    13561 cacagcggcg ccgagctgat ggcgctcctc aaggagctca acgccgaggg ccacacgatc
    13621 atcatcgtca cccacgatcc ggccatcgcc cgccagaccg accgcatgat cgagatcagc
    13681 gacggccaca tcatcggcga cacccgcatc gacaagccgg ccggccccgc cgctggcgcc
    13741 gaaacgatca tcgccaggcg ccgcggcgcg atgcaggcca tcgaccgcag cgtcgaggcg
    13801 acgcgcatgg cgctccgggc gatgggcgcg cacaagctgc gcacgttcct caccatgctc
    13861 gggatcatca tcggcatcgc ctcggtagtg tcggtcgtgg ccctcggcca gggcagccag
    13921 caggccgtgc tcgagaacat tgcctcgatc ggcaccaaca ccatcaacat ctatcccggc
    13981 accggcttcg gcaaccgcga ccagggtcgc atccgcaccc tgcttgcgac cgacgccgac
    14041 gccattgcca cccagtccta cgccgacagc gtcaccccgc gcgtctccac caatcagtcg
    14101 atcctgttca acgacgtcgc tgtgaacgcc caggtcagcg gcgtcggcgc cgattacttc
    14161 cgggtcagcg gctcgaccat ttccgccggc gctgccttcg cccagcccga cgtcgaccag
    14221 cgtgcgcagg aagcggtcat cgactccaac gcgcaggccg cgatcttcac ccatggcgag
    14281 aacccgatcg gccaggtgat cgtcctcggc aacgtgccgg tgcgggtgat cggcgtcgtg
    14341 cagaatgccg cgaccttcgg ccccggcagt tccaacccga gcatctacgt cccctacacc
    14401 acggtgatgg atcgcatcct cggccagcac tacctgagcc agatcaccgt ccgcgtcgcc
    14461 gacagcgccg acatggacac cgcccagagc cagatcaccg acctgttgac gcggctccat
    14521 ggcggcaaga ccgacttctt cctgcagaac accaacacca tccgcgacac catccagtcg
    14581 accagccaga cgctgaccct gctgatctcg gccatcgccg tgatctcgct gatcgtcggc
    14641 ggcatcgggg tgatgaacat catgctggtg tcggtcaccg agcgcacccg cgagatcggc
    14701 attcgcatgg ccgtcggcgc ccggcgcggc gacatcatgc gccagttcct caccgaagcc
    14761 gtgctggtgt gcatcgtcgg cggtgtcgcc ggcatcctgg tgagcttcgc actcggcttc
    14821 gggctgacgc agttcctctc gggcgcgcgg ctttcctact cgaccctctc gatcgtcgcg
    14881 gccctcgcct cgtcgaccct gatcggggtg gccttcggct tcatgccggc gcgcgccgcg
    14941 gcacgtctcg acccggtgca ggcgctggcg cgcgagtagc cgctagctac gcgttccgtc
    15001 gatgcccttt tgcaccaccc gctgcatcgc gacgcgggcc gtcgcggcgt cccccgcctc
    15061 gatcgctgcc acgattgccc ggtggtgggc gaccgagagc gccagccgtt gccggttctc
    15121 caccggcgac gacatcgtca gcatggcgac cagcgcgacc tcgatcaggg tcgagatcga
    15181 caggaagaac ggattgttcg ccgcctcggc gatcgcgaga tgcagcccca gatcggcgag
    15241 cacgaaatcc tgcggcagga tgtcggggtc gcccatctgg tcggcccacg cccagattcg
    15301 cgccagttgc tcgggcgtcc ggcgcagcgc ggcgagcgcc gccgcttccg gctcgagcgc
    15361 cagccgcatc tcccccagat gcagcagaaa gtccgcgctg aagcccgacc gcgcatgcca
    15421 gaccagcacg tcggaatcga acaggttcca gtcgccgcgg ttgcgcacgc gcgtcccgat
    15481 ccgcgccttg gactgcagca gccccttggc cgagagcgtc ttcaccgctt cgcgcagcac
    15541 ggtgcgtgac acgccgtagc ggccgctcat ctccaggtcg cccggcagca ggctaccctc
    15601 ctgctgccgc ccggagacga tcgcctctcc caggtcgttg accacgcggg ccgtgtgcga
    15661 gcgcgccggc gtcgtcgtct ggtactggtg ggtcgagggt cgtcccggca aagcccgcac
    15721 ttccgtggtc cgcggccatc cggacgcccc ggcacgatta cccgtcggac cgccctgcgt
    15781 caaaggcaca ttcacccaga ccctggccct caaacgcgcc gcaattcgtc gcgctggacg
    15841 aaacgaggcc agcttgcctt tgcatcccgg caactaacat gtcagtttgt cgcccaacga
    15901 tagaggggcg acggatggcc agtttccaga cgcggcaggt gggacggacg gcgctcagga
    15961 tcaccgagct cgccttcggc agcgccagca ttgccagcaa tttcgtcgac gtgccggacg
    16021 agcaggcgcg cgccaccgtg gctgcggtgc tcgattctgg catcaactac gtcgacaccg
    16081 ccccgcaata tggccttggc cgcggtgaac acctcgtcgg cgacgtgctc cgcgaccgcc
    16141 gcagcggcat cgtgctgtcg accaaggtcg ggggactgct caagccctcc gacgacaagg
    16201 ccagccgcgg cacctgggtg cggccgttcc cgttcgagat cgtctacgac tacagctacg
    16261 acgccatcat gcgctcgttc gaggacagcc tgcagcgcct cgccgtggcc ggcatcgaca
    16321 tcct
//
LOCUS       DATAZA010000397         2566 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1907433, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000397 DATAZA010000000
VERSION     DATAZA010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2566
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1907433"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..152)
                     /locus_tag="VHZ56_10070"
     CDS             complement(<1..152)
                     /locus_tag="VHZ56_10070"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX4298357.1"
                     /translation="MPDNRIALVTGANQGVGLQVAKELVAHGLTVLVGSRNFERGEAA
                     ARSIGPG"
     gene            273..887
                     /locus_tag="VHZ56_10075"
     CDS             273..887
                     /locus_tag="VHZ56_10075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007817610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HEX4298358.1"
                     /translation="MTADSDGGGATTVPQGADKRVRADARRSLDALLQAAKTVFATSG
                     VDAPVREIADAAGVGIGTVYRHFPQRADLVAAVFRREIDACADAAPELAAAYPPFEAL
                     VKWLERFVGFIATKRGLAAALHARGVAYEGLPAHRNQRLVPALRGLLDRAVAAGEVRA
                     GVDAEDLLNAVGSLYMMVRDERAAESASRMLALMLDGLRYGVKG"
     gene            complement(884..1585)
                     /locus_tag="VHZ56_10080"
     CDS             complement(884..1585)
                     /locus_tag="VHZ56_10080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEX4298359.1"
                     /translation="MQIKVASYNIRKAVGLDWRRRPSRVLDVLNEVGADIVALQEVDR
                     RFGSRTTALDPELIARHTDYQAIRFSHRPQSLGYHGNVILARKSIHVAAARPMVLPHL
                     EPRGAAVADLELDGSPLRIVGMHLGLTRKWRQLQTETIVAELRALEANLPTVLMGDLN
                     EPDLKSGVLRAFELSHTIADCGPSFHASMPLFTLDRIIVTEGIAIAETGVHRTALSRE
                     ASDHLPIWARLTLPN"
     gene            complement(1685..>2566)
                     /locus_tag="VHZ56_10085"
     CDS             complement(1685..>2566)
                     /locus_tag="VHZ56_10085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl phosphate synthase large subunit"
                     /protein_id="HEX4298360.1"
                     /translation="MEHIEEAGIHSGDSACSLPPQTLSAEVIAELKRQTAQLALALKV
                     GGLMNVQYALKEGTIYILEVNPRASRTVPFVAKVIGLPIAKIASRIMAGESLESFHLV
                     ERKLNHIAIKEAVFPFNRFPGVDTVLGPEMKSTGEVIGLDTDYALAFAKSQIGSGSKV
                     PREGTVFVSVRDDDKPLIRTMMRDLEAAGFTIVATAGTYRYLHDNGISAAKVNKVAEG
                     RPHIVDAMKNGGVQLVINTTEGQKSISDSRDIRRTALMGKIPYYTTIPGAAAAVEGII
                     GLRHGNLTVRPLQEYFA"
BASE COUNT          387 a          761 c          965 g          453 t
ORIGIN      
        1 cccggcccga tcgaccgcgc cgcggcttcg ccgcgttcga aattgcgcga cccgacgagc
       61 acggtcaggc catgcgccac cagttccttg gcgacctgca ggccgacccc ctgattggcc
      121 ccggtcacga gggctatgcg gttgtccggc atcgtcgtct ccttgcggtt gtgtcggttg
      181 tcacggcggc ggcgaagcac tatctttgcg caagcggaac cgtgttccgg attagatacg
      241 gagcattgtt ccgctttgca aggggcaaga ttgtgactgc cgattcagat ggtggtggtg
      301 cgacaacggt gccgcaaggt gcggacaagc gcgtgcgcgc cgatgcccgg cgcagccttg
      361 atgcgctgct gcaggcggcc aagacggtct ttgcgacgtc cggcgtggat gcgccggtgc
      421 gggagattgc cgatgccgcc ggtgtgggca tcggtacggt gtaccggcac tttccacagc
      481 gcgccgattt ggtagcggcg gtcttccggc gcgaaatcga cgcgtgcgcc gatgcggcgc
      541 cggagcttgc cgcggcctat ccgccgttcg aggcactggt gaaatggctc gaacgctttg
      601 ttgggttcat cgcgaccaaa cgcggcctcg cggccgccct gcatgcccga ggcgtggcct
      661 atgagggcct gccggcgcat cgcaaccagc ggctggttcc ggccctgcgc ggtctgctcg
      721 accgtgcggt ggcggccggc gaggttcgcg ccggcgtcga tgccgaggat ctgctgaacg
      781 ccgtcggcag tctctacatg atggtgcgcg acgagcgtgc agccgagagc gcgtcacgca
      841 tgctggcact gatgctcgac gggctgcgct atggcgtgaa gggctagttc ggcagcgtca
      901 gccgggccca gatcggcagg tggtcggagg cctcgcgcga caacgccgtc cggtggacac
      961 cggtctcggc gatggcgatg ccctcggtga cgatgatgcg gtcgagggtg aagagcggca
     1021 tcgacgcgtg aaagctcggg ccgcaatcgg cgatggtgtg gctaagctcg aaggcgcgca
     1081 gcacgcccga tttgaggtcg ggctcgttga ggtcacccat gaggacggtg ggcaggttgg
     1141 cctcgagcgc acggagctcg gcgacgatgg tctcggtctg cagctgccgc catttgcggg
     1201 tgaggccgag atgcatgccg acaatgcgca acgggctgcc gtcgagttcg agatcggcca
     1261 cggcggcgcc gcgcggctcg agatgcggca gcaccatcgg ccgcgccgcg gcgacgtgga
     1321 tcgacttgcg ggcgaggatg acgttgccgt ggtagccgag gctctgcggg cgatgcgaga
     1381 agcgaatggc ctggtagtcg gtgtgcctgg cgatcagctc gggatcgagc gcggtggtgc
     1441 gggagccgaa gcggcgatcg acctcctgca gggcgacgat gtcggcgccc acctcgttga
     1501 gcacgtcgag gacgcgcgag gggcgacggc gccagtcgag gccgaccgcc ttgcggatgt
     1561 tgtaggacgc gaccttgatc tgcatgcggg atggggaacg gcggcaaagg tgggaaggtt
     1621 cacgctagcc ggacgaccgc agccggtcca gccgccgggc gcgccggcgt ggtcgtgagg
     1681 cggcttaggc gaaatactcc tgcagcgggc ggacggtgag gttgccgtgg cgcaggccga
     1741 tgatgccttc gaccgccgcg gcggcgccgg ggatcgtggt gtagtagggg atttttccca
     1801 tcagcgcggt gcggcggatg tcgcggctgt cgctgatcga tttctggcct tcggtggtgt
     1861 tgatgaccag ctgcacgccg ccattcttca tggcgtcgac gatgtgcggc cggccctcgg
     1921 cgaccttgtt gaccttggcg gcggagatgc cgttgtcgtg gagataacgg taggtgccgg
     1981 cggtggcgac gatggtgaag ccggccgcct cgaggtcgcg catcatcgtg cggatcagcg
     2041 gcttgtcgtc gtcgcgcacc gagacgaaca cggtgccctc gcgcggcacc ttggagcccg
     2101 agccgatctg cgacttggcg aaggcgagcg catagtcggt gtccagcccg atgacctcgc
     2161 cggtcgactt catctcgggg ccgagcacgg tgtcgacgcc ggggaagcgg ttgaagggga
     2221 acaccgcttc cttgatggcg atgtggttga gcttgcgctc gacgagatgg aagctctcga
     2281 ggctttcgcc ggccatgatg cgggaagcga tcttggcgat gggaaggcca atcaccttgg
     2341 cgacgaacgg cacggtacgg gaggcgcgcg gattgacctc gagaatgtag atggtgccct
     2401 ccttgagggc atactgcacg ttcatcaggc cgccgacctt gagggcgagt gccagctggg
     2461 cggtctgccg cttgagctcc gcgatcacct cggccgaaag cgtttgcggc ggcaatgagc
     2521 aggcgctgtc acccgaatgg atgccggcct cctcgatgtg ttccat
//
LOCUS       DATAZA010000398         2290 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_632215, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000398 DATAZA010000000
VERSION     DATAZA010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2290
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_632215"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..962)
                     /locus_tag="VHZ56_10090"
     CDS             complement(<1..962)
                     /locus_tag="VHZ56_10090"
                     /inference="COORDINATES: protein motif:HMM:NF014051.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEX4298361.1"
                     /translation="MNLRRQLLSQSTAIFGARLFGAGLTFLVQVAIARFLGGQVLGEY
                     ILVMATVNIVAVVMPLGFEATGTYFAAEYRARGEGRLLRGFMARAYGHVAACGLLLLL
                     AGYPVAGLFGEPGRVLASHWAPAAILCIATAMVFVSGAMLVGLKRPFAGFFAETLFRP
                     LLAIAGFVLAMTVLRGDSSLDVLLWVLGVGYAVVAVVQLLLLVATTRQIPLEATPRTG
                     EWRRWWHFAGPWIALVVAGDFFFDIDLLLLAGHLGKEELAIFGVCTRVFSLVSFGVGA
                     VYAVTMPDMFESEALKDRAGFHRKIGEANLVATGLSVALLVVVLA"
     gene            complement(959..2134)
                     /locus_tag="VHZ56_10095"
     CDS             complement(959..2134)
                     /locus_tag="VHZ56_10095"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4298362.1"
                     /translation="MSITADGLADGFSATAARSVSRGSGAVTAQVVSPELWDRTIAQF
                     DEVCQEQLYVFARSRWPRVAHEPVLFWQGGEVVGGSLMMIQPLPLHVGALAVAKWGPM
                     LARADHPQAADIYRQMIDLLVEDYAVKRRLMLSVLPRAALSPFNAEYDHLTHRGFARG
                     SELGFPNRYIVNLRLSDAEQRKSLLQKWRYHLNKSEKAGLGFEHAPAARLPEFEALYE
                     KMLDRKKFADHSAYETVSALMAMTNETLRPELFFVRHAGEVIAGAIIFKAGDRAVYLY
                     GATNDKALPLRAGYFMHWNIILWLRDNTPAKWYDLGGTDGFHGLHQFKKGMVGEAGVI
                     QPVPPVANYAAHWLPRLAGNAAFAARDGVQRLKREIDRRRADRAHPDQKRADADSAE"
BASE COUNT          412 a          835 c          720 g          323 t
ORIGIN      
        1 gccagcacca ccaccagcag cgccacggaa agtcccgtcg ccaccaaatt cgcctcgccg
       61 atcttgcggt ggaacccggc gcgatccttc agcgcctcgc tctcgaacat gtcgggcatg
      121 gtgaccgcat agaccgcgcc gacgccgaac gacaccagcg agaacacccg ggtgcagacg
      181 ccgaagatcg ccagctcttc cttgcccaga tggccggcga gcagcagcag atcgatgtcg
      241 aagaagaagt cgccggcaac caccagcgcg atccacggac cggcaaaatg ccaccagcgt
      301 cgccactcgc ccgtccgcgg cgtggcctcg agcggaatct gtcgcgtcgt cgcgaccagc
      361 agcagcaatt gcaccaccgc caccaccgcg tagccgacgc ccagcaccca aagcagcacg
      421 tcgaggctgc tgtcgccgcg cagcaccgtc atcgccagca cgaagccggc aatcgccagc
      481 agcggccgga acagcgtttc agcgaagaac ccggcgaacg gccgcttcag cccaaccagc
      541 atcgctccgg acacgaacac catggccgtc gcgatgcaga ggatcgccgc cggtgcccag
      601 tgggaagcca ggacccgccc cggctcgccg aacagtccgg ccaccggata gccggcgagc
      661 agcagcagga ggccgcaggc ggcgacgtgc ccataggcgc gcgccatgaa gccgcgtagc
      721 agccgtccct cgccgcgcgc ccggtattcg gccgcgaaat acgtgccggt cgcctcgaac
      781 ccgagcggca tcaccacggc gacgatgttc accgtcgcca tgaccaggat gtactcgccc
      841 agcacctggc cgccgaggaa ccgcgcgatg gcgacctgca cgaggaacgt cagtccggcc
      901 ccgaacagcc gggcgccgaa gatggcggtc gattgcgaga gcagctgcct gcggaggttc
      961 attcggcgct gtccgcgtcg gcgcgcttct ggtccgggtg cgcccggtcg gcgcggcgcc
     1021 ggtcgatttc gcgcttcagc cgctgcacgc cgtcgcgtgc cgcaaacgcg gcgttgcccg
     1081 cgaggcgcgg cagccagtgc gcggcatagt tcgccaccgg cggcaccggc tggattacgc
     1141 ccgcctcgcc caccatgccc ttcttgaact ggtgcagccc gtggaagccg tcggtgccac
     1201 cgaggtcgta ccatttggcc ggcgtattgt cgcgcagcca caaaatgatg ttccagtgca
     1261 tgaagtagcc ggcccgcagc ggcagcgcct tgtcgttggt cgcgccgtag agatagaccg
     1321 cgcggtcgcc ggccttgaag atgatggccc cggcgatcac ctcgcccgca tggcgcacga
     1381 agaacagctc cggccgcagc gtctcgttcg tcattgccat cagcgccgac accgtttcgt
     1441 aggccgagtg gtcggcgaac ttcttgcggt cgagcatctt ctcgtacagc gcctcgaact
     1501 cgggcagccg cgccgccggc gcatgctcga agccgagccc cgccttctcc gacttgttga
     1561 ggtggtagcg ccatttctgc agcaggctct tgcgctgctc ggcatcgctc agccgcagat
     1621 tgacgatgta gcggttggga aaccccagtt ccgagccgcg cgcaaagccg cgatgcgtca
     1681 ggtggtcgta ctcggcgttg aacggcgaca gcgcggcccg cggcagcacg ctcagcatca
     1741 gccgccgctt gaccgcgtag tcctcgacca gcaggtcgat catctgccgg tagatgtcgg
     1801 ctgcctgcgg gtgatcggcg cgagccagca tcggccccca tttcgccacc gccagggccc
     1861 cgacgtggag cggcagcggc tggatcatca tcaggctccc gcccaccacc tcgccgccct
     1921 gccagaacag caccggctcg tgcgccaccc gtggccagcg gctgcgggcg aagacgtaca
     1981 gctgctcctg gcagacctcg tcgaactgcg cgatcgtgcg gtcccacagc tccggcgaca
     2041 ccacctgcgc ggtgaccgcg cccgaaccgc gcgacacgct gcgcgcagcc gtcgcgctga
     2101 atccgtcggc gagaccatcg gcagtgatcg acatagggaa tttctcctgc atacggatgc
     2161 cgaaagtagg ccgtcccgca gcggaaatcc cttcagaaac aaggtaaatg cgacctaacc
     2221 cgaatgtagg gttaccaatt cacgccaccg atggcagctg cagccgcggc aggtccggca
     2281 gcgcgtcgcc
//
LOCUS       DATAZA010000399         4138 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2721170, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000399 DATAZA010000000
VERSION     DATAZA010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4138
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2721170"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(293..706)
                     /locus_tag="VHZ56_10100"
     CDS             complement(293..706)
                     /locus_tag="VHZ56_10100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011425088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity iron permease family protein"
                     /protein_id="HEX4298363.1"
                     /translation="MASRSPFSRFSHTIASLAGKPVTFAAAVLLILVWAVSGPIFHYS
                     ETWQLVVNTATTIITFLMVFVLQNTQNRDGEAVQAKLDELIFALKGADNHFVAAEKLS
                     DVELKKLRELLVTRAEATTRELHQRGEKPQPREIA"
     gene            800..2632
                     /gene="recQ"
                     /locus_tag="VHZ56_10105"
     CDS             800..2632
                     /gene="recQ"
                     /locus_tag="VHZ56_10105"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016733666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HEX4298364.1"
                     /translation="MASPAAQISLELRRDPADVLRDVFGHASFRGQQEAVIRHVTEGG
                     DAVVLFPTGAGKSACYQIPAICRPGVGIVISPLIALMRDQVEALRQVGVRAAALNSSL
                     APQEAELVRRQLLRGELDLLYVAPERLVTAGFQHLLAGVDISLFAIDEAHCVSQWGHD
                     FRPEYRELSRITELFPGVPRLALTATADAVTRDDIVERLGLGEARLFSASFDRPNISY
                     TIVERANQKKQLLDFLSRHRGDSGIVYCLSRNKVDEIAAWLTGEGIRALPYHAGMDAR
                     RRSANQDAFLKEETLCLVATVAFGMGIDKPDVRYVAHLDLPASIEAYYQETGRAGRDG
                     LPAEAWMSYGMADAAQRRRMIDEGNAPDAVKRVEHAKLNALLGVCETAGCRRQAILNH
                     FGEAHAGHCGNCDTCQSPVDSWDATDAVVKAMAAIYRTGQRFGAAHIVDVLLGKQTEK
                     VLRFGHEAQPVFGAGRDLAAKTWQSVLRQIAAAGLVAVDHERHGALVLGESARPVFRG
                     EQRITLRRDQPQRAAAVRRSLERSTGLPEAAVGLFEALRAERTRLAKLQGVPPYVIFH
                     DTTLRAIATARPSGLEALGELPGVGQAKLDRYGDAFLQIVAAHP"
     gene            2659..3759
                     /locus_tag="VHZ56_10110"
     CDS             2659..3759
                     /locus_tag="VHZ56_10110"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052689 - carboxylic ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactonase family protein"
                     /protein_id="HEX4298365.1"
                     /translation="MPRSLLFVGSCNRGLPYVPLTHGRGISAYDVDVETGAARLLEVF
                     EDIDNPTFLTVSPDGRSLYAASEMAGAVDGTITAFAIERATGGLTRLGARPSEGYTPA
                     HISLDPAGALVAAANYGDVAADKRPAGEAIVVYRRDPSGALSPVIARAAHGGSGPDRS
                     RQERPHPHCVGWTPDGRFLVVSDLGVDRLLIYRLTIGGLIAHGEVALPPGSGPRHFTF
                     HPNGRFAYVVTEMGSTVVSFAFDAGHAGFRLLDVASTIPAGARANTGAAIALTPDGRH
                     VLASNRGDDSVARLAIDAGGVARFTETTPSGGRTPRDFTFDPGGRLLAVANQNSDNVA
                     LFRYERSSGSLTPLASIGVGSPTVVAFYPDPA"
     gene            3761..>4138
                     /locus_tag="VHZ56_10115"
     CDS             3761..>4138
                     /locus_tag="VHZ56_10115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019856640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX4298366.1"
                     /translation="MPDHDLVIRNATLVDGTGGPPRRGDLAISGERIAAVGDVAGRAT
                     EEIDGSGLTLSPGFIDVHTHDDGALLADPRMTAKVSQGVTTVIIGNCGISLAPIAPLD
                     PPPPLNLLGDRSAFRFETMAAYLD"
BASE COUNT          633 a         1397 c         1461 g          647 t
ORIGIN      
        1 gtcgaggaat cggcaaacgc cggaacggca agaagcgtcg cgccgaccgc aagggcggcg
       61 atggaggtca gtctcgggat atgcatgatg gaaattgttt cctgttgttg acctggtgcg
      121 agtgaagccg ggaattgggg cgcccgtcaa cgcagcggcg ccgagggctt ccggcggcac
      181 agggcaagct cgcgccggac atcgatggat gtcgcggctt atggccggaa ttcgggagga
      241 atcggacttt gtttggggcc gcagcgtggc ccgcggcggg ctctgtcgct ggtcaggcga
      301 tctcgcgcgg ctggggcttt tcgccccgct ggtgcagttc cctggtcgtc gcttcggccc
      361 gcgtcacgag cagttcgcgc agcttcttca gctcgacatc gctgagcttt tcggccgcga
      421 cgaaatggtt gtcggcaccc ttgagcgcga aaatcagctc gtcgagcttg gcctgcaccg
      481 cctcgccgtc gcggttctgg gtgttctgca ggacgaacac catgagaaag gtgatgatgg
      541 tggtggcggt gttgaccacc agctgccagg tctcggaata atggaagatc gggccgctca
      601 ccgcccacac gaggatcagc aggactgccg ccgcgaaggt caccggcttg ccggcaagcg
      661 aagctatcgt atgcgaaaac cgggaaaacg gacttctgct ggccatgaaa gcgccctcca
      721 ctgctccacc ataacgagca gtgagcctta ggcgttccac cccttgcggc gcgggccccg
      781 gcctgatcca tagtcgggca tggcatcccc agcagcccag atcagcctcg agctccggcg
      841 cgacccggcg gacgtgctgc gcgacgtttt cggccacgcc agtttccgcg gacagcagga
      901 ggccgtcatc cgccacgtca cggaaggcgg cgatgcggtc gtgctgtttc cgaccggggc
      961 gggcaagtcg gcctgctacc agattccggc gatctgccgg ccgggcgtgg ggatcgtcat
     1021 ctcgccgctg atcgccctga tgcgcgatca ggtcgaggcg ctgcgccagg tcggggtgcg
     1081 cgccgccgcg ctcaattcgt cgctggcgcc gcaggaagca gagctggtgc ggcggcagtt
     1141 gctgcgcggc gagctggact tgctctacgt cgcgcccgag cggctggtga cggctggttt
     1201 ccagcatttg ctggcgggcg tggacatctc gctctttgcc atcgacgagg cgcattgcgt
     1261 cagccagtgg ggccacgact tccggccgga gtaccgggaa ctgagccgca tcaccgagct
     1321 gttccccggc gtgccgcgcc tcgcgctgac tgccaccgcc gacgcggtga cgcgcgacga
     1381 catcgtcgag cggctcgggc tgggcgaggc gcggctgttc tcggccagct tcgacaggcc
     1441 caacatcagc tacaccatcg tcgagcgggc caaccagaaa aagcagctgc tggacttcct
     1501 gtcgcggcat cgcggcgaca gcggcatcgt ctactgcctg tcgcgcaaca aggtcgacga
     1561 gatcgccgca tggctcaccg gcgagggcat ccgggccctg ccctaccatg ccggcatgga
     1621 cgcgcgccgg cgcagcgcca accaggatgc gttcctcaag gaagagacgc tctgcctcgt
     1681 cgccacggtg gcgttcggca tgggcatcga caagcccgac gtgcgctacg tggcgcatct
     1741 cgatttgccg gcgtcgatcg aggcctacta ccaggagacc gggcgcgccg gccgcgacgg
     1801 gctgccggcg gaggcgtgga tgagctacgg catggcggat gccgcgcagc gccgccggat
     1861 gatcgatgag ggcaatgccc ccgatgccgt caagcgcgtc gagcacgcca agctcaacgc
     1921 gctgctcggg gtctgcgaga ccgccggctg ccggcggcag gcgatcctca atcatttcgg
     1981 cgaagctcat gcgggccatt gcggcaattg cgacacctgc cagtcgccgg tcgacagctg
     2041 ggacgcgacg gacgcggtgg tgaaggcgat ggcggcgatc tatcgcacgg gccagcgttt
     2101 cggggcggcc cacatcgtcg acgtgctgct gggcaagcag accgaaaagg tgctccgctt
     2161 cgggcacgag gcgcagccgg tattcggcgc cggccgcgac ctcgcggcga agacgtggca
     2221 gtcggtgctg cggcagatcg cggcggcggg gctggtcgca gtggaccacg aacggcatgg
     2281 cgcgctggtg ctgggcgaga gcgcccggcc ggtgttccgc ggcgagcaac ggatcaccct
     2341 gaggcgcgac cagccgcagc gcgccgcggc agtgcggcgc tcgctcgagc gcagcaccgg
     2401 attgccggag gccgcggtcg gcctgttcga ggcgctgcgc gccgagcgca cgcggctggc
     2461 gaagctgcag ggcgtgccgc cctacgtgat cttccacgat accacgctgc gggcgatcgc
     2521 gacggcccgg cccagcggcc tcgaggcgct gggcgagctg cccggcgtcg gccaggccaa
     2581 gctcgatcgc tatggcgatg ccttcctgca gatcgtcgcg gcgcatccct agagcatcat
     2641 tatatagcgg acggtgccat gcccagatcg ctgctgtttg tcggaagctg caatcgcgga
     2701 ctgccctacg tgccgctgac gcacgggcgg ggcatcagcg cctacgacgt cgatgtggag
     2761 accggcgcgg cgcggctgct cgaggtcttc gaggacatcg acaacccgac cttcctcacc
     2821 gtctcccccg acggccggtc gctttacgcg gcaagcgaga tggccggtgc cgttgatggc
     2881 acgatcaccg ccttcgccat cgaacgggcg accggcgggc ttacccggct cggcgcccgg
     2941 ccgagcgagg gctacacgcc ggcgcacatc tcgctggatc cggcgggagc gctggtggcg
     3001 gccgccaact atggcgacgt cgccgccgac aagcggccgg ccggcgaggc gatcgtggtg
     3061 tatcggcgcg accccagcgg ggcgttgagc ccggtgatcg cgcgtgccgc gcatggcggc
     3121 agcggccccg accggagccg gcaggagcgc ccgcaccccc actgcgtcgg ctggacgccg
     3181 gacggacgct ttctcgtggt gagcgatttg ggggtcgacc ggctgctgat ctaccggctc
     3241 accatcggcg gcctcatcgc ccacggcgaa gtggcgctgc cgccgggctc gggaccgcgg
     3301 cacttcacgt tccacccgaa cggccgcttc gcctatgtgg tgaccgaaat gggctcgacc
     3361 gtcgtcagct ttgcgttcga cgccgggcat gccggcttcc gcctgctcga cgtggcttcg
     3421 acgatcccgg cgggggcgcg ggccaatacc ggcgcggcga tcgccctgac gccggacggg
     3481 cgccatgtgc ttgccagcaa tcgcggcgac gatagcgtgg cgcggctggc gatcgacgcc
     3541 ggaggtgttg cccgcttcac cgagacgacg ccgagcggcg gccgcacgcc gcgcgacttc
     3601 accttcgatc cgggcggacg gttgctcgcc gtggccaacc agaacagcga caatgttgcg
     3661 cttttccgct acgagagaag cagcgggagc ctgacgccgc tggccagcat cggggtcggc
     3721 tcgccgactg tcgttgcctt ttatccggac cctgcctgac atgcccgacc acgatctcgt
     3781 catccgtaat gccaccctcg tggatggaac cggcggcccg ccgcgtcgcg gcgacctggc
     3841 gatatcgggc gaacgcatcg cggccgtggg cgacgtcgcc gggcgggcga ccgaagagat
     3901 cgacggcagc ggcctgacgc tgtcaccggg cttcatcgac gtccacaccc atgacgacgg
     3961 cgcgctgctc gccgatccgc ggatgaccgc gaaggtcagc cagggggtga ccaccgtcat
     4021 catcggcaat tgcgggattt cgctggcgcc catcgcgccg ctcgatccgc caccgccgct
     4081 caacctcctc ggcgaccgca gcgcgtttcg gttcgagacg atggccgcct atctcgac
//
LOCUS       DATAZA010000400         5260 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1676356, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000400 DATAZA010000000
VERSION     DATAZA010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5260
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1676356"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..699)
                     /locus_tag="VHZ56_10120"
     CDS             complement(67..699)
                     /locus_tag="VHZ56_10120"
                     /inference="COORDINATES: protein motif:HMM:NF021214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HEX4298367.1"
                     /translation="MTAIALQRGGSRAGWISLVAALAVLAGLWCGPLLPLSRTAFSAH
                     MLLHLGLVVVAAPLLGLALAAHLPSPRGFANALGWYLLAGAFEMVAVWGWHIPLLHDA
                     AGHNLPLFAVEQASFLAGGTALWAALWTARTPAAALAAAITAFFAFAHTSMFGLLLSL
                     VPRLIYDPNLCQGAFGLDRLDDQHLGGALMAVSGLVYLAAAAVLCVRVLR"
     gene            complement(696..1061)
                     /locus_tag="VHZ56_10125"
     CDS             complement(696..1061)
                     /locus_tag="VHZ56_10125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007592935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX4298368.1"
                     /translation="MNRLAVFTLALPALLALAACSSASSAPPGGDAAAGAALITRYGC
                     GSCHSIPGIVDANGLVGPPLARIASRQFIAGVLRNTPDNMVQWLRFPQRIVPGNAMPD
                     LAISETDARQLTAYLETLR"
     gene            complement(1058..1660)
                     /locus_tag="VHZ56_10130"
     CDS             complement(1058..1660)
                     /locus_tag="VHZ56_10130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HEX4298369.1"
                     /translation="MSDATVSVPLPVGSPGRKSGGWFGMIALIVTEASLFLYLLFSYY
                     YFALWGSGEFVPAPLPKFDLSAPDTAVLLLSSVSVWWGERGMRRGSRRQTAIGLVVTL
                     LLGLVFVSVQLVEWSKKPFHFNQSTYSALYFTITGFHLAHVVAGMIILAVLLIWSQLG
                     YFDARRNVPVAIGAIYWHFVDAVWIAVFFTIYVTPYLGVR"
     gene            complement(1653..3605)
                     /gene="ctaD"
                     /locus_tag="VHZ56_10135"
     CDS             complement(1653..3605)
                     /gene="ctaD"
                     /locus_tag="VHZ56_10135"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HEX4298370.1"
                     /translation="MSVPEHDVLPRVTSLAEDPGLPERLRRMWETSPGLYGWIATVDH
                     KQIGLRYIVTAFVFLLLGGVEALIMRLQLAQGGERLLTPEQYDQLFSMHGITMIFLYA
                     LPVLSGFSNFLFPLVLGGRDMAFPRLNAFSYWVYIAAGLFMYASFLMGVAPDDGWFNY
                     APNALKPFSPGPNMDFYALGMILLGVSTTVGAVNFVITVLRMRAPGMIITRLPVLVWG
                     TSTASAAILLAVPAVSLAFILLWLDRNFGTHFFSGSAGGQPLLWQHLFWIFAHPWVYI
                     IVLPAMGLVSDALPILCRRPLVGYGPVVLATVVTMIVGFGVWAHHMFATGLPEIASSF
                     FSSTSFIIALPSAVATFAWIATIWAGRPVFTTALLYFVGFIVMFVIGGVSGVVTASVP
                     ADLQLTDTYFVVAHLHYVLIGINLFGVLGALYFWFPKMTGRFLGERLGRWNFWVTFIG
                     FNVAFLPMHLTGLMGMPRRVYTYPVDPGLDAVNLTSTLGSLLLGVGILLLVINVVLSL
                     RQPRTAPANPWDAPTLEWAMSSPPPPYNFAVIPTIESRHPLWEDRLQPGGDRSVLDRG
                     LALDRGKEALATTVLEARPDVVLKMPDDSPWPFALTVAMSVLFTALLLHGWWVGMASA
                     LVLFACVLGWLWPSRRLAQTAEPPNV"
     gene            complement(3615..4559)
                     /gene="coxB"
                     /locus_tag="VHZ56_10140"
     CDS             complement(3615..4559)
                     /gene="coxB"
                     /locus_tag="VHZ56_10140"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HEX4298371.1"
                     /translation="MIAPLDLFHPAGAVAQQVSPLLWGLLALSVVVVLLIIGAVGAAL
                     IVRTQGTHNPADVAPERSPGGLRWIYALTGLSAAVLAVFVVWTLTTMAGIATPSQPAA
                     FTIDVVGHQWWWQFTYEPTPAAPGFVTANELHVPVGVPVRFHITSSDVIHSFWVPALG
                     GKTDAIPGQLNDAWLEADKPGIYRGQCAEYCGQQHAQMALFVVAEPQAAFDGWRAQQA
                     ASAGATADAGDEAQFVQSCGKCHTVRGSPASGTRGPDLTHLMSRGTIAAGALPNSVGN
                     LGGWIANPQAIKPGAKMPIVPLSGPQLQAVLRYLETLT"
     gene            complement(4556..>5260)
                     /locus_tag="VHZ56_10145"
     CDS             complement(4556..>5260)
                     /locus_tag="VHZ56_10145"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX4298372.1"
                     /translation="FFDVSASSGHSPPVEWLLHFAMERSVAFYAPERAVPDLDDPDVV
                     LRGALHYASGCAPCHAAPGELASPIARRMTPVPPGLYSAARDFDPSQLFWIVQNGVKM
                     TAMPAWPAPGRDDEIWAMVAFLEQLPRLKTPDYLTLVGEPGASWLPAPPAAVDGLFDV
                     AACSRCHGADGRGRAGAFASIAGLGEAAIEAALRGYRDGSKPSGFMQPIAAQLSDAQI
                     VAAAQHYAALPPAGAP"
BASE COUNT          980 a         1780 c         1846 g          654 t
ORIGIN      
        1 aacgccctga tctcagggct ccagccggtc aggagcatcc gccgatagcc gcccgccggt
       61 tccggttcag cgcagcacgc gcacgcacag cacagcggca gcggcgagat agaccagccc
      121 gctgaccgcc atcagcgcgc cccccagatg ctggtcgtcc agccggtcga gcccgaacgc
      181 cccctggcag agattggggt cgtagatcag gcgcggcacg aggctcagca gcagcccgaa
      241 catgctggtg tgcgcgaagg cgaagaaagc agtgatcgca gccgcaaggg ccgccgccgg
      301 cgtgcgcgcc gtccacagcg ccgcccagag cgctgttcca cccgcgagga agctcgcctg
      361 ctcgacggcg aacaacggca ggttgtgccc ggccgcatca tgcagcagcg ggatatgcca
      421 gccccacacc gcaaccatct cgaatgcccc ggcgaggaga taccagccga gggcgttggc
      481 gaagccgcgc ggcgacggca gatgcgccgc cagcgccagc ccaagcagcg gcgcggcgac
      541 gacgaccagc cccaggtgca gcagcatgtg cgccgaaaac gccgtccggc tcagcggcaa
      601 cagcggtccg caccacaatc ccgcaagcac cgcgagggcg gcgacaagac tgatccagcc
      661 ggcgcggctg ccgccccgct gcagcgcgat cgccgtcacc tgagggtctc gaggtaggcc
      721 gtcagctgcc gtgcatcggt ctcggaaatc gccaggtccg gcatggcgtt gccgggaacg
      781 atccgctgcg ggaagcgcag ccattgcacc atgttgtcgg gcgtgttgcg cagcacgccg
      841 gcgatgaact gccggctggc gatgcgggcc agcggcggcc cgacgaggcc gttggcgtcg
      901 acgatgccgg gaatgctgtg gcaggagccg cagccgtagc gggtgatgag cgccgcgcca
      961 gccgcggcgt cgccgcccgg cggcgcggaa ctggcgctcg agcaggcggc cagcgccagg
     1021 agcgccggca aggcgagcgt gaagactgca agacggttca tctcaccccc agatatggcg
     1081 tgacgtaaat ggtgaagaac acggcgatcc agacggcatc gacgaagtgc cagtagatgg
     1141 cgccgatggc caccggtacg ttgcggcgcg cgtcgaaata gccgagctgc gaccagatca
     1201 gcagcaccgc caggatgatc atcccggcca ccacgtgcgc gaggtggaag ccggtgatgg
     1261 tgaaatacag cgcgctgtag gtcgactggt tgaagtggaa cggctttttt gaccactcga
     1321 ccagttgcac ggaaacgaag accagcccga gcagcagcgt gacgacgaga ccgatcgccg
     1381 tctgccggcg cgagccgcgg cgcatgcccc gttctcccca ccacacgctg acgctgctga
     1441 gcagcagcac cgccgtgtcc ggcgccgaaa gatcgaactt cggcagcggc gccggcacga
     1501 actcgccgct gccccacagc gcgaagtagt agtagctgaa cagcaggtag aggaagagcg
     1561 acgcctcggt gacgatcagc gcgatcatgc cgaaccagcc gcccgatttg cggcccgggc
     1621 tgccgaccgg cagcggcacg ctcaccgttg cgtcagacat tgggcggctc cgcggtctgc
     1681 gccagccgcc gcgacggcca gagccagccg aggacgcagg cgaacagcac cagcgccgac
     1741 gccatgccga cccaccagcc gtgcagcagc agcgccgtga acagcacgct catcgccacc
     1801 gtcagggcga agggccaggg cgaatcgtcg ggcatcttca gcaccacgtc gggccgcgcc
     1861 tcgagcacgg tggtcgccag cgcctccttg ccgcggtcga gcgccagccc cctgtcgagg
     1921 acgctgcggt ccccgcccgg ctgcaggcgg tcctcccaca agggatggcg gctctcgatc
     1981 gtcgggatga ccgcgaaatt gtagggcggc ggcggcgagg acatcgccca ttcgagcgtc
     2041 ggcgcgtccc acgggttggc cggcgccgtg cgcggctggc gcaggctcag cacgacattg
     2101 atcaccagca gcaggatgcc gacgccgagc agcagcgagc ccaatgtact ggtcaggttc
     2161 accgcgtcga ggccgggatc gacggggtag gtgtagacgc gccgcggcat gcccatcagg
     2221 cccgtcaggt gcatcggcag gaaggcgacg ttgaagccga tgaaggtgac ccagaagttc
     2281 cagcggccga ggcgttcgcc gaggaaccgg ccggtcatct tcggaaacca gaaatagagg
     2341 gccccgagca cgccgaacaa attgatgccg atcagcacgt agtggagatg ggcgacgacg
     2401 aaataggtgt cggtcagctg caggtcggcc ggcaccgacg ccgtcaccac gcccgagacg
     2461 ccgccgatca cgaacatgac gatgaagccg acgaagtaga gcagcgccgt ggtgaagacc
     2521 ggccggccgg cccagatggt ggcgatccag gcaaaggtcg cgacggcgct cggcagggcg
     2581 atgatgaacg aggtgctgga gaagaaggac gaggcgatct cgggcaggcc ggtggcgaac
     2641 atgtggtgcg cccacacgcc gaagccgacg atcatcgtca ccacggtcgc cagcaccacc
     2701 ggcccgtagc cgaccagtgg ccggcggcag aggatgggga gcgcgtccga gaccagcccc
     2761 atggccggca gcacgatgat gtagacccag ggatgcgcga agatccagaa caggtgctgc
     2821 cacagcaggg gctggccgcc ggcgctgccg gaaaagaagt gcgtcccgaa attgcggtcg
     2881 agccacagca ggatgaaggc gaggctgacc gccggcaccg cgagcaggat cgccgccgaa
     2941 gcggtggagg tgccccatac gaggaccggc aggcgcgtga tgatcatccc cggcgcccgc
     3001 atcctgagca cggtgatgac gaagttgacg gcgccgacgg tcgtcgacac cccgagcagg
     3061 atcattccga gcgcgtagaa gtccatgttg gggcccgggc tgaacggctt cagcgcattc
     3121 ggggcgtagt tgaaccagcc atcgtccggc gcgaccccca tcaggaagct cgcatacatg
     3181 aacagcccgg ccgcgatgta gacccagtac gagaacgcat tgaggcgcgg aaacgccatg
     3241 tcccgcccgc cgagcaccag cgggaagagg aagttcgaga accccgacag caccggcagc
     3301 gcatagagaa agatcatggt gatgccgtgc atcgagaaca gctggtcgta ttgctcgggc
     3361 gtcagcaggc gctcgccgcc ctgcgccagc tgcagccgca tgatcagcgc ctcgacgccg
     3421 cccagcagca ggaacacgaa cgccgttaca atgtagcgca gcccgatctg cttgtggtcg
     3481 acggtcgcga tccagccgta gaggcccggc gaggtctccc acatccggcg caggcgctcc
     3541 ggcaggccgg ggtcctcggc gaggcttgtc acccgcggca gcacgtcatg ttcgggaacg
     3601 ctcatggcat ggcctcaggt cagggtttcg agatagcgca ggaccgcctg cagctgcggc
     3661 ccggagagcg gaacgatcgg catcttcgcc cccggcttga tggcctgcgg attggcgatc
     3721 cagccaccga ggttgccgac ggaattgggc aatgccccgg ccgcgatcgt gccgcggctc
     3781 atcaggtgcg tgaggtctgg gccgcgcgtg ccgctggcgg gactgccgcg aaccgtgtgg
     3841 cacttgccgc agctctggac gaactgcgct tcgtcgccgg catcggccgt ggcgccggcg
     3901 ctcgccgcct gctgcgcccg ccagccgtcg aaggcggcct gcggctcggc caccacgaac
     3961 agcgccatct gcgcgtgctg ctggccgcaa tattcggcgc actggccgcg atagattccc
     4021 ggcttgtccg cctcgagcca ggcatcgttg agctggccgg ggatggcgtc ggtcttgccg
     4081 ccgagcgccg gtacccagaa gctgtggatc acgtcgctcg aggtgatgtg gaagcgcacc
     4141 ggcaccccga ccggcacatg cagctcgttg gccgtcacga accccggggc ggcgggcgtc
     4201 ggctcgtagg tgaactgcca ccaccactgg tgtccgacga cgtcgatggt gaacgccgcc
     4261 ggctgcgacg gggtggcgat ccccgccatg gtggtgagcg tccagaccac gaagacggcg
     4321 agcacggcgg ccgacagccc ggtcaaggcg tagatccagc gcaggccccc cggcgagcgt
     4381 tccggcgcaa cgtcggcagg attgtgggtg ccttgggtgc gcacgatgag ggccgccccg
     4441 accgcaccga tgatcagcag cacgacgacg accgacagcg ccagcaaccc ccacagcagg
     4501 ggcgagacct gctgcgccac ggctccggcc ggatggaaga ggtcgagcgg cgcgatcatg
     4561 gcgcccccgc cggcggcaat gccgcgtagt gctgcgcggc ggcgacgatc tgggcgtcgg
     4621 acagctgcgc ggcgatcggc tgcatgaagc cgctcggctt gctgccgtcg cggtagccgc
     4681 gcagggcagc ctcgatggct gcctcgccga ggccggcgat cgaagcgaag gcgccagccc
     4741 ggccacggcc atcggcaccg tggcagcggg aacaggccgc gacgtcgaac aagccgtcga
     4801 ctgcggccgg cggcgccggc agccagctcg cgcccggctc gccaacgagc gtcaaatagt
     4861 ctggggtttt cagcctcggc aactgctcga gaaaagccac catcgcccag atctcgtcgt
     4921 cgcggccggg cgccggccaa gccggcatcg ccgtcatctt gacgccgttc tggacgatcc
     4981 agaacagctg gctgggatcg aaatcgcgcg ctgccgagta gagccccggc ggcaccggcg
     5041 tcatccgccg ggcgatcggc gacgccagtt cacccggggc ggcgtggcag ggcgcgcagc
     5101 cgctcgcata gtgaagggcg ccgcgcagaa ccacgtccgg atcgtcgagg tcggggacgg
     5161 cccgttccgg cgcataaaag gccaccgagc gctccatcgc aaagtggagc agccactcga
     5221 ccgggggcga atgtccgctg cttgccgaaa catcgaagaa
//
LOCUS       DATAZA010000401         6350 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_168543, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000401 DATAZA010000000
VERSION     DATAZA010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6350
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168543"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..659)
                     /locus_tag="VHZ56_10150"
     CDS             complement(<1..659)
                     /locus_tag="VHZ56_10150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006935443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298373.1"
                     /translation="MSLAVAGFGFAGPVWAPADVAAPPVARRETGPGTSVTVVAVKSR
                     LSPINRRRLRNFFANRRGIWSLWIFVLLFAVSLGSEFIANDRPILASYKGELLFPFAV
                     DYPESKFGGFLATTNFRDPVNRDEIDAHGWMLWPPVHFSYGTVDNDLPVPAPAPPTWT
                     MSAADRCAGYPQGADDPDCIAGNVHWLGTDDTGRDVLARLLYGFRISVLFGLALTIVS
                     SV"
     gene            complement(656..1795)
                     /locus_tag="VHZ56_10155"
     CDS             complement(656..1795)
                     /locus_tag="VHZ56_10155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006465729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter permease YejB"
                     /protein_id="HEX4298374.1"
                     /translation="MGAYILRRLLLMIPTLFGIMAVSFLVVQFAPGGPVEELISRMSG
                     SHVGPLAAVTDSANEVVTSGNGPKAAIAAAGTSGSQSQQAPSAYRGARGLSPKFLAQL
                     NAQFGFDKPPLERFGTMLWNYLRFDFGRSFFRDISVLDLIKEKLPVSITLGLWMTLLS
                     YGISIPLGIAKAVRDGSRFDVWSSSVIVVGYALPGFLVAILLIVLFAGGSFWSIFPIK
                     GLVSNDFAQLSWWQKILDYLWHITLPVIAMGLGAFATTTFLTKNSFLEEIRKQYVVTA
                     RAKGLTERKILYGHVFRNAMLILIATFPGAFIGAFFGGSLLIETIFSLDGLGLLGFNA
                     VISRDYPVVFATLYIFSLLGLVIGLISDLTYAWVDPRIDFESREV"
     gene            2066..2392
                     /locus_tag="VHZ56_10160"
     CDS             2066..2392
                     /locus_tag="VHZ56_10160"
                     /inference="COORDINATES: protein motif:HMM:NF018744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1344 domain-containing protein"
                     /protein_id="HEX4298375.1"
                     /translation="MRKLLLPILIIASLGATQVMAATTTTTPAPATTTAMTPAKPAPA
                     PTTTDGAISKIDAKTCIVTLDKKKNYHFDAKCDFSKLKVGDKVAITWAMKGKYRWASA
                     IVEATA"
     gene            complement(2475..3521)
                     /locus_tag="VHZ56_10165"
     CDS             complement(2475..3521)
                     /locus_tag="VHZ56_10165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018328065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX4298376.1"
                     /translation="MIGIKRLASHLNVSIGTVSRALNNRPDVNDATRQRVLAAAEELG
                     YVPNQSGRSLRRGRTGVIGFMMQTGHEIADQGDSFFMSVFDGVQTVLGRHHLDLVALL
                     CASGEDTDGYLRRMVSRGLADGFIISSTQRVDPRISFLAERQVPFATLGRSTTDAGQP
                     WLDIDFETIARDAVLRLVDRGHRRIAVTVPHDETNLGYIFRDAAAAALASRGLALDPA
                     LVFRSTPSEAGGYGIARGLLALAERPTAILLVNETITTGFYRGLFEADYLPGRDIAVI
                     GRYSPQTRYLSPTLTSYRLSLQDLGVSLGEALLASMPAYAEAYPVGRVRKVWPLEFIA
                     GESDNYMLAAPGGR"
     gene            3665..4696
                     /locus_tag="VHZ56_10170"
     CDS             3665..4696
                     /locus_tag="VHZ56_10170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007765706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4298377.1"
                     /translation="MIFRAVLAGCGGMSRGWLKAIQGPELRDRVAIVGLVDLDRAAAE
                     RLRDEFGLDGVPVGNDLAPMLASVKPDVLFDVVVPGARKDVVLAGLVHGCHVLSEKPM
                     AGSLPEARELVAHAAAAGRVHAVVQNRRFIAGVRSIRQTIASGALGELTALHADFFIG
                     AHFGGFREAMEHPLLLDMSIHTLDAARFMSGKEPLAVYCLESNPRGSWYAAGAAADAI
                     FEFSDDVVFTYRGSWVAEGGPTSWESAWRIVGTGGTLLWDGADRFEARAPAEQSGFLR
                     PLKDVAVSPPPHPAQTHGHASVIAEFLDAIAAGRPPETAGNDNIKSLAMVFGAIESAR
                     TKARVAITT"
     gene            4709..5611
                     /locus_tag="VHZ56_10175"
     CDS             4709..5611
                     /locus_tag="VHZ56_10175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010975878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEX4298378.1"
                     /translation="MTDPAKAIRIGTMIKATEGHAVETIGGLADMGFESFEPFFWQST
                     RGQDLAEMGKRSLDAIGNRDITISTLGMFGNPLETQPLDIETLDGWKACIDNAHHFGA
                     TTVAGFTGRIRNKPLTDSLPQYKKVWSELARRAADKGVRLAFENCAMDGNWATGDWNI
                     AHNPDAWELIFNETPDDNIGLEWEPCHQLVYLIDPLPQIRKWAHKFFHVHGKDATVRW
                     EVIREHGIFGKEKFVFMRTPGFGDSNWTDIISELRLAGWSGSIDIEGWHDPVYRNALE
                     MTGQIRGLAYLKECRGGEFIDKAA"
     gene            5697..>6350
                     /locus_tag="VHZ56_10180"
     CDS             5697..>6350
                     /locus_tag="VHZ56_10180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004680247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX4298379.1"
                     /translation="MRRLSKLALAAAASATLLSSPVFAQQKTFNIWWFEDPTSSEGIA
                     WTKALDEFKTMHPDVTVNFQQKTFQQLQAAGSMILNSDQAPDVLEYNKGNATAGLVAS
                     QGLLTNLDDYVTKEGWDKILNAGDLVLSKYDDKGIYGSGHVWGISVYGEYVSCFYNID
                     MFNKAGLKVPTTIDEWVADMAAFQKQGVTPLALGAIDTSGQHLLASLAYTKADDTWVQ
                     "
BASE COUNT         1199 a         2039 c         2162 g          950 t
ORIGIN      
        1 accgaggaaa cgatggtcag cgccagcccg aacagcaccg agatgcggaa gccgtagagc
       61 agccgcgcca gcacgtcgcg gccggtatcg tcggtgccga gccagtggac attgccggcg
      121 atgcagtcgg gatcgtcggc gccctgcgga tagccggcgc agcggtcggc ggcgctcatg
      181 gtccaggtgg gcggcgcggg tgccggcacc ggcagatcgt tgtcgaccgt gccgtaggag
      241 aaatgcaccg gcggccagag catccagcca tgcgcgtcga tctcgtcgcg attgacgggg
      301 tcgcggaaat tggtggtggc gaggaaaccg ccgaacttgc tttcgggata gtccacggcg
      361 aagggaaaca gcagttcgcc tttgtaggag gcgaggatgg gccggtcgtt ggcgatgaac
      421 tcggagccga gcgagacggc aaacaataga acgaaaatcc acaacgacca gatgccgcgg
      481 cgattggcga agaaattgcg cagccggcgg cggttgatcg gcgacagccg ggacttgacc
      541 gcaaccacgg tcacggaggt accaggcccg gtctcccggc gcgccaccgg tggcgcagcg
      601 acgtcggccg gggcccacac cgggccggcg aagccgaacc ctgcaaccgc caggctcata
      661 cctcgcggct ttcgaaatcg atgcgcggat cgacccacgc ataggtgagg tcggagatga
      721 gcccgatcac cagtccgagc agcgagaaaa tgtagagcgt cgcgaagacc acggggtagt
      781 cgcggctgat caccgcgttg aagccgagca ggccgaggcc gtcgagcgag aagatggtct
      841 cgatcagcag cgagccgccg aagaaggcgc cgatgaaggc gcccgggaag gtcgcgatca
      901 ggatcagcat ggcgttgcgg aagacgtggc catagaggat cttccgctcc gtcaggccct
      961 tggcgcgggc ggtcaccacg tactgcttgc ggatttcctc gaggaacgag ttcttggtga
     1021 gaaaggtcgt ggtggcgaag gcgccgagcc ccatggcgat caccggcagg gtgatgtgcc
     1081 agaggtagtc gagaatcttc tgccaccagc tcaattgcgc gaagtcgttg gagacgaggc
     1141 ccttgatcgg gaaaatgctc cagaagctgc cgccggcgaa cagcacgatc aggaggatgg
     1201 cgacgagaaa gcccggcagc gcgtagccga cgacgatcac cgacgagctc cacacatcga
     1261 agcgcgagcc gtcgcgcacc gccttggcga tgccaagcgg gatggagatg ccgtagctga
     1321 ggagcgtcat ccacagcccc agggtaatcg agaccggcag cttctccttg atcaggtcga
     1381 gcaccgagat gtcacgaaag aagctgcggc cgaaatcgaa gcgcagatag ttccagagca
     1441 tggtgccgaa gcgctcgagc ggcggcttgt cgaagccgaa ctgggcattg agctgggcga
     1501 ggaatttcgg gctgagcccg cgcgcgccgc gataggcgga aggggcctgc tgggactggc
     1561 tgccgctggt gccggcggcg gcgatggccg ccttggggcc gttgccggag gtcaccactt
     1621 cgttcgccga atcggtgacg gcagcaagcg gcccgacatg gctgccgctc atgcgcgaga
     1681 tcagctcctc gaccggcccg ccgggggcga actgcaccac gaggaacgac accgccatga
     1741 tcccgaacag cgtcgggatc atcagcagca ggcgtcgcag gatgtaagcg cccattcagg
     1801 ctccggccag gggacgcggc agaggctggg ccgcggcgat ggtcaatttg tgacagaaca
     1861 acggggacgg gtcacgcacg gtttcgtggc gcgggcgctc acctgaatgt gtcgcggcag
     1921 cggcaacctt accgcgatgt aagtttcgcg aaggcaagac gcaaatctcc gactctaccc
     1981 aagtccccgc cggtgccgat gtgccggccg cggtccaggc aaatcggtct tcggccgccg
     2041 acattttccc attcggagat cgataatgcg caagttgctg ctccccattc tgatcattgc
     2101 ctcgctgggc gcgacgcagg tcatggccgc cacgacgacc accaccccgg caccggccac
     2161 caccaccgca atgaccccgg caaagccggc gccggcgccg accaccactg acggcgcgat
     2221 ctccaagatc gacgccaaga cctgcatcgt caccctcgac aagaagaaga actaccactt
     2281 cgacgcgaag tgcgacttct ccaagctcaa ggtcggcgac aaggtcgcga tcacctgggc
     2341 gatgaagggc aagtatcgct gggccagcgc catcgtcgaa gccaccgcct aactccgggt
     2401 ttccggaacg atcgaggggc ggagagcctg ccgcccctcc ctcgccggcc cggtggtcgt
     2461 agacaccggt agcgtcaacg accaccgggt gcggcgagca tataattgtc gctctccccg
     2521 gcgatgaatt cgagcggcca caccttgcgg acgcggccga cgggataagc ctcggcgtag
     2581 gcgggcatgc tggcgagcag cgcctcgccc agcgacaccc ccagatcctg cagcgacaag
     2641 cggtagctgg tcagcgtcgg cgacaggtag cgggtctgcg ggctgtagcg gccgatgacc
     2701 gcgatgtcgc gtccgggcag gtagtccgcc tcgaacagtc cacgataaaa gccggtcgtg
     2761 atggtctcgt tgacgagcag gatcgccgtc ggccgctctg cgagcgcgag caggccgcgg
     2821 gcgatgccgt agccgcccgc ctcgctcggg gtcgagcgga acaccagcgc cgggtcgagc
     2881 gcgaggccgc gcgaggcgag cgcggcggcg gcggcatcgc ggaagatgta gccgaggttg
     2941 gtttcgtcgt gcggcacggt gacggcgatg cggcggtggc cacgatcgac gagccgcagg
     3001 acggcgtcgc gggcgatggt ctcgaagtcg atgtcgagcc agggctggcc ggcatcggtg
     3061 gtgctgcgac cgagggttgc gaacggcacc tggcgctcgg ccagaaaact gatgcgcggg
     3121 tcgacccgct gcgtcgagga gatgatgaag ccgtcggcga ggccgcgcga caccatgcgc
     3181 cggaggtagc cgtcggtgtc ctcgccggag gcgcagagca gcgccacgag gtcgaggtgg
     3241 tggcggccga gcacggtctg cacgccgtcg aagacgctca tgaagaagct gtcgccctgg
     3301 tcggcgattt catggccggt ctgcatcatg aagccgatca cgccggtccg cccgcgcctg
     3361 aggctgcggc ccgactggtt ggggacgtaa cccagttcct cggcggcggc gagaacgcgc
     3421 tggcgggtcg cgtcgttgac gtcgggacga ttgttgagcg cgcgcgacac cgtgccgatc
     3481 gacacattga ggtggctcgc gaggcgcttg atcccaatca tcccggcgcc ctcctctgct
     3541 caacgctctc tattacacgc agcgcgccgc cgccagttga ctcgtaaacg tttccggggc
     3601 acggtcgtaa acgtttacgg accaatagac tgctgttcag gcggcgcgtc cgagggagag
     3661 cactttgatc tttcgtgcgg tgctggccgg ctgcggcggc atgtcgagag gctggctgaa
     3721 ggccatccag ggacccgagc tgcgggaccg ggtggcgatc gtcggcctcg tcgatctcga
     3781 ccgggcagca gccgaacgcc tgcgcgacga attcggactc gacggcgtgc cggtcggcaa
     3841 cgacctcgcc ccgatgctgg cgtcggtcaa gccggacgtg ctgttcgacg tggtggttcc
     3901 gggcgcgcgg aaggacgtcg tgctcgcggg gcttgtccat ggctgccacg tcctctcgga
     3961 aaagccgatg gcggggtcgc tgccggaggc gcgcgagctg gtggcccacg cggcggccgc
     4021 cggacgggtg catgcggtcg tgcagaaccg ccgcttcatt gccggcgtgc gcagcatccg
     4081 gcagacgatc gcgagcggcg ccctgggcga actgacggcg ctgcatgcgg acttcttcat
     4141 cggcgcgcat ttcggcggct tccgcgaggc gatggagcat ccgctgctgc tcgacatgtc
     4201 gatccacacg ctcgacgccg cccgcttcat gtcggggaag gaaccgctgg ccgtctattg
     4261 cctcgagagc aacccgcgcg gctcgtggta cgcggcgggc gcggcggccg atgcgatctt
     4321 cgaattctcc gacgacgtcg tcttcaccta tcgcggctca tgggtcgccg agggcggccc
     4381 caccagctgg gaaagcgcct ggcggatcgt cggcaccggc ggcaccctgc tgtgggacgg
     4441 cgccgaccgc ttcgaggcgc gcgcgccggc ggaacaaagc gggtttcttc gcccgcttaa
     4501 ggatgtggcg gtgtctcccc cgccacatcc tgcccaaacc cacggccatg ccagcgtcat
     4561 cgccgagttc ctcgacgcga tcgcggcggg ccggccgccc gaaaccgcgg gcaacgacaa
     4621 catcaagagc ctggccatgg tgttcggcgc catcgagagc gcccgcacca aggcccgcgt
     4681 cgccatcacc acctgaagga aacgtcccgt gactgacccg gccaaagcca tccgtatcgg
     4741 caccatgatc aaggccaccg agggccacgc cgtcgagacc atcggcggac tggccgacat
     4801 ggggttcgaa agcttcgagc cgttcttctg gcagtcgacc cgtggccagg atcttgccga
     4861 gatgggcaag cggtcgctcg acgccatcgg caatcgcgac atcaccatct cgacgctggg
     4921 gatgttcggc aatccgctcg agacgcaacc gctcgacatc gagacgctcg atggctggaa
     4981 ggcgtgcatc gacaacgccc atcatttcgg cgccaccacc gtcgccggct tcaccggccg
     5041 catccgcaac aagccgctga ccgacagcct gccgcaatac aagaaggtct ggtcggaact
     5101 ggcgaggcgc gccgccgaca agggcgtccg gctggcgttc gagaattgcg cgatggacgg
     5161 caactgggcc accggcgact ggaacatcgc gcacaacccc gacgcctggg agctgatctt
     5221 caacgagacg ccggacgaca atatcgggct cgaatgggag ccctgccacc agctggtcta
     5281 tctcatcgat ccgctgccgc agatccgcaa atgggcacac aaattcttcc acgtgcacgg
     5341 caaggacgcg acggtgcgct gggaggtcat ccgcgagcac ggcatcttcg gcaaggagaa
     5401 gttcgtgttc atgcgcaccc ccggattcgg ggacagcaac tggaccgaca tcatctccga
     5461 gctgaggctc gcgggctggt cgggctcgat cgacatcgag ggctggcacg acccggtcta
     5521 tcgcaacgcg ctcgagatga ccgggcagat ccggggcctc gcctacctca aggaatgccg
     5581 cggcggagag ttcatcgaca aggccgcctg aggcgaacct tcaagtcgga ccagccgcgg
     5641 gtcgtggcgc cgactttcgt tccaagagca gcgatccgca caaggaggag acgactatga
     5701 ggagactatc caagctggcc ctcgccgccg ccgcgtccgc gacgctgctg agcagcccgg
     5761 tgttcgcaca gcagaagacg ttcaatatct ggtggttcga ggatccgacc agttccgagg
     5821 ggatcgcctg gaccaaggcg ctcgacgaat tcaagaccat gcatccggac gtgacggtca
     5881 acttccagca gaagacgttc cagcagctgc aggccgcggg cagcatgatc ctcaattcgg
     5941 accaggctcc ggacgtgctc gaatacaaca agggcaatgc caccgccggc ctcgtcgcca
     6001 gccagggcct gctcaccaac ctcgacgact acgtgaccaa ggaaggctgg gacaagatcc
     6061 tcaacgcggg cgatctcgtg ctgagcaagt atgacgacaa gggcatctac ggctcgggcc
     6121 atgtctgggg catctcggtc tatggcgagt acgtgtcgtg cttctacaac atcgacatgt
     6181 tcaacaaggc cggcctcaag gttccgacca cgatcgacga gtgggtggcc gacatggccg
     6241 ccttccagaa gcagggcgtc acgccgctcg cgcttggcgc catcgacacc agtggccagc
     6301 acctgctcgc ctcgctcgcc tataccaagg ccgacgacac ctgggtgcag
//
LOCUS       DATAZA010000402         1784 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_515231, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000402 DATAZA010000000
VERSION     DATAZA010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_515231"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..744)
                     /locus_tag="VHZ56_10185"
     CDS             complement(<1..744)
                     /locus_tag="VHZ56_10185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298380.1"
                     /translation="MPDVAPSPALVRAALDELLAWQGIARSPQLSQLLRYVVEKALSG
                     DGGSIKAYSIAVDVFGRPATFDPQADPIVRVQARRLRTLLEQFYETGQARAAVQIHLP
                     LGRYVPEFHMPGAQGIADSAGVLAPADVAAAPVGRRSSLARFLRSALLALCFTLIGVA
                     LAVAIIRWTLPPTTPAAAPDVPKVAVGTFDNLTGDAKLDGLVEQFSSDVARGLAQFET
                     VEVAGGGSIVQGAMQRTDGRYSIGAVLGGG"
     gene            1022..1462
                     /locus_tag="VHZ56_10190"
     CDS             1022..1462
                     /locus_tag="VHZ56_10190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298381.1"
                     /translation="MTISANGQPAITLVDDDYHSARLLSRMLDAHGGPFVTRLGDPVA
                     ALDHLVAASAQPLAAGRNMALVDLKASSTATRDFIVALRREAPGLLVTAMAPSLDRDC
                     RSALIDAGATAVFERHADLNLYRQEVANIVGFWVRSQRLDAFGT"
     gene            complement(1520..>1784)
                     /locus_tag="VHZ56_10195"
     CDS             complement(1520..>1784)
                     /locus_tag="VHZ56_10195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018448530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HEX4298382.1"
                     /translation="GAIVVVGLPVDPVRFDVSTASTKELRIETVFRYAHQYDRAINLM
                     ASGRVDLKPLISATFPFEKSVEAFDRAVEARPTDVKLQIRMDS"
BASE COUNT          286 a          648 c          553 g          297 t
ORIGIN      
        1 accgccgccc agcaccgctc cgatggaata tcgcccatcc gtccgttgca tcgccccctg
       61 cacgatggag ccgccgcctg ccacctcgac tgtttcgaat tgtgccagcc cccgtgcgac
      121 atcgctcgaa aactgttcga cgaggccgtc gagctttgca tctcccgtca ggttgtcgaa
      181 tgtgcccacc gccactttcg gcacgtcggg agccgccgcg ggcgtcgtcg ggggtagcgt
      241 ccagcgaatg atcgccaccg ccagcgccac gccgatcagg gtgaagcaca gcgcgagcaa
      301 cgccgatctc aggaaccggg cgagcgagga tcgccgcccg accggcgcgg ccgcgacgtc
      361 ggcaggcgcc agaaccccgg cggaatccgc gatgccctgc gccccgggca tgtggaactc
      421 cggcacatag cgtccgagcg gcagatggat ctgcactgcc gcacgcgcct gccctgtttc
      481 gtagaactgc tccagcagcg tccgcagccg tcgcgcctgc acccgcacga tcggatcggc
      541 ctgcgggtca aaggtcgccg gccggccgaa cacgtcgacg gcgatggaat aggccttgat
      601 cgagccccca tcgcccgaga gcgccttctc gaccacgtag cgcaacaact gcgaaagctg
      661 cggcgagcgc gcaatgcctt gccaggcgag tagctcgtcc agggcggcgc gcaccagcgc
      721 ggggctcggc gcaacgtcgg gcatggccgg actcccccct cctgccgcgc gaaagactgg
      781 gtgttttaca tgtaaaacac aagcgcctta ccctgacttt accccgcccg acctttgcaa
      841 tgcgcgactg catcggcata tgcgccccac tcgctgcaca gtgcggccga ctgctgcacg
      901 tctcttgtgc ccggtcggca ggatctcgga cctccctccc tgctccgtcg cgctccaggg
      961 ccggcgacac aaacctggtt ctgacggcca atcctgccgc gcggcgcggc gaaggacagc
     1021 gatgacgatt tctgccaatg gtcagccggc gatcacgctg gttgacgacg attaccattc
     1081 cgcccgtctg ctgagccgca tgctcgatgc ccatggcggc ccgttcgtca cgcgcctcgg
     1141 cgatcccgtg gcggcattgg accacctggt cgccgccagc gcgcagccct tggccgccgg
     1201 ccgcaatatg gccctggtcg acctgaaggc gtcctcgacc gcgactcgcg acttcatcgt
     1261 ggcgctcagg cgcgaggcgc cgggccttct ggtgaccgca atggccccgt cgctcgaccg
     1321 cgactgccgc tcggcactta tcgatgccgg cgcgaccgcg gtgtttgagc gtcacgccga
     1381 tctcaatctc tatcggcagg aagtcgccaa catcgtcggg ttctgggtgc gctcgcaacg
     1441 cctcgacgca tttggcacct gagccctgga gccacgcgtg ccgggcatct ccggatgttt
     1501 cgcctgactt tccagcgggc tagctgtcca tccgtatctg cagcttgacg tcggtcggcc
     1561 gcgcttcgac ggcacggtcg aacgcctcga ccgatttttc gaaggggaac gtcgccgaga
     1621 tcagcggctt gagatcgacg cgtcccgacg ccatcaggtt gatcgcccgg tcgtactggt
     1681 gggcgtagcg gaagaccgtc tcgatcctca gctccttggt cgaggcggtc gacacgtcga
     1741 accgcaccgg atcgaccggc aggcccacca cgacgatcgc gccg
//
LOCUS       DATAZA010000403         3892 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1559631, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000403 DATAZA010000000
VERSION     DATAZA010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3892
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1559631"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..221)
                     /locus_tag="VHZ56_10200"
     CDS             complement(<1..221)
                     /locus_tag="VHZ56_10200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmdB family metallophosphoesterase"
                     /protein_id="HEX4298383.1"
                     /translation="MRLLFLGDVVGRAGRDAITDRLPGLIAAHGFDLVVINGENASHG
                     RGLTESHFAELRAAGADAVTLGDHAWDQR"
     gene            complement(218..808)
                     /locus_tag="VHZ56_10205"
     CDS             complement(218..808)
                     /locus_tag="VHZ56_10205"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEX4298384.1"
                     /translation="MADPRIEDAKATLRLRARATRGAIPTPARTAAAKSVAEHFFRSV
                     PLRTGEIVAGYWRIKDEMDCQPILIRLMDSFQPVCLPVVLGDDLPLELRLWEQGAALY
                     EAGFGTLAPSELSPQLEPDIIIMPLLGFDRRGTRLGYGGGYYDRTLARLGKRPRLVGI
                     AFAAQELDEVPREAHDVPLDMVVTELGARSFEPATA"
     gene            complement(831..988)
                     /gene="ssrS"
                     /locus_tag="VHZ56_10210"
     ncRNA           complement(831..988)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="VHZ56_10210"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            1103..2848
                     /locus_tag="VHZ56_10215"
     CDS             1103..2848
                     /locus_tag="VHZ56_10215"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HEX4298385.1"
                     /translation="MISQILIVMIAAIAVTLVAERRGIQAPLLLALVGLAGSFIPGLP
                     RLELEPEIILTVVVPPLLFAAAREFSFVSFMRRLGSILNLGVFLVAVTTGIVGAVAAT
                     VVPGMTLAVALVLGAVVSPPDAVTATAIGRKLNLPSSMMTVLKGESLINDAAALTFFT
                     FAIASVAGTPLLIPNVVLYLLYASVGGFILGLLLGAIVHLIRMRIGDSSLATVLTVVV
                     PFTAYLLAEQVGASGVLAVVAAGLSLGHTGSATRYDVRIQEQQFWRTVDALLEAFVFA
                     YIGLQFRWVIADAGEKGFNVAELFGLSLVVLAAVIVVRIGWVYLTAIFSRWQARAAAD
                     RLAKLDRYIAMSPAERTAKVEQLERREGRRGRLAQRLEQAREARTLGGFDLMPAFTWK
                     EDAVISWTGMRGVVTLAAAAGIPLVTASGAPFPGRDVIQVVAFTVTIGTLLLQGLTLP
                     WLIRRLGIASPKEAAIRSEQIKLGEQLTRKATIDAVTVFRDQQTSERPRQLAEKMIAR
                     YDARATRAEDPLAEDDGGELHALAAAIITARRAALVQARDNRLLGDEVMREMLEQMDF
                     EQAVMENWTPARFGG"
     gene            complement(2849..3226)
                     /locus_tag="VHZ56_10220"
     CDS             complement(2849..3226)
                     /locus_tag="VHZ56_10220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEX4298386.1"
                     /translation="MPEVSVEIDGKKYRMACEDGQQAHLLELAGRFNAQVQGLKQTFG
                     EIGDNRLVVMAGIAVLDELAEAERRIEGLKLDIAELTTAGRELTLEAEELEQKFARRL
                     AEAARKIESIATAIDETGAPAAT"
     gene            complement(3219..3497)
                     /locus_tag="VHZ56_10225"
     CDS             complement(3219..3497)
                     /locus_tag="VHZ56_10225"
                     /inference="COORDINATES: protein motif:HMM:NF025122.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4164 family protein"
                     /protein_id="HEX4298387.1"
                     /translation="MTDMEENYDAAAERLDRALQRLDASVRSLNGRIRTHARIEADTQ
                     KLLAERARFASDLEKASAKARRLDDASAEVARRLVVAMDTVNDVLRDA"
     gene            3653..>3892
                     /locus_tag="VHZ56_10230"
     CDS             3653..>3892
                     /locus_tag="VHZ56_10230"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019443563.1"
                     /note="catalyzes the formation of ribose 5-phosphate and
                     xylulose 5-phosphate from sedoheptulose 7-phosphate and
                     glyceraldehyde 3-phosphate; can transfer ketol groups
                     between several groups; in Escherichia coli there are two
                     tkt genes, tktA expressed during exponential growth and
                     the tktB during stationary phase; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX4298388.1"
                     /translation="MTNSQTANDMANAIRSLSMDAVEKANSGHPGLPMGAADVAVALF
                     TKVMKFDPADPHWPDRDRFVLSAGHGSMLLYSALYL"
BASE COUNT          578 a         1246 c         1408 g          660 t
ORIGIN      
        1 tcgcgctggt cccaggcgtg atcgccgagg gtcacggcgt cggcgccggc ggcgcgcagc
       61 tcggcaaaat gcgactcggt caggccgcgg ccgtggctgg cgttctcgcc gttgatcacg
      121 acgagatcga agccgtgcgc cgcaatcagc ccggggaggc ggtcggtgat ggcgtcacgg
      181 ccggcgcggc cgacgacgtc gccgaggaac aggagcctca tgcggtggcg ggctcgaagc
      241 tgcgggcgcc cagttcggtg acgaccatgt cgagcggtac gtcgtgcgcc tcgcggggca
      301 cctcgtcgag ctcctgcgcg gcaaaggcga tgccgaccag ccgcgggcgc ttgccgaggc
      361 gcgcgagcgt gcgatcatag taaccgccgc catagccgag gcgagtgccc cgccggtcga
      421 aacccaacag cggcatgatg atgatgtcgg gctccagctg tggggaaagc tcggagggcg
      481 cgagcgtgcc gaagccggct tcgtagaggg ccgcgccctg ttcccatagc cgcagctcga
      541 gcggcaggtc gtcgcccagc accacgggca ggcagaccgg ctggaacgag tccatcagcc
      601 ggatgaggat cggctggcag tccatctcgt ccttgatccg ccaatagccg gcaacgatct
      661 cgccggtcct gagcggaacc gacctgaaga agtgttccgc taccgatttt gcggcggcgg
      721 tgcgtgccgg cgtgggaatg gcgccccgcg tggcgcgggc ccgaagccgc agcgtggcct
      781 ttgcatcttc gatcctcgga tcagccacgc cgcgccatgc ctcgcagaat tcaggtgcca
      841 ccctggccgt gggatagtcg atcccgggaa cctactcacg taggtgggcg ccgtgtgtcc
      901 gaacccacgg gtccggtcag ggacagctcc cttaaggatc gataaggccc cggggataag
      961 atgatccgca cgcaccgggc agcgagggga atataggcgt catgtgccgg ggacgcaaac
     1021 ggcgcgctca aaatctccac cccttgcgcc agagcgccca accggcttgc gtagcgggcc
     1081 atgcagccgg agagcgtcga gcgtgatttc ccagatcctg atcgtgatga tcgccgccat
     1141 cgcggtgacg ctggtggccg aacggcgcgg catccaggca ccgctgctgc tggcgctggt
     1201 ggggctggcg ggatcgttca tcccgggcct gccaagactg gagctggagc cggagatcat
     1261 cctgacggtg gtggtgccgc cactgctgtt tgcggcagcc cgcgagtttt cgttcgtgag
     1321 cttcatgcgc cggctggggt cgatcctcaa tctgggcgtg ttcctcgtgg cggtgacgac
     1381 cggcatcgtc ggcgccgtcg cggcgacggt ggtgccgggg atgacgctgg ccgtggccct
     1441 ggtgctgggg gcggtggtgt cgccgcccga tgccgtgacc gccaccgcca tcggccgcaa
     1501 gctcaacctg ccgagctcga tgatgacggt gctgaagggc gagagcctga tcaacgatgc
     1561 ggcggcgctc accttcttca cctttgccat cgccagcgtt gccggcacgc cgctgctcat
     1621 tccgaacgtc gttctctact tgctctacgc ctcggtcggc ggcttcatcc tggggctgct
     1681 gctcggcgcc atcgtccacc tgatccggat gcggatcggc gactcgtcgc tggcgaccgt
     1741 gctgacggta gtggtgccgt tcacggctta cctgctggcc gagcaggtcg gcgcgtcggg
     1801 ggtgctggcg gtggttgcgg cggggttgtc gctgggccac accggcagcg cgacgcgcta
     1861 tgacgtgcgc atccaggagc agcagttctg gcgcaccgtc gatgcgctgc tcgaggcgtt
     1921 cgtgttcgcc tatatcgggc tgcagttccg ctgggtcatc gccgacgcgg gtgaaaaagg
     1981 cttcaacgtc gccgaattgt tcgggctgtc gctggtggtg ctggcggcgg tgatcgtggt
     2041 gcgcatcggc tgggtttacc tcacggcgat cttctcgcgc tggcaggcga gggccgcagc
     2101 cgaccggctg gcgaagctcg accggtacat cgccatgtcg ccggcggaac ggacagccaa
     2161 ggtcgagcag ctggagcgcc gcgaggggcg gcgcgggcgg ctggcgcagc ggctcgagca
     2221 ggcccgcgag gcgcggacgc tgggcgggtt cgacctgatg ccggccttca cctggaagga
     2281 ggacgcggtg atctcctgga ccggcatgcg cggcgtggtg acgctggcgg cggcggccgg
     2341 cattccgctg gtgacggcga gcggagcgcc gttcccgggc cgcgacgtga tccaggtggt
     2401 ggcgttcacg gtgaccatcg ggacgctgct gctgcagggg ctgacgctgc cctggctcat
     2461 ccggcggctg gggatcgcca gcccgaagga agcggctatc cgcagcgagc agatcaagct
     2521 cggcgagcaa ctgacgcgca aggcgaccat cgacgctgta acggtgtttc gcgaccagca
     2581 gacgagcgag cggccgcgac agctggccga gaaaatgatc gccaggtacg atgcgcgggc
     2641 gacgcgcgcc gaggacccgc tggcggagga cgatggcggc gagctgcatg cgctggcggc
     2701 ggcgatcatc accgcacgcc gcgccgccct ggtgcaggcc cgcgacaacc gcctgctcgg
     2761 cgacgaagtc atgcgcgaaa tgctcgagca gatggatttc gagcaggcgg tgatggagaa
     2821 ctggacgccg gcgcggttcg gcggctgatc aggtggcggc gggcgcgccg gtctcgtcga
     2881 tcgccgtggc gatggattcg atcttgcggg cagcctcggc caggcggcgg gcgaacttct
     2941 gctcgagttc ctcggcttcg agggtcagct cgcggccggc ggtggtgagc tcggcgatgt
     3001 cgagcttgag gccctcgatg cggcgttctg cctcggccag ctcgtccagc acggcaatcc
     3061 cggccatcac cacgaggcgg ttgtcgccga tctcgccgaa ggtctgcttc agtccctgga
     3121 cctgggcgtt gaagcggccg gcgagttcca gcaggtgggc ctgctgaccg tcctcgcagg
     3181 ccatgcggta tttcttgccg tcgatctcga cgctgacctc aggcatcgcg gagcacgtcg
     3241 ttgacggtgt ccatggcgac gacgaggcgg cgggcgacct cggccgaggc gtcgtcgagc
     3301 cggcgggcct tggccgaagc cttttcgagg tcgctggcga accgggctcg ttcggccagc
     3361 aatttctggg tgtccgcctc gatgcgcgca tgcgtccgga tgcggccgtt gaggctgcgc
     3421 acgctcgcgt cgaggcgctg caacgcccgg tccagccgct cggcggcggc atcgtaattc
     3481 tcttccatgt cggtcatcgt cccgcccgca aatcagctga ctccagccga ggccactata
     3541 aggcgccgtc attgacaggc aaagtgaacc tgttaagcca gttgccgcct tggaagagcc
     3601 cggttttgcg ggcttttcct cgccgttgaa ttctcagaca cgagcggatt tcatgaccaa
     3661 ttcacagacc gccaacgata tggccaatgc cattcgttcc ctcagcatgg acgcggtgga
     3721 gaaggccaat tcgggccatc cgggcctgcc gatgggggcc gccgacgtcg ccgtggcgct
     3781 gttcaccaaa gtcatgaagt tcgatccggc cgatccgcac tggccggacc gcgaccggtt
     3841 cgtgctgagc gccgggcacg gctcgatgct gctctactcg gcgctgtacc tg
//
LOCUS       DATAZA010000404         2732 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1445759, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000404 DATAZA010000000
VERSION     DATAZA010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2732
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1445759"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..288)
                     /locus_tag="VHZ56_10235"
     CDS             complement(<1..288)
                     /locus_tag="VHZ56_10235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004676261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEX4298389.1"
                     /translation="MIPRYSRPQMVAIWSPETRYRIWFEIEAHATFALAELGVVPKEA
                     AQVIWDKGSVAAFDVARIEEIEQTTKHDVIAFLTHLSEIVGPEARFVHQGMT"
     gene            complement(292..969)
                     /gene="rpe"
                     /locus_tag="VHZ56_10240"
     CDS             complement(292..969)
                     /gene="rpe"
                     /locus_tag="VHZ56_10240"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007826210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEX4298390.1"
                     /translation="MPQSVRIAPSILSADFARLGEEIRAVEAAGADYIHVDIMDGHFV
                     PNITIGPVVVEWLRPLTKKTLDCHLMIAPADPYIEAFAKAGADIITVHAEAGPHLHRS
                     LQAIRAAGKRAGVALNPATPVSVLEHVVSSVDLILVMSVNPGFGGQSFIPEAVTKLAQ
                     AKALIGPRPIDLEVDGGINLETAAQVVRAGANVLVAGNAIFSGNDPRTYKPRIKAIRD
                     IATTIRA"
     gene            1120..1857
                     /locus_tag="VHZ56_10245"
     CDS             1120..1857
                     /locus_tag="VHZ56_10245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HEX4298391.1"
                     /translation="MNGLSFPLIFGAGVLSFLSPCVLPLVPPYLTYMSGSSFDQLRTD
                     GATAGLVWRKSVFTSIFFILGFSLVFVTFGATATAFGQAFRQALPIVTPIAGLFIIAM
                     GLHFLGVFRIGLLDRQLRHSGPGAASGPLGGFLLGLAFAVGWTPCIGPVLAAILSVAA
                     VQDTAWQGAGLLGVYSLGLGVPFLLAGIAIGPFLTFFSAFRRHLGTVEKVMGVLLILT
                     GLLFLTGQFTRLSYWFLETFPILQSFG"
     gene            1958..>2732
                     /locus_tag="VHZ56_10250"
     CDS             1958..>2732
                     /locus_tag="VHZ56_10250"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4298392.1"
                     /translation="MAHGAAQVLELGKADDAADIAGDAPFTVAIGHSLDAVEPIWRTL
                     AANGIESPGQSVDFIRLWVGALKIPAADQVYAVASEGQAPVALIALQRRWDKGARVLS
                     WFPGAHVGCNAPVVDVARLRAMSPETRRRLWIALLRGIPSADLVYLKSVPQLLVDGVD
                     LFAELGQFIAADTLYRAAFSSFEEADRTQRNKSRRKHDRQQGEKLEAMGTVTFEALDN
                     GAAAVSALDVMFRQRAARFREMGVVDPFAVPAIRRFYDAT"
BASE COUNT          374 a          965 c          911 g          482 t
ORIGIN      
        1 ggtcatgccc tggtgcacga agcgcgcctc gggcccgacg atctcgctga gatgggtcaa
       61 gaacgcgatc acgtcatgct tggtggtctg ctcgatctcc tcgatccgcg cgacgtcgaa
      121 cgcggcgacg ctgcctttgt cccagatgac ctgcgcggct tccttcggca ccaccccgag
      181 ctcggccagc gcaaaggtcg cgtgcgcctc gatctcgaac cagatgcggt agcgcgtctc
      241 gggcgaccag atcgccacca tttgcgggcg ggaataacgc gggatcatcg gtcaggccct
      301 gatcgtcgtg gcaatatcgc ggatcgcctt gatccgcggc ttgtaggtcc tcgggtcgtt
      361 gcccgaaaag atcgcgttgc cggcgaccag cacgttggct ccggcccgca ccacctgcgc
      421 cgcggtctcg aggttgatgc cgccatcgac ctcgaggtcg atcggccgcg gcccgatcag
      481 cgccttcgcc tgcgccagct tggtgaccgc ctctggaatg aagctctggc cgccgaagcc
      541 ggggttgacg ctcatcacca ggatcaggtc gacgctgctg acgacatgct cgaggacgga
      601 caccggcgtc gccggattga gcgccacgcc cgcccgcttg cccgccgcgc ggatcgcctg
      661 cagcgagcgg tggaggtggg ggccggcctc ggcgtgcacg gtgatgatgt cggccccggc
      721 cttggcgaag gcctcgatgt aggggtcggc cggcgcgatc atcagatggc agtcgagggt
      781 ctttttcgtc agcggccgca gccattcgac gaccaccggg ccgatggtga tgttgggcac
      841 gaaatggccg tccatgatgt cgacatggat gtagtcggcg ccggccgcct cgacggcgcg
      901 gatttcctcg cccaggcgcg caaaatcggc cgagaggatg gaaggcgcga tgcggacgga
      961 ttgcggcatg gggccacccg ggtcagtgcg gacgtatgcc cgatagccgc gcggcacggg
     1021 cagagcaaga gcgggctgcg gctttccggc ggatcacctc cgcttgaggc ggcgttgcgc
     1081 cgccttgcct cggccccggc accctgccaa aagcccggca tgaacgggct gtcgtttccg
     1141 ctgatcttcg gcgccggggt gctgagcttc ctcagcccct gcgtgctgcc gctggtgccc
     1201 ccctacctga cgtacatgag cggctcgagc ttcgaccagt tgcggaccga cggggcgacc
     1261 gccggcctgg tctggcggaa aagcgtcttc acctcgatct ttttcatcct cggcttctcg
     1321 ctggtgttcg tcaccttcgg ggcgacggcc accgctttcg gccaggcctt ccgccaggcg
     1381 ctcccgatcg tcaccccgat cgccgggctg ttcatcatcg ccatgggcct gcacttcctc
     1441 ggcgtcttcc gcatcggcct gctcgaccgg caattgcgcc acagcggccc cggcgccgcc
     1501 agcggcccgc tcggcggctt cctgctcggg ctcgccttcg cggtcggctg gacgccgtgc
     1561 atcggcccgg tgctggccgc catcctgtcc gtcgcggcag tgcaggatac cgcctggcag
     1621 ggcgccgggc tgctcggtgt ctactcgctg ggtctgggcg tgccgttcct tctcgccggc
     1681 atcgccatcg gaccgttcct caccttcttt tcggccttcc ggcgccatct gggcaccgtc
     1741 gagaaagtga tgggggtgct gctgatcctg accggcctgc tgttcctcac cggccagttc
     1801 acccgcctca gctactggtt cctcgagacg ttccccatcc tgcaatcctt cggttaaccc
     1861 tgcgccccga aatcgcccgc cgcgatcgcc gcgggcgcca ttgtgaaccg gcaattcatg
     1921 gcttgccggc gacacttgcg gcaaagcggg gacgacgatg gcgcacggcg cggcacaggt
     1981 gctggaactc ggcaaggcgg acgatgcggc ggacatcgcg ggcgatgctc ccttcaccgt
     2041 cgccattggc cacagcctcg acgccgtcga gccgatctgg cggacgctcg cggccaacgg
     2101 catcgaatcg cccggccaga gtgtcgattt catccggctc tgggttggcg ccctgaagat
     2161 ccctgccgcc gaccaggtct acgcggtcgc cagcgagggt caggcgcccg tggcgctgat
     2221 cgcgctgcag cggcgctggg acaagggcgc gcgcgtgctt tcgtggttcc ccggcgccca
     2281 tgtcggctgc aacgcgcccg tcgtcgacgt ggcacgattg cgcgccatgt cgcccgagac
     2341 ccgccgccgg ctgtggatcg cgctgctgcg cggcatcccc agtgccgacc tcgtctatct
     2401 caaatccgtg ccgcagctgc tggtcgacgg cgtcgacctc ttcgccgagc tgggccagtt
     2461 catcgccgcc gatacgctct accgcgccgc cttttcgagc ttcgaggagg ccgaccggac
     2521 gcagcgcaac aaatcgcgcc gcaagcacga ccgccagcag ggcgaaaagc tcgaggccat
     2581 gggcacggtg acgttcgagg cgctggacaa cggcgccgcc gcggtgtcgg cgctcgacgt
     2641 gatgttccgc cagcgggccg cccgcttccg cgagatgggg gtagtcgatc ccttcgcggt
     2701 cccggccatc cgccggttct acgacgcgac gg
//
LOCUS       DATAZA010000405         4290 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1908378, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000405 DATAZA010000000
VERSION     DATAZA010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4290
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1908378"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..192)
                     /locus_tag="VHZ56_10255"
     CDS             complement(<1..192)
                     /locus_tag="VHZ56_10255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016553303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase P60"
                     /protein_id="HEX4298393.1"
                     /translation="MTPEAVVAAARQWLGTPYRHQGATLGAGCDCLGLLRGVWRTLYG
                     GEPLVLPNYRADWRDGRHAG"
     gene            complement(189..1079)
                     /locus_tag="VHZ56_10260"
     CDS             complement(189..1079)
                     /locus_tag="VHZ56_10260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2163 domain-containing protein"
                     /protein_id="HEX4298394.1"
                     /translation="MRTLDLGFKAHIESGATTLATCWKLLRTDGVVLGFTDHDLPLSF
                     DGTDYAPNDGLDGGTVDGKLGAQVDTTEVVGVLSSDAIAEADIAIGRYDGATVETWRV
                     NWRDVSQRLLLSRTTIGEIVREDGQFRAELRSGQQGLNQTRGRLYGALCDATFGDARC
                     TVDVTAPAYSATATVVAVRDRNSLALSGLGGFAAGWFSLGRGSWTSGARAGLTDAVMS
                     HVREGSTDILSFVQPVGDRVVAGDTLTAIAGCDRAFATCRDRFANTVNFRGFPHIPGN
                     DFVLTYPRSGDALDGAALFP"
     gene            complement(1076..1702)
                     /locus_tag="VHZ56_10265"
     CDS             complement(1076..1702)
                     /locus_tag="VHZ56_10265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2460 domain-containing protein"
                     /protein_id="HEX4298395.1"
                     /translation="MAFHAVRFPLDIALGAHGGPERATDIVTLSSGREERNSRWANSR
                     RRYNAGYGVKSRADMQAVLAFFEERRGRFHSFLWRDALDCSSNGGDGTPAPLDQAIGT
                     GDGTKTAFQLTKTYGASFDPYARPITKPEAGSVRVAVGGTELTTGWSVDTTTGIVTFA
                     SAPATAAAITAGFLFDVPVRFDTDRLDIELTSFDAASAPAIPLLEVNE"
     gene            complement(1702..2247)
                     /locus_tag="VHZ56_10270"
     CDS             complement(1702..2247)
                     /locus_tag="VHZ56_10270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HEX4298396.1"
                     /translation="MADSFPDSFSSGLDDVSGELKRIGDLADGVGRSLSNAFRGAITD
                     GKSLKGVLADVAEAFADIALKAALKPVGDLISGAVANLFAATDPSLGGVTAFASGGVV
                     NAPTYFPTAGGMALAGEAGPEAIMPLSRGSDGRLGLAGGSGAVTVNFNVTAPDARSFT
                     ASEAEISAMLLRAVKRGTRAS"
     gene            complement(2237..2428)
                     /locus_tag="VHZ56_10275"
     CDS             complement(2237..2428)
                     /locus_tag="VHZ56_10275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rcc01693 family protein"
                     /protein_id="HEX4298397.1"
                     /translation="MTPFPWQAAMRLGFGVLRLSSKEFWGLTPRELAAAFEAWSGPRS
                     RPPDRNGLDRLMERFPDGR"
     gene            complement(2425..2739)
                     /locus_tag="VHZ56_10280"
     CDS             complement(2425..2739)
                     /locus_tag="VHZ56_10280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gene transfer agent family protein"
                     /protein_id="HEX4298398.1"
                     /translation="MANIHRGEIAATIGGEARTLCLTLGALAELEARLGGGDLVGLGE
                     RFAAGRVSARDLIAILGAGLRGAGHALSDDDLARMAIEGGLTGAAEIAARLLRATFGG
                     EP"
     gene            complement(2739..3152)
                     /locus_tag="VHZ56_10285"
     CDS             complement(2739..3152)
                     /locus_tag="VHZ56_10285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail protein, TP901-1 family"
                     /protein_id="HEX4298399.1"
                     /translation="MAAQSGKDMLVKLDQTGSGSFLTVAGLKTRSLSFNAASVDITDA
                     ESAGRWRELLAGAGIKRASVSGSGIFKDQDSDAQIRQLFFDGTIRNWQLILPGFGTVA
                     GPFQITALEFSGDHAGEVTFDIALESAGELTFTAL"
     gene            complement(3162..3563)
                     /locus_tag="VHZ56_10290"
     CDS             complement(3162..3563)
                     /locus_tag="VHZ56_10290"
                     /inference="COORDINATES: protein motif:HMM:NF022810.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3168 domain-containing protein"
                     /protein_id="HEX4298400.1"
                     /translation="MTHPIVELQASLVAALRADTTLSALAPVSDGPPAGAAPPYAVIA
                     RHDVLAHDGDTTPGNEHRVLVHAWAADASRKAVLAIAERIVDVALAAALGSEALAVTL
                     ARHDRTDTAIDAATGRARAAIALTFYSEPIS"
     gene            complement(3560..3898)
                     /locus_tag="VHZ56_10295"
     CDS             complement(3560..3898)
                     /locus_tag="VHZ56_10295"
                     /inference="COORDINATES: protein motif:HMM:TIGR01563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage head closure protein"
                     /protein_id="HEX4298401.1"
                     /translation="MSGAPTIGALTDRVDLKRRTTTDEAEGGEAVSFVPIATVWARVT
                     TLAARQALAGDARGQAISHAVVIRFRTDLKPGDRIVYRGATLDIAATGDLTGGRAYLS
                     CQCTEQAVTG"
     gene            complement(3895..>4290)
                     /locus_tag="VHZ56_10300"
     CDS             complement(3895..>4290)
                     /locus_tag="VHZ56_10300"
                     /inference="COORDINATES: protein motif:HMM:TIGR02215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016032 - viral process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="head-tail connector protein"
                     /protein_id="HEX4298402.1"
                     /translation="ALIAAARLQVEGSTGRALVTQSWRLALDRPAGRLVPLPAVPVAT
                     LVAVTVDGQSVDAALQGDCVLLPAPATQSLSIDYTAGYGDAAAVPADLQQAVLVLIAY
                     WFENRDAAAPAQLPSGFDRLLATYRRVQL"
BASE COUNT          616 a         1584 c         1482 g          608 t
ORIGIN      
        1 accggcgtgc cgcccgtcgc gccagtcggc gcgatagttg ggcagcacca gcggctcgcc
       61 gccgtagagc gtccgccaca cgccgcgcag cagcccgagg caatcgcagc cggcgcccag
      121 cgttgcgccc tggtgccggt aaggcgtgcc cagccattgc cgcgccgccg ccaccaccgc
      181 ttccggcgtc atgggaagag tgcggcgcca tcgagcgcgt cgccgctgcg cggataggtc
      241 agcacgaaat cattgcccgg gatgtgcggg aagccacgaa aattcacggt gttggcgaag
      301 cggtcgcggc acgtcgcgaa cgcccggtcg cacccggcga tcgccgtcag cgtgtccccc
      361 gcgaccaccc ggtcgccgac cggttggacg aaactcagga tgtcggtcga gccctcgcgg
      421 acatgactca tcaccgcgtc ggtcagcccg gcgcgcgcgc ccgacgtcca gctgccgcgc
      481 ccgagcgaga accagcccgc ggcgaagccg ccgagcccac tcagtgccag gctgttgcga
      541 tcgcgcaccg ccaccaccgt cgcggtcgcc gaataggccg gagcggttac gtcgaccgtg
      601 cagcgcgcgt cgccgaacgt cgcgtcgcag agcgcgccgt agagccggcc gcgcgtctgg
      661 ttcagcccct gttggccgga ccgcaactcg gcgcggaact ggccgtcctc gcgcacgatt
      721 tcgccgatag tcgtgcggct cagcagcaac cgctgcgaca cgtcgcgcca gttgacgcgc
      781 caggtctcga ccgtcgcgcc gtcgtagcgg ccgatggcga tatcggcctc ggcgatcgcg
      841 tcggaactca gcactccgac gacctcggtg gtatcgacct gtgcgccgag cttgccgtcc
      901 accgtgccgc cgtcgagccc gtcgttcggg gcgtaatcgg tgccgtcgaa gctcagcggc
      961 agatcgtggt cggtgaagcc gagcacgacg ccgtcggtgc ggagcagctt ccagcaggtc
     1021 gcgagggtcg tcgcgccgct ctcgatatga gccttgaagc cgaggtcgag cgtcctcatt
     1081 cgttgacctc gagcagcggg atggccgggg cgctcgccgc atcgaagctg gtcagctcga
     1141 tgtcgagccg gtcggtgtcg aagcgcaccg gcacgtcgaa caggaaccca gcggtgatcg
     1201 cggcggccgt agccggcgcg ctggcgaagg tcacgatgcc ggtcgtcgtg tcgacgctcc
     1261 agccggtcgt gagctcggtg ccgcccaccg ccactcgcac gctgccggcc tccggcttgg
     1321 tgatcggccg cgcataggga tcgaagctcg cgccataggt cttcgtcaac tggaacgcgg
     1381 ttttcgtgcc gtcgccggtg ccgatcgcct ggtcgagcgg ggccggcgtg ccgtcgccgc
     1441 cattgctcga gcagtccagc gcgtcgcgcc acaggaacga atggaagcgg ccgcggcgtt
     1501 cctcgaagaa ggccagcacc gcctgcatgt cggcccgcga tttcacgccg tagccggcat
     1561 tgtagcgccg gcgcgaattg gcccagcgcg agttgcgctc ctcgcggccg ctcgacagcg
     1621 tgacgatatc ggtcgcccgt tccggcccgc catgcgcgcc gagcgcgatg tcgagcggaa
     1681 acctcaccgc gtgaaacgcc atcagctggc cctcgtgccg cgcttgacgg cgcgcagcag
     1741 catggccgag atctcggcct cgctcgccgt aaagctgcgg gcgtccggcg ccgtcacgtt
     1801 gaagttgacg gtcaccgcgc cgctgccgcc cgcgaggccg agccggccgt cgctgccgcg
     1861 gctcagcggc atgatggcct cggggcccgc ttcgccggcc agcgccatgc cgccggccgt
     1921 cgggaaatag gtcggcgcgt tgaccacgcc gccgctggcg aacgccgtga ccccgccgag
     1981 cgacggatcg gtcgcggcaa acaggttcgc caccgcccct gagatcagat cgcccaccgg
     2041 cttcagcgct gccttcagcg cgatgtcggc gaacgcctcg gcgacgtcgg ccagcacgcc
     2101 cttgagcgat ttgccgtcgg tgatggcgcc gcggaaggca ttgctcagcg agcggccgac
     2161 gccatcggcg aggtcgccga tgcgcttgag ctcgccgctg acgtcgtcga gcccgctcga
     2221 aaagctgtcg ggaaaactat cggccatcgg ggaagcgctc catcaatcga tccagtccgt
     2281 tgcgatcggg tggccgcgac cgcgggccgc tccacgcctc gaacgcagcg gcgagttcgc
     2341 gcggggtcag gccccagaat tccttcgacg acagccgcag cacgccgaag ccgagccgca
     2401 tcgccgcttg ccagggaaac ggtgtcacgg ctcgcccccg aaggttgcgc gcagcagccg
     2461 cgccgcaatc tcggcggcgc ccgtcagccc gccctcgatc gccattcggg cgaggtcgtc
     2521 gtcgctgagc gcgtggccgg cgccgcgcag ccccgccccg aggatcgcga tcaagtcgcg
     2581 cgccgacacc cggccggcgg cgaagcgctc gcccagtccc accaggtcgc cgccgccgag
     2641 ccgggcctcg agttcggcca gcgcccccag cgtcaggcac agcgtccgcg cctcgccacc
     2701 gatggtggcg gcaatctcgc cgcgatggat gtttgccatc agagcgccgt gaacgtcagt
     2761 tcgccggcgc tctcgagcgc gatgtcgaac gtcacctcgc ccgcatggtc gccggaaaac
     2821 tccagcgccg tgatctggaa cggcccggcc accgtgccga agccgggcag gatcagctgc
     2881 cagttccgga tggtgccgtc gaagaacaac tgccggatct gcgcgtccga gtcctggtcc
     2941 ttgaagatgc cgctgccgct gaccgaagcg cgcttgatgc cggcgccggc caggagctcg
     3001 cgccagcgcc cggcactctc ggcgtcggtg atgtccaccg atgccgcgtt gaagctcagc
     3061 gagcgagtct tcagtcccgc cacggtcagg aaactgcccg atccggtctg gtcgagcttg
     3121 accagcatgt ccttgccgct ctgggctgcc atggaaaatc cttagctgat gggttcggaa
     3181 taaaaggtga gcgcaatcgc cgcccgggcc cggcccgtcg cggcgtcgat agcggtgtcg
     3241 gtgcggtcgt gccgcgccag cgtcaccgcc agcgcctcgc tgccgagtgc tgccgccagc
     3301 gccacgtcga cgatccgctc ggcaatcgcc agcaccgctt tgcggctggc gtcggcggcc
     3361 caggcgtgga cgagcacgcg atgctcgttg cccggcgtcg tgtcaccgtc atgcgccagc
     3421 acatcgtgcc gggcgatgac ggcgtagggc ggcgctgcgc cggccggcgg cccgtccgac
     3481 accggggcca gcgcgctgag cgtggtatcg gcgcgcagcg ccgccaccag gctcgcctgc
     3541 agctcgacga tcggatgggt catcccgtca ccgcctgctc ggtgcactgg cagctcagat
     3601 acgcccggcc gccggtgagg tcgccggtcg ccgcgatgtc gagggtcgcg ccgcgataga
     3661 cgatgcggtc gcccggcttg aggtcggtgc ggaagcggat caccaccgcg tggctgatcg
     3721 cctggccgcg cgcgtcgccg gccagcgcct gccgcgccgc cagcgtcgtc acccgcgccc
     3781 acaccgtcgc gatcggcacg aagctcaccg cctcgccgcc ctcggcttcg tcggtcgtgg
     3841 tccggcgctt taggtcgacc cggtcggtca gcgcaccgat cgtcggggcg ccactcacag
     3901 ctgcacccgg cgataggtcg ccagcaggcg gtcgaacccc gagggcaact gtgccggcgc
     3961 cgccgcgtcg cgattctcga accagtaggc gatgagcacc agcaccgcct gctgcaggtc
     4021 ggccggcacg gcggccgcgt cgccatagcc cgcggtgtag tcgatgctga ggctctgcgt
     4081 cgccggcgcg gggagcagca cgcagtcgcc ctgcagcgcc gcgtcgaccg attggccgtc
     4141 gaccgtcacg gcgacaagag tggccaccgg caccgccggc agcggcacca gcctgccagc
     4201 gggacgatcg agcgccagcc gccagctctg ggtcaccagc gcccggccgg tgctgccctc
     4261 gacctgcagc cgcgccgcgg cgatcagcgc
//
LOCUS       DATAZA010000406         3674 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3072887, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000406 DATAZA010000000
VERSION     DATAZA010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3674
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3072887"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(48..971)
                     /locus_tag="VHZ56_10305"
     CDS             complement(48..971)
                     /locus_tag="VHZ56_10305"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX4298403.1"
                     /translation="MIFPVESQSRVRTAPALPLATRLGAVHIAVTDRDRALAIWRDVV
                     GLELMSEEGNALRLGVGGKVLIVLETGAVRPVVQKTTGLYHVAIHVPKRTDMAQFAIR
                     ALQRNVRIAPTDHLVSEAIYLWDLDGNGIEMTFETPWRGHLGDPESGSYATTIDGKPH
                     SGREPIDLQQMLGELGPNPALEATLPAGTRIGHVHVHVNSLEDSMEFYRDGLGFGGLF
                     LIRQFGMGDVGLDYSPHTIAFNIWSGINAAQAPAGSAGLRWFTVIVPNEQALDDVRAR
                     LTAHHYAFGDIGGGIEVRDPSNNLVRVVNGG"
     gene            complement(1097..1984)
                     /locus_tag="VHZ56_10310"
     CDS             complement(1097..1984)
                     /locus_tag="VHZ56_10310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298404.1"
                     /translation="MMLRSWRALFVREYLEHRIAFLYFPGGIIVLLALSALSAVSVNR
                     LHVFSQFLVPEGLKVFEIGYLVLLALWFAYLAVTLFFYFGDAFSADRRNNAMFFWKSM
                     PVSDLRILVSKLLAGIVMFPLIILCVAAITGLLHYGAVNLAHLQLPGLIPPPPIAALT
                     SFAELTGFALVYLAVAMLWYVPFLAWVGGLSTIFGRWSLPLAFVIPGLVAVVENIVFF
                     GNGPRGGYVWGYLSRRWSFGLADADYAQMVVSPTPFDAPTYISRLFAETDWLSVVTGL
                     VFAALVIWLASQYRRRRIS"
     gene            complement(1981..2847)
                     /locus_tag="VHZ56_10315"
     CDS             complement(1981..2847)
                     /locus_tag="VHZ56_10315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4298405.1"
                     /translation="MTDPIVSVHGLRKKFGRLEILHGLDFDIPPGRIYGLIGHNGAGK
                     TTTLNAMLGLTSSEGAVRVLGLDPYRHRARLMRDVAFISDVASLPRFLKVRELFRMLT
                     DIHPNFSAERAASFLEGTEVRPGALIGHLSKGMLAQLHLAVVMAIDARLLVLDEPTLG
                     LDITYRKRFYRRLLEDYMNAGRTLLITTHQVDEIEFMLTDIMFIRDGALILHSPMDQV
                     SARYTQLIVAPDKLDAAAALAPVFRESRFGQTVLVFDGADRDALAQFGAVSTPSLSDL
                     FVALMSRDGGGK"
     gene            complement(2862..>3674)
                     /locus_tag="VHZ56_10320"
     CDS             complement(2862..>3674)
                     /locus_tag="VHZ56_10320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX4298406.1"
                     /translation="ATFLAECRLLSPESYDAAHGAVEKARSDLDFIRLDEESFARAPN
                     ISVDYAIFEKTRLISLIPVSFPWSDLGSWDAVWKVSAKDAAQNAVLGDATLSNTSNSF
                     VLSEKAHVAVEGLDDVAVIATEDAVYVGRLSEAQKVGQMVKTLKASPGTVGITEIHRT
                     AYRPWGGYSSVLNGARFQVKRLFVKPGKKLSLQKHHHRAEHWIVVSGTAEVTIDGTVS
                     MLSENESIYLPLGCVHRLANPGKILLELIEVQTGSYLGEDDIIRIEDEFGRA"
BASE COUNT          675 a         1133 c         1303 g          563 t
ORIGIN      
        1 gtggcgctcg acatcacgcc ggcgctgctg cccaaatcca tcgacctcta gccgccgttc
       61 acgacccgca cgaggttgtt cgagggatcg cgcacctcga tgccgccacc gatatcgccg
      121 aacgcgtagt ggtgcgccgt caggcgggca cggacatcgt cgagcgcctg ctcgttcgga
      181 acgatcaccg tgaaccagcg cagccccgcc gagcccgccg gcgcctgggc ggcattgatc
      241 cccgaccaga tgttgaaggc gatggtgtgc gggctgtaat cgagcccgac gtcgcccatg
      301 ccgaactggc ggatcaggaa caagccgccg aagcccagcc cgtcgcgata gaactccatc
      361 gagtcttcga ggctgttgac gtggacgtgg acgtggccga tgcgggtgcc cgcgggaagc
      421 gttgcctcga gagccgggtt ggggccgagt tcgcccagca tctgctgcag gtcgatcggt
      481 tcgcggccgg agtgcggctt gccgtcgatg gtagtggcgt agctgccgga ttccgggtcg
      541 cccagatggc cgcgccacgg agtctcgaag gtcatctcga tgccgttgcc gtcgaggtcc
      601 cacagataaa tggcttccga caccaggtgg tcggtcggcg cgatgcgcac attgcgctgc
      661 agcgcacgga tggcgaactg ggccatgtcg gtgcgcttgg gcacgtggat ggccacatga
      721 tagagcccgg tggtcttttg tacgaccggc cgaacggcgc ccgtctcgag cacgatcagc
      781 accttgccgc cgacgccgag gcgcagcgca ttgccctcct ccgacatcag ctcgagcccg
      841 accacgtcgc gccagatcgc cagcgccctg tcgcggtcgg tcacggcgat gtggaccgcg
      901 ccgagacggg tggcgagcgg cagggcgggc gcggtgcgca cgcgcgactg ggattcgacg
      961 gggaagatca tcttcgcctc cacaagggaa cggcttccat ataggcgcct gacgaggcgg
     1021 acggaacggc ggacggttca accgcaccga agggttcgtt cgcagaggcc agccaatcct
     1081 gcagcccgtg gtcgtctcag gaaatgcggc ggcggcgata ctggctggcc agccagatga
     1141 cgagtgctgc aaagacgagg ccggtgacga cgctcagcca gtcggtttcg gcgaacagcc
     1201 gggaaatgta ggtgggcgcg tcgaagggcg tgggcgagac aaccatctgg gcgtagtcgg
     1261 catcggcgag accgaacgac cagcggcggc tgagatagcc ccagacatag ccgccgcgcg
     1321 gaccgttgcc gaaaaagacg atgttttcga cgacggcgac cagcccggga atgacgaaag
     1381 cgagcggcag gctccagcgg ccgaagatgg tcgacaggcc gccgacccag gcgaggaacg
     1441 gcacgtacca gagcatggcg acggcaagat agaccagcgc aaagccggta agctcagcga
     1501 agctggtgag cgccgcaatc ggcggcggcg ggatcaggcc cggcaactgc aaatgggcga
     1561 ggttgacggc gccatagtgc aggagcccgg tgatcgccgc gacgcagagg atgatcagcg
     1621 ggaacatgac gatcccggca aggagcttcg agacgaggat gcgcaggtcg gagaccggca
     1681 tcgacttcca gaagaacatc gcgttgttcc ggcggtcggc gctgaaggcg tcgccgaagt
     1741 agaagaacag cgtcaccgcg aggtacgcga accacagcgc cagcagcacg aggtagccga
     1801 tctcgaagac cttcagcccc tcgggcacga ggaactgcga gaacacgtgc aggcgattga
     1861 cgctcaccgc cgagagcgcc gacagcgcca gcagcacgat gatgccgccc gggaaataca
     1921 ggaaggcgat gcggtgctcg agatattcgc ggacgaagag ggcgcgccag gaccgcagca
     1981 tcatttgcct ccgccgtcgc ggctcatcag cgccacgaac aggtccgaca ggctcggggt
     2041 cgacactgcg ccgaactgcg ccagcgcatc gcggtcggca ccgtcgaaga cgagcaccgt
     2101 ctggccgaag cggctttcgc ggaagaccgg ggccagcgcc gctgcggcat cgagcttgtc
     2161 gggcgcgacg atcagctggg tgtagcgcgc gctcacctgg tccatcggcg aatggaggat
     2221 cagggcgccg tcgcggatga acatgatgtc ggtcagcatg aactcgatct cgtccacctg
     2281 gtgggtggtg atgagcaggg tccggccggc gttcatgtag tcctcgagca ggcggcggta
     2341 gaagcgcttg cgataggtga tatcgagtcc cagcgtcggc tcgtcgagca ccagcaggcg
     2401 cgcgtcgatg gccatgacca cagccaggtg aagctgcgcc agcatgccct tggagagatg
     2461 gccgatcagc gctccgggcc ggacctcggt gccctcgagg aagcttgcgg cccgctcggc
     2521 ggaaaagttc gggtggatgt cggtgagcat gcggaacagc tcgcgcacct tgaggaagcg
     2581 cggcaggctg gcgacatcgg agatgaaggc gacgtcgcgc atgagccgcg cccggtggcg
     2641 atagggatcg aggccgagga cgcgcaccgc cccctcggac gaggtgagcc cgagcatggc
     2701 gttgagggtc gtcgtcttgc cggcgccgtt gtggccgata aggccgtaga tgcggccggg
     2761 cgggatgtcg aaatcgaggc cgtggaggat ctccaggcgg ccgaatttct tgcgcagccc
     2821 atgcaccgag acgatcggat cggtcatctc cccctccccc ctcacgcgcg gccgaattcg
     2881 tcctcgatgc ggatgatgtc gtcctcgccg aggtaggagc cggtctgtac ctcgatcagc
     2941 tccagcagga tcttgccggg attggcgagg cggtgcacgc agccgagcgg caggtagatc
     3001 gactcgttct cgctcagcat gctgacggtg ccgtcgatgg tcacctcggc ggtgccggag
     3061 accacgatcc agtgttcggc gcggtggtgg tgcttctgca ggctcagctt cttgccgggc
     3121 ttgacgaaca gccgcttcac ctggaagcgg gcgccgttca ggaccgacga gtagccgccc
     3181 cacggccggt aagccgtgcg gtggatttcg gtgatgccga cggtgccggg gctggccttg
     3241 agggtcttga ccatctggcc gaccttctgc gcctcgctca ggcggccgac atagaccgcg
     3301 tcttcggtgg cgatgacggc gacatcgtcg aggccttcga cggcgacgtg cgccttctcg
     3361 ctgaggacga acgagttgct ggtgttcgac agcgtcgcgt caccgagaac ggcgttctgc
     3421 gccgcatcct tggcggagac tttccagacg gcatcccagc tgccgaggtc ggaccagggg
     3481 aagctgacgg ggatcagcga gatcagcctg gtcttttcga agatcgcgta atcgaccgag
     3541 atattgggcg cccgcgcaaa gctctcctcg tcgaggcgga tgaaatcgag atcggaacgc
     3601 gccttctcga cggcgccgtg cgcggcgtcg tagctctcgg gcgacagcaa gcggcattcg
     3661 gcgaggaacg tcgc
//
LOCUS       DATAZA010000407         4232 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_982346, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000407 DATAZA010000000
VERSION     DATAZA010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4232
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_982346"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..2149
                     /gene="alaS"
                     /locus_tag="VHZ56_10325"
                     /pseudo
     CDS             1..2149
                     /gene="alaS"
                     /locus_tag="VHZ56_10325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012651592.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="alanine--tRNA ligase"
     gene            complement(2138..3115)
                     /locus_tag="VHZ56_10330"
     CDS             complement(2138..3115)
                     /locus_tag="VHZ56_10330"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX4298407.1"
                     /translation="MPVGVIFALSAYALYSCCDAITKGLGSGLSIYEIAFFTTLFSLL
                     PAIFTTPRGENWLTFWKIRHPLLLNLRGLTGMIGNLCIIYAFVTIPLAEAYSLAFLAP
                     IFIVFISVQLLAEKVSPQRWLLLGASFVGVLIVVRPGFRELHWGHLAAVVAAVCGAVT
                     TSVLRRIAKEEARTSLIGVASIYVLVVNGVLIVATGGFQQLTWQQLAWLLTIGGLGGT
                     GNLLFIAATRNAPASMVAPVQYSQILWAIVFGAVFYAEYPATIAYLGLAAIIVAGIFN
                     VLSEETRIRIFSRLSPNGAGPATLEESSTAADAVLEAPIAGAAEATSER"
     gene            complement(3243..3644)
                     /locus_tag="VHZ56_10335"
     CDS             complement(3243..3644)
                     /locus_tag="VHZ56_10335"
                     /inference="COORDINATES: protein motif:HMM:NF045421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298408.1"
                     /translation="MAKGTKDDPWQLKTPPGTSEIMLWRDPAANPPALVCLAGGTELR
                     YHISAPEDLAAMLKAHGDWMELGNADEQKPAKDGSIEAWARSPDNPKKGWYGLKKGLR
                     GRFANYVTPVAEALGLVELEHGPRNNRARAK"
     gene            complement(3644..4084)
                     /locus_tag="VHZ56_10340"
     CDS             complement(3644..4084)
                     /locus_tag="VHZ56_10340"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX4298409.1"
                     /translation="MDDTLTRTIALQCSVEHAFDVFTRMVDLWWPRGHRRTREASLHF
                     DPVTGGRLIERAADGSERTMAEVRRADPPRFLSLDWFPGSPAAPTAVEISFAATPTGT
                     EITVVHRALTAEAKSIWPQRVARFAEGWERVLPALRQFTVEEDN"
BASE COUNT          700 a         1478 c         1415 g          639 t
ORIGIN      
        1 gggcgacacc ggcccgtgcg gcccctgctc ggagatcttc tacgaccacg gcgaccagta
       61 ctggggcggc cctccgggct cgcccgagga agacggcgac cgcttcgtcg agatctggaa
      121 tctcgttttc atgcagttcg aacagctggc cgacggttcg cgcacgaacc tgccgcgtcc
      181 ctccgtcgac accggcgccg gcctcgagcg cgtcgccgcc gtcatgcagg gcaccaacaa
      241 caactacgac atcgacctgt tccgcacgct gatcgctgcc gcccagcagg cgaccggcta
      301 caacggcgat ccggccaatc cgagcctgcg cgtcatctcc gaccacctgc gctcgatgag
      361 ctttctcatc gccgaaggcg ttttgccctc caacgaaggc cgcggctacg tgctgcgccg
      421 catcatgcgc cgcgccatgc gccacgccac gctgctcggc gcccaggagc cggtgatcca
      481 tcgcatcgtc cccaccctgg tgcgcgagat ggggcaggcc tacccggagc tggtgcacgg
      541 cgagcagatg atcgaggaga ccgtccggct cgaggagcag cggttcctca agaccttgag
      601 ccgcggcctc gccatcctcg acgaagcgac ggctggtctg ggcaagggcg acatgctcga
      661 gggcgtcacc gcgttcaagc tttacgacac cttcggtttc ccgctcgacc tgacgcagga
      721 cgcgctgcgc acccgcggca tcaatgtgga actgtcgggc ttcgaggatg ccatggccag
      781 gcagcgtgcc gaggcgcgca agagctgggc cgggtcgggc gaggccggcg aggacaaggt
      841 gtggttcgcc gtggccgaca aggtcggccc caccgagttc ctcggctacg agaccgaagc
      901 ggccgagggc gccgtcaccg cgctcgtcaa gggcgggcag atggtcgacc agcttgccgc
      961 cggcgacgag ggatttgtcg tcctcaacca aacgccgttc tacggcgaga gcggcggcca
     1021 ggtcggcgac actggcagcc tgcagggcga tggcatcgcc gccgaaatcg tcgatacggt
     1081 caagcacagc ggcgtcttcg gccaccgcgt caaggtcacc gccggcacca tccgcgtcgg
     1141 cacgccgctg gcgctcgtcg ttgaccacgc ccgccgctcc gccatccgcg ccaaccactc
     1201 ggcgacgcac ctccttcacg aggcgctgcg actggtgctg ggcgaccatg tggcgcagcg
     1261 cggctcgctg gtctcgcccg accgcctgcg cttcgacttc gtccactcca agccggtcac
     1321 gacgcaggag ctggctcagg tcgaggatat cgccaacgat atcgtgctcg ccaacgcgcc
     1381 ggtcgagacc cggctgatga acctcgacga tgcgcgccag tccggcgccc gcgccctgtt
     1441 cggcgagaaa tacggcgacg aagtgcgggt cgtctcgatg ggcgacccga ccggcaatgc
     1501 gctgggctgg tccgtcgaac tctgcggcgg cacgcacgtg cggcgcaccg gcgacatcgg
     1561 gctcatcacc gtgctcggcg acagcggtgt ttccgccggc gtccgtcgca tcgaggcgct
     1621 gacggcgcgt ggcgcccgcc atcacgcgtg aaccaacgcc aatctcgtcc agagcgcggc
     1681 cgaccagttg cacaccacgc cgtcggaaat cctgacgcgc gtcgagacct tgcaggacaa
     1741 cctccgcaag tccgagcgcg ccctgagcga ggcacagaag aagctcgcgc tcggcggctc
     1801 gggcggcagc gcgccggcga ccgaggccgt caacggcacg gccttcgttg gccgggcggt
     1861 cgaaggcatc gccgccaagg atcttcgtgg cctcgtcgac caggagaaaa agaagctcgg
     1921 ctccggcgtc gtggcgctcg tcctcaaggg cgacgacggc aagggcaccg tcgccgtcgg
     1981 cgtcaccgac gacctgactg cgaggttttc ggcggccgaa ctgatcaagc gcgcgacggt
     2041 cgcgctcggc gggcagggcg gtggcggccg gccggacatg gcgcagggcg gcggaccgga
     2101 tggatcgaag gccgccgacg cgatcgccgc agtgcgctca gcgctctgag gtcgcctcgg
     2161 cggcgccggc gattggcgcc tccagcaccg catcggccgc cgtcgagctt tcctcgagcg
     2221 tcgccggccc cgcgccgttc ggtgacagcc gcgagaagat gcggatgcgg gtctcctcgc
     2281 tcagcacgtt gaagatgccg gcaacgatga tggcggcgag cccgagatag gcgatggtgg
     2341 ccggatattc ggcgtagaac accgctccga acacgatcgc ccacaggatc tggctgtact
     2401 gcaccggcgc gaccatgctg gccggggcgt tgcgcgtcgc cgcgatgaac agcagattgc
     2461 cggttcctcc gaggccgccg atggtcagca gccacgccag ctgctgccag gtgagttgct
     2521 ggaacccgcc ggtcgcgacg atcagcacgc cgttgacgac gaggacgtag atcgaggcga
     2581 cgccgatgag gctcgtccgc gcctcctcct tggcgatgcg ccgcagcacc gaggtcgtca
     2641 ccgcgccgca caccgcggca accaccgccg ccagatgccc ccagtgcagc tcgcggaagc
     2701 cgggccgcac cacgatcagc acgcccacga agctcgcccc cagcagcagc cagcgttgcg
     2761 ggctcacctt ctcggccaat agctgcaccg agatgaagac gatgaagatc ggcgcgagga
     2821 acgccagcga atacgcttcg gccagcggaa tggtgacgaa ggcatagatg atgcagaggt
     2881 tgccgatcat gccggtgagg ccgcgcaggt tgagcagcag cgggtgcctg atcttccaga
     2941 acgtcagcca gttctcgccg cggggcgtcg tgaagatcgc cggcagcagc gagaacaggg
     3001 tcgtgaaaaa agcgatctcg tagatgctga ggccgcttcc cagtcccttg gtgatggcat
     3061 cgcagcacga atagagcgcg taagcgctca gggcaaagat gacgccgaca ggcatcggaa
     3121 gagacccggg aaatgactcg aatgagcccc tcgactatac ggccacctgc aggtcgcgtc
     3181 gatggctgac atgttagatt tttcgccgaa tgccgccggt tcggcgccct cgcggatcgc
     3241 cgctacttcg cccgcgcccg gttgttgcgc ggaccgtgct cgagctcgac cagcccaagc
     3301 gcctcggcca ccggggtcac gtagttcgca aagcgtccac gcagtccctt cttgagcccg
     3361 taccagccct tctttgggtt gtcgggagac cgagcccagg cctcgatgga gccgtccttg
     3421 gccggctttt gctcgtcggc attgcccagc tccatccagt cgccatgcgc cttcagcatc
     3481 gccgcgagat cctccggtgc gctgatgtgg tagcgcagct cggtcccgcc cgcgaggcac
     3541 accagcgccg gcggattcgc cgccgggtcg cgccagagca tgatctccga ggtgcccggc
     3601 ggagtcttga gctgccacgg gtcgtccttg gtgcctttgg ccatcagttg tcctcctcga
     3661 ctgtgaattg tcgcaaagcc ggcagcacgc gctcccagcc ctcggcgaac cgggcgacgc
     3721 gctgtggcca gatcgacttg gcttctgccg tcagggcgcg gtgcacgacg gtaatctcgg
     3781 tccccgtcgg cgtcgccgcg aagctgatct cgaccgccgt cggcgcggcc ggcgagcccg
     3841 ggaaccaatc gaggcttagg aaccgtggcg gatcagcgcg gcgcacctcg gccatcgtcc
     3901 gctcgctgcc gtcggcggcg cgctcgatca gccgcccgcc ggtcaccgga tcgaaatgca
     3961 gcgacgcctc gcgcgtgcgc cggtggccgc gcggccacca gaggtcgacc atccgggtga
     4021 agacatcgaa tgcatgctcg acgctgcatt ggagcgcaat cgtgcgggtc agcgtatcat
     4081 ccacgatcgg gacgccccgc cggggacgtg ttttccgcga ccatccggag ccgcgcttcg
     4141 gcttcgtccc aaaagcgggt gagccagcca gcggtctccg tcagcccggt tgcatcgagc
     4201 cgatagatgt tgcgcgtccc ttcggagcga tg
//
LOCUS       DATAZA010000408         3067 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_749419, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000408 DATAZA010000000
VERSION     DATAZA010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3067
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_749419"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..159
                     /locus_tag="VHZ56_10345"
                     /pseudo
     CDS             1..159
                     /locus_tag="VHZ56_10345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611419.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            complement(385..1194)
                     /gene="istB"
                     /locus_tag="VHZ56_10350"
     CDS             complement(385..1194)
                     /gene="istB"
                     /locus_tag="VHZ56_10350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011544395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HEX4298410.1"
                     /translation="MLNHPTIDQLRSLRLDGMAEAFVELQSQDAARDLAPAEWLALLL
                     DREAAHRGTQRFKSRLRNAKLRHGQASIEDVDYRAARRLDKALFQQLAAGRWIAEHRN
                     LLITGPCGVGKSWLSCALAQRACRDGYTVHYARVPRLFTDLELAHGDGRFARLFRTLT
                     KADLLILDDWGPDRLSANQRRDLMEIVEDRYGAGSTLITSQLPVDAWHEVIGDPTFAD
                     AILDRLVHNAHRLALDGPSMRDPKTAKSDTTAPGPSAADTTVTKPPTGAKK"
     gene            complement(1208..2722)
                     /gene="istA"
                     /locus_tag="VHZ56_10355"
     CDS             complement(1208..2722)
                     /gene="istA"
                     /locus_tag="VHZ56_10355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004666649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEX4298411.1"
                     /translation="MRKIRDVLRLSAAGLSKRQIAASLGIGPTAAGACLRRAREAGIG
                     WPLPDDLDDAALERRLYPFPTTTAKDWRLLPDWPAIHRELRRKGVTLQLVWEEYRAAH
                     PDGYGRSWFCELYRAWEGRLSPTMRQAHVAGEKLFVDYAGTTIDIVDAATGEVHACQL
                     FVAALGASSFTYAEATFTQTLPDWIGSHTRAFGFYGGVPAMVVSDNLKSGVTKACFYE
                     PGVNRAYAEMAVHYDTAIVPARPRKPPDKAKVEVAVQVATRWIIAKLRNIRFFSLVEL
                     NAAIRDCVTALNDRVSRHLGASRRALFEALDQPALKPLPTEPYVYAEWKQCKAGLDYH
                     VEVAKHYYSVPHTLLREELWARITARTVELFHRGNRVAVHVRSSSNRKHTTVREHMPS
                     SHRRYADWTPERIQGRANEIGPKTSALIEIILREKTHPEQGFRATIGILRHANSFGHE
                     RLEAACGRALEIGARSYTSVTSILKTNLDRRRPASATDGPAIVHANIRGPRYFH"
     gene            complement(2905..3053)
                     /locus_tag="VHZ56_10360"
                     /pseudo
     CDS             complement(2905..3053)
                     /locus_tag="VHZ56_10360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611079.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          552 a          977 c          981 g          557 t
ORIGIN      
        1 cacgattaca agcggcatgg caccacaaca ttgtttgcgg cgctcgaagt cgccaccgga
       61 aagatcatcg cgacccattc aaagcggcgg cgccgcgtcg agtttctcga tttcatgaac
      121 agcgtcaccg cggcttttcc gaaccgcaag cttcacgttg cgcataccgg ggaaggcgac
      181 cacgctatcc ggcgcatgga gaccacgtga tccagtcgat gacgaccggg gcggcgcgag
      241 agcttgatgg cgccgttgga tttattttct gatctcagta tttgaggttc gggtcaagcg
      301 ataggtagag cccgtgcgcg gcgcgaagtg accgccacga gtcaaacgca gcgccgcgca
      361 tgggcgggcc ggagggcgcg ttgttcattt cttcgctcct gtcggcggtt tcgtgaccgt
      421 cgtatctgcc gcgctcggcc ccggcgctgt ggtatccgac ttggccgtct tgggatcgcg
      481 catcgatggc ccatcgagcg caagacgatg ggcgttatgc acgaggcggt cgaggatagc
      541 gtcggcgaag gtcggatcgc cgatgacctc gtgccaggca tcgaccggca actggctggt
      601 gatcagcgtc gaaccggcgc cataacggtc ctcgacgatc tccatgagat cgcgccgctg
      661 gttggccgag agccggtctg ggccccagtc atcgaggatc agcagatcgg ctttggtaag
      721 cgtgcggaac agacgcgcga agcggccgtc tccgtgggcc agttcgagat cggtaaagag
      781 gcgcggcaca cgtgcgtaat gcaccgtata gccatcacgg caggctctct gcgccagcgc
      841 gcagctgagc caagacttgc cgacaccgca cggtccggtg atcagcaggt tgcgatgttc
      901 ggcaatccag cggccggcgg ccagttgctg gaacagcgcc ttgtcgagcc gtcgagcggc
      961 acgatagtcg acgtcctcga tcgacgcctg gccgtggcgc agcttcgcat tgcgcagccg
     1021 gctcttaaac cgctgcgtgc cgcgatgcgc cgcctcgcga tcgagcagca gcgccagcca
     1081 ttcggcaggc gcgagatccc gggcagcgtc ctgcgactgc agttcaacaa aggcctcggc
     1141 catgccatcg agcctcaggg atcgcagctg gtcgatggtt ggatggttca gcattgcgtg
     1201 tttctcctca gtggaagtag cgggggccac ggatgttcgc gtgcacgatc gccggcccgt
     1261 ccgtggcgga ggcaggccgt cggcgatcga ggttggtctt caggatggag gtaaccgagg
     1321 tgtaggagcg cgcgccaatc tcgagcgcgc ggccgcaggc ggcttccagt cgctcatgcc
     1381 cgaagctgtt ggcgtgcctg aggatgccga tcgtggcgcg gaagccctgc tccggatgag
     1441 tcttctcgcg caggatgatc tcgatcagcg ccgatgtctt cggcccgatt tcgttcgctc
     1501 ggccctggat gcgttccggc gtccagtcgg catagcgccg gtggctcgac ggcatgtgct
     1561 cgcgcacggt cgtatgcttg cggttcgatg acgaacgcac gtggacagcg acgcgattgc
     1621 cacgatggaa cagctccacc gtgcgtgccg tgatccgcgc ccacagctcc tcgcgcagca
     1681 acgtgtgcgg caccgagtag taatgcttcg cgacctcgac gtgataatcg aggccggcct
     1741 tgcactgctt ccactcggcg tagacatagg gctcagtcgg taatggcttc aatgctggct
     1801 ggtccagcgc ctcaaacagt gcgcggcggc tcgcgcccag atgccgggag acgcggtcgt
     1861 tcagcgctgt gacacaatca cggatcgctg cgttcaactc gacgagcgag aagaacctga
     1921 tgttgcgaag cttggcaata atccagcgcg tcgcgacctg cacggcaacc tcgaccttcg
     1981 ccttgtcggg cggttttctc ggccgtgctg gcacaatggc cgtgtcgtag tgcaccgcca
     2041 tttcagcata ggcacgattg acgcctggct cgtagaagca ggccttggtg acgccggact
     2101 tcagattgtc ggaaacgacc atcgccggca caccgccgta aaagccaaag gcgcgtgtgt
     2161 gcgagccgat ccagtcgggc agcgtctgcg tgaaggttgc ttcggcgtac gtaaaactcg
     2221 atgcgccgag tgcagcgaca aacagctggc aggcatgcac ctctccggtc gcggcatcga
     2281 cgatgtcgat cgtcgtaccg gcgtaatcga cgaacagctt ctcgccggcc acatgggcct
     2341 gccgcatcgt cggcgacaac cggccttccc aggcccgata gagttcgcag aaccagctgc
     2401 ggccgtaacc gtcgggatgc gcggcacgat attcctccca gaccagttgc agcgtcacgc
     2461 ccttgcgacg caactcccgg tggatcgccg gccagtccgg cagcaaccgc caatccttgg
     2521 ccgtagtcgt cgggaacgga tagaggcgtc tctccagtgc agcgtcgtca agatcgtccg
     2581 gcagcggcca accgatcccg gcttcgcgcg cccggcgcag gcacgctccg gcggcggtcg
     2641 ggccaatccc cagacttgcg gcaatctggc gcttggacag gccggcggcc gacagccgca
     2701 ggacgtcgcg gatcttgcgc atgggtaatc tctgttgggc catccccact cctttcgaaa
     2761 aaggagcgaa gtccggctga ttcgcggatc acccaacggc gttcatcacg cccatccaca
     2821 gccctgttgc cctggtcgcc atcgaccgga acaggtggtc gtcatccacc ggaaacggtg
     2881 gtcgccttca accggaaacc ccggtcgcca tggaccggcg cgcgcacaat ccacagcacc
     2941 gcttcaagaa acctacggtt atcgcttccg ctgcggccgg gatcggtggg cttacccaaa
     3001 caaagcggct ccatcttcgc ccactgggcg tccgtcaaaa cgaatcggtg catgccaaac
     3061 tcctttc
//
LOCUS       DATAZA010000409         1903 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3767422, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000409 DATAZA010000000
VERSION     DATAZA010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1903
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3767422"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..597)
                     /locus_tag="VHZ56_10365"
     CDS             complement(<1..597)
                     /locus_tag="VHZ56_10365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX4298412.1"
                     /translation="MSDNQVFPPSPAAKARTWTTKAQYEEMYARSVRDPDGFWREQSQ
                     RLDWITAPTRIKNTSFAYPDISIKWFEDGVLNVTTNCLDRHLASRGDQVAIIWEGDTP
                     GTDDKVTYRQLHERVCRFANVLKAHGVKKGDRVTIYMPMVPDTAVAMLACARIGAVHS
                     VIFGGFSPDSIAGRINDCDSKIVLTADEGRRGGKTIPLK"
     gene            759..1379
                     /locus_tag="VHZ56_10370"
     CDS             759..1379
                     /locus_tag="VHZ56_10370"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEX4298413.1"
                     /translation="MSDATLTSAAPELSQAKATPRFSTRAATADDLDLIHRELVAVIE
                     ESPHYNAEFKAWEKSRLTKSYLRMLQRQDPWHVMCLLSEGRVGGALVSGPEYGAIFRY
                     WSWIFPPFRQTRLGMHGMRAFDEHFDNGKFHKAYTFVRPENEVALALLRRYGYVETTI
                     LRQHIFGQDYCVMEKPYTKLTEGYDTGVGEGRVGRLIGRVNALLGR"
     gene            complement(1396..>1903)
                     /locus_tag="VHZ56_10375"
     CDS             complement(1396..>1903)
                     /locus_tag="VHZ56_10375"
                     /inference="COORDINATES: protein motif:HMM:NF026018.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide biosynthesis C-terminal
                     domain-containing protein"
                     /protein_id="HEX4298414.1"
                     /translation="GAVYAVTMPDMFESEALKDRAGFHRKIGEANLVATGLSVALLVV
                     VLALSPFAFMLFGSAFQAGVFPLAILCLGLVVRSVFGPASVMLSVHNRPYASLPAVAA
                     SMAALVVANLALVPHFGLMGAAVAALIGMTVWAAALWFTALRIAGVDVSIRARLTRTP
                     ELAVKAAE"
BASE COUNT          323 a          709 c          568 g          303 t
ORIGIN      
        1 tttgagcgga atggtcttgc caccgcgccg tccctcgtcg gccgtcagca cgatcttgct
       61 gtcgcagtcg ttgatccggc cggcaatcga gtcgggcgag aagcccccga agattaccga
      121 atgcaccgcc ccgatccgcg cacaggccag catcgcgacg gccgtgtctg gcaccatcgg
      181 catgtagatg gtcacccggt cgcccttctt cactccgtgc gccttgagca cgttggcgaa
      241 ccggcacacc cgctcgtgca actggcgata ggtcaccttg tcgtcggtgc cgggcgtgtc
      301 gccctcccag atgatcgcta cctggtcgcc ccggctcgcc aaatgtcggt cgaggcagtt
      361 ggtggtgacg ttgagcaccc cgtcctcgaa ccatttgatc gagatgtccg gataggcaaa
      421 gctggtgttc ttgatccggg tcggcgccgt gatccagtcg agccgctggc tctgctcgcg
      481 ccagaacccg tcggggtcgc ggaccgagcg cgcgtacatc tcctcgtact gcgctttggt
      541 cgtccaggtc cgcgccttgg ccgccgggct cggcggaaac acctgattgt cgctcatcgg
      601 ctcctcccag aactcgctgc aacccgttct agccacccgg tttccgggcg gcaaggagac
      661 cacttgtctc gcgcccgtta actgcgcgga tcgacggcgc tacggtcgcg ccggcggcag
      721 gcgtattctt gcggcaccct ctgatgcgag cttgaccgat gtctgacgcc acgctgactt
      781 ctgcggctcc cgagctatct caggccaagg cgacgccgcg cttttcgacc cgggcggcca
      841 ccgccgacga cctcgacctc atccatcgcg agctggtcgc ggtgatcgag gagagcccgc
      901 attacaacgc cgagttcaag gcctgggaga aatcccgcct gaccaaatcc tatctgcgca
      961 tgctgcagcg ccaggatccc tggcacgtga tgtgcctcct ctccgaaggc cgcgtcggcg
     1021 gcgccctcgt ctcgggcccc gagtacggcg ctatcttccg ctactggagc tggatcttcc
     1081 cgccgttccg gcagacgcgg ctgggcatgc acggcatgcg cgccttcgac gagcacttcg
     1141 acaacggcaa gttccacaag gcctacacct tcgtccgccc ggagaacgaa gtcgccctcg
     1201 ccctcctccg ccgctacggc tacgtcgaga cgaccatcct ccgccagcac atcttcggcc
     1261 aggactactg cgtgatggaa aagccctaca ccaagctcac cgagggctac gacaccggcg
     1321 tcggcgaagg gcgcgtcggc cgcctcatcg gccgggtcaa cgcgctgctc ggccgctagc
     1381 ctcgagccgc cgccgctact cggcggcctt gaccgcaagc tccggtgtcc gcgtcagccg
     1441 cgcccggatc gacacgtcga cgccggcgat ccgcagcgcc gtgaaccaca gcgccgccgc
     1501 ccacaccgtc atgccgatca gcgccgcgac cgccgcgccc atcagcccga aatgcggcac
     1561 cagcgccagg ttggcgacaa ccagcgccgc catcgacgcc gcgacggccg gcaggctggc
     1621 atacggccgg ttgtgcaccg acagcatcac cgaagccggc ccgaacaccg accgcaccac
     1681 cagcccgagg caaaggatgg ccagcgggaa caccccggcc tggaacgccg aaccgaacag
     1741 catgaacgca aacggcgaca gtgccagcac caccaccagc agcgccacgg aaagtcccgt
     1801 cgccaccaaa ttcgcctcgc cgatcttgcg gtggaacccg gcgcgatcct tcagcgcctc
     1861 gctctcgaac atgtcgggca tggtgaccgc atagaccgcg ccg
//
LOCUS       DATAZA010000410         1826 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2491722, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000410 DATAZA010000000
VERSION     DATAZA010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1826
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2491722"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1114
                     /locus_tag="VHZ56_10380"
     CDS             <1..1114
                     /locus_tag="VHZ56_10380"
                     /EC_number="5.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012651866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AGE family epimerase/isomerase"
                     /protein_id="HEX4298415.1"
                     /translation="LDPLGKPLNAANPVRGIHGTARMVHCFAIGSLLGRPGSDPIVDH
                     GMQYLWNVHRDAQRGGYFWAVDDNGAADNGRKQGYGHAFVLLAASSAKLVGHPLADRM
                     IADVTEAIDTRFWEDKHGAIAEEFHADWSVISPYHGQNSNMHLTEALMAAFEATGERE
                     YLRKAERIADLIINRRARENGFRVAEHFGPDWSVDKAYAGDQMFRPPGTTPGHWLEWA
                     RLVLQLWALGGKAHAWMPEASAALFRQAVSIGWDNTHGGFFYNLGWNDVPDMRDKLWW
                     PACEGVGAAAFLIAHRPDAFHESWYRRIWDVIACHHLDHENGGWFEQLGEDMRPAHTL
                     FAGKADIYHALQACLIPLYPAEGSVTRGIIASEGGK"
     gene            complement(1131..>1826)
                     /locus_tag="VHZ56_10385"
     CDS             complement(1131..>1826)
                     /locus_tag="VHZ56_10385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013338293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX4298416.1"
                     /translation="SAARIRKALEGSLRRLGTEYIDLYYQHRVDPRTPMEDVAGTVQA
                     LIAEGKVRHFGLSEAGAASIRRAHAVQPVTALQSEYSLFWREPEAEIIPTLEELGIGF
                     VPFSPLGKGFLTGTISADTQFVGSDFRNTIPRFSGDNRTANQVLVDALGEIAAEKHAT
                     KGQVALAWLLAQKPWIVPIPGTTKLERLTENNGAAAVTLTVSDLARIGAAVAGIEVKG
                     DRYPPALMAMVGL"
BASE COUNT          282 a          629 c          621 g          294 t
ORIGIN      
        1 tctcgatccg ctgggcaagc cgctcaatgc cgccaatccg gtgcgcggca tccacggcac
       61 ggcgcgcatg gtgcactgtt ttgccatcgg cagcctgctg gggcggccgg ggtccgaccc
      121 gatcgtcgac cacggcatgc aatatctatg gaatgtccat cgcgacgcgc aacgcggcgg
      181 ctatttctgg gcggtcgacg acaatggcgc cgccgacaac ggccgcaagc agggctatgg
      241 ccacgccttc gtgctgctgg cggcgtcgag cgccaagctg gtcggccatc cgctggccga
      301 ccggatgatc gccgacgtca ccgaggcgat cgacacccgc ttctgggagg acaagcacgg
      361 cgccatcgcc gaggagttcc acgccgactg gagcgtcatc agcccctatc acgggcagaa
      421 ctccaacatg cacctgaccg aggcgctgat ggcggcgttc gaggccaccg gcgagcggga
      481 gtacctccgc aaggccgagc gcatcgccga cctcatcatc aaccgccggg cgcgcgagaa
      541 cggctttcgc gtcgccgagc atttcggtcc cgactggagc gtcgacaagg cctatgccgg
      601 cgaccagatg ttccgcccgc cgggcacgac gccgggccac tggctcgaat gggcgcggct
      661 ggtgctgcag ctgtgggcgc tcggcggcaa ggcgcatgcc tggatgccgg aggcgtcggc
      721 ggcgctgttc cggcaggcgg tcagcattgg ctgggataat acgcacggcg gcttcttcta
      781 caatctgggc tggaacgacg ttcccgacat gcgcgacaag ctgtggtggc cggcctgcga
      841 aggggtcggc gccgcggcct tcctcatcgc ccaccggccg gatgcgttcc acgagagctg
      901 gtatcgccgg atctgggacg tcatcgcgtg ccaccacctc gaccacgaga acggcggctg
      961 gttcgagcag ctgggcgagg acatgcgtcc cgcccacacg ctgttcgccg gcaaggccga
     1021 tatctaccac gcgctgcagg cctgcctgat cccgctgtac ccggccgaag gcagcgtgac
     1081 gcgcgggatt atcgcgagcg agggtggaaa gtagccgccc gccggccttc ctacaggccg
     1141 accatggcca tcagcgccgg cgggtagcgg tcgcccttga cctcgatgcc ggcgactgcc
     1201 gccccgatgc gggccaggtc cgagacggtg agcgtcacgg ccgcggcgcc gttgttctcg
     1261 gtcagccgct caagcttcgt cgttcccggt atcggcacga tccacggttt ttgcgccagc
     1321 agccaggcga gggcgacctg acctttggtc gcgtgttttt ccgccgcgat ctcgcccagg
     1381 gcatcgacca gcacctggtt ggcggtccgg ttgtcgccgc tgaaccgtgg aatggtgttc
     1441 cggaaatccg agccgacgaa ctgcgtgtcc gcactgatcg tgcctgtcag gaagcccttg
     1501 ccgagggggc tgaacggcac gaagccgatc cccagctcct cgagcgtcgg gatgatctcg
     1561 gcctcgggct cgcgccagaa cagcgaatac tcgctctgca gcgccgttac cggctgcacc
     1621 gcgtgggcgc ggcggatcga cgccgcgccg gcctccgaca gcccgaagtg gcgcaccttg
     1681 ccttcggcga tcagcgcctg cacggtgccg gcgacgtctt ccatcggcgt cctggggtcg
     1741 acccggtgct ggtagtagag gtcgatgtac tcggtcccca atcgccgcag cgagccctcc
     1801 agggctttgc ggatgcgcgc cgccga
//
LOCUS       DATAZA010000411         2190 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_517028, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000411 DATAZA010000000
VERSION     DATAZA010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2190
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_517028"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..400
                     /locus_tag="VHZ56_10390"
     CDS             <1..400
                     /locus_tag="VHZ56_10390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015857413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="selenoprotein O"
                     /protein_id="HEX4298417.1"
                     /translation="AEDAELVTKIFAFLHDSQIGYEQFWFDWRGGMASVARAPASPAA
                     AAYETDAFGPVRDALGAYETAPAANLHHPYFERPAPRTMLIDEMEALWAPIAERDDWS
                     AFDAVLAEIESMRDAYAGDRKSAIRPGTSS"
     gene            complement(352..>2190)
                     /locus_tag="VHZ56_10395"
     CDS             complement(352..>2190)
                     /locus_tag="VHZ56_10395"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF017076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX4298418.1"
                     /translation="ATLNDRLAELGAAAIGYDVLFPEADRLSADNDAAFAKSLGHTNS
                     VLGFSLSPGAPPLSEVPKASIAISGSDPKASLPPIPGAVAPLPLLNDAAAGLGSLSLD
                     SGTATGVVRQVPLLWSDGTNIYPGLSIETLRLALGASTLVALGDTAGGHTLESLRIGD
                     FTVPTTADGNLVVYDRPFDMSRVISAAAVLGDGYASLKDAVSGRIILIGTSASGLLDL
                     HATPLSPSIAGVLIHAGVIDQIISGQYLVRADWLKAAEILAFVATGLLLVFVVLRVGP
                     VAGLAVAVAAILAMAGVAWTAFAVKGWQIDATFPAAALLVTYGAMVYFQFSLTERDRR
                     AVRRAFGYYVAPQLLAEIERKAGRLELGGELKEISVMFADMRGFTSFTEKHTPQDTLN
                     TLNTLFGALGKEIVDRYGTIDKFIGDAIMAFWNAPVDVPEHPRKAALAAIAMRTSLRA
                     LNVDKVFGDPGIAVGIGIATGVALVGNMGLETRFDYSTIGDPVNVASRVEGESKVVGY
                     DIVAAEPTAVASPELAWLEAGSVQLKGKAARLKVFILVGDEPLAKTAGFVELAAAHRG
                     LLAALRGGEGGEALALCKQLGAAVDPQLARFYELVPGRIADFLSPA"
BASE COUNT          350 a          813 c          720 g          307 t
ORIGIN      
        1 ggcggaagac gccgagctgg tgacgaaaat cttcgcgttc ctccacgaca gccagatcgg
       61 ctacgagcag ttctggttcg actggcgcgg cggcatggcg agtgtcgcgc gggcccccgc
      121 cagccccgcc gccgcggcgt acgaaaccga cgccttcggg cccgtgcgcg acgccctggg
      181 cgcctacgag acggcgcccg cggccaacct ccatcatccg tatttcgagc gcccggcgcc
      241 ccgcaccatg ctcatcgacg agatggaggc cctgtgggcg cccatcgccg agcgcgacga
      301 ctggtcggcc ttcgacgccg tcctcgccga gatcgagtcg atgcgcgacg cctatgccgg
      361 cgacaggaag tcggcgatcc gccccggcac cagctcgtag aaccgcgcca gctgcgggtc
      421 gaccgccgcg cccagctgct tgcacagcgc cagcgcttcg ccgccctcgc cgccgcgcaa
      481 cgccgccagc agcccgcgat gcgccgccgc cagctcgaca aagcccgcgg tcttcgccag
      541 cggctcgtcg cccacgagga tgaacacctt gagccgcgcc gccttgccct tgagctgcac
      601 cgagccggcc tcgagccagg cgagctcggg cgaggcaact gccgtcggct cggccgccac
      661 gatgtcgtag ccgaccacct tgctttcacc ctcgacccgc gacgcgacat tcaccggatc
      721 gccgatggtc gaatagtcga agcgcgtctc gagccccatg ttgcccacca gcgccacgcc
      781 ggtcgcgatg ccgatgccga ccgcgatgcc ggggtcgccg aacaccttgt cgacattgag
      841 cgcgcgcagc gaagtccgca tcgcgatcgc cgccagcgcc gccttgcgcg gatgctcggg
      901 cacgtcgacc ggcgcattcc agaacgccat gatcgcgtcg ccgatgaact tgtcgatggt
      961 gccgtagcgg tcgacgattt ccttgcccag cgccccgaac agcgtgttga gcgtattgag
     1021 cgtgtcctgc ggcgtgtgct tttcggtgaa gctggtgaag ccgcgcatgt cggcgaacat
     1081 caccgagatt tccttgagct cgccgccgag ctcgagccgg ccggccttgc gctcgatctc
     1141 ggcgagcagc tgcggtgcca cataatagcc gaaggcccgc cgcaccgccc ggcgatcccg
     1201 ctcggtcagc gagaactgga aatagaccat cgctccatag gtgacgagca gcgccgccgc
     1261 cgggaaggtc gcgtcgatct gccagccttt gacggcgaac gccgtccatg cgactccagc
     1321 catcgcgagg atggccgcca ccgcgaccgc gaggccggcc accggcccga cccgcagcac
     1381 gacgaacacc agcagcaggc cggtcgcgac gaacgccagg atttcggccg ccttgagcca
     1441 gtcggcccgc accaggtact gccccgagat gatctggtcg atgaccccgg catggatcag
     1501 cacgcccgcg atgctcggcg acagcggcgt cgcgtggagg tcgagcagcc cgctcgccga
     1561 ggtgccgatc aggatgatgc ggcccgacac cgcatccttc agcgaggcgt agccatcgcc
     1621 cagcaccgcc gcggccgaaa tcacccggct catgtcgaac ggccggtcat agaccacgag
     1681 gttgccgtcc gccgtcgtcg gcacggtgaa atcgccgatc cgcaggctct cgagggtgtg
     1741 gccgccggcg gtgtcgccca gcgccaccag cgtcgaggcg ccgagcgcca gccgcagcgt
     1801 ctcgatcgac aggcccggat agatgttggt gccgtcgctc cacagcagcg gcacctgccg
     1861 gaccaccccc gtcgccgtgc cgctgtcgag gctgagactg cccagccccg ccgccgcgtc
     1921 gttgagcagc ggcagcggcg ccaccgcgcc ggggatgggt ggcagcgacg ccttgggatc
     1981 gctgccggag atcgcaatgc tcgccttggg cacttcgctc agcggcggcg cgcccggcga
     2041 aagcgagaac ccaagcaccg aattggtgtg gccgagcgat ttggcgaacg ctgcgtcatt
     2101 gtcggccgag agccggtccg cctccgggaa cagcacgtcg tagccgattg ccgcggcacc
     2161 gagctcggcc agccggtcgt tgagcgttgc
//
LOCUS       DATAZA010000412         3647 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3651235, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000412 DATAZA010000000
VERSION     DATAZA010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3647
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3651235"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1449
                     /locus_tag="VHZ56_10400"
     CDS             <1..1449
                     /locus_tag="VHZ56_10400"
                     /EC_number="1.5.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004174 -
                     electron-transferring-flavoprotein dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HEX4298419.1"
                     /translation="DWRQKGAPVGPAVAADHLHLLTRRGDLRIPNWLLPPLMRTPHGV
                     IVSLGDLVRWLGDEAQALGVDIFPMTAAVDVLKGEGGAVAGIVTGDLGVDRHGNPKPG
                     YAAGIGIRAKYMLVAEGARGSLARQLIARFRLDAKSSPQKFGLGIKEIWEIPHSLHEP
                     GRVDHYLGFPLDDATSGGGFCYHAQDRRIYLGLVVHLDYRNPTLSPFDEFQRFKAHPS
                     IARLLSGATRLSYGARTLTSGGWQSIPELVFPGGALIGCAAGFMNAPRLKAIHSAIRS
                     GIGAADAIADALASGRANDVVSDLPARVMATGIGRELRRVRNVKPLWSRFGTVLGVTL
                     SGLDMWVTTLLGLSPFGTLRHRKPDSAALWPKSALPAKIYPRPDGRLSFDRAASVFLA
                     NIAHDEDQPVHLRLADPAVPIRDNLPVYGEPAPLYCPAGVYELVETATGPAFRINAGN
                     CVHCKTCDIKDPARNILWVPPEGGSGPNYAGM"
     gene            1616..3346
                     /locus_tag="VHZ56_10405"
     CDS             1616..3346
                     /locus_tag="VHZ56_10405"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4298420.1"
                     /translation="MNTLLRLAAAPALLLLAIAAPALADGPGATGAYLSGLEASDSMS
                     THEAAQFFGDAAADEWDNPIVLNEAFIAFVSDGRIGDALNVAHHLSDLQPDNDMVKLV
                     VATVALKERRYDDAVTELDKIGSNSFEGVTGAVLKAWAITGQGRLDDAFKSLDTVGDN
                     GLAEFLIFHRAIMAEVAGRTDDAVKYISQAHDGDPYTADVVEAYASILANAGQPDKAV
                     DAVVGFESQGLNFPGVTAIKQALVDKQRPPLYADSVQAGAAEMFHSIGVAITRDGTEQ
                     DALVMFRLANYLDPRNDAITLVLGQLYDDAGQHEIADDLYNGVAATSPYKPMATVRVA
                     DNLDATGDRAEAIRRLGNIVTTNPNDIDAVSVLGDLYRSDKQYQAAVGEYTRALAITG
                     GQSPGDWRFYYVRGIAYERSEQFPSAEKDFLKALDLNPNQPQVLNYLGYSWVDKGMNL
                     NRALGMIQKAVAASPNDGYIIDSLGWAYYRLGRFADAVTELEQAATLMPNDPEINDHL
                     GDAYWQVGRKLEAHFQWNVAYSLDKDGDVKARVAPKLTGGLDAAPKDGESAPILDTPP
                     GDQAQAVPAN"
     gene            3343..>3647
                     /locus_tag="VHZ56_10410"
     CDS             3343..>3647
                     /locus_tag="VHZ56_10410"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019169855.1"
                     /note="An essential enzyme in the nonmevalonate pathway of
                     isopentenyl diphosphate and dimethylallyl diphosphate
                     biosynthesis; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEX4298421.1"
                     /translation="MSPARAPEPAREAAPAKINLALHVTGRRPDGYHALEMLVAFADI
                     GDELEAIPAPRDSLTASGPFAAALGNAEGNLVLRALAAFRIRWPDRLPAGLAIRLAK"
BASE COUNT          581 a         1440 c         1082 g          544 t
ORIGIN      
        1 gactggcggc agaaaggcgc ccccgtcggc cctgccgtcg ccgccgacca cctgcacttg
       61 ctgacccgcc gcggcgacct gcgcatcccc aactggctgc tgccgccgct gatgcggacc
      121 ccgcacggcg tcatcgtcag cctcggcgat ctcgtccgct ggctcggcga cgaggcgcag
      181 gcgctcggcg tcgacatctt cccaatgacc gccgcggtcg acgtgctcaa gggggagggc
      241 ggcgccgtcg ccggcatcgt caccggcgac ctcggcgtcg atcgccatgg caaccccaag
      301 ccgggctacg ccgccggcat cggcatccgc gcgaaatata tgctggtcgc ggagggggca
      361 cgcggctcgc tcgcccggca gctgatcgcc cgcttccggc tcgacgcgaa atccagtccg
      421 cagaaattcg gactcgggat caaggagatc tgggaaatcc cccactccct gcatgagccg
      481 ggccgcgtcg atcactacct cggctttccg ctcgacgacg ccacctccgg cggcggcttc
      541 tgctaccacg cgcaggaccg ccggatttac ctcggcctcg tcgtccacct cgactaccgc
      601 aatcccacgc tgtcgccctt cgacgagttc cagcgtttca aggcgcatcc ctcgatcgcc
      661 cggctgctgt ctggcgccac ccgcctgtcc tatggcgccc ggacgctgac ctccggcggc
      721 tggcagtcga tccccgaact ggtgtttccg ggcggcgccc tcatcggctg tgccgccggt
      781 ttcatgaacg cgccgcgcct caaggccatc cacagcgcca tccgctcggg catcggggcc
      841 gccgacgcca tcgccgatgc gctcgcgtcg ggccgggcca acgacgtggt gtccgatttg
      901 ccggcccgcg tgatggccac cggcattggc cgcgagctcc gccgcgtccg caacgtcaag
      961 ccgctctggt cgcgcttcgg caccgtgctc ggcgtaacgc tttccggcct cgacatgtgg
     1021 gtgacgacgc tgctgggcct ttcgccgttc ggcacgctcc gccaccgcaa gcccgattcc
     1081 gccgccctgt ggcccaaatc cgcgctgccg gcaaagatct atccgcgacc tgacggccgc
     1141 ctgtccttcg accgtgcggc ctcggtgttc ctcgccaaca tcgcccacga cgaggaccag
     1201 ccggtgcatc tgcgcctcgc cgacccggcc gtgcccattc gcgacaacct gccggtctat
     1261 ggcgagccgg ccccgcttta ttgtccggcc ggcgtctacg aactcgtcga aaccgccacc
     1321 ggcccggcct tccgcatcaa cgccggcaat tgcgtccact gcaaaacctg cgacatcaag
     1381 gatcccgccc gcaacatcct ttgggtcccc ccggagggcg gctccggccc caactacgcc
     1441 gggatgtagg cggcccgttc gccgccgccc aacgccaacg tgaatggcca agcttgcggc
     1501 gcagtcctaa aatggccaat gtttccgtgc tggtcgccgg ccacggacgg gaaggggcga
     1561 gtgtctcccg ccgcacacat gtgaacagca tccgcctccg gagatcgtac cacccgtgaa
     1621 cacccttctg cgcctcgctg ctgcccccgc gctgctgctc ctcgccatcg ctgcgcccgc
     1681 cttggccgat ggccccggtg ccaccggcgc ctatctctcg gggctcgagg cgagcgacag
     1741 catgagcacc cacgaggcgg cgcaattctt cggcgacgct gcggcggacg agtgggacaa
     1801 ccccatcgtc ctcaacgagg ccttcatcgc tttcgtctcc gacggacgca tcggcgatgc
     1861 gctcaacgtc gcgcaccatc tctccgacct gcagcccgac aacgacatgg tcaagcttgt
     1921 cgtcgccacc gtggcgctca aggagcgccg ctacgacgac gccgtcaccg aactcgacaa
     1981 gatcggctcg aacagcttcg agggcgtcac cggcgccgtg ctcaaggcct gggcgatcac
     2041 cggccagggc cgcctcgacg acgccttcaa gtcgctcgac accgtcggcg acaacggcct
     2101 cgccgagttc ctcattttcc accgcgccat catggccgag gtcgccggcc gcaccgacga
     2161 tgccgtcaag tacatcagcc aggcgcatga cggcgacccc tacaccgccg acgtcgtcga
     2221 ggcctatgcc agcatcctcg ccaatgcggg ccagcccgac aaggcggtcg acgccgtggt
     2281 cggcttcgaa tcgcagggcc tcaacttccc gggcgtcacc gcgatcaagc aggccctcgt
     2341 cgacaagcag cggccgccgc tctacgccga cagcgtccag gccggcgccg ccgagatgtt
     2401 ccactcgatc ggcgtcgcca tcacccgcga cggcaccgag caggacgcgc tggtgatgtt
     2461 ccggctcgcc aactacctcg atccgcgcaa cgacgcgatc acgctggtcc tcggccagct
     2521 ctacgacgac gccggccagc acgagatcgc cgacgacctc tacaacggcg tcgccgcgac
     2581 ctcgccatac aagccgatgg cgaccgtccg tgtcgccgac aacctcgacg ccaccggcga
     2641 ccgcgccgaa gccatccgcc gcctcggcaa catcgtcacc accaatccca atgacatcga
     2701 cgccgtctcg gtgctcggcg acctctaccg ctccgacaag cagtaccagg cggcggtcgg
     2761 cgaatacacc agggccctcg ccatcaccgg cggccagagc cccggcgact ggcgcttcta
     2821 ctacgtgcgc ggcatcgcct atgagcgttc cgagcagttc ccctcggccg aaaaggattt
     2881 cctcaaggcc ctcgacctca accccaacca gccgcaggtg ctcaactacc tgggctacag
     2941 ctgggtcgac aagggcatga acctcaaccg cgccctgggc atgatccaga aggcggtcgc
     3001 cgcctcgccc aatgacggct acatcatcga cagcctcggc tgggcctact accgcctcgg
     3061 ccgctttgcc gacgccgtca ccgagctcga gcaggccgcc accctcatgc ccaacgatcc
     3121 cgagatcaac gatcatctcg gcgacgccta ctggcaggtc ggtcgcaagc tcgaggcgca
     3181 cttccagtgg aacgtcgcct attcgctcga caaggatggc gacgtgaagg cccgcgtcgc
     3241 gcccaagctg accggcggcc tcgacgccgc gcccaaggac ggcgagtcgg cgcccatcct
     3301 cgacaccccg ccgggcgacc aggcgcaggc ggtgccggcc aactgagccc agcgcgcgcc
     3361 ccggagccgg cccgcgaggc cgctcccgcc aagatcaatc tggcgctgca cgtcaccggc
     3421 cgccggccgg acggctacca tgcgctcgag atgcttgtgg ccttcgccga catcggcgac
     3481 gagctcgaag ccatcccggc tccccgcgac agcctgacgg cgagcggccc gtttgccgcc
     3541 gcgctcggca atgccgaggg caatctggtg ctgcgcgcgc tcgccgcctt ccgcatccgc
     3601 tggcccgacc gtttgcccgc cggtctcgcc atccgcctcg ccaagaa
//
LOCUS       DATAZA010000413         1983 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4115733, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000413 DATAZA010000000
VERSION     DATAZA010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1983
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4115733"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..507
                     /locus_tag="VHZ56_10415"
     CDS             <1..507
                     /locus_tag="VHZ56_10415"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011579540.1"
                     /note="adds enolpyruvyl to UDP-N-acetylglucosamine as a
                     component of cell wall formation; gram-positive bacteria
                     have 2 copies of MurA which are active; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEX4298422.1"
                     /translation="LRGARPDHLQAALDVLARSGVGITPEAGGLRVRRNGNGIQPTDV
                     ETDPFPGFPTDLQAQFMALMTMSSGTSTIRETIFENRYMHVAELARFGADIRVDGQLA
                     TVRGVSQLKGAQVMATDLRASVSLVIAGLAARGETTVNRIYHLDRGFERLEEKLSRCG
                     AEIERVSG"
     gene            606..1028
                     /locus_tag="VHZ56_10420"
     CDS             606..1028
                     /locus_tag="VHZ56_10420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018426529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2948 family protein"
                     /protein_id="HEX4298423.1"
                     /translation="MPDLKLLALDSEDLDVISTATQDAVVRVGDMGFAKTDRRFALLM
                     NRFAWEEGGRTRQRKRAALSFGRVGDVKVAGIDLNAQEGVLELLAIRFTETESPSGTV
                     DLDFAGGGTVRLAVEVLEARLEDLGAAWAARATPVHTA"
     gene            1028..>1983
                     /gene="hisD"
                     /locus_tag="VHZ56_10425"
     CDS             1028..>1983
                     /gene="hisD"
                     /locus_tag="VHZ56_10425"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEX4298424.1"
                     /translation="MPVRLDSRHAAFAEEFETLLGSKREASEEVSVAVAAILDDVRLR
                     GDEAVLAYTDRFDRLPLTAATLAFSAAEIAAADAAISGEVRAALQFAHDRIVAHHEKQ
                     KPLDHIYQDALGVTLGTVWTPMDAVGIYVPGGTASYPSSVLMGAIPARIAGVGRIALT
                     VPSPGGIISPAVLAAAKLAGVTEIYRIGGAQAIAALAYGTETIRPVSKIIGPGNAYVA
                     AAKRQVFGTVGIDSIAGPSEVLVIADGSANAAWVAADLLAQAEHGGGAQSILVTTDAA
                     LADAVAREVDRQIALLPRADITRDGWREFGAIILVASLAEAV"
BASE COUNT          295 a          749 c          644 g          295 t
ORIGIN      
        1 ctgcgcggcg cccgcccgga ccacctgcaa gcggccctcg acgtcctcgc ccgttccggc
       61 gtcgggatca cgcctgaagc cggcggactg cgcgtccgcc gcaacggcaa cggcatccag
      121 ccgaccgacg tcgagaccga cccgtttccc ggcttcccga ccgacctgca ggcgcagttc
      181 atggcgctga tgaccatgtc gtcgggaacc tcgacgatcc gcgaaaccat tttcgagaac
      241 cgctacatgc atgtggcgga actcgcccgg ttcggtgccg acatccgcgt cgacggccaa
      301 ctcgccaccg tgcgcggcgt ctcccagctc aagggggcgc aggtgatggc aaccgatctg
      361 cgggcctcgg tgtcgctggt cattgccggg ctcgccgccc gcggcgagac gaccgtcaac
      421 cgcatctacc atctcgaccg tggtttcgag cggctggagg aaaagctgag ccgctgcggc
      481 gccgagatcg agcgcgtcag cggctaggcc ggcgccccgt tcccttgccg ggcggcggcc
      541 aaacttgtag atcggcagcg gaacgcccat ctcaccggca ctcccaccga cgacggatgc
      601 ccgaaatgcc cgatctcaaa ctgctggcac tcgacagcga agacctcgat gtcatctcca
      661 ccgccaccca ggacgccgtc gttcgcgtcg gcgacatggg ctttgccaag accgaccggc
      721 gctttgccct gctgatgaac cgtttcgcgt gggaggaggg gggtcggacc cgccagcgca
      781 agcgcgcggc gctgtctttc ggccgcgtcg gcgacgtcaa ggtggcgggc atcgatctca
      841 acgcacagga gggcgtcctc gaactgctgg cgatccgctt caccgagacc gagtcgccct
      901 ccggcaccgt cgatctcgat ttcgccggcg gcggcacggt ccggctcgcc gtcgaagttc
      961 tcgaggcgcg gctcgaggat ctgggcgccg cctgggccgc ccgcgccacg cccgtgcaca
     1021 ccgcctgatg cccgtccgcc tcgacagccg ccacgccgct ttcgccgagg aattcgagac
     1081 gctgcttggc tccaagcgcg aggcctccga ggaagtgagc gtcgccgtcg ccgccatcct
     1141 cgacgacgtc cggctgcgcg gcgacgaggc ggtcctggcc tacaccgacc gcttcgaccg
     1201 gctgccgctc accgccgcga cgctggcgtt ctcggcggcc gagatcgccg ccgccgatgc
     1261 tgccatctcc ggtgaagtca gagcggcgct ccagttcgcg cacgatcgca tcgtcgccca
     1321 ccacgagaag cagaagccgc tcgaccacat ctaccaggac gccctcggcg tcaccctggg
     1381 gaccgtctgg acaccgatgg atgccgtcgg catctatgtg cccggtggca ccgccagcta
     1441 tccctcgagc gtgctgatgg gagcgattcc ggcccggatc gccggtgtcg gtcgcatcgc
     1501 gctgaccgtg ccgtcgccgg gcggcatcat cagcccggcg gtgctcgccg cggcgaagtt
     1561 ggccggcgtc accgaaatct atcgcatcgg cggcgcccag gcgatcgccg cgctcgccta
     1621 cggcaccgag accatccggc cggtcagcaa gatcatcggg cccggcaacg cctacgtcgc
     1681 tgcggccaag cgccaggtgt tcggcaccgt cggcatcgac agcatcgccg gcccctccga
     1741 ggtcctcgtc atcgccgatg gctccgccaa tgcggcctgg gttgcggcgg acctgctggc
     1801 acaggccgag cacggcggcg gcgcccagtc gatcctcgtc accaccgacg cggcgctggc
     1861 cgacgccgtt gcccgcgaag tcgaccgcca gatcgccctg ctgccgcgcg ccgacatcac
     1921 ccgcgacggc tggcgggagt tcggcgccat tatcctggtc gcgtccctcg ccgaagccgt
     1981 cga
//
LOCUS       DATAZA010000414         1690 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3421850, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000414 DATAZA010000000
VERSION     DATAZA010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3421850"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..743)
                     /locus_tag="VHZ56_10430"
     CDS             complement(<1..743)
                     /locus_tag="VHZ56_10430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006104897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX4298425.1"
                     /translation="MRLTRRQTLAGLAGLAALPAVPSFAAAPPLPSSPVALSIIDVAG
                     NLALTKPAFAAYAAANSKLVSGITFNQATAPELPGKIQAEQAAGRLDIDLVLSGTDAL
                     SAGIAQNLWLKLLPDEASALPDLDSILLDPAKKMQALSQGFGVIVTYYPSGPLIEYMP
                     DQVADADAPKNAQGLLDWAKANPNKFLYARPANSGPGRTFMMGLPYLLGDSDPKDPVK
                     GWDKTWAYLKELGQYIEYYPTGTGALMKEL"
     gene            879..1592
                     /locus_tag="VHZ56_10435"
     CDS             879..1592
                     /locus_tag="VHZ56_10435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007820825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX4298426.1"
                     /translation="MPESALSPDGEAALRVRRRERSTSASAIYRDLQHQIVTMALKPG
                     TALGEQMLAGRYGVSRTPVREAFIRLSEERLVDVLPQQGTFVSRLDIALIPEAVVIRQ
                     ALEGATVEHAARIASEEDIAVLDDILAEQGLHRDRNALGRFMNADERFHEAIATIARL
                     PGLWSYLKPAKVHIDRARWLTLPFLGRTTPVIAEHQIIRDAIARHDPAAAREAMTVHL
                     QAVFPDIASLRTQFSDYFV"
BASE COUNT          271 a          532 c          616 g          271 t
ORIGIN      
        1 agctccttca tcagtgcgcc ggtgccggtg gggtagtact cgatgtactg gcccagctcc
       61 ttgagatagg cccaggtctt gtcccagccc ttcaccgggt ccttcggatc gctgtcgccg
      121 agcagatagg gcaggcccat catgaaagtg cggccagggc cggaattggc cggccgggcg
      181 tagaggaact tgttggggtt ggccttggcc cagtcgagca ggccctgcgc attcttgggc
      241 gcgtcggcgt cggcgacctg gtcgggcatg tattcgatca gcgggcccga aggatagtag
      301 gtgacgatga cgccaaagcc ctggctcagc gcctgcatct tcttggccgg atcgagcagg
      361 atggaatcga ggtccggcag ggcgctggct tcgtcgggca gcagcttgag ccagaggttc
      421 tgcgcgatgc cggcgctcag cgcgtcggtg cccgacagca cgaggtcgat gtcgaggcgg
      481 ccagcggcct gctcggcctg gatcttgccc ggcagctcgg gcgccgtggc ctggttgaag
      541 gtgatgcccg agaccagctt ggaattggca gcggcatagg ccgcgaaggc cggcttggtc
      601 agcgccaggt tgccggcgac gtcgatgatg ctgagggcga cgggcgaact cggcagcggc
      661 ggcgcagccg caaagctcgg gacggccgga agcgcggcaa ggccggcgag accggcaagc
      721 gtctgccggc gcgtaagtcg gatcatggtg tttcctccca ttggggcgcg ggccggtcgt
      781 tcctcgcgac agcttccgca gacggcttgc atactagtgc actagttgac acttgcaact
      841 gcaaatgcac gtgtagggca acggaacgag aggtcatctt gccagagtcc gcattgtcgc
      901 ccgatggcga ggccgcgctc cgggtgcggc ggcgcgagcg ctccaccagc gccagcgcca
      961 tctaccgcga cctgcagcac cagatcgtca cgatggcgct gaagccgggg acggcgctgg
     1021 gcgagcagat gctggccggc cgctacggcg tcagccgcac gccggtgcgg gaagccttca
     1081 tccggctgag cgaggagcgg ctggtcgacg tgctgccgca gcagggcacg ttcgtgtcgc
     1141 ggctcgacat cgcgctgatt cccgaggccg tggtgatccg tcaggcgctc gagggggcga
     1201 ccgtcgagca tgcggcccgg atcgccagcg aggaggacat cgccgtgctc gacgacatcc
     1261 tcgccgagca ggggctgcac cgcgatcgca atgcgctcgg gcggttcatg aacgccgacg
     1321 agcggttcca cgaggccatc gccaccatcg ccaggctgcc gggactgtgg agctacctca
     1381 agccggcgaa ggtccacatc gaccgcgccc gctggctgac gctgccgttc ctcggacgca
     1441 cgacgccggt gatcgccgag caccagatca tccgcgacgc catcgcccgg cacgatccgg
     1501 cagcggcgcg ggaggcgatg acggtgcacc tgcaggcggt gttcccggac atcgcgtcgc
     1561 tgcggacgca gttctccgat tatttcgtgt aaaacggact cacacatatg gtcttgcggc
     1621 agggctggcg gtggttcgga ccggagtccg gcgtgagcct cgacgaggtg cggcaggcgg
     1681 gcgcgaccga
//
LOCUS       DATAZA010000415         4955 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3305437, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000415 DATAZA010000000
VERSION     DATAZA010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4955
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3305437"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1656)
                     /locus_tag="VHZ56_10440"
     CDS             complement(<1..1656)
                     /locus_tag="VHZ56_10440"
                     /EC_number="1.8.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008197335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0050311 - sulfite reductase (ferredoxin)
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite/sulfite reductase"
                     /protein_id="HEX4298427.1"
                     /translation="MYRYDEFDAAFVKERTAQFRDQVMRRVRGEINEDQFRPLRLMNG
                     LYLQLHAYMFRIAIPYGTLGSKQLRKLAYIARTYDRGYGHFTTRTNIQFNWPRLSDIP
                     DIIAHLNEVEMHSIQTSGNCIRNISTDQFAGAAADEIIDPRPVAEILRQWSSLHPEFS
                     YLPRKFKIAMTAAPSDRAAIKFHDIGLKAVRNAEGEIGWEVWVGGGLGRTPMIAKLIR
                     PFVAHADLLAYCESIVRVYNRHGRRDNKYKARIKILVHETGIETIRAEVEAEYAEVRG
                     GQLTLPQAELDRITAYFAPPEFERVNTTSIDLVRETAADPAYGDWLERNLNAHRQAGY
                     VSVTVSLKPIGGAPGDATDVQMDAIADLAERYSFDELRVTHEQNLVLPHVKISDLRTV
                     YDALVAVGLADGNAGLITDMITCPGLDFCALANARSIPIAQAISQRFAAPERQREIGA
                     LKIKISGCINACGHHHVGHIGILGVEKKGTELYQISVGGDGTENAAIGDILGHGLGAD
                     EVPVAIEKLVDTYIARRQSPDEPFIAAYRRLGEAPFKEALYGNA"
     gene            complement(1643..1948)
                     /locus_tag="VHZ56_10445"
     CDS             complement(1643..1948)
                     /locus_tag="VHZ56_10445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017269143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2849 domain-containing protein"
                     /protein_id="HEX4298428.1"
                     /translation="MEILTGNELLSGATVYLARSGEWVEELQQARIFLKEEAEARDAA
                     IAATRTTMRINSLETETVTLRDGTIRPDRMRERIRAEGPTAPRFDRQHLGQDDHVSI"
     gene            complement(1950..3299)
                     /gene="cysG"
                     /locus_tag="VHZ56_10450"
     CDS             complement(1950..3299)
                     /gene="cysG"
                     /locus_tag="VHZ56_10450"
                     /EC_number="1.3.1.76"
                     /EC_number="2.1.1.107"
                     /EC_number="4.99.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0043115 - precorrin-2 dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0051266 - sirohydrochlorin ferrochelatase
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="siroheme synthase CysG"
                     /protein_id="HEX4298429.1"
                     /translation="MGELNTFPVSYKVQGQRIVIVGGGEEALSKARLVVKTTASIVII
                     ARKFTSDFNGLPVTLAERAFAASDLDGAVLVFVADDGPDGEAAKRESRARHIPLNVVD
                     SPDECDFYVPSIVERAPLSVAVSTEGDAPVLARLVRARIEALLPPELGQVARAAGALR
                     EEVAGRLDQQQAMRFYHDIVSGDARPAEALLEAHATDRAGAVWLIGAGPGAEDLLTLR
                     AQRLLQAADVIVHDQLVPEAVIEMGRRDAQRISVGKKKGHHSFTQAQINALLVRLAGE
                     GKRVARLKGGDPMVFGRAGEEIAALRKAGITYQIVPGISAALAAAADTATPVTLRNVS
                     SGVVFATAHGAEDAELDHWAALASTGITLALYMGGQIAMATAGKLLRRGMRPSMPAGI
                     VVNAGRSNRTFVRGTLGAMAANALVPDGPAIIFIGEAVAHGDWADATAIAEQNFKVA"
     gene            complement(3466..3786)
                     /locus_tag="VHZ56_10455"
     CDS             complement(3466..3786)
                     /locus_tag="VHZ56_10455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008838000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX4298430.1"
                     /translation="MPKITFIEASGKTYETEAEIGSTVMETAIMNGVPGIIAECGGAC
                     TCATCHAYVDPAWTEIVGPPSMMEEDMLDFAFEVKPNSRLSCQIKVKANLDGLVMRVP
                     SRQG"
     gene            complement(3824..4228)
                     /locus_tag="VHZ56_10460"
     CDS             complement(3824..4228)
                     /locus_tag="VHZ56_10460"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HEX4298431.1"
                     /translation="MSTDSLKRIEPVATQRTRGPIDLDFLGRQTMGDENLELEVLRMF
                     DQMSHVYYERIETSPAVPDLIHHLHALKGAAAGVGAFGLSGLAALAETELRAGEAVNP
                     ERIDDVHVAVEEVSAFIVQRLRIAQGIGAYRL"
     gene            4572..>4955
                     /locus_tag="VHZ56_10465"
     CDS             4572..>4955
                     /locus_tag="VHZ56_10465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298432.1"
                     /translation="MAKKSPSTDDAATLAFSAVEDALKDSVFGGPAPGPAQPSAQPEP
                     TFTPSRAANPRSDRARAADKIAAQSGSVANDDRFQGSRILYGLQSKSSQTPTLAATLI
                     AVGWVIAIVLVAIVRDGREFGTGAFF"
BASE COUNT          781 a         1783 c         1484 g          907 t
ORIGIN      
        1 cgcatttccg tacaatgctt ccttgaacgg cgcttcgccc agccgccgat aggccgcgat
       61 gaacggctcg tccgggctct gccgtcgggc gatgtaggta tcgaccagct tctcgatcgc
      121 caccggcacc tcgtcggccc cgagcccgtg cccgaggatg tcgccgatcg ccgcgttctc
      181 ggtgccgtcg ccgccgaccg agatctggta cagctcggtg cccttcttct cgaccccgag
      241 gatgccgatg tggcccacat ggtggtggcc gcaggcattg atgcagcccg aaatcttgat
      301 cttcagcgcc ccgatctcgc gctgccgctc gggcgcagcg aagcgctgcg agatcgcctg
      361 cgcgatcggg atcgagcgcg cattggccag cgcgcagaaa tccagccccg gacaggtgat
      421 catgtcggtg atcagcccgg cattgccgtc ggcgagcccc accgccacca gcgcgtcgta
      481 caccgtgcgc aggtcggaaa tcttcacatg cggcagaacc aggttctgct cgtgcgtcac
      541 ccgcagctcg tcgaacgaat agcgctcggc gagatcggcg atcgcatcca tctgcacgtc
      601 ggtcgcgtcg cccggcgccc cgccgatcgg cttcagcgac accgtaaccg acacgtagcc
      661 cgcctgccgg tgggcgttga gattgcgctc gagccagtcg ccataggccg ggtccgcggc
      721 cgtctcgcgc accagatcga tgctggtcgt gttgacccgc tcgaactccg gcggcgcgaa
      781 atacgccgtg atgcggtcga gctcggcctg cggcagggtc agttgcccgc ccctgacctc
      841 agcatactcc gcctcgacct cggcccggat cgtctcgatg ccggtctcgt gcaccaggat
      901 cttgatgcgc gccttgtatt tgttgtcgcg ccgcccgtgg cggttgtaga cgcgcacgat
      961 gctctcgcaa taggccagca ggtcggcatg cgccacgaac ggccggatca gcttggcgat
     1021 catcggcgtg cgcccgagac cgccgccgac ccacacttcc cagccgatct cgccctcggc
     1081 gttgcgcacc gccttgagcc cgatatcgtg gaacttgatc gccgcgcgat ccgacggcgc
     1141 cgccgtcatc gcgatcttga acttgcgcgg caggtacgaa aactccggat gcaggctcga
     1201 ccactggcgc aggatttcgg ccaccggccg gggatcgatg atctcgtccg ccgccgctcc
     1261 cgcgaactgg tcggtcgaga tattgcggat gcagttgccc gaggtctgga tcgagtgcat
     1321 ctcgacctcg ttcaggtgcg cgatgatgtc cggaatgtcc gacagccgcg gccagttgaa
     1381 ctggatgttg gtgcgcgtcg tgaagtgccc gtagccgcgg tcgtaggtgc gcgcgatata
     1441 ggccagcttg cgcaattgct tcgagcccag cgtgccgtat ggaatggcga tcctgaacat
     1501 ataggcgtgc agctgcaggt agagcccgtt catcagccgc agcggccgga actggtcctc
     1561 gttgatctcg ccgcgcaccc gccgcatcac ctggtcgcgg aactgcgccg tccgctcctt
     1621 cacgaacgcc gcgtcgaact cgtcatatcg atacatggtc gtcctggccc aggtgctggc
     1681 ggtcgaagcg cggggccgtc ggtccctccg cacggatgcg ctcgcgcatg cggtcgggac
     1741 ggatcgtccc gtcgcgcagc gtcaccgtct cggtctcgag cgaattgatc cgcatcgttg
     1801 tcctggtggc cgcgatcgcc gcgtcgcggg cctcggcttc ttccttgagg aagatgcgcg
     1861 cctgctgcag ctcctcgacc cactcgcccg agcgcgccag gtacaccgtc gccccgctca
     1921 gcagctcgtt gccggtgagg atttccatct cacgccacct tgaaattctg ctcggcgatc
     1981 gccgtcgcgt cggcccagtc gccatgcgcc acggcttcgc cgatgaaaat gatcgccggc
     2041 ccgtcgggca ctagcgcatt cgccgccatc gcccccagcg tgccccgcac gaacgtcctg
     2101 ttgcttcgcc cggcattgac gacgatgccc gccggcatcg acggccgcat gccgcgccgc
     2161 agcagcttgc ccgccgtcgc catcgcgatc tggccgccca tgtagagcgc cagcgtgatc
     2221 ccggtcgacg ccagcgccgc ccagtggtcg agctcggcat cctcggcacc atgggccgtt
     2281 gcgaacacca cgcccgacga cacgttgcgc agcgtcaccg gcgtcgccgt gtcggccgcg
     2341 gccgccagtg ccgcgctgat ccccgggacg atctggtacg tgatgcccgc cttgcgcagc
     2401 gcggcgatct cctcgccggc gcgcccgaac accatcgggt cgccaccctt gagccgcgcc
     2461 acgcgcttgc cctcgcccgc cagccgcacg agcagcgcgt tgatctgcgc ctgcgtgaag
     2521 gagtgatgcc ccttcttctt gccgacactg atccgctgcg catcgcgccg gcccatctcg
     2581 atcaccgcct cgggcaccag ttggtcgtgg acgatcacgt cggccgcctg cagcagccgc
     2641 tgtgccctga gggtgagaag atcttccgca cccggtccgg cgccgatcag ccacaccgct
     2701 ccggcacggt ccgtcgcatg ggcctccagc aacgcctccg ccggcctggc atcacccgac
     2761 acgatgtcat ggtagaaccg catcgcctgc tgctggtcga ggcggcccgc cacctcctcg
     2821 cgcagcgccc ccgccgcccg tgcgacctgc ccgagttccg gcggcagcag cgcctcgatc
     2881 cgggcccgca ccagccgcgc cagcaccggc gcgtcgccct ccgtcgatac cgctacgctc
     2941 agcggcgcgc gctcgacgat cgacggcacg tagaaatcgc attcgtcggg tgaatccacg
     3001 acatttaagg ggatatgtcg tgcacgcgat tcacgcttcg ccgcctcgcc atccggtcca
     3061 tcatcggcga cgaacaccag cacggcgccg tcgagatcgc tcgccgcgaa cgcccgttcc
     3121 gccagcgtca ccggcaagcc attgaaatcc gacgtaaatt ttcgcgcgat aatgacgata
     3181 gaagcagtcg tcttaacaac caaacgggct ttgctgaggg cttcttctcc accgccgacg
     3241 atgacgatgc gctgaccctg gaccttgtag ctgacgggga atgtgttcag ttcacccatt
     3301 cacggccttt cggacgctgc tataagccac ctttggcttt ctcgacaagc tattgaaata
     3361 caatagcttt tattttccat tacgagcctg tgcagtggaa cgagcatgag gctaggcccc
     3421 cgctcccgcc aatccgttcc gtccggctgc cagccgatgg aatggctagc cctgccgcga
     3481 cggcacccgc atcaccagcc cgtcgaggtt cgccttgacc ttgatctggc agctcagccg
     3541 gctgttcggc ttcacctcga aggcgaagtc gagcatgtcc tcttccatca tcgagggcgg
     3601 cccgacgatc tccgtccacg ccgggtccac ataggcatgg caggtggcgc aggtgcaggc
     3661 gccgccgcac tccgcgatga tccccggcac gccgttcatg atggctgtct ccatcacggt
     3721 cgagccgatc tccgcctcgg tttcataggt cttcccgctg gcttcgatga aggtgatttt
     3781 cggcatggcg ccgcatatac cgccgcccac cccgccgcaa ggactagagc cgataggctc
     3841 ctatgccctg cgcgatacgc agccgctgca cgatgaaggc cgagacctcc tcgactgcca
     3901 cgtgcacgtc gtcgatccgc tccggattga ccgcctcgcc cgcccgcagt tcggtttccg
     3961 ccagcgccgc aaggcccgac aggccgaacg cccccactcc ggccgccgct cccttgaggg
     4021 catggaggtg gtggatcagg tccggtaccg ccgggctcgt ctcgatccgc tcgtaataca
     4081 catggctcat ctggtcgaac atgcggagca cctcgagctc gaggttctcg tcgcccatgg
     4141 tctgccggcc gaggaagtcg agatcgatcg gcccccgcgt gcgctgcgtc gcgaccggtt
     4201 cgattcgctt gaggctgtct gtgctcatcg ccgcgttccc cgtgcagttc ctgtcgaact
     4261 gttggacgca ccatacgccc ccgcgcttgg ggcaatttta agtaagttgg ccaaatgccc
     4321 ggccccggtt tcaggctttg gtcaccaatc cgcccaaatt aacctttgct taagataccg
     4381 ttcggtttgc ctcaaattga ctgtatgttg aggcataacc cggcacgcgg cggtgagggg
     4441 gaagggttgg gggcgatgac tttgattcgc tttttaccca aatggtctgg agacccgaaa
     4501 gggacgacgg tccatgacaa ctcccgatgc cgcccggatc gcaacaagcc gacgcgagag
     4561 ttgtaaagag tatggcgaag aaatctccca gcaccgacga tgccgcaacc ctcgccttct
     4621 cggcggttga ggacgccctc aaggactccg tattcggtgg tcccgccccc gggccggccc
     4681 agccttccgc ccagccggag ccgaccttta ccccgtcccg cgcggccaat ccgcgctccg
     4741 accgcgcccg cgctgccgac aagatcgcgg cacagtccgg atcggttgcc aacgacgacc
     4801 gcttccaggg gtctcgcatc ctctatggcc tgcagtccaa atcgagccag accccgaccc
     4861 tcgccgcgac gctgatcgcc gtcggctggg tcatcgccat cgtcctcgtc gccatcgttc
     4921 gtgacggtcg cgagttcggc accggcgcct tcttt
//
LOCUS       DATAZA010000416        17045 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1796646, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000416 DATAZA010000000
VERSION     DATAZA010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 17045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17045
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1796646"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            439..594
                     /locus_tag="VHZ56_10470"
     CDS             439..594
                     /locus_tag="VHZ56_10470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298433.1"
                     /translation="MLLAEIEGEVQLALEPSVVVMSLSAPVGNFAAPTTPLCGSTTRA
                     TSDASPA"
     gene            730..1182
                     /gene="rpiB"
                     /locus_tag="VHZ56_10475"
     CDS             730..1182
                     /gene="rpiB"
                     /locus_tag="VHZ56_10475"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: protein motif:HMM:NF004051.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEX4298434.1"
                     /translation="MRLALGCDEAAYDLKLTLKAFLEQAGHQVTDFGTFDAAPVLYPD
                     IAEQAARSIVRGDNERGILLCGTGIGMAISANKIRGIRAAQCHDTYSAERAQKSNDAQ
                     VITIGARVVGPELAKAIVAAYLQSSFQPGSSSPKVARILDLEKVQAAG"
     gene            1231..2235
                     /locus_tag="VHZ56_10480"
     CDS             1231..2235
                     /locus_tag="VHZ56_10480"
                     /inference="COORDINATES: protein motif:HMM:NF016114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
                     /protein_id="HEX4298435.1"
                     /translation="METARQDSRAAAEAEPDLGLITEIAVLYYLEEVTQEDLAKRFGM
                     SRARVGRLLRRARELGVVDIRVQAPRSVQADVETELNRRFGLDRVLLALDQSDEDAQR
                     AAVAGLVADHLNRTLANDMIIAVGMGRNVGAVADNSFSPDRRRVVFVSAIGGSSRAGE
                     YMNSDHISRRLAARFGGESETLYAPALVSEPQLRAALIANDTVRQTLDRARRADIALI
                     GVGDVSENSNMVRMGWFSQQEIVEARLSGTVGDMMGYDFIDIDGKPSHVAMQNRVIGL
                     STADLRRIPDVVAIASESSKAAGILGALRTGTINTLATSVSNARLVLQLDDSTRGARG
                     "
     gene            complement(2232..3005)
                     /locus_tag="VHZ56_10485"
     CDS             complement(2232..3005)
                     /locus_tag="VHZ56_10485"
                     /EC_number="5.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEX4298436.1"
                     /translation="MTRPFYFGTNFKMRQTHPESRAFVEALGRHAVVEDVCRFVIPPF
                     TSLPGLPAVGQAGRIAIGAQNAHFAQQGAYTGEISVPMLAALDVELVMIGHAERRHDF
                     GETDEIIARKAAAVLGSGMTLLLCVGEDLAERRAGLTETVLRRQLGSGLAAAGAAVNL
                     RLWVAYEPVWSIGEAGLPATADDVAPAIACIRECLGELLGDRACAVPLLYGGSVNRDN
                     CAIYAALAGIDGLFVGRGAWTVEGYCEVMARGLAARRAR"
     gene            complement(3002..4234)
                     /locus_tag="VHZ56_10490"
     CDS             complement(3002..4234)
                     /locus_tag="VHZ56_10490"
                     /inference="COORDINATES: protein motif:HMM:NF002674.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tm-1-like ATP-binding domain-containing protein"
                     /protein_id="HEX4298437.1"
                     /translation="MDKTIAVLATLDTKGEEAAFVAGIIRGRGYRPLLVDCGIKGEPL
                     VTPDVTRDEIAAAAGTSIAEILARNDKNAAIEAMASGAARFVAARHAQGQLAGILGMG
                     GVQGTVIATRAMQALPVGVPKMMLSAVANGQAVFGPYVGSKDVTIMHSVADIMGLNML
                     TRQVMAAAAGAVTGMCDVATGEQRSGKPVVGMTMAGVTNPTAMAMGRLLEGSGYEVIG
                     FHCNGIGAKAMEELVDEGKIDLVLDLSPHDIGGLLRNGLMQARPDRLGASVERGVPIV
                     FVPGALDFILRGPIDGVPADLLARQHVRHNPIHTHIRASRAEMEAAGRFVGERLARSP
                     GPVRVVIPEGGFSQFNVEGGPLRDAAADAGFAAGLREALSKAGPNHVEIVAVPQHVND
                     SAFAQILADTIIGLTPSQ"
     gene            complement(4250..5548)
                     /locus_tag="VHZ56_10495"
     CDS             complement(4250..5548)
                     /locus_tag="VHZ56_10495"
                     /inference="COORDINATES: protein motif:HMM:NF012246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016984 - ribulose-bisphosphate
                     carboxylase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RuBisCO large subunit C-terminal-like
                     domain-containing protein"
                     /protein_id="HEX4298438.1"
                     /translation="MIPANPLDHVFAYPEAAAARDGVVATYFMECAPGEDVWSRAAGL
                     AVGQSIGTWTAVPGIDEAMLARHLGQVVTAYEVPPRELRSQVSDTPRTYVVQIAFPEV
                     NFGPQLPLLLTVLLGNDVSTSAQVKLLDVSVSRSLALGLGGPRHGLAGIRARLGVPDR
                     PLLLNVIKPNIGFDAATGAEMFAAAARGGCDIVKDDELLGNTGFSGSIERARAYRLAA
                     HRVFEETGHRALYCVNVTDRPDRMQSVARQAVEAGADMVMINAVASGLGALQALADDP
                     AIDVPILAHYAGSSAMTEGLGSGIASPLLLGKLMRLAGADASSFNSPYSVYPLLREKY
                     AQTARNLTMPLYDVRAALPVPGGGIHPATAARIIADLGADVLLSVGGAIQGHPQGATA
                     GARAMRQAIDAAASGVGLAEFAVDHEELRVAIGRWGASAQ"
     gene            complement(5545..6141)
                     /locus_tag="VHZ56_10500"
     CDS             complement(5545..6141)
                     /locus_tag="VHZ56_10500"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX4298439.1"
                     /translation="MSTPPDIAMEMFTVARRAHARGLQSGSGGNLSARLPGGERILIK
                     GTGGSFADLDPAALAEVVVATGEIVSGSPSSELHSHLEIYRRRPDVGGIFHCHAPWSI
                     ACAETLGDIPAIARHSLQKIGPVPVLTGMADPVAFTQAIGTLLEAQPALLAFVEARHG
                     IFAFGPTVTAASYNAEQVEETAQVAMLVALGRGRGVPQ"
     gene            complement(6138..7166)
                     /locus_tag="VHZ56_10505"
     CDS             complement(6138..7166)
                     /locus_tag="VHZ56_10505"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEX4298440.1"
                     /translation="MTSMNALIFNGPRQVAYAAAERPAAKPGHVVVRVRGCGICGTDM
                     HVYKGMPASWPVPGVRGHEIAGVIDSLGEGVDGLAAGDRVVVQPLVFCGRCSACRRGE
                     TNLCSNMYLIGGEVSGGFADYVAAPATSVFRVPDGLALEHAALAETLATPVHALQAHF
                     RGFVGSVVVLGAGAQGLLTLQLARLLGAKNVLVSDVAPTRLQLARALGATHIVDARST
                     DVVAAAREMSGGEGVDLVVDAAGLAVNRQQTVSMLRAGGTGIFLALGPNEAPISFGTL
                     VPRELHLHGTQCYTNADVARAIELLASGDVAAAPLVDVMPLAEGPAAFETLATDPGKH
                     IKIVLQPA"
     gene            complement(7163..10264)
                     /locus_tag="VHZ56_10510"
     CDS             complement(7163..10264)
                     /locus_tag="VHZ56_10510"
                     /inference="COORDINATES: protein motif:HMM:NF013256.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HEX4298441.1"
                     /translation="MSGMHRLRFTAEKLAARLQLMVPLVVRDRLTLAPVRLFAGDDSR
                     VGPDVDDSAWPTLSPGMAWGRHREAFTIRAGFTVPADWSGEIAVEIDLGRSAKLEALT
                     FLYGPEALALIDGEPVQGVDPNHPLLLLPQHCCDGAPHRLALAGWTGIRDERYEFGGI
                     SLVRLDPPTRRFHDLMRLALDCIEQMGEAEPARPRLISALDVAVGALDLREPPGDGFY
                     RSVPAALALLRRGIADAGPPLDTRVFGVGHAHLDLAWLWTLAQSRKKGAQTFATVLRL
                     MERYPEFRFSQSQPQLYRMVGERHPELLEQIKGRVAEGRWEPMGGMWVESDCNLAGAE
                     SLARQFVLGRRYFRETFGVDGAPILWLPDVFGYAAQLPQLIEQAGLSYFVTAKMSWNQ
                     YNRIPYDAFWWRGLDGTSVLTYLITTSKPGWWGATYSADLTPAEIAQTRRGQQQPELH
                     DELMIAYGHGDGGGGPTARMLEDARQLAGFPGMPRMRLGTALDFLTELEASAGPSLPT
                     WTGELYLELHRGTYTSQARTKRANRKMEVLLHDAEFLAAWASLQGAAYPHRELREAWE
                     LLCLNQFHDIIPGSSIGEVYADSARDYARIEAIGSAARDAALVTLDAVLPAATKMAIY
                     NPSPFARSEVIEFDGEPRLVTDVPAYGYLALRDGLPRATGNVFCGPVAGAADAGTHAE
                     ARWVLEHETIRLEIDEHGEIVRLLHKPLRREVLPAGARANVWQLFEDRPLDWDAWDID
                     VFYDDAPPTPAGGAMISIVEAGGLRGVLEIRRPLEASTIVQRVVLRQGSDRIDFETEI
                     DWRERHKLLKVAFPVAVLSPVATYDVQWGNVERPTHRNTSWDWARFETCAHKWVDLSE
                     GDFGVSLLNDCKYGHDINDNVIRLTALKGATFPDPGADLGAHRFTYSLLPHRNSWRDG
                     TVREAYALNDPLIVRHPSGAGGDGRPERQALVSVSSPFVAIETVKRAEDDAGIVLRAY
                     EFGRTRGRVAIDAAFPVARAAQCDLHESAGTALDANEIALDITPFQIVTVRLDGQHSD
                     RKP"
     gene            complement(10261..11103)
                     /locus_tag="VHZ56_10515"
     CDS             complement(10261..11103)
                     /locus_tag="VHZ56_10515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014330566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX4298442.1"
                     /translation="MSSSRTPGAAGGRIAKHLVLIAFTVLAAAPVLLIFLNSFKARRS
                     IFANPYALPDPTSFSLVGYDTVFARSNFALYYGNSLTVSLVSLVLILGLGSMIAFALA
                     EYPFTGNKPLAVFFIIGIMIPIRLGSVSLLQLVVSLHLVNTLLALIFVYVAQGLPLAV
                     FILTQFMRQVPRDLKDAARVDGANEYRIYLLVLPLVRPALATVAVLSIIPIWNDLWFP
                     LILAPGEATKTVTMGAMQFLGQFSNDWNAVLSALSLSAGPILALYLLFSRQFLRGLTA
                     GAVK"
     gene            complement(11093..12031)
                     /locus_tag="VHZ56_10520"
     CDS             complement(11093..12031)
                     /locus_tag="VHZ56_10520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006237989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX4298443.1"
                     /translation="MSQIENRTMPARRFPLHIVVFILPGALIYAIFMVYPLLASLLDG
                     FYAPDAAGAPAFVGIANFLRLLTDPSWASLFGNALGHSIVVFLINFLIQNPIALLLAT
                     LLANRTRLSGLYRAVIFAPAVLSLVIVAFVWELILSPLWGVAKSALIAVGLGAAYHPW
                     LGLPDTSLVTLALISAWQYVGVPMMLYFAALIAIPDDLIEAAVIDGAGPWRIFFSVKL
                     PLLLPIVGIVSLLTYIANISAFDVIFAVKGPTAGPNFASDTLMTLFYRTFFGYEFQQP
                     DPAMGGAIAGMTFLILMLGVVAYFFLWQRRVRSYEL"
     gene            complement(12098..13369)
                     /locus_tag="VHZ56_10525"
     CDS             complement(12098..13369)
                     /locus_tag="VHZ56_10525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019172053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4298444.1"
                     /translation="MKTKAYLMLGTLLTGILASSVAMADPVKLVIESWRQDDLAVWQD
                     TILPVFNKEHPDIQVVFQPTINTDYSTALATKIKAGTAGDLIMVEPYDFRLPMYQAGD
                     LAKLNGLSGLENFSDLVKAAWSTDDGKDVYAVPLEGVIHAFIYNQTIFDELKLTPPKT
                     EAEFLTLLKTVKDSGKYTPLAMGSGDSFVPGLLGFQLIGPNYWHGEDGRQGIIAGTQK
                     FTDPQYVATWSALKDWIPYLPDGYQGVKYADMQNLFTLGQAAVYPAGSWEIPIFNKAV
                     GSSFKMGVFAPPVPADGDKCYIDDMPDAGMAMNAHTANPDQAKTFLQWMTTEEFAKLW
                     GGAMPGFFPLSTYQIPVTDPLASAYLGFRKDCASTPRISYQIISRGTPNTDAEISRVT
                     ALVVNGQMTPEDAGKTIQGDLASWYAPQKGK"
     gene            complement(13444..14214)
                     /locus_tag="VHZ56_10530"
     CDS             complement(13444..14214)
                     /locus_tag="VHZ56_10530"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acyl homoserine lactonase family protein"
                     /protein_id="HEX4298445.1"
                     /translation="MTTTTYTIRALNTGYQQLDKAQYATFRKGAGTIIEHPVFCFLIE
                     GGGRRILVDTGMSHTEQSVRFHHQGRQDAGQAIHEQLAAVGLTPADIDIVIFTHLHWD
                     HCYNAERFAKARLVVSEIEYQFALDPTPPYWMTYEHPSSGLTPPWQGLHFDLVQGEEE
                     IVEGIRVLPTPGHSPGHQSVLVRTADGVYLIAGDLFFVRENLLPDAERGWPLSPIGRF
                     SNFVELWRSMEHALRRADHVLMTHDPTINDRQVYPPAP"
     gene            complement(14211..15215)
                     /locus_tag="VHZ56_10535"
     CDS             complement(14211..15215)
                     /locus_tag="VHZ56_10535"
                     /inference="COORDINATES: protein motif:HMM:NF016114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding domain-containing protein"
                     /protein_id="HEX4298446.1"
                     /translation="MSISTNATMLRCCYLFYQDQMTIQQIAERLDISRFKVSRHLKEA
                     QRRGIVEVQFHDPNVEFERLGLELEQLLGLRQAIVVPTPYGASPESVRLAVGRAGADI
                     FNDVTPETSVAITWGRTVAHMVDSLPADRLQAKRVVDLAGGFGEISSSVSARAVTLRS
                     AEKLGAECVQVPAPTIVGSVETARSLLAEPSIRRVLDLAAASQIAVTGIGPLNEDSLL
                     VKSGFLSDADLDLLRAKGAVGSVIGRFYDVDGNELDTEFRDRAIALDLERFKKIPSRI
                     AFAGGESKLDSLVGLARGRLISTLVTDSQTAAALAARFKSSAMDEDASPARVGVREET
                     "
     gene            complement(15250..16179)
                     /locus_tag="VHZ56_10540"
     CDS             complement(15250..16179)
                     /locus_tag="VHZ56_10540"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEX4298447.1"
                     /translation="MFLGATTWTFSWAPPYDEPLKAIAALGLHGAELTVWGDDFLRDY
                     YTAETNRHLKTLAGDLGLKLTDLFCIPQGIASNDKAKRQGAVDQFKRTLDVAQQLGMD
                     KVIALPPNPFDIDIPVLLGKATSQEWTVEFPKGDWKQNWLDVVDVLGRFAEECEQRKM
                     RVALEPHPHRMMHNAAGMLRLIDAIKSPAIGLNLDPSHLFPMGELANMVAHEVGDRIF
                     HTHISDNDGQTNAHWRPGKGKVDWRAFLKALVDIGYDGPLSLELEDVPGAAGYPGFNR
                     NPNSTSEIVRQHELARDYILALCDEQNIILKRP"
     gene            complement(16213..>17045)
                     /locus_tag="VHZ56_10545"
     CDS             complement(16213..>17045)
                     /locus_tag="VHZ56_10545"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HEX4298448.1"
                     /translation="VQEALVLKTCLNGATTMPQSLERDIADASAAGFEGVELWWDKVQ
                     AYLRDHTPADLKALLAAHKVVPVSICPLLIWPFRDIEPARASYRAAVELAPQIGCELV
                     IACPDFRPARLTRDEALARHAVELRDLAGVAAGHGVRLAIEPIGRHTLCAGANDALQM
                     IERAGSPDNVGVLLDTFHYFRSQVTDEELSGIPIDKLFIIHVNDTEDGAIDELKDANR
                     VYPLEGVIPLVQMLSRVVDRGYDGYLSVEIFRPEYWAQPGAEVAARSMQSVRNLITLL
                     "
BASE COUNT         2862 a         5793 c         5704 g         2686 t
ORIGIN      
        1 gtcttggcaa atggcccctc cgtgccgaac gggagggcct tttgtttgac gccctcccat
       61 ctcatcgggc aaatttctag ggttgcccgt tagacagtct attcgccaag ctccaatggt
      121 atcgcctcaa acgatctggt agcgagccat ccaggctccc atgatcaacg cacgaccgct
      181 agtccaaacc aagctggctg ttcatgagac tctccacgaa tgcggccacg tccgccgcgt
      241 cggcggtacc ctcgctttaa ggcgcggagc cgccatcgcc gtcaaattcg acgacagggt
      301 caccccgcag atcgcgcgtc gcggagacgt ggaaggtcga tcccgccacc ggccggctgc
      361 agcggacatg gcgcgcatcg ggcggcccct cgacgcctcc ccgacccgga cgggcttggc
      421 tcgagggtca tcaggtccgt gctgttggcc gaaatcgagg gcgaggtgca gcttgcattg
      481 gagccgtccg tcgtcgtcat gagcctcagc gccccggtcg gcaatttcgc ggcgccgacg
      541 accccgcttt gcggctcgac aacacgagct actagcgacg catcacctgc gtgagcactt
      601 gtcacgtttg gaccgcggtc gatccaaatg acgcgtccaa ctcgggcaaa ctgggtctat
      661 ttccgcgaat acgactggaa tattctgatc agacgtgcta tctctattac aaatgctcag
      721 gagatggtga tgcgtctggc gctcggctgc gatgaggcgg cctacgatct gaagctgacg
      781 ctcaaggctt ttctcgagca ggccggccac caggtgaccg atttcggtac cttcgacgcg
      841 gcgccggtgc tgtaccccga tatcgccgag caggcggcgc gctcgatcgt gcgcggcgac
      901 aatgagcgcg gcatcctgct gtgcggaacc ggcatcggca tggccatcag cgccaacaag
      961 atccgcggca tccgggccgc gcagtgccac gacacctatt cggccgagcg ggcgcaaaag
     1021 agcaacgacg cgcaggtcat caccatcggc gcccgcgtcg tcggccccga actggccaag
     1081 gcgatcgtcg cggcgtacct gcagtcgagc tttcaacccg gaagttcgtc ccctaaggtt
     1141 gcgcgcattc tggatctcga aaaagtccag gcggccggat agtcgagccc acggccccgc
     1201 cgccggctcg gcaggggcga tgggggcacg atggaaaccg ctcgacagga ttcccgcgcg
     1261 gcagcggagg ccgagccgga tctcggactg atcaccgaaa tcgccgtcct ctattacctc
     1321 gaagaggtga cacaggagga cctcgccaag cgcttcggca tgtcccgcgc ccgcgttggc
     1381 cgcctgcttc ggcgggcgcg cgaactgggc gtcgtcgaca ttcgggtcca agcaccgcgc
     1441 agcgtgcagg ccgacgtcga gaccgagctg aaccgccgct tcggcctcga ccgcgtgctg
     1501 ctggcgctgg accagagcga cgaggacgcc cagcgggccg ccgtcgccgg cctcgtcgcc
     1561 gaccatctca accggacgct cgccaacgac atgatcatcg ccgtcggaat ggggcgcaat
     1621 gtcggcgccg tcgccgacaa ttcgttctcg cccgatcgcc gccgggtggt cttcgtctcc
     1681 gccatcggcg gctcgtcgcg ggccggcgag tacatgaact ccgaccacat cagccggcga
     1741 ctggcggcac gcttcggcgg agaaagcgag acgctttacg ccccggcgct ggtgagcgag
     1801 ccgcagctgc gggcggcgct gatcgccaac gacacggtgc gccagacgct cgaccgtgcc
     1861 cgccgcgccg acatcgcgct catcggcgtc ggcgacgtca gtgagaacag caacatggtg
     1921 cgcatgggct ggttcagcca gcaggagatc gtcgaggcgc gcctgtccgg caccgtcggc
     1981 gacatgatgg gctacgactt catcgacatc gacggcaagc cctcgcacgt cgccatgcag
     2041 aaccgcgtca tcggcctgtc gacggccgac ctgcgccgca ttcccgacgt cgtcgcgatc
     2101 gccagcgaat ccagcaaggc cgccggcatc ctcggggcgc tgcgcaccgg caccatcaac
     2161 acgctggcga caagtgtctc caacgcgcgg cttgtgctcc agctcgacga cagtacgcgc
     2221 ggcgcccgcg gctagcgcgc ccgccgggcg gcaaggcccc gggccatcac ctcgcaatag
     2281 ccctcgaccg tccacgcccc gcgtccgacg aacagcccgt cgatgccggc gagcgcagcg
     2341 tagatggcac aattgtcgcg gttgacgctg ccgccataaa gcagcgggac ggcacaggcc
     2401 cggtcgccca gcaactcgcc gagacactcg cggatgcagg cgatcgccgg cgccacgtcg
     2461 tcggccgtcg ccggcaggcc ggcctcgccg atcgaccaga ccggctcgta ggcgacccag
     2521 agccgcagat tgaccgcggc gccggcggcc gcaaggccgc tgcccagctg tcgccgcagc
     2581 acggtctcgg tcagcccggc ccgccgctcg gcaagatctt cgccgacgca cagcagcagc
     2641 gtcatgcccg agcccaagac ggcagcggct ttcctcgcga tgatctcgtc ggtctcgccg
     2701 aaatcgtgtc tccgctcggc gtggccgatc atcaccagct cgacgtcgag cgccgccagc
     2761 atcggcaccg agatctcgcc ggtgtaggcg ccctgctgcg caaaatgcgc gttctgcgcg
     2821 ccgatcgcga tgcggcccgc ttgcccgacc gccggcagcc ccggcagcga ggtgaagggc
     2881 gggatgacga agcggcagac gtcctcgacg acggcatggc gtcccagcgc ctcgacgaag
     2941 gcccgcgact ccgggtgcgt ctggcgcatc ttgaaattcg tgccgaagta gaacggccgc
     3001 gtcattgcga cggcgtcagc ccgatgatgg tgtccgcgag tatctgggcg aacgccgaat
     3061 cgttgacgtg ctggggaacc gcgacgatct cgacgtgatt tggcccggcc ttcgagagcg
     3121 cctcgcgcaa tccggcagcg aagcccgcgt ccgccgccgc gtcgcgcaac ggaccgccct
     3181 cgacattgaa ctggctgaac ccgccctcgg ggatcaccac ccgcaccggt cccggcgacc
     3241 gcgccagccg ctcgccaacg aagcgaccgg cggcttccat ttcggcgcgc gaggcgcgga
     3301 tgtgggtgtg gatgggattg tgccgcacat gctggcgcgc caggaggtcg gcgggcaccc
     3361 cgtcgatcgg accgcgcagg atgaaatcga gtgcgcccgg cacgaacacg atgggaacac
     3421 cgcgctcgac gctggcgccc aagcggtccg gccgcgcctg catcaggccg ttgcgcagga
     3481 ggccgccgat atcatgcggg ctgaggtcga gcacgaggtc gatcttgccc tcgtccacca
     3541 gttcctccat cgccttggcg ccgatgccgt tgcagtgaaa gccgatcacc tcgtagccgc
     3601 ttccttcgag cagccgtccc atcgccattg ccgtcgggtt ggtgacaccg gccatggtca
     3661 tgcccaccac cggcttcccc gaccgctgct ctccagtggc gacgtcgcac atgccggtga
     3721 cggcgccggc ggcagccgcc atcacctgcc gggtcagcat gttgagcccc atgatgtcag
     3781 ccaccgaatg catgatggtg acgtccttgc tgccgacata ggggccgaac accgcctggc
     3841 cgttggccac cgccgacagc atcatcttcg ggacgcccac cggcagggcc tgcatggcgc
     3901 gggtcgcgat caccgtaccc tgcacgccgc ccatgccgag gattccggcg agttggccct
     3961 gcgcatggcg ggcagcgacg aaccgcgccg cgccgctggc catcgcctcg atcgccgcgt
     4021 tcttgtcgtt gcgcgcgagg atttcggcga tgctggtgcc ggccgccgcc gcgatctcgt
     4081 cgcgcgtcac gtccggggta accaggggct cgcccttaat gccgcaatcg accagcaacg
     4141 ggcgatagcc gcgaccgcgg atgatgccgg cgacgaacgc cgcctcctcg cccttggtgt
     4201 cgagcgtcgc cagcaccgcg atggtcttgt ccatggtctc gattccttcc tactgcgcgc
     4261 tggcgcccca gcggccgatg gccacccgga gctcctcgtg gtcaaccgca aattcggcca
     4321 gcccaacacc cgaggccgct gcgtcgatcg cctgccgcat ggcgcgcgcc ccggccgtgg
     4381 cgccctgcgg gtggccctga atggcgccgc cgacgctgag cagcacgtcg gcgccaaggt
     4441 cggcgatgat gcgcgccgcc gtcgccgggt ggatgccgcc accgggcacc ggcagcgccg
     4501 cacgcacgtc gtagagcggc atcgtgagat tgcgggcggt ctgcgcgtat ttctcgcgca
     4561 gcagcggata gacgctgtac ggcgaattga acgacgatgc atcggcgccc gccaaccgca
     4621 tcagcttccc cagcagcagc ggcgaggcga tgcccgagcc gagcccttcg gtcatcgccg
     4681 aagacccggc ataatgcgcg aggattggaa cgtcgatcgc cggatcgtcg gcgagggcct
     4741 gcagcgcccc gagccccgag gcgacggcat tgatcatcac catgtcggcc ccggcttcta
     4801 ccgcctgccg cgccaccgac tgcatgcggt cgggtcggtc ggtgacgttg acgcagtaga
     4861 gcgctcggtg cccagtctcc tcgaacacac gatgggcggc gagccgatac gccctggcgc
     4921 gctcgatgga gccgctgaag ccggtgtttc ccagcagttc gtcgtccttg acgatgtcgc
     4981 agccgccccg cgccgccgcc gcgaacatct ccgcccccgt cgccgcatcg aaaccgatat
     5041 tgggcttgat gacgttgagc agcagcggcc ggtcgggcac gcccagccgc gcccggatgc
     5101 cggcaaggcc atggcgcgga ccgccgaggc caagcgccag cgatcgcgac acggacacat
     5161 ccagcagctt gacctgggcc gaggtcgaca cgtcgttgcc cagcagcacc gtcagcagca
     5221 gcggcaattg cggaccgaaa ttgacctccg ggaaggcgat ctgcacgaca taggtccgcg
     5281 gcgtgtcgga gacttggctg cgcagctcgc gcggcggcac ctcgtacgcg gtgacgacct
     5341 ggccgagatg ccgcgccagc atcgcctcgt cgatccccgg caccgcggtc caggtgccga
     5401 tgctctgccc caccgcgaga cccgccgccc ggctccagac gtcctcgccc ggcgcgcatt
     5461 ccatgaagta cgtcgcgacc acaccatcgc gcgcggccgc agcctcggga taggcgaaca
     5521 catgatcgag cgggttggca gggatcattg cggcactcct ctgcctcgtc ccagcgccac
     5581 cagcatcgcc acctgcgccg tctcctcgac ctgctcggca ttgtagcttg ccgccgtcac
     5641 ggtcgggccg aaggcgaaaa tgccgtgccg ggcctcgacg aacgccagca gcgccggctg
     5701 cgcctcaagc agcgtgccga tcgcctgcgt gaaggccacc ggatcggcca tgccggtcag
     5761 caccggcacc gggccgattt tctgcagcga gtgacgggcg atggcgggga tgtcgccaag
     5821 cgtctcggcg caggcgatcg accacggcgc gtggcagtga aagatcccgc cgacatccgg
     5881 ccggcgccga tagatttcga gatgcgagtg gagctcgctc gatggcgacc cgctgacgat
     5941 ttcgccggtc gcaacaacga cctcggcaag cgccgcaggg tcgagatcgg cgaagctgcc
     6001 gccggtgccc ttgatcagga tgcgctcgcc cccgggcagc cgggcgctga gattgccgcc
     6061 gctgccggac tgcaggccgc gcgcatgcgc acggcgcgcc accgtgaaca tctccatggc
     6121 gatgtcgggc ggcgtgctca tgccggctgc agcacgatct tgatgtgctt gcccggatcg
     6181 gtcgcgagcg tctcgaacgc cgccggaccc tcggccagcg gcatcacgtc gaccagcggc
     6241 gcggcggcga cgtcgccgct cgccagcagc tcgatggcgc gggcgacgtc ggcgttggtg
     6301 tagcactgcg tgccgtgcag atgcagctcg cgcggcacca gcgtgccgaa ggagatcggc
     6361 gcctcgttcg gccccagcgc gaggaagatg ccggtgccgc cggcccgcag catcgacacc
     6421 gtctgctgcc ggtttacggc aagcccggcg gcgtcgacca ccagatcgac cccctcgccg
     6481 cccgacatct cgcgcgccgc cgcgacgacg tcggtgcttc gcgcgtcgac gatgtgcgtc
     6541 gctccgagcg ccctcgcgag ttgcaggcgc gtcggcgcca cgtcggagac cagcacattc
     6601 ttcgccccga gcagccgcgc cagctgcagc gtcagtaatc cctgcgcgcc ggcgccgagg
     6661 accacgaccg acccgacgaa gccgcggaaa tgcgcctgca gcgcatgcac cggcgttgcc
     6721 agcgtctcgg ccagcgctgc gtgctcgagc gcgagtccgt cggggacgcg gaagacgctc
     6781 gtcgcggggg ccgcgacata gtcggcaaag ccgcccgaga cctcgccgcc gatcaggtac
     6841 atgttggaac aaaggttggt ttcgccgcgc cggcaggcgc tgcaccggcc gcaaaacacc
     6901 agcggctgca ccaccacgcg atcgcctgcc gccagcccgt ctacgccctc accgaggctg
     6961 tcgatgaccc cggcgatctc gtgcccgcgg acacccggca ccggccagct cgccggcatg
     7021 cccttgtaga cgtgcatgtc ggtgccgcag atgccgcagc cgcgcacccg cacgacgaca
     7081 tggcccggct ttgccgccgg ccgctctgcc gccgcatagg ccacctgccg cggtccgttg
     7141 aagatgaggg cgttcatgct ggtcatggct tgcggtccga gtgttgtcca tccagtcgca
     7201 cggtgacgat ctggaacggc gttatgtcga gagcaatttc gttggcatcg agcgccgtgc
     7261 cggcgctctc gtgcaggtcg cactgggcgg cgcgcgcgac cggaaacgcc gcgtcaatgg
     7321 caaccctgcc gcgcgtgcgc ccgaactcat aggcccgcag cacgatgccg gcatcgtcct
     7381 cggcgcgctt gacggtctcg atcgcgacga acgggctgga gaccgacacc agggcctgcc
     7441 gctccggccg cccgtcgccg ccggccccgc tcggatggcg gacgatcagc ggatcgttca
     7501 gcgcgtaagc ctcgcggacg gtgccgtcgc gccacgaatt gcgatgcggc agaaggctgt
     7561 aggtgaagcg gtgcgcgccg agatcggcgc ccggatcggg gaacgtcgcg cccttcagcg
     7621 cggtcaggcg aatgacgttg tcgttgatgt cgtggccgta tttgcagtcg ttgagcaggc
     7681 tgacgccgaa atcgccctca ctcaaatcga cccatttgtg ggcgcaggtc tcgaatcgcg
     7741 cccagtccca cgaggtgttg cggtgcgtcg gacgctcgac attgccccac tgcacgtcat
     7801 aggtggcaac cgggctgagc accgcgaccg ggaaggcgac cttgagcagc ttatgccgct
     7861 cgcgccagtc gatctccgtc tcgaaatcga tgcggtcact accctgccgc agcacgacgc
     7921 gctgcacgat cgtgctcgcc tccagcggcc ggcgaatttc gaggacgccg cgcagtcccc
     7981 ccgcttcgac gatgctgatc atcgcgcccc ccgccggcgt cggtggcgca tcgtcgtaaa
     8041 agacgtcgat gtcccaggcg tcccagtcga gcggccgatc ctcgaacagc tgccagacat
     8101 tagcgcgcgc gccggccggc agcacctcgc gccgcagagg cttgtgcagc agccggacga
     8161 tctcgccgtg ttcatcgatc tcgagccgga tcgtctcgtg ctcaagcacc cagcgcgcct
     8221 cggcgtgcgt tccggcatcg gcagcaccgg cgaccgggcc gcagaacaca ttgcccgtcg
     8281 ccctcggcaa cccatcgcgc agcgccagat agccataggc cgggacatcg gtgacgaggc
     8341 gcggctcgcc atcgaactca atcacttccg atcgcgcgaa tggcgacgga ttgtagatcg
     8401 ccattttggt cgccgccggc agcacggcat cgagcgtcac cagcgcggcg tcgcgggcgg
     8461 cgctgccgat ggcttcgatg cgggcatagt cgcgggcgct gtcggcatag acctcgccga
     8521 tcgacgaccc cgggatgatg tcgtgaaact ggttgaggca gagcagctcc cacgcttccc
     8581 gcagttcgcg atgcgggtag gcagcgccct gtagcgacgc ccacgcggcg aggaactcgg
     8641 cgtcgtgcag cagcacctcc atcttgcggt tggcccgctt ggtgcgcgcc tgcgaggtgt
     8701 aggtgccgcg atgcaactcg agatagagct cgccggtcca ggtcggcagc gacggaccgg
     8761 cgctcgcctc gagctcagtt aggaaatcga gtgccgtccc gagccgcatc cggggcatcc
     8821 cgggaaagcc tgcaagctgc cgcgcatcct cgagcatccg cgccgtcggg ccaccgccgc
     8881 cgtcgccatg cccgtaggcg atcatcagct cgtcgtgcag ttcgggctgc tgctggcccc
     8941 ggcgcgtctg ggcgatctcg gccggcgtca ggtcggcgct gtaggtagca ccccaccagc
     9001 cgggcttcga cgtggtgatc aggtaggtca acacgctggt gccgtcgagc ccgcgccacc
     9061 agaatgcatc atatggaatg cggttgtact ggttccagct catcttggcg gtgacgaagt
     9121 acgacagccc cgcctgttcg atcagctgcg gcagctgcgc agcgtagccg aacacgtcgg
     9181 gcagccacag gatgggtgcg ccatcgacgc cgaacgtctc gcggaaatac cggcggccca
     9241 gcacgaactg ccgcgccagc gattccgcgc cggcgagatt gcagtcggac tcgacccaca
     9301 tcccgcccat cggctcccag cggccctcgg cgacccggcc cttgatctgc tcgagcaatt
     9361 cggggtggcg ctcgccgacc atgcggtaga gctgcggctg gctctggctg aagcggaact
     9421 cgggatagcg ctccatcagc cgcagcaccg tggcgaaggt ctgggcgccc ttcttccggc
     9481 tctgcgccag cgtccacagc caggcgaggt cgaggtgggc gtggccgacg ccgaacacgc
     9541 gtgtgtcgag cggcggcccg gcatcggcga taccgcgccg cagcagcgcc agcgccgccg
     9601 gcacgctgcg gtagaagccg tcgcccggcg gctcccgcag gtcgagcgca ccgaccgcca
     9661 cgtcgagcgc gctgatgagc cgcggccgcg ccggctcggc ctcgcccatc tgctcgatgc
     9721 agtcgagcgc cagccgcatc aggtcgtgga accgccgggt gggcgggtcg agacggacca
     9781 ggctgatgcc gccaaattcg taacgctcgt cgcggatacc ggtccagccg gcgagcgcca
     9841 ggcggtgcgg cgcgccgtcg caacagtgtt gcggcagcag cagcagcgga tggttgggat
     9901 cgaccccctg caccggttcg ccgtcgatca gcgccagcgc ttccgggccg tagaggaacg
     9961 tcagggcctc gagcttggca gagcgtccga ggtcgatctc gacggcgatc tcgccgctcc
    10021 agtcggccgg aaccgtgaag ccggcgcgga tagtgaaggc ctcgcgatgc cggccccagg
    10081 ccatccccgg cgaaagcgtc ggccaggcgc tgtcgtcgac atcggggccg acacggctgt
    10141 cgtcgccggc gaacaagcgc accggcgcca gggtgaggcg atcgcgaacc accagcggca
    10201 ccatcagctg cagccgcgcc gccagctttt ccgccgtgaa cctgagcctg tgcatgccgc
    10261 tcatttcacc gctcccgccg tcagcccgcg caagaattgg cgggagaaca gcaggtacag
    10321 cgccaggatc ggcccggcgc tgagcgacag cgccgagagg acggcgttcc agtcgttgga
    10381 gaactggccg aggaactgca tggcgcccat ggtgacggtc ttggtcgctt cgcccggcgc
    10441 gaggatcagc ggaaaccaca gatcgttcca gatcgggatg atggagagca ccgcgactgt
    10501 cgccagcgcc ggccgcacca gcggcagcac gaggaggtag atacggtact cattggcgcc
    10561 atcgacccgc gccgcatcct tcaaatcgcg cggcacctgt cgcatgaact gcgtcaggat
    10621 gaacaccgcc agcggcagtc cctgcgcaac atagacgaag atcagggcca gcagcgtgtt
    10681 gacgaggtgc agcgacacca cgagctgcag caggctcacc gacccgagcc ggatcggaat
    10741 catgatgccg atgatgaaga acaccgcgag cggtttgtta ccggtgaacg gatactccgc
    10801 cagcgcaaag gcgatcatgc tgccgagccc gaggatgagg acgaggctca ccagcgagac
    10861 ggtaaggctg ttgccgtaat agagcgcgaa gttcgagcgc gcgaacacag tgtcgtagcc
    10921 gacgaggctg aagctggtcg ggtcggggag cgcatagggg ttggcgaaga tcgagcgccg
    10981 ggccttgaag gaattgagga agatcagcag caccggcgca gccgccagga cggtgaaggc
    11041 aatcaagacc agatgcttgg cgatgcggcc gccggccgcc cctggcgtgc ggctagagct
    11101 catagcttct gacccgccgc tgccagagga agaagtaggc gacgaccccc agcatcagga
    11161 tgaggaacgt cattccggcg atggcgccgc ccattgccgg gtccggctgc tggaactcgt
    11221 agccgaagaa ggtgcgataa aagagcgtca tcagcgtatc gctggcgaag ttcggccccg
    11281 ccgtcggtcc cttgaccgcg aagatcacgt cgaaggcgct gatgttggcg atgtaggtca
    11341 gcagcgatac gataccgacg atcggcagca gcagcggcag cttgaccgaa aagaagatgc
    11401 gccacgggcc ggcgccgtcg atcaccgccg cctcgatcag atcgtccggg atggcgatca
    11461 gcgccgcgaa gtaaagcatc atcggcacgc cgacatattg ccaggccgag atcagggcga
    11521 gcgtcaccag cgaggtgtca ggcaggccga gccagggatg gtaggctgcc ccgagcccga
    11581 ccgcgataag ggcactcttg gcgacccccc agagcgggct gaggatcagc tcccagacga
    11641 acgccacgat gaccagcgag agcaccgccg gcgcgaagat caccgcgcgg tagagcccgc
    11701 tgagccgcgt ccggttggcg agtagcgtcg ccagcagcag cgcgatgggg ttctggatca
    11761 ggaaattgat gaggaagacg acgatgctgt ggccgagcgc gttgccgaag aggctcgccc
    11821 agctcgggtc ggtcagcagc cgcaggaaat tggcgatccc gacaaaggcc ggcgcgccgg
    11881 cggcatcggg cgcgtaaaag ccgtcgagca gcgacgcgag cagcgggtag accatgaaga
    11941 tcgcgtagat cagcgctccc ggcaggatga acacgacgat gtggagcggg aagcgccgcg
    12001 ccggcatggt cctgttctcg atctgcgaca tggggtgcat tccgctggta aaatggtggc
    12061 cggcagcagc gtgccgccgg ccacctcggg aggagtctta cttgcccttc tgcggggcat
    12121 accaggaggc gaggtcaccc tggatggtct tgccggcgtc ctcgggggtc atctgcccgt
    12181 tgaccaccag cgcggtcacc cggctgatct cggcatcggt gttcggcgtg ccgcgcgaga
    12241 tgatctggta ggagatgcgc ggcgtcgagg cgcaatcctt gcggaagccg agataggcac
    12301 tcgccagcgg atcggtgacc gggatctggt aggtcgagag cgggaagaag cccggcatcg
    12361 cgccgcccca gagcttggcg aactcctcgg tggtcatcca ctgcaggaag gtcttggcct
    12421 ggtccgggtt ggccgtgtgg gcgttcatcg ccatgccggc atcgggcatg tcatcgatgt
    12481 agcatttgtc gccgtcggcc ggcacgggcg gcgcgaacac gcccatcttg aacgagctgc
    12541 cgaccgcctt gttgaagatc gggatttccc acgatccggc cggatagacc gccgcctgcc
    12601 cgagcgtgaa caggttctgc atgtcggcat atttgacgcc ctggtagccg tcggggaggt
    12661 acggaatcca gtccttcagc gcgctccacg tcgccacata ttgcggatcg gtgaacttct
    12721 gcgttccggc gatgatcccc tgccggccgt cctcgccgtg ccagtaattg gggccgatga
    12781 gctggaagcc gagcaggccg ggaacgaacg aatcgccgct gcccatcgcg agcggcgtgt
    12841 acttgccgct gtccttgacg gtcttgagca gggtcaggaa ctccgcctcg gtcttgggcg
    12901 gcgtgagctt gagctcgtcg aagatggtct ggttgtagat gaaggcgtgg atgacgccct
    12961 cgagcggcac ggcgtagaca tccttgccgt cgtcggtgct ccacgccgcc ttcaccagat
    13021 cggagaaatt ctccagcccg gaaagcccgt tgagcttggc gaggtcgccg gcctggtaca
    13081 tcggcaggcg gaaatcgtaa ggctcgacca tgatcaggtc gccggccgtg ccagccttga
    13141 tcttggtggc cagcgccgtg ctgtagtcgg tgttgatggt tggctggaac accacctgga
    13201 tatcgggatg ctccttgttg aacaccggta gaatggtgtc ctgccagacg gcaaggtcgt
    13261 cctgccgcca gctttcgatc accagcttca ccggatcggc catcgccacc gaactggcga
    13321 ggatgccggt cagcagcgtg cccagcatga gataggcttt ggtcttcatg gtcgtctcct
    13381 ccaatcgccg cggtttctga cgcggcttgt gcttcaggat cgccggattt ctgcccggcg
    13441 aagtcatggc gccggcgggt acacctgccg gtcgttgatc gtggggtcgt gcgtcatcag
    13501 cacgtgatcg gcgcggcgca gcgcgtgctc catgctccgc cacagctcga cgaaattgga
    13561 aaaccgcccg atcggcgaga gcggccagcc ccgctcggcg tccggcagca ggttctcgcg
    13621 gacgaagaac aggtcgccgg cgatgaggta gacgccgtcg gcggtgcgca ccaggaccga
    13681 ctggtggccg ggactgtggc ccggcgtcgg cagcacccgg atgccctcga caatttcctc
    13741 ctcgccctgg acgaggtcga agtgcagacc ctgccagggc ggcgtcagcc cgctcgaggg
    13801 atgctcgtag gtcatccagt agggcggggt gggatcgagc gcgaactggt attcgatctc
    13861 gctgaccacg agccgcgcct tggcgaagcg ctcagcgttg tagcaatggt cccagtgcag
    13921 atgcgtgaag atgacgatgt cgatgtcggc gggcgtcagc ccgacggcgg cgagctgttc
    13981 gtggattgcc tgcccggcat cctgccgccc ctggtgatgg aagcggaccg actgctcggt
    14041 atggctcatg ccggtgtcga cgagtatccg ccggccgccg ccttcgatga ggaagcagaa
    14101 caccggatgc tcgatgatcg tgcccgcacc cttgcggaag gtcgcatact gcgccttgtc
    14161 gagctgctgg tagccggtat tgagcgcccg gatggtgtag gtggtcgtag tcacgtctct
    14221 tccctcaccc ccacgcgcgc ggggcttgcg tcttcgtcca tcgccgatga tttgaatcgc
    14281 gccgcgaggg cagcggccgt ctggctgtcg gtcaccagcg tcgagatcag ccggccgcgc
    14341 gccagcccga ccagcgagtc gagcttgctc tcgccgccgg cgaaggcgat gcgggacgga
    14401 attttcttga accgctcgag gtccagcgcg atggcacgat cgcggaactc ggtgtcgagc
    14461 tcgttgccgt cgacgtcgta gaaccgcccg atcaccgagc cgactgcgcc cttggcccgc
    14521 agcagatcga gatcggcgtc cgacaggaac cccgacttga ccaaaagcga atcttcgttc
    14581 agcggaccga tgccggtgac cgcgatctgg ctcgcggcgg caagatcgag aacgcgcctt
    14641 atgctcggct cggccagcag cgaccgtgcc gtctcgacgc tgccgacgat cgtcggagcc
    14701 ggcacctgca cgcattcggc gccgagcttt tccgcgctgc gcagcgtcac cgcccgggcc
    14761 gagaccgacg agctgatctc gccgaacccg ccggcgaggt cgacgacacg cttcgcctgc
    14821 agccggtcgg ccgggaggct gtcgaccata tgcgcaaccg tgcgccccca ggtgatcgca
    14881 acggaagtct ctggcgtgac atcgttgaag atgtcggcgc cggcgcggcc gaccgcgagg
    14941 cggacggatt cgggcgaggc gccgtaggga gtgggcacca cgatcgcctg ccgcaggccc
    15001 agcagctgct cgagctcgag ccccaaccgc tcgaactcga cgttgggatc gtggaattgc
    15061 acctcgacga tgccgcgccg ctgcgcctcc tttaggtggc gcgatacctt gaagcgcgaa
    15121 atgtcgagcc gctcggcgat ctgctggatc gtcatctggt cctggtagaa caggtagcag
    15181 cagcgcagca tggtcgcgtt ggttgagatg ctcatttgcc tgtccccgtc ccagctcccg
    15241 cagttcgcct cagggtcgtt tcagaatgat gttctgttca tcgcaaagcg ccaggatgta
    15301 gtcgcgggcg agctcgtgct ggcggacgat ctcgctggtc gagttcggat tgcggttgaa
    15361 acccggatag ccggcggccc cgggcacgtc ctcgagctcc agcgacagcg ggccgtcata
    15421 gccgatgtcg accagcgcct tgaggaaggc gcgccagtcg accttgccct tgcccggccg
    15481 ccagtgcgcg ttggtctgcc cgtcattgtc ggaaatgtgg gtgtgaaaga tccggtcgcc
    15541 gacttcatgg gcgaccatgt tggctagctc gcccatcgga aacagatggc tcggatcgag
    15601 gttgagaccg atggccggcg acttgatcgc atcgatcagc cgcagcatgc cggcggcgtt
    15661 gtgcatcatg cgatgcggat gcggctcgag cgccacgcgc atcttgcgct gctcgcattc
    15721 ctcggcgaag cggccaagca cgtcgacgac gtccagccag ttctgcttcc agtcgccctt
    15781 cggaaactcc accgtccatt cctgcgacgt ggccttgccg agcagcaccg ggatgtcgat
    15841 gtcgaacgga ttgggcggca gcgcgatgac cttgtccatg cctagctgct gcgccacgtc
    15901 gagcgtgcgc ttgaactggt cgacggcgcc ctggcgcttg gctttgtcgt tgctggcgat
    15961 gccctgcggg atgcagaaca aatcggtgag cttgagcccg aggtcgcccg ccaacgtctt
    16021 cagatggcga ttggtctccg ccgtgtagta gtcgcggagg aaatcgtcgc cccagaccgt
    16081 gagctcggcg ccgtgcaggc cgagcgctgc gatcgccttc agcggctcgt cgtagggagg
    16141 ggcccaggag aaggtccagg tcgtcgctcc gagaaacatc gataagtctc cagttggcag
    16201 ccgccgcagg ggctacagca gcgtgatgag gttgcggacc gattgcatcg accgggccgc
    16261 cacttcggcg cccggttgcg cccagtactc cggacggaaa atctcgaccg agaggtagcc
    16321 gtcataaccg cggtcgacga cgcggctcag catctggacc agcgggatga ccccctcgag
    16381 cggatagacg cggttggcgt ccttgagctc gtcgatcgcc ccgtcctcgg tgtcgttgac
    16441 gtggatgatg aacagcttgt cgatggggat gccgctgagt tcctcgtcgg tcacctgcga
    16501 gcggaaatag tggaaggtgt cgagcagcac gccgacattg tccggcgacc cagcgcgctc
    16561 gatcatctgt agcgcgtcgt tcgcacccgc gcagagggtg tggcgcccga tcggctcaat
    16621 ggcgagccgc acgccgtggc cggcggcaac ccccgccaaa tccctgagct cgaccgcgtg
    16681 gcgcgccaag gcttcatcgc gggtcaggcg cgccggccgg aaatccgggc acgcaatgac
    16741 cagttcacag ccgatctgcg gcgccagctc aaccgcggcg cgataggagg cgcgggccgg
    16801 ctcgatgtca cgaaacggcc agatcaggag tgggcagatg ctgaccggca cgaccttatg
    16861 cgcagcgagc aacgccttta ggtcggccgg cgtgtggtcg cgcagatagg cctgaacctt
    16921 gtcccaccag agttcgacac cctcgaagcc agccgcggat gcgtccgcga tgtcgcgctc
    16981 cagcgattgc ggcatggtcg tcgcgccgtt caggcaagtc ttcagcacaa gcgcctcctg
    17041 cacat
//
LOCUS       DATAZA010000417        13776 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4000871, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000417 DATAZA010000000
VERSION     DATAZA010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 13776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13776
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4000871"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..587)
                     /locus_tag="VHZ56_10550"
     CDS             complement(<1..587)
                     /locus_tag="VHZ56_10550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009449935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX4298449.1"
                     /translation="MPSADIGLIGLAVMGSNLALNIAEHGYTIAVHNRTASKIDDFVV
                     TAKAQGLDGKIVPEADLKAFIQAVKRPRSIIIMVKAGQPVDEMIEQLLPMLEKGDAIL
                     ECGNSLYTDTQRRFDYLQPKGIGYLGIGVSGGEEGARHGPSIMVGGAEAQWKNAQPIL
                     EAISAKFNGEPCCAYLGQGGAGHFVKTIHNGIEYG"
     gene            753..1523
                     /locus_tag="VHZ56_10555"
     CDS             753..1523
                     /locus_tag="VHZ56_10555"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015888288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX4298450.1"
                     /translation="MDSLSQFSLAGKRALVTGSSRGIGLAIAGALAGAGADVILNGRD
                     TSALGEATASLADSGARARAVAFDVTSADSVGEAVAFIEDEIGAIDILVNNAGTQHRA
                     PLEQFPLERFEQVLATNVSSVFLVGQAVARRMIPRGRGRIINICSLMSTVARTSIAPY
                     AASKAAVANLTRGMATEWAQHGLNVNGIAPGYFRTPLNAALVADPEFNSWIERRTPMR
                     RWGDVAELGGAAIFLASDASSFVNGHILYVDGAFMATV"
     gene            1593..2165
                     /locus_tag="VHZ56_10560"
     CDS             1593..2165
                     /locus_tag="VHZ56_10560"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015888289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046316 - gluconokinase activity [Evidence
                     IEA];
                     GO_process: GO:0046177 - D-gluconate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HEX4298451.1"
                     /translation="MAKDFQLLACVVSLVPARIIVCMGVSGSGKSVVGSAVARRLHAP
                     FLEGDDYHPAANKEKMRAGIPLTDADRWPWLDALAAALHETAGTKGVVVSACSALKRS
                     YRDRLTERAGEPVLFVYLEGSRELLETRLAGRHHEFMPASLLDSQLATLEPPAPDENA
                     ITVPDRESIEIVADRIVRQLGHLKVFKRKQ"
     gene            complement(2171..3304)
                     /locus_tag="VHZ56_10565"
     CDS             complement(2171..3304)
                     /locus_tag="VHZ56_10565"
                     /inference="COORDINATES: protein motif:HMM:NF014046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ARMT1-like domain-containing protein"
                     /protein_id="HEX4298452.1"
                     /translation="MKPDPQKRYRDFVASTMKTRIPAILRTAEEGFDAAIVAQLRAIG
                     RAVEAGAPMVMDLDGWPFIGWEDMPARVNGRRIGEAPFFDFEYWLYFRILAAVRFAET
                     RADPFRHTKHRDLDKHLAWADDALGRTNSLADGLRLSLAANTHDLSQVAAPGSTHEFG
                     AALLDLDGAPYRRLNLIADNFGGEFVADLVLAIVAAEQGIEAIVHVKQLPMFVSDVTS
                     DDVTILLDRVGAHSDFGQRLAAAVRVGTIRFASSSFWSSPKFFDRLPEAELNSGDGTL
                     TVLKGDLNFRRAVGDVSLPIETPFAELPVQPPAPMLSLRSIKSYCVAGITEWPAGVSR
                     TDFPMDGSIVAVQQIPAKAAVMPSPPSEPVALPRLQRWLRRGS"
     gene            complement(3344..3874)
                     /locus_tag="VHZ56_10570"
     CDS             complement(3344..3874)
                     /locus_tag="VHZ56_10570"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008597889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEX4298453.1"
                     /translation="MRYALVDTALGTFGLAWTAAGVARVALPGRDRARTEIWISREPA
                     EPGFPEGALADLPERIRRYARGEPEDFSDVPLDLGGVVEFNRRAYAELVRIGYGETTT
                     YGALARTLGDVTLSRAVGQAMGQNPIPLIVPCHRVLGADGKAGGFSSPGGVSAKMRML
                     ALEHAASPTGQYAFGF"
     gene            complement(3882..4883)
                     /locus_tag="VHZ56_10575"
     CDS             complement(3882..4883)
                     /locus_tag="VHZ56_10575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008839320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298454.1"
                     /translation="MWDFSIGRTLGFMGQTLPFIVLRIIVYFGIAVAFVLVTGVGAGV
                     GWGVGAFGGPDFRAGTIFWGGFAGFVLTAGVLFFLREYILYMVKAGHIAVLVELIDGR
                     GVPQGQGQIAYATEIVRANFAETNVLFGVDLLIKGVLAAILGLIQGIASFLPIPGLSN
                     VVALVRAFLRVAVGLMDEVVLGYLFRTREANPWQGAQTALVLYAQNYKVMLKNAAWLT
                     VIMYVLSFVVFLVMLAPAAALVWFIPNAWGAGGFVFAIIFAWAVKAALIEPFAIAAMM
                     EVYFRVIEGQTPDPAWDQRIGEVSRKFRDLRDKAADWAGARPAAPGAPFTAPGGPVV"
     gene            complement(4951..5259)
                     /locus_tag="VHZ56_10580"
     CDS             complement(4951..5259)
                     /locus_tag="VHZ56_10580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298455.1"
                     /translation="MTNFVRRVRAWVTPHHLAQLGILALLLAGLRTIGEYFRLQWNGG
                     VLPAVVGPLLLGAMLAVAGAFLGLILYFFGRDRLALGLSVIGIGALVVYRLLALPGLG
                     "
     gene            complement(5256..5846)
                     /locus_tag="VHZ56_10585"
     CDS             complement(5256..5846)
                     /locus_tag="VHZ56_10585"
                     /inference="COORDINATES: protein motif:HMM:NF037625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX4298456.1"
                     /translation="MSLREDKRRWMMREVQAAALDLFEANGYGAVSVEAIAAAAGVSA
                     PTVYRHFGTKERIVLWDDYDPDLLASIAAHARKLPPLAAIEAGLVEALDRIYETDARR
                     ILRRSRLLLAEPLLRVANAPVVAEMRAGLGAILVLSYARLGEDRAGLLAAVVMVALER
                     AVDRWVAARGKTSLLTHFRDAFDDLRSVVLTEGAPA"
     gene            complement(5902..6252)
                     /locus_tag="VHZ56_10590"
     CDS             complement(5902..6252)
                     /locus_tag="VHZ56_10590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008873756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HEX4298457.1"
                     /translation="MLASVLTGLVALIHVYIVVLEMLLWDTDRGRRAFGTTPEFSRAS
                     KVLAANQGLYNGFLAAGLVWGIWLGHPGDGVKIFFLLCVAIAGIYGAATVNVRIALIQ
                     TVPALLALAAVLFT"
     gene            complement(6366..6548)
                     /locus_tag="VHZ56_10595"
     CDS             complement(6366..6548)
                     /locus_tag="VHZ56_10595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004445431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HEX4298458.1"
                     /translation="MHKDQIEGAGKQAKGAVKDAAGKMTGDVGLQVEGKMDKAAGQVQ
                     SAVGKAKDDTRKELKH"
     gene            complement(6693..7157)
                     /locus_tag="VHZ56_10600"
     CDS             complement(6693..7157)
                     /locus_tag="VHZ56_10600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298459.1"
                     /translation="MRRAVLCLAVILADGPAVAAEGWTAQMQQDEGGPVLVAAVSGDG
                     DAKTLPSLQMMCDGKKGVMLRYDMASDDGQPGDEADFLFENESTKGDLHMAYEAGDGA
                     FAGYFRKTDPIVTLLHTGPEVTVSDVEGNYPAQTFTLAGSGKAIDAVLKGCK"
     gene            complement(7168..7461)
                     /locus_tag="VHZ56_10605"
     CDS             complement(7168..7461)
                     /locus_tag="VHZ56_10605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298460.1"
                     /translation="MLIKRDVLEAIRRGDVTLQFRRWTRPSVKAGGTLKTAIGVLQIG
                     RIDEIRPEDVTLADVQRAGFADLPDFHKWLGTMKQGPLFHRIEVSYLAPASTR"
     gene            complement(7531..7926)
                     /locus_tag="VHZ56_10610"
     CDS             complement(7531..7926)
                     /locus_tag="VHZ56_10610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298461.1"
                     /translation="MSPIAKLSLAAACALWTLPALAAPVHITVPGGTFDYSSPSSPYF
                     VDPLDNYSIYSPDQPYDPVEAAVERNVIVLHQYHTAQPLNPELAAALIRNGESYSQHW
                     ARCAAHYATYELAGDTYVDGRGVPQPCRL"
     gene            complement(8037..8122)
                     /locus_tag="VHZ56_10615"
     tRNA            complement(8037..8122)
                     /locus_tag="VHZ56_10615"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8087..8089),aa:Leu,seq:taa)
     gene            complement(8231..8824)
                     /locus_tag="VHZ56_10620"
     CDS             complement(8231..8824)
                     /locus_tag="VHZ56_10620"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEX4298462.1"
                     /translation="MTTTDLIIKTDRLILRPFEKADLEQVLSYYALPDVQRYLDWKAR
                     DKSEARTAFDALRKQTRLTRPGDILSLAVVRKNDSHVIGHVSLKWTDATAGQGEVRFA
                     IAPLFRRKGYGSEAVRAVVTHGFNEHRFHRIFARTAGQNEGSARLLKALGMRLEAHYR
                     EHALFQGEWDEELHFAILDREWHRGAKVREISRHKVA"
     gene            complement(8923..9534)
                     /locus_tag="VHZ56_10625"
     CDS             complement(8923..9534)
                     /locus_tag="VHZ56_10625"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEX4298463.1"
                     /translation="MNHVPLPVTTLYAPIYPIETARLRLRPFNRADVDAVHAYRSLPE
                     VAAYLFDPPMTREDCAEAVRSRAGQIAFAGDGDKILLAVERQSDARLIGEVSLIWRSV
                     TDQQAEIGYVLHPDGQRQGFATEAAAALVDFGFRMVGLHRIYARCDARNTASARVMER
                     LGMSQEAHFREHTRVQGRWDEELIYAVLDRDWPAEASPVATGS"
     gene            9675..10058
                     /locus_tag="VHZ56_10630"
     CDS             9675..10058
                     /locus_tag="VHZ56_10630"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX4298464.1"
                     /translation="MRFAGKVLSMFLCSCEDCQRATGTGHSAVALARPADVRVTGETR
                     SFTRPANSGATLTRWFCPACGTPLYARSSRAAELLMLPIGFFGGGADWYVPNQLIFAR
                     SHREWDVVAAELPQHATYRDGGAMM"
     gene            10055..10384
                     /locus_tag="VHZ56_10635"
     CDS             10055..10384
                     /locus_tag="VHZ56_10635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008597961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HEX4298465.1"
                     /translation="MTAASDAMGDRLRPLVPRGLVEKKMFGGLAFMLDGNMLVGTTAK
                     GALLVRVDPDRMDEALQRPGASAMHMGAKVMTGFIAVDPGALPDAAAIKDWIAYARAY
                     VKTLPAK"
     gene            10392..10856
                     /locus_tag="VHZ56_10640"
     CDS             10392..10856
                     /locus_tag="VHZ56_10640"
                     /inference="COORDINATES: protein motif:HMM:NF016854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HEX4298466.1"
                     /translation="MPMTSNTTMDHLAERVRDILGDDPRVTEKTMFGGLTFLLDGHIL
                     VGTKKDGRVLLSVGKEHFEAALARPGASAMNHNGRRMTGFVWIEPDAIEDDDDLREWV
                     TAAYGWVSRMPAGKATTKRTAAKKPMAKKAPAKAVAKSPEKTTARKPARSGP"
     gene            11186..11536
                     /locus_tag="VHZ56_10645"
     CDS             11186..11536
                     /locus_tag="VHZ56_10645"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF020034.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4298467.1"
                     /translation="MKRLIDAAQPGPLLPGAFVLGRFVGITEGDELVAIAGDRLRLPG
                     YHELCTICSHPDFRGRGYARIVSSAIAEAIVARGDTPYLMVVPDNVPAVGLYRSLGFE
                     PRRELCFTLLRRAA"
     gene            11655..11921
                     /locus_tag="VHZ56_10650"
     CDS             11655..11921
                     /locus_tag="VHZ56_10650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298468.1"
                     /translation="MKTAPTFVAVIALVAPLASPVLADAKADAWTNCSKQIIDNTDVS
                     RDALKTFQLNKVGGGYEMTGQDEEHRTISCQAGPDGRVTWLHIG"
     gene            complement(11918..12415)
                     /gene="gpt"
                     /locus_tag="VHZ56_10655"
     CDS             complement(11918..12415)
                     /gene="gpt"
                     /locus_tag="VHZ56_10655"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000310 - xanthine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HEX4298469.1"
                     /translation="MNEPRTKSFPVSWDQFHRDSRALAWRLNSEGPFEACVAITRGGL
                     VPAAIVARELNIRVVESVSVKSYDHQMQTEVKVTKPISADIIAKARAGRKILIVDDLV
                     DTGATARAVRDMLPGAHFATVYAKPKGREMVDTFITEVSQDTWIFFPWDLDVAYVPPI
                     SGATD"
     gene            complement(12433..13203)
                     /locus_tag="VHZ56_10660"
     CDS             complement(12433..13203)
                     /locus_tag="VHZ56_10660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018427598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-binding protein"
                     /protein_id="HEX4298470.1"
                     /translation="MSTTANPTAALVVIGDEILSGRTRDVNIGATAEFCTDLGIDLME
                     VRVVADIEADIVAAVNAVRARYTYVFTTGGIGPTHDDITADAIAKAFGVALPINPEAR
                     AMLEARWTDRGIEPNEARLRMARIPEGASLIVNSVSAAPGFRIGNVHVMAGVPVIMRA
                     MLEAIAPTLTGGRKVQSVTIRCRVGEGNIGGPLAALQLQYPDVKMGSYPRMGDGTVMT
                     ELVLRSADEAGLAEAARAVHAMVVAEHARAGLPEPDPY"
     gene            13357..>13776
                     /locus_tag="VHZ56_10665"
     CDS             13357..>13776
                     /locus_tag="VHZ56_10665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011438960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HEX4298471.1"
                     /translation="MTYVDAETKSRRTSGVIPLHGEAGFAGMRKAGQLTGEALDLLVE
                     HVKPGVTTAALDKLAYDFAMDHQAIPATLFYKGFRHSICTSINHVVCHGMPEDRPLRD
                     GDIVNIDLTLIVDGWYGDSSRMYAVGEISRKAERLIEV"
BASE COUNT         2313 a         4561 c         4721 g         2181 t
ORIGIN      
        1 tcgccatact cgatgccgtt gtggatggtc ttgacgaaat ggccggcgcc gccctgcccc
       61 agataggcgc agcacggctc gccgttgaac ttggccgaga tcgcctcgag gatcggctgg
      121 gcgttcttcc actgcgcctc ggcgccgccg accatgatcg acgggccatg ccgcgcgcct
      181 tcttcgccac cggacacgcc gatgccgaga taaccgatgc ccttgggctg caggtagtcg
      241 aagcggcgct gcgtgtcggt gtagagcgag ttgccgcatt cgaggatcgc gtcgcccttt
      301 tcgagcatcg gcagcaattg ctcgatcatc tcgtcgaccg gctggccggc cttgaccatg
      361 atgatgatgg agcgcggccg cttgaccgcc tggatgaacg ccttgaggtc ggcctcgggg
      421 acgatcttgc cgtcgagccc ctgggccttg gccgtcacca cgaaatcgtc gatcttgctc
      481 gcggtgcggt tgtggaccgc gatggtgtag ccgtgctcgg cgatgttcag cgccaggttg
      541 gagcccatca cggcgagccc gatcaggccg atatcggcag acggcattag cttttcctca
      601 cgctacatat ggtctttctg ggcgcgcttt tggcatgcgt cagggggttt tgccagcgca
      661 aaagcaggcg ttgccgcccc tggcggatgc gctttcagac tgctgaccgc gggccgtcga
      721 cgggctagtc ttggcgctca caggagcatc ggatggacag tctttcgcaa ttcagcctcg
      781 ccggaaaacg tgccctcgtc accggttcga gccgggggat cggcctcgcc atcgccgggg
      841 cgctggcggg cgccggcgcc gatgtcatcc tcaacggccg cgacacctcg gcgctgggcg
      901 aggcgacggc gagccttgcc gattccggcg cgcgggcccg ggccgtggcg ttcgacgtca
      961 ccagcgccga cagcgtcggc gaggcggtgg cgttcatcga ggacgagatt ggcgccatcg
     1021 acatcctcgt caacaacgcc ggtacccagc atcgcgcgcc gctcgagcaa ttcccgctgg
     1081 agcgcttcga gcaggtgctg gcgaccaacg tgtcgtcggt gttcctcgtc ggacaggcgg
     1141 tagcgcggcg catgatcccg cgcggtcgcg gcaggatcat caacatctgc tcgctgatga
     1201 gcacggtggc ccggacgtcg atcgcgccct atgctgcgag caaggcagcc gtagcgaacc
     1261 tgacccgcgg catggcgacc gaatgggcgc agcacgggct caacgtcaac ggcatcgcgc
     1321 cgggatactt caggacgccg ctcaacgcgg cgctggtcgc cgacccggag ttcaacagct
     1381 ggatcgagcg gcggacgccg atgcgccgct ggggcgacgt cgccgagctc ggtggcgccg
     1441 cgatctttct cgcctcggac gcctccagct tcgtcaacgg ccacatcctc tacgtcgacg
     1501 gcgccttcat ggcgaccgtc tgaagatcgg gccgcgacaa atcccgtgac agtgcttctg
     1561 ggtgcttgcc aaggagtccc gcggcggcgc aaatggctaa ggatttccag cttctggcgt
     1621 gcgtcgtgag cctcgttccg gcccggatca tcgtttgcat gggcgtgtcg ggcagcggca
     1681 agagcgtcgt cgggtccgcc gtcgcgcgcc ggctgcacgc cccgttcctc gaaggggacg
     1741 attatcatcc ggccgccaac aaggaaaaaa tgcgggccgg cattccgctc accgacgccg
     1801 accgctggcc ctggctcgac gccctcgccg cggcgctgca tgagacggcg ggcaccaagg
     1861 gcgtggtggt gagcgcgtgc tcggccttga agcgatccta ccgggaccgg ctgaccgaac
     1921 gcgccggcga gcccgtgctg ttcgtctatc tcgagggctc gcgtgaactg ctcgaaacgc
     1981 gcctcgcggg acggcatcac gagttcatgc ccgcgagcct gctcgacagc cagctcgcga
     2041 cgctggagcc gccggccccc gacgaaaacg ccatcaccgt gccggaccgg gagtcgatcg
     2101 agatcgtggc cgatcgcatc gtgcgacagc tcgggcatct caaggtcttc aagcgcaagc
     2161 agtagcgcgc tcagctgcct cgccgcagcc agcgctggag gcgcggcagg gcgaccggct
     2221 cggacggcgg gctgggcatc accgcggcct tcgccgggat ctgctgcacg gcgacgatcg
     2281 agccgtccat cgggaaatcg gtgcgcgata cgccggccgg ccattcggtg atgccggcga
     2341 cacagtagga cttgatcgag cgcagcgaga gcatcggcgc gggcggctgc accggcaact
     2401 cggcgaatgg agtttcgatc ggcaggctga cgtcgccgac ggcgcggcgg aagttgaggt
     2461 cgcccttgag caccgtcaac gtcccgtcgc cgctgttcaa ttccgcctcc ggcaggcgat
     2521 cgaagaattt cggcgacgac cagaacgagc tcgaggcgaa gcggatggtc cccacccgca
     2581 ccgcggcggc gagccgctgg ccgaaatcgc tgtgcgcgcc gacgcgatcc agcaggatgg
     2641 tcacgtcgtc gctggtgacg tccgagacga acatcggcag ctgcttgacg tgaacgatgg
     2701 cctcgatgcc ctgctcggcg gcgacgatgg cgaggacgag gtcggcaacg aattcgccac
     2761 cgaaattgtc ggcgatgagg ttgagccggc ggtacggcgc gccgtcgagg tcgagcagcg
     2821 cagcaccgaa ttcgtgggtg ctgccgggag cggcgacctg cgagagatca tgggtgttgg
     2881 cggcgaggga cagccggagg ccgtcggcca ggctgttagt tcggccaagg gcatcgtcgg
     2941 cccaggcgag atgcttgtcg aggtcgcggt gcttggtgtg gcggaacggg tcggcgcggg
     3001 tttcggcaaa gcgcacggcg gcgaggatgc ggaaatacag ccagtattcg aaatcgaaga
     3061 agggggcttc gccgatccgc ctgccattga cgcgggcggg catgtcctcc cagccgatga
     3121 agggccagcc gtccaggtcc atcaccatcg gcgcaccggc ctcgacggcg cggccgatgg
     3181 cgcgcagctg cgccacgatt gccgcgtcga agccttcctc ggcggtgcgc aggatcgccg
     3241 ggatgcgggt cttcatcgtg ctggcgacga agtcgcggta gcgcttctga ggatcgggct
     3301 tcaccatgcc gatccgccga aattgaccac ggtcggaagg ctcctagaac ccgaaagcgt
     3361 attgcccggt cgggctcgcg gcatgttcga gcgccagcat ccgcatcttg gcgcttacgc
     3421 ctcccggcga ggaaaagcca cctgccttgc catcggcgcc gagaacccgg tggcacggca
     3481 cgatcagcgg aatgggattc tggcccatcg cctggccgac ggcgcgcgac agcgtcacat
     3541 cgcccagcgt ccgggccagc gcgccatagg tcgtggtctc gccgtagccg atcctgacaa
     3601 gctcggcgta ggctcggcgg ttgaactcga ccacgccgcc cagatcgagc ggaacgtcgg
     3661 agaaatcctc cggctcgcca cgggcgtagc ggcggatgcg ctcgggcagg tcggccagcg
     3721 cgccttcggg aaagccgggc tccgccggtt cgcgcgaaat ccagatctcg gtgcgggcgc
     3781 ggtcgcggcc ggggagcgcc acgcgcgcca cccctgccgc cgtccaggcg aggccgaagg
     3841 tgccgagcgc ggtgtcgacg agggcgtagc gcatgccggc gtcagaccac cggcccgccg
     3901 ggggcggtga acggcgcgcc gggtgcggcc gggcgcgcgc cggcccagtc ggccgccttg
     3961 tcgcgcaggt cgcggaattt cctgcttact tcgccgatcc gctggtccca ggccggatcc
     4021 ggggtctggc cctcgatgac gcggaaatag acttccatca tcgccgcgat ggcgaacggc
     4081 tcgatcagcg ccgccttcac cgcccaggcg aagatgatgg cgaagacgaa accgccggcg
     4141 ccccaggcgt tggggatgaa ccagaccagc gccgcggcag gcgccagcat caccaggaac
     4201 accacgaagg acagcacgta catgatgacg gtcagccagg cggcgttctt gagcatcacc
     4261 ttgtagttct gggcgtagag caccagcgcg gtctgcgcgc cctgccaggg attggcctcg
     4321 cgcgtgcgga agagatagcc gagcaccact tcgtccatga ggccgacggc gacgcgcagg
     4381 aacgcccgca ccagcgccac gacgttgctg agcccgggga tcggcaggaa cgacgcgatg
     4441 ccctggatca gcccgaggat cgcggcgagc acgcccttga tcagcaggtc gacgccgaac
     4501 agcacgttgg tctcggcgaa gttcgcgcgc acgatctcgg tggcataggc gatctggccc
     4561 tgcccctgcg gtacgccgcg accgtcgatc agctcgacca gcacggcgat gtggccggcc
     4621 ttgaccatgt agaggatgta ttcgcggaga aagaacagca cgccggcggt cagcacgaag
     4681 ccggcgaagc cgccccagaa gatggtgccg gcgcgaaagt ccggaccgcc gaacgccccc
     4741 acgccccagc ccactccggc gccaacgccg gtcaccagca cgaaggcgac cgcgatgccg
     4801 aaatagacga tgatcctcag gacgatgaac ggaagcgtct ggcccatgaa gccgagcgtg
     4861 cggccgatgg aaaagtccca catgacgtga acctctgtcg cgcgcccccg cgcccggcga
     4921 cgctagcgcg aatcgaatgg aagccgcaat tcagccgagg ccgggcaagg ccagcaacct
     4981 gtagacaacc agcgcgccga tgccgatcac cgacaacccg agcgccagcc ggtcgcggcc
     5041 gaagaagtac aggatgaggc cgaggaaggc gccggccacg gccagcatgg cgcccagcag
     5101 cagcgggccg accacggccg gcaaaacgcc gccattccat tgcaggcgga aatactcgcc
     5161 aattgtccgc aggccggcga gcagcagcgc gaggatgccc aactgtgcca gatggtgcgg
     5221 cgtcacccag gcgcggaccc gccggacgaa attggtcatg ccggagctcc ttcggtgagg
     5281 acgacgctgc gcagatcgtc gaaggcgtcg cggaaatgcg tcagcaggga ggtcttgccg
     5341 cgggctgcaa cccagcggtc gacggcccgc tcgagcgcca ccatgaccac cgccgcgaga
     5401 agcccggcgc gatcttcgcc gagccgcgca taggacagca ccaggatcgc gcccagcccg
     5461 gcacgcatct ccgccacgac aggggcattg gcgacccgca ggagcggctc cgccagcaac
     5521 aggcggctgc ggcgcaagat gcggcgcgcg tcggtctcgt agatgcggtc cagcgcctcg
     5581 accagtccgg cctcgatggc ggcgagcggc ggcagcttgc gggcgtgtgc ggcgatggac
     5641 gccaagaggt ccggatcgta gtcgtcccac aggacgatgc gctccttggt gccgaagtgc
     5701 cggtagacgg tcggagccga gacgccggca gccgcggcga tcgcctcgac cgacaccgcg
     5761 ccgtagccgt tggcctcgaa caggtcgagg gcggcggcct gcacctcgcg catcatccag
     5821 cggcgtttgt cctcgcgcag gctcaattga tagccactct catttgttag tgactatcag
     5881 aaattggcga aatcggtcaa gtcaggtgaa cagcaccgcg gccagggcga gcagcgccgg
     5941 gaccgtctgg atcagggcga tgcggacgtt gacggtggcg gcgccgtaga tgccggcaat
     6001 ggccacgcag agcaggaaga aaatcttcac gccgtcgccg ggatggccca gccagatgcc
     6061 ccagaccagc ccggcggcga ggaacccgtt gtagagtccc tggttggcgg cgaggacttt
     6121 gctggccctc gagaattcag gcgtcgtgcc gaaggcccgg cggccgcggt cggtatccca
     6181 cagcagcatc tcgaggacga cgatgtagac gtggatgagg gcgacgaggc cggtgaggac
     6241 gctggcaagc atgccgggag aattggccga gtcgcgcgca aataaaaagg ccgccccttg
     6301 cggggacggc ctcttgtcgt tggctgagcg tgagcgtcag ccgatcaccg aggtgtcgtt
     6361 aggcctcagt gcttcagttc cttgcgggtg tcgtctttcg ccttgcccac agcggactga
     6421 acctgtccgg cggccttgtc catcttgccc tcgacctgaa ggccgacgtc accggtcatc
     6481 ttgccggccg catccttgac ggcgcccttg gcctgcttgc cggcgccttc gatctggtcc
     6541 ttgtgcatgg aatacctcct gtttgagttc ggagggaaaa cggggcgacc ccggtccggg
     6601 ttccgcggca atttcaatat ccattggtga ccaaacgttt agctggcgga aaggaaccgg
     6661 gaccggcgcg acgaaggcag cgaggcgagg gcttatttgc agcccttgag cacggcgtcg
     6721 atcgccttgc ccgacccggc cagcgtgaag gtctgggcag ggtaattgcc ctcgacgtcg
     6781 ctgaccgtca cctcgggacc ggtgtgcagc aacgtgacga tcggatcggt cttcctgaag
     6841 tagccggcga aggcgccgtc accggcctcg taggccatgt gcagatcgcc cttggtggat
     6901 tcattctcga acaggaagtc cgcctcgtcg ccgggctggc cgtcgtccga cgccatgtcg
     6961 tagcggagca tcacgccctt cttgccgtcg cacatcattt gcagcgacgg cagggtcttg
     7021 gcatcgccgt cgccggagac cgcggcgacc agcaccgggc cgccctcgtc ctgctgcatc
     7081 tgcgccgtcc aaccttcggc cgcaacagcc ggtccatccg cgaggatgac ggcaaggcaa
     7141 aggacggcgc gacgcattgg gaaacctcta tcgggttgac gctggcgcga gatagctcac
     7201 ttcaatgcgg tgaaaaagcg gcccctgctt catcgtcccg agccatttgt ggaagtccgg
     7261 cagatctgcg aatccggcgc gctgcacgtc ggccagggtc acgtcttccg gccggatttc
     7321 gtcgatgcgg ccgatctgca gcacgccgat ggcggtcttc agcgtaccgc cggccttcac
     7381 cgacggacgg gtccagcggc ggaattgcag ggtgacgtcg ccgcgccgga tcgcctccag
     7441 cacgtctcgc ttgatcagca tggctcgcgt aatcctcccg ccgcgactat gcgcatgtcg
     7501 gcggcaggag aaaagtccgg atcggccgcg tcagagccgg cagggctgcg gtacgccgcg
     7561 gccgtcgaca taggtgtcgc cagcaagctc gtaagtggcg tagtgcgccg cgcagcgagc
     7621 ccagtgctgc gaataggact cgccgttgcg gatcagcgcc gcggccagct cgggattgag
     7681 cggctgggcg gtgtgatact ggtgcaggac gatgacgttg cgctcgaccg ccgcttcgac
     7741 cgggtcgtac ggctggtccg gcgagtagat ggaataattg tccagcgggt cgacgaaata
     7801 cggcgagctg ggagagctgt agtcgaaggt cccgccgggg acggtgatgt ggacgggcgc
     7861 ggcaagcgcc ggcagggtcc acagcgcgca ggcagcagcg agggaaagtt tggcgatggg
     7921 cgacatggcg gcgactcctc tccggccctg acgtggccga gcaccgattc aatgcgccgg
     7981 cgcccgaaaa ggtgcatcac acagtgcggt gaagacgggc ccatggttag cgaagctggt
     8041 gcgggcggcg ggacttgaac ccgcacggct atacagcccc gggattttaa gtcccgtatg
     8101 tctaccgttc catcacgccc gccagcctat gctgtcccac ggcccgggcg aaatctcaac
     8161 gcgttcgtca ggcgccgcag ttcctgcagc actcgcctcg cggccacacg gcctgggatc
     8221 gaaacaggac ctaggcgacc ttatgccggc tgatctcgcg aaccttggcg ccgcgatgcc
     8281 actcgcggtc gaggatggcg aaatgcagtt cctcgtccca ctcgccctgg aacagggcat
     8341 gctcgcggta atgggcctcg agccgcatgc cgagggcctt gagcaggcgc gcggagccct
     8401 cgttctgacc ggcggtgcgg gcaaaaatcc ggtggaagcg gtgctcgttg aatccatggg
     8461 tcacgacggc gcgcacggcc tcgctgccgt agcccttgcg gcggaagagc ggcgcaatgg
     8521 cgaagcgcac ttccccttgc ccggcggtgg cgtccgtcca tttgagcgag acgtggccga
     8581 tgacatggct gtcattcttg cgcaccacgg ccagcgacag gatgtctccc gggcgggtca
     8641 gccgcgtctg cttgcgcagc gcatcgaatg cggtcctggc ttcgctcttg tcgcgggcct
     8701 tccagtccag atagcgctgc acatcgggca acgcgtaata gctcagcacc tgttcgaggt
     8761 ctgccttctc gaacgggcgc aggatcaatc ggtcagtctt gatgatgaga tctgtggtcg
     8821 tcatgcgagc cgtcctccgc tacgtgctca gcccctgaca ccatgaacgt caccttcaat
     8881 ccgcggttcc ggcccgcgag tgaactaaat tttcacctgt cgtcacgaac ccgtggcgac
     8941 tggcgaggcc tcggccggcc aatcacggtc gaggacggcg tagatcagtt cctcgtccca
     9001 gcggccctgg acgcgggtgt gttcccggaa atgcgcctcc tggctcatgc ccagccgctc
     9061 catcacgcgg gcagatgcgg tattgcgcgc gtcgcagcgg gcgtagatgc ggtgcagccc
     9121 gaccatgcga aagccgaaat cgaccagcgc agcggcggct tcggtggcga agccctgccg
     9181 ctgtccgtcg ggatggagga catagccgat ttcggcctgc tggtcggtga cgctgcgcca
     9241 gatcagggag acctcgccga tcagccgcgc atccgactgg cgctcgacgg cgagcagtat
     9301 cttatccccg tcgccagcga aggcgatctg tccggctcgc gaccgcacgg cctcggcaca
     9361 gtcctcgcgg gtcatcggcg gatcgaagag gtacgccgca acctcgggca ggctgcgata
     9421 ggcatggacc gcgtcgacat cggcacgatt gaagggccgc agccgcagcc gcgccgtctc
     9481 gatcggatag atcggggcat agagcgtggt gacgggaagc gggacgtggt tcacgggccg
     9541 cggcgtagcc ctccccgagg gtcaaatcaa cccggcttgc cgcagtcgtg gaagacgtgc
     9601 agcctgcccc catgcgtccg gcgccacgtc caattgtcga tcttgccgca tcctgtgcct
     9661 gcggtgcagt agaggtgcgc ttcgcgggca aggtgctgtc gatgttcctg tgctcctgcg
     9721 aggactgcca acgggcgacg gggaccggcc attccgctgt cgcgctcgcc cgcccggcgg
     9781 acgtgagggt caccggcgag acccggtcct tcacacggcc ggccaattcc ggcgccaccc
     9841 tcacccgctg gttctgcccg gcctgcggca caccactcta tgcccggtcg agccgtgccg
     9901 ccgaactgct gatgctgccg atcgggttct tcggcggcgg tgccgactgg tacgttccca
     9961 accagctgat ctttgcgcgg agccaccgcg aatgggacgt cgtggcggcg gaactgccac
    10021 agcatgcgac ctacagggac ggcggagcga tgatgtgacc gcagcgtccg acgcgatggg
    10081 cgaccgcctg cgaccgctgg tgccgagagg cctggtcgaa aaaaagatgt tcggcggcct
    10141 cgccttcatg ctggacggca acatgctggt cggcacgacg gccaagggcg cgctgctcgt
    10201 tcgcgtcgat cccgacagga tggatgaagc gctgcagcgt cccggcgcct ccgccatgca
    10261 catgggcgca aaggtgatga ccggcttcat cgcggtcgat cccggggcgt tgcccgacgc
    10321 ggccgcgatc aaagactgga tcgcctacgc ccgcgcctac gtcaaaaccc tccccgccaa
    10381 gtgaggccgc catgccgatg acgtcgaata cgacgatgga ccaccttgcc gagcgcgtcc
    10441 gcgacattct cggcgacgat ccccgcgtca ccgaaaagac catgttcggc ggcctgacct
    10501 tcctgctcga cggccatatc ctcgtcggca ccaagaagga cggccgcgtc ctgctcagcg
    10561 tcggcaagga gcatttcgag gccgccctgg cccggcccgg cgcttcggcg atgaatcaca
    10621 atggccgccg gatgaccggc ttcgtctgga tcgagccgga cgccatcgag gacgacgacg
    10681 acctgcgcga gtgggtcacg gcggcctatg gctgggtcag ccggatgccg gcgggaaagg
    10741 cgaccacgaa aagaacggcg gccaagaaac ctatggcaaa gaaagcgccc gcgaaggccg
    10801 tggcgaagtc tccggagaag accacggccc ggaaaccggc gaggtctggc ccatgatcga
    10861 tcaccccctc gacaatcaga tctgggccgc cctgaccggc cggcaggccg agcacgccat
    10921 cggcgccggc gaggtccgga tgttccgccc ggaaatcgct cccgccgccg gcattgcccg
    10981 ggtcacggcc gagaaccttt cggctctcgc cgccatggtg ccggcgggga ccacactcat
    11041 ccttcactcc cccgaaccgt tcacgccgcc ggccgaactc gagatcgtcg accggcaccc
    11101 gctgctgcag atggtcgcga acaagctcac gccggccgcg cgctcgggcg cggtgaagga
    11161 gctcggtgtc gccgacctgc cggcgatgaa gcggctgatc gatgccgccc agcccggtcc
    11221 gttgctgccc ggggcattcg tcctcgggcg cttcgtcggc atcacggaag gcgatgagct
    11281 cgtcgcaatc gccggggatc ggctccggct gcccggatac cacgagctct gcacaatctg
    11341 ctcgcatccg gattttcgcg gccggggcta cgccaggatc gtgtcctcgg ccatcgcgga
    11401 ggcgatcgtc gcgcgcggcg acacgcccta tctgatggtg gtgccggaca acgtcccggc
    11461 ggtggggctc taccggagcc tgggcttcga gccgcgccgc gagctctgtt tcaccctgct
    11521 gcggcgcgcc gcctaggccg gttggcgctg cggtcgccag cttggtcggg gcaatcccgg
    11581 gaggatttat cttcggttgc gaaagtatta cggtcggagg ggttgcgcgc acgttgtcgc
    11641 cgaggagcat ggccgtgaag actgcgccaa cctttgttgc ggtgatcgcc ctggtggcgc
    11701 cgctcgcctc gccggtcctg gccgacgcca aggcggacgc gtggaccaat tgcagcaagc
    11761 agatcatcga caacaccgac gtgtcgcggg acgcgctcaa gacgttccag ctcaacaagg
    11821 tcggcggcgg ctacgagatg accgggcagg acgaggaaca ccgcaccatc tcgtgccagg
    11881 cgggaccgga cggccgcgtc acctggctgc acatcggcta gtcggtggcg cccgagatcg
    11941 gcggcacgta ggcgacgtcg aggtcccagg gaaagaaaat ccaggtgtcc tggctgacct
    12001 cggtgatgaa ggtgtcgacc atctcgcggc ccttgggctt ggcgtagacg gtggcgaaat
    12061 gcgcgccggg gagcatgtcg cgcaccgccc gcgccgtggc cccggtgtcg accaggtcgt
    12121 cgacgatcag gatcttccgg ccggccctgg ccttggcaat gatgtcggcc gagatgggct
    12181 tggtcacctt cacctcggtt tgcatctggt ggtcgtagct cttgaccgag acgctctcga
    12241 cgacgcggat gttgagctcg cgcgccacga tggccgccgg caccaggccg ccgcgggtaa
    12301 tggcgacgca ggcctcgaac ggcccctcgc tgttgagccg ccaggccagc gcccggctgt
    12361 cgcgatggaa ctggtcccag ctgacgggga agctcttggt ccggggttcg ttcaacgggg
    12421 cctccatcgg gctcaatagg gatcgggttc gggcaggccg gcgcgcgcgt gctcggcgac
    12481 aaccatggcg tggacggccc tcgccgcctc ggcgagcccc gcctcgtcgg ccgaccgcag
    12541 caccagctcg gtcatcaccg tgccgtcgcc catgcgggga tagctgccca tcttgacgtc
    12601 cggatattgc agctggagcg cggccagcgg gccaccgata ttgccctcgc ccacccggca
    12661 ccggatggtg acggactgca ccttgcggcc gccggtcagc gtcggcgcga tggcctcgag
    12721 catggcgcgc atgatcaccg gcacgccggc catgacgtgg acgttgccga tgcggaagcc
    12781 cggcgcggcg ctgacggaat tgacgatgag gctggcgccc tccggaatgc gcgccatccg
    12841 cagccgcgcc tcgttgggct cgatgccgcg atccgtccag cgcgcttcca gcatggcgcg
    12901 ggcctcgggg ttgatcggca gggcgacgcc gaacgctttg gcgatggcat cggcggtgat
    12961 gtcgtcatgc gtcgggccga tgccgccggt ggtaaacaca taggtgtagc gggcccgcac
    13021 ggcgttcacc gcggcgacga tgtcagcctc gatgtcggcg acgacccgca cctccatcag
    13081 gtcgatgccg aggtcggtgc agaactcggc cgtcgcgccg atgttcacgt ccctggtgcg
    13141 tccggacagg atttcgtcgc cgatgacgac gagcgcggca gtgggattgg cggtggtgga
    13201 catcgggcgg ccagcggatg caaagcgcat gcattgcgcg cgaacgggca aaggtcaacg
    13261 cccccggcgg ccattcccaa caaccgcggc atccgcggcc ttccaaatcg cccttcgagc
    13321 gactatttct cgtcttcagc ccacgagttg cccatgatca cctacgtcga tgccgaaacc
    13381 aagtcccgcc gcacctcggg ggtgatcccg ctgcatggcg aggccggatt tgccggcatg
    13441 cgcaaggccg ggcagctcac cggcgaggcg ctcgacctgc tggtcgagca cgtgaagccg
    13501 ggcgtcacca cggcggcgct cgacaagctg gcctatgatt tcgcgatgga ccaccaggcg
    13561 atcccggcga ccttgttcta caagggcttc cggcactcga tctgcacgtc gatcaaccac
    13621 gtggtctgcc acggcatgcc cgaggaccgg ccgctgcggg acggcgacat cgtcaatatc
    13681 gacctgacgc tcatcgtcga tggctggtat ggcgacagct cgcgcatgta cgcggtgggc
    13741 gagatttcgc gcaaggcgga gcggctgatc gaggtg
//
LOCUS       DATAZA010000418         3460 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3189329, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000418 DATAZA010000000
VERSION     DATAZA010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3460
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3189329"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..375
                     /locus_tag="VHZ56_10670"
     CDS             <1..375
                     /locus_tag="VHZ56_10670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012590281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HEX4298472.1"
                     /translation="TWAHHALIQGDRKGLRYGLMLTIALGLCFTCVQAIEYSRAGFSY
                     SGDIYGAAFFMATGFHGFHVVIGTIFLIVCLLRANAGQFTVRHHLGFEFAAWYWHFVD
                     VVWLFLFASIYVWGAWGVANLH"
     gene            498..1115
                     /locus_tag="VHZ56_10675"
     CDS             498..1115
                     /locus_tag="VHZ56_10675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006205225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEX4298473.1"
                     /translation="MTDHIIRDLAALEALYGEVSEVSALKEITYLHPHYAAFIKASPF
                     AVLATSGPSGLDASPRGDPAGFIAIADDKTLLVADRRGNNRIDSLRNILADPRVALLF
                     LVPGIGETLRVNGTAEISVDPELLARFAVAGKAPRSMLVVHIESVFFQCSRALIRSEL
                     WNPGKHISRSALPSTGEILAAVTQDRIDGQTYDRELPLRLKQTLY"
     gene            1120..1473
                     /locus_tag="VHZ56_10680"
     CDS             1120..1473
                     /locus_tag="VHZ56_10680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011666131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HEX4298474.1"
                     /translation="MSDSLVSPFAAGLACRCPRCGEGALFAGYLGLAPSCESCGLDYS
                     FADSGDGPAIFVIFAVAPIVVILAFIVDALFHPAPWMHLLLWIPTIVILCLLFLRPFK
                     ATMIALQYQRRAGAA"
     gene            1470..2237
                     /locus_tag="VHZ56_10685"
     CDS             1470..2237
                     /locus_tag="VHZ56_10685"
                     /inference="COORDINATES: protein motif:HMM:NF014193.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SURF1 family cytochrome oxidase biogenesis
                     protein"
                     /protein_id="HEX4298475.1"
                     /translation="MTTDAAAPSRRRLGPGFWGFIALMLALTVLWIALGVWQLQRLDW
                     KEGLIAEVSERMAAPPVPLPAAAQWPTLDLTNFSYRPVTVSGRYLGSGTILVFTSLSD
                     AKGEASGPGYWVMAPFVPDGGGTVFVNRGFVPQASGPQFAATPPPTGELTLAGIALDP
                     EPAGPFTPGPDTAGHIEWVRDPLRLAAMDRTAGPVFGMTIDAPAGAPGALPQGGETSV
                     DFPNNHFGYALTWFGFAILTPALLAYWVRRQLRPRQS"
     gene            2303..>3460
                     /gene="thrC"
                     /locus_tag="VHZ56_10690"
     CDS             2303..>3460
                     /gene="thrC"
                     /locus_tag="VHZ56_10690"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014284319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEX4298476.1"
                     /translation="MQFVSTRGEAPVLGFSDAVLSGLALDGGLYVPERWPQISGEEIA
                     AFAGRPYAEVAFDIISRFTGGEIADDKLRAILEAAYATFRHPSVTPLVELAPGRFVLE
                     LFHGPTLAFKDVAMQVLARLMDHILAERGARATVVGATSGDTGSAAIEAFRGRDTTDI
                     FILHPHGRTSDVQRRQMTTIADANVHNIAVAGTFDDCQAIVKGLFRNVAFRTDMHLGG
                     VNSINWGRIVAQIVYYFTAAVSLGAPHRPVSFVVPTGNFGDIFAGYAARRMGLPIANL
                     VIATNSNDILARTLETGIYETGAVVPTISPSMDIQVSSNFERLLFEALGRDAEAMKRL
                     MNSLQQSGRFTVPPKALAAIRESFAAGRASEAETSATIAQTFRQSGYLLDPH"
BASE COUNT          480 a         1298 c         1035 g          647 t
ORIGIN      
        1 acctgggccc accacgcgct catccagggc gatcgcaagg gcttgcgcta cggcctcatg
       61 ctgaccatcg ccctcggcct ctgcttcacc tgcgtccagg ccatcgagta ctcgcgcgcc
      121 ggcttctcct attccggcga catctacggc gccgccttct tcatggccac gggcttccac
      181 ggcttccatg tcgtcatcgg cacgatcttc ctgatcgtct gcctgctgcg cgccaacgcc
      241 ggccagttta ccgtcaggca tcacctcggc ttcgagttcg ccgcctggta ctggcacttc
      301 gtcgacgtgg tctggctgtt cctcttcgcc tcgatctacg tctggggcgc ctggggcgtc
      361 gccaacctcc actgacgcca aagtccatcg ggttgtgatg gggcgcggcg cgagctgcgc
      421 ccttgttgtt tgtgccaatg cgccccgcgt ggctccccct tggggaagcg accgtactct
      481 ccactccgga ggccagaatg accgaccaca tcatccgcga tctcgcggcg ctcgaagcgc
      541 tctatggcga ggtcagcgag gtctcggcgc tgaaggagat cacttacctc catccgcatt
      601 acgcggcctt catcaaggcc tcgccgttcg ccgtgctggc gacctccggc ccgagcggcc
      661 tcgatgccag cccgcgcggc gatccggcag gcttcatcgc gatcgccgac gacaagacgc
      721 tgctcgtcgc cgaccgccgc ggcaataacc gcatcgacag cctgcgcaac attctcgccg
      781 acccgcgcgt cgcgctgctg ttcctcgtgc cggggatcgg tgagacgctg cgggtcaacg
      841 gcactgctga aatttcggtc gacccggagc tgctcgcccg gtttgcggtc gccggcaagg
      901 cgccgcgcag catgctggtc gtccatatcg agagcgtctt cttccagtgc tcgcgggcgc
      961 tgatccgctc ggaactctgg aacccgggga aacacatctc acgctcggcg ctgccgtcca
     1021 ccggcgagat cctcgccgct gtgactcaag atcgcatcga cggccaaacc tatgatcggg
     1081 agttgccgct gcggctcaaa caaacgctat actgagccga tgtccgacag cctcgtctcg
     1141 ccgtttgccg caggtcttgc gtgtcgctgc ccgcgctgcg gggagggggc actgttcgcc
     1201 ggctatctcg ggctggcccc gtcctgcgaa agctgcggcc tcgactactc cttcgccgac
     1261 agcggtgacg gtccggcgat tttcgtgatt ttcgcggtcg cgccgatcgt cgtcatcctc
     1321 gccttcatcg tcgatgccct gttccatccg gcgccgtgga tgcatctgct gctgtggatc
     1381 ccgaccatcg tcatcctctg cctgctgttc ctgcggccgt tcaaggccac catgatcgcg
     1441 ctgcaatacc agcgccgggc cggcgcggcg tgaccaccga cgcggccgcg ccgtctcgcc
     1501 gccgtctcgg tcccggcttc tggggcttta tcgccctcat gctggcgctg accgtgctgt
     1561 ggatcgccct tggcgtctgg cagctgcagc ggctggactg gaaggaggga ctgatcgccg
     1621 aggtcagcga gcgcatggcc gcgccgccgg tgccgctgcc cgccgcggcg cagtggccga
     1681 ccctcgacct cacgaacttc tcctatcggc cggtcaccgt atcgggcaga tacctcggca
     1741 gcggcaccat cctggtgttc accagcctct ccgatgccaa gggcgaggcg tccggccccg
     1801 gctattgggt gatggcgccg ttcgtccccg acggcggcgg caccgtgttc gtcaatcgcg
     1861 gcttcgtccc gcaggcgtcc gggccccagt tcgcggcaac cccgccgcca accggcgaac
     1921 tgacgctcgc gggtattgcc ctcgatcccg agccggcagg accgttcacg cccggacccg
     1981 acacggcggg ccatatcgaa tgggtgcgtg acccgctgcg cctcgccgcc atggacagga
     2041 cggcggggcc ggtcttcggc atgaccatcg atgctcccgc cggcgccccc ggcgccctgc
     2101 cgcagggcgg cgagaccagc gtcgactttc ccaacaatca tttcggctat gccctgacct
     2161 ggttcggctt cgccatcctc accccggcgc tccttgccta ctgggtgcgg cgccagttgc
     2221 ggccgcggca gtcctgatcg gcttgctccg gcgcgccggt ttcactaggt tgcgccaact
     2281 tttcccaagg gcccttcacc cgatgcaatt cgtctcgacc cgcggcgagg cgccggttct
     2341 cggcttctcc gacgcggtgc tctccggcct tgccttggac ggcggcctct atgtgcccga
     2401 acgctggccg caaatctccg gcgaggagat cgccgcgttt gccggccgtc cctatgccga
     2461 ggtcgcgttc gacatcattt cccgcttcac cggcggtgag atcgccgacg acaagctccg
     2521 cgccatcctc gaggcagcct acgccacctt ccgccatccg tcggtgacgc cgctggtcga
     2581 gctcgcgccc ggccgcttcg tcctcgagct ctttcacggc ccgacgctcg ccttcaagga
     2641 cgtcgcgatg caggtcctgg cgcgcctgat ggaccacatc ctcgccgaac gcggcgcccg
     2701 cgccaccgtt gtcggcgcca cctccggcga taccgggtcg gcggccatcg aggcctttcg
     2761 cggccgcgat acgaccgaca tcttcatcct tcatccccac ggccgcacct ccgacgtgca
     2821 gcgccgccag atgacgacga tcgccgacgc caacgtccat aatatcgcgg tcgccggcac
     2881 cttcgatgac tgccaggcga tcgtgaaggg cctgttccgc aacgtcgctt tccggaccga
     2941 catgcacctg ggcggcgtca actcgatcaa ctggggccgc atcgtcgcgc agatagtcta
     3001 ttacttcacc gccgccgtct cgcttggtgc cccgcaccgg ccggtgagct tcgtcgtccc
     3061 caccggcaat tttggcgata tcttcgccgg ctacgccgcc aggcgcatgg gcctccccat
     3121 cgccaacctg gtgatcgcca ccaattccaa cgacatcctc gcccgcaccc tcgagaccgg
     3181 tatctacgag accggcgccg tggtccccac catcagcccc tcgatggaca tccaggtctc
     3241 gtccaatttc gagcggctgc tgttcgaggc cctcggccgc gatgccgagg ccatgaaacg
     3301 gctgatgaac agtctccagc agtccggccg cttcaccgtg ccgccgaagg cccttgcggc
     3361 gatccgcgag agcttcgcgg cgggccgcgc cagcgaggcc gagacctccg cgaccatcgc
     3421 gcagaccttc cggcaatccg gctatctgct tgatccgcat
//
LOCUS       DATAZA010000419         1770 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2261285, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000419 DATAZA010000000
VERSION     DATAZA010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2261285"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1770
                     /locus_tag="VHZ56_10695"
     CDS             <1..>1770
                     /locus_tag="VHZ56_10695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008875598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HEX4298477.1"
                     /translation="RAIRDNVLARANGDDSIQGGGSTITQQVAKNFLLNDQQTWDRKI
                     QEAILAVRIDSTFSKDKILELYLNEIFLGLNSYGVAAAALNYFDKALYELDLSEMAYI
                     AGLPKGPNNYQPFKHPQAAIDRRNYVLDQMLANGYISKPQHDQAEAESLNVTPRAAGS
                     QVYSAEYFTEEVRRQLESLYGEDQLYGGGLSVRTTLDPKLQDYARKALMDGLVSYDHN
                     TGFRGPVASVDLSGGDWGTAVATIDPLSDVPEWTLAVVLSTTATQDSIGLRPGDDVEG
                     KLLPDRVTGTLAAADSKWAGKKFTSLHVGDVVYVAPVDGKSGSYQIEQVPEIEGALVA
                     MDPRTGRVLAMVGGFSYAESEFNRATQALRQPGSAFKPIVYSAALDNGYTPASVVLDA
                     PIEVVNSDGTVWKPDNYEKDFLGPSTLRRGIELSRNVMTVRLAQDIGMPLIVDYAKMF
                     GIYDDLSPVLAMALGSGETTDLKMTSAYATIANGGRKIVPTLIDRVQDRYGKTIYRHD
                     ERVCDGCNATSWTNQPEPLIIDNREQVLDPMTAYQITSMMEGVVQRGTGTYAQKLNRP
                     VAGKTGTTNDSNDVWFIGFTPELV"
BASE COUNT          344 a          630 c          546 g          250 t
ORIGIN      
        1 ccgcgccatc cgcgacaacg tgctggcccg cgccaatggc gacgattcca tccagggcgg
       61 cggttcgacc atcacccagc aggtggccaa gaacttcctg ctcaacgacc agcagacctg
      121 ggaccgcaag atccaggaag cgatcctcgc ggtgcgcatc gacagcacct tctccaagga
      181 caagattcta gaactgtacc tcaacgaaat cttcctcggg ctgaactcct acggcgtcgc
      241 cgccgccgcg ctgaactact tcgacaaggc gctgtacgag ctcgacctga gcgagatggc
      301 ctacatcgcc ggcctgccca agggcccgaa caactaccag ccgttcaagc atccgcaggc
      361 cgcgatcgac cggcgcaact acgtgctcga ccagatgctg gccaatggct acatcagcaa
      421 gccgcagcac gaccaggccg aggcggaatc gctcaacgtc acgccgcgcg cggcgggcag
      481 ccaggtctat tcggccgagt atttcaccga ggaagtgcgc cgccagctcg agagcctcta
      541 tggcgaggac cagctctatg gcggcggcct ctcggtccgc accacgctcg accccaagct
      601 gcaggactac gcgcgcaagg cgctgatgga cggcctcgtc agctacgacc acaacaccgg
      661 cttccgcggg ccggtggcga gcgtcgacct gtccggcggc gactggggca ccgccgtggc
      721 gaccatcgat ccgctgagcg acgtgccgga atggacgctg gcggtggtgc tgagcacgac
      781 cgccacccag gattcgatcg gcctcaggcc cggcgacgac gtcgagggca agctgctgcc
      841 cgaccgcgtg accggcacgc tcgccgccgc cgacagcaaa tgggcgggca agaaattcac
      901 cagcctgcat gtcggcgacg tggtctatgt cgccccggtc gacggcaagt ccggcagcta
      961 ccagatcgag caggtgcccg agatcgaggg agccctcgtc gccatggacc cgcgcaccgg
     1021 ccgcgtgctg gcaatggtcg gcggcttttc ctacgccgag tccgagttca accgcgccac
     1081 ccaggcgctg cgccagccag gctcggcgtt caagccgatc gtctattcgg cggcactcga
     1141 caatggctac acgcccgcct cggtggtgct cgacgcgccg atcgaagtcg tcaactccga
     1201 cggcacggtg tggaagcccg acaactacga gaaggacttc ctcggcccga gcacgctgcg
     1261 gcgcggcatc gagctcagcc gcaacgtcat gaccgtgcgc ctggcgcagg acatcggcat
     1321 gccgctcatc gtcgactacg ccaagatgtt cggcatctac gacgatctgt cgccggtgct
     1381 ggcgatggcg ctcggctccg gggagaccac cgacctcaag atgacctcgg cctacgccac
     1441 catcgccaac ggcgggcgca agatcgtgcc gacgctgatc gaccgggtgc aggaccgcta
     1501 cggcaagacc atctaccgcc acgacgagcg ggtgtgcgac ggctgcaacg ccacctcctg
     1561 gaccaaccag cccgagccgc tgatcatcga caaccgcgag caggtgctcg atccgatgac
     1621 ggcctaccag atcacctcga tgatggaggg cgtggtgcag cgcggcaccg gcacctatgc
     1681 gcaaaagctc aaccggccgg tggccggcaa gaccggcacc accaacgatt ccaacgacgt
     1741 ctggttcatc ggcttcacgc ccgagctcgt
//
LOCUS       DATAZA010000420         4690 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_518543, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000420 DATAZA010000000
VERSION     DATAZA010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4690
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_518543"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..845)
                     /locus_tag="VHZ56_10700"
     CDS             complement(<1..845)
                     /locus_tag="VHZ56_10700"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HEX4298478.1"
                     /translation="MTGRPANPAEIEHFAAILRAGGLVAFPTETVYGLGADATNSDAV
                     LGIYEAKGRPRFNPLIVHVTDLAMARTLVEFSPLAERLARFWPGPLTLVLPRLGNAGL
                     SDIVTAGLDTVGIRIPDHPLALALIRAAGRPLAAPSANPSGKLSPTTAAQVRAAFRDR
                     IPVLDGGPSQSGVESTILAIDGDTVTQLRAGGLPRDEIEAALGQPVALAAPGSAIAAP
                     GMLASHYAPNATLRLDATAPEAGEAYLAFGPGQGTLNLSTTANLHEAARNLFAMLHQL
                     DETATR"
     gene            964..1887
                     /locus_tag="VHZ56_10705"
     CDS             964..1887
                     /locus_tag="VHZ56_10705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HEX4298479.1"
                     /translation="MTTLLVSQRNFESHVTPAGHPERPERIRVVEDALRPEVFPALWR
                     RDAPAGDLTLADVVHAPGYLQALAQVRPAEGLAQIDEDTFISSGSLDAAATALGGGLA
                     ALEAVALGEVENAFCAMRPPGHHAERERPMGFCLINTVAVLAREAQRKFGAERVAIVD
                     FDVHHGNGTEDIFFNDGSVFYGSSHQMPLFPGTGAMEETGVGNICNAPLAARSGTDDM
                     RAAYEERILPALRAFRPDFLLISAGFDADYRDPLAQLNWRPEDFSWVTLKLREAATAL
                     CGGRIVSVLEGGYDREGLATGVAAHVTALMG"
     gene            1891..2136
                     /locus_tag="VHZ56_10710"
     CDS             1891..2136
                     /locus_tag="VHZ56_10710"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEX4298480.1"
                     /translation="MAETGTDDVKAMSFETALAELESIVSRLEGGKAPLAESIAIYER
                     GEALKSHCEGLLKAAEARIEKITLRNGKPVGTEPLDP"
     gene            2149..2757
                     /locus_tag="VHZ56_10715"
     CDS             2149..2757
                     /locus_tag="VHZ56_10715"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEX4298481.1"
                     /translation="MAAAPRLIRFRIVLWALVVVAAIGATGLFFWQQSNGQLADGPIG
                     QKPFTLNSTKGGTFTEADLKGTPSLVFFGYTFCPDVCPTTLADIATWKQKLGLKAEQL
                     RTIFVTVDPGRDTQQVLSGYLGNFDADAIGLVGDATQTTAAKASFGVFSENQPPDKNG
                     NYLVNHTADVFLMDKDGKFQGTIDYGEDDAAALAKIKRLVAG"
     gene            2761..3501
                     /locus_tag="VHZ56_10720"
     CDS             2761..3501
                     /locus_tag="VHZ56_10720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HEX4298482.1"
                     /translation="MAERIRLDVALEQRGLVQSRARARDAIRRGTVSVNGSAASKPGA
                     LVGGDDAIVVDDPAGDYVSRAALKLIAGLDAGGIEVAGRTCLDLGASTGGFTQVLAER
                     GAATIYAVDVGHGQLSERVRALPGVVSLEGTNGRDLTRMTVPEAIDVLVCDVSFVSVT
                     KVLAAPLGLCGPGADAVILIKPQFEVGRAHIGKGGIVGDADAIAAAIDTVVGFVTALG
                     WVHRLSVASPIFGGDGNAETVALFRRVV"
     gene            3606..4598
                     /locus_tag="VHZ56_10725"
     CDS             3606..4598
                     /locus_tag="VHZ56_10725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003579096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX4298483.1"
                     /translation="MDYRRLGKSGLQVSEFSFGAWVTFGKQVGEDAAASIMGYAYDHG
                     VNFFDNAEGYEQGSAEVVMGEALKALKWPRDTYAVSSKVFWGGPKPTQTGLSRKHVTD
                     AAHGALKRLGVEYLDLYFCHRPDIDTPIEETVWAMHNLITQGKVLYWGTSEWSAQQIT
                     EAHLVARREHLTPPTMEQPQYNLFTRQKVEADYLPLYELGLGTTIWSPLASGLLTGKY
                     NDGIPADSRLNLPGYEWLKARLDTDKGKQEIAKIKQLASLAKEVGLPIHHMALLWCNA
                     NPHVSTVILGASKTSQLEDNLKALDSKAKMTPEVIAKIEAIMGNKPAGPERFRR"
BASE COUNT          772 a         1430 c         1766 g          722 t
ORIGIN      
        1 cgggtggcgg tttcgtcgag ctggtgcagc atggcgaaga ggttgcgggc ggcttcgtgg
       61 aggttggccg tggtcgagag gttcaacgtg ccctgccccg ggccgaaggc gaggtaggct
      121 tcgccggctt cgggagccgt ggcgtcgagg cggagcgtgg cgttgggggc gtagtggctg
      181 gcgagcatgc cgggggcggc gatggcgctg cccggggcgg cgagcgcgac cggctggccg
      241 agggcggcct cgatctcgtc gcgcggcagg ccgccggcac gaagctgggt gacggtgtcg
      301 ccgtcgatgg cgaggatggt ggattcaacg ccggactggc tcgggccgcc atcgaggacc
      361 gggatgcggt cgcggaaggc ggcgcgcacc tgtgccgcag tggtaggcga gagcttgccc
      421 gacggattgg cggacggcgc ggcgagcggc cggccggcgg cgcggatcag cgccagcgcc
      481 agcggatggt cggggatgcg gatgccgacg gtgtcgaggc cggcggtgac gatgtcgctg
      541 aggcctgcat ttcccagccg tggcagcacc agggtcagcg ggccgggcca gaagcgggcg
      601 aggcgttcgg ccagcggcga aaactcgacc agcgtgcgcg ccatcgccag atcggtgaca
      661 tggacgatca gcggattgaa gcgcgggcgg cccttggcct cgtagatgcc gagcaccgca
      721 tcggaattgg tggcgtcggc gccgaggccg tagaccgtct cggtgggaaa ggcgacgagg
      781 ccgccggcgc gcaggatcgc ggcaaagtgt tcgatctcgg cggggttcgc ggggcggccg
      841 gtcatggcgg ctgtttgaca agggcggctg cgggcgtcaa ggaatcagct cgagtggtcg
      901 cgttcgagtc cgcgagtggg cgagtcgtgt cgtgagacgc tcgagacggc ggaaatcgag
      961 gcgatgacca ctcttctcgt cagccagcgc aatttcgaga gccacgtcac cccggccggg
     1021 catccggaac ggccggagcg cattcgcgtg gtcgaggacg cactgcggcc ggaggtgttt
     1081 ccggcgctgt ggcggcggga cgcgccggcg ggcgacctga cgctggcgga cgtcgtgcat
     1141 gccccggggt acctgcaggc gctggcgcaa gtccggccgg ccgagggact ggcgcagatc
     1201 gacgaggaca cgttcatctc gtcggggtcg ctggacgccg ccgcgacggc actcggcggc
     1261 gggctcgcgg cgctcgaggc ggtggcgctg ggcgaggtcg agaacgcctt ctgcgccatg
     1321 cggccgcctg gccatcacgc cgagcgcgag cggccgatgg ggttctgcct catcaacacc
     1381 gtggcagtgc tggcgcgcga ggcgcaacgc aaattcgggg cggagcgggt ggccatcgtc
     1441 gatttcgacg tgcaccacgg caatggcacc gaggacatct ttttcaacga cggctcggtg
     1501 ttctacggct cgagccacca gatgccgctg tttccgggaa ccggcgcgat ggaggagacc
     1561 ggggtgggca acatctgcaa cgccccgctc gcggcgcggt cgggcaccga cgacatgcgg
     1621 gccgcatacg aggagcgcat cctgccggcg ctgcgagcgt tccggccgga tttcctgctg
     1681 atctcggccg gattcgacgc cgattatcgc gatccgctgg cgcagctcaa ctggcggccg
     1741 gaggattttt cctgggtgac gctgaagctg cgcgaagcgg cgacggcgct gtgcggcggg
     1801 cgcattgttt cggtgctcga aggcggttat gaccgcgaag ggctggcgac gggcgttgcc
     1861 gcccacgtca ccgcgctgat gggatagctc ttggccgaga ccggcaccga cgatgtgaag
     1921 gcgatgagct tcgagacggc cctggccgag ctcgagagca tcgtgtcgcg gctcgagggc
     1981 ggcaaggcgc cgctggccga atcgatcgcc atctacgagc gcggcgaggc gcttaagtcg
     2041 cattgcgagg ggctgctgaa agcggcagaa gcgcgcatcg aaaagatcac gttgcggaac
     2101 ggcaagcccg tggggaccga accgctcgat ccataagaga tttccgccat ggccgccgca
     2161 cctcgcctca ttcgcttccg catcgtgctg tgggcactgg tggtcgtggc agcgatcggg
     2221 gcgaccgggc tgttcttctg gcagcaatcc aacgggcaat tggcggacgg gccgatcggg
     2281 cagaagccgt tcacgctcaa ttcgaccaag ggcggcacgt tcaccgaggc cgacctcaag
     2341 gggacgccga gcctggtgtt cttcggctac acgttctgcc ccgatgtgtg cccgacgacg
     2401 ctggccgaca tcgcgacgtg gaagcagaag ctggggctca aggccgagca gctgcggacc
     2461 atcttcgtga cggtcgatcc ggggcgcgat acccagcagg tgctgagcgg ctatctcggc
     2521 aatttcgacg ccgacgcgat cgggctggtg ggcgacgcga cgcagacgac ggccgccaag
     2581 gcgtcgttcg gcgtgttctc cgagaaccag ccgcccgaca agaacggcaa ttatctcgtc
     2641 aaccacacgg ccgacgtgtt cctgatggac aaggacggca agttccaggg caccatcgac
     2701 tacggcgagg acgacgccgc cgcgctcgcc aagatcaagc ggctggtcgc cggctgagcg
     2761 atggccgagc gcatccggct cgacgtcgcg ctcgaacagc gggggctggt gcagagccgg
     2821 gcgcgggcgc gcgatgcgat ccgccgcggc acggtgtcgg tcaacggcag tgcggcgagc
     2881 aagcccgggg cgctggtcgg cggggatgac gcgatcgtgg tcgacgatcc ggccggcgac
     2941 tatgtctcgc gcgcggcgct gaagctgatc gcggggctgg acgcgggcgg catcgaggtc
     3001 gcgggacgaa cctgcctcga cctgggcgca tcgaccggtg gcttcacgca ggtgctggcc
     3061 gagcgcggcg cggcgacgat ctacgctgtc gacgtgggac acgggcagct gagcgagcgg
     3121 gtgcgggcgc tgccgggcgt ggtcagcctc gagggcacca acggccggga tctgacgcgc
     3181 atgacggtcc ccgaggcaat cgatgtcctc gtgtgcgatg tgagcttcgt atcggtgacc
     3241 aaggtgctgg ccgcgccgct cgggctctgc gggccgggcg cggatgcggt gatcctgatc
     3301 aagccgcagt tcgaggtcgg gcgcgcccat atcggcaagg gcggcatcgt cggcgatgcg
     3361 gatgcgatcg cggcggcgat cgataccgtc gtcggttttg tgacggcgct gggctgggtg
     3421 cacaggcttt cggtggcttc accgatattt gggggcgacg gcaacgcgga aacggtggcg
     3481 ctcttccgcc gggtggtcta gcatcggcaa gtgacgattg aagccaccat ggtggcgcta
     3541 ccctcccggg gcagttgccg atcgtctttg cgatttcaaa aagcacaaac tcaacaggtg
     3601 atgcgatgga ctaccgccgc ttgggcaaat ccggccttca ggtttccgaa ttttcgttcg
     3661 gcgcctgggt cacgttcggc aagcaggtcg gcgaggacgc ggccgcttcg atcatgggct
     3721 acgcctacga tcacggggtc aatttcttcg acaacgccga aggctacgag cagggcagcg
     3781 ccgaggtcgt gatgggcgag gcgctgaagg cgctgaagtg gccgcgcgac acctatgcgg
     3841 tgtcgtcgaa ggtgttctgg ggcggcccca agccgacgca gaccggcctg tcgcgcaagc
     3901 acgtgacgga tgccgcgcat ggggcgctga agcggctcgg ggtcgagtat ctcgacctct
     3961 atttctgcca ccggccggac atcgacacgc cgatcgagga gacggtgtgg gcgatgcaca
     4021 acctcatcac gcagggcaag gtgctgtact ggggcacgtc cgaatggagc gcgcagcaga
     4081 tcaccgaggc gcacctggtg gcgcggcgcg agcacctgac gccgccgacg atggagcagc
     4141 cgcaatacaa tttgttcacg cggcagaagg tcgaggcaga ctatctgccg ctgtacgagc
     4201 ttgggcttgg aacgacgatc tggtcgccgc tcgcgtcggg gctgctgacc ggcaagtaca
     4261 atgacggcat tcctgccgac agccggctca acctgccggg ctacgagtgg ctgaaggcgc
     4321 ggctcgacac cgacaagggc aagcaggaga tcgccaagat caagcagctg gccagtctcg
     4381 ccaaggaggt cgggctgccg atccaccaca tggcgctgct gtggtgcaac gccaacccgc
     4441 acgtctccac ggtgatcctc ggggccagca agacgagcca gctcgaggac aatctcaagg
     4501 cgctcgacag caaggcgaag atgaccccgg aggtgattgc caagatcgaa gcgatcatgg
     4561 gcaacaagcc ggccggaccc gagcgcttcc ggcgttagag tctctcctcc gctctggccg
     4621 accgatcccg agagggctcg ctcggccaac cgctagggac tttcctccgc tctggccgac
     4681 cgatcccgag
//
LOCUS       DATAZA010000421         3756 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_405518, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000421 DATAZA010000000
VERSION     DATAZA010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3756
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_405518"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..552)
                     /locus_tag="VHZ56_10730"
     CDS             complement(<1..552)
                     /locus_tag="VHZ56_10730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEX4298484.1"
                     /translation="MKRFVSVGECMIEMSGGEDGQYRLGYAGDTLNTAWYARARLGEG
                     WEVDYVTALGDDLYSQQMAQFFADNGIGTAHIFRIEGRRPGLYLIHQADGDRHFTYWR
                     GQSAARLMTEVPPALNAAFEGADFAYFSGISLAILSPRGRGRLLKAIHLARQAGARVA
                     FDPNERPALWSSLRVMGSTIAAAA"
     gene            complement(625..2142)
                     /locus_tag="VHZ56_10735"
     CDS             complement(625..2142)
                     /locus_tag="VHZ56_10735"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HEX4298485.1"
                     /translation="MRRTVAGIVLIAALAGTAGIVTTPAAADAVKLTIVGVGDIYAFE
                     GGKVRGGFARLNAVARAEKAANPNTLYLFDGDMISPSLLSGIDQGANTIELTNVVPFD
                     LAVPGNHEFDFGPSVFMDRVHQSKYPWAAINIEGPDGKPVDGLGHDIVYKEIAGLKVA
                     LVPVELDETVTLATTRNWIFEPTVATALDAAQQARDAGADIVIGVVHAAHEQDYAMQD
                     SHKFDLIVSGHDHDYRTGYDGITAYVETSTEANFLPIIDLNVDVETKDGKRTVSWTPN
                     FRFVDTATVTPDPETQAIVDQLKGKLSTDLDVQIGTSTGELDSRRADVRFEEATMGDL
                     VADALRTQTGADVAITNGGGIRGDKVYPAGTVLTRKDVFTELPFGNKTVVAEITGKAL
                     RDALENGFSEIGGGDGRFPQISGMTVVVDPSKTPGARVQSVSVGGKPLDPTATYKVAT
                     NDYMLGGGNSYTALGTGKVLVDASAAHLMASDVIDYVTAQKTVNVTLDGRITLLK"
     gene            2223..3041
                     /locus_tag="VHZ56_10740"
     CDS             2223..3041
                     /locus_tag="VHZ56_10740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298486.1"
                     /translation="MQLLVLGMHRAGTSAVTRIVNLMGAYFGPEGISAGYTADNPKGF
                     WERKDFMAFNRQILKERGCTWFKVDGWDAASRQPLPEALRASMKAAVLELDAHRPWVL
                     KDPRLCITLPEWLPLLEVPAAIIVSRDPLEIARSLQMRGDVPLAHGIALWEYYAVHTL
                     RAAAGMPRVFVRHDRLMSDPVAAAGELYRDLVEIETLGLRAPTRREILAFIDPALQRS
                     KPGPGAAGLTPVQQRLNAMLRGEEAFDPAVEVSPPSRAFMQALDASLGFSRQAG"
     gene            complement(3058..>3756)
                     /locus_tag="VHZ56_10745"
     CDS             complement(3058..>3756)
                     /locus_tag="VHZ56_10745"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013529684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEX4298487.1"
                     /translation="RAGVITDETTHTKKVIFHPLMMPKIVIADPELTVGMPGFITVGT
                     GFDALAHCLEAYCAPGYHPLADGIAVEGVRLVLENLPKVVADPRDIEARGHLMSAAAM
                     GATAFQKGLGAIHALSHPVGALYDTHHGMTNAVFMPYVLVVNRDAIEAKIARLAAYCG
                     MAPSFEAFLHAITALRSKLNVPNTLREFKVDGSKRELIGDMAIVDPTAGGNPVELTKA
                     RALEIFDRAMDGRV"
BASE COUNT          573 a         1293 c         1226 g          664 t
ORIGIN      
        1 cgctgccgcc gcgatagtgg agcccatgac gcggagcgaa ctccacagcg ccggccgctc
       61 gttcgggtcg aacgccacgc gtgctccagc ctgccgggcg agatggatcg ccttcagcag
      121 ccggccgcgg ccgcgtggcg agaggatggc gaggctgatg ccggagaaat aggcaaaatc
      181 ggcgccctcg aacgcggcat tgagggcagg gggaacctcc gtcatcagcc gcgcggccga
      241 ctgcccgcgc cagtaggtga agtgccggtc gccgtcggcc tggtggatga ggtagagccc
      301 gggccgtcgg ccctcgatcc ggaagatgtg cgccgtgccg atgccgttgt cggcgaagaa
      361 ctgcgccatc tgctgcgaat agaggtcgtc gccgagcgcc gtgacgtagt cgacctccca
      421 gccctcgccc agccgggcgc gcgcgtacca ggcggtgttg agcgtgtcgc cggcatagcc
      481 gaggcggtat tgcccgtcct cgccgcccga catctcgatc atgcactcgc cgacgctgac
      541 gaaccgcttc atggccgcct tatgccggtg atcggctgcg aaggaaaggg gcggcccacg
      601 ccgccctttg caccggtcgc cgccttactt gagcagcgtg attcgcccgt ccagcgtgac
      661 gttgaccgtc ttctgcgccg tgacgtagtc gatgacgtcc gaggccatca ggtgcgcggc
      721 ggaggcgtcg accagcacct tgccggtgcc gagcgcggtg taggaattgc cgccgcccag
      781 catgtagtcg ttggtcgcca ccttgtaggt cgccgtcgga tcgagcggct tgccgccgac
      841 gctgaccgat tgcacccggg cacccggcgt cttgctcggg tccaccacca ccgtcatccc
      901 cgagatctgc gggaagcgtc catcgccgcc gccgatttcg gagaagccgt tctcgagggc
      961 gtcgcgcagc gccttgccgg tgatttccgc aaccaccgtc ttgttgccga acggcagttc
     1021 ggtgaacacg tccttgcggg tcagcaccgt gccggcgggg taaaccttgt cgccgcggat
     1081 gccgccgcca ttggtgatcg cgacatcggc gccggtctgc gtccgcagcg catcggcgac
     1141 gagatcgccc atcgtcgcct cctcgaagcg cacatcggcg cgccggctgt cgagctcgcc
     1201 ggtgctggtg ccgatctgca cgtcgagatc ggtgctgagc ttgcccttga gctggtcgac
     1261 gatcgcctgc gtctcgggat cgggggtcac ggtcgcggtg tcgacgaacc ggaaattcgg
     1321 cgtccagctt accgtccgct tgccgtcctt ggtctcgacg tcgacgttga ggtcgatgat
     1381 cggcaggaaa ttggcctccg tggatgtctc gacgtaggcc gtgatgccgt cgtagccggt
     1441 gcggtaatcg tggtcgtggc cggagacgat gaggtcgaac ttgtgcgagt cctgcatcgc
     1501 atagtcctgt tcgtgcgccg catggaccac cccgatgacg atgtcggcac cggcgtcgcg
     1561 ggcctgctgc gctgcatcga gcgccgtggc gaccgtcggc tcgaagatcc agttcctggt
     1621 ggtcgccagc gtgacggtct cgtcgagctc gaccggcacc agtgccacct tgagcccggc
     1681 gatttccttg tagacgatgt cgtggcccag cccgtcgacc ggcttgccgt ccggcccctc
     1741 gatattgatc gccgcccatg ggtatttcga ctgatgcacc cggtccatga acaccgacgg
     1801 cccgaaatcg aactcgtggt tgcccggcac cgcgagatcg aacggcacca cattggtcag
     1861 ttcgatggta ttggccccct ggtcgatgcc cgacagcagc gacggcgaga tcatgtcgcc
     1921 gtcgaacaga tagagcgtgt tgggattggc ggccttctct gccctcgcca ccgcgttgag
     1981 ccgggcgaag ccgccccgca ccttgccgcc ctcgaaggca tagatgtcgc cgacgccgac
     2041 gatcgtcagc ttcaccgcat cggcggcagc cggtgttgtc acgatgccgg ctgttccggc
     2101 cagcgccgca atcagcacaa tccctgcaac agtgcgtctc atcgatctct ccgtggtccc
     2161 gccttcaccg tcgcgtgaac gcatctggtc agcaatcgca ttggcatagt ctcatgacaa
     2221 ccatgcagtt gcttgtcctc ggtatgcacc gggccggaac ctcggccgtc acccgcatcg
     2281 tcaacctgat gggggcctat ttcggccccg aaggcatttc cgccggctac accgccgaca
     2341 atccgaaggg cttctgggaa cgcaaggatt tcatggcgtt caaccgccag atcctcaagg
     2401 agcgcggctg tacctggttc aaggtcgacg gctgggacgc ggccagccgc cagccactgc
     2461 ccgaggcatt gcgcgccagc atgaaggcgg cggtgctcga gctcgacgcg catcgcccgt
     2521 gggtcctcaa ggatccgcgc ctctgcatca ccctgccgga atggctgccc ttgctcgagg
     2581 tgcctgccgc gatcatcgtc agccgcgatc cgctcgagat cgcgcgttcg ctgcagatgc
     2641 ggggcgatgt gccgctcgcg cacggcatcg ccctgtggga atactacgct gtccacacgc
     2701 tccgcgcggc cgccggcatg ccccgcgtct tcgtccggca cgaccggctg atgagcgatc
     2761 cggtggcggc agcgggcgag ctctaccgcg acctcgtcga gatcgagacg ctcggtctcc
     2821 gtgccccgac ccgccgcgag atcctggcct tcatcgatcc tgccctgcag cgctcgaagc
     2881 ccggacccgg cgccgcgggg ctgacgcccg tccagcaacg gctgaatgcc atgctgcgcg
     2941 gcgaagaggc gttcgacccc gcggtcgagg tgtcgccgcc aagccgggcc ttcatgcagg
     3001 cgctcgacgc ctcgctcggc ttctcccggc aggctggata ggtacccgca aaggcgccta
     3061 gacccgcccg tccatggcgc gatcgaaaat ctccagcgcc cgcgccttgg tcagttcgac
     3121 cggattgccg ccggccgtag gatcgacgat ggccatgtcg ccgatcagct cgcgcttgct
     3181 gccgtcgacc ttgaactcgc gcagcgtgtt gggcacgttg agcttgctgc gcagcgccgt
     3241 gatcgcatgc aggaacgcct cgaagctcgg cgccatgccg caataggccg cgagccgcgc
     3301 gatcttcgcc tcgatggcgt cgcggttgac caccagcaca tagggcatga acaccgcatt
     3361 ggtcatgccg tggtgcgtgt cgtacagcgc ccccaccgga tggctcagcg catggatggc
     3421 gccgaggccc ttctggaacg ccgtcgcacc catcgccgcg gcgctcatca ggtggccacg
     3481 cgcctcgatg tccctggggt cggcgacgac cttgggcaga ttctccagca ccagccgcac
     3541 gccttccacc gcaatgccgt cggccagcgg atggtatccg ggcgcgcaat acgcctcgag
     3601 gcaatgggcg agggcgtcga acccggtgcc gaccgtgatg aaccccggca tgcccaccgt
     3661 cagctcgggg tcggcgatga cgatcttcgg catcatcagc ggatggaaga tcaccttctt
     3721 ggtgtgtgtc gtctcgtcgg tgatgacccc ggcgcg
//
LOCUS       DATAZA010000422         1851 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1216550, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000422 DATAZA010000000
VERSION     DATAZA010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1216550"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..344)
                     /locus_tag="VHZ56_10750"
     CDS             complement(<1..344)
                     /locus_tag="VHZ56_10750"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX4298488.1"
                     /translation="MAKPLTLLTPSDREIVVSRDFDAPQHLVWDCYTRPDLIRRWYGL
                     PDWPMIVCEYDARIGGRWRFVSRGPNGFEMGSAGEIVEFVPPTRIVSTELYDMDWTGG
                     ATRNTLSFSHRAG"
     gene            complement(337..717)
                     /locus_tag="VHZ56_10755"
     CDS             complement(337..717)
                     /locus_tag="VHZ56_10755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018430445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX4298489.1"
                     /translation="MSPDQQLDATFIALADPTRRAILARLRRGDASVNELAQPFSISQ
                     PAISRHLKVLERAGLVTRSRDATRRPVRIAAGPLGEASGWLDDFRRFWEGSCQHLDAL
                     LVELQRDPPPEPQPAPPAEVPENG"
     gene            complement(793..>1851)
                     /locus_tag="VHZ56_10760"
     CDS             complement(793..>1851)
                     /locus_tag="VHZ56_10760"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX4298490.1"
                     /translation="SALAQKGADLGSAIANDVLGVMYQAGTNFKPDFSKAASYFKVAA
                     DKGYLRADARLCYLAADAEPVPFTASYDEIVRYCTLAATSGDALGEATLGYLYENGGY
                     GLQVDLTRAEYLYKEAADQNFVTAQVLLGALQYRGPKAQQDPAGAFALFQKAAARGYP
                     AGLRWLAIAYELGIGTPVDIPHAGQLYDQAGAANDVVAAFLLGYKVADGTPATAIVDN
                     ELNRFGDAPTDPVGLRILGQLFERGFNRTMDVAQAVATYQRCAGTNALCQFILGSYFK
                     YRAPTADLVAAARLYQQGAAAGEMHSQFELGYMYETGEGEPKDLQKAAALYTAAAQQG
                     NGVARDRLAHLNSGSASP"
BASE COUNT          283 a          546 c          731 g          291 t
ORIGIN      
        1 ccggcgcgat gcgaaaagct cagggtgttg cgggtggcgc cgccggtcca gtccatatcg
       61 tagagctcgg tcgagacgat ccgggtgggc ggcacgaact cgacgatctc gcccgccgat
      121 cccatctcga agccgttagg accgcggctg acgaaacgcc agcggccacc gatgcgggcg
      181 tcgtattcgc agacgatcat cggccagtcg ggcaggccgt accagcggcg gatcaggtcg
      241 ggccgggtgt agcagtccca gaccaggtgc tgcggcgcat cgaagtcgcg gctgacgacg
      301 atctcacgat cggacggcgt gaggagggtg aggggcttag ccattttccg ggacctcggc
      361 cggcggggcc ggctgcggct cgggaggcgg atcccgctgc aactcgacca acagggcgtc
      421 gaggtgctgg cagctgccct cccagaaccg ccggaagtcg tcgagccagc cggaggcttc
      481 gccgagcggc ccggcggcga tgcgcaccgg gcggcgggtc gcgtcgcggc tgcgggtcac
      541 gaggccggca cgttccagga ccttgaggtg cctggaaatg gcgggctggc tgatcgagaa
      601 gggctgcgcg agctcgttga ccgacgcgtc gccgcgccgc aagcgagcga ggatggcccg
      661 gcgcgtgggg tcggcgaggg cgatgaaggt ggcgtcgagc tgctggtcgg gcgacatttg
      721 ataaccggat tgttatagaa caatttggtt atgaagtgga tgcgcgccgc ggtcaagcgg
      781 aaatttcgtc gatcagggag aggcggagcc ggagttgagg tgggcgagac ggtcgcgggc
      841 gacgccgttg ccctgctgcg cggctgcggt gtagagcgcg gcggccttct gcaggtcctt
      901 gggctcgccc tcgccggttt cgtacatgta gccgagctcg aactggctgt gcatctcgcc
      961 ggcggcggcg ccctgctggt agaggcgggc ggcggccacg aggtcggcgg tgggggcgcg
     1021 atatttgaag tacgacccga ggatgaactg gcagagcgca ttggtgccgg cgcagcgctg
     1081 gtaggtggcg accgcctggg cgacatccat ggtgcggttg aagccgcgct cgaacagctg
     1141 gccgaggatg cgcaggccga ccggatcggt tggcgcatcg ccgaagcgat tgagctcatt
     1201 gtcgacgatg gcggtggccg gggtgccgtc ggcgaccttg tagccgagga ggaaggcagc
     1261 gacgacgtcg ttggcggcgc cggcctggtc gtagagctgg ccggcgtgag gaatgtcgac
     1321 cggcgtaccg atgccgagct cgtaggcgat ggcgagccag cgcaggccgg cggggtagcc
     1381 gcgggcggcg gctttctgga acagggcaaa agcgccggcg gggtcctgct gcgccttcgg
     1441 gccgcgatac tggagggcgc cgagcagcac ctgcgcggtg acgaagttct ggtccgcggc
     1501 ctccttgtac agatactcgg cccgggtgag gtcgacctgc aggccgtacc cgccgttttc
     1561 gtagagatag ccgagcgtcg cctcgccgag ggcatcgccg ctggtggcgg cgagcgtgca
     1621 gtagcgcacg atctcgtcgt agctggcggt gaacggcacc ggctcggcat cggcggcgag
     1681 gtagcagagg cgcgcgtcgg cgcggaggta gcccttgtcg gcggcgacct tgaagtaact
     1741 ggcggccttg ctgaagtccg gcttgaagtt ggtgcccgcc tgatacatca cgcccagaac
     1801 gtcgttcgcg atggcgctgc cgaggtcggc gcccttctgc gccagcgccg a
//
LOCUS       DATAZA010000423         1631 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2262812, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000423 DATAZA010000000
VERSION     DATAZA010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2262812"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..226
                     /locus_tag="VHZ56_10765"
     CDS             <1..226
                     /locus_tag="VHZ56_10765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014283929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="kynureninase"
                     /protein_id="HEX4298491.1"
                     /translation="TQVSLRHPEAYAVMQALIARGVIGDFRQPDILRFGLTPLYLRYV
                     DLHRAAEILGEVIADRSWDRPEYRQRAKVV"
     gene            complement(223..825)
                     /locus_tag="VHZ56_10770"
     CDS             complement(223..825)
                     /locus_tag="VHZ56_10770"
                     /EC_number="1.-.-.-"
                     /EC_number="1.6.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007758738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEX4298492.1"
                     /translation="MRVMVLHAHPVADSYNRALCDIVMETLRAGGHQPDLVDLYAENF
                     QPVLTREDRELYHHVPDNITPELKPYVDRLMAAEALVVVHPVWNYGYPAILKGYFDRV
                     FMPGVSFVLEGGDGPDKGKLKPNLKHIRKVAFVTSYGGDRWRTWLMGDPPRRNAKRWG
                     WVTFGGWLPPTYLALYDMNNVTRPQLEAFKDKVRRVIGRF"
     gene            complement(825..>1631)
                     /locus_tag="VHZ56_10775"
     CDS             complement(825..>1631)
                     /locus_tag="VHZ56_10775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEX4298493.1"
                     /translation="TNGIIVEAEVPLCEAHDWVDVMVGFDSIMQACAFGEQCARQDGM
                     LLKEIAPVASPVPFDWFNRHRPYIRHRDQSVVLIMAAPASLPALVDLSAFHKGDLLLR
                     GDLLPEEDKKKLPPIYELAWNHTTLRGLKLDPGITYLQTQYPDLEHVKWAIELFGDEM
                     PMHIEMTRFDGKIVFSGLPIVRYTSEARLEEIIRLHEANACLVFNPHRYTLEEGGMKR
                     TDRAQLDFKKHADPKGILNPGKMIAWDDPGFDFDSGRAWLFEGLKTLGAA"
BASE COUNT          267 a          527 c          539 g          298 t
ORIGIN      
        1 cacacaggtc tcgctgcgcc atcccgaggc ttacgcggtg atgcaggccc tgatcgcccg
       61 cggcgtcatc ggcgattttc gccagcccga tatccttcgc ttcggactga cgccgctcta
      121 tctgcgctat gtcgacctcc accgcgccgc cgaaatcctc ggcgaggtga tcgccgaccg
      181 cagctgggac cggccggaat atcgccagcg cgccaaggtc gtctagaagc gcccgatgac
      241 ccgccgcacc ttgtccttga aggcctcgag ctgcggccgg gtgacgttgt tcatgtcgta
      301 gagcgcgaga taggtgggcg gcagccagcc gccaaaggtg acccagcccc agcgcttcgc
      361 gttgcgccgc ggcggatcgc ccatcagcca ggtgcgccag cggtcgccgc cataggaggt
      421 cacgaacgcc accttcctga tgtgcttgag gttgggcttg agcttgccct tgtcgggccc
      481 gtcgccgccc tcgaggacga acgacacgcc cggcatgaag acgcggtcga aatagccctt
      541 gaggatcgcc ggatagccat agttccacac cgggtggacg acgacgagcg cttcggccgc
      601 catcagccgg tcgacatagg gcttgagctc gggcgtgatg ttgtcgggta cgtggtgata
      661 gagttcccgg tcctcgcgcg tcagcaccgg ctggaagttc tcggcgtaaa gatcgacgag
      721 gtccggctgg tggcccccgg cgcggagcgt ctccatgacg atgtcgcaga gcgcccggtt
      781 gtagctgtcc gcgaccggat gcgcgtgcag taccatgacc cgcatcaggc cgccccgaga
      841 gtcttcaggc cctcgaacag ccaggcccgg ccgctgtcga aatcgaagcc ggggtcatcc
      901 caggcgatca tcttgccggg attgaggatg cccttcgggt cggcatgctt cttgaagtcg
      961 agctgcgccc ggtcggtgcg cttcatgccg ccttcctcga gggtgtagcg gtgggggttg
     1021 aacaccaggc aggcattggc ctcgtgcagg cggatgatct cttcgagccg cgcttcgctc
     1081 gtgtagcgca cgatcggcag tccggaaaac acgatcttgc cgtcgaaccg cgtcatctcg
     1141 atgtgcatcg gcatctcgtc gccgaacagc tcgatcgccc atttgacgtg ctcgaggtcc
     1201 gggtattgcg tctgcagata ggtgatcccc ggatcgagct tgagaccgcg cagcgtcgtg
     1261 tggttccagg ccagctcgta gatcggcggc agcttcttct tgtcctcttc gggcagcagg
     1321 tctccgcgca gcagcaggtc gcccttgtgg aacgccgaga gatcgacgag cgcggggagg
     1381 gaggccggcg ctgccatgat cagcaccacc gactggtcgc gatgccggat gtacgggcgg
     1441 tggcggttga accagtcgaa cggcacgggc gaggcgaccg gagcaatctc cttgagcagc
     1501 atgccgtcct gccgggcgca ttgctcgccg aaggcgcagg cctgcatgat cgagtcgaac
     1561 ccgaccatca cgtcgaccca gtcatgcgct tcgcacagcg gcacttcggc ttcgacgatg
     1621 atgccgttgg t
//
LOCUS       DATAZA010000424         2460 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1334015, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000424 DATAZA010000000
VERSION     DATAZA010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2460
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1334015"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..396
                     /locus_tag="VHZ56_10780"
     CDS             <1..396
                     /locus_tag="VHZ56_10780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012066860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX4298494.1"
                     /translation="ALGETNSVAFMFDRVGAISYPLSAGDADKVMEAAIEAGADDVET
                     DEDEEEGGHTIYTSFENMMDAAAALEKSLGEPDSVKAVWRPQNNVPVDADKGGTLLKL
                     IGILEDDDDIQDIYANYEMSDEDLARLEA"
     gene            403..987
                     /locus_tag="VHZ56_10785"
     CDS             403..987
                     /locus_tag="VHZ56_10785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_function: GO:0015252 - proton channel activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HEX4298495.1"
                     /translation="MKKGRLEAFSDGVIAVIITIMVLELHAPHEASLSAVLEEAHPFF
                     AYVLSFVYVAIYWNNHHHMFQAVEHVNGQVLWANNLLLFTLSLVPFATNWMGETDFAL
                     VPTIVYGAVMLLPGVGYFVLARALVRLHGPDSTLARAMGRGVKEWASLVLYALGIAGA
                     FIHPYVAFVFYIAVAAMWFVPDRRIERQLDRSAG"
     gene            1068..1571
                     /gene="ruvC"
                     /locus_tag="VHZ56_10790"
     CDS             1068..1571
                     /gene="ruvC"
                     /locus_tag="VHZ56_10790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018899645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEX4298496.1"
                     /translation="MASMVRIIGIDPGLRRCGWGIIESDGSRLRYVACGTLTPRTDLS
                     LAERLATLHAGLRALIELHRPDEAAVEETFVNAGARSALQLGQARGVVLMTPAAMGLP
                     VGEYAANLVKKSVVGSGHAEKAQVQMMVKVLLPTADFEGADAADALAIAICHAHHRRA
                     AALRISA"
     gene            1568..2188
                     /gene="ruvA"
                     /locus_tag="VHZ56_10795"
     CDS             1568..2188
                     /gene="ruvA"
                     /locus_tag="VHZ56_10795"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEX4298497.1"
                     /translation="MIGKLKGLVDGFGDDHVHIDVGGVVYEAFCSSKTLAALPQVGHA
                     TVVHVEMIVREDMIRLYGFATPDEKAWFTTLMTVQGVGARVALSVLSTLSTGELASAI
                     ALQDKSMVGRASGVGPKLATRLVTELKGKVPTGIGIDAGTLGLQTALGEGRARSNVAD
                     AVSALSNLGYSSAQASAAVARVVGREGDGVETATLIRLGLRELSAS"
     gene            2185..>2460
                     /locus_tag="VHZ56_10800"
     CDS             2185..>2460
                     /locus_tag="VHZ56_10800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX4298498.1"
                     /translation="MTALTSAAAGPDDPLDVSLRPTGFAEFIGQGQARANLEVFIAAA
                     RQRQAALDHVLFVGPPGLGKTTLAQIVARELGVGFRATSGPVIAKAGD"
BASE COUNT          379 a          778 c          904 g          399 t
ORIGIN      
        1 gccctgggcg agaccaattc ggtcgccttc atgttcgacc gggtaggggc gatctcctat
       61 ccgctgtcgg cgggcgatgc ggacaaggtg atggaagcgg cgatcgaggc cggtgccgac
      121 gacgtcgaga ccgacgagga cgaggaggag ggcggccaca ccatctacac ctcgttcgag
      181 aacatgatgg acgcagccgc cgcgctcgaa aaaagcctgg gcgagccgga ttcggtgaag
      241 gccgtctggc ggccgcagaa caacgttcca gtcgatgccg acaagggcgg cacgctgctg
      301 aagctgatcg gcattctcga ggatgacgac gacatccagg atatctacgc caactacgag
      361 atgagcgacg aagacctggc gcgcctggag gcctgacgcc gcatgaagaa gggcaggctc
      421 gaggccttca gcgacggcgt catcgccgtg atcatcacga tcatggtgct cgagctgcat
      481 gcgccgcacg aggccagcct gtcggcggtg ctcgaggagg cgcacccgtt cttcgcctac
      541 gtgctgagct ttgtctacgt cgccatctac tggaacaacc accaccacat gttccaggcg
      601 gtggagcatg tgaacgggca ggtgctgtgg gccaacaacc tgctgctgtt caccctgtcg
      661 ctggtgccgt tcgcaaccaa ctggatgggc gagacggact tcgcgctggt cccgacgatc
      721 gtctatgggg cggtgatgct gctgcccggc gtcggctatt tcgtgctggc gcgtgccctg
      781 gtgcgcctgc acgggccgga ctcgacgctg gcccgtgcca tgggccgcgg cgtcaaggag
      841 tgggcgtcgc tggtgctcta tgcgctcggc atcgccgggg cgttcatcca tccctatgtt
      901 gccttcgtct tctacatagc ggtcgccgcg atgtggttcg tgccggaccg gcggatcgag
      961 cggcagctgg accggagcgc cgggtagccg gcgcacgatg tgggtaagtg ttgccggttt
     1021 gttcacatgg tccttggtag ccttctgccg ggcgtttaag caaaggcatg gcgagcatgg
     1081 tgcgaatcat cggcatcgat cccggtctgc gccgctgcgg ctgggggatc atcgagagcg
     1141 acggcagccg gctgcgctac gtcgcctgcg gcacgctgac gccgcgcacc gacctgtcgc
     1201 tggccgaacg gctcgccacg ctgcatgccg ggttgcgcgc tctgatcgag ttgcaccggc
     1261 ctgacgaggc ggcggtcgag gagacgttcg tcaacgccgg ggcgcgctcg gcgctgcagc
     1321 tcgggcaggc gcggggcgtg gtgctgatga cgccggcggc aatgggcctg ccggtcggcg
     1381 agtacgccgc caacctcgtc aagaagtcgg tggtgggttc gggacacgcc gagaaggcgc
     1441 aggtgcagat gatggtgaag gtcctgctgc cgacggccga tttcgagggc gccgacgcgg
     1501 ctgatgccct cgccatcgcc atctgccatg cgcatcaccg gcgcgccgcc gcgctcagga
     1561 tcagcgcatg atcggcaagc tcaaggggct ggtcgacggc tttggcgacg accacgtcca
     1621 catcgacgtc ggcggcgtcg tgtacgaggc attctgctcg tcgaagacgc tggcggcgct
     1681 gccgcaggtg gggcacgcga ccgtggtcca tgtcgagatg atcgtgcgcg aggacatgat
     1741 ccggctctac ggctttgcga cgccggacga gaaggcctgg ttcacgacgc tgatgacggt
     1801 gcagggggtg ggcgcgcgcg tcgcgctgtc ggtgctgtcg acactgagca ccggagagct
     1861 ggcgagcgcc atcgcgctgc aggacaagtc gatggtcggg cgcgccagcg gcgtcgggcc
     1921 caagctcgcg acgcggctcg tcaccgagct caagggcaag gtgcccaccg ggatcggcat
     1981 cgatgccggc acgctcgggc tgcagaccgc actgggcgaa gggcgggcgc gctcgaacgt
     2041 cgcggacgcg gtctcggcgc tcagcaatct cggctattcg agcgcccagg cgagcgccgc
     2101 cgtcgccagg gtcgtcggcc gcgagggcga cggcgtggag acggcgacgc tgatccggct
     2161 cgggctgcgg gagctgagtg catcatgacg gcgctgacct cggcggcggc cgggcccgac
     2221 gacccgctcg acgtgtcgct ccgtcccacc ggctttgccg agttcatcgg ccaggggcag
     2281 gcgcgggcca atctcgaagt gttcatcgcg gcggcccggc agcgccaggc ggcgctcgac
     2341 catgtgctgt tcgtcggccc gccggggctc ggcaagacga cgctggcgca gatcgtggcg
     2401 cgcgagctcg gcgtcggctt ccgcgccacc tcgggtccgg tgatcgccaa ggccggcgac
//
LOCUS       DATAZA010000425         1629 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1217337, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000425 DATAZA010000000
VERSION     DATAZA010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1217337"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1629)
                     /locus_tag="VHZ56_10805"
     CDS             complement(<1..>1629)
                     /locus_tag="VHZ56_10805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014893056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase-related protein"
                     /protein_id="HEX4298499.1"
                     /translation="VRQPILTNADLEKIRAIGAMEDNPFRSKTLDITYAAAEGAAGME
                     AALEDLFADAEIAVHAGDNIIILSDRMVGPDRIAIPALLATAGVHHHLIRKGLRTSVG
                     LVVETGDAREIHHFCALAGYGAEAINPYLAFETLLAMKPDLPEEVDEHEIVHRYIKAI
                     GKGILKVTAKMGISTYQSYCGAQIFDAIGLSSDFVSTYFTGTATTIEGAGLKEVAEET
                     VRRHDDAFGDSPVLEDALDIGGDYAFRFRGEAHMWRSETVSKLQHAARGNARDKYREF
                     ARLVNTVEDRYVTIRSLFRIKAADEDGRAAIPIEEVEPAAEIVRRFSTGAMSYGSISR
                     EAHTTLAIAMNRIGGKSNTGEGGEEVDRFKPLPNGDSMRSAIKQIASGRFGVTAEYLV
                     NSDMMQIKMAQGAKPGEGGQLPGHKVDRIIAAVRHSTPGVGLISPPPHHDIYSIEDLA
                     QLIFDLKNVNPAGMVSVKLVSEVGVGTVAAGVSKARADHVTISGYEGGTGAAPLTSLK
                     HAGSPWEIGLAETHQTLVANKLRGRIAVQVDGGIR"
BASE COUNT          233 a          511 c          593 g          292 t
ORIGIN      
        1 gcggatgccg ccgtcgacct gcaccgcgat gcggccgcgc agcttgttgg cgaccagcgt
       61 ctggtgggtt tcggcgaggc cgatctccca cggcgagccg gcatgcttca gcgaggtcag
      121 cggcgccgcg ccggtgccgc cctcgtagcc ggaaatcgtg acatggtcgg cgcgcgcctt
      181 gctgacgccg gcggcaacgg tgccgacgcc gacttccgag acgagcttga ccgacaccat
      241 gccggccggg ttgacgttct tcagatcgaa gatcagctgc gccaggtcct cgatcgagta
      301 aatgtcgtgg tgcggcggcg gcgagatcag gccaacgccg ggcgtcgagt ggcgcaccgc
      361 cgcgatgatc cggtcgacct tgtggccggg gagctggccg ccctcgccgg gcttggcccc
      421 ctgcgccatc ttgatctgca tcatgtcgga attgaccaga tattcggcgg tgacgccgaa
      481 gcggcccgag gcgatctgct tgatcgccga gcgcatggaa tcgccgttgg gcagcggctt
      541 gaagcgatcg acttcctcgc cgccctcgcc ggtgttggac ttgccgccga tacggttcat
      601 ggcgatggcg agcgtggtgt gcgcctcgcg cgagatcgag ccgtagctca tggctccggt
      661 cgagaaccgc ctgacgatct cggcggcggg ctcgacttcc tcgatcggga tggcggcgcg
      721 gccgtcctcg tcggccgcct tgatgcggaa cagcgagcgg atggtgacgt agcggtcttc
      781 gacggtgttc accagccggg cgaactcgcg gtacttgtcg cgggcgttgc cgcgcgccgc
      841 gtgctgcagc ttgctcactg tttcggagcg ccacatatgc gcctcgccgc ggaagcggaa
      901 ggcgtagtcg ccgccgatgt cgagcgcgtc ctcgagcacc gggctgtcgc cgaacgcgtc
      961 gtcgtggcgg cgcacggttt cctcggcgac ctccttgagg ccggcgccct cgatggtggt
     1021 ggccgtgccg gtgaagtagg tcgaaacgaa gtcggacgag agaccgatgg cgtcgaagat
     1081 ctgggcgccg caataggact ggtaggtcga gatgcccatc ttggcggtga ccttgaggat
     1141 gcccttgccg atcgccttga tgtagcggtg gacgatctcg tgctcgtcga cctcctcggg
     1201 caggtccggc ttcatggcga gcagcgtctc gaacgccagg taggggttga tcgcctcggc
     1261 gccgtagccg gcgagcgcgc agaaatgatg gatctcgcgg gcgtcgccgg tctcgacgac
     1321 gaggcccacc gaggtgcgca ggcccttgcg gatcaggtga tgatggacgc ctgccgtcgc
     1381 cagcagcgcc ggaatggcga tgcggtccgg cccgaccatg cggtcggaga ggatgatgat
     1441 gttgtcgccg gcatgcacgg cgatctcggc atccgcgaac aggtcctcga gcgcggcttc
     1501 catgccggcg gcgccttcgg ccgcggcgta ggtgatgtcg agcgtcttgg agcggaacgg
     1561 attgtcctcc atcgccccga tggcgcggat cttttcgaga tcggcgttgg tcaggatcgg
     1621 ctggcggac
//
LOCUS       DATAZA010000426        10574 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3191730, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000426 DATAZA010000000
VERSION     DATAZA010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 10574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10574
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3191730"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..435)
                     /locus_tag="VHZ56_10810"
     CDS             complement(<1..435)
                     /locus_tag="VHZ56_10810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298500.1"
                     /translation="MTKLSLLSLCLIGVSLPALAQDSTASSSQPTGAPGVTMSAPPDD
                     SSVSSDSSVSSDLPAPSDESSEPAGPPVSSKDALGDFFKICTDVASGAEGASDRATAD
                     GWAPEEPDGAGPYRTVFAGAKDFSGLGTVELWGSVESYPTQKL"
     gene            complement(468..1667)
                     /gene="sucC"
                     /locus_tag="VHZ56_10815"
     CDS             complement(468..1667)
                     /gene="sucC"
                     /locus_tag="VHZ56_10815"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012067154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEX4298501.1"
                     /translation="MNIHEHQAKALLKGYGLPVAPGVAIFSAAEAEAAAKSLPGPLYV
                     VKSQIHAGGRGKGKFKELGADAKGGVRLAKSPAEVASNAREMLGHTLVTKQTGPAGKV
                     VNRLYIEDGADIARELYCSLLVDRETGEVAFVVSTEGGMDIETVAHDTPERIVTVDIA
                     PKAGVTAANVASIASALQLEGAARADAATVFPALYKAFTETDMSLLEVNPLIVMKDGH
                     LRLLDAKVSFDNNALFRHPDLMALRDTSEEDAKEIEASKFDLAYVALDGNIGCMVNGA
                     GLAMATMDIIKLYGEQPANFLDVGGGASREKVTAAFKIITADPHVKGILVNIFGGIMR
                     CDVIAEGVVAAVREVGLKVPLVVRLEGTNVKEGKAILGSSGLDVIAADDLDDAAQKIV
                     KAIRTGH"
     gene            complement(1677..2639)
                     /gene="mdh"
                     /locus_tag="VHZ56_10820"
     CDS             complement(1677..2639)
                     /gene="mdh"
                     /locus_tag="VHZ56_10820"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013654949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEX4298502.1"
                     /translation="MARRKIALIGAGQIGGTLAHLVSMKELGDVVLFDIVDGVPQGKA
                     LDISQAGPVEGFNASVKGTSEYKDIAGADVVIVTAGVPRKPGMSRDDLLEINLKVMEQ
                     VGAGLAKYAPDAFVICITNPLDAMVWALQRFSGLPSSKVVGMAGVLDSARFRHFVAEE
                     LNVSVEDVSAFVLGGHGDSMVPLPRYSTVAGIPLTDLVKMGWLAKDKLDAIILRTRNG
                     GGEIVGLLKTGSAYYAPATSAIEMAESYLKDKKRILPAAAFLKGEYGVKGSYVGVPVV
                     IGAGGAERVVEISLNSAEQKAFDKSVGDVAALIEACKKIAPKLA"
     gene            complement(2723..3817)
                     /gene="zapE"
                     /locus_tag="VHZ56_10825"
     CDS             complement(2723..3817)
                     /gene="zapE"
                     /locus_tag="VHZ56_10825"
                     /inference="COORDINATES: protein motif:HMM:NF015902.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HEX4298503.1"
                     /translation="MSTPADPVSAALADLVQRGSISADPLQAEAARVLDGVAGDLAQN
                     GGGLFHRRKPVSGVYLVGDVGRGKTMLMDLFFAAVPIAEKRRAHFDAFMDEVHAAITA
                     FRATDTGRNRDPVAAVTRPIVAETRLLCLDEFQIGDITNAMLLGRLFEQLFAGGVTLV
                     ATSNTPPGELYRDGLNRQLVLPFIADLEAHVAVVPLDGPTDYRRLKFAGEAVFRFGTG
                     PDVAAAMDGLWRKLTRGVAGQPETLRSLGRDIAVPAAAMGAARFSFAALCEAPLGARD
                     YLRLAQRYDSLMLDGVPQFGRTNPSAAKRFTLLIDTLYDRGIKLAASFAVPLGQLAGD
                     MRNSVEFQRTLSRLAEMQSAAYLEAPRRPG"
     gene            complement(3918..4577)
                     /locus_tag="VHZ56_10830"
     CDS             complement(3918..4577)
                     /locus_tag="VHZ56_10830"
                     /inference="COORDINATES: protein motif:HMM:NF014968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AprI/Inh family metalloprotease inhibitor"
                     /protein_id="HEX4298504.1"
                     /translation="MRTRVFNIGTMSGMGKALGNRARGAAVVLSLGASLLLSACASTG
                     VTVANADTEQLAPVQGGTVSTSALPPIGPNGEVQGPTAAQPTGMAPADGNAPMQTADA
                     GGSIQTLPPPGSAPSSSGRDLSGGLTVEKLLGRWTVVSGSDQCSLNLTETAKAGTGRY
                     RASAPACALKGMTAVASWALAGTQVQLFDDKNNIIAALILSGNRFIGTLSGGQGISMV
                     G"
     gene            complement(4664..4888)
                     /locus_tag="VHZ56_10835"
     CDS             complement(4664..4888)
                     /locus_tag="VHZ56_10835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298505.1"
                     /translation="MFETIAHVADPALARVLIAALQAHGFHPMEGGQNGLPGLPGVVT
                     PRGIPIRVPDEEARDGKLLADDLLKDMQKR"
     gene            complement(4900..5694)
                     /locus_tag="VHZ56_10840"
     CDS             complement(4900..5694)
                     /locus_tag="VHZ56_10840"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (ubiquinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HEX4298506.1"
                     /translation="MVELTLPKNSQPTKGRTWPRPAGATRLREYRVYRYDPDSEANPR
                     IDTYFVDLDDCAPMVLDGLLYIKNKIDPTLTLRRSCREGVCGSCAMNIDGLNTLACTK
                     AMEDIRGAIRIYPLPHMPVVKDLVADLSTFYAQHRAIEPWLKTTTPTPKTEWLQSKPD
                     REKLDGLYECILCACCSTSCPSYWWNGEKYLGPAILLQAYRWLIDSRDQAQAERLDNL
                     EDPFKLYRCHTIMNCSKTCPKGLNPAKAIAEIKKMMVERKAAPAAA"
     gene            complement(5710..5964)
                     /locus_tag="VHZ56_10845"
     CDS             complement(5710..5964)
                     /locus_tag="VHZ56_10845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016733588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2164 domain-containing protein"
                     /protein_id="HEX4298507.1"
                     /translation="MKAIKFEKAERVAIVGRIQRYFADEMEQEIGSIPAEMLLNFFTE
                     TIGGYYYNKGLNDAQAVLARAQDSINDEIYALEQRDARAR"
     gene            complement(5975..6292)
                     /locus_tag="VHZ56_10850"
     CDS             complement(5975..6292)
                     /locus_tag="VHZ56_10850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298508.1"
                     /translation="MTKLLLLAAALALFAPAAYAASSPAPKGPPPTAAQKALFMKLCL
                     KNSGDNTTLCTCKQAQLDKLLDTQFMDVVLASMGGKVTPVEDTMPYAVYISKSNAVCA
                     PGM"
     gene            complement(6289..6729)
                     /locus_tag="VHZ56_10855"
     CDS             complement(6289..6729)
                     /locus_tag="VHZ56_10855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008873461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3052 domain-containing protein"
                     /protein_id="HEX4298509.1"
                     /translation="MSAAIAPAGYSGAPLPQKLGLKDGQRVLFIALPKELGELRGARQ
                     FSEIAEAGWDSFADGEPGYDLIHGFTASRAVLEAAARPLMQRIDRDGSIWISWPKQAS
                     KVKTDISGDVIRDIVLPIGLVDVKVAAVDDIWSGLKLMIRKELR"
     gene            complement(6743..7063)
                     /locus_tag="VHZ56_10860"
     CDS             complement(6743..7063)
                     /locus_tag="VHZ56_10860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298510.1"
                     /translation="MRHLLAAVLLIASVAASSTVFAAMTSQERTVFVQQCQKQMYESQ
                     AVCTCMAGIADKTLDDLDIQYLNLNALDPNHASAISKQMTQKELNAVDHFMSSAPDAC
                     RKPH"
     gene            complement(7076..8884)
                     /gene="sdhA"
                     /locus_tag="VHZ56_10865"
     CDS             complement(7076..8884)
                     /gene="sdhA"
                     /locus_tag="VHZ56_10865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010912303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HEX4298511.1"
                     /translation="MAAYDIIDHEFDVVVVGAGGAGLRATLGMAEQGFNTACVTKVFP
                     TRSHTVAAQGGIAASLKNMGPDSWQWHMYDTVKGSDWLGDNDAMEYLARNAPAAVYEL
                     EHYGVPFSRTDEGKIYQRPFGGHMTEFGEGPPVQRTCAAADRTGHAILHTLYGQSLRH
                     DAQFFIEYFALDLLMGDDGACQGILAWKLDDGTLHRFRAKITVLATGGYGRADFSATS
                     AHTCTGDGNGMVARAGLPLEDMEFVQFHPTGVYGAGVLITEGARGEGGYLTNSEGERF
                     MERYAPNAKDLASRDVVSRCMMLEIREGRGVGPKKDHIFLHLDHLDPKVLHERLPGIT
                     ESARIFAGVDLTREPIPVLPTVHYNMGGIPTNYHGEALNPTASDPDATVPGLMAVGEA
                     ACASVHGANRLGSNSLTDLVVFGRAAALRAGATMDRSKPVPSINKPAEDRIVARFDAL
                     RHASGGTPTAALRDRMQRTMQEDAAVFRTGESLRTGVARMHEVYAAQSDLHVTDRSMI
                     WNSDLVETLELENLLANALMTVVSAEARTESRGAHAREDFPSRDDANWRKHTISRIDA
                     AGKVSLSYRPVHTEPLTPESEGGISLKRIAPKARVY"
     gene            complement(8888..9268)
                     /gene="sdhD"
                     /locus_tag="VHZ56_10870"
     CDS             complement(8888..9268)
                     /gene="sdhD"
                     /locus_tag="VHZ56_10870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045282 - plasma membrane succinate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HEX4298512.1"
                     /translation="MIDKATIANPTTHYGSPRAATRHFMTQRITAAFNVLFTIFFVWF
                     VVRLAGSGRADLVGLVRNPVVAIVLCLLIGNVCVHMRIGMNEVIEDYLEGPANHLARR
                     ANAVFAIAVAVATVLAVAKIVFWG"
     gene            complement(9265..9651)
                     /gene="sdhC"
                     /locus_tag="VHZ56_10875"
     CDS             complement(9265..9651)
                     /gene="sdhC"
                     /locus_tag="VHZ56_10875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045282 - plasma membrane succinate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HEX4298513.1"
                     /translation="MAARSRPLSPHLQVYRFTLTMANSIIQRGTGMAMYFGTLLIVLW
                     LGAAALGDGPLGLIDAIYGFWLVQVILFLASWALFHHMLGGVRHFIWDSGNLLDPVGR
                     EVITRIQFALSIVLTLGAWALFVWFR"
     gene            complement(9760..9981)
                     /locus_tag="VHZ56_10880"
     CDS             complement(9760..9981)
                     /locus_tag="VHZ56_10880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298514.1"
                     /translation="MHRIAIAALIAAAALVVDGDLGRPAFAEGPAVAAPAPAATLQPV
                     TGRSGKVLTLLMILEALRQSPAVLAAPKL"
     gene            10111..>10574
                     /locus_tag="VHZ56_10885"
     CDS             10111..>10574
                     /locus_tag="VHZ56_10885"
                     /inference="COORDINATES: protein motif:HMM:TIGR00052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX4298515.1"
                     /translation="MPDYLKPIEDTPLSHLFGRVEKHVFDYRRRNGEWQRLTRETYDS
                     GDGAAVLLCDPAAGEVVLIRQFRYPAFHRGEPAFLIEACAGKLEGDGPEACARREAVE
                     ETGYTVGRIEQAYDCFMSPGSVTERLTLFIGWIEGRPGGAGGGLVAEGEDIEV"
BASE COUNT         1629 a         3634 c         3584 g         1727 t
ORIGIN      
        1 gagcttctgc gtcggatagc tctcgaccga gccccagagc tcgaccgtcc ccagcccgga
       61 aaagtccttc gcgccggcga ataccgtgcg gtacgggccg gccccgtccg gctcttccgg
      121 cgcccagcca tcggccgtcg cacgatcgct ggcgccctcg gcgccgctcg cgacgtcggt
      181 gcagatcttg aagaaatcgc cgagcgcatc cttcgacgac accggcgggc cggccggctc
      241 ggacgattcg tccgacggcg ccggcaggtc cgacgacacc gaggagtccg acgagaccga
      301 ggaatcgtcg ggcggcgccg acatggtaac gcccggcgcg cccgtcggct gcgagctcga
      361 ggcggtgcta tcctgcgcca gggccggcag gctgacaccg atgaggcaaa gcgacagcag
      421 agacagtttc gtcatccagt cctcccttgc ccggttcggg cgcctgctca atgtccggtc
      481 cggatcgcct tgacgatctt ctgcgccgca tcgtcgaggt cgtcggcggc gatcacgtcg
      541 aggcccgacg agccgaggat ggccttgccc tccttgacgt tggtgccttc gagccgcacc
      601 accagcggca ccttgaggcc gacttcgcgc accgccgcca ccacgccttc ggcgatcacg
      661 tcgcagcgca tgatgccgcc gaagatgttg accaggatgc ctttgacgtg cgggtcggcg
      721 gtgatgatct tgaacgccgc cgtcaccttc tcgcgcgagg cgccgccgcc gacgtcgagg
      781 aaattggccg gctgctcgcc gtagagcttg atgatgtcca tggtggccat ggcgaggccg
      841 gcgccattga ccatgcagcc gatattgccg tcgagcgcca cataggcgag gtcgaacttc
      901 gacgcctcga tctccttggc atcctcttcc gaggtgtcgc gcagcgccat cagatccggg
      961 tgccggaaca gcgcgttgtt gtcgaagctg accttggcgt cgagcagccg caggtgcccg
     1021 tctttcatga cgatcagcgg gttgacctcg agcaggctca tgtcggtttc ggtgaaggcc
     1081 ttgtagagcg ccggaaacac cgtcgccgcg tcggcccgcg ccgccccttc gagctgcagc
     1141 gccgaggcga tgctggcgac attggcggcg gtcaccccgg ccttgggggc gatgtcgacg
     1201 gtgacgatcc gctccggcgt gtcgtgcgcc accgtctcga tgtccatgcc gccttcggtc
     1261 gagaccacga acgcgacctc gccggtttcg cggtcgacca gcagcgagca atagagctcg
     1321 cgggcgatgt cggcgccgtc ctcgatgtag agccggttga cgacctttcc ggccgggccg
     1381 gtctgcttgg tgaccagcgt gtggcccagc atctcgcggg cgttgctcgc gacctcggcc
     1441 ggcgacttcg ccagtcgcac cccgcccttg gcgtcggcgc cgagctcctt gaacttgccc
     1501 ttgccgcgcc cgccggcgtg gatctgcgac ttgaccacgt agagcggccc cggcagcgac
     1561 ttcgccgcgg cttccgcttc tgcggcgctg aagatggcga cgcccggcgc caccggcagg
     1621 ccgtagccct tgagcagtgc cttggcctga tgctcgtgga tgttcatggc ggatccctag
     1681 gccagcttcg gggcgatctt cttgcacgcc tcgatcagcg cggcgacgtc gccgaccgat
     1741 ttgtcgaagg ccttctgctc ggccgagttg agcgagatct cgaccacccg ctcggcgccg
     1801 ccggcgccga tcaccaccgg caccccgaca tagctgccct tgaccccgta ttcgcccttg
     1861 aggaaggcgg ccgccggcag gatgcgcttc ttgtccttga ggtagctctc ggccatctcg
     1921 atcgccgagg tggccggcgc gtaataggcc gagccggtct tcagcagccc gacgatctcg
     1981 ccgccgccat tgcgggtgcg caggatgatg gcgtcgagct tgtccttggc gagccagccc
     2041 atcttgacga ggtcggtgag cgggatgccg gcgacggtcg aatagcgcgg cagcggcacc
     2101 atcgaatcgc cgtgcccgcc gagcacgaac gcgctgacgt cctcgaccga gacgttgagt
     2161 tcctcggcga cgaaatgccg gaaccgggcg ctgtcgagca ccccggccat gccgaccacc
     2221 ttgctcgagg gcaggcccga aaagcgctgc agcgcccaga ccatcgcatc gagcgggttg
     2281 gtgatgcaga tgacgaacgc gtccggcgcg tatttggcga gcccggcgcc cacctgctcc
     2341 atcaccttga ggttgatctc gagcaggtcg tcgcggctca tcccgggctt gcgcggcacg
     2401 ccggcggtga cgatgacgac gtccgccccg gcgatgtcct tgtactcgga ggtgcccttg
     2461 accgaggcgt tgaagccttc caccgggccg gcctggctga tgtcgagcgc cttgccctgc
     2521 ggcacgccgt cgacgatgtc gaacagcacc acgtcgccca attccttcat cgacaccaga
     2581 tgcgccagag tgccgccaat ctgccccgca ccgatcagag cgatcttcct gcgcgccatg
     2641 agcccgaaat cctgaaactg gttggaattg gcgcccctat taaccctagt gccgggacag
     2701 gacaagggcg gctttcggag ggtcagcccg gccgccgggg cgcctccaga tacgccgccg
     2761 actgcatttc ggcgagccgc gacagggtgc gctggaactc gacggaattg cgcatgtcgc
     2821 cggccagctg cccgagcggc accgcgaagc tcgcggcgag cttgatgccg cggtcgtaga
     2881 gcgtgtcgat gagcagcgtg aagcgcttgg cggcgctcgg attggtgcgg ccgaactgcg
     2941 gcacgccatc gagcatcagg ctgtcatagc gctgcgcgag gcgcaggtag tcgcgggcgc
     3001 cgaggggagc ctcgcagagc gccgcgaacg aaaaccgcgc cgcccccatc gccgccgccg
     3061 gcacggcgat gtcgcgcccg agcgagcgca gcgtctcggg ctggccggcg acgccgcggg
     3121 tgagcttgcg ccagagcccg tccatcgccg cggcgacatc gggaccggtg ccgaagcgga
     3181 acaccgcctc gccggcgaat ttgagccgcc ggtagtcggt cggcccgtcg agcggcacga
     3241 cggcgacgtg cgcctcgaga tcggcgatga acggcagcac cagctgccgg ttgagcccgt
     3301 cgcggtagag ctcgccgggc ggcgtgttgg aggtggcgac cagcgtcacc ccgcccgcga
     3361 acagctgctc gaacagccgg cccagcagca tggcgttggt gatgtcgccg atctggaact
     3421 cgtcgaggca gagcagccgc gtctcggcga cgatcggccg ggtgaccgct gccaccggat
     3481 cgcggttgcg gccggtgtcc gtggcgcgga acgcggtgat cgccgcatgc acctcgtcca
     3541 tgaaggcatc gaaatgcgcc cgccgcttct cggcgatcgg cacggcggca aaaaacaggt
     3601 ccatcagcat ggtcttgccg cgccccacgt cgcccacgag gtagacgccg ctgaccggct
     3661 tccgccggtg gaacagcccg ccgccgttct gcgcaaggtc ccccgcaacg ccgtcgagca
     3721 cccgcgccgc ctcagcctgg agcggatcgg ccgaaatgct gccccgctgc acgagatcgg
     3781 caagggcggc ggacacggga tcggcgggcg tggacacacc ttgcctttag ctgagcctcg
     3841 accgcttggg aatcggctcg gcgccgccgg tcaaatccgc tcgagccggc ccaccgccgc
     3901 caagggccgg gcggggctca gcccaccatc gagatgccct ggccgccgct cagcgtgccg
     3961 atgaagcggt tgccgctgag gatcagcgcc gcgatgatgt tgttcttgtc gtcgaacagc
     4021 tgcacctgcg taccggccag cgcccagctg gcgacggcgg tcatcccctt gagcgcgcag
     4081 gccggtgccg aggcgcggta gcggccggtg ccggccttgg ccgtctcggt cagattgagc
     4141 gagcactggt cggaccccga gaccaccgtc cagcggccga gcagcttttc caccgtcagc
     4201 ccgccgctga ggtcgcggcc cgaactgctg ggcgcgctgc ccggcggcgg cagcgtctgg
     4261 atcgagccgc cggcatcggc ggtctgcatc ggagcgttgc cgtcggcggg cgccatgccg
     4321 gtcggctggg ccgcggtcgg cccctgcact tcgccattcg gcccgatcgg cggcagcgcc
     4381 gaggtcgaaa cggtgccgcc ctgcaccggc gccagctgct cggtgtcggc attggcgacg
     4441 gtcacgccgg tcgacgcgca ggccgacagc agcagcgacg ccccgaggct caagacgacc
     4501 gcggcgcccc gcgccctgtt cccgagagcc ttgcccatgc ccgacatcgt cccgatgttg
     4561 aaaactcgcg tgcgcatata cgccaatcgc tccggcccct caacgataag tcagcccatc
     4621 cacggtaaag atggccattc taggaccccg cggcccgcgg cccctagcgc ttctgcatgt
     4681 ccttgagcag gtcgtccgcc agcagcttgc cgtcgcgtgc ctcctcgtcc ggcacccgga
     4741 tcgggatgcc gcgcggcgtc accactcccg gcaggccggg caggccgttc tggccgccct
     4801 ccatcgggtg gaagccgtgc gcctgcagcg ccgcgatcag cacgcgggcc agcgccggat
     4861 cggcgacgtg ggcgatcgtt tcgaacacca aggcctcctt caggctgcag cgggggcggc
     4921 cttgcgctcc accatcatct tcttgatctc ggcgatcgct ttggccggat tgaggccctt
     4981 cgggcaggtc ttggaacaat tcatgatggt gtggcagcga tagagcttga acggatcctc
     5041 gaggttgtcg agccgttcgg cctgcgcctg gtcgcggctg tcgatcagcc agcgataggc
     5101 ctgcagcagg atcgccggcc cgagatattt ctcgccgttc caccagtagg acgggcacga
     5161 ggtcgagcag caggcgcaca ggatgcattc gtagagcccg tcgagcttct cgcggtcggg
     5221 cttcgactgc agccattcgg tcttgggggt cggcgtcgtc gtcttcagcc agggctcgat
     5281 cgcccggtgc tgggcgtaaa aggtgctgag gtccgccacc aaatccttga ccaccggcat
     5341 gtgcggcagc ggatagatgc ggatcgcgcc ccggatgtcc tccatcgcct tggtgcaggc
     5401 gagggtgttg aggccgtcga tgttcatggc gcacgagccg cacacccctt cgcggcagga
     5461 ccggcgcagc gtcagcgtcg ggtcgatctt gttcttgatg tagagcagcc cgtcgagcac
     5521 catcggcgcg caatcgtcga gatcgacgaa ataggtgtcg atccgcggat tggcctcgct
     5581 gtcggggtcg tagcggtaga cccggtattc gcgcagccgg gtggccccgg ccggcctggg
     5641 ccaggtcctg cccttcgtcg gctgcgagtt cttggggagc gtcagttcga ccatggccgg
     5701 ttccgtgtct cagcgcgccc gggcatcgcg ctgctcgagg gcatagattt catcgttgat
     5761 cgagtcctgg gcccgcgcca gcaccgcctg cgcgtcgttg agccccttgt tgtaataata
     5821 gccgccgatc gtctcggtga agaagttgag cagcatttcg gccgggatgc tgccgatctc
     5881 ctgctccatc tcgtcggcga aatagcgctg gatgcggccc acgatcgcca cccgctccgc
     5941 cttctcgaac ttgatcgcct tcaccgctgc ctgcctacat gcccggcgcg cagaccgcgt
     6001 tcgatttcga gatgtagacg gcgtagggca tggtgtcctc gaccggcgtc accttgccgc
     6061 ccatcgaggc cagcacgacg tccatgaact gggtatcgag cagcttgtcg agctgcgcct
     6121 gcttgcaggt gcacagcgtc gtgttgtcgc cggagttctt gaggcagagc ttcatgaaca
     6181 gcgccttctg cgcggcggtc ggcggcggcc ccttgggcgc cggcgaggac gcggcgtagg
     6241 cggccggcgc gaacagcgcc agcgcggcgg cgagcagcag cagttttgtc atctcaactc
     6301 cttgcggatc atcagcttga ggccggacca gatgtcatcg accgccgcga ccttgacgtc
     6361 aacgaggccg atcggcagca cgatatcgcg gatcacgtcc ccgctgatgt cggttttgac
     6421 cttgctcgcc tgtttcggcc aggaaatcca gatcgatccg tcgcggtcga tccgctgcat
     6481 cagcggccgc gccgctgcct cgagcacggc ccgcgacgcg gtgaagccgt ggatcaggtc
     6541 gtagcccggc tcgccgtcgg cgaagctgtc ccagccggcc tcggcgatct cgctgaactg
     6601 gcgcgcgccg cgcaactccc cgagctcctt cggcaacgca atgaacagca cccgctgccc
     6661 gtccttcagc cccagcttct gcggcagcgg cgcgccggaa tagccggcgg gggcgatggc
     6721 ggcgctcatc ccggtgacat gctcaatgtg gcttgcggca cgcatcgggg gcggagctca
     6781 tgaaatggtc gacggcgttg agctccttct gcgtcatctg cttggagatg gccgaagcgt
     6841 ggttggggtc gagcgcgttg aggttgaggt actggatgtc gagatcgtcg agcgtcttgt
     6901 cggcgatgcc ggccatgcag gtgcacaccg cctggctctc gtacatctgc ttctggcact
     6961 gctgcacgaa caccgtgcgc tcctgcgagg tcatcgccgc gaacacggtc gacgaggcgg
     7021 cgacgctggc gatcagcagc acggcggcga ggagatggcg catgaaaact ccgttctaat
     7081 agacccgcgc tttcggcgcg atccgcttca aggaaatgcc gccctcgctc tcgggcgtca
     7141 gcggctcggt gtgcaccggc cggtagctga gactgacctt gccggccgca tcgatccggc
     7201 tgatcgtgtg cttgcgccag ttggcgtcgt cgcggctggg gaagtcctcg cgcgcatggg
     7261 cgccgcggct ctcggtgcgc gcctcggccg acaccaccgt catcagcgcg ttggccaaga
     7321 ggttctcgag ctccagcgtc tcgaccagat cggagttcca gatcatcgag cggtcggtga
     7381 cgtgcaagtc ggactgcgcc gcgtagacct cgtgcatgcg ggcgacgccg gtgcggaggc
     7441 tctcgccggt gcggaacacc gccgcgtcct cctgcatggt ccgctgcatg cggtcgcgca
     7501 gcgccgcggt cggcgtgccg ccgctggcat ggcgcagcgc gtcgaagcgg gcgacgatcc
     7561 tgtcctcggc cggcttgttg atcgacggca ccggcttgct ccggtccatc gtcgccccgg
     7621 cgcgcagcgc cgcggcccgt ccgaacacca cgaggtcggt gagcgaattg gagcccagcc
     7681 ggttggcgcc atgcaccgag gcgcaggccg cctcgcccac cgccatcagg ccgggcacgg
     7741 tggcgtcggg gtcgctcgcc gtcgggttca gcgcctcgcc gtgatagttc gtcgggatgc
     7801 cgcccatgtt gtagtgcacc gtcggcagca ccgggatcgg ctcgcgcgtc aggtcgacgc
     7861 cggcgaaaat ccgcgcgctc tcggtgatgc cgggcagccg ctcgtgcagc accttcgggt
     7921 cgagatggtc gaggtggagg aagatgtggt ccttcttcgg cccgacgccg cgcccctcgc
     7981 ggatttcgag catcatgcag cggctcacca cgtcgcgcga cgccaggtcc ttggcgttgg
     8041 gcgcatagcg ctccatgaac cgctcgccct ccgaattggt gagatagccg ccctcgccgc
     8101 gcgcgccctc ggtgatcagc acgcccgcgc catagacgcc ggtgggatgg aactgcacga
     8161 actccatgtc ctcgagcggc agcccggcgc gcgccaccat gccgttgccg tcgccggtgc
     8221 aggtgtgcgc cgaggtcgcc gagaaatcgg cccgtccgta gccgcccgtc gccagaacgg
     8281 tgatcttggc gcggaaccgg tgcagcgtgc cgtcgtcgag cttccaggcg aggatgccct
     8341 ggcaggctcc gtcgtcgccc atcagcaggt cgagggcgaa atactcgatg aagaactgcg
     8401 cgtcgtgccg cagcgactgg ccgtagagcg tgtggaggat ggcgtggccg gtgcgatcgg
     8461 ccgccgcgca ggtgcgctgc accggcgggc cctcgccgaa ctcggtcatg tggccgccga
     8521 acggccgctg gtagatcttg ccctcgtcgg tgcggctgaa cggcacgccg taatgttcga
     8581 gctcgtacac cgccgccggg gcattgcgcg ccagatattc catggcgtcg ttgtcgccca
     8641 gccagtccga gcccttgacc gtgtcgtaca tgtgccactg ccaggaatcc ggccccatgt
     8701 tcttgaggct cgcggcaatg ccgccctgcg ccgccacggt gtgcgagcgg gtcggaaaca
     8761 ccttggtcac gcaggcggta ttgaagccct gctcggccat gcccagggtc gcccgcaggc
     8821 cggcgccgcc ggccccgacc accaccacgt cgaattcgtg atcgatgatg tcgtaggcgg
     8881 ccatgcacta accccagaac acgattttag cgacggcgag caccgtcgcc acggcaacgg
     8941 cgatggcgaa caccgcattg gcccgacgcg ccagatggtt ggcggggccc tcgagataat
     9001 cctcgatgac ctcgttcatg ccgatccgca tgtggacgca cacattgccg atcagcaggc
     9061 agagcacgat ggcgacgacc ggattgcgca ccagcccgac caggtcggcg cggccgctgc
     9121 cggcgagccg caccacgaac cacacgaaaa agatcgtgaa cagcacgttg aacgccgccg
     9181 tgatgcgctg cgtcatgaag tgccgcgtcg ccgcccgcgg cgagccgtaa tgcgtcgttg
     9241 gattggcgat ggtggccttg tcgatcatcg gaaccacacg aacagcgccc acgcccccag
     9301 cgtcaacacg atcgacagcg cgaactggat gcgcgtgatc acctcgcggc cgaccggatc
     9361 gagaagattg ccgctgtccc agatgaaatg ccggacgccg cccagcatgt ggtgaaacag
     9421 cgcccagctg gcgaggaaca ggatcacctg caccagccag aagccgtaga ttgcatcgat
     9481 caggcccagc gggccgtcgc ccagcgccgc cgcgccgagc cacagcacga tcagcagggt
     9541 gccgaaatac atcgccatgc cggtgccgcg ctggatgatg gaattggcca tcgtcagcgt
     9601 gaatcggtag acttgcaggt gcggggagag gggcctggag cgggctgcca tgaacgtctc
     9661 ggcggcgccg gcaggcaatc cgccggcacc agatggaagt gctggcagac ttctacgcgc
     9721 cgggtctcga aaaggcaaag cggaatgccc gccgccgggt cacagtttcg gtgccgcgag
     9781 aaccgccggc gactgtcgca gcgcctccag aatcatcagc agcgtcaaaa ccttgccgct
     9841 ccggcccgtg accggctgca gcgtcgccgc cggagccggg gccgcgacgg ccggcccttc
     9901 ggcgaaggcc ggtcgcccga ggtcgccgtc gacgacgagc gccgcggcgg cgatcagcgc
     9961 ggcaatggcg attcggtgca ttttcggacg gcctccgcgg caggacccgg ccatccctag
    10021 ggtaaacgcc gtgtaaacag gctgagtccg tcgttcagat tccgttcatc cgccggatgt
    10081 ggcagacgag ggcgtccaag gagccttgcc gtgcccgatt acctgaagcc gatcgaagac
    10141 acgccgctgt cccacctctt cgggcgcgtc gaaaagcacg tcttcgacta tcgccgccgc
    10201 aacggcgagt ggcagcgact gacccgcgag acctacgaca gcggcgacgg cgcggcggtg
    10261 ctgctctgcg acccggcggc cggcgaagtg gtgctgatcc gccagttccg ctatccggcc
    10321 ttccatcgcg gcgagccggc gttcctgatc gaggcctgcg ccggcaagct cgagggcgac
    10381 ggccccgaag cctgcgcccg ccgcgaggcg gtcgaggaaa ccggctacac ggtcggccgg
    10441 atcgaacagg cgtatgactg cttcatgagc ccgggctcgg tcaccgagcg gctcaccctg
    10501 ttcatcggct ggatcgaggg ccgtcccggc ggcgccgggg gtggcctcgt ggcggaaggc
    10561 gaggacatcg aggt
//
LOCUS       DATAZA010000427         1709 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2610720, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000427 DATAZA010000000
VERSION     DATAZA010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1709
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2610720"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(335..826)
                     /locus_tag="VHZ56_10890"
     CDS             complement(335..826)
                     /locus_tag="VHZ56_10890"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX4298516.1"
                     /translation="MSNDATRAGLLGEVAAEAPAHAAAAVRLNIAVANQLGLPHTDLQ
                     CVGLLTGGPAAPTQLAERLGLTAGAVTKVLDRLERGGYVHRSADPADRRRIVVTASPE
                     GLAEVSRPYVPIGEAFARRFAGYTNDELRTVLKFMRDGREVAEAEIDRIRGAGTPHAS
                     RPR"
     gene            919..>1709
                     /locus_tag="VHZ56_10895"
     CDS             919..>1709
                     /locus_tag="VHZ56_10895"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX4298517.1"
                     /translation="MTTISKALIIGGGIAGPTAAMALRKAGIDATVYEAHGPGAEHVG
                     AGFNIATNGLDALAAIGALEAAKGLGIPATRISMYNRKARLLGTVATGLPQPGAPDTT
                     TFKRGELFAALAGAAASRGITTEYHRRLVQVEQSDKSVTAHFADGTRASGDVLIGADG
                     VHSATRAYVDPDAPSPRYTGLVSFGGFGRNPGLPPEPGVWKMMFGRKAFFGWFVPDTT
                     QVWWFISVPMDKPLSREEILAEGTGAWVPRLTGLFAGDDVPAEPIV"
BASE COUNT          264 a          603 c          598 g          244 t
ORIGIN      
        1 agctgggcgc ccaccagcgg cgcgccggcc accacgccgg ccgccaatcc gccccacccg
       61 agcagccgcc gccggctgac acgtacggaa tccgagtcca tgatcacagt ccttcccgat
      121 cggcaaacct ggcgctgaca gtgatgcgcc gtggtcatgc ctcactgaag aagaaggctg
      181 ttgcggcggc gtccgcgttt cgtcacaccc gcgctacagc gaattcccgg cgtcaaggaa
      241 ctggcgcaag ccggtggcgc gatggtcctg ccgctgggtg attcgccagg cccaggccgc
      301 tgccctcgga gcgggccgag atggcgccgg ggcttcagcg cggtcgtgag gcgtgcgggg
      361 tgcccgcgcc gcggatgcgg tcgatctcgg cttcggcgac ctcgcggccg tcgcgcatga
      421 acttcagcac ggtgcgcagc tcgtcgttgg tatagccggc gaagcggcgg gcaaaggcct
      481 cgccgattgg gacgtagggg cggcttactt cggcgagacc ctccgggctg gccgtcacca
      541 cgatgcggcg gcggtcagcc gggtcggcgg agcggtgcac gtacccgccg cgttccagtc
      601 ggtcgaggac cttggtcacc gcgccggcgg tcaggccgag gcgctcagcc agttgcgtgg
      661 gtgcggccgg cccgccggtg agcaggccga cgcactgaag atcggtatgc gggaggccga
      721 gctggttggc gacggcgatg ttgagccgga cggccgcagc cgcatgggcg ggcgcctcgg
      781 ccgccacctc gcccagaagc ccggcccgcg tcgcgtcgtt tgacactttt cgtctctccc
      841 ctttatcgtc aatataactt tcccaaggaa actatatttt caggaaagca atttagccta
      901 caccgaagcg aggcagcagt gacaacgatc agcaaggcgc tcatcatcgg cggcggcatc
      961 gcggggccca ccgcagcgat ggcgctgcgc aaggccggca tcgacgcgac ggtctacgag
     1021 gcacacgggc cgggagccga gcacgtcggc gccggattca acatcgccac caacgggctc
     1081 gacgcgctcg cggcgatcgg cgcgctcgag gccgccaagg gcctgggcat cccggccacc
     1141 cgcatctcca tgtacaaccg caaagcacgg ctgctcggca cggtcgcgac aggcctgccg
     1201 cagccgggcg ccccggacac aaccacgttc aagcgcggcg agctgttcgc ggcgctcgcc
     1261 ggtgcggcgg ccagccgcgg catcacgacc gaataccacc ggcgcctggt ccaggtcgag
     1321 cagtcggaca agtcggtgac cgcgcatttc gccgacggca cgcgcgccag cggcgacgtc
     1381 ctgatcggcg cggacggcgt gcactcagcc acccgcgctt acgtcgaccc ggacgcgccg
     1441 tccccgcgct acaccggcct ggtctccttc ggcgggttcg gccgcaaccc gggcctgccg
     1501 cccgagccgg gagtgtggaa gatgatgttc ggccgcaagg cgttcttcgg ctggttcgtg
     1561 ccggacacca cgcaggtgtg gtggttcatc agcgtgccga tggataagcc gctcagccgc
     1621 gaggagatcc tcgccgaggg caccggcgcg tgggtaccgc ggctcaccgg cctgttcgcc
     1681 ggcgacgacg tcccggccga gccgatcgt
//
LOCUS       DATAZA010000428        10235 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2842296, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000428 DATAZA010000000
VERSION     DATAZA010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 10235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10235
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2842296"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1586)
                     /locus_tag="VHZ56_10900"
     CDS             complement(<1..1586)
                     /locus_tag="VHZ56_10900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020094574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HEX4298518.1"
                     /translation="MALATGFGHLEQGAARRPFGAFAGGPSAASPLRAAIRSAIRRPE
                     PECLPPLIAAATLDSAAAARVQATARRLVERLRAVGPSRGVQGMIHEYSLSSEEGVAL
                     MCLAEALLRIPDAGTRDALIRDKVARGDWRSHLGPERTLFVNAATWGLMITGQLTGAL
                     PEDGLARALGRLIARGGEPIVRVGVDMAMRLMGEQFVTGQTIAEALANSQRMERRGFS
                     YSYDMLGEAAATAADAARYRQSYRDAIAAIGAASAGRGPYAGPGISIKLSALHPRYRR
                     SQRDRVLAELLPVVRELALQAGGHDIGLNIDAEESDRLDLSLDLLEALCLDPALAGWN
                     GLGFVIQAYGKRCPFVVDWLVELARRSGHRLMVRLVKGAYWDSEIKQAQVDGLSDYPV
                     YTRKVHSDVCYLACARKLLAARAEIFPQFATHNAQTVAAIYEMAGPGFAPGDYEFQCL
                     HGMGEPLYGNVVGPANLDRPCRIYAPVGTHGTLLAYLVRRLLENGANSSFVNRIADPT
                     VSIDDLTADPVAVARAIVPLG"
     gene            1697..2158
                     /locus_tag="VHZ56_10905"
     CDS             1697..2158
                     /locus_tag="VHZ56_10905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HEX4298519.1"
                     /translation="MTTLDPIDRRILGELQRDGRITNAELAQRVGLPATSMSDRFRRL
                     IRQGYIAGFGARLDPHALGLGLLAFVEVSLDKTTPDIFERFAEAVRRAPEVLECHMVA
                     GGFDYLIKARLADMAAYRRFLGETLLALPGVRETRTYAVMEEVKNDGPLPL"
     gene            2281..4023
                     /locus_tag="VHZ56_10910"
     CDS             2281..4023
                     /locus_tag="VHZ56_10910"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4298520.1"
                     /translation="MARKRADAGEKTNLLAVLRPYWPWIALLVVLTVVANALNLVVPQ
                     FVGHAIDSIGSAGFSLGPLILQFVAVALGIFAFTYVQAIVQTLTSERVARDLRQRLVE
                     RISQQDFAYIQKVSPARLLTNLTSDIDAIKNFVSQAIASIASSLFLIVGASVLLLLLD
                     WQLALAVLAVVPVIAVTFYLVLSRVRKLFRKSQAAIDWLNKVINESILGSSLIRLVNS
                     QASEYQKFLAASGEALSIGLSIIRLFAGMIPTIIFLSNLATLVILAFGGHLVISGAMT
                     LGQFAAFNSYLAILIFPILIIGFMSNVVAQAQASYDRIAQVLNAPDPKPAGTLDVELR
                     GDIEVSRLSVRYGQRAALDEVSFVARALTRTAIIGPTAAGKTQLLYAMTGLIEPQGGQ
                     VSYDGLPLDSYDKQALHRQVALVFQDSVTFNLSLRENIAFSNTVDDHSLSKAIDTAEL
                     GDFVATLPQRLDTVISERGTSLSGGQKQRIMLARALALNPRVLLLDDFTARVDQRTER
                     KILGNVRRNYPGITLISVTQKIAPVEDYDQIILLMEGKILARGTHSELMHASPEYVQI
                     YKSQQSTEDYELQA"
     gene            4007..5764
                     /locus_tag="VHZ56_10915"
     CDS             4007..5764
                     /locus_tag="VHZ56_10915"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4298521.1"
                     /translation="MSYKLNTANASESREPIWTALARLLPLMKGEGRKIVIALAAILV
                     SSATALVAPLIIGHTVDSFIATKDYGGVALWSAILFGVYVIGLGSAYLQTRTMGGVGR
                     RILFNLRNSIFTKLQELPVAFFNQNRSGDLISRINNDTDKLNQFFAQALMQFLGNAFL
                     ITGAGILLLVLDFRLGGAALLPAVLVLIVTQLVSGWVKRANFRSLQTLGGLSGEIQES
                     LANFKVIVAFNRLDYFRTKFGEANQANYGASIRAGIASNIFIPIYGLAYNLGQLVVLA
                     YGIYLISTGNLTAGLLIGFLLYVNNFYNPLRQLASIWSSLQLALAGFDRISEVLALES
                     DMQIVPAAQTASQAVMAFDDVSFHYPDGAEVLKHVSFALERGKTYALVGPTGGGKTTT
                     ASLMARLYDPSAGTVLLNGKDIRAYTPEERAQKIGFILQEPLLFTGTVRDNILYGNSR
                     HAGLSDAELTRTLDEAGLSGLLQRFEAGLETAVSSSGDAMSLGQKQLIAFIRAALRDP
                     ELLILDEATANIDTVTEQLLEDILRRLPATTTRVIIAHRLNTIEGADAIFFVNGGTVT
                     PAGSMEHAVDMLLHGAMQS"
     gene            5845..7329
                     /locus_tag="VHZ56_10920"
     CDS             5845..7329
                     /locus_tag="VHZ56_10920"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HEX4298522.1"
                     /translation="MLFEAFKLVAGSVPGSNGIRVGGTTHAYDGLAERATRIASGLIG
                     LGVQRGDPVAILMGHSPEMFAFAQALFAIGAIAVPLDIRAGRSELERAARQCHIRAVL
                     ARADLLALATAIAESAGVVLPVIVDGDAGPASLGALERTPVGALPAIGAEDVALYLMS
                     SGSTGRPKVVVRTHGELLADSANSTPTFGYGPHDLLLNLLPAHHAFGFAMTLSHASLS
                     GASTLLWEDKQPLIAARGRLLQAIGAEGVTVLPGVPFLFDLFAGVTDPVDLSRLRLAY
                     SGAIALKRASFDGFYERFGIPIRQVLGTTETLVATFNDSADVQATWDSVGRVAGDTRI
                     EVLPAAESADPAVGELLISSSAVTKGYLDNPEANRDSFRNGGWLSGDLGRIDEDGHVY
                     IVGRKKLIVEVAGQKVDPIEIEDVLMAHPAVAEAVVVGIPDARTGEQRLKAFVVQRSE
                     ATAGSVVDFARARLAAHKVPYIVEFRDALPRSATGKVLRGKLVD"
     gene            complement(7340..7609)
                     /locus_tag="VHZ56_10925"
     CDS             complement(7340..7609)
                     /locus_tag="VHZ56_10925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0000036 - acyl carrier activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEX4298523.1"
                     /translation="MNFLREACPEEARPSLTEQTRLMEDGILDSFGVVRLIGFLEEQF
                     GIVVPDGDIGPDLLASGAELALYVESRRRSGDRRPVATVAQLAAE"
     gene            complement(7750..8559)
                     /locus_tag="VHZ56_10930"
     CDS             complement(7750..8559)
                     /locus_tag="VHZ56_10930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4298524.1"
                     /translation="MDQELRGKIAFVTGSGRGLGNVMAHKLAQMGADVVVHDLSWQES
                     GRFGEARTLGDVVEAIAATGVRSLGVTGNIGDRVAVDAMRAKIEGELGPVDILVNCAG
                     GDIGASGAKPVPNDLLGIPYEDIVALTNSNLIGTMLVTRAFVPQMARRGSGVVVNIGS
                     AAGHFGGSHGGIYATLKAAVLHYTRCLADELRDQGVRVNAVSPGPAKTARFQATRTVD
                     PVKMDSSGKSFDRYAEPDEIADAVCFLCSPRARFIHGQVLRVDGGLTLFPG"
     gene            8793..9689
                     /locus_tag="VHZ56_10935"
     CDS             8793..9689
                     /locus_tag="VHZ56_10935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018326637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298525.1"
                     /translation="MTLSREQLRAFLHLEEPSIALRDRREEARDGYVVEHLSFEIGPG
                     NVVRGLLTRPPGEARSAAVLYAHSHGDRHDIGASELLDGRDYLLSPWGPLLARSGYVA
                     LCIDMPSFGSQSAPTESAAAKALIWYGRSLIGRMLEQQMAALTYLSSRDDVDAARIGG
                     FGISLGSTLSYWQAAVDTRLRAIAHLCCFADYATLVELGAHDHHGIYLLVPGLLNETS
                     TGRIAGLVAPRPQLICVGRLDELTPPLSVERALAETREMYRDADAAEALSFFEEPGAG
                     HQETPEMRSRVLAHFARHLRMQ"
     gene            9697..>10235
                     /locus_tag="VHZ56_10940"
     CDS             9697..>10235
                     /locus_tag="VHZ56_10940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4298526.1"
                     /translation="MKYAIVGAGSRHVMYREALAGHPVSADNELVALCDVNEARLALS
                     ASKLPEPRGNGIALYDAGEFDRMIAEQRPDRIVVTTPDDLHDEYIVRALRAGCDVVTE
                     KPMTIDLTRLKAILDAQRETGRAVAVTFNYRYNPAHTQLKRLLEDGVIGRVLAVDFDW
                     HLDRVHGADYFRRWHRDKA"
BASE COUNT         1605 a         3415 c         3572 g         1643 t
ORIGIN      
        1 ccgagcggca cgatggcacg ggcgaccgcc accggatcgg cggtcagatc gtcgatgctc
       61 accgtcgggt cggcgatgcg gttgacgaag gaactgttgg ccccgttctc gagcagccgg
      121 cgcacgagat aagcgagcag cgtgccgtgc gtgccgaccg gcgcatagat gcggcagggc
      181 cggtcgagat tggcaggccc gaccacgttg ccatagagcg gctcgcccat gccatggagg
      241 cactggaact cgtagtcgcc cggggcgaaa ccgggcccgg ccatctcgta gatggcggcg
      301 acggtctggg cattgtgggt ggcgaattgc gggaagattt cggcacgcgc cgccagcagt
      361 ttccgggcgc aggcgaggta gcagacgtcg gagtggacct tgcgcgtata gaccggataa
      421 tcgctcagcc catcgacctg ggcctgtttg atctcgctgt cccagtaggc gcccttgacc
      481 aggcgcacca tcagccgatg gccgctgcgg cgcgccagct cgaccagcca gtcgacgacg
      541 aaggggcagc gcttgccgta ggcctggatg acgaaaccga gaccgttcca gccggcgagc
      601 gccggatcga ggcacaacgc ctcgagcagg tcgagcgaga ggtcgagccg gtcggattcc
      661 tcggcgtcga tgttgaggcc gatgtcgtgc cccccggcct gcagcgcgag ttcgcggacg
      721 accggcagca gttccgccag cacgcggtcg cgctgcgagc ggcggtagcg cgggtgaagc
      781 gccgaaagct tgatcgaaat cccggggccg gcatagggac cgcggccggc cgacgcggca
      841 ccgatggcgg caatcgcgtc gcgatacgac tggcgatagc gcgccgcgtc ggccgccgtc
      901 gccgcggcct cgccgagcat gtcgtaggaa taggaaaagc cgcggcgctc catgcgctgg
      961 ctgttggcga gcgcctcggc gatcgtctgg ccggtgacga actgctcgcc catcagccgc
     1021 atggccatgt cgacgccgac ccggacgatc ggctcgccgc cgcgggcgat gagccggccg
     1081 agggcgcggg ccagcccgtc ttcgggaagc gccccggtca gctggccggt gatcatcagg
     1141 ccccaggttg cggcgttgac gaagagcgtc cgttccggtc ccagatgcga gcgccagtcg
     1201 ccacgggcga ccttgtcgcg gatcagcgcg tcgcgggtgc cggcgtcggg aatgcgcagc
     1261 agcgcctcgg cgaggcacat cagcgccacg ccctcttcgc tggacagcga gtattcgtgg
     1321 atcatgccct gcacgccgcg gctgggcccg acggcccgca gccgctcgac cagccggcgc
     1381 gccgtcgcct gcacccgcgc ggcggcggcg gaatcgagcg tcgccgcggc gatcagcggc
     1441 ggcaggcatt cgggctcggg gcgacggatg gcggaacgaa ttgcggcccg gagtggcgac
     1501 gctgcagacg ggccgccggc gaaggcgccg aagggccggc gcgcagcccc ctgctccaga
     1561 tgaccgaaac cggtcgccag cgccatgtcg tctccccact ccgccggcga ctgtatcgcc
     1621 gattccccgt agtgccattg cgataattgt cacaatcccg taacttcacc gcattgctca
     1681 atcatatggc gcagatatga cgacattgga cccgatcgac cggcgcatcc tcggagagtt
     1741 gcagcgcgac ggtcgcatca ccaatgccga gctggcgcag cgggtcgggt tgccggcgac
     1801 gtcgatgagc gaccgcttcc ggcggctgat ccggcagggc tacatcgccg ggttcggcgc
     1861 ccggctcgac ccgcatgccc tggggctggg cctgctcgcc ttcgtcgagg tgtcgctcga
     1921 caagaccacg cccgacattt tcgagcgttt tgccgaggcg gtgcggcggg cgccggaggt
     1981 gctcgagtgc cacatggtgg ctggcggctt cgattatctg atcaaggcgc ggcttgccga
     2041 catggctgct taccggcggt ttctcgggga aacgctgctg gcgctgcccg gggtgcggga
     2101 aacccgcacc tatgcggtga tggaggaggt caagaatgac ggccccctgc ccctctgagc
     2161 ggctgacccg cgacctgtcc atcggcgcgc ttgcacgggt cgccctcggc gcctaagtgg
     2221 gcagggcgct gctctgggtg cgcagcccac cgccgacatg ctcgatttgc aggaggccgc
     2281 atggccagga aacgtgccga cgccggggag aaaaccaacc tcctcgccgt cctccgccca
     2341 tactggccgt ggatcgcgct gctggtcgtg ctcacggtgg tggccaatgc gctcaacctg
     2401 gtggtgccgc agttcgtcgg gcacgccatc gacagcattg gcagcgccgg cttcagcctg
     2461 gggccgctga tcctgcagtt cgtggcggtg gcgctgggca tcttcgcctt cacctacgtg
     2521 caggcgatcg tccagacgct cacctcggaa cgggtggcgc gcgacctgcg gcagcggctg
     2581 gtcgagcgta tctcgcagca ggatttcgcc tatatccaga aggtgtcgcc ggcccggctg
     2641 ctgaccaatc tcacctccga catcgatgcc atcaagaact tcgtgtcgca ggcgatcgcc
     2701 tcgatcgcct cgtcgctgtt cctcatcgtc ggggcgagcg tgctgctgct gctgctcgac
     2761 tggcaactgg ccctggcggt gctggcggtg gtgccggtga tcgccgtgac tttctatctg
     2821 gtgctgtcac gggtgcggaa gctgttccgc aagtcgcagg cggcgatcga ctggctgaac
     2881 aaggtgatca acgagtcgat cctgggctcc tcgctcatcc gcctcgtcaa ctcgcaggcc
     2941 tccgagtacc agaaattcct cgccgccagc ggcgaagcgc tcagcatcgg gctcagcatc
     3001 atccggctgt tcgccggcat gatcccgacc atcatcttcc tgagcaatct ggcgacgctg
     3061 gtgatcctcg ccttcggcgg ccacctcgtg atcagcggcg cgatgaccct gggccagttc
     3121 gcggcgttca actcgtacct ggcgatcctc atcttcccga tcctgatcat cggcttcatg
     3181 agcaacgtcg tggcgcaggc gcaggcctcg tacgaccgca tcgcgcaggt gctgaacgcg
     3241 cccgacccga agccggccgg aacgctcgac gtcgagctca ggggcgacat cgaggtgtcg
     3301 cggctgtcgg tgcgctacgg gcagcgggcg gcgctggacg aggtgagctt cgtcgcgcgc
     3361 gccctgaccc gcacggcgat catcgggccg accgcggccg gcaagacgca gctgctctat
     3421 gcgatgaccg ggctgatcga gccgcagggc ggccaggtga gctatgacgg cctgccgctc
     3481 gacagctacg acaagcaggc gctgcaccgc caggtggcgc tggtgttcca ggacagcgtc
     3541 accttcaacc tgtcgctgcg cgagaacatc gccttttcca ataccgtcga cgaccacagc
     3601 ctcagcaagg cgatcgacac cgccgagctc ggggatttcg tcgccaccct gccgcaaagg
     3661 ctcgacacgg tgatctcgga gcgcggcacg tcgctgtcgg gcgggcagaa gcagcgcatc
     3721 atgctggcgc gggctctggc gctcaatccg cgcgtgctgc tgctcgacga tttcacggcg
     3781 cgggtcgacc agcgcaccga gcgcaagatc ctcggcaatg tgcggcgcaa ctatccgggc
     3841 atcacgctga tctcggtgac gcagaagatc gcgccggtcg aggattacga ccagatcatc
     3901 ctcctgatgg aaggcaagat cctggcgcgg gggacgcaca gcgaactgat gcacgcctcg
     3961 cccgaatacg tgcagatcta caagtcgcag cagagcaccg aggactatga gctacaagct
     4021 taacaccgcc aacgcgagcg agagccgcga gccgatctgg acggcgctgg cgcgcctgct
     4081 gccgctgatg aagggcgaag gccgcaagat cgtcatcgcg ctggcggcga tcctcgtttc
     4141 gtcggcgacg gcgctggtcg cgccgctgat catcggccac acggtcgaca gtttcatcgc
     4201 caccaaggac tatggcgggg tggcgctgtg gagcgcgatc ctgtttggcg tctatgtcat
     4261 cgggctgggc tcggcctacc tgcagacgcg caccatgggc ggggtcggcc ggcgcatcct
     4321 gttcaacctg cgcaattcga tcttcaccaa gctgcaggaa ctgccggtcg cgttcttcaa
     4381 ccagaaccgg tcgggcgacc tgatctcgcg catcaacaac gacaccgaca agctcaacca
     4441 gttcttcgca caggcgctga tgcagttcct cggcaatgcg ttcctgatca ccggcgccgg
     4501 catcctgctg ctggtgctgg atttccggct gggcggcgcg gcgctgctgc cggcagtgct
     4561 ggtgctgatc gtcacgcagc tggtgtcggg ctgggtgaag cgcgccaatt tccgcagcct
     4621 gcagacgctg ggcgggctca gcggcgaaat ccaggagagc ctcgccaatt tcaaggtgat
     4681 cgtggccttc aaccggctcg attatttccg caccaagttc ggcgaggcca accaggcgaa
     4741 ctacggcgcc tcgatccgcg ccggcatcgc cagcaacatc ttcatcccga tctatgggct
     4801 cgcctacaac ctcgggcagc tggtggtgct ggcctacggc atctacctga tctcgaccgg
     4861 caacctgaca gccgggctgc tgatcggctt cctgctgtac gtcaacaatt tctacaaccc
     4921 gctgcggcag ctcgccagca tctggtcgtc gctgcagctg gcgctggccg ggttcgaccg
     4981 catctcggaa gtgctggcgc tcgagtccga catgcagatc gtgccggccg cgcagaccgc
     5041 gtcgcaggcg gtgatggcgt tcgatgatgt gtcgttccac tatccggatg gggccgaggt
     5101 gctgaagcat gtgagcttcg cgctggagcg cggcaagacc tatgccctgg tcggtccgac
     5161 gggaggcggc aagaccacca cggcgtcgct gatggcgcgg ctctacgacc ccagcgccgg
     5221 caccgtgctg ctcaacggca aggacatccg ggcctacacg cccgaggagc gggcgcagaa
     5281 gatcggcttc atcctgcagg agccgctgct gttcacgggc acggtgcgcg acaacatcct
     5341 ttacggcaac agccggcatg ccggcctgtc ggatgcggag ctgacgcgaa cgctcgacga
     5401 ggcgggcctg tcggggctgc tgcagcgctt cgaggccggg ctcgagaccg cggtgtcctc
     5461 gagcggggat gcgatgagcc tcggccagaa gcagctgatc gccttcatcc gcgccgcgct
     5521 gcgcgatccg gagctgctga tcctcgacga ggcgacggcc aacatcgaca cggtcaccga
     5581 gcagctgctg gaggacatcc tcaggcgcct gccggcgacg acgacgcggg tgatcattgc
     5641 gcaccggctc aacaccatcg aaggcgccga cgcgatcttc ttcgtcaatg gcggcacggt
     5701 gacaccggcc ggctcgatgg aacacgcggt cgacatgctg ctgcacggcg ccatgcaaag
     5761 ctgaccgaac ggcgttcggt acgcggctgt tgacgcgcgg catcccccct gaaatcctcc
     5821 gcctttgctc gggggagagg gtcgatgctg ttcgaggcat tcaagctggt cgccggcagc
     5881 gttcccggca gcaacggcat ccgggtcggg gggaccacgc acgcctatga cgggctggcc
     5941 gagcgcgcca cccgcatcgc gtccggcctg atcgggctcg gggtgcagcg cggcgacccg
     6001 gtggcgatcc tgatgggaca ttcgcccgaa atgttcgcct tcgcccaggc gctgttcgcg
     6061 atcggcgcca tcgccgtgcc gctcgatatc cgggcggggc gcagcgagct cgagcgcgcg
     6121 gcgcggcaat gccacatccg ggcagtgctg gcgcgggccg acctgctggc gctggccacg
     6181 gcgatcgccg agagcgccgg cgtcgtgctg ccggtgatcg tcgacgggga cgccgggccg
     6241 gcgagcctcg gggcgctgga gcgcaccccg gtgggggcct tgccggcaat cggcgccgag
     6301 gacgtggcgc tgtacctgat gtcgtcgggc tcgaccgggc ggccgaaagt ggtggtgcgc
     6361 acgcacgggg aactgctcgc cgacagtgcc aactcgacgc cgacgttcgg ctacgggccg
     6421 cacgatctgc tgctgaatct gcttccggcc caccacgcct tcggctttgc gatgacgctg
     6481 tcgcacgcct cgctcagcgg tgcctcgacg ctgctgtggg aggacaagca gccgctcatc
     6541 gcggcgcgcg gccggctgct gcaggcgatc ggcgccgagg gggtgacggt gctgccgggc
     6601 gtgccgttcc tgttcgacct cttcgccggg gtgaccgatc cggtggatct gtcgcggctg
     6661 cgcctcgcct attcgggcgc catcgcgctc aagcgcgcga gcttcgacgg cttttacgag
     6721 cgcttcggca ttccgatccg gcaggtgctc ggcaccaccg agacgctggt cgccaccttc
     6781 aacgacagtg cggacgtgca ggcgacgtgg gattcggtgg gccgggtggc gggcgatacg
     6841 cgcatcgaag tgctgccggc tgccgagagc gccgatccgg cggtgggcga actgctgatc
     6901 agctcgtcgg cagtgaccaa ggggtatctc gacaatcccg aggccaaccg ggactcgttc
     6961 cgcaatggcg gctggctcag cggcgacctc gggcgcatcg acgaggacgg ccacgtctat
     7021 atcgtggggc gcaagaagct gatcgtcgag gtggcgggcc agaaggtcga cccgatcgag
     7081 atcgaggatg tgctgatggc ccatccggcg gtcgccgagg cggtggtggt gggcatcccg
     7141 gatgcgcgca ccggcgagca gcggctcaag gcgttcgtgg tgcagcgatc ggaggcgacg
     7201 gcgggcagcg tggtggattt cgcgcgggcc cggctggcgg cgcacaaggt gccgtacatc
     7261 gtcgaattcc gcgatgcgct gccgcgcagc gccaccggca aggtgctgcg gggcaagctg
     7321 gtcgactgac ccggcggcgc tattcggcgg ccagctgcgc caccgtggcg accggccggc
     7381 gatcgcccga ccggcgccgg ctctcgacat aaagtgccag ctcggcaccc gatgccagca
     7441 ggtccggacc gatgtcgcca tcgggaacga cgatgccgaa ctgttcctcg agaaagccga
     7501 tcagccggac gacgccgaag gaatcgagga tgccgtcctc catcagccgg gtctgctcgg
     7561 tcaggctggg gcgcgcctct tccggacacg cctcccggag gaaattcata atcgcactgc
     7621 ggatatccgg catctgcgca ctcccctcac actccaccac cgggacgata ccggctgatc
     7681 ggcgaaaggg aaataggctt gatggaaagc ccggcgaggc ggggcggaga gcgccaacgc
     7741 cagtgccgtt cagcccggaa acagcgtcag cccgccatcg acgcgaagca cctgtccgtg
     7801 gatgaacctg gcccgcgggc tgcagaggaa gcacacggcg tcggcgattt catcgggctc
     7861 ggcgtagcgg tcgaaggatt tgccggacga atccattttc accggatcga cggtgcgggt
     7921 ggcctggaag cgggcggtct tggcgggtcc ggggctgacg gcgttgacgc gaacgccctg
     7981 gtcgcgcagc tcgtcggcga ggcagcgggt gtagtggagc acggcggcct tgagcgttgc
     8041 gtagatgccg ccatgcgagc cgccgaaatg cccggcggcc gagccgatat tgacgacgac
     8101 gccgctgccc cggcgggcca tctgcggcac gaaggcccgg gtcaccagca tggtgccgat
     8161 gaggttgctg ttggtcagcg ccacgatgtc ctcgtaggga atgcccagca ggtcgttggg
     8221 gacgggcttg gcgccggagg cgccgatatc gccgccggcg cagttgacga ggatgtcgac
     8281 cgggccgagc tcgccttcga tcttggcgcg catcgcgtcg acggcgacgc gatcgccgat
     8341 gttgccggtg acgccgagcg agcggacgcc ggtcgccgcg atggcctcga ccacgtcgcc
     8401 gagggtcctg gcttcaccga accggccgct ctcctgccag ctcaaatcgt ggacgacgac
     8461 gtcggcgccc atctgcgcga gcttgtgcgc catcacattg ccgaggccac ggcccgagcc
     8521 ggtgacgaag gcgatcttgc ccctgagttc ctggtccaac gctgcgatcc cttcccttgc
     8581 ccggtgtccg tgcgtgccgc ggctcttcac cggtggcgcc ggtgcggcgc cggccggcag
     8641 catagcgcca tcgggcgggt tctggcacga tgtgcgcgtt tcgggcgcgt ggcgatgccg
     8701 gttcaccgca ctggaccggt tggcgcgctg cggactggtt cttgcccgag ggacaaccgg
     8761 ctggaaagct gcagtgatag ccggcgagcc gcatgaccct ttcccgtgaa cagctcaggg
     8821 cgttcctcca cctcgaagag ccctcgatcg ccctgcggga ccgccgcgaa gaggcgcggg
     8881 atggttatgt cgtcgagcat ctgagtttcg agatcggccc gggcaatgtc gttcgcgggc
     8941 tgctgacgcg gccgcccggc gaggcgcggt ctgcggccgt gctctatgcg cattcgcacg
     9001 gcgaccgcca cgacatcggc gccagcgagt tgctggacgg ccgggattat ttgctgagcc
     9061 cgtgggggcc gttgctggcg cgcagcggct acgtcgcgct ctgcatcgac atgccgagct
     9121 tcggcagcca gagcgcgccg accgagagtg ccgccgccaa ggcgctgatc tggtacggcc
     9181 ggtcgctgat cggccggatg ctggagcagc agatggcggc gctgacctac ctcagctcgc
     9241 gggacgacgt cgacgcggcg cggatcggcg gcttcggcat ttcgctgggc tcgaccctca
     9301 gctactggca ggcggcggtc gacacgcggc tccgggccat cgcgcatctc tgctgctttg
     9361 ccgactacgc gacgctggtc gagctcgggg cgcatgacca tcacggcatc tacctgctgg
     9421 tgcccgggct gctgaacgag acctccaccg gccgcatcgc cggactggtg gcgccgcggc
     9481 cgcagctcat ctgcgtcggg cggctggacg agctgacgcc gccgctcagc gtcgagcggg
     9541 cgctcgccga gacccgggag atgtacaggg atgccgacgc cgctgaggcg ctgagctttt
     9601 tcgaggagcc cggcgccggg caccaggaaa cgccggagat gcggtcgcgc gtcctcgcgc
     9661 attttgcgcg ccaccttcgg atgcaatgag atgccggtga aatacgccat cgtcggtgcg
     9721 ggctcgcgtc acgtcatgta ccgcgaggcg ctcgccgggc acccggtctc ggccgacaat
     9781 gagctggtcg ccctctgcga cgtcaacgag gcgcgcctgg cgctctcggc gtcgaagctg
     9841 cccgagccgc gcggcaacgg catcgcgctc tacgacgccg gcgagttcga ccggatgatt
     9901 gccgagcagc ggccggaccg gatcgtggtg acgacccccg acgacctgca tgacgagtac
     9961 atcgtccggg cgcttcgcgc cggctgcgac gtggtgaccg aaaagccgat gacgatcgac
    10021 ctgacgcggc tgaaggccat cctcgacgcc cagcgggaga ccggccgcgc cgtcgccgtg
    10081 accttcaact accgctacaa tccggcgcac acgcagctga agcggctgct cgaagacggc
    10141 gtcatcggcc gcgtcctcgc cgtcgatttc gactggcacc tcgaccgcgt ccacggtgcc
    10201 gactatttcc gccgctggca ccgcgacaag gcgaa
//
LOCUS       DATAZA010000429         2397 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2263653, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000429 DATAZA010000000
VERSION     DATAZA010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2397
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2263653"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1389
                     /locus_tag="VHZ56_10945"
     CDS             <1..1389
                     /locus_tag="VHZ56_10945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018452889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     ATP-binding protein/permease"
                     /protein_id="HEX4298527.1"
                     /translation="GENGLPNVPKPEISIGSFDYVFDDPWRLYGLMAVLFFVGYVIAR
                     RIVASPFGHVLTAIRDNPARAQAVGHRTQSYKLSVFTIAAAYAGLAGGLEGVLQGYMS
                     PESFTFDTSGQLVMQTVIGGAGTLLGPLVGGALWLYLRNELQSALNLGAAWRLVLGVV
                     FVVLIMFLRRGIVGGIADLWHRLRPRPVAPPAETVPAHPVAATTVRRPPSSDRVAIET
                     RGLGKRYGGIVANEDIDFVVREGEIRGLIGPNGAGKSTFFKMLTGEVRPSSGQILMFG
                     EETTRLDVTAVCQRGVAKSYQINQLFSKLTVRRNLMISALSRTRGEFRLDLFRDVDHM
                     DELNADIDETLRMLNLTARADMAVSQLAYGEKRRLEIGLALGTNPRILLLDEPLAGMS
                     PQERADTVLLLKHLAIGRTMVVVEHDMDALFGMADRITVLTQGRVLTEGTPAEVQASA
                     AVQEAYLGGVPA"
     gene            1386..2084
                     /locus_tag="VHZ56_10950"
     CDS             1386..2084
                     /locus_tag="VHZ56_10950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018452888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4298528.1"
                     /translation="MSYLEVDRINSFYGDSHILFDVSMRVEKNEVVALLGRNGAGKST
                     TLKTLIGLVAAQSGSIRLDGRELARLRPHKVAGQGVQLVPEERRIFGSLSVEQNLVLS
                     RLTAKAAWPLDRVYELFPRLKERRGSRGTDLSGGEQQMLAIARALSRDPKVLLLDEPF
                     EGLAPIIVRDLLALCQRLAAEGQTIVIVEQNVAAALSIASRAYILNNGHVAFDGTSTE
                     LRESPAVLSRYLGV"
     gene            complement(2041..>2397)
                     /locus_tag="VHZ56_10955"
     CDS             complement(2041..>2397)
                     /locus_tag="VHZ56_10955"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEX4298529.1"
                     /translation="SNGTPGMLEPALQAAGLRSFLDRVISVDAVRRYKPAREAYALGL
                     QAFGGLPADILFVSSNGWDVAGAAWFGYGTFWINRAGAAVERLGVAPGEQGRSLADLV
                     AALKRPGSGSGPPATP"
BASE COUNT          386 a          786 c          858 g          367 t
ORIGIN      
        1 ggcgagaacg gcctgccgaa cgtgcccaag ccggaaatca gcatcggcag cttcgactat
       61 gtgttcgacg atccgtggcg gctgtacgga ctgatggcgg tgctgttctt tgtcggctac
      121 gtcatcgccc gccgcatcgt cgcctcgccg ttcggccacg tgctgaccgc cattcgcgac
      181 aacccggcgc gcgcccaggc cgtcggacac cggacgcagt cctacaagct gagcgttttc
      241 acgatcgcgg cggcctatgc cgggctggcc ggcggcctcg aaggggtgct gcagggctac
      301 atgtcgccgg aatccttcac cttcgatacc tccggacagc tggtgatgca gacggtgatc
      361 ggcggcgccg gtacgctgct cggcccgctg gtgggcgggg cgctctggct ttacctccgc
      421 aacgagctgc aatcggcgct caacctgggg gcggcgtggc ggctggtgct cggggtggtg
      481 ttcgtcgtgc tgatcatgtt cctgaggcgc ggcatcgtcg gcgggatcgc cgatctctgg
      541 caccggctgc ggccccgccc ggtggcgcca ccggccgaga ccgttccggc acaccctgtc
      601 gcagcgacga cggtgcggcg gcccccgagc agcgaccgcg tggcgatcga gacgcgcggg
      661 ctgggcaagc gctacggcgg catcgttgcc aacgaggata tcgacttcgt cgtgcgcgaa
      721 ggcgaaatcc gcgggcttat cggcccgaac ggggcgggca agagcacgtt cttcaagatg
      781 ctgaccggcg aggtccggcc gagttcgggg cagatcctga tgttcggcga agagacgacg
      841 cggctggacg tcaccgcggt ctgccagcgc ggcgtggcca agagctacca gatcaaccag
      901 ctgttctcga agctgacggt gcggcgcaac ctgatgatct cggcgctcag ccggacgcgc
      961 ggcgaattca ggctcgatct cttccgcgat gtcgaccaca tggacgaact caacgccgac
     1021 atcgacgaga ccttgcgcat gctcaacctc accgcccgtg ccgacatggc ggtgtcgcag
     1081 ctggcctatg gcgagaagcg ccggctcgag atcgggctcg cgctcggcac caatccgagg
     1141 atcctgctgc tcgacgagcc gctggccggc atgagcccgc aagagcgggc cgacaccgtg
     1201 ctgctgctca agcacctcgc gatcgggcgc acgatggtgg tggtggagca cgacatggac
     1261 gcgctgttcg gcatggccga ccggatcacg gtgctgaccc aggggcgggt gctgaccgag
     1321 ggtacgccgg ccgaagtgca ggcgagcgcc gcggtgcagg aggcctatct ggggggcgtt
     1381 cccgcatgag ctacctcgag gtcgaccgca tcaacagctt ttacggcgac tcccatatcc
     1441 tgttcgacgt ctcgatgcgg gtcgaaaaga acgaggtggt ggcgctgctc ggccgcaacg
     1501 gcgcgggcaa gagcacgacg ctcaagacgc tgatcggact ggtggcggcg caatcgggga
     1561 gcatccggct cgacggccgc gagctggcgc gcctgcgacc gcacaaggtc gccggccagg
     1621 gcgtgcagct ggtgcccgag gagcggcgca tcttcggcag cctcagcgtc gagcagaacc
     1681 tcgttctgtc ccggctgacg gcaaaggcag cgtggccgct ggatcgcgtc tatgagctgt
     1741 ttccgcgcct caaggagcgg cgcggcagtc gcggcaccga cctgtcgggc ggcgagcagc
     1801 agatgctcgc catcgcccgc gcgctcagcc gtgatcccaa ggtgctgctg ctggacgagc
     1861 cgttcgaggg gctggcgccg atcatcgtgc gcgacctgct ggcgttgtgc cagaggcttg
     1921 cggcggaggg gcagacgatc gtcatcgtcg agcagaatgt cgcggcggcg ctgtcgatcg
     1981 cgagccgggc ctatatcctc aacaacggcc acgtggcgtt cgacggcacg agcaccgaac
     2041 tcagggagtc gccggcggtc ctgagccgct acctgggcgt ttgagcgcgg cgaccaggtc
     2101 ggcaaggctg cggccctgct caccgggcgc gacccccagc cgttcgacgg ccgcgccggc
     2161 gcgattgatc cagaaggtgc cgtagccgaa ccaggccgcg ccggccacgt cccagccatt
     2221 ggaagagacg aacaggatat cggcaggcag gccaccgaac gcctgcaacc cgagcgcata
     2281 ggcctcgcgg gccggcttgt agcggcggac ggcatcgacg ctgatgacac gatcgaggaa
     2341 gctgcgcagg ccggctgcct gcagcgccgg ctcgagcatg ccgggcgtgc cgttgga
//
LOCUS       DATAZA010000430         5319 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_753996, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000430 DATAZA010000000
VERSION     DATAZA010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5319
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_753996"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..482)
                     /locus_tag="VHZ56_10960"
     CDS             complement(<1..482)
                     /locus_tag="VHZ56_10960"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130292.1"
                     /note="Conjugates Arg from its aminoacyl-tRNA to the
                     N-termini of proteins containing an N-terminal aspartate
                     or glutamate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HEX4298530.1"
                     /translation="MTDQTPENTQLFLTAPMPCPYLPGHQERKLFTHLTGRRASALHA
                     LLSDNGFRRSQNLIYRPACEGCAACQSVRILAREFETNARYRRILKQNADIEVAVRTP
                     RATAEQFALFKRYLDTRHTGGGMTAMNFVDYEYMVEDTPVQTVLVEYRLGSDPGKPLV
                     A"
     gene            complement(593..1603)
                     /gene="hemB"
                     /locus_tag="VHZ56_10965"
     CDS             complement(593..1603)
                     /gene="hemB"
                     /locus_tag="VHZ56_10965"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEX4298531.1"
                     /translation="MSDWPRYDMDFLGGRRQRRLRASPWMRELVRETTLTPADFILPL
                     FVIEGKNERTSIKSMPGVERLSIDLAVKAAKAAAAAGIPALALFPNTPDQLRNPDGSE
                     AYNPNNLMCRALKAIKDKVPQIGLIADVALDEYSSDGQDGLVRDGEILNDETVAAMVR
                     SALVQAAAGADIIAPSDMMDGRVAAIRQELDAAGHERVAIMAYSAKFASAFYGPFREA
                     VGSGKRLLGDKKTYQLDYANTDEALREVAQDIDEGADMVMVKPGMPYLDVIRRVRDSF
                     NVPVFAYQVSGEYTMLRLAADAGAIDGRAAMLEALWAFKRAGAKGVLTYFALEAARAL
                     GG"
     gene            1744..2133
                     /locus_tag="VHZ56_10970"
     CDS             1744..2133
                     /locus_tag="VHZ56_10970"
                     /inference="COORDINATES: protein motif:HMM:NF039363.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6163 family protein"
                     /protein_id="HEX4298532.1"
                     /translation="MDFNSPIGGRYVRIVAIIALLLGLNDASRLLGVSTGSQNPIDLL
                     GVTGFVYLGCFAMAQLFAAVGLWIRASWGAVLLVGATGIDLAMYLAGNRDVQMTALGF
                     AVRLVLLVSIVLIFVIGLRFNRDRAHD"
     gene            2305..2814
                     /locus_tag="VHZ56_10975"
     CDS             2305..2814
                     /locus_tag="VHZ56_10975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006931552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix DNA-binding protein"
                     /protein_id="HEX4298533.1"
                     /translation="MATKSNAVEAEVQGSAGGLKPAYLEAVSRVERLHRRLLDLIKDE
                     FDRMGWDDINPVQALLMFNIGDAEMTAGELRSRGYYLGSNVSYNLKKLVETGYIFQER
                     SRADRRSVRIRLTPKGEEVAEVIDELYDRHLKSIDKVGGLTGETFEGLNKALGRLERF
                     WVDQILYKL"
     gene            3080..4354
                     /locus_tag="VHZ56_10980"
     CDS             3080..4354
                     /locus_tag="VHZ56_10980"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX4298534.1"
                     /translation="MTVNRRKLLTSMAALGAAAAFPGLARADDDDDSDSIWDILSRNV
                     RRKQVDPDKNTSAALAIIDTPEPILSFDTVNNIQTAIAYYQQVVQQGGWEPITRAAFG
                     LLNGKDGQPVIPLKRQLMLTGDMTPAPRVDDRFDDAMDLAVRKFQVRHGVVPTGKIDE
                     RTFYAMAVTADQRLAQLQLNQQRVTNETGALADSYVAVNIPAASLEAIDGGMVTQRHT
                     AVVGRIDRPTPLVNSKIMQINFNPFWHVPKSIIQKDLIPQMQKDPTYLADFHIRAYNS
                     KGQEVDPSTVDWTSPTDALNYAFTQDPGAFNSEGHVKINFPSPDDVYLHDTPEKELFA
                     EDERFDSSGCVRVKDVDQLVTWLLRENGGWALEDVQSAMESNQRLDVTLKKQTPLHTT
                     YVTAWSNRMGTVSFRDDVYQLDAQGQLALSSG"
     gene            4354..4563
                     /locus_tag="VHZ56_10985"
     CDS             4354..4563
                     /locus_tag="VHZ56_10985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020178914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEX4298535.1"
                     /translation="MGQGAGGKPPGPDSDIYFEFTQIGPQMRVAAIDGRTGVEVVIIA
                     PLSATQRQMQTLALAKLRRRLEAGN"
     gene            complement(4606..4845)
                     /locus_tag="VHZ56_10990"
     CDS             complement(4606..4845)
                     /locus_tag="VHZ56_10990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298536.1"
                     /translation="MFVSPFVAALLLGSFWTGVGATAVINHNGGDWWRNNRNDVEITA
                     NTSDHFAACHARYRTYDEGRDEYIVRPGVWARCTL"
     regulatory      5005..5086
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01750"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="ZMP/ZTP riboswitches appear to regulate genes
                     involved in one-carbon metabolism; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="5-aminoimidazole-4-carboxamide
                     ribonucleotide (ZMP)/
                     5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl
                     5'-triphosphate (ZMT)"
                     /db_xref="RFAM:RF01750"
BASE COUNT          913 a         1788 c         1666 g          952 t
ORIGIN      
        1 gcgaccagcg gtttgcctgg atcggagccg aggcggtact cgaccagcac cgtctgcacc
       61 ggtgtgtcct cgaccatgta ctcgtagtcg acaaaattca tcgcggtcat gccgccgccg
      121 gtgtgccttg tatcgaggta ccgcttgaac agcgcgaact gctcggcggt ggcgcgcggc
      181 gtgcgcacgg ccacctcgat gtcggcattc tgcttgagga tgcggcgata gcgggcgttc
      241 gtctcgaact cgcgcgccag gatgcggacc gattggcagg cggcgcagcc ctcgcacgcc
      301 gggcggtaga tgaggttctg gctgcgccgg aagccgttgt cgctgagcag cgcatgcagc
      361 gccgaggcgc gtcggccggt aagatgggta aagagcttgc gctcctgatg gccgggcaga
      421 tacgggcacg gcatcggcgc cgtaaggaaa agctgtgtgt tttccggggt ctggtcggtc
      481 atagcactcg tccgcaacgc cggagcctac gcttggtcga ttccgagggc actgcacggt
      541 gtcttccggg ctcccggaat cccggcttgc aaaacgcgca aacccgtcgg cctcagccgc
      601 ccagcgcccg cgccgcctcg agcgcgaagt aggtgaggac gcctttcgcg ccggcgcgct
      661 tgaacgccca cagcgcttcc agcatcgccg cccggccgtc gatggcgccg gcatcggccg
      721 cgagccgcag catcgtgtat tcgccgctca cctggtaggc gaacaccggc acgttgaagc
      781 tgtcccgcac ccgtcggatg acgtcgagat acggcatccc cggcttgacc atcaccatgt
      841 cggcgccctc gtcgatgtcc tgcgccacct cgcgcagggc ctcgtcggtg ttggcgtagt
      901 cgagctggta cgtcttcttg tcgccgagca gccgcttgcc cgacccgacc gcttcgcgga
      961 acggcccata gaaggccgag gcgaacttgg ccgaataggc catgatcgcg acccgttcat
     1021 gcccggccgc gtcgagctcc tggcggatgg cggcgacgcg gccgtccatc atgtcggacg
     1081 gcgcgatgat gtcggcgccc gccgccgcct gcaccagcgc cgagcggacc atcgcagcca
     1141 ccgtctcgtc gttgaggatc tcgccgtcgc ggacgaggcc gtcctggccg tccgacgaat
     1201 attcgtcgag cgccacgtcg gcgatgaggc cgatctgggg caccttgtcc ttgatggcct
     1261 tcagcgcccg gcacatcagg ttgttcggat tgtaggcctc cgacccgtcc ggatttcgca
     1321 gctggtcggg cgtgttcggg aacagcgcca gcgccgggat gcccgccgcg gccgccgcct
     1381 tggccgcctt gaccgcaagg tcgatgctca gccgctcgac ccccggcatc gatttgatcg
     1441 aggtccgctc gttcttaccc tcgatgacga acaacggcag gatgaagtcg gccggcgtca
     1501 gcgtcgtttc gcgcaccagc tcgcgcatcc acggcgacgc gcgcagccgc cgctgccggc
     1561 gcccgccgag gaaatccatg tcgtatctgg gccagtcgct catggcgtgc tcattagcag
     1621 cgtcgttccc ccagtgtcat ccccgcgaag cggggacccg tgtttgggcc gctgcccagg
     1681 gcaagttcgg tcgccgcttt cgcggggatg acactgggtg agatttggcg gtatctgtgc
     1741 ccgatggact tcaactcgcc catcggcggc cgctacgtcc gcatcgtcgc gatcatcgcg
     1801 ctgctcctcg ggctcaacga cgcgtcccgc ctgctcggcg tctcgaccgg ctcccagaac
     1861 cccatcgacc ttctcggcgt caccggcttc gtctatctgg gctgcttcgc catggcgcag
     1921 ctgtttgccg ccgtggggct ctggatccgg gcgagctggg gcgcggtgct gctggtcggc
     1981 gccaccggca tcgacctcgc gatgtacctc gcgggcaacc gcgacgtgca gatgacggcc
     2041 ctcggctttg ccgtccggct ggtgctgctg gtctccatcg tgctgatttt cgtcatcggc
     2101 ctccgcttca accgggaccg cgcgcacgac tgattaagct tacttctttc agtactgccg
     2161 taacctctcg taaagccaaa ttcccgaact ttttcagtaa gatgtgctta agcgtgcggc
     2221 ttaagtcgat cttattttgg cccatctaag ttcgccctat gagaggcgga aaatcgcccg
     2281 gacgacagaa acagtgaggc aagaatggca accaaatcca atgccgtcga ggcagaggtg
     2341 cagggcagtg caggcggcct gaagccggca tatctcgagg ccgtaagccg cgtggagcgg
     2401 cttcaccgcc gactgctcga tctgatcaag gacgagttcg accgcatggg gtgggacgac
     2461 atcaaccccg tgcaggcgct gctgatgttc aacatcggcg acgccgagat gaccgccggt
     2521 gagctccgct cgcgcggcta ttatctgggc tcgaacgtct cctacaatct caagaagctg
     2581 gtcgagaccg gctacatctt ccaggagcgc tcgcgcgccg accgtcgctc ggttcgcatc
     2641 cgcctgaccc ccaaggggga ggaagtcgcc gaggtcatcg acgaactcta cgaccgtcac
     2701 ctcaagtcga tcgacaaggt cggcgggctg accggcgaaa ccttcgaggg gctgaacaag
     2761 gccctcggcc ggctggagcg gttctgggtc gaccagatcc tctacaagct ctaggcgcgc
     2821 cgccgagcgg cggtacccat tgcgaattgt ggcgtcgggg ccacaaccgc gcacaaacgc
     2881 cggcctcagc gccggcgttt cttatttgcg ccgcaaattt cgctaaaaac cgaggggcga
     2941 cgcgtcctcc cgctcgcttg ttccgctttc cagatgtccc gcgggtttca cagctcgttg
     3001 accggtgttg tggccggaca gctgcagatg gtatttttgc accgcgtcat tgtttgccct
     3061 ccgatcaact ggtgactgca tgactgtgaa tcgccgcaag ctcctgacct cgatggccgc
     3121 tctcggggcc gccgcggcgt tcccgggctt ggcgcgtgcc gacgatgacg acgattccga
     3181 ttcgatctgg gatatcctgt cgcgcaatgt ccgccgcaag caggtcgatc cggacaagaa
     3241 cacgtccgcc gcattggcga tcatcgatac gccagagccg atcctcagct tcgacacggt
     3301 caacaacatc cagaccgcca tcgcgtacta ccagcaggtg gtgcagcagg gtggctggga
     3361 gccgatcacc cgggccgcct tcggcctcct gaacggcaag gatggccagc cggtcatccc
     3421 gctcaagcgc cagctcatgc tgacaggcga catgaccccg gcgccacgcg tcgatgatcg
     3481 cttcgacgac gccatggacc ttgcggtgcg caagttccag gtgcgccacg gcgtggtgcc
     3541 gaccggcaag atcgacgagc gcacctttta tgcaatggcg gtcaccgccg accagcgtct
     3601 tgcccagctg cagctcaacc agcagcgcgt caccaacgaa accggcgcgc tggccgacag
     3661 ctatgtcgcc gtcaacatcc cggcggcgtc gctcgaggcg atcgacggcg gcatggtcac
     3721 gcagcgccat accgccgtgg tggggcgcat cgaccggccg acgccgctgg tcaattccaa
     3781 gatcatgcag atcaacttca atcccttctg gcacgtgccc aagagcatca tccagaagga
     3841 cctgatcccg cagatgcaga aggatccgac ctacctcgcc gacttccaca tccgcgccta
     3901 caattccaag gggcaggaag tcgacccgtc cacggtcgac tggacctcgc cgaccgacgc
     3961 gctgaactac gccttcaccc aggaccccgg cgccttcaat tccgaaggcc acgtcaagat
     4021 caatttcccc agtcccgacg acgtctacct gcatgacacg ccggaaaaag agctcttcgc
     4081 cgaagacgag cgcttcgact cttcgggctg cgtgcgcgtc aaggacgtcg accagctggt
     4141 gacctggctg ctgcgcgaga acggcggctg ggccttggag gatgtgcagt cggcgatgga
     4201 gtccaaccag cgcctcgacg tcaccctcaa gaagcagacg ccgcttcaca ccacctacgt
     4261 tacggcgtgg tccaaccgca tgggaaccgt cagcttccgc gacgacgtgt accagctgga
     4321 tgcccagggc cagcttgccc tgtcgagcgg ctgatggggc agggggccgg tggcaagccg
     4381 cccggtcccg atagcgatat ctatttcgag ttcacccaga tcggcccgca gatgcgggtt
     4441 gctgcgatcg acggcaggac cggcgttgaa gtcgtgatca tcgcaccgct gtctgcaacc
     4501 cagcgccaga tgcagaccct ggcactggcg aagctccggc gccggttgga agccggaaac
     4561 tgaaagggcc cgccgaagcg ggcccttttc tgcgaacgaa gccgcttaca gcgtgcagcg
     4621 cgcccagacg cccgggcgca cgatgtactc gtcgcggccc tcgtcgtagg tccgatagcg
     4681 agcgtggcag gcggcgaagt gatcgctggt gttggcggtg atctcgacgt cattgcggtt
     4741 gttccgccac caatccccac cattgtggtt gatgacggcc gtagcgccga cgccggtcca
     4801 gaagctgccg agcagcaggg cggcgacaaa ggggctgacg aacatgttgc atctccttgg
     4861 tttctttacg gtattaacca aagtcgacgc cgctgcgccg ccgggaggag gcagcgcatc
     4921 aaccttgatg tccgctcaac tcggcggcag cggagtcgtt ccccgccggg ccctttcgtc
     4981 gcggaccgaa gcggcgcata atgcgggcgt tcgcgcgact ggcgagatga gatgggaaac
     5041 catcgggaaa cgcgaacgca ctttgccgct cgcctgggca tcctcaaccc gcaatggagg
     5101 cccatatgtc gtttgaattc gccacagtcg cgcgccgcgc tcgcggcctt ggaatcgcca
     5161 ggtgccacat gatagaggcg ggccttcgcc cgtcctctcc gcacccgcat ctgggggaac
     5221 gcccatgagc gccaccgcgt cgcttccgct ctttccgaac ttcttttcgg cgacgctcgc
     5281 cgagaccgac cccgagatcg ccgaggccat ccgcaatga
//
LOCUS       DATAZA010000431         4025 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4003622, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000431 DATAZA010000000
VERSION     DATAZA010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4025
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4003622"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            159..1418
                     /locus_tag="VHZ56_10995"
     CDS             159..1418
                     /locus_tag="VHZ56_10995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017991965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4298537.1"
                     /translation="MLLKTLAGLTVALMVTAAGSAVLADQTPLTIYHSWSTPSEMAAL
                     NVLKSDLASNNIGWNEIAIPHDTGANVSLTNMVAGGNPPNVFMNSDPGIIRDLAKQGL
                     IMDLTQYFKDNNIAQNLPPTVLQEITVDGKIYKAPAGIHIDGMVYWNMDVAKKAGVDP
                     TKWTSLDTMFADFDKVKTAGFIPLAIGSDSFQVGYLTHALIAAVAGPDVYNRFYGPTV
                     DKTVFDDPALKQAIDWVRKFSQQVDPGSQNRAWNDTTALVITGKALMQIHGDWMKGEW
                     RNAGKVVGQDFGCENIPGTKALAVTVDAWNFLDGPAVTADQKAAELEFAKLDTDPKIT
                     ADFASKKGSTPVRTDVDPSTLDACNKVVLDSLSKPNMSVQNPFNISDSDWVRSVWNVM
                     FKFWGDQTETSDQAIQELKDQYDQVFG"
     gene            1725..>4025
                     /locus_tag="VHZ56_11000"
     CDS             1725..>4025
                     /locus_tag="VHZ56_11000"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX4298538.1"
                     /translation="MFEPAYKSLPPIDYVSMIRSLYAERRVMMLGALASALAAALAGF
                     EAMNWALFGVAAGFIVIGVVRYFDMLAFARLDFADDDVETARRWEARATVGAAAIALL
                     YGIWSFYSFVFVNTPFSEMASLAVSVSVLVGVAGRNFAIDRLMTTQVVLIGGPLAAGM
                     LLDGTFHTAMLSIVLLAFFASIRKVSANIRALLIRAVHGRLEASRLADELDTALETMR
                     HGLCMLDADGLVAVVNDEAESIFDSFVPGSWKGRPFAAMLSAAAARGSVPQRAVEQLL
                     PIVSGHRNGKLILKLANAQFSEVTVSARQGKVVLLFEDITERVRAEERINFMAHYDAL
                     TGLPNRGYFAEQVEADLGDRRQSQSGAMAMLMIVDIDDFKHVNDTTGHLVGDRLLVES
                     AERLNRTLGGRSLVARLGGDEFIVYRSGGVASEDSIEDPAAVLAAFKAPFSIMGESLS
                     VDVSIGVVASSTAEDDLDALMTKADLALYKAKGNGKGQSQIFHDDMDTAYRYRQRLKA
                     ELRTAVAAGALTLAYQPLIDLRTRRVVACEALARWTHPVLGSIPPSLFIPIAEETGLI
                     SDITRWVLRTATVECGNWPDDISVSINVSARDFRNADVEDMVLGALKASGLDAGRLEI
                     EVTETALIEERDAATKILNKLGKRGVGIALDDFGTGYSSLSYLQALPFTKLKVDRSFV
                     MDITSNARSLKLLSNVAQLGKDINLTVTAEGVETEEQLQLIIAHTKVDQIQGYLFGVP
                     LPARDLRELIGRMAQSAPPVEAKRKHG"
BASE COUNT          713 a         1328 c         1333 g          651 t
ORIGIN      
        1 ttcgacgccg cctccgggca gcgcctctag cggccacgcc cgacagcggg cgccagttgt
       61 ggagatctcg tccacacgat ttcagcgacg gtgcccgaga tcggcccgtt gcagcagcga
      121 ccggatcccg cacggatccg cagcagggag gactatcgat gcttctcaag acacttgccg
      181 ggctcaccgt cgccctgatg gtgacggcag cgggcagcgc ggtgctggcc gaccagacgc
      241 ccctcaccat ctaccattcg tggtcgacgc caagcgaaat ggcggcgctc aacgtgctca
      301 agagcgacct cgccagcaac aatatcggct ggaacgagat cgccattcca cacgacaccg
      361 gcgccaatgt ctcgctcacc aacatggtgg ccggcggcaa cccgccgaac gtcttcatga
      421 actcggaccc cgggatcatc cgcgatctcg ccaagcaggg cctgatcatg gacctgacgc
      481 agtatttcaa ggacaacaac atcgcccaga acctgccgcc gacggtgctg caggagatca
      541 ccgtcgacgg caagatctac aaggcgccgg cgggcatcca catcgacggc atggtgtact
      601 ggaacatgga cgtggccaag aaggccggcg tcgatccgac caagtggacc tcgctcgata
      661 cgatgttcgc cgacttcgac aaggtgaaga ccgccggctt catcccgctc gccatcggca
      721 gcgactcgtt ccaggtcggc tacctgacgc atgcgctgat cgcagcggtc gccgggccgg
      781 acgtctataa ccggttctac ggcccgaccg tcgacaagac ggtgttcgac gatccggcgc
      841 tgaagcaggc gatcgactgg gtgcgcaagt tcagccagca ggtcgacccc ggctcgcaga
      901 accgggcctg gaacgacacc accgcgctgg tgatcaccgg caaggcgctg atgcagatcc
      961 atggcgactg gatgaagggc gagtggcgca atgccggcaa ggtcgtcggc caggatttcg
     1021 gctgcgagaa catccccggc acgaaagcgc tggcggtgac ggtcgacgcc tggaacttcc
     1081 tcgacggccc ggcggtgacg gcggaccaga aggccgccga gctcgaattc gccaagctcg
     1141 acaccgatcc caagatcacc gccgatttcg cgtccaagaa gggctcgacg ccggtgcgca
     1201 ccgacgtcga tccgtcgacg ctggacgcct gcaacaaggt ggtgctcgat tcgctgagca
     1261 agcccaacat gtcggtgcag aacccgttca acatctccga cagcgactgg gtgcgttcgg
     1321 tctggaacgt gatgttcaag ttctggggcg accagaccga gacgtccgac caggcgatcc
     1381 aggagctcaa ggaccagtac gaccaggttt tcggctgatc gtcctcccga cgacgccatg
     1441 ggcggggggc attgctcccc gctctctctc ggtttcccgc agtgtgcatg tgcacaggtg
     1501 gcagccgctg ccgccgtgac cgccccgctg cccccgtcga aaaagcggat actgccgatc
     1561 cggcgattgc cgccgattgg ccaaaccctc cgtcaaccat gcacttagat tggccttcca
     1621 ggcgtggcgg ggactgcgct ggcgcggctc tccggtaacg aactcgaaat ccggcattaa
     1681 cggctgctct ggcactattg cccgccaact ggtccgggaa cgagatgttc gagccagcct
     1741 ataagtcgct gcctcccatc gactatgtct ccatgatccg gtcgctctat gcggagcgcc
     1801 gggtgatgat gcttggcgcg ctggcgtcgg cgctggcggc cgcgctggcc ggcttcgagg
     1861 cgatgaactg ggccctgttc ggcgtcgccg ccggcttcat tgtcatcggc gtcgtgcgct
     1921 atttcgacat gctggcgttt gcgcggctcg atttcgccga cgacgacgtc gagacggcgc
     1981 ggcgctggga ggcgcgggcg acggtcggcg cggcggcgat cgcgctgctc tatggcatct
     2041 ggagcttcta cagcttcgtg ttcgtcaaca cgccgttctc cgagatggcg agcctcgcgg
     2101 tctcggtctc ggtgctggtc ggcgtcgccg gccgcaactt cgccatcgac cggctgatga
     2161 cgacgcaggt ggtgctgatc ggcgggccgc tggccgccgg catgctgctc gacggcacct
     2221 tccacacggc catgctgtcg atcgtgctgc tggcgttctt tgcctcgatc cgcaaggtct
     2281 cggccaatat ccgcgcgctg ctcatccgcg cggtgcacgg ccggctcgag gcgagccggc
     2341 tggccgacga gctcgatacc gccctcgaga cgatgcgcca tggcctctgc atgctcgatg
     2401 ccgacggact ggtggcggtg gtcaacgacg aggccgagag catcttcgac agtttcgttc
     2461 cgggcagctg gaagggccgg cccttcgcgg cgatgctgtc ggcggccgcg gcgcgcggca
     2521 gcgtgccgca gcgggcggtc gagcaattgc tgccgatcgt cagcggccac cgcaacggca
     2581 agctgatcct caagctcgcc aacgcccagt tcagcgaagt cacggtcagc gcccggcagg
     2641 gcaaggtggt gctgctgttc gaggacatca ccgagcgcgt gcgggccgag gagcggatca
     2701 acttcatggc gcattacgat gcgctgacgg gcctgcccaa ccgcggctat ttcgccgagc
     2761 aggtggaggc cgacctcggc gatcgccggc agagccagag cggcgccatg gcgatgctga
     2821 tgatcgtcga catcgacgat ttcaagcacg tcaacgacac caccgggcat ctggtgggcg
     2881 accggctgct ggtggaaagc gccgagcggc tcaaccgcac gctgggcggg cgcagcctcg
     2941 tggcgcggct gggcggcgac gaattcatcg tctatcgcag cggcggggtg gcgagcgagg
     3001 acagcatcga ggatcccgcg gcggtgctgg cggcgttcaa ggcgccgttc tcgatcatgg
     3061 gagagagcct ctcggtcgac gtgtcgatcg gcgtcgttgc ctcgagcacg gccgaggacg
     3121 atctcgacgc gctgatgacc aaggcggacc tcgcgctcta caaggccaag ggcaacggca
     3181 agggccagtc gcagatcttc cacgacgaca tggacaccgc ctaccgctac cggcagcggc
     3241 tcaaggccga gctgcggacg gcagtcgcgg ccggggcact gacgcttgcc taccagccgc
     3301 tgatcgacct gcgcacgagg cgggtcgtcg cctgcgaggc gctggcgcgc tggacgcacc
     3361 cggtgctggg ctcgatcccg ccatcgctgt tcattccgat cgccgaggaa accgggctga
     3421 tctcggatat cacgcgctgg gtgctgcgga ccgcgaccgt cgaatgcggc aactggccgg
     3481 acgacatctc ggtgtcgatc aacgtgtcgg cccgcgattt ccgcaacgcc gatgtcgaag
     3541 acatggtgct gggggcgctg aaggccagcg ggctcgacgc cggccggctc gagatcgagg
     3601 tcaccgagac ggcgctgatc gaagagcgcg acgcggcgac caagatcctc aacaagctcg
     3661 gcaagcgcgg cgtcggcatc gcgctcgatg atttcggcac cggctactcg tcattgagct
     3721 atctgcaggc gctgcccttc accaagctca aggtcgaccg cagcttcgtg atggacatca
     3781 ccagcaacgc ccggtcgctg aagctgctca gcaacgtcgc gcagctgggc aaggacatca
     3841 atctcacggt caccgccgaa ggggtggaga ccgaggagca gctccagctc atcatcgccc
     3901 ataccaaggt ggaccagatc cagggctacc tgttcggcgt gccgctgccg gcgcgcgacc
     3961 tgcgcgagct gatcggccgg atggcgcaga gcgcgccgcc ggtcgaagca aaacgcaagc
     4021 atggt
//
LOCUS       DATAZA010000432         1862 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1218531, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000432 DATAZA010000000
VERSION     DATAZA010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1862
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1218531"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1160
                     /locus_tag="VHZ56_11005"
     CDS             <1..1160
                     /locus_tag="VHZ56_11005"
                     /inference="COORDINATES: protein motif:HMM:NF039722.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF6311 domain-containing protein"
                     /protein_id="HEX4298539.1"
                     /translation="DRRHRSLAWGALLTLSALVHTYFLAMCVPIWIASLVGRRGKREF
                     SAPWWLEVPAVLAAIGAALWLGGFFPLRSSLMTYGYGIFSLNLLSLVNPNGSFVGPWS
                     WSAILPMLPQGGGEYEGFNYLGAGGLVAVIVGLVLAWLDRAAYARRHLWPLAIAAIAL
                     ALFAITPKVTVADLQLTIPVPRLVYALAGSIRASGRFFWPVFYMIVLGALWLCNRRFG
                     SRVTGPLLLVLAALQIYDTYPGWGSFTSKFALDATSWQTPLSDPRLVAVASHYAAVRA
                     LPATNQVPGWDQIAYFALRNHKPTDAVYLARPNDAAYAQYNARLDQRIALHGLESDSI
                     YFLDRIYAHKIAATMAPADAMFQVGRFYVFAPGWRRFGVATDLPPVTDFWR"
     gene            1165..>1862
                     /locus_tag="VHZ56_11010"
     CDS             1165..>1862
                     /locus_tag="VHZ56_11010"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX4298540.1"
                     /translation="MTAPVDEIIGRYPKARPALPEAQRRVYEREYKLNRQGGSLLTRM
                     SSGLEAWMHRRVAAAAGGGDVLELGAGTLNQLGYEAANPGYDVIEPFHALYADSQQKG
                     RIRAFYDDIVEVPAGRRYQRITSVAVLEHVDDLPVIMARSALLLADDGVFQAGIPSEG
                     GLAWGLAWRTTTGVAYWLRNRLDYGVLMRHEHLNTAAEIETMTRHFFGEVRVARFPLP
                     ARQLSFYSYLEARRP"
BASE COUNT          261 a          611 c          657 g          333 t
ORIGIN      
        1 cggaccggcg ccatcgctcg ctcgcctggg gcgcgctgct gacgctgagt gcgctggtgc
       61 atacctactt cctcgcgatg tgcgtgccga tctggatcgc gagcctggtc ggccgccgcg
      121 gcaagcgaga gttttcggca ccgtggtggc tggaggtccc ggcggtgctg gcggcgattg
      181 gagcggcgct ctggctgggg ggattcttcc cgctgcgctc cagcctgatg acgtatggct
      241 acggcatctt cagcctgaac ctgctgagcc tcgtcaatcc caacggatcg ttcgtggggc
      301 cgtggtcatg gtcggccatc ctgccgatgc tgccgcaggg cggcggcgag tatgaaggct
      361 tcaactatct cggtgccggc ggcctcgtgg cggtgatcgt ggggctggtg ctcgcgtggc
      421 tggatcgagc cgcctatgcc cgtcggcatc tctggccgct ggcgattgca gcgatcgccc
      481 tggcgctgtt cgcgatcacc ccgaaagtca ccgtcgccga cctgcagctg acgattccgg
      541 taccgcgcct cgtctatgcg ctggccggca gcatccgcgc gtcggggcgg ttcttctggc
      601 cggtattcta catgatcgtg ctgggcgccc tgtggctgtg caaccggcgg ttcggcagcc
      661 gggtgacggg gccgctgctg ctggtgctgg cggcgctgca gatctacgac acctatccgg
      721 gatggggatc gttcacgtcg aagtttgcgc tcgacgccac gagctggcag acgccgctgt
      781 ccgatccgcg gctcgtcgcc gtggccagcc actacgccgc ggtgcgcgcc ctgcccgcga
      841 ccaaccaggt gccgggctgg gaccagatcg cgtatttcgc gctccgcaac cacaagccga
      901 cggacgcggt gtacctcgcg cgcccgaatg acgccgccta tgcccagtac aacgcgcggc
      961 tcgatcaacg gatcgccctg catggcctcg aatccgattc catctatttc ctcgaccgga
     1021 tctacgcgca caagatcgca gcgacgatgg cgccggccga tgcgatgttc caggtcggac
     1081 ggttctacgt gttcgcgccg ggctggcgtc gcttcggcgt ggcaaccgac cttcccccgg
     1141 tcaccgattt ctggagatga cggcatgacg gctccggtcg acgagatcat cgggcgctat
     1201 ccgaaggcgc gtccggcgct gccggaggcc cagcggcggg tgtatgagcg cgagtacaag
     1261 ctcaaccggc agggcggcag cctgctgacc cgcatgtcga gcggtctcga ggcgtggatg
     1321 catcggcgcg tggcggcggc agcgggtggc ggcgacgtgc tcgagctcgg cgccggcacg
     1381 ctcaaccagc tcggctacga ggcggcgaac ccgggctatg acgtgatcga accgttccac
     1441 gcgctctacg cggacagtca gcagaagggg cggatccggg cgttctacga cgacatcgtg
     1501 gaagtgccgg cggggcgccg ctaccagcgg atcaccagcg tcgcggtgct cgagcatgtc
     1561 gacgatctcc ccgtcatcat ggcgcggtcg gcgctgctgc tggcagatga cggcgtattc
     1621 caggcgggga ttccgtccga gggcgggctc gcgtggggac tcgcgtggcg gacgaccacc
     1681 ggggttgcct attggctgcg caaccggctc gactatggcg tgctgatgcg gcacgagcac
     1741 ctcaacaccg ccgccgagat cgagacgatg acccggcatt tcttcggcga agtgcgagtg
     1801 gcgcgctttc cgctgccggc gcggcagctg agcttttaca gttacctcga ggcgcggcgg
     1861 cc
//
LOCUS       DATAZA010000433         6649 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4119780, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000433 DATAZA010000000
VERSION     DATAZA010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6649
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4119780"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1657
                     /locus_tag="VHZ56_11015"
     CDS             <1..1657
                     /locus_tag="VHZ56_11015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX4298541.1"
                     /translation="KHVEKDAALARRFQPVFVSEPTVEDTISILRGLKEKYELHHGIR
                     ISDSAIVAAATLSNRYIADRFLPDKAIDLMDEAAARLRMAVDSKPEALDELDRRIMQL
                     KIEREALKKEPDEASKQRLERLEHDLGGLEDEAQALSSKWLSEKERVQGSQKLKEELD
                     QARSALEIAQRSGDFTRAGELAYGVIPGLEKRIKEAEQAKGGTASDMVSEVVTASDIA
                     QVVSRWTGIPVDRMLEGEREKLVQMEASLGQRVIGQEEAVAAVSRAVRRSRAGLQDPN
                     RPIGSFMFLGPTGVGKTELTKALAEFLFDDEHAMVRLDMSEFMEKHSVARLIGAPPGY
                     VGYDEGGVLTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRN
                     TIIIMTSNLGSEWLVNLKENESVELVRGKVLDAVKAAFRPEFLNRVDDIILFHRLQRI
                     HMGDIVAIQLKRLGALLKDRDIALELTPKGQEWLAREGYDPAYGARPLKRVIQREVQD
                     RLAEAILAGDVTDGQKVRVDAGDAGLMLVPELEGEVMSPKAAA"
     gene            complement(1723..2412)
                     /locus_tag="VHZ56_11020"
     CDS             complement(1723..2412)
                     /locus_tag="VHZ56_11020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298542.1"
                     /translation="MTTLPFTLRIDPKPMQVLLTVEGTPAATDREQTRQAHNMAAGSD
                     QGVAAARSFGDLSHAVFVPAGPAAANRLLFIDFWNSVEGLMQFFSDPQVQKGGEMLFK
                     DRQPVVWAPSPGLPRISLPAPTGHNDRYVGLVKGPVASRDAAEKLLTEATRKALNGNR
                     ARGLLSREWFFRADQSDALEAIGLDVWFDADGMQAIYNDPDEMKPLASLFTARPETSV
                     WEKPKGQWVEW"
     gene            2555..3172
                     /locus_tag="VHZ56_11025"
     CDS             2555..3172
                     /locus_tag="VHZ56_11025"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX4298543.1"
                     /translation="MPYSPAHKPMTRTRIVQAARRLFNIRGFAAVSIDEIMAEAGLTR
                     GGFYKHFSRKQDLYREAVLEFICLEVPEPWQRHVDPRQSGPALVRMILEAYLSDEHLE
                     DQAASCPMIALPSDVQRGEPEVKGAFREVLEMMAGAFAANLPPDGRPARERALALVSL
                     AVGAMVLARSVDDPGLAAELRHSARAEASRSTGWDLEPAQAAAAQ"
     gene            3234..3572
                     /locus_tag="VHZ56_11030"
     CDS             3234..3572
                     /locus_tag="VHZ56_11030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007700029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX4298544.1"
                     /translation="MPYAIDYFEVPSADNAKTRMFMGKAFGWSFVNFGDTYDEIHDAG
                     MVGGINGDAADRSAAPMLVIRTDDIEKAERDVVAAGGVITRKPYDFPGGRRFFFREPG
                     GAELAVYATR"
     gene            complement(3569..5596)
                     /locus_tag="VHZ56_11035"
     CDS             complement(3569..5596)
                     /locus_tag="VHZ56_11035"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX4298545.1"
                     /translation="MNPAQRNRSLALVRAGFEDGPALTVASTDGEIPQGRELSFAWLT
                     GTVMTGLTSVLLMGAALYVSFQGQSTFSTAYEALQIITGAQGPTADLINKTDRIRPVT
                     QTKSETEIVEASIKESVDGRDMIKTQPFVRIRATLATTATSLSGDVPAYDPSSLIDQS
                     QPIMAPDDSASTDIYGGAVEGEVQIKTTAMPDTFVPPQAIDDQLAEAFVRQLVDSAYT
                     ETGDDVDANGTDTGDGTVAAADQGTSLHDLGIVDGGLGGVAENVTVLPKTTPADQAGL
                     GRSERILTVHDQIKVADMLLKNGFTQQMIDAISTTLKNVYPEPTLPAGAHLRILFGPS
                     RSSDTLIPYRLSIYVHDDTSNTDKHAVTVALTDRGTYVIGLAPSEITFPTEDVEQVDV
                     SNLPTVYRAIWETARKHDLADDVTKRIVAMYAYDVDLTKRITPGDSIEVLETPKDTDG
                     KQDLLYVGLKLGSTMHQLYRFRTDDAQVDFYDPNGETGKRFLIRRPLQGGGTLSSRFG
                     WRVHPIFHTRLLHTGVDLASPTGTPIYAAGDGIVEHASWENGYGNFTMLKHVNGYETG
                     YGHQSKIVVKVGDKVRQGQIIGYVGSTGNSTGSHLHFEIRINGNFVDPLSVKLPRDHA
                     LPAQDDDAFQQTIAQIDDLMKRDGQAADDATQVATAAAGSPPPASASATQG"
     gene            6317..>6649
                     /locus_tag="VHZ56_11040"
     rRNA            6317..>6649
                     /locus_tag="VHZ56_11040"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT         1120 a         1922 c         2449 g         1158 t
ORIGIN      
        1 caagcacgtc gaaaaggatg cggcgctggc gcggcggttc cagccggtgt tcgtctcgga
       61 gccgacggtc gaggacacga tctcgatcct gcgcgggctc aaggagaaat acgagctgca
      121 ccacggcatc cggatttcgg actcggcgat cgtggcggcg gcgactttga gcaaccgcta
      181 cattgcggat cgcttcctgc ccgacaaggc catcgacctg atggacgagg cggcggcgcg
      241 gctgcgcatg gcagtcgatt cgaagcccga ggcactggac gaactcgatc ggcggatcat
      301 gcagctcaag atcgagcgcg aggcgctgaa gaaggagccg gacgaggcca gcaagcagcg
      361 gctcgaacgg ctcgagcacg accttggcgg cctcgaggac gaggcgcagg cgctgtcgtc
      421 gaaatggctg agcgagaagg agcgggtgca gggcagccag aagctcaagg aagagctgga
      481 ccaggcgcgc tcggcgctcg agatcgcgca gcgctcgggc gatttcaccc gcgccggaga
      541 gctcgcctac ggcgtgatcc cggggctcga gaagcggatc aaggaagccg agcaggctaa
      601 gggcggcacg gccagcgaca tggtgtcgga ggtggtcacc gcgtcggaca tcgcgcaggt
      661 ggtgtcgcgc tggaccggca ttccagtcga ccgcatgctc gagggcgagc gcgaaaagct
      721 ggtgcagatg gaagcctcgc tcgggcagcg cgtcatcggg caggaggagg ccgtggcggc
      781 cgtttcccgc gcggtgcggc gctcgcgcgc tgggctgcag gatccgaacc ggccgatcgg
      841 ctcgttcatg ttcctggggc cgacgggcgt cggcaagacc gagctcacca aggcgctggc
      901 ggaattcctg ttcgacgacg agcacgccat ggtgcggctc gacatgtcgg agttcatgga
      961 gaagcactcc gtagcgcggc tgatcggcgc cccgccgggc tatgtcggct acgacgaggg
     1021 tggggtgctg accgaagcgg tgcggcgccg gccttaccag gtggtgctgt tcgacgagat
     1081 cgagaaggcg catccggacg tgttcaatgt gctgctgcag gtgctcgacg acgggcggct
     1141 gacggacggg caggggcgca cggtcgattt ccgcaacacc atcatcatca tgacctcgaa
     1201 tctgggctcg gagtggctcg tcaacctcaa ggaaaacgag tcggtcgagc tggtgcgcgg
     1261 caaggtgctg gatgcggtaa aggcggcgtt ccggccggaa ttcctcaacc gcgtggacga
     1321 catcatcctg ttccaccggc tgcagcgcat ccacatgggc gacatcgtgg cgatccagct
     1381 gaagcgtctc ggcgcgctgc tgaaggatcg cgacatcgcg ctggagctga cgccaaaggg
     1441 ccaggagtgg ctggcgcggg aaggctacga tccggcctat ggcgcccggc cgctgaagcg
     1501 ggtgatccag cgcgaggtgc aggaccgact ggccgaagcg atcctcgccg gcgacgtcac
     1561 tgacgggcag aaggtgcggg tcgatgctgg cgatgccggg ctgatgctgg tgccggagct
     1621 cgagggcgaa gtgatgtcgc ccaaggcggc ggcgtaagcg cgatagcgca ggagagctgg
     1681 ggctgaggcg ccagcatctc ctgcctggtt gctgggccta gatcaccact cgacccactg
     1741 gcccttcggc ttctcccaca ccgaggtctc ggggcgggcg gtgaacaggc tggcgagcgg
     1801 cttcatctcg tcggggtcgt tgtagatcgc ctgcatcccg tcggcgtcga accagacatc
     1861 gaggccgatg gcttcgagcg cgtcggactg gtcggcgcgg aagaaccatt cgcgcgacag
     1921 caggcccctg gcgcgattgc cgttgagggc cttgcgggtc gcttcggtca gcagcttctc
     1981 ggcggcgtcg cgcgaggcga ccgggccctt gacgaggccg acatagcgat cattgtggcc
     2041 ggtcggcgcc ggcaggctga tgcgcggcag gccgggcgag ggggcccaga cgaccggctg
     2101 gcggtccttg aacagcatct cgccgccctt ttgcacctgc gggtcggaga agaactgcat
     2161 caggccctcg acgctgttcc agaagtcgat gaacagcagc cggttggcgg cggccggccc
     2221 tgccgggacg aagacggcgt ggctcaggtc gccgaaggag cgggcggcgg cgacgccctg
     2281 atcggagccg gcggccatgt tgtgggcctg ccgggtctgc tcgcgatcgg ttgcggcggg
     2341 cgtgccttcg acggtgagca ggacctgcat cggcttgggg tcgatcctga gggtaaaggg
     2401 cagcgtggtc atcggaacct ccagtttgcc cgcgcgacag ccgggcttcg gaggggcatc
     2461 agagagagcg ggagaagatg ttcaagaaca tcttctggcg tgctgctaag atcgtgccgg
     2521 cgccgggttc gtcggcgcag cattggaggt cgccatgccc tattcgcccg cgcacaagcc
     2581 catgacgcgc acccgcatcg tgcaggcggc gcggcggctg ttcaacatcc gcggttttgc
     2641 ggcggtatcg atcgacgaga tcatggccga ggcgggcctg acgcgcggcg gcttctacaa
     2701 gcacttttcg cgcaagcagg acctctaccg cgaggcggtg cttgagttca tctgcctcga
     2761 ggtaccggag ccgtggcagc ggcatgtcga tccgcggcag agcgggccgg cgctggtgcg
     2821 catgattctc gaggcgtatc tgagcgacga gcatctcgag gaccaggcgg cgtcgtgtcc
     2881 gatgatcgcg ttgccctcgg acgtgcagcg gggggagccg gaggtgaagg gcgccttccg
     2941 ggaggtgctg gagatgatgg ccggggcgtt tgcggcgaac ctcccgcccg atggccgacc
     3001 ggcgcgcgag cgggcgctgg cgctggtgtc gctggcggtg ggagcgatgg tgctggcgcg
     3061 gtcggtggat gatccgggcc tggcggcgga attgcgccac agtgcccgcg ccgaagcctc
     3121 gcgcagcacc gggtgggacc tcgagccagc gcaggctgcg gcggcgcagt gaggcttgcg
     3181 cgggcgatgg ctcgctgtta gaacaaaaag agaacgtagg gagcgagtct gcgatgccat
     3241 acgcgatcga ctatttcgag gtgccatcgg ccgacaacgc caagacccgg atgttcatgg
     3301 gcaaggcctt cggctggagc ttcgtcaatt tcggcgacac gtatgacgag atccatgacg
     3361 cggggatggt cggcgggatc aatggcgatg ccgccgaccg cagcgccgcg ccgatgctgg
     3421 tgatccgcac cgacgacatc gagaaggcgg aacgcgacgt ggtcgcggcg ggcggggtga
     3481 tcacccgcaa gccctatgat tttcccggtg ggcggcggtt cttcttccgc gagccggggg
     3541 gcgccgaact ggcggtgtac gctacccgct agccctgcgt cgcgctggcg ctcgccggcg
     3601 ggggcgaacc ggcggcggcg gtcgccacct gggtggcatc gtccgcggcc tggccgtcgc
     3661 gcttcatcag gtcgtcgatc tgggcgatgg tctgctggaa ggcatcgtcg tcctgggccg
     3721 gcagcgcgtg gtcgcgcggc agcttgacac tgagcgggtc gacgaaattg ccgttgatgc
     3781 ggatctcgaa gtggaggtgg ctgccggtcg aattgccggt cgagccgaca taaccgatga
     3841 tctggccctg ccgcaccttg tcgccgacct tgacgacgat cttgctctgg tggccgtagc
     3901 cggtctcgta gccgttgaca tgcttgagca tggtgaaatt gccgtagccg ttttcccagc
     3961 tggcgtgctc gacgatgccg tcgccggctg cgtagatcgg cgttccggtc ggcgaagcga
     4021 gatcgacgcc ggtgtgcagc aggcgggtgt ggaagatcgg gtggacgcgc cagccgaagc
     4081 ggctcgacag cgtgccgccg ccctgcagcg ggcgacgaat caggaagcgc ttgccggtct
     4141 cgccgttggg atcgtagaaa tcgacctgcg catcatcggt gcggaagcgg tagagctggt
     4201 gcatggtgga accaagtttc agcccgacgt agagcaggtc ctgcttgccg tcggtgtcct
     4261 tgggggtctc gagcacttcg atggaatcgc cgggcgtgat gcgcttggtc agatcgacgt
     4321 cgtaggcgta catggcgacg atccgcttgg tgacgtcgtc ggcgaggtcg tgcttgcgcg
     4381 cggtctccca gatggcgcga tagacggtcg gcaggttgga gacatcgacc tgctcgacgt
     4441 cctcggtggg gaaggtgatc tcggagggcg cgaggccgat gacgtaggtg ccgcggtcgg
     4501 tgagggccac ggtcacggcg tgcttgtcgg tgttgctggt gtcgtcgtgg acgtagatcg
     4561 acagccggta ggggatcagc gtgtcggagc tgcgcgaagg gccgaacagg attctaaggt
     4621 gggcgccggc cggcagcgtg ggctctggat agacgttctt gagcgtggtg ctgatggcgt
     4681 cgatcatctg ctgtgtaaag ccgttcttga gcagcatgtc ggcgaccttg atctggtcgt
     4741 ggacggtgag gatgcgctcg gagcggccga gcccggcctg gtcggcgggc gtggtcttgg
     4801 gcagcacggt gacgttctcg gcgacgccgc cgaggccgcc atcgacgatg cccagatcgt
     4861 gcagcgaggt gccctggtcg gcggcggcga cggtgccgtc gccggtgtcg gtgccgttgg
     4921 cgtcgacgtc atcgccggtc tcggtgtagg cgctgtcgac gagctggcgg acgaaggcct
     4981 cggccagctg gtcgtcgatg gcctgcggcg gcacgaaggt gtcgggcatg gcggtggtct
     5041 tgatctgcac ttcgccctcg accgcgccgc catagatgtc ggtgctggcg ctgtcgtcgg
     5101 gggccatgat cggctggctc tggtcgatca gcgacgacgg atcgtaggcc ggcacatcac
     5161 ccgagagtga ggttgcggtg gtcgccaggg tcgcgcggat gcggacgaag ggctgggtct
     5221 tgatcatgtc gcggccatcg accgattcct tgatcgaggc ttcgacgatc tcggtttccg
     5281 acttggtctg ggtcaccggt cggatacggt cggtcttgtt gatcaggtcg gcggtcggtc
     5341 cctgcgcgcc ggtgatgatc tgcagcgcct cgtaggcggt ggaaaaggtg ctctggccct
     5401 gaaagctcac atagagcgcg gcgcccatca gcagcaccga ggtcaagccg gtcatcaccg
     5461 tgccggtcag ccaggcaaag ctcaactcgc ggccctgcgg gatctcgccg tcggtcgagg
     5521 caaccgtcag cgccggccca tcctcgaagc cggcgcgcac cagagcgagc gagcgattgc
     5581 gttgcgccgg attcaccctc ggtcctgccc cagcccgttg tcgttgcccg gcctgccgga
     5641 acctgctgct ggcaggcctc tgtccggtcg cggccagtgt gcgcgcgccg ccgccgcggc
     5701 agcgaggccg aagcggggag tgttttggtc ggatcgaaat gcggcaagtt tccggccaat
     5761 gccaggccga tcggcggggg acttgcaaat tgtcggcttg tccccatcta accgtagcgg
     5821 acggacaagg gcaaagcccg gaaatccggg cgtttcggaa gggcgaaggc ggcgtttcgt
     5881 tttttgtcgg ttttgtcatc ttcgggtgtt gacagccaaa agggccagcc atataacccg
     5941 cctcgctgct gacgacggcc ttgcggcccg ggcagcaacg atttcttaaa agggcagata
     6001 tgctgccggg taaccggaag catcgttctg ttcccaaaaa tcaggaagcc ctgcttcctt
     6061 cgacgccgcc ctcgaaagag gttcccgggg tcagctcttt gacattgtga agatggaaga
     6121 aagggaaacg tggacggcga ggttcttgcg gtccggtcgt gagatcggac gaacagactt
     6181 cgacggtacg ttttctcaag aggtacacta ccaatcacgc gtgggttcgc ccgcgtagtg
     6241 acaggtgtgt gtcctcgtca atttgcatcg caagatgcaa gcgcaaaacg tgcagacgtc
     6301 gaccaagtca gatatcaaac ttgagagttt gatcctggct cagaacgaac gctggcggca
     6361 ggcttaacac atgcaagtcg aacgccccgc aaggggagtg gcagacgggt gagtaacgcg
     6421 tgggaatcta cccaatacta cggaatagct ccgggaaact ggaattaata ccgtatgtgc
     6481 cctacggggg aaagatttat cggtattgga tgagcccgcg ttggattagc tagttggtga
     6541 ggtaatggcc caccaaggcg acgatccata gctggtctga gaggatgatc agccacactg
     6601 ggactgagac acggcccaga ctcctacggg aggcagcagt ggggaatat
//
LOCUS       DATAZA010000434         6203 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3888339, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000434 DATAZA010000000
VERSION     DATAZA010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6203
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3888339"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..980)
                     /locus_tag="VHZ56_11045"
     CDS             complement(<1..980)
                     /locus_tag="VHZ56_11045"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HEX4298546.1"
                     /translation="MSFALAELLKGTGAKVPRLTVEGVNSDSRSIRAGEAFFAIPGIH
                     VHGDAFAAQAKAKGAAALVTDRAPGADPGMPVVVVPDVRAAYARAAAQQFSPQPEFVV
                     GITGTNGKSSIVSFVRQIWAACGFSAASIGTIGIETADGLLPGELTTPDALALHRDLA
                     SLGRRGIDHVAMEASSQGLDQRRVDGVRFSAVGFSNLSRDHLDYHADMDAYRAAKLRL
                     FTDLIAEGGAAVVNVDDPGYEPFMFAALNRGATLMTVGREGAWFENLSTVDEGYGQRV
                     TGRLVGEAVRFHLPLTGAFQASNAIVALGLAMATGAPQATALASLAQLKGA"
     gene            complement(1003..2709)
                     /locus_tag="VHZ56_11050"
     CDS             complement(1003..2709)
                     /locus_tag="VHZ56_11050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEX4298547.1"
                     /translation="MAAIEEGSLPIAVDGARKLRGHLTRLRIRWVILILLAMFAAVAG
                     RLIQLGMVVKENTIEGRALDLITATRPPLLDRNGLELAVDIRVPSLYAEPRRIIDVDE
                     AAQGIHSVLPDLSVDWLRQKLSGDKGFVWIKRELTPAIEDKIMDLGIPGLDFLTESKR
                     FYPVGREAAHIVGGVNIDNQGIAGMEKAVDDQDVALLQQVGLARGNNLTPVDLSIDLR
                     VQHVMHDVLADALTRYQASAAAGAMMDIKTGEILGLVSLPDFDPNQPGSALQTGSFNR
                     MTAGIYELGSTMKSVTIAGALDSGKVKITDSFDARYGVRFGRFTITDFHGKNRILSLP
                     EVYKYSSNVGAIHIMQQWGKENYRAFLTKMGFDTVEPLELPEKRMPVVPKVFSDIVAA
                     TAAFGHGLSVSPIAMLRAMGAFANGGVMVLPTMYKTSLEDAEKSYQQVVSPATSTKML
                     YLMRLNAVEGSGSRMNMLAAGYRPGGKTGTAEKVVNGRYDTSKVLSLFASVFPIDKPR
                     YAMMILVDDPHTEPGQGGHTAGWNAGEATGRIIAQVAPMLGISPDFDPMLDTNLVPPE
                     LR"
     gene            complement(2709..3086)
                     /locus_tag="VHZ56_11055"
     CDS             complement(2709..3086)
                     /locus_tag="VHZ56_11055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298548.1"
                     /translation="MIRSLNIIFVCTSICMLVGVYALKYSAEDVATEKVALQRQIDRQ
                     QADLSLLQADWSFLNQPANVAPIVNRHMAALNLQTLSQDEFGNFTTLPMRLKAPDNNA
                     LNALFQSLNSGVDPIQQLISESN"
     gene            complement(3083..4066)
                     /gene="rsmH"
                     /locus_tag="VHZ56_11060"
     CDS             complement(3083..4066)
                     /gene="rsmH"
                     /locus_tag="VHZ56_11060"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008592959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEX4298549.1"
                     /translation="MANRGASEQRAPHVPVLLAEVLAALAPLEGCRIVDGTFGAGGYS
                     RALLEAGASVVGIDRDPQVAPFAEALKAEFPNRFSFVAGAFAELDELAGPVDGVVLDI
                     GVSSMQLDEPGRGFSFMRDGPLDMRMAGEGETAAELVNGLDETALADLLFAYGEERKS
                     RRIAHSIVAARAARPIATTAELAQLIEKAIGRKPGDMHPATRSFQALRIAVNDEFGQL
                     VEGLFASERLLAEGGRLAVVTFHSLEDRIVKRFLEPDKAGPAQSRHLPQVVAEAHRWI
                     DVARAVKPSAAEIARNPRSRSALLRGARRSGVPARPVNLAGLGVPRFGGAA"
     gene            complement(4182..4580)
                     /gene="rnpB"
                     /locus_tag="VHZ56_11065"
     ncRNA           complement(4182..4580)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VHZ56_11065"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(4613..5329)
                     /locus_tag="VHZ56_11070"
     CDS             complement(4613..5329)
                     /locus_tag="VHZ56_11070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007198407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family molecular chaperone"
                     /protein_id="HEX4298550.1"
                     /translation="MASVWQRLGQIVGSASQRTGVVGSLANILDPDNWLPGGKDAAFT
                     LALIALSAKMAVSDGVVTASELRAFQRTVEIPPAIAQQVDRLFRLAQQDVAGYEAYAR
                     KIARFFAGSPETLEHVLDGLFYIASADGFIHEAELEYLKNVSDIFGFDDARFEQIAAQ
                     HVVLDTGVDPYVVLGLVPGADRNEVKRVYRRLVAEHHPDRLIAKGVPEELIDVATARM
                     QAINLAYSKIIKLPPPRPGA"
     gene            complement(5379..>6203)
                     /locus_tag="VHZ56_11075"
     CDS             complement(5379..>6203)
                     /locus_tag="VHZ56_11075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298551.1"
                     /translation="SADFFTGKIGDNKAAMLTSSTDALRPGATASQDEVKTAAVTSTL
                     TKTGVVITPDAASSSSVDPVQGYVDKGNALPDYITDASKPVAAAATSSSSAVAPVLAN
                     AVSSVPASPVLAKPDSAPVQVAAIDPAPPLVAPVPFPARPAELDRPVAALPSGPVVIV
                     DEPTQQQAALDQPPPVAQQAGPVPPADIVDDSSSWRNARLQRYLERNGLIDDASSDGR
                     SSASVTVVERPSDNYDPDGFYLNDGPNTSRAAARRARLDRLFDDDSDDDDSDYTVF"
BASE COUNT          946 a         2110 c         2144 g         1003 t
ORIGIN      
        1 gcgcccttga gttgcgccag cgacgccagc gccgtggcct gcggcgcccc ggtcgccatc
       61 gccagcccca gcgccacgat ggcgttgctg gcctggaacg cgccggtgag cggcaggtgg
      121 aagcgcaccg cttcgcccac cagccggccg gtgacgcgct ggccgtagcc ctcgtcgacg
      181 gtcgagaggt tctcgaacca ggcgccctcg cgtcccaccg tcatcagcgt cgcgccgcga
      241 ttgagcgcgg cgaacatgaa gggctcgtag ccggggtcgt cgacgttgac caccgcggcc
      301 ccgccctcgg cgatgaggtc ggtgaagagc cgcagcttgg cggcgcggta ggcgtccatg
      361 tcggcgtggt agtcgaggtg gtcgcggctg agattgctga agccgacggc gctgaaccgc
      421 acgccgtcga cgcggcgctg gtcgaggccc tggctcgagg cctccatcgc cacgtggtcg
      481 atgccgcgcc ggccgagcga cgcaaggtcg cgatgcagcg ccagcgcgtc gggcgtcgtc
      541 agctcgccgg gcagcagccc gtccgccgtc tcgatgccga tggtgccgat gctcgccgcg
      601 ctgaacccgc aggcggccca gatctggcgg acgaaggaaa cgatggacga tttgccgttg
      661 gtgccggtga tgccgacgac gaattcgggc tgcggcgaaa actgctgcgc cgccgcacgc
      721 gcataggcgg cgcgcacgtc cggcacgacc accaccggca tccccggatc ggcaccggga
      781 gcgcggtcgg tcaccagcgc cgcggcgccc ttcgccttgg cctgcgccgc gaacgcatcg
      841 ccgtgcacgt ggatgccggg aatggcgaag aacgcttcgc ctgcccgaat gctgcggctg
      901 tcggaattga ccccctcgac cgtcagccgc ggcaccttgg ccccggtgcc cttcagcagc
      961 tcggcgagtg cgaatgacac ggcgcgatcc tcgcgggtga agctagcgga gttctggggg
     1021 gacaaggttg gtatcgagca tcgggtcgaa atctggactg attcccagca tcggcgccac
     1081 ctgggcgata atgcggccgg tcgcctcgcc ggcgttccag ccggcggtat ggccgccctg
     1141 gccgggttcg gtgtgcggat cgtcgaccag gatcatcatc gcatagcgcg gcttgtcgat
     1201 ggggaacacc gaggcgaaca gcgacagcac cttcgaggtg tcatagcgcc cgttgacgac
     1261 cttctcggcc gtgccggtct tgccgcccgg acggtagccc gccgccagca tgttcatgcg
     1321 cgagccggac ccttcgacgg cgttgaggcg catcaggtag agcatcttcg tgctggtcgc
     1381 gggcgaaacc acctgctggt agctcttctc ggcatcctcg agcgatgtct tgtacatcgt
     1441 cggcagcacc atcacgccgc cattggcgaa ggcgcccatc gcccgcagca tggcgatcgg
     1501 cgacaccgac aggccatgcc cgaaggccgc cgtggcagcg acgatgtcgg agaacacctt
     1561 gggcaccacc ggcatgcgct tttcgggcag ctccagcggc tccaccgtat cgaaccccat
     1621 cttggtgagg aaggcgcgat agttctcctt gccccattgc tgcatgatgt ggatagcgcc
     1681 gacgttcgac gaatacttat acacttcggg cagcgataga attcggttct tgccgtggaa
     1741 gtcggtgatc gtgaaccgcc cgaagcggac gccgtagcgc gcgtcgaagc tgtcggtgat
     1801 cttgaccttg ccgctgtcga gcgcaccggc gatggtcacc gacttcatgg tcgagccgag
     1861 ctcgtagatg cccgccgtca tgcggttgaa gctgccggtc tgcagcgccg agccgggctg
     1921 gttcggatcg aaatccggca gcgacaccag cccgaggatt tcaccggtct tgatgtccat
     1981 catcgccccg gccgcggcgg aggcctggta gcgggtgagc gcgtcggcca gcacgtcgtg
     2041 catcacgtgc tgcacgcgca ggtcgatcga caggtcgacc ggcgtcagat tgttgccgcg
     2101 cgccagcccc acctgctgca gcagcgcgac gtcctggtcg tcgacggcct tctccatgcc
     2161 ggcgatgccc tggttgtcga tattgacgcc gccgacgatg tgcgccgcct cgcgaccgac
     2221 cgggtagaag cgcttgctct cggtgaggaa atcgagcccc ggaatgccga ggtccatgat
     2281 cttgtcttcg atcgccggcg tcagctcgcg cttgatccag acgaagccct tgtcgcccga
     2341 cagcttctgc ctgagccagt cgacgctgag atcgggcagc acggagtgga tgccctgcgc
     2401 cgcctcgtcg acgtcgatga tccggcgcgg ctcggcgtag agcgagggca ctctgatgtc
     2461 gaccgcgagc tcgagcccgt tgcggtcgag cagcggcggc cgggtcgcgg tgatgagatc
     2521 gagggcgcgg ccctcgatgg tgttctcctt gaccaccatg cccagctgga tcagccggcc
     2581 ggcaaccgcc gcgaacatcg ccagcaggat gaggatcacc cagcggatgc gcagccgggt
     2641 gagatggccg cggagcttcc gcgccccgtc gacggcaatc ggcaggctgc cttcctcgat
     2701 ggcggccatc agttcgactc cgagatgagc tgctggatcg ggtcgacgcc cgagttcagc
     2761 gactggaaca gcgcattgag cgcattgttg tcgggcgcct tgagccgcat cggcagcgtg
     2821 gtgaaattgc cgaactcgtc ctggctgagc gtctgcaggt tgagcgccgc catgtgccgg
     2881 ttgacgatcg gcgcgacgtt ggcgggctgg ttgaggaacg accagtcggc ctggagcagc
     2941 gacaggtccg cctgctgccg gtcgatctgg cgctgcagcg ccaccttctc ggtggcgacg
     3001 tcctcggccg aatatttgag cgcataaacc cccaccagca tgcagatgct ggtgcagacg
     3061 aaaatgatgt tgaggctccg gatcatgcgg cgcccccgaa ccgcggcacg ccgaggccgg
     3121 cgaggttcac cgggcgggcc ggtacgccgg agcggcgggc gccgcgcagc agcgccgagc
     3181 gggaccgcgg attgcgcgcg atctcggcgg ccgacggctt taccgcccgc gccacgtcga
     3241 tccagcgatg cgcctcggcg accacctgcg gcaggtgtcg cgattgtgcc gggccggctt
     3301 tgtccggttc gaggaagcgc ttgacgatgc gatcctcgag cgagtggaag gtgacgaccg
     3361 cgagccgccc gccctcggcc agcagccgct cggaggcgaa cagcccctcg accagctggc
     3421 caaactcgtc gttgaccgcg atgcgcagcg cctggaagct ccgcgtcgcg gggtgcatgt
     3481 cgccgggctt gcggccgatg gccttttcga tcagctgcgc cagctcggcg gtggtcgcga
     3541 tcggccgcgc cgcccttgcc gccacgatcg aatgggcgat gcgccgcgat ttccgttcct
     3601 cgccataggc gaacagcagg tcggcgagcg ccgtctcgtc cagcccgttc accagctcgg
     3661 cggcggtttc gccctctccc gccatccgca tgtcgagcgg cccgtcgcgc atgaacgaaa
     3721 atccgcggcc cggctcgtcg agctgcatcg acgacacgcc gatgtcgagg accaccccgt
     3781 cgaccggccc ggcaagctca tcgagctcgg caaaggcgcc ggccacgaag ctgaatcgat
     3841 tcggaaattc ggccttcagc gcttcggcaa agggcgccac ctgcggatcg cggtcgatgc
     3901 cgacgaccga ggccccggcc tcgagcaggg cgcgcgaata gccgcccgcg ccgaacgtgc
     3961 cgtcgacgat gcggcagccc tcgagcggcg ccagcgccgc cagcacctcg gccagcagca
     4021 ccggcacgtg cggtgctctc tgctcgctgg cgccccgatt ggccattggg aacatgactc
     4081 cacccggccg agacggccgg tacgcaatat ccccgcactt tgtccaagcg cggttgagaa
     4141 tccattaagc aaagatggcg gggcgccgcc gcagggagag aagtgccagt cgacctgtaa
     4201 gccgggttct gtagggccgg ccagcccacc ggcacgaagc cggaagactg accgacgtgg
     4261 cggccattcc tctgggaccc gccttgcggc gggcctcgag caaccaaccc ggatgacaag
     4321 cctcgaaaac cggccgggtt gccccgcgtc atccctattt ggtcttgctc ccggtggggt
     4381 gtgccgtgcc ggtcctgtcg ccaggcccgc ggtgcgctct taccgcaccc tttcaccctt
     4441 acccccggat cgagtccggg ggcggtctgc tctctgtggc actttccctg gggtcgcccc
     4501 cggcggctgt tagccgtcac cgtatttcga tggagcccgg actttcctcg ccttgtgggc
     4561 gcggccaccc ggtcaactgg ccggcgctat gtgcggggga tcgctccgcc agtcaagcgc
     4621 cgggacgcgg cggcggcagc ttgatgatct tgctgtaggc caggttgatc gcctgcattc
     4681 gcgccgtggc gacgtcgatc agctcctccg gcacgccttt ggcgatcagc cggtcgggat
     4741 gatgctcggc caccagccgc cggtagacgc gcttgacctc gttgcggtcg gcaccgggga
     4801 ccagtcccag cacgacgtag ggatcgacgc cggtatcgag caccacgtgc tgcgcggcga
     4861 tctgctcgaa ccgggcgtcg tcgaacccga agatgtcgct gacgttcttg aggtattcga
     4921 gctcggcctc gtggatgaag ccgtccgccg aggcgatgta gaacagcccg tcgagcacgt
     4981 gctccagcgt ctccgggctg ccggcgaaga agcgtgcgat cttgcgggcg taggcctcgt
     5041 agccggccac gtcctgctgc gcgagccgga acagccggtc gacctgctgc gcgatcgcgg
     5101 gcggaatctc gacagtgcgc tggaatgccc gcaactcgga cgcggtgacc accccgtccg
     5161 acaccgccat cttggccgac agggcgatca gcgcgagcgt gaaagcggca tccttgccgc
     5221 ccggcaacca gttgtcgggg tcgagaatat tggccagcga accgacgacg ccggtgcgct
     5281 ggctggccga ccccacaatt tggccgagcc gttgccagac cgacgccatc gcctgctccg
     5341 tttgcggcgc ggacatatac gcgcgcgccg ctacggggtc aaaagacggt gtagtcgcta
     5401 tcgtcgtcgt cgctgtcgtc gtcgaacagc cgatcgagcc gggcccggcg cgcggcggcc
     5461 cgggaggtgt tcggcccgtc gttgagataa aagccatccg gatcgtagtt gtccgacggc
     5521 cgctcgacga ccgtcaccga ggcgctgctg cggccgtccg acgatgcatc gtcgatcagc
     5581 ccgttccgct cgagatagcg ctgcagccgg gcattccgcc agctgctcga atcatcgacg
     5641 atgtcggccg ggggcaccgg gccggcctgc tgcgcaaccg gcggcggctg gtcgagtgcc
     5701 gcctgctgct gtgtcggctc gtcgacgatc acgaccgggc cggacggcag cgctgccacc
     5761 ggccggtcga gttccgccgg ccgcgccggg aatggcaccg gcgcaacgag cggcggcgcc
     5821 ggatcgatgg cggccacctg gaccggggcg gagtcgggct tggccagcac cggcgaggcc
     5881 ggcacgctgc tcaccgcatt ggccagaacc ggcgcgacgg cgctgctgct cgacgtcgcc
     5941 gcggccgcca ccggcttcga cgcgtcggtg atgtagtcgg gcagcgcgtt gcccttgtcg
     6001 acgtaaccct gcaccgggtc gacggaggag gacgaagcgg cgtcgggggt gatgacgacg
     6061 ccggtcttgg tcagcgtcga ggtcaccgca gcggtcttga cctcgtcctg cgaggcggtc
     6121 gcgccgggtc ggagcgcatc cgtcgaggag gtcagcatgg cggccttgtt gtcaccgatc
     6181 ttgccggtga agaagtctgc cga
//
LOCUS       DATAZA010000435         1617 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_870877, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000435 DATAZA010000000
VERSION     DATAZA010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_870877"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(222..650)
                     /locus_tag="VHZ56_11080"
     CDS             complement(222..650)
                     /locus_tag="VHZ56_11080"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEX4298552.1"
                     /translation="MMPAPAPATTQGALSGYTTVDTDQLATKIIGQPVYDGTDAKADN
                     LGNISDLVVNKDGSIAAVVVGVGGFLGIGQKQVAVNFTSLQLTVAADNTKRFVIQTTK
                     DELTSAPDFKTVDTTPSQAASDMSTSSLAVDQTMSSSSAM"
     gene            661..870
                     /locus_tag="VHZ56_11085"
     CDS             661..870
                     /locus_tag="VHZ56_11085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298553.1"
                     /translation="MLEAVDICDDIAELSIADDIAGADDIDESIIIEESDDIAGADDI
                     DESIIIEESDGMADDIIADDDASWA"
     gene            1083..>1617
                     /locus_tag="VHZ56_11090"
     CDS             1083..>1617
                     /locus_tag="VHZ56_11090"
                     /inference="COORDINATES: protein motif:HMM:NF015286.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine dehydratase beta chain"
                     /protein_id="HEX4298554.1"
                     /translation="MFLSIFDIFKVSVGPSSSHTMGPMLAAGRFIGLASRLALPEGRL
                     SLGCRLYGSLAYTGEGHGTIRAVLCGLLGLQPQSYDRATADAELAGLARSGTVRLPNG
                     RVIGLPPEAVRVEKGARLPAHPNGMTFFLADADGTEILAESYYSIGGGFVLTADEMAA
                     GPAMAGAEDVPYPFANAA"
BASE COUNT          261 a          514 c          562 g          280 t
ORIGIN      
        1 atggccacaa ggtgcgtcgc ggtccgatcg tagtggtcgc gctcgacggt ctcgggaacg
       61 ctctgctcga tgatgaagac cgcgcgccgg agcgcgagac caagccggcc gaggtcggag
      121 tcgacgggga cggcgaggat cagcaggtca gacataaggg ctcccgaaac gggagccctt
      181 agatcacagc ggcggccgaa cggccactcc gccggaaggc gctacatcgc cgagctgctc
      241 gacatggtct ggtcgaccgc cagcgaactc gtcgacatgt cgctcgccgc ctggctgggc
      301 gtggtgtcga cggtcttgaa gtcgggggcg ctggtcaact cgtccttggt ggtctggatc
      361 acgaagcgct tggtgttgtc ggccgccacg gtcagctgca gcgaggtgaa gttcaccgcg
      421 acctgcttct ggccgatgcc gaggaagccg ccgacgccaa cgaccacggc ggcgatgctg
      481 ccatccttgt tgaccacgag atcgctgatg ttgcccagat tgtcggcctt ggcgtcggtg
      541 ccgtcataca ccggctggcc gatgatcttg gtcgcgagct ggtcggtatc caccgtggta
      601 tagcccgaaa gggcgccctg ggtagtcgcc ggagcgggcg cgggcatcat cgaggattcc
      661 atgctcgagg cggtcgacat ctgcgacgac atcgccgagc tttccattgc cgacgacatc
      721 gccggcgctg acgacatcga cgaatccatc atcatcgagg agtccgacga catcgccggc
      781 gccgacgaca tcgatgaatc catcatcatc gaggagtccg acggcatggc cgacgacatc
      841 atcgccgacg atgatgcatc ctgggcataa gcggtcgagg tcagcagcac ggcgagcagg
      901 gcggtggcca gcagcgggcg ggtcattgta ttctccttgg gttcaatcat gttggacttg
      961 ccgcgcgccg aacctgttgg ggacgctgcg cgcggctctc ggggcctcaa cgtctcgcgc
     1021 gttggcgtgt tccgcagttt tatcgccggc ggcgaaccag ccgtcggggc caggaggatc
     1081 aggtgttcct gtcgatcttc gacatcttca aggtcagcgt cgggccgtcc tcgtcgcaca
     1141 ccatgggtcc gatgctggcc gcgggacggt tcatcggcct cgcctcgcgc ctcgcgctgc
     1201 cggaaggacg gctgtcgctc ggctgccgcc tctacggctc gctcgcctat accggggagg
     1261 ggcacggcac gatccgggcg gtgctgtgcg gcctgctcgg gctgcagccc cagagctacg
     1321 accgcgcgac cgccgacgcc gagctggcgg ggctggcgcg atcgggaacc gtgcggttgc
     1381 cgaatggccg ggtcatcggc ctgccgccgg aagccgtacg ggttgaaaag ggcgcgaggt
     1441 tgccggcgca tccgaatgga atgacattct tcctggcgga tgcagacggc accgagatcc
     1501 tcgctgaaag ctactactcg atcggcggcg gcttcgtgct caccgccgac gagatggccg
     1561 ccgggccggc catggccggt gccgaggatg tgccctatcc gttcgccaac gccgccg
//
LOCUS       DATAZA010000436         6846 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1103866, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000436 DATAZA010000000
VERSION     DATAZA010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6846
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1103866"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(129..1403)
                     /locus_tag="VHZ56_11095"
     CDS             complement(129..1403)
                     /locus_tag="VHZ56_11095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003534624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuconate dehydratase"
                     /protein_id="HEX4298555.1"
                     /translation="MMRIVSLKIYDLRFRTSAALDGSDAMNPDPDYSAAYVVLETDGP
                     HQGHGLSFTIGRGNEVVCAAIRALEPLVAGLDVDWIAESPGRFWRRVTGDSQLRWIGP
                     DKGAMHLATGAVVNAAWDLLAKLAGQPVWRLVSAMTPEQLVACIDFRYLTDAITPDEA
                     LAIFRRAEPGKAGRIAELEAHGYPCYTTSAGWLGYSTEKLTRLATEAVAQGFSHIKMK
                     VGRDLADDIRRLEIVRRIIGPERRLLIDANQVWEVDEAIGWVNALKRFDPYFIEEPTS
                     PDDVEGHRTIRAAVAPVKVATGEMCQNRILFKQFITRGAIDIVQIDACRIGGLNEVLS
                     VLLLAAKYGLPVWPHAGGVGLCEYVQHLSMIDYVAVSGSKDGRVIEYVDHLHEHFLDP
                     CVIRNAAYMPPARPGFSIEMKPDSIRDNQFRG"
     gene            1545..2369
                     /locus_tag="VHZ56_11100"
     CDS             1545..2369
                     /locus_tag="VHZ56_11100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018064041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX4298556.1"
                     /translation="MRIVDTHLHLIYLDKFSYPWLAGVPPLNRQWDAPSYFAEAEKLG
                     IEAALHMEVDVPAREMEDETQFVLGLDRRVVGAISNARPEHVDFPGHLERIAADPRIK
                     GIRRLLQSDPDQLSEGEVFRSNLRRLAAHRLSFDICVQARQLPIARALVAACPDVQFV
                     LDHCGNPPIATGDLATWRANIRALAELPNVAGKVSGIVNNARPGWTAADLRPVVEHMV
                     ACFGWDRVVWGSDRPVVTLNGTLTQWVEAAKAIVAGASGDEQRRLFSANAERIYRI"
     gene            complement(2394..4289)
                     /locus_tag="VHZ56_11105"
     CDS             complement(2394..4289)
                     /locus_tag="VHZ56_11105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015319089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4298557.1"
                     /translation="MTTAEDVEIDEEDRSRRPSKAVVGSHREEEEVFGKAYDPRIVRR
                     MWSFVRPYRSRIAISVASVLVFTLTQLAIPMIIRFAIDNGMVPGSDGHALLWYVAAFG
                     VVIAINYGASYLQESVVGKVAEHVLFDIRRAMMDRLQRVALGFMDKTEVGRLMSRLQG
                     DVNSMQEFLETSVMSVGDIVLLVGIVVTLLALDVRLGLLTLATMPTLLVIRFFWLPPA
                     KRSFMAAHETNSIANGALAEGINGVRTVQSLNRQRVNFDLYDEKANKNLKAHLRAAKF
                     AQVTVPIVDTLTGISMATVVVVGGQMVMSHQLGLGVMVAFLFYIQRFFDPIRSLTMQY
                     SVMQRAMASGERISEVLDVPVDIADKPDAVELGPDMDGSVEFRNVTFGYRKNQPVLKN
                     VSFAVKPGETVALIGPTGSGKTSSMALVHRFYDVWDGQVVVGGHDVRDVTQHSLGTSI
                     AMVLQEPFLFTGTVIENIRYARTEATLEQVVEAAKAVGAHDFIMRLPDGYDSKLEQRG
                     GNLSLGQRQLLSFARALVADAKILVLDEATASIDSYTELQIQKALAVLLKGRTGLVIA
                     HRLATIRGADRILVLQNGVLIESGNHDQLMGQRGLYAKLYNMNYSSFDDIPEDAIPQV
                     AEVGTAT"
     gene            complement(4291..6147)
                     /locus_tag="VHZ56_11110"
     CDS             complement(4291..6147)
                     /locus_tag="VHZ56_11110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013530490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4298558.1"
                     /translation="MSTDRASAKRRANAFSHVAKASWGKGVGALWRIMRLNLRHPWQV
                     AMCIAATFIAATLQLLIPRLLGHAVDQAQGVLGGTGAGAAAQQALWSTAVLLLVLSIA
                     RGLFTLLQNYYSESVGHFAAYELRLACYEKLQQLSFSFHDRMHSGDLITLGILDIDGV
                     RMFFATGLVRMVLLAVLIGVGAYLLISTDVLLGLLSLSFVPFVGWRSSVVQLKLRATW
                     LELQDRLTVMSRVMDENLGGIRVVRAFAAQDHEMAKFDAASQDAIELAHERVDLRVSS
                     TAMMNFSFFLAMGLVLWFGGQKVMAGDITVGTLAAFLTFMTILQMPVRQLGLMVNSFA
                     RASTCGIRLFNLLDLDLAVQDRPAAPEIKVTEGTLRFDHVSFRYPGTTHDVLKDVSFV
                     AKRGETIAFVGPPGSGKSTLVHLIPRYYDVGSGSITIDGQNVAEVTLDSLRRKVAVVQ
                     QDSFLFTTTIENNIAYGNPWAKERRIERAAESAQLHNYVAGLPAGYDTIVGERGVSLS
                     GGQRQRLTIARSLVLKPAVMVFDDSTAAIDAATEQRIRLAMRRYAEGRVTIIISHRLS
                     SLMHADQILFIEDGKILERGSHLELLARGGRYRALYDLQVRPETDAPRMAGE"
     gene            complement(6281..>6846)
                     /locus_tag="VHZ56_11115"
     CDS             complement(6281..>6846)
                     /locus_tag="VHZ56_11115"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HEX4298559.1"
                     /translation="SRVAMRWFALFVPLLFAVLSGCAMNRVTAYNTVVPAQYTLDTGD
                     VVRVTVYGDTTLTNTYTVTDKGTLSLPLAGEVAVRGEAITAVEQQITTLLARGYMINP
                     KVSVEITTYRPFFIEGAVKTSGQFPYVYGMTARAAVATAGGFADYADRGRVTVYRRVG
                     GVMTKRTIGLDDTVLPGDTIVINERWL"
BASE COUNT         1215 a         2330 c         2153 g         1148 t
ORIGIN      
        1 tagccgcctt cgacataggt ccggacatag gcctccgggt cgccgtgata ggcaacgtcg
       61 tagcgcccga gcttgatcga catgctttcc tcctgctccc ggaaagaggg agcccgcgcc
      121 gtgaactgtc aaccccggaa ctggttgtcc cggatggagt ccggcttcat ctcgatcgaa
      181 aagcccggac gcgctggcgg catgtaggcc gcgttgcgga tgacgcacgg atcgaggaag
      241 tgctcgtgca ggtgatcgac atactcgatc acccggccat ccttgctgcc actgaccgcc
      301 acatagtcga tcatcgacag atgctgcacg tattcgcaga gcccgacgcc gccggcgtgc
      361 ggccagaccg gcagcccgta tttcgcggcc agcaacagca ccgacagaac ctcgttgagg
      421 ccaccgatgc ggcaggcgtc gatctgcacg atatcgatcg cgccgcgggt gatgaactgc
      481 ttgaacagaa tccggttctg gcacatctcg ccggtcgcaa ccttgaccgg cgccaccgcc
      541 gcgcggatcg tccggtgccc ctcgacgtca tcgggactgg tcggctcctc gatgaaatac
      601 ggatcgaaac gcttcagcgc gttgacccag ccgatcgcct cgtccacctc ccacacctga
      661 ttggcgtcga tcagcagccg gcgctcgggc ccgatgatcc ggcggacgat ctccagccgc
      721 cggatatcgt ccgcgaggtc gcgcccgacc ttcatcttga tgtgcgagaa gccctgcgcc
      781 accgcttcgg tcgcaagtcg cgtcagcttc tcggtggaat agcccagcca gccggcggaa
      841 gtggtgtagc agggatagcc atgggcctcg agttcggcga tgcgcccggc cttgcccggc
      901 tcggcgcgtc ggaagatcgc cagggcctca tccggcgtga tggcgtcggt gagatagcgg
      961 aagtcgatgc aggcgacgag ctgctccgga gtcatcgccg acaccagccg ccagaccggc
     1021 tggcccgcga gctttgcgag gaggtcccag gcggcattga ccaccgcgcc ggtcgcgagg
     1081 tgcatcgccc ccttgtcggg cccgatccag cgcaactggc tgtcgcctgt cacgcgccgc
     1141 cagaaccggc cgggactctc ggcgatccag tcgacatcga gccctgcgac caacggctcc
     1201 agcgcccgga tcgcggcaca gaccacctcg ttgccgcgcc cgatggtgaa actgagccca
     1261 tgcccctggt gcgggccgtc cgtctcgaga accacatagg cggccgaata gtcgggatcg
     1321 gggttcatcg cgtcggagcc atcgagggcc gccgacgtcc ggaaccgcaa gtcataaatc
     1381 ttgagtgaaa cgatacgcat caggcccccg ccgatccttg ctcatcctta cgtgaacatt
     1441 gtattcgttg gtagacccgg tcggcgccac tcgtgatccg tccccggctg gtgtcgcacc
     1501 ggacatgacg caagtcgcca cccgctcgct ttcaaggccc cgacatgcgc atcgtcgaca
     1561 cccacctgca cctcatctac ctcgataaat tctcgtaccc ctggctcgcc ggcgtgccgc
     1621 cgctcaatcg ccagtgggat gctccgagct atttcgccga agccgaaaag ctggggatcg
     1681 aggcggcatt gcacatggag gtcgatgtgc ccgcgcgcga gatggaggac gagacgcagt
     1741 tcgtgctcgg cctcgatcga cgggtggtgg gggcgatttc caacgcccgg cccgagcacg
     1801 tcgattttcc cgggcacctc gagcggatcg ccgccgaccc gcgcatcaag ggcatccgcc
     1861 ggctgctgca atccgacccc gaccagttgt ccgagggcga ggtttttcgc agcaacctcc
     1921 ggcggctcgc ggcgcaccgg ctaagcttcg acatctgcgt gcaggcgcgc caattgccga
     1981 ttgcccgtgc cctcgtcgcc gcttgcccgg acgtgcagtt cgtgctcgac cattgcggca
     2041 atccgccgat cgccacgggc gacctcgcga cctggcgcgc caacatccgc gccctcgcgg
     2101 aattgcccaa tgtcgccggc aaggtctccg gcatcgtcaa caacgcgcgc ccgggctgga
     2161 cagcggccga cctccgtccg gtggtcgaac acatggtcgc ctgcttcggc tgggaccgcg
     2221 tcgtgtgggg atcggaccgg ccggtggtca ccctcaacgg caccctgacg caatgggtcg
     2281 aggccgccaa ggcgatcgtc gccggtgcca gcggcgacga acagcgccgg ctgttttccg
     2341 ccaacgccga gcggatctat cgcatctagc tggtatacga gcggcggaga cgcctaggtc
     2401 gccgtgccga cctcggcaac ctgcgggatc gcgtcctccg gaatatcgtc gaagctggaa
     2461 tagttcatgt tgtagagctt ggcgtagagg ccgcgctggc ccatcagctg gtcgtggttg
     2521 ccgctctcga tcagaacgcc attctgcagc accaggatgc gatcggcgcc gcggatcgtc
     2581 gcgagccggt gcgcgatgac gaggccagtg cgacccttca gcagcaccgc gagggccttc
     2641 tggatctgca gttccgtata gctgtcgatc gacgccgtcg cttcgtcgag aacgaggatt
     2701 ttcgcatccg cgaccagcgc ccgcgcgaaa ctgaggagct gccgctggcc gagtgacaga
     2761 ttgccgccgc gctgctcgag cttgctgtcg tacccatccg gcaaccgcat gatgaaatcg
     2821 tgcgcgccga cggccttcgc cgcctcgacc acctgctcca gcgtcgcctc ggtccgcgcg
     2881 taacggatgt tctcgatcac cgtccccgta aacaggaaag gctcctgcaa caccatggcg
     2941 atcgacgtgc cgagcgagtg ctgggtcacg tcgcgcacgt cgtggccacc gaccacgacc
     3001 tggccgtccc acacatcgta gaagcgatgc accagcgcca tcgagctggt cttgccggag
     3061 ccggtcggcc cgatcagcgc caccgtctcg ccgggcttga ccgcaaagct cacattcttc
     3121 agcaccggct ggttcttgcg gtagccgaag gtgacgttgc ggaactcgac cgagccgtcc
     3181 atgtcgggac cgagctcgac tgcatccggc ttgtcggcaa tgtcgaccgg cacgtcgagc
     3241 acttccgaga tgcgctcgcc cgaggccatg gcgcgctgca tcaccgaata ctgcatggtg
     3301 agcgagcgga tcgggtcgaa gaagcgctgg atgtagaaca ggaacgccac catgacgccg
     3361 aggccgagct ggtggctcat caccatctgg ccgccgacca cgacgaccgt cgccatcgag
     3421 atgccggtca gcgtgtcgac gatgggcacc gtcacctgcg cgaacttcgc cgcgcgcagg
     3481 tgggccttca ggttcttgtt cgccttctcg tcgtagaggt cgaaattgac ccgctggcga
     3541 ttgaggctct gcaccgtgcg cacgccgttg atgccttcgg ccagcgcccc gttggcgatc
     3601 gaattggtct cgtgcgccgc catgaagctg cgcttggccg gcggcagcca gaagaagcgg
     3661 atgaccagca gcgtcggcat ggtcgcaagg gtcagcagcc ccagccggac gtcgagggcc
     3721 agcagcgtaa ccacgatgcc gacgagcagc acgatgtcgc ccaccgacat caccgaggtc
     3781 tcgaggaact cctgcatgga gttgacgtcg ccctgcaggc gcgacatcag ccggccgact
     3841 tcggtcttgt ccatgaagcc gagcgccacc cgctgcaggc ggtccatcat cgcccgccgg
     3901 atatcgaaca gcacgtgctc ggccaccttg ccgaccaccg attcctgcag gtagctggcg
     3961 ccatagttga tggcgatcac cacgccgaag gccgcgacgt accagagcag ggcatggcca
     4021 tcgcttcccg ggaccatgcc gttatcgatg gcgaagcgga tgatcatcgg gatcgccagc
     4081 tgggtcagcg tgaacaccag caccgaagcc accgaaatcg cgatccggct gcggtacggg
     4141 cgcacgaagc tccacatccg gcgcacgatg cgcgggtcgt aggccttgcc gaagacttcc
     4201 tcttcctcgc ggtgcgagcc gaccaccgcc ttggatggcc gccggctgcg gtcttcctcg
     4261 tcgatctcga cgtcttcggc agtggtcatc ctattctccc gccatccgcg gcgcatcggt
     4321 ttccggccgt acctgcaggt cgtacagcgc ccggtagcgc ccgcctcgcg ccagcagctc
     4381 cagatgcgaa ccgcgttcca ggatcttgcc gtcctcgatg aacaggatct ggtcggcatg
     4441 catcagcgag ctcagccgat gcgagatgat gatcgtcacc cgcccctcgg cgtagcgacg
     4501 catggcgagc cggatgcgct gctccgtcgc cgcatcgatg gccgcggtcg aatcgtcgaa
     4561 caccatgacc gccggcttca gcacgaggct gcgcgcgatc gtgagccgct gccgctgccc
     4621 gccgctgagc gacacgccgc gctcgcccac gatggtgtcg tagcccgccg gcagccccgc
     4681 cacgtagttg tggagttgcg ccgattccgc cgcgcgctcg atgcgccgtt ccttggccca
     4741 cggattgccg taggcgatgt tgttctcgat cgtggtggtg aagaggaacg agtcctgctg
     4801 caccacggcc accttccggc gcagcgaatc cagggtcacc tcggcgacat tctgcccgtc
     4861 gatggtgatg ctgccgctgc cgacgtcgta gtagcgcggg ataaggtgca ccagtgtcga
     4921 cttgccgctg cccggcgggc cgacgaaggc gatggtctcg ccccgcttgg ccacgaagct
     4981 gacatccttg agcacgtcgt gcgtggtgcc gggatagcgg aagctgacgt gatcgaaacg
     5041 cagcgtgccc tcggtgacct tgatctccgg cgctgccggt cgatcctgca ccgccaaatc
     5101 gaggtcgagc aggttgaaca accggatacc gcaggtcgag gcacgggcga aggaattgac
     5161 catcagccca agttgccgca ccggcatctg caggatcgtc atgaaggtga ggaacgcggc
     5221 gagcgtgcca accgtgatgt cgcccgccat caccttctgc ccgccgaacc acagcaccag
     5281 tcccatggcg aggaagaatg aaaagttcat catcgccgta ctgctgacgc gcaggtcgac
     5341 gcgctcatgc gcgagctcga tcgcatcttg cgaggcggcg tcaaatttcg ccatctcgtg
     5401 gtcctgtgcg gcaaacgccc ggaccacgcg gatgccgccg agattctcgt ccatcacccg
     5461 cgacatcacc gtcagccggt cctgcagctc gagccaggtg gcgcgaagct tcagctgcac
     5521 caccgacgag cgccagccga cgaagggcac gaagctgagg ctgagcagcc ccagcagcac
     5581 gtcggtcgag atcagcaggt aggcccccac cccgatcagc acggcaagca gcaccatgcg
     5641 caccaggccg gtcgcaaaga acatccggac gccgtcgata tcgaggatgc ccagggtgat
     5701 caaatcgccc gaatgcatcc ggtcatggaa cgagaagctc agctgctgca gcttctcgta
     5761 gcaggcgagc ctgagctcgt aagccgcgaa atgcccaacc gattcgctgt agtagttctg
     5821 cagcagcgtg aacaggccac gggcgatgct gagcaccaga agcagcaccg ccgtcgacca
     5881 cagcgcctgc tgcgccgcgg ctccggcccc ggtaccgccc agaactccct gcgcctggtc
     5941 cacggcgtga ccgagcaagc gcgggatcaa caattgcaag gtggcggcga tgaaggtcgc
     6001 ggcgatgcac atcgccacct gccagggatg ccgcaggttg aggcgcatga tgcgccagag
     6061 cgcacctaca cccttccccc agctcgcctt tgcgacgtgg gaaaatgcgt tggcgcgcct
     6121 tttggcgctg gcccggtcgg tgctcacggg aaaagtccag aaatctgatg tgcccgcgac
     6181 tgcccgggcc agagcgggcg atagaggcgc ccgagtcact gaaatgttag gacatcagcg
     6241 cttggatttc aacgccgttt ccgcccgagc cgctttctat tcaaagccag cgttcgttga
     6301 tcacgatggt atcgcccggc agcacggtgt cgtcgaggcc gatcgtccgc ttcgtcatta
     6361 ccccgccgac gcggcggtag acggtgacgc gcccgcggtc ggcatagtcc gcaaatcccc
     6421 ccgccgtcgc caccgcggcc cgcgcggtca tcccgtagac atagggaaac tggccgctcg
     6481 tctttactgc gccctcgatg aagaacgggc ggtaggtggt gatctcgacc gagaccttgg
     6541 gattgatcat gtagccgcgc gccagcagcg tcgtgatctg ctgctcgacc gccgtgatcg
     6601 cctcgccgcg gacggcaact tccccggcga ggggcagcga cagggtgccc ttgtcggtga
     6661 ccgtgtaggt gttggtgagg gtggtgtcgc cgtacacggt gacacgcacc acgtcgccgg
     6721 tgtcgagcgt gtactgcgcc ggcacaacgg tgttgtaggc cgtaacccgg ttcatcgcac
     6781 agccgctcag cacggcgaac agcagcggca cgaacaacgc aaaccaacgc atggcaactc
     6841 tcgacg
//
LOCUS       DATAZA010000437         3722 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3773453, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000437 DATAZA010000000
VERSION     DATAZA010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3722
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3773453"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2000)
                     /locus_tag="VHZ56_11120"
     CDS             complement(<1..2000)
                     /locus_tag="VHZ56_11120"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEX4298560.1"
                     /translation="MLEKTYEPGAVEGRIYQAWQDTGAFKAGAGAKPGAETFTIVIPP
                     PNVTGSLHIGHALNNTIQDILVRYNRMRGKDVLWQPGTDHAGIATQMIVERQLMERQE
                     PSRREMGREKFLERVWAWKAESGGTILNQLKRLGASADWSRERFTMDEGLSAAVRKVF
                     IELYQKGLIYRAKRLVNWHPGLETAISDLEVENIETQGKMWHLSYPIENSSESIVVAT
                     TRPETMLGDVAVAVNPDDPRYKNVIGRHAILPIVGRRIPIIADAYADPEMGSGAVKIT
                     PAHDFNDFEVGQRHNLKPINIFTTSARINAHAPKEFRGLDRFEARQKVLDMLEDIGAV
                     LWVEDKKIMVPHDEKTKQVIIEPFLTDQWFVNAEVLAGPALASVREGRTRFVPQSWEN
                     TYFSWMENIKPWCISRQLWWGHQIPAWYGPRLHSDPEFGRADAGPKIFVAATEEQARK
                     DALAYYGRQVEVHTSGLGSTSFQKAMTDFETTQRDRQNPGVWASRKAADPFAELSDSK
                     VPLHRDEDVLDTWFSSALWPFSTLGWPEQTPEVSRYYPTDVLVTGFDIIFFWVARMMM
                     MGLEFMKTEPFHTVYVHALVRDEAGLKMSKTKGNVIDPLELVDEYGADATRFTLAAMA
                     AQGRDMRLALSRVEGYRNFVTKLWNAARFLEMNGCVRRAGFDP"
     gene            complement(2120..2818)
                     /locus_tag="VHZ56_11125"
     CDS             complement(2120..2818)
                     /locus_tag="VHZ56_11125"
                     /inference="COORDINATES: protein motif:HMM:NF022155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2497 domain-containing protein"
                     /protein_id="HEX4298561.1"
                     /translation="MNKPATKEPSMDEILSSIRQIIADDDAAAAPQPEPRPPAAPVVP
                     APRPAAAAPLPLSPAQIVPSRPAPAPQQVPVPEPASANFSSAFDDEADAADVSEPMAA
                     MLASEPELVDPEDVAFESEPEPPPAMRSVPPSAPRSPRPAISVAQAAPMPDASLSADL
                     AAELLAPATNAAVQGTMSRLSAIATVGGGQTIEGLMRDMMRPMLKEWLDENLPALVER
                     VVEKEIARISRGVK"
     gene            complement(3012..>3722)
                     /locus_tag="VHZ56_11130"
     CDS             complement(3012..>3722)
                     /locus_tag="VHZ56_11130"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEX4298562.1"
                     /translation="TSTFNVGTLMPKTLDRAIAEATTDNPAILSAKAAIRASQANSDA
                     ANAAFGPTLAMTGSIGSTLFGPATSSGPSTPTPHTSVGLTLSVPIYAGGKLGASIRKA
                     NITQIKSEVDALSASDQIKQATITAWSTLQNAVAQITSANAAVSAGNLSLQGTEQERD
                     VGQATTLDVLNAQSDLESVQESLIQANASKAIATFALVAATGHLTAADLNLPVEVKTG
                     EDYIAKVEDVWAELRALD"
BASE COUNT          552 a         1290 c         1206 g          674 t
ORIGIN      
        1 ggatcgaagc cggcccggcg gacgcagccg ttcatctcga ggaagcgagc ggcgttccac
       61 agcttggtga cgaagttgcg gtagccttcg acccggctga gcgcgagccg catgtcgcgg
      121 ccctgcgccg ccatcgcagc cagcgtgaag cgcgtggcat cggccccgta ctcgtcgaca
      181 agctcgagcg gatcgatgac gttgcccttg gtcttgctca tcttgagccc ggcctcgtca
      241 cgcaccagcg cgtgcacgta caccgtgtgg aacggctccg tcttcatgaa ctcgaggccc
      301 atcatcatca tccgggccac ccagaagaag atgatgtcga accccgtcac cagcacgtcg
      361 gtcgggtaat agcgggagac ctcgggcgtc tgctccggcc agcccagcgt cgagaacggc
      421 cacagcgccg acgagaacca ggtgtcgagg acatcctcgt cgcggtgcag cggcaccttc
      481 gagtcggaca gctccgcaaa cgggtccgcc gccttgcgcg acgcccacac gccgggattc
      541 tggcggtcgc gctgcgtcgt ctcgaaatcg gtcatcgcct tctggaacga cgtcgatccg
      601 aggcccgaag tatgaacctc gacctgccgc ccgtagtacg cgagggcatc cttcctggcc
      661 tgctcctcgg tcgccgcgac gaagatcttc gggcccgcat ccgcccggcc gaactccggg
      721 tcgctatgca gcctcggccc ataccaggcc gggatctggt ggccccacca gagctggcgc
      781 gagatgcacc acggcttgat gttttccatc cacgaaaaat acgtgttctc ccagctctgc
      841 ggcacgaacc tggtgcgccc ctcgcgcacc gacgccagcg ccggcccggc aagtacctcg
      901 gcgttgacga accactggtc ggtaaggaac ggctcgatga tgacctgctt ggtcttctcg
      961 tcgtgcggca ccatgatctt cttgtcttcg acccacagca ccgcgccgat gtcctcgagc
     1021 atatcgagca ccttctggcg cgcctcgaag cggtcgagcc cgcggaattc cttcggcgcg
     1081 tgggcgttga tccgcgcgct cgtggtgaag atgttgatcg gcttcaggtt gtgccgctgc
     1141 ccgacctcga aatcgttgaa gtcgtgcgcc ggggtgatct tcaccgcgcc cgatcccatc
     1201 tccgggtcgg cataggcgtc ggcgatgatc gggatgcgcc ggccgacgat cggcaggatg
     1261 gcatggcggc cgatgacgtt cttgtagcgc ggatcgtccg ggttcacggc gaccgcgacg
     1321 tcgcccagca tggtctcggg ccgcgtcgtc gccaccacga tcgactccga ggagttctcg
     1381 atcggatagc tcagatgcca catcttgccc tgtgtctcga tgttctcgac ttcgaggtcc
     1441 gagatcgccg tctcgaggcc cggatgccag ttcaccagcc gcttggcgcg atagatcagt
     1501 cccttctggt acagctcgat gaacaccttg cggaccgcgg cgctgagccc ctcgtccatg
     1561 gtgaaacgct cgcgcgacca gtcggccgac gcgccgagcc gcttcagctg gttgaggatc
     1621 gtgccgccgc tctcggcctt ccacgcccac acccgctcga ggaatttttc gcgccccatc
     1681 tcccggcgcg acggctcctg ccgctccatc agctgccgct cgacgatcat ctgcgtggcg
     1741 atgccggcgt ggtcggtgcc cggctgccac agcacgtcct tgccgcgcat gcggttgtag
     1801 cggacgagga tgtcctggat ggtgttgttg agcgcgtgcc cgatgtgcag cgaccccgtc
     1861 acgttcggcg gcgggatgac gatggtgaac gtctcggcgc ccggctttgc ccccgcgccg
     1921 gccttgaatg ccccggtgtc ctgccacgcc tggtagatgc ggccttcgac cgcgccgggt
     1981 tcataagtct tttcgagcat cgtcaattcc agcggcaaag gcccgccgac gggtcggtca
     2041 acgggccggg aggggttaag gtctaaagca aagcccgagg gccggagtca atggcgcggg
     2101 ctgccggacg gctgccggcc tacttcacgc cgcgagaaat ccgggcgatt tccttctcga
     2161 ccacccgctc gaccagcgcc ggcaggtttt cgtcgagcca ttccttcagc atcgggcgca
     2221 tcatgtcgcg catcagcccc tcgatcgtct ggccgccgcc gaccgtcgcg atcgccgaaa
     2281 gccgcgacat cgtcccctgc accgcggcgt tggtcgccgg cgccagcagc tccgctgcca
     2341 ggtcggccga cagcgacgca tccggcatcg gcgccgcctg ggccacggag atcgccggcc
     2401 tcggcgagcg tggcgccgaa ggtggcacgc tgcgcatggc cggcggcggt tccggctcgc
     2461 tctcgaacgc cacgtcctcg ggatcgacca gttccggctc gctggccagc atcgccgcca
     2521 tcggctccga cacatcggcc gcatcggcct cgtcgtcgaa cgccgagctg aaattcgccg
     2581 aggccggttc aggcaccggc acctgttgcg gcgccggcgc cggacggctg gggacgatct
     2641 gggccggcga cagcggcagc ggcgcggctg ccgcaggacg cggcgcagga acgacagggg
     2701 ctgccggagg ccgtggctcc ggctgcggag ccgccgcggc gtcatcatcg gcaatgattt
     2761 gccgaatgga cgacaggatc tcgtccatcg acggctcttt ggtcgccggc ttgttcataa
     2821 aggcctcatc ctgcgcggcg aatggcgcac tcaccgcaaa atgcgcttga ttcgtcaccg
     2881 cttactttag gcgcagctgg cggtttttgc gatgtaaagc cccggcgcgc actgctcttc
     2941 cccaaatctt tgcagtcggg cggcccacgg ccgcccgcta agtccctgcg ctttcggctg
     3001 ttgcagcgag cctagtcgag ggcccgcaat tcggcccaga cgtcctcgac cttggcgatg
     3061 tagtcctcgc cggtcttgac ctcgaccggc aggttgaggt cggcggcggt caggtgaccg
     3121 gtcgccgcaa ccagcgcgaa ggtcgcgatc gccttgctgg cattggcctg gatcaggctc
     3181 tcctgcaccg attcgagatc ggactgcgca ttgagcacgt cgagcgtcgt cgcctgcccc
     3241 acgtcacgct cctgctcggt gccctgcagc gacaggttgc cggccgagac tgccgcattg
     3301 gccgaagtga tctgcgccac cgcattctgc agcgtgctcc aggcggtgat cgtcgcctgc
     3361 ttgatctggt cgctggccga cagcgcgtcg acctcgctct tgatctgggt gatgttcgcc
     3421 ttgcgaatgc tcgcgcccag cttgccgccg gcatagatcg gcaccgacag cgtcagcccg
     3481 acgctggtgt gcggcgtcgg tgtgctcgga cccgaactgg tcgccggccc gaacagcgtg
     3541 ctgccgatcg agccggtcat cgccagcgtc ggcccgaacg cggcgttggc ggcgtcggag
     3601 ttggcctgcg atgcgcggat cgccgccttg gccgaaagga tcgccgggtt gtccgtcgtc
     3661 gcctcggcga tcgcccggtc cagcgtcttg ggcatcagcg tgccgacgtt gaacgtgctc
     3721 gt
//
LOCUS       DATAZA010000438         2059 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2381980, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000438 DATAZA010000000
VERSION     DATAZA010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2381980"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            87..1094
                     /locus_tag="VHZ56_11135"
     CDS             87..1094
                     /locus_tag="VHZ56_11135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018697911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P1 family peptidase"
                     /protein_id="HEX4298563.1"
                     /translation="MRPGPRNLITDVAGLRVGNAEDFHVGTGTTVLLGDVPLRAAVDV
                     MGGSPGSRETELLAPDKLVEHVDALVLSGGSAFGLDAASGVSDALRAAGRGFAVANVT
                     VPIVPAAILFDLLNGGDKTWRENPYRGLGARAYAAAGLDFMLGTAGAGVGATTAGLKG
                     GLGSASLVLESGHTVAALVAANPTGSVTVGDGRHFWAAPFEADGEFGGFGPHIAALPL
                     ADTARTKREYLSAVGNTTIAIVATDADLSKAQLKRLAVAAQDGIARAVSPAHSLVDGD
                     LVFSVSTAARPVEEPIFDLLRIGHAAAICVSRAIARAVYLATPRPGDVFPTWHEKFGP
                     R"
     gene            complement(1091..>2059)
                     /locus_tag="VHZ56_11140"
     CDS             complement(1091..>2059)
                     /locus_tag="VHZ56_11140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017272518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4298564.1"
                     /translation="GPSGCGKSTLLRMIAGLEPISGGDLEIGNQRMNDVDPSKRGIAM
                     VFQTYALYPHMTVRENMGFALRFARVPKPEIARQVDEAARILELAPLMNRRPRELSGG
                     QRQRVAIGRAIVRHPQVFLFDEPLSNLDAELRVHMRIEIARLHKELATTIIYVTHDQV
                     EAMTLADKIVVLRDGAVAQAGTPLQLYDDPDNLFVAGFIGSPKMNFLSGVIDAGATAV
                     RLPQYGGQSIAIAPPAARPADGTAVTVGLRPEHFKRGGAAHLDLTVDLIEHLGGETYA
                     YARFGQGDLLTVATQNDRSLRSGDALAAQFDPAAALLFDSAGQRIR"
BASE COUNT          291 a          684 c          753 g          331 t
ORIGIN      
        1 atgctggaaa tgcggcggac gtgggatccc gatggcgtgc cggtcaatcg cgccctcggt
       61 gaggtccgct cgcatctggc ggcggcatga ggccgggacc gcgcaacctc atcaccgacg
      121 tcgccgggct gcgcgtggga aatgccgagg acttccacgt cggtaccggc acgactgtgc
      181 tgctgggtga tgttccgttg cgcgctgcag tcgacgtgat gggcggttcg cccggttcgc
      241 gcgagaccga gctgctcgct cccgacaagc tggtggagca cgtcgacgcg ctggtgctgt
      301 cgggcggatc ggcgttcggc ctcgatgccg cgtccggtgt cagcgatgcc ctccgagcgg
      361 cgggccgcgg ctttgcggtg gcgaacgtca cggtgccgat cgtgccggcc gcgatcctgt
      421 tcgacctgct caatggcggc gacaagacct ggcgcgagaa cccctatcgc gggctcggcg
      481 cgcgcgccta tgccgccgcc gggctagact tcatgctcgg cacggccggc gccggcgtcg
      541 gcgccacgac tgccggcctc aagggcgggc tggggtcggc gtcgcttgtc ctcgagtccg
      601 gccatacggt ggcagctctg gtcgccgcca atccgaccgg ctcggtcacg gtcggcgacg
      661 gccggcattt ctgggctgcg ccattcgagg ccgatggtga attcggcggc ttcgggccgc
      721 acatcgcagc gctgccgctc gccgacacgg cgcgcaccaa gcgcgaatat ctgagcgcgg
      781 tcggcaacac cacgatcgcc atcgtcgcca ccgatgccga cctcagcaag gcgcagctca
      841 agcggctggc agtggctgcc caggacggaa tcgcgcgggc ggtgagcccg gcgcattcgc
      901 tggtcgacgg tgatctggtg ttttcggtct cgaccgcggc ccggccggtc gaggagccga
      961 tcttcgatct cctgcgcatc ggccacgcgg cggcgatctg cgtcagccgt gccatcgcgc
     1021 gggcggtgta ccttgcgaca ccgcgaccgg gggacgtgtt tcccacctgg cacgaaaagt
     1081 tcgggccgcg ctagcggatg cgctggccgg cactgtcgaa cagcagcgcc gcggccgggt
     1141 cgaactgggc cgcgagggcg tcgccgctcc tgaggctgcg gtcgttctgg gtcgcgaccg
     1201 tcagcaaatc gccctggccg aagcgggcgt aggcgtaggt ctcgccgccg aggtgctcga
     1261 tgaggtcgac ggtgaggtcg agatgggccg cgccaccgcg cttgaagtgc tcgggacgaa
     1321 gaccgacggt cacggcggtc ccgtcggccg gccgggcagc gggcggcgca atggcgatcg
     1381 actggccgcc gtactgggga agccggacgg cagtggcgcc ggcgtcgatg acgccgctca
     1441 ggaaattcat cttgggggag ccgatgaacc cggcgacgaa gagattgtcg ggatcgtcgt
     1501 agagctgcag cggcgtgccc gcctgcgcca ccgccccgtc gcgcagcacg acgatcttgt
     1561 cagccagggt catggcttcc acctggtcgt gcgtcacgta gatgatggtg gtcgccagct
     1621 ccttgtgcag gcgcgcgatc tcgatccgca tgtgcacccg caactcggca tcgagattgc
     1681 tgagcggctc gtcgaacagg aacacctgcg ggtggcggac gatggcccgg ccgatggcga
     1741 cgcgctggcg ctggccgccg ctgagttccc gcggccgccg gttcatcagc ggcgccagtt
     1801 cgaggatgcg ggcggcctcg tcgacctgcc tcgcgatctc gggcttgggg acacgggcaa
     1861 agcgcagcgc aaagcccatg ttctcgcgca ccgtcatgtg cggataaagc gcgtaggtct
     1921 ggaacaccat cgcaatgccg cgcttcgacg gatcgacgtc gttcatgcgc tggttgccga
     1981 tctcgaggtc gccgccgctg atcggctcga gcccggcaat catgcggagc agcgtggact
     2041 tgccgcagcc ggacggccc
//
LOCUS       DATAZA010000439         2229 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_175884, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000439 DATAZA010000000
VERSION     DATAZA010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175884"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2229)
                     /gene="pyc"
                     /locus_tag="VHZ56_11145"
     CDS             complement(<1..>2229)
                     /gene="pyc"
                     /locus_tag="VHZ56_11145"
                     /EC_number="6.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004736 - pyruvate carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pyruvate carboxylase"
                     /protein_id="HEX4298565.1"
                     /translation="CYAEEDKLALHRFKADEAYLIGKGKGPVEAYLQIGEYIRVARLA
                     GADAIHPGYGLLSESPEFAEACEDAGIIFIGPRPQTMRDLGNKVAARNMAIASKVPVV
                     PATEALPDDMGEVRRLAAAIGYPLMLKASWGGGGRGMRRIMDEGHLVAEVSEGKREAK
                     AAFGKDEMYLEKLIERARHVEVQLIGDDHGNLVHLFERDCSVQRRNQKVVERAPAPYL
                     SDAVRSELTEAALRLGRAANYRCAGTVEFLLDADTNKFYFIEVNPRIQVEHTVTEIVT
                     DIDIVKAQIRIMEGAVIGTPASGVPKQDDIKLRDHAIQCRITTEDPEENFIPDYGRIT
                     AYREATGFGVRLDGGTAYAGAIITRFYDPLLEKVTCWAPTPEEAIARMHRALREFRIR
                     GVSTNLAFLENIITHPDFVNNRYTTRFIDTTPELFAFARRKDRATKLLTYIADVTVNG
                     HPEVRDRPRPPAGAIEPVVPLYEPLIVIEGSRQVLDRRGAKGLASWMKEQTAVLFTDT
                     TMRDAHQSLLATRMRSHDITRVAEAYSRGLPNLFSLECWGGATFDVAMRFLNEDPWER
                     LAAVREGAPNILTQMLLRGSNGVGYTNYPDNVVKFFVQQAAKGGVDVFRIFDCLNWVE
                     NMRVSIDAVAEAGKVAEGAICYTGDLLDPNRAKYDLKYYVGLAKELEAAGAHVLGLKD
                     MAGLLKPAAASKLVATLKQEIGLPIHLHTHDTSGASAATIMAAVAAGVDAVDAAMDAF
                     SG"
BASE COUNT          320 a          789 c          726 g          394 t
ORIGIN      
        1 tgccggaaaa cgcgtccatc gccgcatcga ccgcgtcgac tcccgccgcc accgccgcca
       61 tgatggtcgc cgccgaggcg ccggaggtgt cgtgcgtgtg gaggtggatc ggcagcccga
      121 tctcctgctt cagtgtcgcc accagcttgc tggccgctgc cggcttcagc agcccggcca
      181 tgtccttgag gccgagcaca tgcgcgcccg cggcctcgag ctccttggcc agcccgacat
      241 agtatttgag gtcgtacttc gcccggttcg gatcgagcag gtcgccggtg tagcagatcg
      301 cgccctccgc caccttgccg gcttcggcca ccgcatcgat cgagacgcgc atgttctcga
      361 cccagttcag gcagtcgaag atgcggaaca catcgacccc gcccttcgcc gcctgctgga
      421 cgaagaactt gaccacgttg tccggatagt tggtgtagcc caccccgttg ctgccgcgca
      481 gcagcatctg cgtcaggatg ttgggggcgc cctcgcgtac cgccgccagc cgctcccacg
      541 ggtcctcgtt gaggaatcgc atggcgacgt cgaacgtcgc gccgccccag cattcgagcg
      601 aaaacaggtt cggcagtccg cgcgaatagg cctcggcgac acgcgtgatg tcgtggctgc
      661 gcatccgcgt cgcgagcagc gactggtgcg cgtcgcgcat cgtcgtgtcg gtgaacagca
      721 ccgccgtctg ctccttcatc cagctggcga ggcccttcgc accacgccgg tcgagcacct
      781 gccgcgagcc ctcgatcacg atcagcggct cgtagagcgg caccaccggc tcgatcgcgc
      841 cggctggcgg ccgcggccgg tcgcgcactt ccggatggcc gttgacggtc acgtcggcga
      901 tgtaggtgag cagcttggtc gcccggtcct tgcggcgggc gaaggcgaac agctccggcg
      961 tcgtgtcgat gaaccgcgtg gtgtagcggt tgttgacgaa gtcggggtgg gtgatgatgt
     1021 tttcgaggaa cgccaggttg gtgctcaccc cgcggatgcg gaactcgcgc agcgcccggt
     1081 gcatgcgggc gatcgcctcc tcgggcgtcg gcgcccagca ggtgaccttc tccagcagcg
     1141 gatcgtagaa ccgggtgatg atggcgccgg cataggcggt gccgccgtcg agccgcacgc
     1201 caaacccggt cgcctcgcgg taggcggtga tccgcccata atccggaatg aagttctcct
     1261 ccggatcctc ggtggtgatg cggcactgga tggcgtggtc gcgcagcttg atgtcgtcct
     1321 gcttcggcac gcccgaggcg ggcgtaccga tcaccgcgcc ctccatgatc cggatctgcg
     1381 ccttgacgat gtcgatgtcg gtgacgatct cggtgaccgt gtgctccacc tggatgcgcg
     1441 ggttcacctc gatgaaatag aatttgttgg tatcggcatc gagcaggaac tcgaccgtgc
     1501 cggcgcagcg atagttcgcc gcccgcccga gccgcagcgc cgcctcggtc agctcgcttc
     1561 gcaccgcgtc cgaaagatac ggcgccggcg cccgctccac caccttctgg ttgcgccgct
     1621 gcaccgagca gtcgcgctcg aacaggtgca ccaggttgcc gtggtcgtcg ccgatcagct
     1681 gcacctcgac gtggcgggcc cgctcgatca gcttttcgag atacatctcg tccttgccga
     1741 acgccgcctt ggcctcgcgc ttgccctccg aaacctcggc gacgaggtga ccctcgtcca
     1801 tgatccggcg catgccgcgc ccgccgccgc cccagctcgc cttcagcatc agcgggtagc
     1861 cgatggccgc cgcaagacgc cgcacctcgc ccatgtcgtc ggggagcgcc tcggtcgccg
     1921 gcaccaccgg caccttggac gcgatcgcca tgttgcgcgc cgccaccttg ttgccgaggt
     1981 cgcgcatcgt ctgcggccgc ggcccgatga agatgatgcc cgcgtcctcg caggcctcgg
     2041 cgaactccgg gctttcgctc agcaggccat agcccggatg gatcgcgtcg gcgccggcaa
     2101 gccgcgccac ccggatgtat tcgccgatct gcaggtaggc ctcgaccggc cccttgccct
     2161 tgccgatcag gtacgcctcg tcggccttga agcggtgcag cgccagcttg tcctcttcgg
     2221 cgtagcagg
//
LOCUS       DATAZA010000440         2170 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3543379, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000440 DATAZA010000000
VERSION     DATAZA010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3543379"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..835
                     /gene="metK"
                     /locus_tag="VHZ56_11150"
     CDS             <1..835
                     /gene="metK"
                     /locus_tag="VHZ56_11150"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEX4298566.1"
                     /translation="VGAGDQGIMFGYASRETPELLPAPIYYAHKILEVLAEARKAGEG
                     DAKKLGPDAKSQVTVRYENGKPVGVTQIVVSTQHVDASLSSDDVRKIVEPYVRQALPE
                     GWIGKDTVWHVNPTGKFVVGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVD
                     RSAAYAARYLAKNVVAAGLADRATIQLSYAIGVAKPLSIYVDLHGTGKIDEEKLEVVL
                     GNVFDLSPRGIRTRLDLNKPIYAKTSAYGHFGRKPGRDGSFSWEKIDLVPALKAAVKA
                     A"
     gene            832..1539
                     /gene="trmB"
                     /locus_tag="VHZ56_11155"
     CDS             832..1539
                     /gene="trmB"
                     /locus_tag="VHZ56_11155"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEX4298567.1"
                     /translation="MSADHPLTAGGAPRAFFGRRSGKRLHKGQDRLFHDRLPALQIAL
                     PPGELDPETLFQSRPQRLELEIGYGGGEHLARLAAASPDTGFIGCEVFSGGIAKLIEA
                     IDAQGLANIRLFTDDALKLLLQLPAASLDAAYLLYPDPWPKTRHHKRRFVSPTTLAEL
                     ARVLRPGTTFRFATDIEDYANWTLALVLREPRFRFAPAGPGAWHEPWPGWVPTRYEQK
                     ARTEGRNLSFYFEFVRS"
     gene            1536..>2170
                     /locus_tag="VHZ56_11160"
     CDS             1536..>2170
                     /locus_tag="VHZ56_11160"
                     /inference="COORDINATES: protein motif:HMM:NF014601.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX4298568.1"
                     /translation="MTLIIYGVGAIGGVIAGQLAGSGTAVAGIARGEQLEALRRDGLL
                     LRTPGGEVRARFPVVGDPAELDPSPDDVVILCVKSQDTQSALERLAAAGFGSQPIVCA
                     QNGVANERAALRMFPSVYAMLVVMPATFVRPGEVAAFGAPHPGIFDIGRYPHGSDAVA
                     RSLVGSLSQAGFAAFATDDAMASKYGKLIMNLANVLDAAGGDAGTRSPVAAA"
BASE COUNT          333 a          807 c          704 g          326 t
ORIGIN      
        1 cgtcggcgcc ggcgaccagg gcatcatgtt cggctatgcc agccgcgaga cccccgagct
       61 gctgcccgcg ccgatctatt acgcccacaa gatcctcgag gtcctggccg aggcccgcaa
      121 ggccggcgag ggcgacgcca aaaagctcgg ccccgacgcc aagagccagg tcaccgtccg
      181 atacgagaac ggcaagcccg tcggcgtcac ccagatcgtc gtctcgaccc agcacgtcga
      241 cgcttcgctc agctccgacg acgtgcgcaa gatcgtcgag ccgtatgtcc gccaggccct
      301 gccggaaggc tggatcggca aggacaccgt ctggcacgtc aaccccaccg gcaagttcgt
      361 cgtcggcggc cccgatggcg acgccggcct caccggccgc aagatcatcg tcgataccta
      421 cggcggcgcg gccccgcatg gcggcggcgc cttctccggc aaggacccca ccaaggtcga
      481 ccgctcggcc gcctatgccg cccgctacct cgccaagaac gtcgttgcag ccgggctcgc
      541 cgatcgcgcc accatccagc tcagctacgc catcggcgtc gccaagccgc tgtcgatcta
      601 tgtcgacctg cacggcaccg gcaagatcga tgaggaaaag ctcgaagtgg tgctcggcaa
      661 cgtcttcgac ctcagccccc gcggcatccg caccaggctc gacctcaaca agccgatcta
      721 tgcaaaaacc tcggcctatg gccatttcgg ccgcaagccc ggccgcgacg gctcgttcag
      781 ctgggaaaag atcgacctcg tgccggcgct caaggcggcc gtgaaggcgg cgtgagcgcc
      841 gaccacccgc tcaccgccgg cggcgcgccg cgcgccttct tcggccgccg ctccggcaag
      901 cggctgcaca agggacagga ccggctgttc cacgacaggc tgccggcgct gcagatcgcg
      961 ctgccgccgg gcgagctcga tcctgaaacg ttgttccagt cgcggccgca acggctcgag
     1021 ctcgagatcg gctatggcgg cggcgagcac ctggcacgcc tcgccgccgc cagcccggac
     1081 accggcttca tcggttgcga ggtgttctcc ggcggcatcg ccaaactcat cgaggcgatc
     1141 gacgcgcagg ggctcgcgaa catccggctg ttcaccgacg acgcgctgaa gctgctgctg
     1201 cagctgcccg ccgcctcgct cgacgccgcc tacctgctct atcccgaccc gtggccgaag
     1261 acccgccatc acaagcggcg gttcgtctcg ccgacgacgc tggccgagct ggcccgcgtg
     1321 ctgcggcctg gaaccacgtt ccgctttgcc accgatatcg aggactacgc caactggacg
     1381 ctggcgctgg tgctgcgcga gccgcgcttc cgcttcgcgc cggcgggccc gggcgcctgg
     1441 cacgagccgt ggcccggctg ggtgccgacc cgctatgagc aaaaggcgcg caccgagggg
     1501 cggaacctca gcttctattt cgagttcgtg cggtcatgac cttgatcatc tatggggtag
     1561 gtgccatcgg cggcgtgatt gccggacagc tggcgggctc gggcaccgcg gttgcgggca
     1621 ttgcgcgcgg cgagcagctc gaagccctgc ggcgcgacgg actgctcctg cgcacacccg
     1681 ggggcgaggt ccgcgcccgc ttcccggtgg tcggcgaccc ggccgagctt gatccctcgc
     1741 ccgatgacgt cgtgatcctg tgcgtcaaga gccaggacac gcagtcggcg ctcgagcgtc
     1801 ttgccgccgc cggcttcgga tcgcagccga tcgtctgcgc gcagaacggc gtcgccaacg
     1861 agcgcgccgc gttgcggatg ttccccagcg tctacgccat gctcgtggtc atgcccgcca
     1921 ccttcgtgcg tccgggcgaa gtcgcggcgt tcggcgcgcc gcatcccggc atcttcgaca
     1981 ttggccgcta cccgcacggc agcgatgccg ttgcccggtc gctcgtcggt tcgctgtcgc
     2041 aggccggctt tgctgccttt gcgaccgacg acgcgatggc cagcaagtac ggcaagctga
     2101 tcatgaatct cgccaacgtg ctcgacgccg ccggaggcga tgccggcacg cgctcgccgg
     2161 tcgctgcggc
//
LOCUS       DATAZA010000441         1967 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_59754, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000441 DATAZA010000000
VERSION     DATAZA010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1967
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59754"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..551)
                     /locus_tag="VHZ56_11165"
     CDS             complement(<1..551)
                     /locus_tag="VHZ56_11165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003550932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX4298569.1"
                     /translation="MKTLRVPHSDLTVSSIVLGLMRIAKMSNADIGALFDAALAAGVT
                     MIDHADVYGGAPHVCEARFGEAVTLSAADRGRIVIQTKAGIRPGYFDFSAEHILAAVD
                     GSLKALRTEYIDVLLLHRPDTLVEPDDVAKAFDTLHAAGKVRHFGVSNQTPGQIELLK
                     SAVTQPLLFNQVQLSIAHANLFA"
     gene            726..>1967
                     /locus_tag="VHZ56_11170"
     CDS             726..>1967
                     /locus_tag="VHZ56_11170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018896647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX4298570.1"
                     /translation="MIVDTTRSGYAFLAGGGKLGELIAAFDWSRTSLGPIDRWSPTVT
                     TAVALALRSPVPIVMLWGEDGVMIYNDAYSGFAGGRHPRLLGSRVREGWPEVAAFNDN
                     IMKVVLAGGTLSYRDQELVLYRHGAPETLWTDLDYSPIVDEAGKPVAVIAIVLETTEK
                     VMAERWKAVERDRTRDMFEQAPSFMAMLRGPQHVYELTNRSYLQLIGHRDVVGKTVRE
                     ALPELEGQGFYELLDRVFTTGEPFIGTALQADLQRLPGSPLEARYVDFIYQPVRDARG
                     AISGIFVEGSDVTERVEGERSIRESGALFGRLAEAMPNHVWTATPDGMLDWFNTRVYA
                     YSGAQPGELDGQRWASIVHPDDIGAAASIWAERLQSGDDYEVEFRLRRADGAYRWHIA
                     RAVPLRDTDGRIERWIGTNTDI"
BASE COUNT          305 a          705 c          637 g          320 t
ORIGIN      
        1 tgcgcgaaga ggttggcgtg cgcgatcgag agctgcacct ggttgaacag cagcggctgc
       61 gtcaccgccg acttcagcag ctcgatctgc cccggcgtct ggttggacac cccgaagtgc
      121 cgcaccttgc ccgccgcgtg cagcgtgtcg aacgccttgg ccacgtcgtc gggctccacc
      181 agcgtgtccg gccgatgcag cagcagaacg tcgatatact cggtgcgcag cgccttcagc
      241 gagccgtcga ccgccgcgag gatatgctcc gccgaaaaat cgaaataccc gggccggatg
      301 cccgccttgg tctggatgac gatgcggccg cggtccgccg cgctgagcgt caccgcctcg
      361 ccgaagcgcg cctcgcacac atgcggcgcc ccgccataga cgtcggcatg gtcgatcatc
      421 gtcacccccg ccgccagcgc cgcgtcgaac agcgcgccaa tgtcggcgtt gctcatcttg
      481 gcgatgcgca tgagccccag cacgatgctg gatacggtga ggtcggaatg cgggacgcgg
      541 agggttttca tggctaaagt gctctgcaac ggggggaggg cgcgcccggg aaccggggcc
      601 gccgccacct atccagcctt ccgccccgcc gggcaagtgc tatgtcgggg cgagccgggc
      661 ctggccggcg cccgccgctg caaccataag tccgccggcg cgtttcgtgc cgttctgggg
      721 gtttcatgat cgtcgacacc acgcgctccg gttacgcctt cctcgccggc gggggtaagc
      781 tcggcgagct gatcgcggcg ttcgactggt cccgcaccag ccttggaccg atcgaccgct
      841 ggtcgcccac cgtgaccacg gccgtggccc tcgcgcttcg ctccccggtg cccatcgtca
      901 tgctctgggg cgaggatggc gtcatgatct acaacgacgc ctattcgggc ttcgccggcg
      961 ggcgccaccc ccggcttctc ggctcccggg tccgcgaagg ctggcccgaa gtggccgcct
     1021 tcaacgacaa catcatgaag gtggtgctgg ccggcggcac cctgtcctac cgcgaccagg
     1081 agcttgtgct ctatcgccat ggcgcccccg aaacgctgtg gaccgatctc gactactcgc
     1141 cgatcgtcga tgaggccggc aagccggtcg ccgtgatcgc catcgtcctc gagaccaccg
     1201 agaaggtcat ggccgagcgc tggaaggcag tcgagcgcga ccgcacccgc gacatgttcg
     1261 agcaggcccc cagcttcatg gccatgctgc gcggcccgca gcacgtctat gagctcacca
     1321 accggtccta tctccagctg atcggccacc gcgacgtcgt cggcaagacc gtccgcgagg
     1381 ctctgcccga gctcgaaggg cagggattct acgagctcct cgatcgcgtc ttcaccaccg
     1441 gtgaaccgtt catcggcacg gcgttgcagg ccgacctcca gcgattgccc ggcagtccgc
     1501 tggaggcccg ctatgtcgac ttcatctatc agccggttcg cgacgccagg ggcgcgatct
     1561 ccggcatctt cgtcgaaggc tcggacgtca ccgagcgcgt cgaaggcgag cgctccattc
     1621 gcgagagtgg agcgctgttc ggacgcctgg ccgaggccat gcccaatcat gtgtggacgg
     1681 cgacgccgga cggcatgctc gattggttca acacccgcgt ctacgcctac tccggcgcgc
     1741 agccgggcga gctcgacggc cagcgctggg cctcgatcgt ccatcccgac gacatcggcg
     1801 ccgctgcctc catctgggcc gagcgcctgc aaagcggcga cgattacgag gtcgagttcc
     1861 gcctgcggcg cgccgatggc gcctaccgct ggcatatcgc ccgcgccgtg cccttgcgcg
     1921 acaccgatgg gcggatcgag cgctggatcg gcaccaacac cgatatc
//
LOCUS       DATAZA010000442         1553 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4005966, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000442 DATAZA010000000
VERSION     DATAZA010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1553
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4005966"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2..508
                     /locus_tag="VHZ56_11175"
     CDS             2..508
                     /locus_tag="VHZ56_11175"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013895300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX4298571.1"
                     /translation="MATYKDPENTLLIETTKGPVVVEMRPDLAPKHVAHIKKLAREGQ
                     YDGVVFHRVIDGFMAQTGDVKHGNADKGDTSRAGTGGSEYPNLKQEFSSEPHVRGVAS
                     MARSQNPDSANSQFFFVFDDARFLDKQYTVWGKVIDGMDNVDKIKRGEPVRDPDKMVS
                     VKVAADVK"
     gene            536..976
                     /locus_tag="VHZ56_11180"
     CDS             536..976
                     /locus_tag="VHZ56_11180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006465968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX4298572.1"
                     /translation="MLWILLGVVSGACIAVQAPINARLGATLGLPFAAAFVSFAAGAV
                     VLAIVTFGVAAATQTSIQWSAPAPWLFVVGGVLGTVYVTSAVVLTPQIGAAAVMALAV
                     TGQLLAGIVIDRIGFLGLPVREISAGRIGGAVLLVAGALMIRLL"
     gene            981..>1553
                     /locus_tag="VHZ56_11185"
     CDS             981..>1553
                     /locus_tag="VHZ56_11185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014526758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine:tRNA
                     ribosyltransferase-isomerase"
                     /protein_id="HEX4298573.1"
                     /translation="MKVELFDFELPEARIALHPAEPRDSARLLVVKPDGSLADRHVTD
                     LLDLLAPGDVLVVNDTKVLPAELRGTRLRGEARASVAFNLHKRVDAKTWRAFARPAKR
                     LHLLDRLELGDDGSLLATVAGKGDTGEVTLEFDLAGAGLDEAIKAHGAMPLPPYIETK
                     RKPEDRDRIDYQTVYATVDGAVAAPTAGLHF"
BASE COUNT          252 a          505 c          562 g          234 t
ORIGIN      
        1 catggcgacc tacaaggacc ccgaaaacac attgctgatc gaaaccacca agggaccggt
       61 ggtggtcgag atgcggcccg acctcgcgcc caagcatgtg gcgcacatca agaagctggc
      121 gcgcgaagga cagtatgacg gcgtggtgtt ccaccgcgtc atcgacggct tcatggcgca
      181 gaccggcgac gtgaagcacg gcaacgccga caagggcgat acctcgcggg ccgggaccgg
      241 cggatcggaa tacccgaacc tgaagcagga attttccagc gagccgcatg tgcggggcgt
      301 ggcgtcgatg gcgcggtcgc agaatcccga cagcgccaat tcgcagtttt tcttcgtgtt
      361 cgacgacgcg cgcttcctcg acaagcagta caccgtgtgg ggcaaggtca tcgacggcat
      421 ggacaatgtc gacaagatca agcgcggcga gccggtgcgc gatcccgaca agatggtgtc
      481 ggtcaaagtc gccgccgacg tgaagtaggc gagcggaacg gtgaagccgg tggcgatact
      541 ctggatcctc ctcggcgtcg tctcgggcgc ctgcatcgcg gtgcaggcgc cgatcaatgc
      601 ccggctgggc gcgacgctcg ggctgccgtt cgcggcggcc ttcgtgtcgt tcgcggccgg
      661 cgcggtcgtc ctcgccatcg tcaccttcgg cgtcgccgcg gcgacacaaa cgagcatcca
      721 gtggagcgcg ccggcgccgt ggctgttcgt ggtcggcggc gtgctcggaa cggtctatgt
      781 cacctcggcc gtggtgctga cgccgcagat cggcgcggcc gcggtgatgg cgctggcggt
      841 gacgggccag ctgctggcgg gcatcgtcat cgaccgcatc ggctttctcg gcctgccggt
      901 gcgcgagata tcggccggcc gcatcggcgg cgcggtgctg ctggtggccg gcgcgctgat
      961 gatccggctg ctgtgagaag gtgaaggtcg agctcttcga tttcgagctg cccgaggcgc
     1021 gcatcgcgct ccacccggcc gaaccgcgcg acagcgcccg cctgctggtg gtgaaaccgg
     1081 acggatcgct cgccgatcgc cacgtcaccg atctgctgga cctgctcgcg cccggcgatg
     1141 tgctggtggt caacgacacg aaggtgctgc cggcggaact gcgcggcacg cggcttcgcg
     1201 gcgaggcccg agcgagcgtg gcgttcaacc tccacaagcg ggtcgatgcg aagacctggc
     1261 gggcgttcgc gcggccggcc aagcggctgc acctgctcga ccggctggaa ctgggcgacg
     1321 acggctcgct gctggcgact gtggccggca agggcgacac cggcgaggtg acgctggaat
     1381 tcgacctcgc gggcgccggg ctcgacgagg ccatcaaggc gcacggggcg atgccgctgc
     1441 cgccctacat cgagaccaag cgcaagcccg aggaccgcga ccgcatcgac taccagacgg
     1501 tgtatgcgac ggtggacggc gccgtcgccg cgccgacggc gggcctgcat ttc
//
LOCUS       DATAZA010000443         4974 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1105425, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000443 DATAZA010000000
VERSION     DATAZA010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4974
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1105425"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1053)
                     /locus_tag="VHZ56_11190"
     CDS             complement(<1..1053)
                     /locus_tag="VHZ56_11190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010912573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEX4298574.1"
                     /translation="MRHLIFAAGAVFAGGALALLAGPASAQDGSAVLTGKAAFGGWKD
                     DAPGVTRKLTVDDLEAPYVSPSASNNARPVAMPAGAMPKVPAGYKVDLVAKGVGNPRA
                     IRFAPDGDLFVADSEAGRVLVYHFDGDNPVPAKEATFVGGLHQPYGIAFYPADKPQWV
                     YIAESNGLKRFKYSGGAMPAESGDKGEAILSNVPDNHHWTRDVVFSPDGRTMYFSVGS
                     GSNVGDGTMPKTPEGGLKAWISGHPQGDPWGMEEGRAAVWAYTPDGKDGHIFANGLRN
                     CAGMTLQPATGNVWCVVNERDELGDNVPFEYATALKPGAFYGWPWFYNGDHADPRWKD
                     TPRADLADKVTVGDVLF"
     gene            1215..2339
                     /locus_tag="VHZ56_11195"
     CDS             1215..2339
                     /locus_tag="VHZ56_11195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017963258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase"
                     /protein_id="HEX4298575.1"
                     /translation="MSLLFSPLALRDLTLRNRTVVAPMCQYSSQHGFANDWHLVHLGR
                     FAIGGFGLVIVEATGVTAEGRISYGDMGLWSDDHIAPLARIADFLHREGAAAGIQLAH
                     AGRKASTPIGWRQGFDETEAEKPLVAFESWTPIAPSAIIHSETSPGYTAPRAMTLADI
                     DATVAAFAAAARRADAAGYDVTEIHGAHGYLINQFLSPIANKRTDAYGGSRDNRMRFA
                     LEVTDAVRAAWPATKPLFMRISATDGSAGGWQVEDSVVLAHALKARGVDVIHVSSGGF
                     DGYGLKPAPLYQVPLAKAVRDAGIKTIAVGLITEPRDAEAILETGEADMVALARGALE
                     DPNWAIHAHHVLDGADYSLWPLQARERVRSKDKVLGIRQS"
     gene            2481..2912
                     /locus_tag="VHZ56_11200"
     CDS             2481..2912
                     /locus_tag="VHZ56_11200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298576.1"
                     /translation="MTSKAAILALLTLWGVGATVPYPAFADEKTATESSGEDSADGSL
                     TNRVWIKNDAAALPGVIKIFLSDGTLVQDSCWETHRLSAWQRTSAGSLTWNEDGTEIK
                     ADIVTLTADELVLSLKLKGGAVEEHYAPAAVPAVCPDIPKS"
     gene            complement(2917..4839)
                     /locus_tag="VHZ56_11205"
     CDS             complement(2917..4839)
                     /locus_tag="VHZ56_11205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter Kup"
                     /protein_id="HEX4298577.1"
                     /translation="MTQTTASGAAAAGEFAAPVAGQGNKHLPILVLGALGVVYGDIGT
                     SPIYAFRQAFASRGASGHLTGDVLGLLSLVIWALTITVSIKYVFFVTRADNKGEGGVL
                     SLMSLVRSTFTHRTGWIVGLGVVGAALFFGDAIITPAISVLSAVEGVEVVQPTLASWV
                     VPITVVVIAGLFFFQRFGTARVSTIFGPVMVVWFLTLGISGAVHIVQNPTVLWAINPA
                     HGILFLSTHWTTAFVVVGAVFLAVTGAEALYADLGHFGRKPIVIAWFGLVFPALLLNY
                     LGQGAYLIATGESGADNPFFTMQPDWFQLPFVVLTTAATVIASQAVISGMFSLAQQAA
                     ALNFLPRLTVRHTSETQSGQIYVPQISGILYVLVTILVIAFGSSSALSAAYGIAVSGV
                     MLGTAIFLSLVMWRRWKWPIAATALVMTPFLVVDVSFFVSNLFKILEGGWVPVLVATV
                     AVLLMTVWILGRKRLSDKTRRDEVPLEFLVENLAKKKPTIVPGTAVFLTSDISGAPTA
                     LLHSLKHYKVLHEHNVILTIVTAETPRVSDDEKVKIDAYNDLFYRVVVTFGYIETPNI
                     PKALALARKLGWKFDIMSTSFFLSRRSLKPSTKGGLPVWIDRIFIALARNATDATEYF
                     HIPTGRVVEIGTQVLL"
BASE COUNT          901 a         1743 c         1523 g          807 t
ORIGIN      
        1 gaacagcacg tcgcccaccg tcaccttgtc cgcgaggtcg gcccgcggcg tgtccttcca
       61 gcgcggatcg gcatggtcgc cattgtagaa ccacggccag ccgtagaagg cgcccggctt
      121 cagcgccgtc gcgtactcga acggaacgtt gtcgcccagt tcgtcgcgct cgttgacgac
      181 gcaccacacg ttcccggtcg ccggctgcag cgtcatgccg gcgcagttgc ggaggccatt
      241 ggcaaagatg tggccgtcct tgccgtccgg cgtgtaggcc cacaccgccg cccggccctc
      301 ttccattccc cacggatcgc cctgcgggtg gccggaaatc caggccttga gcccgccctc
      361 cggcgtcttc ggcatcgtcc catcgccgac attgctgccc gacccgacgg aaaagtacat
      421 cgtccggcca tcaggcgaga acaccacgtc gcgcgtccag tgatgattgt ctggcacgtt
      481 cgagaggatg gcctccccct tgtcgccact ttcggccggc atcgcgccgc cggaatattt
      541 gaaccgcttc agcccgttgc tctcggcgat atagacccat tgcggcttgt cggccggata
      601 gaacgcaatt ccgtacggct ggtgcaggcc gccgacgaac gtcgcctctt tggccggcac
      661 cggattgtcg ccgtcgaaat gatagaccag cacccggccg gcctcgctgt cggcgacgaa
      721 caggtcgcca tccggcgcaa agcggatggc gcgcggattg ccgacaccct tggcgaccag
      781 gtcgaccttg tagcccgccg ggaccttcgg catcgccccg gccggcatcg ccactggccg
      841 ggcgttgttc gacgcgctcg ggctcacata cggcgcctcg aggtcgtcga ccgtcagctt
      901 ccgcgtcacc cccggcgcgt cgtccttcca gccgccgaac gccgccttgc cggtgagcac
      961 tgcgctgccg tcctgcgctg aagccggtcc ggcgagcagg gccagggcac cacctgcaaa
     1021 aacggcaccg gctgcaaaaa taagatgtct catggctctc tcccatcgcg ccctcacggc
     1081 tggaacgtcg gcgaccgctt ttgcgcctcc cggacacgga agcgtgagca ctgccgaata
     1141 tcgtccatcg tcacttgccg atgaagcgcc gttgcggcag gttggcgacc ctttccccga
     1201 cagcagcagt cccgatgtcc ctcctgtttt ctccgctcgc cctgcgcgac ctgaccctgc
     1261 gcaatcgcac cgtcgtcgcc cccatgtgcc agtattcgtc gcagcatggc tttgccaatg
     1321 actggcacct cgtgcacctc ggacgcttcg ccatcggcgg cttcggcctc gtcatcgtcg
     1381 aggcgaccgg cgtcaccgcc gagggccgca tctcctacgg cgacatgggg ctgtggagcg
     1441 acgaccacat cgctcccctg gcccggatcg ccgatttcct gcaccgcgag ggcgcggcgg
     1501 ccggcatcca gctggcgcac gccggccgga aggcctcgac accgatcggc tggcggcagg
     1561 ggttcgatga gaccgaggcg gaaaagccgc tcgtcgcctt cgagtcgtgg acgccgatcg
     1621 cccccagcgc catcatccac tcggaaacgt cacccggcta caccgcgccg cgtgccatga
     1681 cccttgccga catcgatgcg acggtcgccg ctttcgccgc cgccgcgcgg cgcgccgacg
     1741 cggcgggcta tgacgtgacg gaaattcatg gtgcgcacgg ctacctgatc aaccagtttc
     1801 tctcccccat cgccaacaag cgaaccgatg cctatggcgg cagccgcgac aaccgcatgc
     1861 gcttcgccct cgaagtcacc gacgccgtgc gcgccgcctg gcctgcgacg aagccgctct
     1921 tcatgcgtat ttcagccacc gacggtagtg ccggcggctg gcaggttgag gattccgtcg
     1981 tcctcgccca tgcgctgaag gcccgtggcg tcgacgttat ccacgtttcc tccggtggct
     2041 tcgacggcta cggcctgaag ccggcgccgc tctaccaggt gccgctggcc aaggccgtcc
     2101 gcgacgccgg catcaagacc atcgccgtcg gcctgatcac cgaaccccgc gacgccgaag
     2161 ccatcctcga aaccggcgag gccgacatgg tcgccttggc ccgcggcgcc ctcgaggatc
     2221 ccaactgggc catccacgcc caccacgtcc tcgatggcgc cgactactcg ctctggcccc
     2281 tccaggcccg cgagcgcgtg cgcagcaagg acaaagtcct cggcatccgg cagtcctgag
     2341 cggcgccgta ccttaaagtt tggcaaggct cttcaagtcc aacgcagttg gcacagtctc
     2401 gcccaatttc cttggcgaca cttgcaaccc gggaaacgca ctcccagata ccgttcgtac
     2461 acttacgatt gagggcgctc atgacaagca aagctgccat ccttgcactg ctgaccctgt
     2521 ggggcgtcgg cgccaccgtc ccctatcccg ctttcgccga cgagaagacg gcaacggaat
     2581 cctccggcga ggactcggcc gacggcagcc tgaccaaccg ggtctggatc aagaacgacg
     2641 cggcagcgct tcccggggtc atcaagatct tcctgtcgga tgggacgctg gtgcaggact
     2701 cctgctggga aacccaccgg ctctcggcct ggcagaggac ctcggccggc tcgctgacct
     2761 ggaacgagga cggcaccgag atcaaggcgg acatcgtcac cctgaccgcc gatgaactgg
     2821 tgctctcgct caagctcaag gggggcgccg tcgaggagca ttacgcgccg gcggccgttc
     2881 cggccgtctg cccggacatt cccaagagct gaacggctag agcagcacct gcgtcccgat
     2941 ctccaccacc cggcccgtcg ggatgtggaa atactccgtc gcgtcggtgg cattgcgagc
     3001 cagtgcgatg aaaatcctgt cgatccacac tggtagcccg cccttggtcg aaggtttcag
     3061 cgaccggcgg ctgaggaaaa acgaggtcga catgatgtcg aacttccagc cgagcttgcg
     3121 cgccaacgcc agcgccttgg gaatgttcgg cgtctcgatg tacccgaacg tcaccacgac
     3181 ccggtagaac aggtcgttgt aggcgtcaat cttgaccttc tcgtcgtcgc tgacgcgagg
     3241 cgtttcggcg gtgacgatgg tcaggatgac gttgtgctcg tgcagcacct tgtagtgttt
     3301 gaggctgtgc aggagggccg tcggggcgcc gctgatatct gacgtcagaa acaccgccgt
     3361 tcccggcacg atcgtcggct tcttcttggc gaggttctcg accaggaact ccaggggcac
     3421 ctcatcccgc cgggtcttgt cgctaagccg cttgcgtccg agaatccaga ccgtcatcag
     3481 cagcaccgcc accgtcgcga ccagcacggg cacccagccc ccctccagaa tcttgaagag
     3541 attggagacg aagaagctga cgtcgacgac gaggaacggt gtcatcacca gcgcggtggc
     3601 ggcgatcggc catttccagc gccgccacat caccagcgac aggaagatcg ccgtcccgag
     3661 catgacaccg ctcacggcga tgccgtacgc agctgaaagc gcgctggaac tgccgaaggc
     3721 gatgaccagg atcgtcacca ggacatagag gatgccgctg atctgcggca cgtagatctg
     3781 gccgctctgc gtttcggagg tatggcgcac cgtcagccgc ggcaggaaat tgagcgccgc
     3841 cgcctgttgc gcaagactga acatccccga gatcacggcc tggctcgcga tgaccgtggc
     3901 cgccgtcgtc agcaccacga acggcagctg gaaccagtcg ggctgcatcg tgaaaaacgg
     3961 attgtcggcg ccgctctcgc cggtcgcgat gaggtaggcg ccctgcccca gatagttgag
     4021 cagcagggcc ggaaacacca gcccgaacca ggcgatgacg atcggcttgc ggccgaaatg
     4081 cccgaggtcg gcatacagcg cctcggcgcc cgtgacggcc aggaacaccg caccaaccac
     4141 cacgaaggcg gtggtccagt gcgtcgacag gaacaggatc ccgtgcgcgg gattgatcgc
     4201 ccagagcacc gtgggattct gtacgatgtg cacggccccg ctgatcccca gggtcaggaa
     4261 ccacaccacc atcaccgggc cgaagatcgt gctgacccgc gccgtgccga agcgctggaa
     4321 gaaaaacagt ccggcgataa cgaccacggt aatcggcacc acccagctgg ccagcgtcgg
     4381 ctgcaccacc tcgacgcctt ccaccgccga gagcacggag atcgccggtg taatgatggc
     4441 atcgccaaag aacagcgcgg ctccgacgac gcccagtccg acgatccagc cggtgcggtg
     4501 ggtgaaggtc gagcgcacca gcgacatcag cgacagcacg ccgccctcgc ccttgttgtc
     4561 cgcccgcgtg acgaagaaga cgtatttgat cgaaaccgtg atcgtcagcg cccagatcac
     4621 cagcgacagc aatccgagga cgtcaccggt caggtggccg ctcgcgccgc gggaggcgaa
     4681 ggcctgacgg aacgcgtaga tgggactggt gccgatgtct ccatagacca cgcccaatgc
     4741 gcccagcacc aggatcggaa ggtgcttgtt gccttggccg gcaacgggag ccgcgaattc
     4801 gccggcggcc gcagccccgg acgcagtggt ttgcgtcata tagcctacaa gaccccggaa
     4861 ggaggcgggc ggggtctaca cccggcccaa gtcgcattca atcgctcgaa ctgccagaac
     4921 ctagcagatt cctgttgcgg aaaacgcccc agcagcgggt gcgatccatt ggct
//
LOCUS       DATAZA010000444         2936 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4122456, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000444 DATAZA010000000
VERSION     DATAZA010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2936
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4122456"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..513)
                     /locus_tag="VHZ56_11210"
     CDS             complement(<1..513)
                     /locus_tag="VHZ56_11210"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX4298578.1"
                     /translation="MIHEHFLAVAAKAPTTSGLRQGDSFASYAELAERVARLATGLAG
                     RGIGRGSVVALLIPNSPEIFVVAHALFAIGAIAMPLGITATRAELAALGGKTGLAAVV
                     AAPRFVAAAEALVADVNPAALLWRTDALGELEANPGTLPTIASETTALYLFSSGSTGL
                     PKIVPHSHAEL"
     gene            complement(538..1083)
                     /locus_tag="VHZ56_11215"
     CDS             complement(538..1083)
                     /locus_tag="VHZ56_11215"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HEX4298579.1"
                     /translation="MRNVVLAMFMSLDGYTEAPNGEMVPPPFSADLKTKWIDRNLSRA
                     DLLMYGRVAYEGMVAFWTAPNAPAAEAAQLAAFDKLVFSRTLQKADWGNVSIVADNIA
                     DEVQRRRAQPGKDMVLLAGAGIANSFLELDLIDEMDLMIMPVLFGGGKRLFSGNTGRR
                     KLQLAESFTMTGGLVRAIYRR"
     gene            complement(1098..1562)
                     /locus_tag="VHZ56_11220"
     CDS             complement(1098..1562)
                     /locus_tag="VHZ56_11220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008840646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX4298580.1"
                     /translation="MSDHSVAHGTFVVERTYNHPVEKVWAAWSDSKLKARWFGGGPEA
                     MPAQTFEFKSGGRESRQGIIDPNGPNFSFDVLYQDIVPNSRIVYNYDMHMDGKKISVS
                     LAAVEFWPEGGQTKLRLTEYGLFLDGLDNAAQRKEGTMALIRQLGEFLDGKR"
     gene            complement(1627..1962)
                     /locus_tag="VHZ56_11225"
     CDS             complement(1627..1962)
                     /locus_tag="VHZ56_11225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018409726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX4298581.1"
                     /translation="MNDATTNLDRMFEALADPTRRAMVERLGRGPASVSELAAPLPMS
                     LPAVVQHLQVLEKSGLITTQKIGRTRTCTIDNGALSLVEQWINDRRTGWERRLDRLGS
                     LLDAEDGTP"
     gene            complement(1959..2522)
                     /locus_tag="VHZ56_11230"
     CDS             complement(1959..2522)
                     /locus_tag="VHZ56_11230"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HEX4298582.1"
                     /translation="MRKLIYSISVSLDGYINDARGSLNWVRVDEEYHRFANEQMRETG
                     LSIYGTRMWQTMTYWDTAEDQPGHPEFMYEFARLWKPAPKLVFSHSLADADMRAGAQL
                     RRDGLIEEVTRLKSEPGKPIAVSGATLASALLDAGLVDELQPFIVPVVIGGGVPFLQV
                     RRRLDFELLETRRFASGTVFHRYARRP"
     gene            complement(2600..>2936)
                     /locus_tag="VHZ56_11235"
     CDS             complement(2600..>2936)
                     /locus_tag="VHZ56_11235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HEX4298583.1"
                     /translation="SGITWSGFDNFYFLFSHQDSADSFAIPHDIQILKAVYAVADPDR
                     DVPAPGRDLYNRANAYFTSNDMSHMIGGLDRGAKERLVARVDDLTALYADLSVRYQRD
                     KGRKGIPLS"
BASE COUNT          473 a          911 c         1032 g          520 t
ORIGIN      
        1 cagctcggca tggctgtgcg gcacgatctt gggcagtccg gtcgagccgg acgagaagag
       61 atagagcgcg gtggtctccg acgcgatcgt cggcagcgtc ccggggttcg cctcgagctc
      121 gccaagggca tcggtgcgcc acagcagggc cgcggggttc acgtccgcga ccagcgcctc
      181 ggcggccgcg acgaaccgcg gcgcggcgac cacggcagcg aggccggtct tgccgcccag
      241 cgccgccagc tcggcgcgcg tcgcggtgat gccgagcggc atggcgatgg cgccgatggc
      301 gaacagcgcg tgagccacga cgaagatctc gggcgagttg gggatcagca gcgccacgac
      361 gctgccccgg ccgatgccgc gcccggcgag gcccgtggcg aggcgggcga cgcgttcggc
      421 cagctcggcg tacgaggcaa agctgtcgcc ctgccgcaat ccgctcgtcg tcggtgcctt
      481 cgccgcgacg gcgaggaagt gctcgtggat catgccgggc gttctagcgc ctccggttca
      541 tcggcgatag atcgcccgca ccagcccgcc ggtcatggta aagctctcgg ccagctgcag
      601 cttgcggcgg ccggtattgc cgctgaacag ccgcttgccg ccaccgaaca gcaccggcat
      661 gatcatcagg tccatctcgt cgatcaggtc gagctcgagg aagctgttgg cgatgccggc
      721 gccggccagc agcaccatgt ccttgccggg ctgggcccgg cggcgctgca cctcgtcggc
      781 gatgttgtcg gcgacgatgc tgacattgcc ccagtcggcc ttttgcaggg tccgcgaaaa
      841 caccagcttg tcgaacgccg cgagctgggc ggcttcggcc gccggcgcat tgggcgcggt
      901 ccagaacgcg accatgccct cgtaggccac ccggccatac atcagcaggt cggcccggct
      961 cagattgcgg tcgatccatt tggtcttgag gtcggcggag aagggcggag gcaccatctc
     1021 gccattgggc gcctcggtgt agccatcgag cgacatgaac atggcgagga cgacgttacg
     1081 catgggggac tccgttacta ccgcttgccg tcgaggaatt cgccgagctg gcggatcagg
     1141 gccatcgtcc cttccttgcg ttgggcggcg ttgtcaaggc catcgaggaa gagtccgtat
     1201 tcggtcagcc gcagcttggt ctgcccgccc tccggccaga actcgacggc ggccagcgac
     1261 accgagatct tcttgccgtc catgtgcatg tcgtagttgt agacgatgcg gctgttcgga
     1321 acgatgtcct ggtaaagcac gtcgaagctg aagttcgggc cgttggggtc gatgatgccc
     1381 tgcctcgatt cgcggccgcc ggatttgaac tcgaaggtct gcgccggcat ggcctccggt
     1441 ccgccgccga accacctggc cttgagcttc gagtcggacc aggctgccca gactttctcg
     1501 accgggtggt tgtaggtgcg ttcgacgaca aaagtgccgt gcgcgacgga atgatcgctc
     1561 atgaaaaatc tcctttgatg gatcggcgtt ctatctgaag cgagagtgtg ttacggtagg
     1621 caccagtcac ggcgtgccgt cttcggcatc gagcaggctc ccgagccggt cgagtcgccg
     1681 ttcccagccg gtgcggcggt cattgatcca ttgttcgacg aggctgaggg cgccgttgtc
     1741 gatggtgcag gtgcgggtgc ggccgatctt ttgagtggtg atcagaccgc tcttttcgag
     1801 cacctgcagg tgctggacga cggccggcag cgacatcggc aacggcgccg ccagttcgct
     1861 gaccgaggcg ggaccgcgac ccagccgctc gaccatcgcc cgccgcgtcg gatcggccag
     1921 cgcctcgaac atacggtcga gattagtcgt tgcgtcgttc atgggcgccg cgcgtagcgg
     1981 tggaacactg tgcccgaggc gaagcggcgg gtttcgagca gctcgaaatc cagccggcgc
     2041 ctgacctgca ggaacggcac gccgccgccg atgacgaccg gtacgatgaa cggctgcagc
     2101 tcgtcgacga gaccggcgtc aagcagggcc gaagcgaggg tcgcgccgga gacggcgatc
     2161 ggcttgccgg gctcggattt gagccgcgtg acctcttcga tcagcccgtc gcgccgcagc
     2221 tgggcgccgg cgcgcatgtc ggcatccgcg agagaatggg agaacaccag tttcggcgcc
     2281 ggcttccaga ggcgggcaaa ctcgtacatg aactcgggat ggccgggctg gtcttccgcg
     2341 gtgtcccagt acgtcatcgt ctgccacatc cgcgtgccgt agatcgacag gccggtctcg
     2401 cgcatctgct cgttggcgaa gcggtggtac tcctcgtcga cgcgcaccca gttcagcgag
     2461 ccgcgggcgt cgttgatgta gccgtccagg gaaaccgaga tggaatagat gagcttgcgc
     2521 attggcacgt tccttactta agtaatggct taagtgacgt tgcgagccct gtcaatgcta
     2581 aatcgtctgc ttaactgtct tagctgagcg ggatgccctt gcggcccttg tcgcgctggt
     2641 agcggaccga gaggtcggcg tagagggcgg tgaggtcgtc cacgcgggcg acgaggcgct
     2701 ccttggcgcc gcggtcgagg ccgccgatca tgtgcgacat gtcgttgctg gtgaaatagg
     2761 cgttggcgcg gttgtagagg tcgcggcccg gcgcagggac gtcgcggtcc gggtcggcga
     2821 ccgcgtacac cgccttcagg atctggatgt cgtgcgggat ggcaaagctg tcggccgagt
     2881 cctggtggct gaacaggaag tagaaattgt cgaagccgga ccaggtgatg ccgctg
//
LOCUS       DATAZA010000445         2975 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3428815, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000445 DATAZA010000000
VERSION     DATAZA010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2975
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3428815"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            173..943
                     /locus_tag="VHZ56_11240"
     CDS             173..943
                     /locus_tag="VHZ56_11240"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c family protein"
                     /protein_id="HEX4298584.1"
                     /translation="MDSFELNKILGAILGTLLFVMGIGFLAEAIYEPGHSGPSYDLPT
                     PPPADGSTTTAPAPVVDIGTLLAKADPKAGAESARVCQACHDFTEGGPNKIGPNLYDV
                     VERPIASHPGFAYSDDLSKLKDQTWTYQLLNKWLTSPKSVAPGTKMTFAGISDDGDRA
                     NVIAYLSTLSHSPKPFPAPAAASSSAAPAGSSSASEAPPSSSLSPNSPSNAVETPSAS
                     VEGPTVAASSAAPAPSSAASSSADAASASAAASSSAAQ"
     gene            1013..1951
                     /locus_tag="VHZ56_11245"
     CDS             1013..1951
                     /locus_tag="VHZ56_11245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase A"
                     /protein_id="HEX4298585.1"
                     /translation="MTTLLLHLSDVDEARWADRYRAALPEMRVVRRGDAVDPASVDYI
                     FVWKPRPDAFSGLTRLKAVLSLGAGVDALLKHPALPAAPMVRFIDEDLTQRMSDYVIA
                     QVTMHQRLLTRFRRDQAARRWQQLYPPAAGETRVGIMGLGVLGADAARKLRSLGFAVN
                     GWSRSPHQIEGVTSFAADDLDGFLAATDILVCLLPLTPQTTGILNYELFRKLGRQLDG
                     GPVIVNAARGGHQNEADVVRALGDGTLGAASLDVFESEPLRADSPLWGLDNCYLTPHI
                     AAISNIEAGVRYFSRIIRAHEAGEPLPNVVDRGRGY"
     gene            complement(1961..2887)
                     /locus_tag="VHZ56_11250"
     CDS             complement(1961..2887)
                     /locus_tag="VHZ56_11250"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing GNAT family
                     N-acetyltransferase"
                     /protein_id="HEX4298586.1"
                     /translation="MDDALLIPEVRAFNRFYTRLVGALDAGHLQTPHTLTEARVIYEI
                     ATRGKATPGELATELKLDSGYVTRLVAKLAEAGLIETERDPADRRSTNLRLTAQGRAA
                     FATLDRATDALFAELLAPLDAGGRRQLQAAMSAIRRILGDPAAPGPVILRPPRIGDFG
                     WMIHRQAILYNAQFGWNGDFEALIAGIYSLYHAAAAHPAKDMWIAEQGGAIVGSIFVM
                     PSDALPGSAQLRMLYVEPAARGQGIGRTLVAQAVDFARARGYERMRLWTHTIQHSARR
                     VYAAAGFRLVETMPEENFGQSLIGEIWEMTFQ"
BASE COUNT          485 a         1016 c          988 g          486 t
ORIGIN      
        1 tctccaaagg acaattgtcg caggcggcgc aaggcggttg cgggttattt tcgggcagac
       61 tatcttgccg cgcgtcggga cgggggcccc gctctgtaat ccagcagaag cggcgtttac
      121 agctttgttc ccagtcgtct ataccccgga cggaaaaggc tgagagactg cgatggatag
      181 cttcgaactt aacaaaatcc tcggcgccat tctgggcacc ctgctgttcg tcatgggcat
      241 cgggttcctc gccgaagcga tctacgagcc gggccattcg gggccgagct acgatctgcc
      301 gacgccgccg cccgcggacg gcagcaccac caccgctccg gcgccggtcg tcgatatcgg
      361 cacgctgctg gccaaggcgg accccaaggc cggggccgag tcggcccgcg tctgccaggc
      421 ctgccacgat ttcaccgagg gtggtcccaa caagatcggc cccaacctct acgacgtggt
      481 ggagcgtccg atcgccagcc accccggctt cgcctacagc gacgatttga gcaagctcaa
      541 ggaccagacc tggacctacc agctcctgaa caagtggctg acctcgccca aatcggtggc
      601 gcccggcacc aagatgacgt ttgccggcat cagcgacgat ggcgaccggg ccaacgtgat
      661 cgcctacctg tcgacgctat cgcattcgcc caagccattc ccggcccccg cggcggcgag
      721 ttcgtcggcg gctccggcgg gcagctccag cgcctcggaa gcgccgccgt cctcgtcgct
      781 gtcgccgaat tccccgagca acgccgtgga gacgccgagc gcttcggttg aaggcccgac
      841 ggtagcggcg agcagtgccg cgccggcacc ctccagcgcg gcctcgtcat cggcggacgc
      901 agcttcggct tcggcggccg cctcgtcgtc cgctgcccag tagcgacagg cacatggtcg
      961 agaccatgcg gagccgcacc ccaggtgcgg ctccatgcat ttggagggac ggatgaccac
     1021 cctgctgctc cacctctcgg acgtcgatga agccagatgg gcggatcgct atcgcgcggc
     1081 actgcccgaa atgcgcgtgg tgcgccgcgg cgatgcggtc gatccggcga gcgtcgacta
     1141 catcttcgta tggaagccgc ggcccgacgc cttcagtggc ctgacgcggc tcaaggcggt
     1201 gctgtcgctc ggcgccgggg tggatgcgct gctcaagcac cctgccctgc ccgctgcgcc
     1261 gatggtccgc ttcatcgacg aggatctgac gcaacggatg agcgactacg tgatcgcgca
     1321 ggtgaccatg caccagcggc tgctcacgcg gtttcggcgc gaccaggcgg cacggcgctg
     1381 gcagcaattg tatccgcccg cggcgggcga aacgcgtgtc ggcatcatgg gcctcggggt
     1441 gttgggagcg gatgcggcgc ggaagcttcg cagcctcggc ttcgccgtca atggctggag
     1501 ccgttcgccg caccagatcg aaggggtgac gagctttgcg gcggatgacc tcgacggctt
     1561 cctcgcggcg accgacatcc tcgtctgcct gctgccgctg acgccgcaga ccaccgggat
     1621 tctcaactac gagcttttcc gcaagctcgg gcggcagctc gacggcggtc cggtgatcgt
     1681 caatgcggcg cgcggcgggc accagaacga ggccgacgtc gtgcgggcgc ttggcgacgg
     1741 cacgctgggg gcggcgagcc tcgacgtgtt cgagagcgag ccgctgcggg ccgacagccc
     1801 gctgtggggg ctcgacaatt gctatctcac gccgcacatc gcagcgatct ccaacatcga
     1861 ggccggggtt cgctatttct cacgcatcat ccgtgcgcac gaggcgggcg agccgctgcc
     1921 caacgtggtc gaccgcgggc gcggttacta acacggcgcg ctactggaac gtcatttccc
     1981 agatttcgcc gatgagcgac tggccgaaat tttcttcggg catcgtctcg accaagcgaa
     2041 accccgccgc ggcatagaca cgacgcgccg agtgctggat cgtgtgggtc catagccgca
     2101 ttcgctcgta gccgcgggcg cgcgcaaaat ccaccgcctg cgccacgagc gtcctgccga
     2161 tgccctgccc gcgggccgcc ggctcgacgt aaagcatgcg cagctgcgcc gagcccggca
     2221 gcgcgtccga cggcatgacg aagatcgagc cgacaatggc gccgccctgc tcggcgatcc
     2281 acatgtcctt ggcgggatgc gccgcggccg cgtgatagag gctgtagatg ccggcgatga
     2341 gcgcctcgaa atcgccgttc cagccgaact gggcgttgta caggatagcc tgccgatgga
     2401 tcatccagcc gaaatcgccg atgcgcggcg gccgcaggat caccggaccc ggcgccgccg
     2461 ggtcgccgag gatccggcgt atcgcgctca tcgcggcctg caactggcgc cggccgcccg
     2521 catcgagcgg cgcgagcagc tcggcgaaca gcgcgtcggt cgcccggtcc agcgtggcaa
     2581 aggccgccct gccttgcgcc gtcagccgca aattcgtcga gcgcctgtcg gcggggtccc
     2641 gttccgtctc gatcaggccc gcttcggcta acttggccac aagccgggtg acgtatcccg
     2701 aatcgagctt gagttcggtc gccagctcgc ccggcgttgc cttgccgcgt gtcgcgatct
     2761 cgtagatcac ccgcgcttcg gtgagggtgt gcggcgtttg caggtggccg gcgtcgagcg
     2821 ccccgacgag gcgggtgtag aagcgattga aggcccggac ctccgggatc agcagggcat
     2881 catccatgat ggacgataca aagcaggcaa ttgcctgctt ttgtcaacta tatcgctgct
     2941 tcaggacgcc atagaccgct cgaatgccct ggtcg
//
LOCUS       DATAZA010000446         3173 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1338426, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000446 DATAZA010000000
VERSION     DATAZA010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3173
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1338426"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            457..1047
                     /locus_tag="VHZ56_11255"
     CDS             457..1047
                     /locus_tag="VHZ56_11255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020085826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HEX4298587.1"
                     /translation="MLILASQSAARQSLLAGAGLKFESSPALIDERALEAAGLGKPSE
                     AVARALAEAKALSVSALRPADWVIGADQMLDLAGERLHKPPDLAAARAQLWALRGRTH
                     ALHSGIALARHGAIVWSTVESARLTMRAFSAGDLDAVLAAEGTALLGAVGSYRLEGPS
                     IGLFERLEGDYFTILGLPLLPLLAALRQFAPTERFT"
     gene            1044..1865
                     /locus_tag="VHZ56_11260"
     CDS             1044..1865
                     /locus_tag="VHZ56_11260"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0019632 - shikimate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEX4298588.1"
                     /translation="MKRAFVIGHPIAHSRSPLIHNFWLRAYGIEGSYEPIDVAPADLG
                     AFFERLRTGEFAGGNVTIPHKQVAFDLVDAREPLAEAIGAVNTLVVDNGEVSGSNTDY
                     LGFLGNLDQAAPGWDKGLGEAIVLGAGGACRAVLVALKSRDIGHIHLLNRTVGKAEAV
                     ALDLEGRIEVGGLGDFPARAANARLVVNTSAVGMKGTAFDDLDLGRLPGDALVTDIVY
                     TPLETPLLADARSRGLRTVDGLGMLLHQAVPGFEAWFGRRPEVTPELRALVEASL"
     gene            1865..2461
                     /gene="coaE"
                     /locus_tag="VHZ56_11265"
     CDS             1865..2461
                     /gene="coaE"
                     /locus_tag="VHZ56_11265"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019862182.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEX4298589.1"
                     /translation="MQKLGLTGSIATGKSTVLQMFADLGVPVFSSDAAVHALYEAEAV
                     PAVEALFPGVSHNGRIDRAELGGRLLGHPDRLAQLEAAVHPLVRARVRAFLAEAEAAA
                     APLAVVDVPLLFETGVDYGLDRVAVTTADPATIRRRALARPGMSVEKLDAILARQLPQ
                     AEKRQRADYVLSSDAPLETLRAAVAAIVAELSAATEAR"
     gene            2458..3162
                     /gene="dnaQ"
                     /locus_tag="VHZ56_11270"
     CDS             2458..3162
                     /gene="dnaQ"
                     /locus_tag="VHZ56_11270"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HEX4298590.1"
                     /translation="MTREIVLDTETTGLNPLGGDRVVEIGGVELVNHIPTGRHFHKYV
                     NPERQMTEDAFRVHGLSDEFLRDKPRFAEIIDEMLGFFEGAILIAHNAPFDMQFLNFE
                     LEKARRPALGNTVIDTVPLAREKHPGARVSLDALCKHYGIDNSRRTLHGALLDSEILA
                     DVYLELIGGRQVALALVEETRGARAGGPLVPRAAPQRPVPLPSRLDAETLAAHLSLVR
                     TMGEAALWGYYQDEAA"
BASE COUNT          455 a         1162 c         1063 g          493 t
ORIGIN      
        1 ggaccgtttc caccagcggc tttggcgccg ggctcacagt cgggtccaag agaagagtct
       61 ggattcttct atcatcagta tcatagcggt gttttgcagg aattcatcgc cgccgcctag
      121 ccgcccgcat cgtcgcagac ggtaccgtcc gccgttcccg caagctgggg acactcgcct
      181 gtggagcgtg gagacccggc cggactcgcc cgcgttaacg ctttgttaac ctcccgccgc
      241 gggctggctg cctgtgggaa tcccgcggac gaagccatgc ggctggaatc atgttatccc
      301 cgattccggc gttaaccttt cgttaaccgt cccgcttcgc cggctgtgga cgcgggtccg
      361 ggtcagcgcg ggaaactcct ctcccggccc tcggcggccg ctcgtccacc gcccccacgc
      421 tggacccagc aaggactctg tgaataaacc ccgcccatgc tgatccttgc ctcgcagagc
      481 gccgcgcgac agagcctgct ggcgggggcc gggctcaaat tcgagtcgag tccagccctg
      541 atcgacgagc gggcgctgga ggccgccggg ctggggaaac cgagcgaggc ggtcgcccgc
      601 gccctcgccg aagccaaggc gctgtcggta tccgctttgc gccccgccga ctgggtgatc
      661 ggcgccgacc agatgctgga cctcgccggc gagcgcctgc acaagccccc cgacctcgcg
      721 gcggcccggg cccagctctg ggcgctgcgc ggccggacgc atgcgctcca cagcggcatc
      781 gcgctggcgc ggcacggcgc aatcgtctgg tccacggtcg agtccgctcg cctgacgatg
      841 cgcgcgttca gcgccggtga cctcgacgcg gtgctggcgg ccgaggggac ggcgctgctc
      901 ggcgccgtcg gcagctaccg gctcgagggg ccgtcgattg gactgttcga gcgcctcgaa
      961 ggcgactatt tcaccatcct cggcctgccg ctcctgccgc tgctcgccgc cctccgccag
     1021 tttgccccaa cggaacgatt cacgtgaaac gcgccttcgt catcggccac cccatcgccc
     1081 attcacgctc gccgctgatc cataatttct ggctcagggc ctacggcatc gagggcagct
     1141 acgagcccat cgacgtcgcg ccggccgacc tcggggcgtt cttcgagcgg ctgcggacgg
     1201 gggaattcgc cggcggcaac gtcaccatcc cgcacaagca ggtggcgttc gacctcgtcg
     1261 acgcgcgcga gccgctggcc gaagcgatcg gcgcggtcaa cacgctggtg gtcgacaatg
     1321 gcgaggtcag cggctccaat accgactatc tcggttttct cggcaatctc gaccaggcgg
     1381 cgcccggctg ggacaagggc ctcggcgagg cgatcgtgct gggcgccggc ggcgcctgcc
     1441 gggccgtgct ggtggcgctc aaatcgcgcg acatcggcca catccatctg ctcaatcgca
     1501 ccgtcggcaa ggccgaggcg gtcgccctcg atctcgaggg tcgcatcgaa gtgggcggcc
     1561 tcggcgattt tccggcccgc gccgccaatg cgcggctggt cgtcaacacc agcgcggtcg
     1621 gcatgaaggg caccgccttc gacgatctcg acctcggccg cctgcccggc gacgcgctgg
     1681 tcaccgacat cgtctatacc ccgctcgaaa ccccgctgct cgccgacgcc cgctcgcgcg
     1741 ggctgcgcac cgtcgacggg ctcggcatgc tgctgcacca ggcggtgccc ggcttcgagg
     1801 cctggttcgg ccgccgcccg gaggtgacgc cggagctgcg cgccttggtc gaggccagcc
     1861 tctgatgcaa aagctcgggc tcaccggctc gatcgccacc ggcaagtcga cggtgctgca
     1921 gatgttcgcc gatctcggcg tgccggtgtt ttcctccgac gcggcggtgc atgcgctcta
     1981 cgaggccgag gcagtgccgg cggtcgaggc gcttttcccc ggagttagcc acaatgggcg
     2041 catcgatcgc gccgagctcg gcggccggct gctgggccat cccgatcggc tggcgcagct
     2101 cgaggcggcg gttcatccgc tggtccgcgc ccgggtgcgg gccttcctcg ccgaagccga
     2161 ggccgccgcg gcgccgcttg ccgtggtcga cgtgccgctg ctgttcgaga ccggcgtcga
     2221 ctacggcctc gaccgcgtcg cggtgaccac cgccgatccg gcgacgatcc gccggcgggc
     2281 gctggcccgg cccggcatgt ccgtggaaaa gctcgacgcc atccttgccc gccagctgcc
     2341 gcaggctgaa aagcggcagc gcgccgacta tgtgctgtcg tcggatgcgc cgctcgagac
     2401 gctgcgcgcc gcagtcgccg ccatcgtcgc cgagctcagt gccgcaacgg aggcccgatg
     2461 acccgcgaga tcgtgctcga caccgaaacc accggcctca acccgctcgg cggcgaccgg
     2521 gtggtcgaga tcggcggcgt cgagctggtc aaccacatcc cgaccggccg gcacttccac
     2581 aaatacgtca atcccgagcg gcagatgacc gaggacgcgt ttcgcgtcca cgggctcagc
     2641 gacgagttcc tgcgcgacaa gccgcgcttt gccgagatca tcgacgagat gctgggcttc
     2701 ttcgaggggg cgatcctgat cgcccacaac gcccccttcg acatgcaatt cctcaatttc
     2761 gagctcgaga aggcgcggcg gccggccctc ggcaacaccg tcatcgacac cgtgccgctg
     2821 gcccgcgaaa agcatccggg ggcgcgcgtc agcctcgacg cgctctgcaa gcactacggc
     2881 atcgacaatt cgcggcgcac cctgcacggc gccctgctcg acagcgagat cctcgccgac
     2941 gtctatctcg agctgatcgg cggccggcag gtggcgctgg cgctggtcga ggaaacccgc
     3001 ggcgcccgcg ccggcggccc gctcgtcccc cgcgccgcgc cgcagcggcc ggtacccttg
     3061 ccgtcgcggc tcgacgccga aacgctggcg gcgcatctca gcctggtgcg aaccatgggc
     3121 gaggcggcgc tgtgggggta ttaccaggac gaggcggcgt aatccggcgg ccg
//
LOCUS       DATAZA010000447        11670 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_411045, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000447 DATAZA010000000
VERSION     DATAZA010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 11670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11670
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_411045"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(275..421)
                     /locus_tag="VHZ56_11275"
     CDS             complement(275..421)
                     /locus_tag="VHZ56_11275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298591.1"
                     /translation="MTKYGIAPGKPVADRTPRLSLWRFRRRFLSIASALVAATCARLG
                     IDFG"
     gene            complement(530..991)
                     /locus_tag="VHZ56_11280"
     CDS             complement(530..991)
                     /locus_tag="VHZ56_11280"
                     /inference="COORDINATES: protein motif:HMM:NF013440.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GreA/GreB family elongation factor"
                     /protein_id="HEX4298592.1"
                     /translation="MSRAFTKEIDEPLPEVLPELPVSAALNLVTARGARLIRAKVVEL
                     LRALETAPISDQELRRELRYWSAREASMQVLATPEAPTSVRFGVTVEIVRAGKPLRIT
                     IVGEDEADPAQGLIAWTSPLARAIDGAEAGELLEFAAPGGTEMIEVRSIQA"
     gene            complement(1067..2071)
                     /locus_tag="VHZ56_11285"
     CDS             complement(1067..2071)
                     /locus_tag="VHZ56_11285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018327153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEX4298593.1"
                     /translation="MRAISCVEPGRLELIDIAPPSLRPGWVRVGIAHVGICGTDYHIF
                     EGTHPFLEYPRVIGHELSGRILDGNGSQFAAGEAVVINPYLNCGHCPACVSGTPNCCE
                     TLKVLGVHTDGGMTEEIVVPAGNVYAAGELSLRDAAMVEFLAIGAHAVRRSAIQLGAR
                     VLVVGAGPIGLGTAIFARIAGGEVSVVDAAADKVAATAGLGFAAFAAGGLAADAFLSR
                     RGSGFDVVLDGTGSLRSMNASLLQVRNGGSYTLVGVTTGDLVWPDAEVHRRELNIRAS
                     RNATDADFRHVMASMLAGKVPTDALATHRTDLGQVTTDLPAWARERSGLIKAIVAVAP
                     "
     gene            2204..3193
                     /locus_tag="VHZ56_11290"
     CDS             2204..3193
                     /locus_tag="VHZ56_11290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014766494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4298594.1"
                     /translation="MSSKLFGARGLLAISALALTAGLIAAAPARADTTIPVIVKDTTS
                     PYWQIVLAGACQAGKDLKINVPQLGAQSESDINGQISILENAVAGKPAAIVISPTEFK
                     ALGAPIDEAAKSVPIIGIDSAADSQAFKSFLTTNNETGGKIAADGLAAAIQKKTGAMK
                     GDVALINSLPGVGSLTARDKGFTEELAAKYPDLKLVATKVADGQATTGLNITTDLLTA
                     NPNLVGIFADNLIMGEGAGQAIAENKVADKVALISFDSDDKTIGFLKDGTTAGLLVQD
                     PYRMGYDGVKTALAVSQGQTVDANVDTGANLVTLDNMSDPKISALINPKLDCK"
     gene            3275..4813
                     /locus_tag="VHZ56_11295"
     CDS             3275..4813
                     /locus_tag="VHZ56_11295"
                     /EC_number="7.5.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008125984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HEX4298595.1"
                     /translation="MTTSDVAPGGTAAAQGSGRHDGPILELRNLEKHYGPVLALKPAT
                     LAFKFDEIHAIVGENGAGKSTLIKLLTGVIRRTGGEIYWNGKAVGLDTPQEAIDHGIN
                     AVHQEVVLCRHLSVAANIFLGDEKVKWGLMRKREMNRAAQALLDDMGFHLPAADTLGN
                     LTIGQQQLVATARAALRGTKFLIFDEPTAYLTRQEAAQLFALIRRLRDQGVTIVYISH
                     RLEEVFELADRVSVLRDGTLVGTRDIKDTNENELVALMINRSIEQIYHKEQVPIGEVL
                     LETRNLSGKGFEDISLSVRRGEVVGLYGLIGAGRSEFAMSVFGRNPKSGGQILWKGQP
                     VDIRHERQAIALGIAMAPESRRDQGLNLNLPIGFNINLPIYDRLTHGLTLSGREEAQH
                     ADKQIRDLSIKTPSRRSLASSMSGGNQQKIVIGKWLNHGADLFIFDEPTVGVDVGTKA
                     EIYRLLAQLLKNGAGIILISSYLPEVYELADTLHVFRNGRLTGSNGFHQASHEKVLAE
                     AIGV"
     gene            4826..5803
                     /locus_tag="VHZ56_11300"
     CDS             4826..5803
                     /locus_tag="VHZ56_11300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007801926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4298596.1"
                     /translation="MTTTTEAASKQAVRARRNYSFLFALTLLGVLVLLWAILTAATPN
                     FLTERNIPNLLRQGSMIAILALGETFTIITAGIDLSVGAIAGFSTVVIAMLIQAGIPV
                     WLSIVITLLVGLVIGIFHAFGITKMGLPPFIITLATLTSLRGIGLLMTNGATISITDK
                     GFTDFATLDWLGIPSLFWMVVLMAIPSYVFLNHTRWGRYIFAVGSNPESARLSGVRIQ
                     LIIYLAYSLSAVFAAFVGILLATRIGIGNATQANGWELQAIASSVIGGTSLFGAVGSV
                     HGPLIGAFILATINNGANLLNVNSFWQQIITGGLIILIVFFDQLRRRSR"
     gene            5828..6772
                     /locus_tag="VHZ56_11305"
     CDS             5828..6772
                     /locus_tag="VHZ56_11305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018496433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX4298597.1"
                     /translation="MKTDAVYKQAFNTALSIISRIEPGQRVPSENALSTQMQVSRTTV
                     RKALQELADRGLISSGRDKVVLSRPTDADHFPGAETIATARQVESRFMEWMLRSDLEP
                     GSSINVLELARLFGVSTTGIREFLNGFARFGLIEKRPNASWIFKGLTHDFALELFDVR
                     ELFELKSARAFIALPPEHPAWTELQLLRREHRKLAAELDARFHDFSELDARLHQLIND
                     AAENRFIRDFYDVMAFIFHYHYQWNKTLEKQRNGVAIKEHMAYIDALRSRNWARVKPA
                     AQAHLGTARTTLLNSLQPAAAGVPPRRAALAEPRPHRR"
     gene            6907..7314
                     /locus_tag="VHZ56_11310"
     CDS             6907..7314
                     /locus_tag="VHZ56_11310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298598.1"
                     /translation="MPLLHTVKTGCYALIVALAVGGLALPTLAAPPGPLGPPGSQHNQ
                     MHPNPPPMQPSFNFNFGFDVPGFRFGIGNKACLTDGQIVRELRAKGYSNVQIVSHHNR
                     HNGNNNWVKVSARRGGHTYTFYIDSCRGNVGFW"
     gene            complement(7383..8276)
                     /locus_tag="VHZ56_11315"
     CDS             complement(7383..8276)
                     /locus_tag="VHZ56_11315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase family protein"
                     /protein_id="HEX4298599.1"
                     /translation="MSSVLVVGDVITDIIVMPEGPIVRGSDRRAVIRSRPGGSAANQA
                     VWLGSLGARVKFVSRVAAADLEANLSYFSARGVTAMLVPDSTAPSGVLISIVDTDGER
                     SFLTDRGANLNLSAADLPFSLLDDVDLLLVSGYSFFTSGPRAAVIALLKEARARGVAT
                     AVDPASVGFLREVGPEAFLKWSAGAGTIFANLDEALELTGSVDLGLQMQTLGRFFGRV
                     VIKRGAAGAAVGDRNGIVLAMPARPSDVVDTTGAGDAFAAAFIACELGGGLLERCLRA
                     GIDAGAEAVTRIGGQPAGPSA"
     gene            complement(8279..9199)
                     /locus_tag="VHZ56_11320"
     CDS             complement(8279..9199)
                     /locus_tag="VHZ56_11320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HEX4298600.1"
                     /translation="MASRDPLAISPEVADALSAGRPVVALESTIITHGMPYPQNLEMA
                     GKVEAIVRAGGAVPATIAIMNGRIRVGLDGTDLERLAQTGAAAAKASRRDLAALLSSG
                     AIAGTTVATTMMAADMAGIRLFATGGIGGVHRGAEATFDISADLEELGRTPVAVVCAG
                     AKAILDIPKTLEVLETNGVPVIGYQTDEFPAFWTRSSGLPVDQRLDDPEAVAGLLETQ
                     FGLGLGGVLVANPILAADALDAEMIASTIAAAVADADRAGVTRKALTPYLLKRIFEMT
                     GGKSLVSNIALVENNARVAAAIAVALAARG"
     gene            9578..10669
                     /locus_tag="VHZ56_11325"
     CDS             9578..10669
                     /locus_tag="VHZ56_11325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX4298601.1"
                     /translation="MNKSLALALGALLLTGGGAMAQEEQVLNLYNWSDYRADDTLTNF
                     TKQTGIKVVEANYDSNEALEAKLVAGHTGYDVVVPTANFLQHQIPLGLYLKLDKSKIP
                     NLANVDPAIMKATAAFDPGNVYAVNYMRFSLGIGYNVDMINQRDANAPTDSFALFFDP
                     DNAKKYADCGIELLDSPQEILGMALIYLGIDPNSEKPDDLAKAEKVMDGIKPYIRKFD
                     SSGYIDDLANGDACLVMGYSGDIAIAQSRAADAKNNVNIQYRIPKEGSIAEYDMMAIP
                     ADAPHPENALKFINYILQPEVEAGITDAVFYANPVPAATKLVDPTISGDPNIYPPADV
                     QAKMQGLLTHSQDFTALMTRTWTRIKTGD"
     gene            10721..>11670
                     /locus_tag="VHZ56_11330"
     CDS             10721..>11670
                     /locus_tag="VHZ56_11330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4298602.1"
                     /translation="MLDQPQPAPDARPWRNPNARPFVKIRHVTKKFGDVAAVNDVSLD
                     IFKGELFCLLGGSGSGKSTLLRMLAGFEELTAGSIEIDGQDMAGVPPYRRPVNMMFQS
                     YALFPHMNVWNNIAYGLKRDHMPGPDIDARVDELLKLVKLDGYEGRRPNQLSGGQRQR
                     VALARALAKKPKLLLLDEPLGALDKKLREETQYELVKIQESTGVTFIVVTHDQEEAMS
                     LSTRIGVMNQGEIAMVGEPTDIYEFPNSRYVAGFIGSVNMFEGVVTEDEDDHVRIRSA
                     EAGCDIYVSHGVDCAPDQILWWAVRPEKIRLTRDRPEAEF"
BASE COUNT         2132 a         4154 c         3497 g         1887 t
ORIGIN      
        1 accgccatcc cgccacgaag gaaagaacgc aaacgattga acacgcaaca cccccaaccc
       61 ccgaacgccc gcccgcgtta actacttgtt aattatcacg cttccggcgg agggactagg
      121 tgggatcgct caatgggcta agctcgcaac caatcgcgat acgccgcaag gatttgggtc
      181 gaaaatgtcg gcttccgaga acggcaagca cagagcctgg aaaggcaaag ttccgcggac
      241 cttctcccgc tgacaatgct gcgatcaacc gtgtctagcc gaaatcgatg cccagacgtg
      301 cgcaggtcgc cgccaccagc gccgacgcga tgctcaggaa ccgccgacga aaccgccata
      361 acgacaggcg gggcgtgcga tcggcaacgg gtttgcctgg cgcgatcccg tatttcgtca
      421 tccagctcgg atcggcctcg tagcccagtt cgaagagctc cgcatcgatc gagccgtcac
      481 gcgcaatccg gccgcgcaga cgatcgaccc gcagccggca gcagtcgccc tacgcctgga
      541 tgcttcgcac ttcgatcatc tcggtgcccc cgggcgccgc gaactccagc agttcgcctg
      601 cctccgctcc gtcgatcgcg cgggccagcg gcgaggtcca tgcgatcagc ccctgtgcag
      661 gatcggcctc gtcttcaccc actatggtga tgcgcagcgg cttgccggca cggacgatct
      721 cgaccgtcac gccgaagcgc accgaggtcg gcgcctcagg tgtcgcgagc acctgcatcg
      781 aggcctctcg cgccgaccag tagcgaagct cgcggcgcag ctcttgatcg gagatcggcg
      841 ccgtctcgag ggcacggagc agctccacga ccttcgcacg gatcaatcgg gcgccgcgtg
      901 ccgtgacaag attgagcgcc gcacttaccg gcaactccgg cagcacttcc gggagcggct
      961 cgtcgatctc tttggtgaag gcgcggctca tcccgccagc aacgccgggc tttcgaattc
     1021 gatgcgccga cgcgccggcg gcccttgcct ggtgcccacg ttcagctcac ggagcgaccg
     1081 cgacgatcgc cttgatgagc ccgctccgct cgcgcgccca ggccggcagg tccgtggtca
     1141 cctgtccaag gtcggtccgg tgcgtggcga gcgcgtcggt cggcaccttg ccggccagca
     1201 tcgatgccat cacgtggcgg aaatcggcat ccgtcgcgtt gcgcgaagcg cgaatgttca
     1261 gctcccgccg atgcacctcg gcgtccggcc acacgaggtc gccggtcgtc acccccacca
     1321 gggtatagct gccgccattg cgcacctgca gcagcgaggc attcatcgag cggagcgatc
     1381 cggtgccgtc gagcacgacg tcgaagccgc tgccgcgccg gctgaggaac gcgtccgccg
     1441 cgagcccgcc cgccgcaaac gcggcaaagc caagtcccgc tgtcgccgca accttgtcgg
     1501 ctgcggcgtc gaccacgctg acctcgccgc cggcgatgcg cgcaaagatc gccgtgccaa
     1561 gcccgatcgg gccggcaccg accaccagca cccgcgcgcc cagctggatg gcggaacggc
     1621 ggaccgcgtg ggcgccgatg gcgaggaact caaccatcgc ggcatcgcgc agcgacagct
     1681 ctccggccgc atagacgttg cccgccggca ccacgatttc ctcggtcatg ccaccgtcgg
     1741 tgtggacgcc gagcaccttg agcgtctcgc agcaattggg cgtgccgctc acgcaggccg
     1801 gacaatgacc gcaattgagg tagggattga tcaccaccgc ctcgcccgcc gcgaactggc
     1861 tgccgttgcc gtcgaggatg cggcccgaca attcgtgccc gatcacccgt ggatattcga
     1921 ggaacggatg ggtgccttca aagatgtgat agtcggtgcc gcaaatcccc acatgcgcaa
     1981 tgccgacccg cacccacccc ggcctcagtg atggcggcgc gatgtcgatc agctccagcc
     2041 gtccgggttc gacgcaggaa atggcacgca tgcaatggct ccgttcggcg agtggcgtcc
     2101 cttataacga gaaatcgttt ggcggcatgt gttttttatg catatctttc accagcgtca
     2161 cgcgggattg gtccacggaa gacgcaccca aagggagaag gacatgtcat ctaaactgtt
     2221 tggcgcccgc ggcctgctgg ccatctcggc gcttgcgctg accgccggcc tcatcgccgc
     2281 agctccggcc cgcgccgaca ccaccattcc ggtcatcgtc aaggacacca cgtcgccgta
     2341 ctggcagatc gtgctcgccg gcgcctgcca ggccggcaag gacctcaaga tcaacgtgcc
     2401 gcagctcggc gcccagtccg agtccgacat caacggccag atctcgatcc tcgagaacgc
     2461 cgtcgccggc aagccggccg cgatcgtcat ctcgccgacc gaattcaagg ccctgggtgc
     2521 cccgatcgac gaagccgcca aatccgtgcc gatcatcggc atcgactcgg ctgctgactc
     2581 gcaggccttc aagtcgttcc tgaccaccaa caacgagacg ggcggcaaga tcgctgccga
     2641 cggtctcgcg gcggccatcc agaagaagac cggcgccatg aagggcgacg ttgcactgat
     2701 caactcgctc ccgggcgttg gttcgctcac cgcacgcgac aagggcttca ccgaagagct
     2761 ggcggccaag tatcccgacc tgaagctggt ggcgaccaag gttgccgacg gccaagcgac
     2821 gaccggcctc aacatcacca ccgacctgtt gaccgccaac ccgaacctcg tcggcatctt
     2881 cgccgacaac ctgatcatgg gcgagggcgc cggccaggcg atcgccgaga acaaggttgc
     2941 cgacaaggtg gcgctgatca gcttcgacag cgacgacaag acgatcggct tcctcaagga
     3001 cggcaccact gccggcctgc tggttcagga cccctaccgc atgggctacg acggcgtgaa
     3061 gaccgcgctg gccgtgtcgc agggccagac ggtcgacgcc aatgtcgata ccggcgcgaa
     3121 cctcgtgacc ctggacaaca tgagcgaccc caagatctcc gcgctcatca accccaagct
     3181 cgactgcaag taacaaacat gggcgccgct gcctgtcgga tttgacaggg ggcggcgccc
     3241 gtgcctgcat gtcctcgggg gcggaggcgg aaccatgacg acttcggatg tcgcgccggg
     3301 cggcacggct gccgcacaag gcagcgggcg acatgacgga ccaatcctcg agctgcgcaa
     3361 cctcgagaag cactacggcc cggtgcttgc cctgaagccg gcgaccctcg ccttcaagtt
     3421 tgatgagatt cacgccatcg tcggcgagaa cggcgccgga aaatcgacgc tgatcaagct
     3481 gctgaccggc gtcatccgcc gcaccggcgg cgagatctac tggaacggca aagccgttgg
     3541 cctcgacacc ccgcaggaag ccatcgacca cggcatcaac gccgtgcatc aggaggtcgt
     3601 gctctgccgg cacctgtcgg tcgctgccaa tattttcctc ggtgacgaga aggtgaaatg
     3661 gggactgatg cgcaagcgcg agatgaatcg cgccgcgcag gccctgctcg atgacatggg
     3721 cttccatctg cccgcggccg acaccctggg caatctcacc atcggccagc agcagctggt
     3781 cgccaccgcc cgcgcggcgc tgcgcggcac caaattcctg atcttcgacg agcccaccgc
     3841 ctacctcacg cgtcaggaag cggcacagct cttcgcgctg atccgccggc tgcgcgacca
     3901 gggcgtgacc atcgtctata tcagccaccg cctcgaggaa gtattcgagc tcgccgaccg
     3961 cgtctcggtg ctgcgtgacg gcacgctcgt cggcacccgc gacatcaagg acaccaacga
     4021 gaacgaactc gtggccctga tgatcaatcg ctcgatcgaa cagatctacc acaaggagca
     4081 ggtgccgatc ggcgaagtcc tgctcgagac caggaacctg tcgggcaagg gcttcgagga
     4141 catctcgctc agcgttcgcc gcggcgaggt cgtcgggctc tacggcctca tcggcgccgg
     4201 ccgcagcgag ttcgcgatga gcgtcttcgg ccgcaacccc aagagcggcg gccagattct
     4261 gtggaagggc cagccggtcg atatccgcca cgagcgccag gcgatcgcac tcggcatcgc
     4321 catggcgccc gagagccggc gcgaccaggg gctcaatctc aacctgccca taggcttcaa
     4381 catcaacctg cccatctacg accggctgac ccacgggctg acgctgtcgg ggcgcgaaga
     4441 ggcccagcac gccgacaagc agattcgcga cctgtcgatc aagacgccga gccgccgttc
     4501 gctggcgtcc tcgatgtcgg gtggcaacca gcagaagatc gtaatcggca aatggctcaa
     4561 ccacggcgcc gatctcttca tcttcgatga gccgacggtc ggtgtcgatg tcggcaccaa
     4621 ggccgagatt tatcgcctgc tggcgcagct gctgaagaac ggcgccggca tcatcctgat
     4681 ctcgtcctac ctaccggaag tgtacgagct cgccgacacg ctgcacgtct ttcgcaacgg
     4741 ccggctgacg ggcagcaacg gcttccacca ggcgagccac gaaaaagtcc tcgccgaggc
     4801 aatcggcgtc tagggggaga gcaccatgac cacgaccacc gaagccgcct ccaagcaggc
     4861 cgttcgcgcc cggcgcaatt acagcttcct gtttgcgctc accctgctcg gcgtcctcgt
     4921 gctgctgtgg gcgatcctca ctgccgcgac gccgaatttc ctgaccgagc gcaatattcc
     4981 caacctgctg cgccagggct cgatgatcgc tatcctcgcc ctcggcgaga cgttcaccat
     5041 catcaccgcg ggcatcgacc tcagcgtcgg cgccattgcc ggcttcagca cggtcgtgat
     5101 cgccatgctg atccaggccg gcatcccggt ctggctctcg atcgtcatca ctttgctggt
     5161 cgggctggtg atcggcatct tccatgcttt cggcatcacc aagatgggct tgccgccctt
     5221 catcatcacc ctggcgacgc tgacctcgct gcgcggcatc gggctgctga tgaccaacgg
     5281 cgccaccatc agcatcaccg acaagggctt taccgatttc gccacgctcg actggctggg
     5341 catcccgagc ctgttctgga tggtcgtcct gatggcgatc ccgtcctacg tcttcctcaa
     5401 ccacacgcgc tggggccgct acatcttcgc cgtcggctcc aacccggaat cggctcgcct
     5461 gtcgggcgtg cgcatccagc tcatcatcta tctggcgtat tcgctctcgg ccgtgttcgc
     5521 cgcgttcgtc ggcatcctgc tcgccacccg catcggcatc ggcaacgcca cccaggccaa
     5581 tggctgggag ctgcaggcca tcgcctcctc ggtgatcggc ggcacctcgc tgttcggcgc
     5641 cgtcggctcg gtgcacggac cgctgatcgg tgcgtttatc ctcgccacca tcaacaacgg
     5701 cgccaacctg ctcaacgtca actcgttctg gcagcagatc atcaccggcg ggctgatcat
     5761 cctcatcgtc ttcttcgatc agctgcgtcg gcgcagtcgc tagcgcggag cgttcagggg
     5821 gagaccggtg aagaccgacg cggtctacaa gcaggcattc aacaccgcgc tctcgatcat
     5881 ctcgcgcatc gagcccggcc agcgcgtacc atcggaaaat gccctcagca cccagatgca
     5941 ggtcagccgc accaccgtgc gcaaggccct gcaggaactg gccgatcgtg gcctcatcag
     6001 cagcggccgc gacaaggtcg tgctgtcgcg cccgaccgac gccgatcatt tccccggcgc
     6061 cgagacgatc gccacggcgc gccaggtcga gagtcgtttc atggagtgga tgctgcgctc
     6121 cgacctcgag ccgggcagct cgatcaacgt gctggagctg gcgcggctgt tcggcgtctc
     6181 gaccaccggc atccgcgagt tcctcaacgg cttcgcccgc ttcgggctga tcgagaagcg
     6241 gccgaacgcc agctggatct tcaagggcct gacgcacgac tttgcgctcg agctgttcga
     6301 cgtccgcgag ctgttcgagc tgaagagcgc ccgcgccttc atcgccctgc caccggagca
     6361 tcccgcctgg accgagctgc agctgctgcg gcgcgagcac cgcaagctcg ccgccgagct
     6421 cgatgcccgc ttccacgatt tctccgagct cgacgcccgg ctgcaccagc tgatcaacga
     6481 tgcggccgag aaccgcttca tccgcgattt ctacgatgtc atggccttca tcttccacta
     6541 ccactaccag tggaacaaga ctctggaaaa gcagcgcaac ggcgtcgcca tcaaggagca
     6601 catggcctac atcgacgccc tgcgcagccg caactgggcg cgcgtcaagc ctgccgccca
     6661 ggctcacctc ggcaccgcgc gcacgacgct gctcaattcg ctgcagcccg ccgcggcggg
     6721 cgttccaccc cgccgggcgg cgctcgctga accccggccg catcgccgct gaggcaggcg
     6781 tcgcctgggc tcgactgcgc tgctacacgg ctcgcacaca tttgcgcgat cagcccttct
     6841 cccgggaacg ccggccccgt ctaagcgtta ccgccagcga cccaaccccc gagaggatca
     6901 ttccgcatgc cgcttctgca caccgtcaag acaggctgct acgccttaat cgttgcgctc
     6961 gccgtcggcg gccttgcgct gccgacgctc gccgccccgc ccggccctct ggggcctccc
     7021 ggttcgcagc acaaccagat gcatcccaat ccgccgccga tgcagccgtc gttcaacttc
     7081 aacttcggct ttgacgtccc cggcttccgt tttggcatcg gcaacaaggc ttgcctgacg
     7141 gatggacaga tcgttcgcga gctgcgcgcc aagggctact ccaacgtgca gatcgtgagc
     7201 caccacaacc gccacaacgg caacaataac tgggtaaagg tcagcgcccg ccgcggcggc
     7261 catacctata cgttctacat cgactcttgc cgcggcaacg tcggcttctg gtaagcggcg
     7321 cgttcgcaaa aacgacattt catcccggcc agttcactgg ccgggatttt tcatgccggt
     7381 ttctaggcgc tagggccggc aggttgcccg ccgatgcggg tcaccgcctc tgcgccggca
     7441 tctatccccg cccggaggca cctttcgagc aagccgccgc cgagttcgca ggcaatgaag
     7501 gcggcggcga acgcgtcacc ggcgccggtg gtatcgacca catcgcttgg tcgcgccggc
     7561 atcgccagga cgatgccatt gcggtcgccg accgccgccc ctgccgcccc acgcttgatc
     7621 acgacccggc caaagaagcg gccgagcgtc tgcatctgca gcccgaggtc gaccgagccg
     7681 gtgagctcca gcgcttcgtc gagattggcg aagatcgtcc cggcgccggc gctccatttg
     7741 aggaacgcct ccggcccgac ctcgcggagg aaacccaccg acgccggatc gacagcggtc
     7801 gcgacgccgc gggcccgtgc ttccttcagc agcgcaatca cggcggcccg cggcccggac
     7861 gtgaagaacg aatagccgga caccagcagc aggtcgacat cgtcgagcag gctgaacggc
     7921 aggtctgcgg cgctgagatt gagattggca ccgcgatcgg tcagaaaact ccgctcgccg
     7981 tcggtatcga cgatcgagat caggacgccc gatggcgcag tgctatccgg caccagcatc
     8041 gccgtcacgc cgcgcgcgct gaagtagctg agattggcct cgaggtcggc agcagccacc
     8101 cgcgacacga atttcacccg cgcgcccagc gagccgagcc acaccgcctg gttggcggcc
     8161 gatccgcccg ggcgcgaacg gatcacggcg cgtcggtccg agccgcgcac gatcggtccc
     8221 tccggcatca cgatgatgtc ggtgatgacg tcgccgacga cgaggaccga gctcacggct
     8281 agcctcgcgc cgccagcgcc acggcaatcg cggcagccac gcgggcgtta ttctcgacca
     8341 gcgcgatgtt cgatacgagg ctcttgccgc ccgtcatctc gaagatgcgc ttcagcaggt
     8401 acggcgtcag cgccttgcgc gtcactccgg cgcgatccgc gtcggcgacg gccgccgcga
     8461 tcgtcgaggc gatcatctcc gcgtcgagtg catctgccgc aaggatcggg ttggccacga
     8521 ggacgccgcc gaggccgagg ccgaattgcg tctccagcaa ccccgccacc gcttccgggt
     8581 catcgagccg ctgatcgacc ggcaacccgc tggagcgcgt ccagaaggcc gggaactcat
     8641 cggtctggta gccgatcacc ggcacgccgt tggtctccag gacttcgagc gtcttgggga
     8701 tgtcgaggat cgccttggcg ccggcgcaga ccacagcgac cggcgtccgc ccgagttcct
     8761 cgaggtcggc cgaaatatcg aaggtcgctt ctgccccgcg gtgcaccccg ccaatgccac
     8821 cggtcgcaaa cagccggatg cccgccatgt cggccgccat catggtggtc gcgaccgtcg
     8881 tgccggcgat cgccccggaa ctgagcagcg ccgccaggtc gcggcgcgac gccttggccg
     8941 ccgcggcccc ggtctgcgcc agccgttcga ggtcggtgcc gtcgaggccc acccggatgc
     9001 gcccgttcat gatggcgatc gtcgccggca ctgccccgcc ggcccgcacg atggcttcga
     9061 ccttgccggc catctcgagg ttctgcggat acggcatgcc gtgggtgatg atggtggatt
     9121 cgagcgccac caccggtcgt cccgccgaca gcgcgtccgc gacttcgggg ctgatggcga
     9181 gagggtcgcg ggaagccacg gatgatcatc ctttgaggag gccgcacggc cgttggcctc
     9241 ttagagagcc gccgtcacaa gccgtcaaga gccggccaag atcgtggctt cggaagtctt
     9301 gtcggccccc gcgtttggct ctagggtccg cccactgcaa cgctcgtttc ggggacattt
     9361 cactgcgcac gatggtcctc cgtccggacc gccccccgga cctgcccgcg cctcgccgag
     9421 ggcacattgc cgtcattgcc cttcccggcg agccccagcg ccgcttggcc agcctcctcg
     9481 gcatcccatt tccagccgcc gcaacatgac ccttgcggcg gttcagcttt ttcgccaatc
     9541 ccgccccgcg cgggtgcatc caacaaggag acacatcatg aacaagtcgc tcgcgctcgc
     9601 gttgggcgcg ctgctgctga ccggtggcgg cgcgatggcg caggaagagc aggtgctcaa
     9661 cctctataac tggtcggatt atcgcgccga cgataccttg accaacttca ccaagcagac
     9721 cggcatcaag gtcgtcgagg ccaactacga cagcaacgag gcgcttgagg ccaagctggt
     9781 cgccggccac accggctacg acgtcgtggt gccgaccgcc aacttcctcc agcaccagat
     9841 tccgctgggc ctctacctga agctcgacaa gtcgaagatt cccaaccttg ccaatgtcga
     9901 ccccgccatc atgaaggcaa cagccgcctt tgatccgggc aacgtgtatg ccgtcaacta
     9961 catgcgcttc agcctcggca tcggctacaa cgtcgatatg ataaaccagc gcgatgccaa
    10021 cgcgccgacc gacagctttg cgctgttctt cgatcccgac aatgccaaga aatacgccga
    10081 ctgcggcatc gagcttctcg actcgccgca ggagattctg ggcatggccc tcatctatct
    10141 cggcatcgat cccaacagcg agaagccgga cgacctcgcc aaggccgaga aggtcatgga
    10201 cggcatcaag ccgtacatcc gcaagttcga ctcgtcgggc tacatcgacg acctcgccaa
    10261 tggtgatgcc tgtctggtga tgggctactc gggggacatc gccatcgctc aatcgcgggc
    10321 cgccgacgcc aagaacaacg tcaacatcca gtaccgcatc cccaaggagg gaagcatcgc
    10381 cgaatacgac atgatggcga tccccgccga tgccccgcat ccggagaatg ccctcaagtt
    10441 catcaactac atcctgcaac ccgaggtcga ggccgggatc accgatgcgg tgttctacgc
    10501 caaccccgtg cccgccgcga ccaagctggt cgatccgacg atcagcggtg atcccaacat
    10561 ctacccgccg gccgacgtcc aggccaagat gcagggcctg ctgacgcact cgcaggattt
    10621 cacggcgctg atgacccgca cgtggacgcg catcaagacc ggcgactgat cgcctgacgg
    10681 gcggggcaat caccccgccc cttctgcctg gaaaaccgag ttgcttgacc aaccccagcc
    10741 agctcctgac gcgcgtcctt ggcggaatcc caacgccagg ccgttcgtca aaatccgcca
    10801 cgtcaccaag aagttcggtg acgtggctgc ggtcaacgac gtctccctcg acatcttcaa
    10861 gggcgagttg ttctgcctcc tcggcgggtc cggctccggc aagtcgacac tgctgcgcat
    10921 gctcgctggc ttcgaggagc tgacggcggg cagcatcgag atcgatggac aggacatggc
    10981 cggcgtgccg ccctatcggc gccccgtcaa catgatgttc cagtcctacg cgctgttccc
    11041 gcacatgaac gtctggaaca acatcgccta cggcttgaag cgcgaccaca tgccgggccc
    11101 cgatatcgac gcgcgcgtcg atgaactgct gaagctcgtc aagctcgatg gctatgaagg
    11161 ccgtcggccg aaccagctgt ccggtggcca gcgccagcgc gtcgcgctcg cccgtgccct
    11221 cgccaagaag cccaagctcc tgctgctcga tgaaccgctc ggtgcgctcg acaagaagct
    11281 gcgcgaagag acccagtacg agctggtgaa aatccaggaa tccaccggcg tcaccttcat
    11341 cgtcgtcacc cacgaccagg aagaggccat gagcctctcg acccgcatcg gcgtgatgaa
    11401 ccagggcgaa atcgccatgg tgggcgagcc caccgacatc tacgaattcc ccaactcgcg
    11461 ctacgtcgcg ggcttcatcg gctccgtcaa catgttcgag ggcgtcgtca ccgaggacga
    11521 ggacgaccat gtccgcatcc gctcggccga agccggctgc gatatctacg tcagccacgg
    11581 cgtcgactgc gcccccgacc agattctctg gtgggcagtg cggccggaga aaatccggct
    11641 cacccgcgac aggccggaag ccgagttcga
//
LOCUS       DATAZA010000448         1990 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_758489, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000448 DATAZA010000000
VERSION     DATAZA010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1990
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_758489"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..279
                     /locus_tag="VHZ56_11335"
     CDS             <1..279
                     /locus_tag="VHZ56_11335"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX4298603.1"
                     /translation="TFVDHTLPMLRPVLAVAIVLRTIDAFGTFDQVFVLTGGGPGQST
                     LLLSIFGYNTAFKFQETGYAAALFVTMGVLILALALAAVRLLRRVDPT"
     gene            276..1094
                     /locus_tag="VHZ56_11340"
     CDS             276..1094
                     /locus_tag="VHZ56_11340"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX4298604.1"
                     /translation="MIARIARAVVTVIVLVIVFLPIYWMVSTSLKPNREITQDGTLYP
                     HAPSFDNYTHLFSEKQFGSFLVNSVGITVISVAIALAAGSLGAYAIARFRLRFGLERW
                     IGLSLLTLRIVPPVVILIPIYLLMLRLSLLDSWLGLIITYTAINITFCVWMMESFFRE
                     IPLDLEEAAMVDGDSRFTAFRRIVLPLAAPGLAATAIFAVIVTFNEFLFALVLTATPR
                     AMTMPRGTATLIGRIDTDWASMSAAGVVGALPIVIFALLVQRHLVRGLTMGAVK"
     gene            1118..>1990
                     /locus_tag="VHZ56_11345"
     CDS             1118..>1990
                     /locus_tag="VHZ56_11345"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEX4298605.1"
                     /translation="MYTVGQEEIDALTRVIQSKALFRYGVGKECDTFEARYAKYLGSK
                     HFALAASGSNALVAAMIGLGIGPGDEVLIPAHTYMATATSVLTVGAIPVIVDIDESLT
                     IDPKAIEAAIRPRTRAVVPVHMWGTACDMAAIMDIARRHNLLVIEDACQGVGGGYEGR
                     KFGTIGHAGCFSFNYFKNMTCGEGGGVAMDDDTVAERARCAIDPCHFYWHGRSEAEKP
                     FAGNGARPSELMGAMLNVQLDRIDGMIAAMRREKQRILAGTASLGNLGLRASPMRSPN
                     HDCATQVSFTLPSAE"
BASE COUNT          306 a          661 c          666 g          357 t
ORIGIN      
        1 accttcgtcg accacaccct gccgatgctg cggccggtgc tggcggtggc catcgtgctg
       61 cgcaccatcg atgccttcgg cacgttcgac caggtgttcg tgctgaccgg cggcggcccc
      121 gggcaatcga cgctgctgct gtcgatcttc ggctacaaca ccgccttcaa gttccaggag
      181 acgggctacg ccgccgcgct gttcgtgacg atgggcgtcc tcatcctcgc tttggcgctt
      241 gccgcggtgc ggctgttgcg ccgggtggat ccgacatgat cgcccgcatc gcccgcgccg
      301 tcgtcaccgt catcgtgctg gtgatcgtct tcctgccgat ctactggatg gtctcgacgt
      361 cgctgaagcc caaccgcgag atcacgcagg acggcacgct ctatccgcac gcgccgagct
      421 tcgacaacta cacgcatctg ttctcggaaa agcagttcgg cagcttcctc gtgaactcgg
      481 tcgggatcac cgtcatttcg gtcgcgatcg cgctcgctgc cggctcgctc ggggcctacg
      541 cgatcgcgcg gttccggctg cgcttcgggc tcgagcgctg gatcgggctg tcgctcctga
      601 cgctcaggat cgtgccgccg gtggtgatcc tgatcccgat ctacctgctg atgctccggc
      661 tcagcctgct cgacagctgg ctcggcctca tcatcaccta cacggcgatc aacatcacct
      721 tctgcgtgtg gatgatggag agcttcttcc gcgagattcc gctcgacctc gaggaggcgg
      781 cgatggtcga cggcgattcc cgcttcaccg cgttccgccg catcgtgctg ccgctggcgg
      841 cgccgggact tgcggcgacg gcgatctttg cggtgatcgt caccttcaac gaattcctgt
      901 tcgcgctggt gctgacggca acgccgcgcg ccatgaccat gccgcgcggc acggcgacgc
      961 tgatcggccg catcgacacc gactgggcgt cgatgtcggc ggcgggcgtc gtcggggcgc
     1021 tgccgatcgt gatctttgcg ctcttggtgc agcgccatct ggtgcgcggc ctgaccatgg
     1081 gcgcggtcaa atgaacgggg cttgagggag gacgtcaatg tacacggtcg gacaggaaga
     1141 gatcgacgcg ctgacccggg tgatccagag caaggcgctg ttccgctacg gcgtcggcaa
     1201 ggagtgcgac accttcgagg cgcgctacgc gaaatatctc ggcagcaagc atttcgcgct
     1261 ggcggcgagc ggctccaatg cgctggtggc ggcgatgatc gggctcggca tcgggccggg
     1321 cgacgaggtg ctgatcccgg cccacaccta catggcgacg gcgacgtcgg tgctgaccgt
     1381 gggcgccatc ccggtgatcg ttgacatcga cgagtccctc accatcgacc cgaaggcgat
     1441 cgaggcggcg atccggccgc gcacccgggc ggtggtgccg gtgcacatgt ggggcaccgc
     1501 ctgcgacatg gcggcgatca tggacatcgc gcggcgccac aatctgctgg tgatcgagga
     1561 tgcctgccag ggtgtcggcg gcggctacga aggcaggaag ttcggcacca tcggccatgc
     1621 cggctgcttc agcttcaatt acttcaagaa catgacctgc ggcgagggcg ggggcgtcgc
     1681 gatggacgac gacacggtgg ccgaacgggc ccgctgcgcc atcgatccct gccatttcta
     1741 ctggcacggc cgcagcgagg ccgaaaagcc gttcgccggc aatggcgcac ggccgtcgga
     1801 gctgatgggc gccatgctca acgtgcaact cgaccgtatc gacggcatga tcgcggcgat
     1861 gcgcagggaa aagcagcgga tcctcgccgg caccgcctcg ctcggcaatc tcgggctcag
     1921 ggcttcgccg atgcgcagcc ccaaccacga ctgcgcgacg caggtgtcgt tcacgctgcc
     1981 gagcgccgaa
//
LOCUS       DATAZA010000449         2758 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2268816, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000449 DATAZA010000000
VERSION     DATAZA010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2758
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2268816"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..268
                     /locus_tag="VHZ56_11350"
     CDS             <1..268
                     /locus_tag="VHZ56_11350"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX4298606.1"
                     /translation="GLKDGNVDLVLADTAYLGNQAQDSAGTLVTGGPQLMIGVGAGIG
                     VRKDETDLKTKLNTALAEIKADGWLDGEIRKDFPDLGPGPFFGN"
     gene            complement(313..1371)
                     /gene="ugpC"
                     /locus_tag="VHZ56_11355"
     CDS             complement(313..1371)
                     /gene="ugpC"
                     /locus_tag="VHZ56_11355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HEX4298607.1"
                     /translation="MGAVSINNVRKNYGNVEVLHGVSVDIADGEFVILVGPSGCGKST
                     LLRMIAGLEEITAGDISIGGRVVNTLAPKDRDIAMVFQSYALYPHMTVEQNMGFSLKL
                     QRVNREETQRRVAAAAGILGLEPYLKRYPRHLSGGQRQRVAMGRAIVRNPAVFLFDEP
                     LSNLDAKLRVQMRSEIKQNHMRLKTTTVYVTHDQIEAMTMADRIVVMHDGVIEQVGSP
                     LDLYDRPANLFVAGFIGSPAMNMIPGKMDGTSFVAEDGTRINLSKAPAGSAGRPVTLG
                     VRPEHFHLDPNGVAAEILTVEPTGSETQVVARFAGQEIMGAFRERITTAPGQSLKITP
                     EAGAVHLFDTQTGQRIAA"
     gene            complement(1554..2405)
                     /locus_tag="VHZ56_11360"
     CDS             complement(1554..2405)
                     /locus_tag="VHZ56_11360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007813104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX4298608.1"
                     /translation="MSGQASPLRRTPSASALIAVLALVLVVVCLFPFAWMALSSIKKL
                     NELFTVPPHWLPNEPTLANYWTVLFNSNIPRYFLNSVIIAGGATLVALVLAVFASYGF
                     ARFDFRGKVMLQTFVLIGQLLPTAAIIVPLFITLRYLHLINTYWGLILIYTIITLPLS
                     VWMLTSYMRGIPVELEEAATIDGASRLGVLFRITLPLAMPGLVAVVVYSFVTCWNEFV
                     FALVFAQDQSVKTLPIGLAEFSTEFNTDWGGVMAASMVMTVPVVLLFLAFQRLFVGGL
                     TAGATKG"
     gene            complement(2402..>2758)
                     /locus_tag="VHZ56_11365"
     CDS             complement(2402..>2758)
                     /locus_tag="VHZ56_11365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018064091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX4298609.1"
                     /translation="LAGLQAIPADLYEAAKVDGASFWEEVWHVTLPQVRPVLVAVTLL
                     LVIWGLNGITLIFAITQGGPADLSLITPIQIYQMAFVSFQFNEAAALSVLFFIVAAII
                     VAIYIKVIPANLEAAK"
BASE COUNT          518 a          921 c          897 g          422 t
ORIGIN      
        1 cggcctcaag gacggcaacg tcgacctggt gctcgccgac accgcttatc tcggcaacca
       61 ggcgcaggat tcggccggca cgctggtgac cggcggaccg cagctgatga tcggcgtcgg
      121 tgccggcatc ggcgtgcgca aggacgagac cgacctcaag accaagctca acacggcact
      181 ggccgagatc aaggccgacg gctggctcga cggtgagatc cgcaaggatt tccccgacct
      241 cggtcccggc ccgttcttcg gcaactgaga cgcgcgcccc gctgccgcag cagcgggacc
      301 ggctgtttga aactaggcgg cgatccgctg cccggtctgg gtgtcgaaga ggtgcaccgc
      361 gccggcctcc ggcgtgatct tcagcgactg gcccggagcg gtggtgatgc gctcgcggaa
      421 ggcgcccatg atctcttgcc cggcaaagcg ggccaccacc tgcgtctccg atccggtcgg
      481 ctcgacggtg aggatctccg ccgccacgcc gttggggtcg aggtggaaat gctcgggccg
      541 cacgcccagc gtcaccggcc gcccggccga accggccggc gccttgctga ggttgatgcg
      601 cgtcccgtcc tcggcaacga agctggtgcc gtccatcttg cccggaatca tgttcatggc
      661 cggcgagccg atgaagccgg cgacgaacag attggcggga cgatcgtaga gatcgagcgg
      721 cgagccgacc tgctcgatga cgccgtcatg catgaccacg atgcggtcgg ccatggtcat
      781 ggcctcgatc tggtcgtgcg tcacatagac cgtcgtggtc ttcagccgca tgtggttctg
      841 cttgatctcc gagcgcatct gcacgcgcag cttggcgtcg aggttgctga gcggctcgtc
      901 gaacaggaac accgccgggt tgcgcacgat ggcgcggccc atcgcgacgc gctgccgctg
      961 cccgccgctg aggtggcgcg gatagcgctt caggtacggc tcgagcccga gaatccccgc
     1021 cgccgccgcg acccgccgct gcgtctcctc gcgattgacc cgctgcagct tgagcgaaaa
     1081 gcccatgttc tgctcgaccg tcatgtgcgg atagagcgca taggactgga acaccatcgc
     1141 aatgtcgcgg tccttggggg ccagcgtatt gacgacgcgg ccaccgatcg agatgtcccc
     1201 ggcggtgatc tcctcgagtc cggcgatcat gcgcagcagc gtcgacttcc cgcagcccga
     1261 cggcccgacg aggatgacga actcaccgtc cgcgatatcc accgacacgc cgtgcagcac
     1321 ttcgacgttg ccgtagttct tgcgcacatt gttgatgctc accgcaccca ttttcccctc
     1381 cgcccgccgg cctgccggca aaataaacaa caaaagccga cgcgaagagg gtctctctcg
     1441 ctcggcgatg gaacacggtc ggcgacccga ctaccccggc atgcggcgca tccatcaatg
     1501 ccaacgctat cagcaaagat cggacgccgt aaagggcgct cagcgcccgt gacctatccc
     1561 ttggtcgcgc cggcggtgag cccgccgacg aacagccgct ggaaggcgag gaacagcagg
     1621 accaccggca ccgtcatcac catcgaggcg gccatcaccc cgccccagtc ggtgttgaac
     1681 tcggtcgaga actcggcgag cccgatcggc agcgtcttga ccgactggtc ctgcgcgaac
     1741 accagcgcga agacgaactc gttccagcag gtgacgaacg aatagaccac caccgcgacg
     1801 agccccggca tggcgagcgg cagggtaatg cggaacagca cgccgagccg gctagcccca
     1861 tcgatcgtcg ccgcctcctc gagctcgacc ggaatgcccc gcatgtagct ggtgagcatc
     1921 cacacgctga gcggcagcgt gatgatggtg tagatgagga tcagccccca ataggtgttg
     1981 atcaggtgca ggtagcgcag cgtgatgaac agcggcacga tgatcgccgc ggtcggcagc
     2041 aattggccga tcagcacgaa ggtctgcagc atcaccttgc cgcggaaatc gaagcgggcg
     2101 aagccgtatg aggcgaacac cgccagcacc agcgccacca gcgtcgcccc gcccgcgatg
     2161 atgacgctgt tgaggaagta gcgggggatg ttggagttga agagcacggt ccagtagttg
     2221 gccagcgtcg gctcgttggg cagccagtgc ggcggcaccg tgaacagttc gttgagcttc
     2281 ttgatcgagc tcaacgccat ccaggcgaag gggaagaggc acaccacgac gaggaccagc
     2341 gcgagcaccg cgatcagcgc cgaggcgctc ggggtccggc gcagcggcga ggcctgcccg
     2401 ctcacttcgc cgcctcgagg ttggcgggaa taaccttgat gtagatggcg acgatgatcg
     2461 ccgcgacgat gaagaacagc accgacagcg ccgccgcttc gttgaactgg aagctgacga
     2521 aagccatctg gtaaatctgg atcggcgtga tcaggctgag gtccgccggt ccgccctggg
     2581 tgatggcgaa gatcagcgtg atgccgttga gcccccagat caccagcagc agcgtcaccg
     2641 ccaccagcac cggccgcacc tgcggcaggg tgacgtgcca gacctcttcc cagaacgacg
     2701 cgccatcgac cttggccgcc tcgtagagat cggccgggat cgcctgcagc ccggccag
//
LOCUS       DATAZA010000450         3666 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_759303, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000450 DATAZA010000000
VERSION     DATAZA010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3666
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_759303"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1042
                     /gene="clpX"
                     /locus_tag="VHZ56_11370"
     CDS             <1..1042
                     /gene="clpX"
                     /locus_tag="VHZ56_11370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007819824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEX4298610.1"
                     /translation="GQKRAKRVLSVAVHNHYKRLHHATKNQDVELSKSNILLVGPTGT
                     GKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVEKAQRGIV
                     YIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQGGRKHPQQEFLQVD
                     TTNILFICGGAFSGLERIIQARSEGSGIGFSAVVKDPQDRRVGDVLKEVAPEDLVKFG
                     LIPEFIGRLPVIATLEDLDEPALIQILTEPKNALVRQYQRLFAMEDTELTFHDDALKA
                     IAKHAITRKTGARGLRSIMEGILLDTMFDLPSLDGVEEVVISQDVVDNKDARPLYIYS
                     ERKKEEAQATSA"
     gene            complement(1107..1919)
                     /locus_tag="VHZ56_11375"
     CDS             complement(1107..1919)
                     /locus_tag="VHZ56_11375"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEX4298611.1"
                     /translation="MIGASHSRRTPFDRSAGGADPKIMRSLALIGGPRVAFICGCGHS
                     GTTILATILSAHPEIHVPLRESEVFLRRPVNRFRHLLRLRRETSRAGKSYLVEKTPRH
                     IRKLELIRRLVPDARLVILVRDGRDVTSSIGRRENGDLAAGFARWVADTGIAMDQRGK
                     PDSHIVRYEDLVADPGEAIQALCGFLGVPYAATMLDYHAQPRLWYGQKQIERGSGVGT
                     GGQHEKLRNWQVNQPIFDGRGRWKAELPPDYVARFEQGRAREIMDAFGYALD"
     gene            1930..2778
                     /locus_tag="VHZ56_11380"
     CDS             1930..2778
                     /locus_tag="VHZ56_11380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298612.1"
                     /translation="MLRGDDGGNINGPSLIRAPDWLPRRLGTYYLYFAHHTGTYIRLA
                     VADRLEGPWRVYEPGTLKLADATAARDHIASPDVHVDDARRRIVMGFHAPVAGRARQM
                     SFLAQSEDGLAFIADPRPIANFYLRLVPWGKGWIGMSKGGVMYRAPSLDGPFRRLWRP
                     AFPMSGRDANGRGDVRHVALHCEGDRLTVYFSRIGDAPERILAADIDLGRLPMLWRAG
                     PAREVLAPEFEWEGSGLALRPSRAGAAKGPENALRDPAVFMSGGRQLLVYAVAGESGL
                     GLAELL"
     gene            2962..>3666
                     /locus_tag="VHZ56_11385"
     CDS             2962..>3666
                     /locus_tag="VHZ56_11385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019565470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEX4298613.1"
                     /translation="MSDVTSHGAEFDRDRVYPVLPLRDIVVFPGMIVPLFVGREKSVK
                     ALEEVMRDDKHILVVTQKNAQDDDPKPDEIFATGTIASVLQLLKLPDGTVKVLVEGLH
                     RATIDRYLQTEEYFEAEATALPEPDGDAVEIEALARSAQTEFENYVKLNKKISAEVVT
                     AVNQIDNPSKLADTIASHLVIKITEKEDLLSTVSVAERLQKILGLMEGEIGVLQVEKR
                     IRSRVKRQMEKTQREYY"
BASE COUNT          675 a         1165 c         1226 g          600 t
ORIGIN      
        1 cggccagaag cgcgccaagc gcgtgctgtc ggtcgccgtg cacaaccact acaagcggct
       61 gcatcacgcg accaagaatc aggacgtcga gctgtcgaag tcgaacatcc tgctggtcgg
      121 cccgaccggc accggcaaga cattgctggc gcagacgctg gcccgcatcc tcgacgtgcc
      181 gttcacgatg gcggatgcga cgacgttgac cgaggccggc tatgtcggcg aggacgtcga
      241 gaacatcatc ctgaagctgc tgcaggccgc cgattacaac gtcgagaagg cgcagcgcgg
      301 catcgtctac atcgacgaag tcgacaagat ttcgcgcaag tcggacaatc cctcgatcac
      361 ccgcgacgtg agcggcgagg gcgtgcagca ggccctgctc aagatcatgg aaggcaccat
      421 cgcctcggtg cccccgcagg gcgggcgcaa gcatccgcag caggagttcc tgcaggtcga
      481 cacgaccaat atcctgttca tctgtggcgg tgccttctcg ggcctcgagc ggatcatcca
      541 ggcgcgctcc gaggggtcgg gcatcggatt ttcggccgtg gtcaaggacc cgcaggaccg
      601 gcgcgtcggc gacgtgctca aggaagtggc gcccgaggat ctggtcaagt tcggcctcat
      661 tcccgagttc atcggccgcc tgccggtgat cgctacgctc gaggacctcg acgagccggc
      721 gctgatccag atcctgaccg agccgaagaa cgcgctggtg cgccagtacc agcggctgtt
      781 cgcgatggaa gacaccgaac tcacgttcca cgacgatgcc ctcaaggcga tcgccaagca
      841 cgccatcacc cgcaagaccg gggcacgcgg cctgcgttcg atcatggaag gcatcctgct
      901 cgacacgatg ttcgacctgc cctcgctcga cggggtcgag gaggtcgtga tctcccagga
      961 tgtcgtcgac aacaaagacg cccggccgct ctacatctat tccgagcgca agaaggaaga
     1021 agcgcaggcc accagcgcct gaggcttctg ccagcccgaa gatcaagacg ccggggttcg
     1081 tccccggcgt tttcgtctgg aaggcttcaa tcgagcgcgt agccgaaggc gtccatgatt
     1141 tcgcgggcgc ggccctgctc gaaccttgcc acgtagtccg gagggagctc ggccttccaa
     1201 cggcccctgc catcgaagat cggctggttg acctgccagt tgcgaagctt ctcgtgctgg
     1261 ccgccggtgc cgacccctga gccgcgctcg atctgcttct ggccgtacca aagccggggc
     1321 tgggcgtggt agtcgagcat cgtcgcggca tagggaacgc cgaggaaccc gcagagggcc
     1381 tgaatcgctt cgcccgggtc ggcgaccaga tcctcgtagc gcacgatgtg gctgtccggc
     1441 ttgccccgtt gatccatggc gatgccggtg tccgcgaccc agcgcgcgaa gcctgctgca
     1501 agatcgccgt tctcgcgcct tccgatcgag ctggtcacat cccggccgtc ccgcacgaga
     1561 atgacgagcc tcgcatcggg aaccagccgg cggatcagct cgagcttgcg gatatgccgg
     1621 ggggttttct cgacaaggta ggatttgccc gcgcgcgagg tctcccggcg caggcgcaag
     1681 aggtgccgga agcggttgac cggccggcgc aggaagacct cgctctcgcg caaggggacg
     1741 tgtatttcgg ggtgggccga caggatggtg gccagtatcg tggtgccgct gtgtccgcag
     1801 ccgcaaatga aggcgacgcg gggcccacca atgagggcga gagatctcat gattttcggg
     1861 tccgcgccgc cagccgaccg gtcaaacggg gtgcggcggc tgtgcgacgc cccgatcatc
     1921 actccgaata tgctgcgcgg ggacgacggc ggcaacatca atggcccgtc cctgatccgc
     1981 gcgccggact ggttgccgcg gcggctgggg acctactacc tctattttgc gcaccacacc
     2041 gggacctaca tccggctcgc ggttgccgac cggctggaag gtccgtggcg ggtgtacgag
     2101 cccggaacgc tcaagctggc ggatgcaacc gccgcgcgcg atcacattgc ctcgccggac
     2161 gtccatgtgg acgacgcgcg gcggcgcatc gtcatgggat ttcatgcacc ggtggcgggc
     2221 agggcgcggc agatgtcgtt cctggcacag tccgaggacg gactggcgtt catcgccgat
     2281 ccacgcccaa tcgccaattt ctacctcagg ctggtgccat ggggcaaagg ctggatcggc
     2341 atgtcgaagg gcggagtgat gtaccgggcg ccctctctcg acgggccatt ccggaggctc
     2401 tggcgaccgg cgttcccaat gtcgggccgg gacgccaacg gcagaggcga cgtgcggcac
     2461 gtggcgctgc actgcgaagg cgaccggttg accgtgtatt tcagccgcat cggcgacgcg
     2521 ccggagcgca tcctggcggc cgacatcgac cttggccgct tgccgatgtt gtggagagcc
     2581 gggccggcgc gcgaggtgct ggccccggag ttcgagtggg aagggagcgg cctcgcgctg
     2641 cggccgtcgc gcgccggtgc tgcaaagggt cccgagaatg ccttgcgcga ccccgcggtt
     2701 ttcatgtctg ggggacgcca actgctggtt tacgcggtcg cgggggagtc tggactgggt
     2761 ctcgccgaac tgctttgacc cgagcgaggc agcaaggaca cagcagcgtt gcagcttgag
     2821 tccgaaggtt gacttgtcta ggcaacgtga gaccctattt aataagcaga atcaggctgg
     2881 cggcccatct ttggcgccaa tctggttgct gttgggcacg cacctcctcc accctcccgc
     2941 gtgccccgga aaggacaaga catgtcggac gtcacttcgc acggcgccga attcgaccgc
     3001 gaccgggttt acccggtgct gccgctcaga gacatcgtgg ttttcccagg gatgatcgtg
     3061 ccgctgttcg tgggccgcga gaaatccgtg aaggcgcttg aagaggtcat gcgcgacgac
     3121 aagcacatcc tcgtcgtcac ccagaagaac gcgcaggacg acgatcccaa gccggacgaa
     3181 atcttcgcca ccggcacgat cgcgtcggtg ctgcagctgc tgaagctacc cgacggcacc
     3241 gtgaaggtgc tggtcgaggg cctgcatcgc gcgaccatcg atcggtacct gcagaccgag
     3301 gaatatttcg aggcagaagc cacggcactg cccgagccgg acggcgacgc ggtcgagatc
     3361 gaggcgctgg cccggtcggc gcagaccgag ttcgaaaact acgtcaagct caacaagaag
     3421 atctcggccg aggtggtgac cgcggtcaac cagatcgaca atccgtcgaa gctggccgac
     3481 accatcgcga gccacctcgt gatcaagatc accgagaagg aagatctgct ttcgaccgtt
     3541 tcggtggccg agcggctgca gaagatcctc ggcctcatgg agggcgagat cggcgtgctg
     3601 caggtcgaaa agcgcatccg gagccgcgtc aagcggcaga tggagaagac gcagcgcgag
     3661 tactac
//
LOCUS       DATAZA010000451         6427 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1805340, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000451 DATAZA010000000
VERSION     DATAZA010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6427
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1805340"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..782)
                     /locus_tag="VHZ56_11390"
     CDS             complement(<1..782)
                     /locus_tag="VHZ56_11390"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013419234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HEX4298614.1"
                     /translation="MTPSSWTPQSWRQKPITQVPSYPDLDRLAAAERQLSTFPPLVFA
                     GEARELKAQLADVARGEAFLLQGGDCAESFAEHGADHIRDFFRVFLQMAIVLTHGAGK
                     PVLKVGRIAGQFAKPRSSDTETIDGVTLPSYRGDIINDIGFSPAARTPDPERLLLAYR
                     QSAATLNLLRAFSTGGYANLARVHEWTMGFMKDSNAYPRFEEVAKKIDDAIDFMRALG
                     LTPDNTQQLRETRFYTSHEALLLGYEEALTRRDSITGDWYATS"
     gene            complement(839..2212)
                     /gene="gorA"
                     /locus_tag="VHZ56_11395"
     CDS             complement(839..2212)
                     /gene="gorA"
                     /locus_tag="VHZ56_11395"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018239929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004362 - glutathione-disulfide reductase
                     (NADP) activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HEX4298615.1"
                     /translation="MAYDYDLLVIGAGSGGVRAARVAAGYGARVAIVEEDRIGGTCVI
                     RGCVPKKLFVYASRFSDMFDLSGSFGWTVTADFDWPTLVRNKDKEIARLEAAYVAGLD
                     SAGAEIIRDRAVLTGPHGIRLVRSGRELTAGYILVATGGHPSVPKIPGAELGITSNEA
                     FHLEALPHSILIEGGGYIAVEFATIFAGLGVATTIVYRGERLLRGFDDDIRIGLEAGL
                     EERGIKLIYETTIRSLARQGADVLVQFSDEVEAPFGAVMFATGRRANTAGLGLEDAGV
                     TLRPDGAISVDAYSRTAVPSIYAVGDVTGRVALTPVAIREGWYVAETLFNNNPLAVDH
                     SLTGTAVFAEPELGTIGLTETEAATHGDIDVYVTRFRPMISTLSTRMDRVMLKLITGP
                     DGGRVLGVHIVGHGAAEMIQLVAIAVGMGATKADFDRTMAMHPTAGEELVTFKAPTYR
                     YRGGVKA"
     gene            complement(2285..2803)
                     /locus_tag="VHZ56_11400"
     CDS             complement(2285..2803)
                     /locus_tag="VHZ56_11400"
                     /inference="COORDINATES: protein motif:HMM:NF021361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HEX4298616.1"
                     /translation="MTNSKLPRVGKWIALAALALSLAFGAAPVLAQEISPDQLALARK
                     YVDLTDKSGIYEAILVQTAAQTSKLLSGQNPDITDKIDKAIGDILDQYKGKKDDLFNQ
                     FARIYATTFTQDELQQIVTFYSSPVGQKLAGSSMDINNGVRKVMQVYTYNFGTEFVSK
                     VRAELKSQGYNL"
     gene            complement(2838..3530)
                     /gene="rpiA"
                     /locus_tag="VHZ56_11405"
     CDS             complement(2838..3530)
                     /gene="rpiA"
                     /locus_tag="VHZ56_11405"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HEX4298617.1"
                     /translation="MSDDLKRQAAAAALGEVRPGMRLGLGSGTTAWQMVELLAAKVKA
                     GLDIVGVPTSEATAAQARGLGIPLSDLDATPELDLTIDGADEIGPGLALIKGGGAALL
                     REKIVAAASRRMVVIADRSKQVDVLGKFPLPIEVNRFGLGATRLAIQRIMARHRASGG
                     LQLRAQPSGEALVTDGGHLILDAFFGRISDPEALSDDLAGVPGVVEHGLFLKLCRRAY
                     IAGPDGVTTIDA"
     gene            3800..4348
                     /locus_tag="VHZ56_11410"
     CDS             3800..4348
                     /locus_tag="VHZ56_11410"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019963268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEX4298618.1"
                     /translation="MSIAVSAPAMANLFYNPDTNQWEERAVDTQAHGRYSAVPRETVE
                     YDTKFKPGTIVVETEERRLYFVLPGGMAIRYGIGVGRDGFAWSGEHAITRKAEWPGWT
                     PPPEMRKRVPDLPAYMPGGPDNPLGARALYIGATLYRLHGTSEPWTIGQAVSSGCIRL
                     TNEDIIDLYDRVKVGTLVVVHQ"
     gene            4447..5484
                     /gene="moaA"
                     /locus_tag="VHZ56_11415"
     CDS             4447..5484
                     /gene="moaA"
                     /locus_tag="VHZ56_11415"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HEX4298619.1"
                     /translation="MTVLFSQRDIAPAGVVRPLVDRYGRQITYLRISVTDRCDFRCVY
                     CMAEHMDFLPRAEVLSYEEIDDIAAAFVARGTRKIRLTGGEPLVRRDIMRLVEKLGGY
                     LGRGLDELTLTTNGSQLRRHAAALAAAGVRRINVSLDSLDEARFRAITRRGRIADVLD
                     GIDAAEEAGLAIKINMVAMRGVNDDEIEPMMAWAHGRGLGLTLIEGMPLGEVGIDRVE
                     SYLPLRELRERLAQRYTLEPTEHRTGGPARYDWVRETNGVLGFITPMSHNFCESCNRV
                     RLTATGQLYMCLGQEDMVDLRGPLREDGPAALDAALDEAMALKPKGHDFVLDRDHTAP
                     ALTRHMNVTGG"
     gene            complement(5547..>6427)
                     /locus_tag="VHZ56_11420"
     CDS             complement(5547..>6427)
                     /locus_tag="VHZ56_11420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018425652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX4298620.1"
                     /translation="EPSATPLLLIHGWPGSIVEFLDVIGPLTDPVAHGGKASDAFDLV
                     IPSLPGFGFSGPTRDAGWNNGRIGRALLELMSRLGYERFGIQGGDAGAIIGPEIARLA
                     PDRVRGVQVNAATLGFIPMGPIDPAAMARFSPRELVRVQRLQRFMAEHFGFNAIQSSR
                     PLALAYAISDSPAGLLAWISELFTSFGDRPDAVSLDRFLANFMIYWFTGTAASSIRLY
                     YENAHDPLAWSPKANSGVATGVAVFGHDEVPLRLYAEAANTITRWTEFDEGGHYAVLE
                     VPELWVGEIRTFFASL"
BASE COUNT         1037 a         2050 c         2338 g         1002 t
ORIGIN      
        1 gaggtggcgt accagtcgcc ggtgatcgag tcgcggcggg tgagcgcctc ctcgtagccg
       61 agcagcagcg cctcgtggct ggtgtagaac cgcgtctcgc gcagctgctg ggtgttgtcg
      121 ggcgtgagcc cgagggcgcg catgaaatca atggcgtcgt cgatcttttt cgcgacttcc
      181 tcgaagcgcg gataggcgtt cgagtccttc atgaagccca tcgtccattc gtgcacgcgg
      241 gcgaggttgg catagccgcc ggtcgagaag gcgcgcagca ggttgagcgt cgcggcggac
      301 tgccggtagg cgagcagcag ccgctcggga tcgggcgtgc gggcggccgg gctgaagccg
      361 atgtcgttga tgatgtcgcc gcggtaggag ggcagcgtca ccccgtcgat ggtctcggtg
      421 tcggaggaac gcggcttggc gaactggccg gcgatacggc cgaccttgag caccggcttg
      481 ccggcgccgt gggtcaacac gatcgccatc tgcaggaaga cccggaagaa gtcgcggatg
      541 tgatcggcgc cgtgttcggc aaagctctcg gcgcaatcgc cgccctgcag caggaaggcc
      601 tcgccgcggg cgacgtcggc gagctgcgcc ttgagctcgc gcgcctcgcc ggcaaagacc
      661 agcggcggaa acgtcgacag ctgcctttcg gcggcagcga ggcggtcgag atccggataa
      721 gacggcacct gggtgatcgg cttctgccgc cagctttgcg gggtccagct gcttggggtc
      781 atcggcgttg gtccttccgg gagcgggatg tagccctccg ccgcctgccg ggcaagcgtc
      841 aggccttgac gccgccgcgg tagcgatagg tgggcgcctt gaaggtcacc agttcctcgc
      901 cggcggtcgg gtgcatcgcc atggtccggt cgaaatcggc cttggtggcg cccatgccga
      961 cggcgatcgc caccagctgg atcatctcgg cggcgccgtg gccgacgatg tggacgccga
     1021 gcacgcggcc gccgtcgggg ccggtgatga gcttgagcat gacgcggtcc atgcgggtgg
     1081 acagcgtgct gatcatcggg cggaagcggg tgacgtagac gtcgatgtcg ccgtgcgtcg
     1141 ccgcctcggt ctcggtgagg ccgatggtgc cgagctccgg ctcggcgaag acggcggtgc
     1201 cggtcagcga atggtcgacc gccagcggat tgttgttgaa cagcgtttcg gcgacgtacc
     1261 agccctcgcg gatggcaacc ggggtcagcg cgacgcggcc ggtgacgtcg ccgacggcat
     1321 agatcgacgg cacggcggtc cgcgagtagg catcgaccga tatggcgccg tcgggccgca
     1381 gcgtcacgcc ggcgtcctcg agcccgaggc cggcggtatt ggcgcgccgg ccggtggcga
     1441 acatcacggc gccgaacggc gcctcgacct cgtcggagaa ctgcaccagc acgtcggcgc
     1501 cctgccgggc gagggaacgg atagtggtct cgtagatgag cttgatgcca cgctcctcga
     1561 ggccggcctc gaggccgatg cggatgtcgt cgtcgaagcc gcgcagcagg cgttcgccgc
     1621 gatagacgat ggtggtggcg acccccagcc cggcgaagat ggtggcgaat tctacggcga
     1681 tgtagccgcc gccctcgatc aggatcgaat gcggcagggc ctcgagatgg aacgcctcgt
     1741 tggaggtaat gccgagctcg gcgccgggaa tcttgggcac cgaaggatgg ccgccggtgg
     1801 ccacgaggat gtacccggcg gtgagctcgc ggccgctccg cacgaggcgg atgccgtgcg
     1861 ggccggtcag cacggcgcgg tcacggatga tctcggcgcc ggcgctgtcg agcccggcca
     1921 cgtaggcggc ctcgagacgg gcgatctcct tgtccttgtt gcggacgagg gtcggccagt
     1981 cgaagtccgc ggttaccgtc cagccgaagc tgccggagag gtcgaacatg tcggagaagc
     2041 gcgaggcata gacgaagagc ttcttgggca cgcagccgcg gatgacgcag gtgccgccga
     2101 tgcggtcctc ttcgacgatg gcgacgcggg cgccgtagcc cgccgcgacg cgtgccgcgc
     2161 gcactccgcc cgagccggcg ccgatcacca ggaggtcgta gtcgtaagcc atggcctgcc
     2221 gggtcgcatg aaaaagaacc ccgcacaagg cggggctccg gaaaatcgac ggatcgcggg
     2281 aacgctagag gttgtagccc tgggacttga gctcggcgcg gaccttgctc acgaactcgg
     2341 tgccgaaatt gtaggtgtag acctgcatca ccttgcggac gccgttgttg atgtccatcg
     2401 aggacccggc cagcttctgg ccgacgggcg aggagtagaa ggtgacgatc tgctgcagct
     2461 cgtcctgggt gaaggtggtc gcgtagatgc gggcgaactg gttgaagagg tcgtccttct
     2521 tgcccttgta ctggtcgagg atgtcgccga tggccttgtc gatcttgtcg gtgatgtccg
     2581 ggttctgccc cgacagcagc ttgctggtct gcgccgcggt ctgcacgagg atcgcctcgt
     2641 agatgccgga cttgtcggtg aggtcgacgt atttgcgggc gagcgccagc tggtcgggcg
     2701 agatctcctg ggccagcacc ggcgcggcac cgaaggccag cgacagcgcc agggccgcca
     2761 gcgcgatcca cttgcccact cgcggcagct tgctgttcgt catgttgtct cagacccccg
     2821 ttcggcgacg cggcgcgtca cgcatcgatt gttgtcacgc cgtccggtcc ggcgatgtag
     2881 gcccggcggc aaagcttcag gaaaagcccg tgctcgacga cccccggcac gccggcgagg
     2941 tcgtcggaga gcgcttctgg atcggaaatg cggccaaaaa aagcatccag gatcaggtgg
     3001 ccgccatcgg tcacgagggc ctcgccagac ggctgggcgc gcagctgcaa gccgccggag
     3061 gcgcggtgcc gggccatgat gcgctggatc gcgaggcggg tggcgccgag gccgaagcga
     3121 ttgacctcga tgggcagcgg aaatttgccg agcacgtcga cctgcttgga ccggtcggcg
     3181 atcaccacca tccgccggga ggcggcggca acgatctttt cgcgcagcag cgcggcgccg
     3241 ccgcccttga tcagcgcgag gccgggaccg atctcgtcgg cgccgtcgat ggtgaggtcg
     3301 agctcgggcg tcgcgtcgag gtcgctgagt ggaatgccca ggccgcgggc ctgcgccgcc
     3361 gtcgcctcgg aggttggcac gccgacgatg tcgaggcctg cctttacctt tgcggcgagg
     3421 agctcaacca tctgccaggc cgtcgtcccg ctgccgaggc cgagccgcat ccccggccgc
     3481 acttcgccga gcgccgccgc cgctgcctgc cgcttgagat cgtcgctcac gccctgcctc
     3541 cgcgggccgt gctaagagcc ggaccagaca gtgtcaacag agggtttcac gcgttggtga
     3601 ttggcgattg tcgctttgcc gcaacagact tggcaataga accctgcagg ctcgcggatt
     3661 cgggggtcga gtctcttccg gcccgactgc aatttggcta atcaatccag acgatccgcc
     3721 gggccaggct ccccggtgtc gctcgaggca aatgatgaat ggactgaaac tggcattggc
     3781 cgctggactt gcggccctca tgagcatcgc ggtcagcgca ccggcgatgg ctaatctgtt
     3841 ctacaacccc gacaccaatc aatgggaaga gcgggcggtc gatacccagg cgcatggacg
     3901 ctattcggcg gtgccgcgcg aaacggtgga gtacgacacc aagttcaagc cgggcacgat
     3961 cgtcgtcgag acggaagagc ggcggctcta cttcgtgctc cccggcggca tggcgatccg
     4021 ctacggcatc ggcgtcggtc gcgacggttt tgcgtggtcc ggcgagcatg cgatcacgcg
     4081 caaggccgag tggcccggct ggacgccgcc gccggaaatg cgcaagcgcg tgcccgacct
     4141 gccggcctac atgcccggcg gcccggacaa cccgctcggg gcgcgggccc tctatatcgg
     4201 ggcgacgcta taccggctgc atggcacgtc ggagccctgg accatcggcc aggcggtctc
     4261 ttcgggctgc atccggctca ccaacgagga catcatcgat ctctacgatc gcgtaaaggt
     4321 cggcacgctg gtggtcgtcc accagtagcg gccgaggggg ctcggtcatc gatcaggccg
     4381 gtccgcaggg gccggccttt tcgtttgcgg taccaatcgg cgcgcccgcg cggtaaagct
     4441 ctgccaatga ccgtgctgtt ttcacaacgc gacatcgcgc cggccggagt ggtgcggccg
     4501 ctcgtcgacc gctacgggcg gcagatcacc tatctccgga tcagcgtcac cgaccgctgc
     4561 gacttccgtt gcgtctactg catggccgag cacatggact tcctgccgcg ggcggaggtg
     4621 ctgagctacg aggagatcga cgacatcgcg gcggcgttcg tggcgcgcgg gacgcgcaag
     4681 atccggctga ccggcggcga gccgctggtg cggcgcgaca tcatgcggct ggtcgaaaag
     4741 ctcggcggct atctcggccg cggcctcgac gagctgacgc tcaccaccaa tggcagccag
     4801 ctgcgacgcc atgcggcagc gctcgcggcg gccggggtgc gacgcatcaa cgtgtcgctc
     4861 gacagcctcg acgaggcgcg gttccgtgcc atcacgcggc gtggccggat cgccgacgtg
     4921 ctcgacggca tcgacgccgc agaggaggcc gggctcgcga tcaaaatcaa catggtggcg
     4981 atgcgcggcg tcaacgacga cgagatcgag ccgatgatgg cgtgggcgca cgggcgcggg
     5041 ctcgggctga cgctgatcga gggcatgccg ctgggcgaag tcggcatcga ccgcgtcgag
     5101 tcttacctgc cgctgcgcga actgcgcgag cggctggcgc agcgctacac gctcgaaccg
     5161 acggagcacc ggaccggcgg gccggcgcgc tacgactggg tcagggaaac caatggcgtc
     5221 ctcggcttca tcacgccgat gagccacaat ttctgcgaga gctgcaaccg ggtgcggctg
     5281 acggcgacgg ggcagctcta tatgtgcctt gggcaggagg acatggtcga cctccgcggg
     5341 ccgctgcgcg aggatggtcc ggcggcgctg gatgcggcgc tggacgaggc gatggcgctg
     5401 aagccgaagg gccacgactt cgtgctcgac cgcgaccaca cggcccctgc cctcacccgg
     5461 cacatgaacg ttaccggcgg atagcgcggc ggcaagacgt cgagccggca tggcgaccgg
     5521 cccgacgcgt cgaggtcgac ggtcaatcag aggctcgcga aaaacgtccg gatctcgccc
     5581 acccacagct ccggcacctc gagcacggcg tagtggccgc cttcgtcgaa ttcggtccag
     5641 cgggtgatgg tgtttgccgc ctctgcgtag agccgcagcg gcacctcgtc atggccgaac
     5701 accgcgacgc cggtggcgac gccggagttg gccttcgggc tccaggcgag cggatcgtgg
     5761 gcattctcgt agtagaggcg gatcgaggat gcggccgtgc cggtgaacca gtagatcatg
     5821 aagttggcga ggaagcggtc gaggctgacg gcgtccggcc ggtcgccgaa gctggtgaag
     5881 agctcgctga tccaggccag caggccggcg ggcgaatccg agatcgcgta ggcgagcgcc
     5941 agcggccggc tcgactggat ggcattgaag ccgaaatgct cggccatgaa gcgctgcagg
     6001 cgctgcacgc gaaccagctc gcgcgggctg aagcgggcca ttgccgccgg atcgatcgga
     6061 cccatcggga tgaaccccag cgttgcggca ttgacctgga cgccgcggac gcgatcgggc
     6121 gcaaggcggg cgatctcggg tccgatgatg gcgccggcat cgccgccctg gatgccaaac
     6181 cgctcatagc cgagccggct catcagctcg agcagggccc ggccgatgcg gccgttgttc
     6241 cagccggcgt cgcgggtcgg gccggagaac ccgaaaccgg gcagcgacgg gatcaccagg
     6301 tcgaacgcgt ccgatgcctt gccgccatgg gcgaccggat cggtcagcgg gccgatgacg
     6361 tcgaggaact cgacgatcga gcccggccag ccgtggatca gcagcagcgg cgtcgccgac
     6421 ggctcgg
//
LOCUS       DATAZA010000452         5738 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3431004, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000452 DATAZA010000000
VERSION     DATAZA010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5738
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3431004"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..240
                     /locus_tag="VHZ56_11425"
     CDS             <1..240
                     /locus_tag="VHZ56_11425"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX4298621.1"
                     /translation="YPASKAALNAITLAMMVELESSPIKVNLVSPGFTKTNLNGYEGT
                     QSVEDGSREVVRVALLGPDGPNGTFTRWENQTIPW"
     gene            complement(313..1347)
                     /gene="ltaE"
                     /locus_tag="VHZ56_11430"
     CDS             complement(313..1347)
                     /gene="ltaE"
                     /locus_tag="VHZ56_11430"
                     /EC_number="4.1.2.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low-specificity L-threonine aldolase"
                     /protein_id="HEX4298622.1"
                     /translation="MTSIRDDFRSDTVTRPSPGMRQAMAEAEVGDDVFGDDPTVRRLE
                     AAMAERLGKPAAVFMASGTQSNLAALLAHCGRGDEYIAGMDAHCYAHEQGGAAWIGGI
                     QPQPIVHQPDGTLALADIAAAIKPDDLHYARTRLLALENTLGGRVIPLTYLNDATALA
                     RSHGLGTHLDGARVFNAVVATNADVAEMARPFDTISVCLSKGLGAPVGTVLVGEAALI
                     GAARRHRKALGGGMRQAGILAAAGLYALEHNVARLAEDHANARRLAEAFARIPALTVT
                     MPDTNIVWVTVAPDTATPFADFLARDGIGITGGYGGVAQRWVTHLDVDEAAVDRAIGA
                     AEQFYERARF"
     gene            1741..1953
                     /locus_tag="VHZ56_11435"
     CDS             1741..1953
                     /locus_tag="VHZ56_11435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016920552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX4298623.1"
                     /translation="MATGTVKWFNGQKGYGFIQPDEGGADVFVHISAVQRSGLNGLDE
                     GQKVNYEIVKDKRTGKSAADNLSMAS"
     gene            2080..3147
                     /locus_tag="VHZ56_11440"
     CDS             2080..3147
                     /locus_tag="VHZ56_11440"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEX4298624.1"
                     /translation="MSASGRPDQFVALAGLRGVAALVVLQWHAQRVIFGPVLPGGYLA
                     VDFFFLLSGWVLAHAYDRRLADGLTVRQFMRLRLIRLYPVYLLAVLMMLAGWALGGRL
                     SLPGPLLALLFLPDLLAPGLDWVVAPAWSLAAELAANIPFAACHKGLTTRVLAATALL
                     SAAALAWWALTAGGLDLGYLPSTRLGMFARVFYSFPLGVLLYRHRARLAGWAPRWSAW
                     PACGLLLLILAIPAPPPLRGLADLATVLVLLPLALLFAANAAAGPATIRLMGALGAVS
                     YPLYLIHMPLLLGADALDQVLTGQSIIDLPPAGGLALILAIIGLAWLVDRFYDQPIRR
                     WLSTVGSAAAKPAPLAAEPTA"
     gene            3459..4046
                     /locus_tag="VHZ56_11445"
     CDS             3459..4046
                     /locus_tag="VHZ56_11445"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX4298625.1"
                     /translation="MKPRKRLTGDERRESILEAALGCFLEKGYIATTINDIREASGAT
                     TGSIYHFFDGKGALAMALLEDAIAGWSGESMASSETPEAVIKATAAGLVSWGLKNPEL
                     FRFTDEIRTLAVTAPEFADIADTLAEGQGSVATAYAKFVKARKVKDLPWPAAHSLILG
                     PAYNYLRLATTGRARIAAKRAAEIFADAAWAAVKG"
     gene            4230..4703
                     /gene="greA"
                     /locus_tag="VHZ56_11450"
     CDS             4230..4703
                     /gene="greA"
                     /locus_tag="VHZ56_11450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEX4298626.1"
                     /translation="MDKIPMTPAGHATLSEEYRQRTSEGRPKIIAAIAEARAHGDLSE
                     NAEYHAAKEQQSLNEGRIQELEALLALAEIIDIKKLSGTTVKFGATVKILDQDTEEER
                     RYIIVGDAEADAGKGRISISSPIARAMIGKQKGDSFEVAAPGGSRSYEILDLKYV"
     gene            4918..>5738
                     /gene="trxB"
                     /locus_tag="VHZ56_11455"
     CDS             4918..>5738
                     /gene="trxB"
                     /locus_tag="VHZ56_11455"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEX4298627.1"
                     /translation="MHSKVIIIGSGPAGYTAAIYAARAMLEPVMINGIQPGGQLTITT
                     DVENYPGFADVIQGPWLMEQMQAQAEHYGTRIVNDLIVDVDFDRRPFTLTGDSGKTYT
                     ADSVIVATGAQARWLGLPSEQKFQGFGVSACATCDGFFYREKHVLVIGGGNTAVEEAL
                     FLTNFASKVTVIHRRSEFRAERILQERLFKHPKVEVRWNTELADITGTQMPPSVTGAV
                     LRDTRSGKTEALSVDGIFVAIGHTPATAIFQGKLDMKPGGYLAVKPGTTQTNIPGV"
BASE COUNT          938 a         2075 c         1747 g          978 t
ORIGIN      
        1 tatccggcat cgaaggcggc gctcaatgcc attacgctgg cgatgatggt cgagctggaa
       61 tcgagcccga tcaaggtgaa cctcgtctct cccggtttca ccaagaccaa cctcaacggc
      121 tacgagggca cgcaatcggt cgaggacgga tcgcgcgagg tggtgcgtgt cgccctgctc
      181 ggcccggacg gtcccaacgg caccttcacg cgctgggaaa accagacgat cccgtggtga
      241 tcgatgggtg agaccacccg gcgctcgtga acgcacgctc cgagcggcgg gttgtgaacg
      301 ccggtgaccg tctcagaacc gcgcccgctc gtagaattgc tccgccgcgc cgatggcccg
      361 gtcgacggcc gcttcgtcga cgtcgagatg cgtcacccag cgctgcgcca ccccgccata
      421 gccgccggtg atcccgatgc cgtcgcgcgc caggaaatcg gcgaacggcg tcgccgtgtc
      481 cggcgcgacc gtgacccaga cgatattggt gtccggcatg gtcaccgtca gcgccgggat
      541 cctggcgaag gcctccgcca gccggcgcgc attggcatga tcctccgcca gccgcgccac
      601 attgtgctcg agcgcgtaga gaccggccgc cgcgaggatg cccgcctgcc gcatgccgcc
      661 acccagcgcc ttgcggtgcc ggcgcgccgc gccgatcagt gccgcctcgc ccaccagcac
      721 ggtaccgacc ggcgcgccga gccccttgct caggcagacc gagatcgtgt cgaacggtcg
      781 cgccatctcc gcgacgtcgg cgttggtggc aaccaccgcg ttgaacaccc gcgcgccgtc
      841 gagatgcgtc cccagcccgt gcgaccgggc aagcgcggtg gcgtcattga gataggtcag
      901 cgggatcacc cgtccgccca gcgtgttctc gagcgccagg agccgcgtgc gcgcatagtg
      961 caggtcgtcc ggcttgatcg ccgcggcgat gtccgcaagc gccagcgtgc catcgggctg
     1021 atgcacgatc ggttgcggct ggataccgcc gatccaggcc gcgcccccct gctcgtgggc
     1081 gtagcaatgc gcgtccatgc cggcgatgta ttcatcgccg cggccgcaat gggccagcaa
     1141 cgccgccagg ttcgactgcg tgcccgaggc catgaacacc gccgccggct tgcccagccg
     1201 ctcggccatc gccgcctcga gccgccgcac cgtcggatcg tcgccgaaca cgtcgtcgcc
     1261 gacttcggcc tcggccatgg cctgccgcat cccgggcgac ggccgggtta cggtatcgga
     1321 acggaagtcg tcgcggatcg aagtcatcgg ggcctgcaaa gcgcttgggg gatcggtgcg
     1381 agtttactgg acgctgcccc atccctgacg taaacgtcaa attctcttgc cgtcccggac
     1441 aggaaccgcc tcccgcggtc catgttatgg gatttgggtc ccgatggacc cgaagcgtcg
     1501 cattgagcag ttttcttgac cctgcacggc cccccgccgg cgcagcgatt cgtcatgcct
     1561 gcgacatatt gtgcgcgtta acaattcagg ctaaaacctt ttcatcgaat attgcggccc
     1621 gaccgtccgt gcctggcgac gcctcaacgc gcctgctgac gtcactaccg agatttcgat
     1681 tggcgaagtc ttccaatggt ttggggggca gctacggcag agactgcgag agggacttat
     1741 atggctaccg gcactgtaaa atggttcaac gggcagaagg gctacggctt cattcagccc
     1801 gacgagggcg gggcggacgt gttcgtgcac atctccgcgg tccagcgctc gggcctcaac
     1861 ggcctcgatg agggccagaa ggtcaactac gagatcgtca aggacaagcg gaccggcaag
     1921 tccgctgccg acaatctctc catggcgtcg taagactccg ctccgaactc ggcatcgact
     1981 ggaaggcgtg gctccgcgtg ggctgcgcct tctcgtcttt tcgacgaatg cccgcgcggt
     2041 cttccgcagt tgttaaccgg ccaccgccca cgatccggca tgagcgcttc cggccgcccg
     2101 gaccagtttg tcgccctcgc cggcctcagg ggcgtcgccg ccctcgtcgt gctgcaatgg
     2161 cacgcccagc gggtgatctt cggcccggtg ctgcccggcg gctacctggc ggtcgatttc
     2221 ttcttcctgc tcagcggctg ggtgctcgcc catgcctacg accggcgcct tgccgacggc
     2281 ctcaccgtgc ggcagttcat gcgcctccgc ctgatccgcc tctacccggt ttacctgctg
     2341 gccgtgctga tgatgctcgc cggatgggcg ctcggcggcc ggctgagcct gcccggcccg
     2401 ctcctcgccc tgctgttcct gcccgatctg ctggcgcccg gcctcgactg ggtcgtcgcc
     2461 ccggcctgga gcctcgccgc cgagcttgcc gccaacattc ccttcgccgc ctgccataag
     2521 ggcctgacga cgcgcgtcct tgccgcgacg gcgctgcttt cggcggcagc gctggcctgg
     2581 tgggcgctga ccgctggagg actcgacctc ggctatctgc cgagcacccg cctcggcatg
     2641 ttcgcccggg ttttttactc gttcccgctc ggtgtgctgc tgtaccgcca tcgggcgagg
     2701 ctcgccggat gggcgccgcg ctggtccgcc tggccggctt gcggcctgct gctcctgatc
     2761 ctcgccatcc ccgcaccgcc gccgctgcgg ggcctggccg atctggcgac cgtcctcgtc
     2821 ctgctgccgc tggccctgct tttcgccgcc aatgcggccg ccgggccggc cacgatccgg
     2881 ctgatgggag cgctgggcgc cgtttcctac ccgctttacc tcattcacat gcccctgctg
     2941 ctcggcgccg acgcgctcga ccaggtgctg accggccaga gcatcatcga cctgccgccg
     3001 gccggtggcc tggccctgat cctcgccatc atcggcctcg cctggctggt cgaccgcttc
     3061 tacgaccagc cgatccggcg ctggctttcg accgtcggca gcgcagccgc caagcccgcg
     3121 cccctcgccg ccgagccaac ggcctagccg cctaccaacc accgttgcta gccttcgggc
     3181 gccccagcgg actgtggcgc caagggatga tcgctatata aaacagttac ttaggcacgt
     3241 tctcctgcac catcttctga gcagaatggg cgcaacaccg ccgttttttg ccttgacctc
     3301 gtcatcttcc tgccgcaagt ccgctgctct cccctgattt gtccaaaacc ccaacaaaac
     3361 gctcgactag aaattcgctc tagtccatgc tggaagtcaa ttccagagaa ttcttttagt
     3421 gaaagggacc cccaatggct cgcgcagccg caaaaaaagt gaagccccgc aagcgtttga
     3481 ccggtgacga gcgccgcgaa tcaattctcg aggcagctct cggctgtttc ctcgaaaagg
     3541 gctacatcgc caccacgatc aacgacatcc gcgaggcctc cggcgccacc acggggtcga
     3601 tctatcactt cttcgacggc aagggcgcct tggccatggc cctgctcgag gacgccatcg
     3661 ccggctggtc cggcgaatcc atggccagca gcgagacgcc cgaagcggtg atcaaggcca
     3721 ctgccgccgg cctcgtcagc tgggggctga agaaccccga actgttccgc ttcaccgacg
     3781 aaatccgcac tctggccgtc accgcccctg aattcgccga tatcgccgac accctcgccg
     3841 aaggccaggg ctcggtggca accgcctatg cgaaattcgt caaggcccgc aaggtcaagg
     3901 acctgccgtg gccggccgcg cattcgctga tcctcgggcc cgcctacaat tacctgcgtc
     3961 tcgcgaccac cggacgcgcc cgcatcgccg ccaagcgcgc cgccgaaatc ttcgccgacg
     4021 ccgcctgggc ggccgtgaag ggctgaatct tgcgttgccc ggcggggttt tcgagccccg
     4081 ccgggcctgc cgcttgaccg cggcgcgccc gaagggcagt ttgcatcgtt ccctgacatc
     4141 cccgtccgcc gcacgccgaa cgaggcgggc ccgggatttt tgacttcgcc gatccgctcg
     4201 cgggccggct gcacgacgtg gagacgacga tggacaagat tccgatgacc ccggccggtc
     4261 atgccacgct gagcgaggag taccggcagc gcacgtccga gggccgtccg aagatcatcg
     4321 cggcgatcgc cgaggcccgc gcccacggcg atctctccga aaatgccgaa tatcatgccg
     4381 ccaaggagca gcagagcctg aacgagggcc gcatccagga gctcgaggcg ctgctggcgc
     4441 tggccgagat catcgacatc aagaagcttt ccggcacgac ggtgaaattc ggcgccaccg
     4501 tcaagatcct cgaccaggac accgaggagg agcgccgcta catcatcgtc ggcgacgccg
     4561 aggcggacgc cggcaagggc cggatctcga tttcctcgcc catcgcccgc gccatgatcg
     4621 gcaagcagaa gggcgacagc ttcgaggtag ccgcccccgg cggctccagg agctatgaga
     4681 ttctcgacct caaatacgtc taaacccgga gaagagggcg cctttcagcc gccgcaagca
     4741 atacccgcgg gttctcgtcc tcccagcgtg acccgattgc ccaattcgcg ggcaaacgcg
     4801 ccccggttgt gacttttcgg tgcggtcgcc cgacattccg ggcgtttgcg ccccggcgca
     4861 gcttgaaacg ccctacccca cccaactatc ttaggaacct aggagaggaa gcgtctcatg
     4921 cactccaagg ttatcatcat cgggtcggga ccggccggct acaccgcggc gatctatgcg
     4981 gcccgcgcaa tgctcgagcc ggtgatgatc aacggcatcc agcccggcgg ccagctgacc
     5041 atcaccaccg atgtcgagaa ctaccccggc tttgccgacg tcatccaggg cccctggctg
     5101 atggagcaga tgcaggccca ggccgagcat tacggcaccc ggatcgtcaa cgacctgatc
     5161 gtcgatgtcg acttcgatcg tcgccccttc accctcaccg gcgacagcgg caagacctac
     5221 accgccgatt ccgtgatcgt cgcgaccggc gcccaggccc gctggctggg gctgccgtcc
     5281 gagcagaaat tccagggttt tggcgtctcc gcctgcgcca cctgcgacgg cttcttctat
     5341 cgcgagaaac atgtgctggt gatcggcggc ggcaacaccg cggtcgagga agcgctgttc
     5401 ctcaccaatt ttgcctccaa ggtcaccgtc attcaccgcc gctcggaatt ccgtgccgag
     5461 cgcatcctgc aggagcggct gttcaagcac cccaaggtcg aagtgcgctg gaacaccgaa
     5521 ctcgccgaca tcaccggcac ccagatgccg ccctcggtca ccggcgccgt gctccgcgac
     5581 acccgcagcg gcaagaccga ggccctctcc gtcgacggca tcttcgtcgc catcggccac
     5641 actccggcga ccgccatctt ccagggcaag ctcgacatga agccgggcgg ctatctcgcc
     5701 gtgaagccgg gaaccacgca gaccaacatt cccggcgt
//
LOCUS       DATAZA010000453         6171 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_525932, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000453 DATAZA010000000
VERSION     DATAZA010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6171
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_525932"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..289
                     /locus_tag="VHZ56_11460"
     CDS             <1..289
                     /locus_tag="VHZ56_11460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008190800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEX4298628.1"
                     /translation="WLFPAHGEDGHLSRQVFGRDLKSLAGRAGIGSARIAPHVLRHAF
                     ASHLLQGGADLRVVQTLLGHADISTTQIYTHVLDEKLRTLVETHHPLAEKD"
     gene            292..876
                     /locus_tag="VHZ56_11465"
     CDS             292..876
                     /locus_tag="VHZ56_11465"
                     /inference="COORDINATES: protein motif:HMM:NF014724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEX4298629.1"
                     /translation="MRWLLRIGGAIVLVAVLAFSGIAADIALYSRRSDPGPADAAVVL
                     GAAVLGRVPSPVFAERLRHAVELYKAGTVRKIVVSGGLAPGDALSEAVAGRDWMVAEG
                     VPAADVLTEDQSHTTRQNIANVAPVLAANGLHHVLIVSDPLHMQRAMAMADGDHMDAA
                     PSPTPTTRFQSFGTEAPMLMSETWSLIAYWLTGS"
     gene            complement(855..1403)
                     /locus_tag="VHZ56_11470"
     CDS             complement(855..1403)
                     /locus_tag="VHZ56_11470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEX4298630.1"
                     /translation="MSLEIVGHAIVSADGRIADRDHRMPAALRSEADWQRFQAALDAA
                     ALVVLGRLGHEAHANPGRRRLVATRRVASLAPDPADPRATLWNPAGIDFDAALGALDI
                     PHGIVAVTGGTGVFDLFLARFIRFDLARVPAVTLPDGLPCFSAGPPDMVLAAARLRPD
                     PAVVLDPRTSLAVWRRYDPVSQ"
     gene            1573..3357
                     /locus_tag="VHZ56_11475"
     CDS             1573..3357
                     /locus_tag="VHZ56_11475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298631.1"
                     /translation="MLTISKVALVAAVLSLAPAGLMPALADDASSSSQAPADTSTTTG
                     GFSVQLSIPTVTAVDSTMDEAAIRDALTGGFMKHVDDLAKLNATTITIPEIDLTMNTV
                     ENGTAMNTQAVYKDLVLSSVKNGVAASVSIGSSQSTNPEGTFVFNGMSLTNFDIGGTL
                     ALYSLVNGDATAAMKPLYTAMAFSGGTFSGPKVSCSIGQVATTEADARPLKVSIQAMM
                     DAANQVSAGGDTPPPAAFKTVVSFFTDLLQAFKTSPLTVGPISCKGTGDDGKPGEFDI
                     GGISMDGLQPGLYPAITVKGLKFSDTDTTVSLDEAVAKATDLSQPIAAVNAAGDDLSP
                     AWFQANYRKVIPAWAGLSFSGLSVDTPNPDTPSEKLSVKVDKFDLSFSDYVNGVPSKI
                     SNSASGVDVPLEQNSTDSNIQMLEALGINRVTMGYEFSASWDKANQAINIDKISFNGQ
                     DLGGFAVAAVLGNATADLFDSDANTESNAALGLTVKSIKIDANDAGIGDKLMPMLAQQ
                     QGADAATYRAQAAATAEAATIEMLGSTDAARQLGAALSDFVAGKAKSITVNITSKDPA
                     GVAMPALMAASDDPSTLQGQVDITGSAQ"
     gene            3445..4404
                     /locus_tag="VHZ56_11480"
     CDS             3445..4404
                     /locus_tag="VHZ56_11480"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEX4298632.1"
                     /translation="MQSYLDFEKPVADLEGKIAELRSLSGDDKAVSIDEEVSALTARA
                     DQALADIYKRLTPWQKTQVARHPQRPHFSDYIKALISEWTPLAGDRKYAEDPAVQAGF
                     GRFNGTPLAIIGQEKGSNTETRLKHNFGMAKPEGYRKAVRIMDMADRFSIPVVAFIDT
                     AGAYPGIGAEERGQAEAIARCTEKCLELGVPNLAIIIGEGGSGGAIAIATANRVLMLE
                     NAIYAVASPEASASILWKDAARAMDAANNMKITAQDLMGFGVIDGIVPEPAGGAHRHA
                     DAVMAAAGAAISDFLARFPGTRGRLEVREQRREKFMAIGSALN"
     gene            4503..5558
                     /locus_tag="VHZ56_11485"
     CDS             4503..5558
                     /locus_tag="VHZ56_11485"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase family protein"
                     /protein_id="HEX4298633.1"
                     /translation="MLLSPRRLIGLVAVVLALFALAGCAGILPRSSPLKADQKLSQDA
                     MNRLAAIGSTPGAAMMIRIFKQSNEFEVWKQSSSGQFKLFKTYAICAWSGVLGPKVVE
                     GDRQAPEGFYNITPAQLNPNSNYYLSFNTGFPNKFDRAWGRTGANLMVHGDCSSAGCY
                     SMTDASAEEIYTLARESFNGGNSVVQMQAFPFRMTPQNLAVVAKNPNMPFWMDIKEGY
                     DRFELSKTPPSWDVCDKKYVFDLKATDGSPLDPQAACPARGDDPLAASLAAKEAADDS
                     QFKVQVATLDANTAKVTATVQAAADSDAAAKARGNAIGGFFSGLFGGGNAQAATPAPA
                     TGSTVVAPVPYPAPNWG"
     gene            5629..>6171
                     /locus_tag="VHZ56_11490"
     CDS             5629..>6171
                     /locus_tag="VHZ56_11490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX4298634.1"
                     /translation="MNRALGAFVLGLCAVGGLALTGLVWPLASGYLGAANRPQVQHIS
                     GASIDLGPLGQDLAAAGLALGDPAHLRLFKRERRLELWLQHGGARFAPFRSYPICAMS
                     GGLGPKLAEGDRQAPEGFYRVSLRQLNPNSRHHLAFNLGYPNAYDLALGRTGSAIMVH
                     GGCSSVGCFAMTDAGIDEIYG"
BASE COUNT         1046 a         2052 c         2130 g          943 t
ORIGIN      
        1 gtggctgttt ccggcgcatg gcgaggacgg ccatctcagc cggcaggtgt tcggccgcga
       61 cctcaagagc ctggccggac gcgccggtat cggcagcgcg cggattgccc cgcacgtgct
      121 gcggcacgcc ttcgccagcc atctgctgca gggcggggcc gatctgcggg tggtgcagac
      181 gctgctcggc cacgccgata tttccacgac gcagatctac acgcatgtgc tcgacgaaaa
      241 gctgaggacg ctcgtcgaga cccaccatcc gctggccgaa aaggactgag gatgcgctgg
      301 ctcctgcgga tcggcggcgc catcgtgctg gtggccgtcc tggccttttc cggcatcgcg
      361 gcggacatcg cgctctacag ccggcgcagc gatcccggtc cggccgatgc cgccgtggtg
      421 ctcggcgcgg cggtgctggg gcgcgttccc tcgccggtgt tcgccgagcg gctgcgccat
      481 gcggtcgagc tctacaaggc cggcacggtg cgcaagatcg tggtgagcgg cggcctcgcg
      541 ccgggcgatg cgctgagcga ggcggtggcg gggcgcgact ggatggtggc ggagggggtg
      601 ccggcggcgg acgtgctcac cgaggaccag tcgcacacga cgcggcagaa catcgccaat
      661 gtcgcgccgg tgctggcggc caatgggctg caccacgtgc tcatcgtttc cgatccgctg
      721 cacatgcagc gggccatggc gatggccgac ggcgaccaca tggacgcagc gccctcgcca
      781 acgccgacga cgcggttcca gagtttcggc accgaggcgc cgatgctgat gagcgagacg
      841 tggtcgctga tcgcctactg gctgaccggg tcgtagcggc gccagacggc gaggctggtg
      901 cgcgggtcga gcaccacggc cgggtccggg cgcagtcggg cggcggccag caccatatcc
      961 ggcggaccgg cgctgaagca gggcaggccg tcgggcagcg tcaccgccgg gacgcgcgcc
     1021 aggtcgaagc ggatgaaacg ggccaggaac aggtcgaaga cgccggtgcc gccggtgacc
     1081 gcgacgatcc catgcgggat atcgagcgcg ccgagggccg cgtcgaagtc gatccctgcg
     1141 ggattccaca gggtggcgcg tggatcggcc ggatcgggcg cgaggctcgc cacccggcgc
     1201 gtcgcgacca gccgccggcg gcccggattg gcgtgggctt cgtggccaag gcggccgagc
     1261 acgaccagcg cggcggcatc gagcgccgcc tggaaccgct gccagtcggc ctcgctgcgc
     1321 agggcggccg gcatccggtg gtcgcgatcg gcgatgcggc cgtcggcgga gacgatggcg
     1381 tggccgacga tctcgagact caaagtcgac tccattcagg cgccattcag tggccggccc
     1441 gcagaggcgg ggttgacggc gaattcgcgt tcaattgtgc tgcgaattgc cacaaaagct
     1501 ttgttagttc ggttccacaa cactgcgagg gtcgccgtag tgtcccatcc aacgctcaga
     1561 gggaatgcca tcgtgctcac aatttcaaag gtggcgctgg tcgctgccgt gctcagcctt
     1621 gctccggccg ggctgatgcc cgcccttgcc gatgacgcct cttcgtccag ccaggcgccg
     1681 gccgatacct cgacgacgac gggcgggttt tccgtccagc tcagcattcc gaccgtcacc
     1741 gcggtcgatt cgaccatgga cgaggcggcg atccgcgatg cgctgaccgg cggcttcatg
     1801 aagcatgtcg acgatctcgc caagctcaac gccaccacca tcaccattcc cgagatcgac
     1861 ctcaccatga acacggtcga gaacggcacg gcgatgaaca cccaggccgt gtacaaggac
     1921 ctggtgctgt cgagcgtcaa gaacggcgtc gcggcaagcg tcagcatcgg ctcgtcgcag
     1981 agcacgaacc cggaaggcac gttcgtcttc aacggcatgt cgctcaccaa tttcgacatc
     2041 ggcggaacgc tggcgctcta cagcctcgtc aacggcgatg cgacggcggc gatgaagccg
     2101 ctctacaccg cgatggcgtt cagcggcggc accttcagcg gtcccaaggt cagctgcagc
     2161 atcggccagg tggcgaccac cgaggccgac gcgcggccgc tgaaagtgtc gatccaggcg
     2221 atgatggatg cggccaacca ggtcagcgca ggcggcgaca ccccgccgcc ggccgcgttc
     2281 aagaccgtgg tcagcttctt caccgacctg ctgcaggcgt tcaagacctc gccgctgacg
     2341 gtcgggccga tcagctgcaa gggcaccggc gacgacggca agccgggcga gttcgacatc
     2401 ggcggcattt cgatggacgg gctgcagccg ggcctctacc ccgcgatcac cgtcaagggc
     2461 ctgaaattct cggacaccga caccacggtg tcgctcgatg aggccgtcgc caaggcgacc
     2521 gacctcagcc agccgatcgc ggcggtgaac gcggccggcg atgatctcag cccggcgtgg
     2581 ttccaggcca attaccgcaa ggtgatcccg gcctgggcgg gcctgtcgtt cagcggcctc
     2641 tcggtggata cgccgaaccc cgacaccccg agcgaaaagc tcagcgtcaa ggtcgacaag
     2701 ttcgacctgt cgttctccga ctacgtcaac ggcgtgccga gcaagatttc caactccgcc
     2761 tccggcgtcg acgtgccgct ggagcagaac tcgaccgaca gcaacatcca gatgctcgag
     2821 gcgctcggca tcaaccgggt gaccatgggc tacgagttct cggccagctg ggacaaggcg
     2881 aaccaggcga tcaacatcga caagatctcg ttcaacggcc aggacctcgg cggcttcgcc
     2941 gtcgcggcgg tgctgggcaa tgccacggcg gatctgttcg acagcgacgc caacacggag
     3001 tcgaacgcgg cgctcgggct gacggtcaag tcgatcaaga tcgatgccaa cgatgccggc
     3061 atcggcgaca agctgatgcc gatgctggca cagcagcagg gcgccgatgc cgcgacgtac
     3121 cgggcgcagg ccgcggcgac ggcggaagcg gcgaccatcg agatgctggg cagcaccgac
     3181 gccgcccgcc agctcggcgc cgcgctcagc gatttcgtcg ccggcaaggc caagtcgatc
     3241 accgtcaaca tcaccagcaa ggacccggcc ggcgtcgcca tgccggcgct gatggcggcg
     3301 agcgacgatc cctcgacgct gcaggggcag gtggacatca ccggctcggc ccagtagccg
     3361 attgacttgc acgaccccgc tcgccacttt ccggccatga tgcgcggcga catcgctgca
     3421 cattgaggtc cagggcgggc ggggatgcag tcttatctcg attttgaaaa gccggtcgcc
     3481 gatctcgaag gcaagatcgc cgagctgagg tcgctgtcgg gcgacgacaa ggcggtgtcg
     3541 atcgacgagg aggtttcggc gctgacggcg cgggctgacc aggcgctcgc cgacatctac
     3601 aagaggctga cgccctggca gaagacgcaa gtggcgcggc atccgcagcg gccgcatttc
     3661 tccgactaca tcaaggccct gatcagcgag tggacgccgc tcgccggcga ccgcaaatat
     3721 gccgaggatc cggcggtgca ggccggcttc ggccgcttca acggcacgcc gctcgccatc
     3781 atcgggcagg aaaagggctc gaacaccgag acccggctca agcacaattt cggcatggcc
     3841 aagcccgagg gctaccgcaa ggcagtgcgg atcatggaca tggccgaccg tttcagcatc
     3901 ccggtggtgg cgttcatcga caccgccggc gcctatccgg ggatcggcgc cgaggagcgc
     3961 gggcaggccg aggcgatcgc ccgctgcacc gagaaatgcc tcgagctggg ggtgccgaac
     4021 ctcgccatca tcatcggcga gggcggctcc ggcggcgcca ttgccatcgc cacggccaac
     4081 cgggtgctga tgctggaaaa cgccatctac gcggtggctt cgccggaagc gtcggcctcg
     4141 atcctgtgga aggacgcggc gcgggcgatg gatgcggcca acaacatgaa gatcacggca
     4201 caggacctga tgggcttcgg cgtcatcgac ggcatcgtcc ccgagccggc gggcggggcg
     4261 caccgccacg ccgacgcggt gatggcggcg gccggagcgg cgatcagcga tttcctggcg
     4321 cggtttccgg ggacgcgagg ccggctcgag gtgcgcgagc agcgccgcga aaagttcatg
     4381 gcgatcggtt cggcgctgaa ttagcggttt caccgtggcg tgttgcggcg ccgccgctac
     4441 ctctcggtaa ccatcgggcg tataaggaaa gcggtcgtga acttcgggca gattcgcttt
     4501 tgatgctgtt gtccccccgc cggctgatcg ggctcgtggc cgtggtgctg gcgctgtttg
     4561 cgctcgccgg ctgcgccggc atcctgccgc ggtcgagccc gctcaaggcc gaccagaagc
     4621 tcagccagga cgcgatgaac aggctcgccg caatcggctc gacgccgggc gcggcgatga
     4681 tgatccgcat cttcaagcag tccaacgagt tcgaggtctg gaagcagtcg agctcggggc
     4741 agttcaagct gttcaagacc tacgccatct gcgcctggtc gggcgtgctg ggcccgaaag
     4801 tcgtcgaggg cgaccggcag gcgccggaag gtttttacaa catcacaccg gcgcagctga
     4861 atccgaactc caactattat ttgagcttca acaccggctt tcccaacaag ttcgaccgcg
     4921 cctggggccg caccggcgcc aacctgatgg tacatggcga ctgctcgtcg gccggctgct
     4981 attcgatgac cgacgcgtcg gccgaggaaa tctacacgct ggcccgcgag agcttcaacg
     5041 gcggcaacag tgtcgtccag atgcaggcct tcccgttccg gatgacgccg cagaacctcg
     5101 cggtggtggc caagaacccg aacatgccgt tctggatgga tatcaaggaa ggctacgacc
     5161 ggttcgaatt gagcaagacg ccgccgagct gggacgtctg cgacaagaag tacgtgttcg
     5221 acctgaaggc caccgacggc tcgccgctcg atccgcaggc ggcctgcccg gcgcgcggcg
     5281 acgacccgct ggcggcctcg ctcgccgcca aggaagcggc cgacgattcg cagttcaagg
     5341 tgcaggtggc gacgctcgat gccaataccg ccaaggtcac cgcaacggtg caggcggcgg
     5401 ccgattcgga cgccgcggca aaggcgcgtg gcaacgccat cggcggtttc ttctccggcc
     5461 tgttcggcgg cggcaatgcg caggcggcga cgcccgcgcc tgccacgggc tcgacggtcg
     5521 tcgccccggt gccgtatccg gccccgaatt ggggctagat gcggcgcgcc ggcacgcgat
     5581 tttcgcccag attggcgtag aagctccgcc cggcatggat cgatcgtcgt gaatcgcgcg
     5641 ctgggcgcct ttgtcctcgg attgtgcgcc gttggcggac tggcgctgac cggcctcgtc
     5701 tggccgctgg cgagcggcta tcttggtgcc gccaaccgtc cgcaggtgca gcacatttcg
     5761 ggagcttcca tcgatctcgg gccactgggc caggatctcg ctgcggcggg actcgcgctc
     5821 ggcgatccgg cgcatctgcg gctgttcaag cgcgaacgcc ggctggagct ctggctgcag
     5881 catggcgggg cgcggttcgc gccgttccgc agctacccga tctgcgccat gtccggcggc
     5941 ctcggcccga agctggcgga gggcgaccgg caggccccgg agggcttcta ccgggtgagc
     6001 ctgcggcagc tcaatccgaa ttcgcgccac catctggcgt tcaacctcgg ctaccccaat
     6061 gcctacgacc tggcgctcgg ccgcaccggc tcggcgatca tggtgcatgg cggctgctcg
     6121 tcggtcggct gctttgccat gaccgatgcc gggatcgacg agatctacgg c
//
LOCUS       DATAZA010000454         5059 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_875977, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000454 DATAZA010000000
VERSION     DATAZA010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5059
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_875977"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..379
                     /locus_tag="VHZ56_11495"
     CDS             <1..379
                     /locus_tag="VHZ56_11495"
                     /inference="COORDINATES: protein motif:HMM:NF019903.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX4298635.1"
                     /translation="RRHGGNGNITPGSRLRLRRLQIDTQALRVAECVARGRGLKLRDL
                     LRPSRGELDIARARQLAMYLVHVLLSRPQDVVGVLFGRDRTTVAHACRVMEDRRDDPA
                     IEAEIASIEAALDAAGPEVRDAA"
     gene            450..1115
                     /locus_tag="VHZ56_11500"
     CDS             450..1115
                     /locus_tag="VHZ56_11500"
                     /inference="COORDINATES: protein motif:HMM:NF040428.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6456 domain-containing protein"
                     /protein_id="HEX4298636.1"
                     /translation="MLPDGRRAAASDIAALIRSGAIAGDPDGCRANTETVGWLKRARL
                     DAVALAAQHRVTSVVEGIVVNRGESPLGRLATGSAEGPAFLSPHHVEAGERVRRLVER
                     AQLQPRLTMSYSASPTHGTRGAANEISDFAADARKALDQIHRVLPRDCAGVVIDVCGL
                     LKGLQDVERERRWPRRSAKLVLRIGLDQLAQHFGIGPFAVGVASGRPRRWLAEGARPH
                     RFE"
     gene            complement(1118..1534)
                     /locus_tag="VHZ56_11505"
     CDS             complement(1118..1534)
                     /locus_tag="VHZ56_11505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007759405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HEX4298637.1"
                     /translation="MAVPAAFTEIAENLSFLDDWEDRYKYIIELGQALPPLAESEKNA
                     ATRVNGCVSQVWLVSERAGDLLRYRGESDAMIVRGLAAILIALYSGRTPQDIAETDAI
                     AIFDQLGLREHLSTQRSNGLVAMVNRIRSEARAIAA"
     gene            complement(1665..1946)
                     /locus_tag="VHZ56_11510"
     CDS             complement(1665..1946)
                     /locus_tag="VHZ56_11510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298638.1"
                     /translation="MFVLRSAFWLTVGFFLVAPHGVDLGAQVAAMKDQAIAASVQAGQ
                     QFIATQIVAGASKAVAIAATPSTPSVDLPMQVSPTQPFVFPRQRPAAMG"
     gene            2236..4050
                     /locus_tag="VHZ56_11515"
     CDS             2236..4050
                     /locus_tag="VHZ56_11515"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEX4298639.1"
                     /translation="MRNLLASLFGRETGAGPGGAARGRPEALRRKTIAINARLILAVS
                     MIATPAALFGLIKGELMPFVITMIGLAAGFMTMALHRRAQYERAAFGQIYATLTIGLV
                     LTIVDPQIVDFGLAIALLAPVQASLLARTPAKKRAWVLLLAVVLIGCLAALGLVTWPE
                     ASRPEYPLIAGATFLILALLVALTATRLSSAFAVYERGQMNAYRHLVENVQDAVMRFA
                     SDGSVLFTSRSAEKLFGCHRYELSGNGLIDRIHVLDRPTYMKAFSEANHDGRSRTVEV
                     RMRRDDPAEPSRVPQFAWVEVALTPVVDDERQEPRHEVVALLRDVTERHRQESEMREA
                     RRLAEDASNAKSRFLATIGHELRTPLNAIVGFSEMMTSGVVGELSPVHREYADIIHRS
                     GHHLLDVVKMLLDMSRIEAGKFELSAEPFEPQGLIEPCFKMVDGLARERKVRLVTDMP
                     RLLPTVTADERACRQILINLLSNAIKFSQEGGVVTVALKRQGVLLNMSVTDRGIGMDS
                     DAVSRIGEAFFQVQDGLARQYEGTGLGLSIVKGLVDLHGGALRATSALGEGTTITVLL
                     PLNGPATKTAQTHAVTPLTREPGVAPVPTWQDEKRRAL"
     gene            4047..>5059
                     /locus_tag="VHZ56_11520"
     CDS             4047..>5059
                     /locus_tag="VHZ56_11520"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HEX4298640.1"
                     /translation="MTVEAYSSLPLQAGSALAATAARTARWAISVYMRQPLRNTAVAA
                     LVGLSAMAGANALYKQAHHHPAPLFGSFEDQPAAKSSSVAPVTPLVRPRQLDAVNTDE
                     TTGSVDADAPTPAVKPIDGADIMAAQKKLIALNFLNGNADGLFGAHTIRAIKAFEQKA
                     GLPARGQLTPALLAMLVSTPVPAGDAPALLPAPRLAPAQPATNGADTLPPPPLAAAAT
                     DLVKPLPAPAPLTSTSTLSSVEPPPVATPLAAVAAATGTELIPPSSTQTLAMNEPALV
                     ARRPVQTIAVHVSTPAIAADAQPIPSPLAPATEGTDDASTNPGVVAEVQRGLSSLGFL
                     HGEA"
BASE COUNT          843 a         1737 c         1659 g          820 t
ORIGIN      
        1 gcgcaggcat ggagggaacg gaaatatcac gcccggaagc cgcttgcggc tccggcgatt
       61 gcagatcgac acgcaggcgc tgcgagtcgc ggagtgcgtg gcgcgggggc gtggtctcaa
      121 gctacgggat ttgctgcgcc cctcgcgcgg tgaactcgac atcgcgcggg cccgccaact
      181 cgcaatgtat ctcgtccacg tcttgctgag tcggccgcag gacgtggtgg gcgtcctttt
      241 cgggcgagac cggaccaccg tcgcccacgc ctgccgggtc atggaggatc gccgcgacga
      301 tcccgcgatc gaggccgaga tcgccagtat cgaagccgct ctcgacgcag ccggcccgga
      361 ggtacgcgat gcggcctgag acccccttgt tccgcttcgt ccgaggcctt gccggcggcc
      421 atcacgccgg ccgtctgggc gagttctaca tgctgcccga cggccgtcgc gccgctgcgt
      481 ccgacattgc tgcattgatc cgctccggcg ccatcgccgg cgacccggac ggatgccggg
      541 cgaacaccga aaccgtcggc tggctgaagc gcgcccggct cgacgcagtt gcgctggcgg
      601 cccagcaccg ggtgacgtct gtcgtcgagg gcatcgtcgt caaccggggc gaaagtccgc
      661 tcgggcggct cgcaaccggg agcgccgagg ggccggcttt tctgtctccg caccacgttg
      721 aggcgggcga gcgcgtgcgc cggctcgtcg agcgcgccca gttgcagccg cgtctgacca
      781 tgtcctactc ggcatccccg acccacggaa cacgaggcgc ggcgaacgag atttcagact
      841 ttgccgccga cgcccgcaag gcgctcgacc agatccaccg ggtcttgccg cgcgactgtg
      901 ccggtgtggt gatcgacgtc tgcggccttc tgaagggctt gcaggatgtc gagcgcgagc
      961 ggcgctggcc gcggcgcagc gccaagctgg tgctgcgcat cggtctcgac cagttggcgc
     1021 agcacttcgg catcggtccg ttcgccgtcg gggtggcgag cggccggccg cgacgctggc
     1081 tggcggaggg ggcccgcccg caccgcttcg agtgatctca cgcggcgatg gcgcgcgctt
     1141 cggagcggat gcggttgacc atggcgacga gcccgttcga gcgctgcgtc gaaaggtgct
     1201 cgcgcaggcc cagctgatcg aagatcgcga tcgcgtcggt ttcggcaatg tcttgcggcg
     1261 tacggccgga gtagagcgcg attaggatcg cggcgagccc acgcacgatc atcgcatccg
     1321 actcaccgcg atagcgcaac aaatccccgg cgcgctcgct gaccagccag acctgcgaca
     1381 cgcagccatt gaccctggtg gcagcgttct tttcagactc cgccagcggc ggcagcgcct
     1441 ggccgagctc gatgatatac ttgtaccgat cctcccaatc gtcgaggaac gagaggtttt
     1501 cggcgatctc ggtgaacgcg gcgggcacgg ccatcagcga tatctaggac aagccaggtc
     1561 ccgtcgccag agcgcaaaaa aaccgcagac gcggggcagc gcgtctgcgg ctcgaagtca
     1621 gggatcgctg gagtagcgtc gggggagtga cgcgatccct ggccttaacc catcgcggcc
     1681 ggtcgttgtc gggggaacac gaacggctgt gtcggcgaaa cctgcatggg gaggtcgaca
     1741 gatggggtag agggggttgc cgcgattgcc acggccttgc tcgcgccagc gacgatctgg
     1801 gtggcgatga actgctggcc ggcctgcacg ctggccgcga ttgcctgatc cttcatcgcg
     1861 gcgacctgag cgccgagatc gacgccatgc ggcgcgacaa ggaagaaacc aacggtaagc
     1921 cagaaggcag agcggagcac gaacatgaga ccctcgaacg aaacggaatt gcgcggcgtt
     1981 cgagacagac gataggcccc cccgattaaa gcacgctgcg ccaattcgat aaaattgcat
     2041 cgatcgcatc cgggcaaatc ctgagggccc gtgcggtggt caatgcattg tttacgctgt
     2101 gcggagaaag cgacctgtcg gcgccgcggg agggcctgcc gaaggccacc agcggcgctg
     2161 acttaagggt gtcttagcgg ttcgatggaa gggtgagtcc agtaaaactg gcgtcctccg
     2221 gaagcggttc ttgtaatgcg taacctgctc gcctctctgt tcggcaggga gaccggcgct
     2281 ggcccgggtg gcgcggcgcg cggccggccc gaggcgcttc ggcgcaagac catcgcgatc
     2341 aatgcccggc tcattctcgc ggtcagcatg attgcgactc ccgcagcgct gttcggcctg
     2401 atcaagggcg aattgatgcc cttcgtcatc accatgatcg gcctcgccgc cggtttcatg
     2461 acgatggcac tgcaccgccg cgcccagtac gagcgcgccg ccttcggaca gatctacgct
     2521 accctcacca ttggactcgt gctcaccatc gtcgatccgc agatcgtcga tttcggtctg
     2581 gccatcgcgc tcctggcccc ggtgcaggca tcgctcctgg cacgtacgcc ggctaaaaag
     2641 cgcgcctggg tgctgctcct ggccgtggtc ctgatcggct gtcttgccgc cctcgggctg
     2701 gtcacctggc ccgaggccag ccgccccgaa tatccgctca tcgccggggc caccttcctg
     2761 atcctggccc tcctcgtcgc gctcacggcc acccggctga gttcggcctt tgcggtctac
     2821 gagcgcggcc agatgaacgc ctatcggcat ctggtcgaga acgtccagga cgcagtcatg
     2881 cgtttcgcca gcgacggcag cgtgctcttc acgtcaagat ctgccgagaa gctgttcggc
     2941 tgccaccgct atgagctttc cggcaacggt ctcatcgacc gcatccacgt gctcgaccga
     3001 ccgacctata tgaaggcctt ctccgaggcc aaccacgacg gccggtcccg caccgtcgag
     3061 gttcgcatgc gccgcgacga tccggccgag ccgtcgcgcg tccctcagtt cgcctgggtc
     3121 gaagtggcgc tgacaccggt cgtcgacgac gagcgccaag agccgcgcca cgaggtggtg
     3181 gcgttgctgc gcgacgtcac cgaacggcat cgccaggaga gcgagatgcg cgaggcccgc
     3241 cggctcgcgg aggacgcctc caacgccaag tcgcggttcc tcgcgaccat cggtcacgag
     3301 ctgcgcacgc cactaaacgc catcgtcggg ttttcggaga tgatgacgag cggtgtcgtc
     3361 ggcgagctgt ccccggtgca tcgggaatat gccgacatca ttcatcgcag cggtcatcac
     3421 ctgctcgacg tggtcaagat gctgctcgac atgagccgga tcgaagccgg caaattcgag
     3481 ctcagcgccg agccgttcga gccgcagggg ttgatcgagc cctgcttcaa gatggtcgac
     3541 gggctggcgc gcgagcggaa agtccggctg gtaaccgaca tgccgcggct gctgccgacg
     3601 gtaaccgctg acgaacgggc gtgccggcag atcctgatca accttctctc caatgccatc
     3661 aagttcagcc aggagggcgg cgtcgtgacc gttgcgctca agcgccaggg cgtgctgctg
     3721 aacatgtcgg tgaccgaccg cggcatcggc atggacagtg acgcagtgag ccggatcggc
     3781 gaggcgttct ttcaggtcca ggacggactc gcccgccagt atgaggggac cggcctcggg
     3841 ctttccatcg tcaagggtct cgtcgatctg cacggcggcg cgctgcgcgc aacctcggcg
     3901 ctgggcgagg ggacgacgat cacggtcctc ttgcccttaa acggtccagc aaccaaaaca
     3961 gctcaaactc acgcggtgac ccctctcacc cgtgagccgg gcgtcgcacc ggtgcccacg
     4021 tggcaagacg aaaaaagacg agcgctatga ccgtagaagc ctattcgagc ctgcctctcc
     4081 aggccggcag cgcgctggcg gcaaccgccg cgcggaccgc gcgctgggcg atttccgtct
     4141 atatgcggca gccgctgcgc aacactgcgg tcgcggcgct ggtcggcctg tcggcgatgg
     4201 ccggcgccaa cgcgctttac aagcaggcgc accaccaccc agctccgctt ttcggcagct
     4261 tcgaagacca gccggcggca aagtcgtcct cggttgcccc cgtgacgccc ctcgtccggc
     4321 cccggcagct cgacgccgtc aacaccgacg agacgaccgg cagtgttgat gccgacgcgc
     4381 ccactcccgc cgtcaagccg atcgacggcg ccgatatcat ggcggcacaa aagaagctga
     4441 ttgccctcaa tttcctcaat ggcaacgccg acggtctttt cggcgcgcac accattcgcg
     4501 ccatcaaggc gttcgagcag aaggcaggac ttccagcccg gggccaactc accccggcgt
     4561 tgctggccat gcttgtctca acaccggttc cggccggcga tgcgcccgcc ctgttgcccg
     4621 cgccgcgcct cgcgcctgcg cagcccgcga cgaacggcgc cgacaccttg ccgccgccac
     4681 cgcttgccgc tgcggccacg gacctggtca agcccctgcc ggcgccggct ccgctcacca
     4741 gcacatcgac gctttcgagc gtagaaccgc caccggtcgc gacgccgctg gccgctgttg
     4801 ccgccgcgac cggcaccgag ctaattccac cgtcatcgac gcagacactg gcgatgaacg
     4861 agccggccct ggtggccagg cggccggtgc agacgatcgc cgtccacgtt tcgacgccag
     4921 ccattgctgc cgatgcccag ccgatcccct cgccgctcgc tcccgcgacc gaggggacag
     4981 acgacgcctc gaccaacccg ggcgtggtgg ctgaggtgca gcgtggcctc tcgagcctcg
     5041 gcttcctcca tggcgaggc
//
LOCUS       DATAZA010000455         4278 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_993273, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000455 DATAZA010000000
VERSION     DATAZA010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4278
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_993273"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..179)
                     /locus_tag="VHZ56_11525"
     CDS             complement(<1..179)
                     /locus_tag="VHZ56_11525"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186609.1"
                     /note="catalyzes the formation of 3-phosphonooxypyruvate
                     and glutamate from O-phospho-L-serine and 2-oxoglutarate;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine aminotransferase"
                     /protein_id="HEX4298641.1"
                     /translation="MLTAPAVKPANPNFSSGPCAKRPGWTTDVLKSALVGRSHRAKPA
                     KARIEKAIALTRELL"
     gene            402..1079
                     /locus_tag="VHZ56_11530"
     CDS             402..1079
                     /locus_tag="VHZ56_11530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008533573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX4298642.1"
                     /translation="MKILVAEDDPQSSEFIRKGLTQEGHQVECLVDGRDVLAACLYNP
                     YDMLILDRMMPGMDGMTVLRTLRAADRQLPVLFLTAMGDVDDRVDGLLAGGDDYLVKP
                     FHFSELVARVTSLARRPQQNAATTRLVVHDLELDLLAHTAKRAGTSIDLQAKEFALLE
                     ILMRNAGRIVTKTMLLERVWDFNFDPKTTVVETHMSRLRSKIDKPFDVALIHTTRNSG
                     YSMHAPR"
     gene            1066..2499
                     /locus_tag="VHZ56_11535"
     CDS             1066..2499
                     /locus_tag="VHZ56_11535"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX4298643.1"
                     /translation="MPRVSILSGSAFRSAMLVLVVFALVLAVAGWAILDATRSALLEQ
                     TKSYILEDVDLLHDANTTGGERELIRFIENAVATRSDKQFGFGLFETGGRRIAGNVAK
                     LPAFRDWGDLDRQPDQADDDPAFLAYSEKLGNRIIVVARSQRTGSAIIDSILNALIFS
                     GIVICASAVLIGYILSRNVSSKLQVIDQTLDEVSRGNTEIRLPVGRSNDQIDHVSRQI
                     NAHLDRLSEFMGNMRNTIVAIAHDLKSPLNRAYILLQDASRARDPSEASSLLEDASNE
                     MDSLGQIMDTVLRISRIEATDDSSTFDSFSASVLVKDLAQTFEPVLEAVGQTLRCTMT
                     PDDVPLFGDRRMVQQMLVNLIENASRYGGATATIDLMVETRSKAPVLIVADNGKGIPA
                     DKYDDVLQPFFRIASDRTAPGAGLGLALVKAVAVRHRARLELGDNHPGLKVAISFPPA
                     PAVPHRRELAPRKAPAGRSFEGTPLQH"
     gene            2612..2893
                     /locus_tag="VHZ56_11540"
     CDS             2612..2893
                     /locus_tag="VHZ56_11540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298644.1"
                     /translation="MRRSLIPLALVVSLAASSAMAATSSTAVGVVKALDAKACTVTLG
                     TTVFHFAAKCDLSKIKVGEKVEIWFRVVNKVDDATKIAAATAATTTPKK"
     gene            3023..>4278
                     /locus_tag="VHZ56_11545"
     CDS             3023..>4278
                     /locus_tag="VHZ56_11545"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018096576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HEX4298645.1"
                     /translation="MLAEIDYLHRLNPEQRRAVEHGVGTGAPGPLLVIAGAGSGKTNT
                     LAHRVAHLIVNGADPHRVLLLTFSRRAAGEMSRRVARIAAEVMGVSSGAVADTLHWAG
                     TFHGIGARLLRDYAQNLGLDPQFTIHDREDSADLLNIVRHDLGLHESKARFPAKGTCL
                     AIYSRTVNAGADLTETLKESFPWAAMWEVELRGLFAQYVAAKQEQNVLDYDDLLLYWA
                     AMMREPAVAADLGARFDHILVDEYQDTNRLQSTILLALRPDGRGLTVVGDDAQAIYSF
                     RAATVRNILDFPGSFSPPADIVTLSRNYRSTAPILAAANAVIAQAAERFTKDLWTERQ
                     SAAKPRLVTVRDEAAQAGYVVERVLESREAGVPLKEQAVLFRTSSHSGPLEIELTRRN
                     IPFVKYGGLKFLDAAHVKDMLALLRWA"
BASE COUNT          725 a         1570 c         1274 g          709 t
ORIGIN      
        1 tcgagcaact cgcgggtcag cgcgatggct ttctcgatcc gcgccttggc cggcttggcg
       61 cgatgcgagc ggccgaccag cgcggatttg agcacgtccg tcgtccagcc tggacgcttg
      121 gcgcagggac ccgatgaaaa atttggattg gccggtttaa ccgccggtgc ggtgagcatg
      181 tctgccatgg cgaccctccc aggtcgaaag ccttgcgtta gggcaaggtg tcctgacgcc
      241 gccaataccc caaaccgctc gccgcatcaa gtgccgccat ccgggcccct cggggtcgcc
      301 gtgccttgcc gcaatcgcgc catgctggtg gccgattgag gcggcgcggc ttgacgcgcc
      361 ggtaccgggg cgccaactag cccaaacgcc ggggggttcg cgtgaagatt ctggtggccg
      421 aagacgatcc gcaatcgtcc gagttcatcc gcaagggcct gacccaggaa ggccaccagg
      481 tcgaatgcct ggtcgatggc cgcgacgtcc tcgccgcctg cctctacaac ccgtacgaca
      541 tgctgatcct cgaccgcatg atgccgggga tggacggcat gaccgtgctc cgcaccctgc
      601 gcgccgccga tcggcaactg cccgtgctgt tcctcaccgc catgggcgac gtcgacgatc
      661 gcgtcgacgg cctgctggcc ggcggcgacg attacctggt gaagccgttc catttctccg
      721 agctcgtcgc ccgcgtcacc tcgctggcgc gacgcccgca gcagaacgcc gcgaccacgc
      781 ggctggtcgt ccacgacctc gagctcgacc tgctcgccca caccgccaag cgggcgggca
      841 ccagcatcga cctccaggcc aaggaattcg cgctgctcga gatcctgatg cgcaacgccg
      901 gccgcatcgt caccaagacg atgctcctgg aacgtgtctg ggatttcaat ttcgacccca
      961 agaccacagt cgtcgaaacc cacatgagcc gcctgcgctc gaagatcgac aagcccttcg
     1021 acgtcgccct catccacacc acgcgcaaca gcgggtactc gatgcatgcc ccgcgttagc
     1081 atcctttctg gatcggcgtt ccgctcggcg atgctcgtgc tggtggtctt tgcactggtg
     1141 ctggccgtcg ccggctgggc catcctcgat gccacccgtt ctgccctgct cgagcagacc
     1201 aaatcgtaca ttctcgagga cgtcgacctg ctgcacgacg ccaacacgac cggcggcgag
     1261 cgcgagctga tccgcttcat cgaaaacgcc gtggcgaccc gctcggacaa gcagttcggc
     1321 ttcggcctgt tcgagaccgg cggccgccgc attgccggca atgtcgccaa gctgccggcg
     1381 tttcgggact ggggcgacct cgaccgccag cccgaccagg cggacgacga ccctgccttc
     1441 ctcgcctaca gcgaaaaact cggcaaccgc atcatcgtcg tcgcccgctc gcagcgcacc
     1501 ggctcggcca tcatcgattc catcctcaac gcgctgatct tctccggcat cgtcatttgc
     1561 gccagcgccg tcctcatcgg ctacatcctc tcccgcaacg tgtcgtcaaa actccaggtc
     1621 atcgaccaga ccctcgacga ggtgtcccgc ggcaacaccg agattcgcct gccggtcggc
     1681 cgctccaacg accagatcga ccacgtgtcg cgacagatca acgcccacct cgaccggctg
     1741 agcgaattca tgggcaacat gcgcaacacc atcgtcgcca tcgcccacga cctgaagtcg
     1801 ccgctcaacc gcgcctacat cctgctgcag gatgcctccc gggcccgcga cccgtcggag
     1861 gcttcctcgc tgctcgagga tgcctccaac gagatggact cgctcggcca gatcatggac
     1921 acggtgctgc gcatctcgcg catcgaagcg accgacgaca gttcgacctt cgacagcttt
     1981 tccgccagcg tcctggtcaa ggacctggcg cagaccttcg agccggtgct cgaagcggtg
     2041 gggcagaccc tgcgctgcac gatgactccg gacgacgtgc cacttttcgg cgatcgccgc
     2101 atggtgcagc agatgctggt caatctgatc gaaaacgcca gccgctacgg cggcgccacg
     2161 gccaccatcg acctcatggt cgagacgcgc agcaaggcgc ccgtgctgat cgttgccgac
     2221 aatggcaagg gcatccccgc cgacaaatat gacgacgtgc tgcagccctt cttccgcatc
     2281 gcctcggacc gtaccgcccc cggcgcgggc ctcggccttg ccctggtcaa ggcggtcgcg
     2341 gtgcgtcacc gcgcgcggct cgagctgggg gacaaccacc cgggcctcaa ggtcgccatc
     2401 agctttccgc cggcgccggc cgtgccgcat cgccgcgagc tcgcgccccg caaggcgccg
     2461 gccggtcgca gcttcgaagg aacgccgctc caacattaac ccgatgtata attggcgcga
     2521 gcatcaggca aagccatcgc tccactgagt gtgtcgtcga gtcttcgacc gacggccgga
     2581 ccggccgtcc acacatcaca tggagatctt cgtgcgccgt tcgctcattc ccctcgccct
     2641 cgttgtctcg ctggccgcat cgtcggccat ggccgcgacc agctcgaccg ccgtcggcgt
     2701 cgtcaaggcg ctcgacgcca aggcctgcac cgtgacgctg ggcaccaccg tgttccactt
     2761 cgccgccaag tgcgacctgt ccaagatcaa ggtcggcgag aaggtcgaaa tctggttccg
     2821 cgtcgtcaac aaggtcgacg acgccaccaa gatcgccgca gccaccgccg caacgacgac
     2881 gcccaagaaa tagtcgggcc tgggggcgcg gccgagatcg ccgcgcccgt cctctgtccg
     2941 gcacccgtgt cgacttagga gattgcgaac aaaacgggaa taatgctgat tgagggctac
     3001 ccctccagct gctgattcgt ccgtgctcgc cgagatcgac tacctccatc gcctcaatcc
     3061 cgagcagcgc cgcgccgtcg agcacggcgt cggcaccggt gcacccgggc cgctgctggt
     3121 gattgccggc gccgggtcgg gcaagaccaa cacgctcgcc caccgggtcg cccatctcat
     3181 cgtcaacggc gccgatccgc accgcgtcct gctgctgacc ttctcgcgcc gcgccgcagg
     3241 cgagatgtcc cgtcgtgtcg cccgcatcgc cgccgaggtg atgggcgttt cttctggcgc
     3301 cgtcgccgat acgctgcact gggccggcac cttccacggc atcggcgctc gcctgttgcg
     3361 cgactacgcc cagaacctcg ggctcgaccc gcaattcacc atccatgatc gcgaagactc
     3421 ggcggacctg ctcaacatcg tccgccacga cctcggcctg catgagagca aggcgcggtt
     3481 cccggccaag ggcacctgcc tggcaatcta ctcgcgcacc gtcaatgccg gcgccgacct
     3541 caccgaaacg ctgaaggaaa gcttcccctg ggcggctatg tgggaggtcg agctgcgcgg
     3601 tttgttcgcc cagtacgttg ccgccaagca ggaacagaac gtcctcgatt acgacgacct
     3661 gctgctttac tgggcggcga tgatgcgcga gccggcggtg gcggccgacc tcggcgcccg
     3721 cttcgaccac atcctcgtcg acgaatacca ggacaccaac cggctgcagt cgacgatcct
     3781 cctggcgctc cgccccgatg gccggggcct gaccgtggtt ggcgacgacg cgcaggcgat
     3841 ctactccttc cgcgccgcca ccgtccgtaa catcctcgac ttccccggca gtttctcgcc
     3901 gcctgcggac atcgtcacgc tgtcgcgaaa ttatcgctcg actgccccga tcctcgccgc
     3961 cgccaacgcg gtgatcgccc aggccgcaga gcgcttcacc aaggatttgt ggaccgagcg
     4021 gcagtccgcg gcgaagcccc ggctggtcac cgtgcgcgac gaagcggcgc aggccggcta
     4081 cgtcgtcgag cgcgtgctcg aaagccgcga agccggtgtg ccgctcaagg agcaggcggt
     4141 gctgttccgg acctcatcgc attcgggacc gctcgagatc gagctcaccc gccgcaacat
     4201 cccgttcgtg aagtatggcg gcctcaaatt cctcgacgcc gcccacgtca aggacatgct
     4261 ggcgctgttg cgctgggc
//
LOCUS       DATAZA010000456         3783 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_760390, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000456 DATAZA010000000
VERSION     DATAZA010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3783
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_760390"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            35..508
                     /gene="ybeY"
                     /locus_tag="VHZ56_11550"
     CDS             35..508
                     /gene="ybeY"
                     /locus_tag="VHZ56_11550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEX4298646.1"
                     /translation="MPAPLSIEISRHSDGWPENLDARADAAVRAALAQSKAKIAGAAE
                     LSIVLTDDAEQRVLNRDWRGIDKSTNVLSFPQIEPFAPVSGLLGDIILARETLLREAG
                     EEGVSVDDHFTHLVVHGFLHLLGYDHMDDDEALAMEGLETQILASLGVADPYSGD"
     gene            524..1552
                     /locus_tag="VHZ56_11555"
     CDS             524..1552
                     /locus_tag="VHZ56_11555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007010173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEX4298647.1"
                     /translation="MSDSTTAPPKTAAADRPKAEPPSPTAPAAARGLPLLARLKALFA
                     RPSLRDDLEDALESEAAGETQDFSESERTILQNVLQLGDKHVEDVMVPRADIEAIDVD
                     CTLGDMIARFRAVGHSRIPVYADSIDNITGFIHVKDALRRVTEKVTDPEKPAPVRFVS
                     TALRHKLGKLDIIRTVLFVPPLMPVGDLLQQMQLKRVHMAIVIDEYGGTDGLVTIEDL
                     LEAVVGEIEDEHDTEDGPLVRKINSNIFIASARAELGEVEEVIGSDFDPGEHGDDVDT
                     IGGLVFALAGRVPVKGEIVGGIRNFEFEVLQADPHQLRRIKIKRLKQRKAPVKAGGDA
                     GTESKAAE"
     gene            1625..3241
                     /gene="lnt"
                     /locus_tag="VHZ56_11560"
     CDS             1625..3241
                     /gene="lnt"
                     /locus_tag="VHZ56_11560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006497 - protein lipidation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEX4298648.1"
                     /translation="MTRLAEWTMLSHGWRRFLLLVVAGAVAALSIPPLFFLPALFVAF
                     PFWVWALDGAERRTGLGRLFGPAFSIGFAFGWGYFTVAFHWLAAAFLLEGGLYLIPMP
                     FAILALAALIALFWGLASALAHLCWSHGAWRIVTLAAFLAAAEYARGTVFSGFPFDLL
                     GYALTANTEMMQLASVVGVYGLTALAALLAMAPALIWPADGRALAPRLVPFVLAVAVI
                     AAMVAYGHVRLASTAVTPRTDMRVRMVQPMITEHSDWAAANPPDIVSRLIDLSSGKTG
                     PNDPGLADKTQLVWPESVFPFFMSQYPEGLARIGRMLPATTTLLTGAPREPEGDPADG
                     DADNPGYNSLLAINHDGEIIGSYDKSHLVPFGEYLPFAGFWKLFGIRQFVPGTNGWAP
                     GDGKRLMTVEGTPAFIALICYEAIFSGDLGADPAQAQFLLNISNDEWFDGSIGPAQHA
                     HHALLRAVETGLPLLRATNSGVTFAADPLGRITAQLAPGEPAVLDVVPANKIGATPFD
                     HWGNWPFFLVVLLGIGSALVTRTRPPRRTG"
     gene            3389..>3783
                     /locus_tag="VHZ56_11565"
     CDS             3389..>3783
                     /locus_tag="VHZ56_11565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003503733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine synthetase N-terminal
                     domain-containing protein"
                     /protein_id="HEX4298649.1"
                     /translation="MRSSYLFTSESVSEGHPDKVCDRISDEIVDLVFREAKKTGMDPS
                     QVRIACETLATTNRVVIAGEVRVPSSLLKKDKAGNVLHDATGAPIVNPAKFKSTARKA
                     IKAIGYEQAGFHWKTARIDVLLHGQSADIA"
BASE COUNT          573 a         1401 c         1178 g          631 t
ORIGIN      
        1 atggctccgg tgggttgcgc gagcccctga cgagatgccc gctcccctca gcatcgagat
       61 ttcccgccac agcgacggct ggcccgaaaa tctcgacgcc cgcgccgatg ccgcggtgcg
      121 cgccgcgctg gcccagtcga aagcgaagat cgccggcgcc gccgagctct cgatcgtcct
      181 caccgacgac gccgagcagc gcgtcctcaa ccgcgactgg cgcggcatcg acaagtcgac
      241 aaacgtgctg agcttccccc agatcgagcc ttttgctccg gtttccgggc tcctgggcga
      301 tatcatcctc gcccgcgaga cgctgctccg tgaggccggc gaagagggcg tcagcgtcga
      361 cgaccatttc acccatctgg tggtgcatgg ctttctgcac ctgctgggct atgatcacat
      421 ggacgacgac gaggcccttg ccatggaagg gctcgagacc cagattctgg cctccctcgg
      481 cgtggcggac ccctattccg gcgattgaaa cgaacgattt gcgatgagcg atagcaccac
      541 agccccgccc aagactgcgg cagcggatcg gcccaaggcc gagcctccgt cgcccaccgc
      601 ccccgccgcc gcgcgggggc tgccgctgct ggcccggctc aaggcgctgt tcgcgcgccc
      661 ctcgctgcgc gacgacctcg aggacgccct cgaatccgag gcggccggcg aaacccagga
      721 tttctcggag tccgagcgca ccatcctgca gaacgtcctg cagctcggcg acaagcatgt
      781 cgaggacgtc atggtgccgc gcgccgacat cgaggccatc gacgtcgact gcacgctcgg
      841 cgacatgatc gcccgcttcc gcgccgtcgg ccattcgcgc atcccggtct atgcggactc
      901 gatcgacaac atcaccggct tcatccacgt caaggacgcg ctgcgccggg tcaccgagaa
      961 ggtcaccgac cccgaaaagc ccgcgccggt gcggttcgtg tcgacggccc tgcgccacaa
     1021 gctgggcaag ctcgacatca tccgcaccgt gctgttcgtg ccgccgctga tgccggtggg
     1081 cgacctgctg cagcagatgc agctgaagcg cgtccacatg gccatcgtca tcgacgaata
     1141 cggcggcacc gacggcctcg tcaccatcga ggacctgctc gaagccgtgg tcggcgagat
     1201 cgaggacgag cacgacaccg aggacggtcc gctggtccgc aagatcaact ccaacatctt
     1261 catcgcctcc gcccgcgccg agctcggcga ggttgaggag gtcatcggct ccgatttcga
     1321 tcccggcgag cacggcgacg acgtcgacac catcggcggg ctggtgttcg cgctcgccgg
     1381 ccgcgtgccg gtcaagggcg agatcgtcgg cggcatccgc aacttcgagt tcgaggtgct
     1441 gcaggccgat ccgcaccagc tgcgccgcat caagatcaag cggctgaagc agcgcaaggc
     1501 gccggtgaag gccggtggcg acgccgggac ggaaagcaag gcggcagagt agtcgccggg
     1561 gtgagccccg gccttgccca tgctagaccg gccccgtgcc gccccacctg cctgattcgc
     1621 ctgcatgacg cgcctcgccg aatggaccat gctctcgcat ggctggcggc gtttcctgct
     1681 gctggtcgtc gccggggcgg tggcggcgct gtccattccg ccgctgttct tcctgccggc
     1741 gctgttcgtc gccttcccgt tctgggtctg ggccctcgat ggcgccgagc gccgaaccgg
     1801 tctcggccgg ctcttcggac cggcattttc catcggcttt gccttcggct ggggctattt
     1861 caccgtcgcc ttccactggc tggcggcggc gttcctgctc gagggcgggc tctacctcat
     1921 cccgatgccg ttcgcgatcc tggcgctcgc ggcgctgatc gcgctgttct ggggcctcgc
     1981 ctcggcgctt gcgcacctgt gctggagcca cggcgcctgg cgcatcgtca ccctcgcggc
     2041 cttcctcgcc gccgccgaat acgcccgcgg caccgtgttt tccggcttcc cgttcgacct
     2101 gctgggctac gcgctcaccg ccaacaccga gatgatgcag ctcgcctcgg tcgtcggggt
     2161 ctatggcctc acggcgctgg cggcgctcct tgccatggcc ccggcgctga tctggccggc
     2221 cgacggccgg gccctggcgc cgcggctcgt gcccttcgtc ctcgccgtcg cagtcatcgc
     2281 cgccatggtc gcctacggcc acgtccgcct cgcctcgacc gcggtgacgc cgcgcaccga
     2341 catgcgggtc cgcatggtgc agccgatgat caccgagcac tccgactggg ccgccgccaa
     2401 cccgcccgac atcgtcagcc ggctgatcga cctgtcgtcg ggcaagaccg gccccaacga
     2461 tccgggcctc gccgacaaga cccagctggt gtggccggaa tcggtgttcc cgttcttcat
     2521 gagccagtat cccgagggcc tggcgcgcat cggccgcatg ctgccggcga ccaccacgct
     2581 gctcaccggc gcgccgcgcg agcccgaagg cgatcccgcc gacggcgatg ccgacaatcc
     2641 cggctacaac tcgctcctcg ccatcaacca cgatggcgaa atcatcggca gctacgacaa
     2701 atcgcacctc gtgcccttcg gcgagtacct gcccttcgcc ggcttctgga agctgttcgg
     2761 catccgccag ttcgtgcccg gcaccaatgg ctgggccccc ggcgacggca agcggctgat
     2821 gacggtggag ggcacccccg ccttcatcgc gctgatctgc tacgaggcca tattttccgg
     2881 cgatctcggc gccgatccgg cgcaggcgca gttcttgctc aatatctcca acgacgaatg
     2941 gttcgacggc tcgatcggtc cggcccagca cgcccatcac gccctgctgc gcgccgtcga
     3001 gaccgggctg ccgctgctgc gcgccaccaa ttccggcgtc accttcgccg ccgacccgct
     3061 cggccgcatc accgcgcagc tggcccccgg cgagccggcg gtcctcgacg tggttccggc
     3121 caacaagatc ggcgcgacgc cgttcgacca ctggggcaac tggccgttct ttctcgtcgt
     3181 gctgctgggg atcggcagcg cgctcgtcac ccgcacccgg ccgccgcgcc gcaccggctg
     3241 aagcgtgggc atggatttcc ggcaacggcc gccgcggcat atcaagcttt ctttatatcc
     3301 gccttgaccc gcacccccgt cggtgacaga accacgcccg aactacgcga attctcgcgt
     3361 ttttgggcaa tttttcgggg tttcggccgt gcggtcctcc tatctgttca cctctgaatc
     3421 ggtttccgaa ggtcatccgg acaaggtctg cgaccgcatc tccgacgaga tcgtcgacct
     3481 ggttttccgc gaagccaaga agaccggcat ggaccccagc caggtccgca tcgcctgcga
     3541 gacattggcc accaccaacc gtgtggtcat cgccggcgaa gtgcgcgtgc cctcgagcct
     3601 gctgaagaag gacaaggccg gcaacgtgct gcacgacgcc accggcgcgc cgatcgtcaa
     3661 tccggcgaag ttcaagtcga ccgcccgcaa ggccatcaag gccatcggct acgagcaggc
     3721 gggcttccac tggaagaccg cgcgcatcga cgtgctgctg cacggccagt cggccgacat
     3781 cgc
//
LOCUS       DATAZA010000457         3773 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2502060, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000457 DATAZA010000000
VERSION     DATAZA010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3773
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2502060"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..828
                     /locus_tag="VHZ56_11570"
     CDS             <1..828
                     /locus_tag="VHZ56_11570"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX4298650.1"
                     /translation="AVLKKFNTEVDYVTVNDFTQDAVNAAGRATLLQGYDAIAFLPLD
                     NGACPLIKDAVKANVKVAVFITTADCAKDAGALFFHGEDLDQAWGPVAVGAAVKAVNA
                     DPMWAGKPCKAGVITGAFSVPTHETMRKAILAGLAGTNISPVSDGVEVEQDLSKVGPA
                     VKAYITGDPDDLCAIFVDIGDAGAAAAALTDDQAKHIKIVSADFTQGGVEQMRKGKQA
                     ILIGQDPFGEAYDTAILLYNAIVTGTAPDFHEPVKNSIMTPDNIDALMKAQADGTAP"
     gene            853..2364
                     /locus_tag="VHZ56_11575"
     CDS             853..2364
                     /locus_tag="VHZ56_11575"
                     /EC_number="7.5.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HEX4298651.1"
                     /translation="MIEGRGLTKRFGGVVALDAVDISVAPGRITALLGENGAGKSTLV
                     ACLSGAYRADQGEVLVDGTTQRFRSPDDARRAGISVIHQEPQMLEQQSVAANIYLPRL
                     APRPLRPTPLREMNRRAGQHLLALGIRDLDPQARMRGVKGAHRQLVEIARALVDEPRV
                     LFLDEPNASLGEDESERLFDVVRGLRDRGVAVVLISHRLREVYSVADQIVVMRDGHKV
                     ADAPVAELPIERAIGFITGRSRTAGAVVLPVAIAAAAATDVAPLLEVRNLAGPGFVEA
                     SFDIRPGEILGMSGLVGSGRTEIAHAVIGAAVAGAGTITFGGHVGAFADPGQALKAGI
                     AFVPEGRRDAVFYGQSVDFNVRAGFWGLGRPGAARQNRAGRSRTVAALMRQLAVKARS
                     PDVRASTLSGGNQQKLLFARALSTGPRLLILDEPTHGVDVGTKREIHDLVRTLAAEGM
                     AVWFISSEVEEVVALATRILVVHQGRIAGELPGGTSIEAVLTRNFGETGVLDD"
     gene            2357..3376
                     /locus_tag="VHZ56_11580"
     CDS             2357..3376
                     /locus_tag="VHZ56_11580"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4298652.1"
                     /translation="MTDHAAGPNAVPDAAATTLRPAPGERLRRLTREWGSELIVAVVI
                     VVLGGLVGLGNPVFFAPQNLLNILEAVSVVGIAAIGATLVIVSGNLDLSVGSIISLGG
                     LTCALPMLWGVPFELATLIGIATGCVAGAVNGLIVTYGRVNSFIVTLGTSSALAGLAL
                     YITDRHPINMPDASAWLGQGQLGPLPVSVVVLIVLAVGTQLFLSRSIAGQRITAVGDN
                     QRAAYLSGLPVRGTIMLTYILAGGFAAFAGVLQASSLANAAPAAGAALPLTVIAGVII
                     GGTSLLGGRGSVIGTLLGSILLGILSNAFILLRLNPEIQVVSLGIVIVLAALIDQWRM
                     RRSGS"
     gene            3402..>3773
                     /locus_tag="VHZ56_11585"
     CDS             3402..>3773
                     /locus_tag="VHZ56_11585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018114470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucosidase"
                     /protein_id="HEX4298653.1"
                     /translation="MWDDLAAIDPQFAYLGERARYVRFPLGGIGSGGFSISGSGRLVD
                     WSVRNRPALQGYNGYSHFAIKAEQAGRVLDARVLNGPYDENPSGGPGLRPMFDGFGHG
                     AMRQSLAGVPHFRRVDIYGRFP"
BASE COUNT          555 a         1301 c         1311 g          606 t
ORIGIN      
        1 gcggtgctca agaagttcaa caccgaagtc gactatgtca cggtcaacga cttcacgcag
       61 gacgcggtga acgccgccgg ccgcgccacg ctgctgcagg gctacgacgc catcgccttc
      121 ctgccgctcg acaacggcgc ctgcccgctg atcaaggatg cggtgaaggc caatgtgaag
      181 gtcgcggtgt tcatcaccac cgccgattgc gccaaggatg cgggggcgct gttctttcat
      241 ggcgaagacc tcgaccaggc ctgggggccg gtggcggtgg gcgctgcggt gaaggcggtc
      301 aacgccgatc cgatgtgggc cggcaagccg tgcaaggcgg gcgtcatcac cggcgcgttc
      361 tcggtgccca cgcacgagac catgcgcaag gcgatcctcg ccggcctcgc ggggaccaat
      421 atcagcccgg tgagcgacgg cgtcgaagtc gaacaggatc tgagcaaggt ggggccggcg
      481 gtcaaagcct acatcaccgg cgatccggac gatctgtgcg ccatcttcgt cgatatcggc
      541 gatgccggcg cggcggctgc ggcgctcacc gacgaccagg ccaagcacat caagatcgtc
      601 agcgccgact tcacgcaggg aggtgtcgag cagatgcgca aaggcaagca ggccatcctg
      661 atcggccagg atccattcgg cgaggcgtat gatacggcga tcctgctcta taatgcgatc
      721 gtcaccggca ccgcgccgga ctttcacgag ccggtcaaga actccatcat gacgccggac
      781 aacatcgatg cgctgatgaa ggcgcaggcc gacggcacgg cgccctgacc acagccgacg
      841 gggactagaa cagtgatcga gggccgcggc ctgaccaagc gctttggtgg cgtcgtggcc
      901 ctcgatgcgg tggacatctc cgtcgcaccg ggccggatca ccgcgctcct gggcgaaaac
      961 ggcgccggca agtcgacgct cgtcgcctgc ctgtcgggcg cctaccgggc cgaccagggc
     1021 gaggtgctgg tcgatgggac gacgcagcgc ttccggtcgc ccgacgacgc gcggcgggcc
     1081 gggatcagcg tgatccacca ggaaccgcaa atgctcgaac agcaatcggt tgccgccaac
     1141 atctacctgc cgcggctggc accgcggccg ctgcggccga cgccgctgcg cgagatgaac
     1201 cgccgggccg ggcagcacct gctggcgctc ggcatccgcg acctcgatcc gcaggcgagg
     1261 atgcgcgggg tgaagggcgc ccatcggcag ctggtcgaga tcgcccgcgc cctcgtcgac
     1321 gagccgaggg tgctgtttct cgacgaaccc aatgccagcc tcggcgaaga cgaatccgag
     1381 cgcctgttcg acgtcgtccg cgggctgcgg gatcgtggcg tcgccgtggt gctgatcagc
     1441 caccggctgc gcgaggtcta ttcggtcgcc gaccagatcg tcgtgatgcg cgacggccac
     1501 aaggtcgccg acgccccggt cgccgagttg ccgatcgagc gagcgatcgg gttcatcacc
     1561 ggccggtcaa ggaccgccgg tgccgtggta ttgccagtcg ccattgcggc cgcagccgcc
     1621 accgatgtcg cgccgctgct cgaggtgcgc aacctcgcgg gaccgggctt tgtcgaggcc
     1681 agcttcgata tccgcccggg cgaaatcctc ggcatgtccg ggctcgtcgg ctccggccgc
     1741 accgagatcg cccatgcggt gatcggcgcg gcggtcgccg gtgccggcac catcacgttc
     1801 ggcggccatg tcggggcgtt cgccgatccc ggccaggcgc tgaaggcggg catcgccttc
     1861 gtgccggaag ggcggcgcga cgcggtgttc tacggccagt cggtggattt caacgtgcgc
     1921 gccggcttct ggggactggg ccgccccgga gccgcccggc agaaccgcgc cggccgcagc
     1981 cggaccgtcg cggcgctgat gcggcagctg gcggtgaagg cgcgctcgcc cgacgtccgg
     2041 gcctcgaccc tgtcgggcgg caaccagcag aagctgctgt tcgcccgggc cctgtccacc
     2101 ggcccgcgac tgctcatcct cgatgagccg acgcacggcg tcgacgtcgg caccaagcgc
     2161 gagatccacg acctggtccg gacgctcgcc gccgagggca tggcagtgtg gttcatttcc
     2221 agcgaggtcg aggaagtggt ggcgctcgcg acccgcatcc tcgtggtgca ccaggggcgg
     2281 atcgccggcg aactgcccgg cggaacctcg atcgaagccg tgctgacgcg caattttgga
     2341 gagacgggtg tcctcgatga ctgaccatgc cgccggaccg aacgccgtcc cggatgcggc
     2401 ggcgaccacc ctccggcccg ctccgggcga gcgcctccgg cgcctcaccc gcgaatgggg
     2461 cagcgagctg atcgtcgccg tggtgatcgt cgtgctcggc ggcctcgttg gcctgggcaa
     2521 cccggtgttc tttgcgccgc agaacctgct caacatcctc gaggcagttt ccgtcgtcgg
     2581 catcgccgcg atcggcgcga cgctggtgat cgtctcgggc aatctcgacc tgtcggtcgg
     2641 ctcgatcatc agcctcggcg gcctgacgtg tgccctgccg atgctgtggg gtgtgccgtt
     2701 cgagctggcc acgctgatcg gcatcgccac cggctgcgtg gccggcgccg tcaacggcct
     2761 gatcgtcacc tatggccggg tcaactcgtt catcgtcacg ctcggcacgt cgtcggcgct
     2821 ggctggattg gcgctctaca tcaccgatcg gcatccgatc aacatgccgg acgcgtcggc
     2881 gtggctcgga cagggccagc tcgggccgct gccggtgagc gtggtggtgc tgatcgtgct
     2941 ggcggtgggg acccagctgt tcctgtcgcg cagcattgcc ggccagcgca tcacggcagt
     3001 cggcgacaac cagcgtgccg cctacctctc gggcctgccg gtgcggggca ccatcatgct
     3061 cacctacatc ctcgccggcg gctttgcggc gttcgccggc gtgctgcagg cgagctcgct
     3121 ggccaatgcg gctccggcgg ccggcgccgc cctgccgctc accgtcatcg ccggcgtcat
     3181 catcggcggc accagcctct tgggcggccg cggcagcgtc atcggcacgc tgctcggctc
     3241 gatcctgctg ggcattctca gcaacgcctt catcctgctg cggctcaatc cggagatcca
     3301 ggtggtgagc ctcggcatcg tcatcgtgct ggcggcgctg atcgaccagt ggcgcatgcg
     3361 ccggtccggc agctgatcgc ccgccaaccg gaacgcgcat catgtgggac gacctcgctg
     3421 ccatcgatcc gcaattcgcc tatctcggcg agcgggcgcg ctatgtgcgc tttccgctcg
     3481 gcggcatcgg ctcgggcggg ttttcgatct cggggtcggg ccggctggtc gactggtcgg
     3541 tgcgcaaccg tccggcgctg cagggctaca acggttattc gcatttcgcc atcaaggcgg
     3601 aacaggcggg ccgggtgctc gacgcgcggg tgctcaacgg cccctatgac gagaatccct
     3661 ccggcgggcc cggcctcagg ccgatgttcg acggcttcgg ccacggggcg atgcggcaat
     3721 cgctggccgg cgtgccgcat ttccgtcgcg tcgatatcta cgggcgcttt ccc
//
LOCUS       DATAZA010000458         6403 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3198491, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000458 DATAZA010000000
VERSION     DATAZA010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6403
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3198491"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..410)
                     /locus_tag="VHZ56_11590"
     CDS             complement(<1..410)
                     /locus_tag="VHZ56_11590"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HEX4298654.1"
                     /translation="MARRGLATSGFALGKTVQVLLLAAIAVGLMASGAWASGRVALVV
                     GNGSYATLGTLANPTNDAEDIAATLRGMGFQVTVADNADERGFTELLSNFATAATDAD
                     VALFYYSGHGLQYRSENYLVPVDATLENRFSLTH"
     gene            complement(558..3863)
                     /locus_tag="VHZ56_11595"
     CDS             complement(558..3863)
                     /locus_tag="VHZ56_11595"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX4298655.1"
                     /translation="MMNFLERVLRTPRVVLTIMVALLVAGGVAYATLPRESFPAIDIP
                     YFYISVTDTGVSPADSERLLGKPIEDKIKDIDGLSHYTTTATQGFASILLEFDVNTNK
                     DKAEADVRAALEGIGALLPTDATTPTITAVSTAMFPSISVAVYGDVPERALEQRAKDL
                     QDALQKLPEVQSADLSGSRDEMMQITIDQAKLQAYDLTAAQLLDALAKNNMVVPGGTI
                     DTGHGSFNVQVPGLINTPEDVYTLPLKTSGDTVVTFGDVAQITRTFKDATSYADVNGK
                     PAITLGVVKKLGTNVIDVVDKVRAATETLTSTWPAGIQHSFLLDQSEQAKSQFNSLQA
                     AVLTAVALVMIVCVGTLGIRPALMIGTSIPISFMIAFLVTSLLGMTLNMMIMFGLVLA
                     VGVLVDDPIVVVEYAERKLQEGVPRRDAFIMAAKKMFVPVVSATATTLCAFVILLFWP
                     GIIGKFMSYLPIIVIVVMGASLLSALVFMPVIGALIARTHIDPVAKAKADIVMYPDKF
                     DVKKVGGLTGAYVRVMSKLLHYPLVTLPVGFAVIVAIFMFAHPSGVVLFPDSEPEQGT
                     VDVIARGNYSPMQIRDLMREVEIKVLGVQGIQDAVMSFGGTGGSSFGGNAPPDTIGTI
                     QLQLLPWADRLPAAQIFQQIRDQSQSISGLDIEIAAAQNGPPSGKAINLRVESQDYNT
                     LIPVVAKLRDYVQNQVQGTVDVEDGRPSPGIDWQVTIDRVAAAKYGIGVRELSPYVQL
                     VTDGVKVGSYQPEDATDELDIRVRLPQDERSFDALDSLKIATAQGEVPVSNFIKRTPV
                     PKVATVSRYDGSYSMTVAANLQPGINTNDKVQQVKQWVQDQTKAGTIPSSVQVSFEGE
                     DEQNAETGAFIVKAFVVALAMIALVLLLEYNSFWQVFITISTVGMSLAGVMIGLAVTH
                     TPFSMIMTGLGVVALAGIVVKNGIVLTDTYNHYNRGDGVEPIKAMLLTISQRVRPVLL
                     TATVTALGVIPMALNVEFDFIGREITVGGLAGTWFTALSTALVSGLFVSTALTLVMVP
                     VMIVAPKVARHQIGGFFVGLWNLPGRLFGAIFRRRSKAVTPEGEIVDVPEQPQALPAP
                     AEDEAEPSRHAAE"
     gene            complement(3860..5077)
                     /locus_tag="VHZ56_11600"
     CDS             complement(3860..5077)
                     /locus_tag="VHZ56_11600"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX4298656.1"
                     /translation="MRAIYSYGVALVIVLVLAVWLATGTLVVGGKGAGNGEKPVVSLI
                     EKNGGPLTNAVEKSGINDKASAAIDPSQTIAERTDAQGNGANAAPRSVRIDVLKAQNM
                     PIDVPLLGKTKAKASVTVVAQTSDTVQQVNVIKGQNVKPGDTLCTLDPGARQLAVQQA
                     QAGADQAQTAYDSNQALVQKGLAAQNSSLAAQATLASAKTALQNAQLELGRTVIKTDI
                     GGVVEDPLAQVGSMLAAGAPCATVVQLDPMLVTASVPEAKIQYARVGLSAKVTTVTGD
                     TVDGKVTYVGATADDATRSFPIEIEVPNADGKLRDGVTATAVVDVGTAPVQVIPQSAL
                     TLDDNGVLGIRTVESGSKVAFHEVAPIKDTRDGVWVIGLPSTINLITVGQEYVEPGQI
                     VDAKTADGEPAAS"
     gene            complement(5091..5633)
                     /locus_tag="VHZ56_11605"
     CDS             complement(5091..5633)
                     /locus_tag="VHZ56_11605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009759834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX4298657.1"
                     /translation="MNVRTICLAILYDSEATGYEIRKLSTEGEYSYFVDASFGAIYPA
                     LQKLESDGQVTSRVEQQDGKPAKKIYVITPAGRREFINSLFEQLGEDEYRSEFLLFAR
                     FASELPQSLVQVRLRERLASLDEAIAELDRLKTNHSQPADCWIIDYGRSCMAFARDYI
                     DTHMGELIALARPDAAAAAE"
     gene            complement(5768..>6403)
                     /locus_tag="VHZ56_11610"
     CDS             complement(5768..>6403)
                     /locus_tag="VHZ56_11610"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HEX4298658.1"
                     /translation="STGIPVLAEESAAAGIVPTLGRRFFVVDPLDGTKEFLKRNGEFT
                     VNIALVEDGRPTLGVVLAPATGATFTGGPDGAFEITERDERVPLHTVADGPMKVVASR
                     SHGHEALEGFCSAFQVVDDVSVGSSLKFCLVARGEAQLYPRFTPTCEWDTAAGQAVLE
                     AAGGAVLALDGTPLRYGKGGQNLNPFFIAAANVDLAARGAAKMRELLAQTR"
BASE COUNT         1049 a         2176 c         2031 g         1147 t
ORIGIN      
        1 tcgtgggtca gcgagaagcg gttctcgagc gtcgcgtcca ccggcacgag atagttctcg
       61 ctgcggtact gcagcccgtg gccggaatag tagaacagcg ccacgtcggc gtcggtggcg
      121 gcggtggcga aattcgacag cagctcggtg aagcctcgtt cgtcggcgtt gtcggcgacc
      181 gtcacctgaa agcccatgcc gcgcagcgtc gccgcgatgt cctcggcgtc gttggtgggg
      241 ttggcgaggg tgccgagcgt cgcgtagctg ccattgccga ccaccagcgc cacccggccg
      301 ctggcccagg cgccgcttgc catcaggccg acggcaatag cggcgagcag caggacctgc
      361 acggtcttgc ccagggcaaa cccagacgtc gccaaacccc gacgcgccac ccaccactcc
      421 ggcagaagca gacccagcgt ccaattccgc aggttatcaa ccaccaagcc tgcggttcaa
      481 gcctgatgct cccgaacctg gacaggcaaa aggcccgctg atggcgggcc ttcggcagtt
      541 ttgtgctgga gagccggcta ttcggcggcg tgccggctcg gctccgcctc gtcctcggcc
      601 ggcgcgggca gggcctgcgg ctgctccgga acgtcgacga tttcgccctc cggcgtcacc
      661 gccttgctgc ggcgccggaa gatcgccccg aacagccggc ccggcaggtt ccacagtccg
      721 acgaagaagc cgccgatctg gtgcctggcc actttcggcg ccacgatcat caccggcacc
      781 atcaccagcg tcagcgccgt cgacacgaag aggcccgaca ccagcgccgt gctgagcgcc
      841 gtgaaccagg tgccggcgag gccgcccacg gtgatctcgc ggccgatgaa gtcgaactcg
      901 acgttcagcg ccatcgggat cacgcccagc gccgtcaccg tcgcggtgag cagcaccgga
      961 cggacgcgct ggctgatcgt cagcagcatc gccttgatcg gttcgacccc gtcgccacgg
     1021 ttatagtggt tgtaggtgtc ggtgagcacg atgccgttct tcaccacgat gccggcgagc
     1081 gccaccaccc cgaggcccgt catgatcatc gagaacggcg tgtgcgtcac cgccaggccg
     1141 atcatcacgc cggccagcga catgccgacc gtcgagatgg tgatgaacac ctgccagaag
     1201 ctgttgtact cgagcagcag caccagcgcg atcatcgcca gcgccacgac gaacgccttg
     1261 acgatgaacg ccccggtctc ggcgttctgc tcgtcctcgc cctcgaacga cacctgcacg
     1321 ctcgaaggaa tggtgccggc cttggtctgg tcctgcaccc actgcttgac ctgctgcacc
     1381 ttgtcgttgg tgttgatccc cggctgcagg ttggcggcga ccgtcatcga gtacgacccg
     1441 tcatagcggc tgaccgtcgc caccttcggc accggcgtgc gcttgatgaa attgctcacc
     1501 ggcacctcgc cctgcgccgt ggcgatcttc agcgagtcga gcgcgtcgaa gctgcgctcg
     1561 tcctgcggca gccgcacccg gatgtcgagt tcgtccgtcg cgtcctccgg ctggtacgag
     1621 ccgaccttca cgccatcggt gacgagctgc acataggggc tgagctcgcg cacgccgatg
     1681 ccgtatttgg ccgcggcgac ccggtcgatc gtgacctgcc agtcgatgcc gggcgagggc
     1741 cgtccgtcct cgacgtcgac ggtgccctgc acctggttct gcacatagtc cctgagcttg
     1801 gcgaccaccg ggatcagcgt gttgtagtcc tggctttcca cccgcaggtt gatcgccttg
     1861 cccgacggcg gcccgttctg cgccgccgcg atctcgatat cgaggcccga gatcgactgc
     1921 gactggtcgc ggatctgctg gaagatctgt gcggccggca gccggtccgc ccacggcagc
     1981 agctgcagct ggatggtgcc gatcgtgtcc ggcggcgcat tgccgccgaa gctgctgccg
     2041 ccggtgccac cgaacgacat caccgcgtcc tggatgccct ggacgccgag gaccttgatc
     2101 tcgacttcgc gcatcaggtc gcggatctgc atcggcgagt agttgccgcg cgcgatcacg
     2161 tccaccgtgc cctgctcggg ctcggagtcg gggaacagca cgacgccgct cggatgcgcg
     2221 aacatgaaga tcgccacgat caccgcaaag cccaccggca gcgtcaccag cggatagtgc
     2281 agcagtttgc tcatcacccg cacataggcg cccgtcagcc cgccgacctt cttcacgtcg
     2341 aacttgtcgg gatacatcac gatatcggcc ttggccttcg ccaccgggtc gatatgcgtg
     2401 cgcgcgatca gtgcgccgat caccggcatg aacaccagcg ccgacagcag cgaagcgccc
     2461 atcaccacga tcacgatgat cggcaggtag ctcatgaact tgccgatgat gcccggccag
     2521 aacagcagga tgacgaacgc gcacagcgtc gtcgccgtcg ccgagacgac cggcacgaac
     2581 atcttcttgg ccgccatgat gaaggcatcc cgccggggga cgccctcctg cagctttcgc
     2641 tcggcgtatt cgaccaccac gatcgggtcg tcgacaagca cgcccaccgc cagcaccagg
     2701 ccgaacatga tcatcatgtt gagcgtcatg ccgaggaggc tggtgaccag gaacgcgatc
     2761 atgaacgaga tcgggatcga tgtgccgatc atcagcgccg gccggatgcc gagcgtgccg
     2821 acgcagacga tcatcaccag cgcgacggcg gtcagcaccg cggcctgcag cgagttgaac
     2881 tggctcttgg cctgttcgga ctggtcgagc aggaacgaat gctggatgcc ggccggccat
     2941 gtgctggtca gcgtttcggt cgcggcccgc accttgtcga cgacgtcgat gacgttggta
     3001 ccgagcttct tgacgacgcc cagcgtgatc gccggcttgc cgttgacgtc ggcatagctg
     3061 gtcgcatcct tgaacgtgcg ggtgatctgc gccacgtcgc cgaacgtcac cacagtgtcg
     3121 cccgaggtct tcagcggcag cgtgtagacg tcctcgggcg tgttgatgag cccgggcacc
     3181 tgcacgttga acgagccgtg gccggtgtcg atcgtgccgc ctggcaccac catgttgttc
     3241 ttggccagcg cgtcgagcag ttgcgcggca gtcaggtcgt aggcctgcag cttggcctgg
     3301 tcgatggtga tctgcatcat ctcgtcgcgc gacccgctga ggtccgccga ctgcacttcg
     3361 gggagcttct gcagggcgtc ctgcaggtcc ttggcgcgct gctcgagcgc gcgctcgggc
     3421 acgtcgccat agaccgcgac ggagatcgag gggaacatcg ccgtcgacac ggcggtgatc
     3481 gtcggcgtcg tcgcgtcggt cggcagcagg gcgccgatgc cctccagcgc cgcgcggacg
     3541 tcggcctcgg ccttgtcctt gttggtgttg acgtcgaact cgagcaggat cgaagcgaag
     3601 ccctgcgtcg ccgtcgtcgt gtagtggctg agcccgtcga tatccttgat cttgtcttcg
     3661 atcggcttgc cgagcagccg ctcggagtcc gccggcgaca cgccggtatc ggtcaccgag
     3721 atgtagaaat acgggatgtc gatggcgggg aagctctcgc gcggcagcgt tgcatacgca
     3781 actccgccgg cgaccagcag cgccaccatg atggtgagaa cgacgcgcgg cgtcctgagg
     3841 acccgttcga gaaaattcat catgatgccg caggctcccc gtccgcagtc ttggcgtcga
     3901 cgatctggcc gggctcgacg tattcctggc cgaccgtgat gagattgata gtactgggca
     3961 gtccgatcac ccacacgccg tcgcgcgtgt ccttgatcgg cgccacctcg tggaatgcca
     4021 ctttactgcc gctctcgaca gtgcggatgc ccagcacgcc gttgtcgtcg agggtcagtg
     4081 ccgactgcgg tatcacctgc accggcgcgg tgccgacgtc gaccaccgcg gtggccgtga
     4141 cgccgtcgcg cagcttgccg tcggcgttcg gcacctcgat ctcgatcggg aacgagcggg
     4201 tcgcatcatc ggccgtggcg ccgacatagg tgaccttgcc gtccaccgtg tcgccggtga
     4261 ccgtggtcac cttggccgaa aggccgacgc gcgcatattg gatcttggcc tcgggcaccg
     4321 aagccgtcac cagcatcggg tcgagctgca ccaccgtcgc gcagggtgca cctgccgcca
     4381 gcatcgagcc tacctgcgcc agtggatctt cgaccacgcc gccgatgtcg gtcttgatga
     4441 cggtgcggcc gagttcgagc tgcgcgttct gcagcgccgt cttggcgctg gccagcgttg
     4501 cctgcgcggc gagggaactg ttctgcgccg cgaggccctt ctgcaccagg gcctggttgg
     4561 aatcataggc cgtctgcgcc tggtcggcgc cagcctgcgc ctgctgcacc gccagttgcc
     4621 gtgcccccgg gtccagcgtg cagagcgtat cgcccggctt cacattctgg cccttgatga
     4681 cgttgacctg ctgcacggta tccgacgtct gggcgacgac ggtcaccgag gccttggcct
     4741 tggtcttgcc gagcagcggc acgtcgatgg gcatgttctg cgccttgagc acatcgatgc
     4801 gtaccgagcg cggtgccgca ttggcgccgt tgccctgcgc atcggtacgc tcggcaatcg
     4861 tctggctcgg atcgatcgcc gccgatgcct tgtcgttgat gccggacttc tcgaccgcat
     4921 tggtcagtgg cccgccgttc ttttcgatca gcgaaaccac cggtttttcg ccgttgccgg
     4981 cacccttgcc gccgacaacc agcgttcctg tcgccagcca gacggcgagc acgaggacga
     5041 tgaccagagc tacgccgtag gagtaaatcg cgcgcattta gaaagaccct ctattcggca
     5101 gcggcggcgg catcgggccg cgccagcgca atcagttcgc ccatgtgggt gtcgatgtag
     5161 tcgcgggcaa aggccatgca agaccgcccg tagtcgatta tccagcaatc cgccggctgc
     5221 gaatggttgg ttttcagccg atcgagctcg gcaatggcct cgtcgagcga ggccagccgc
     5281 tccctcagcc gcacttgcac gagcgactgt ggcaattcgg acgcaaaacg cgcgaatagc
     5341 aggaactcgc tgcggtactc gtcctcgccc agctgctcga acagcgaatt gatgaactcg
     5401 cgccgtcccg ccggggtgat gacatagatt ttcttcgccg gcttgccgtc ctgctgctcg
     5461 acccggctgg tcacctgccc gtcgctctcg agcttctgca gcgccggata gatcgcgccg
     5521 aagctcgcat ccacgaagta gctatattcg ccctcggtcg acagcttgcg gatctcgtag
     5581 ccggtcgcct cgctgtcgta gaggatcgcc aggcagatgg ttcggacgtt catggcatat
     5641 tcctgtgcgg catatgcttg gccgcaatat gacggccgta tatacgtgga cggaatgcgc
     5701 cgcaaccgtt cggcgcgcat gaaagccatg cactgatgtc gcggttaaca gatcgttttc
     5761 gacaggatca gcgggtttgg gccagcaatt cgcgcatctt ggccgctccc cgcgccgcca
     5821 gatcaacgtt tgccgcggcg ataaagaacg gattgaggtt ctggccgccc ttgccgtagc
     5881 gcagcggcgt gccgtcgagt gccagcaccg cccctccggc cgcctccagc accgcctgtc
     5941 cggctgcggt gtcccattcg caggtgggcg taaacctcgg ataaagctgc gcttctcccc
     6001 gcgcaaccag gcagaatttc agcgacgagc cgaccgacac atcatcgacc acctggaacg
     6061 cgctgcagaa tccctccagc gcctcatgcc cgtgcgagcg tgatgccacc accttcatcg
     6121 gaccgtcggc gaccgtgtgc agcggcacgc gctcgtcacg ctcagtgatc tcgaacgccc
     6181 cgtccgggcc gccggtgaag gtggcgccgg tagccggcgc cagcaccacg cccagcgtcg
     6241 gccggccatc ttcgaccaga gcgatgttca ctgtgaactc cccgttgcgc ttgaggaatt
     6301 ccttggtccc gtccaatggg tcgacgacga agaaccgtcg cccgagcgtc ggcacgatgc
     6361 cagcagccgc gctctcttcg gccagcaccg gaatgccggt cga
//
LOCUS       DATAZA010000459         2423 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4126347, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000459 DATAZA010000000
VERSION     DATAZA010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2423
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4126347"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2385
                     /locus_tag="VHZ56_11615"
     CDS             <1..2385
                     /locus_tag="VHZ56_11615"
                     /inference="COORDINATES: protein motif:HMM:NF024117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEX4298659.1"
                     /translation="AIAADYERQKRARSLLDFDDLVERLAALLADQDQGMWVRYKLDS
                     GISHILVDEGQDTNPDQWDVISALIAEFFAGDSAVTRPRTLFVVGDQKQSIFSFQGAD
                     PEAFVELGRQVYYSARAVKLEMTQLKLHFSFRTLDNLLKAVDRVFARADLQDGVLEEA
                     FAHSTARAESGGRVTLWPPVKEIEDDSDPDNWATEPPAVQTQSAMRRNAERMAREIKG
                     WIASGRPLGPRGVPVTADDVLILVQVRSVLFHEIIRALIREGIPTPGADRLAVTSHIG
                     ALDLMALGDVLSNPADNLQLAALLRSPLFEVSEAELMALAQPRGKDVTLWQAMAQSPI
                     ASVVAARDQLRRWRSRLDVDRPFDLYAEVLYREGGLRRFRARFGSEIDDVAAEFLDLA
                     LKHEQSEQPSLLGFLAELRSREVIIKRELADTGTGVRVMTVHGAKGLEAPIVILADAA
                     TTEEGRDRRSIYMEPGTPLFFHAASKATHTTQTMRHRQAADAAQKAEYWRKLYVAMTR
                     AEDELYITGYLSKARDGAGSWYEAIEAALRPEAQVVRDADGAETALVYPLALAAATAP
                     AEARRPPVPMEPLLLPELPPYRLRRIVRPSSLGGTDVERVLETAAETALAVPRDPQAA
                     RREGVVLHALLQHLSRLAPDDRPAVAERALAVLLPEAPERHEALAGKALSILGRPELA
                     GLFGASSRAELPILAQGHENGRPISIAGRIDRLVVEPGRVLVVDYKSDAVAPASEAAV
                     PAAYRQQLGLYALVAGQLFPGHEVRGAILWTGPESLMNLAPEGLAEAVAGFTIG"
BASE COUNT          366 a          756 c          963 g          338 t
ORIGIN      
        1 gccattgcgg ccgactacga gcggcagaag cgggcccgct cgctgctcga tttcgatgac
       61 ctggtcgagc ggctggcggc gctgctggcc gaccaggacc agggcatgtg ggtgcgttac
      121 aagctcgaca gcggcatcag ccacatcctc gtcgacgagg ggcaagacac caatccggac
      181 cagtgggacg tgatcagcgc gctgatcgcc gagttcttcg ccggcgacag cgccgtgacc
      241 cggccgcgga cgctgttcgt ggtgggcgac cagaagcagt cgatcttctc gttccagggc
      301 gccgacccgg aggcgttcgt cgagctcggg cggcaggtgt attattcggc gcgggcggtg
      361 aagctggaga tgacgcagct gaaactgcat ttcagtttcc gcacgctgga caatctgctc
      421 aaggccgtcg accgggtgtt cgcgcgggcg gacctgcagg acggggtgct ggaggaggcg
      481 ttcgcgcaca gcacggcgcg ggccgagagc ggcggacggg tgacgctatg gccgccggtc
      541 aaggagatcg aggacgacag cgatcccgac aactgggcga ccgagccgcc ggcggtgcag
      601 acgcagagcg cgatgcggcg caacgccgag cggatggcgc gcgagatcaa gggctggatc
      661 gccagcggcc ggccgctcgg gccgcgcggc gtgccggtga cggccgacga cgtgctgatc
      721 ctggtgcagg tgcgcagcgt gctgttccac gagatcatcc gggcgctgat ccgcgagggc
      781 atcccgacgc cgggggccga ccggctggcg gtgaccagcc atatcggagc gctcgacctg
      841 atggcgctgg gcgatgtgct gagcaatccg gccgacaatc tgcagctggc ggcgctgctg
      901 cgttcgccgc tgttcgaggt gagcgaggcc gagctgatgg cgctggcgca gccgcgcggc
      961 aaggacgtga cgctgtggca ggcgatggcg cagagcccga tcgcgtcagt cgtggcggca
     1021 cgggaccagt tgcgccgctg gcgcagccgg ctcgatgtcg accggccgtt cgacctctat
     1081 gccgaggtgc tctatcgcga gggcgggctg cggcggttcc gggcgcgctt cgggtcggag
     1141 atcgacgacg tggctgcgga gttcctcgac ctcgcgctca agcacgagca gagcgagcag
     1201 ccctcgctgc tggggttcct ggccgagctg cgcagccgcg aggtgatcat caagcgcgag
     1261 ctggccgaca ccggcacggg ggtgcgggtg atgacggtgc acggggccaa ggggctcgag
     1321 gcgccgatcg tgatcctcgc cgatgcggcg acgacggaag aggggcgcga ccggcgctcg
     1381 atctacatgg agccgggcac gccactgttc ttccatgcgg ccagcaaggc gacccacacg
     1441 acgcagacga tgcggcaccg gcaggcggcc gacgcggcgc agaaggcgga atactggcgc
     1501 aagctctacg tggcgatgac gcgggccgag gacgaactct atatcaccgg ctacctgagc
     1561 aaggcgcggg acggcgccgg cagctggtac gaggcgatcg aggcggcgct gcggccggag
     1621 gcgcaggtgg tgcgcgatgc ggacggggcg gagacggcgc tggtctatcc gctggcgctg
     1681 gcggcggcga cggcaccagc ggaggcgcga cgaccgccgg tgccaatgga gccgctgctg
     1741 ctgccggagc tgccgcccta tcggctgcgc cgcatcgtgc ggccgtcgag cctgggcggg
     1801 accgatgtgg agcgggtgct ggagacggcg gccgagacgg cgctggcggt gccgcgcgat
     1861 ccgcaggcgg cgcggcgcga gggcgtggtg ctgcatgcgc tgctgcagca tttgagccgg
     1921 ctggcgccgg acgaccggcc ggcggtggcg gagcgggcgc tggcggtgct gctgccggaa
     1981 gcgccggagc ggcacgaggc gctcgccggc aaggcgctgt cgatcctcgg ccggccggag
     2041 ctcgccgggc tgttcggcgc gagcagccgg gccgagctgc cgatcctcgc gcaggggcac
     2101 gagaacggcc ggccgatcag catcgccgga cggatcgacc ggctggtggt cgaacccggc
     2161 cgggtactgg tcgtcgacta caaatccgac gcggtggcgc cggcgagcga agcggcggtc
     2221 ccggccgcct accggcagca gctggggctc tatgcgctgg ttgcaggcca gctgttcccc
     2281 ggccatgagg tgcgcggcgc gatcctctgg acagggccgg agtcattgat gaatctggcg
     2341 ccagaagggc ttgccgaagc ggtggcgggc ttcaccatag ggtgatatgc attgaaggct
     2401 tgctggactc ttcctagctt ttg
//
LOCUS       DATAZA010000460         5413 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2037986, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000460 DATAZA010000000
VERSION     DATAZA010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5413
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2037986"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1299
                     /locus_tag="VHZ56_11620"
     CDS             <1..1299
                     /locus_tag="VHZ56_11620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HEX4298660.1"
                     /translation="AVLDALWLWKRDAAYLKLFDYWKTVFAIVFGMGVVSGIVISYQF
                     GTNWARFADKAGPVIGPLMGYEVLTAFFLEAGFLGIALFGRKRVGDGLHMFAVAMVAV
                     GTLISATWIISANSWMQTPAGYGTNAAGQFIPLDWWAIVFNPSFPYRLVHTVLAAFLT
                     TAFAVGAVGAWHLLKDNSNRQARIMFSMAMWMAALVTPIQIVAGDQQGLNTLEHQPAK
                     IAAMEGDYDTVPQTPLILFGIPDDSAQQTRWAVEIPRLGALILTHDINGSVKGLKDFP
                     PDQRPQALIPFFTFRIMVGLGVLMLLTGLWSLWARWRRTLYTSRWLHRAALVMGPSGF
                     VAVLAGWYTTETGRQPFTVYGLLRTADSLSNIDASAVGASLVAFILVYFVVFGAGVFY
                     ILRTVSKPPEGEKEELTSGPTRTAGITPIQQTESGSTPHA"
     gene            1292..2293
                     /gene="cydB"
                     /locus_tag="VHZ56_11625"
     CDS             1292..2293
                     /gene="cydB"
                     /locus_tag="VHZ56_11625"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003521957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016682 - oxidoreductase activity, acting
                     on diphenols and related substances as donors, oxygen as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HEX4298661.1"
                     /translation="MPELSFIWAGIIAFAVLAYVVLDGFDLGIGILFPLFPEAADRDQ
                     MTNSVAPVWDGNETWLVLGGGGLMAVFPLAYATVLPALYVPIILMLLGLIFRGVAFEF
                     RFRTRRWRPVWDWGFALGSITAGFMQGIALGALVQGIRIADRQYAGGWWDWLTPFSLL
                     TGVALVIGYSLLGACWLNLKTIGPLQAKARRLAGIAAVATFVLIGVVSLWTPFLNSIY
                     FTRWLQWPTAIFSGLVPLLLAGCAFGLWQGLSTGRHLQPFIAALGVFVLGFAGIGISF
                     YPYIVPGALTIRDAAAPDSSLGFLLVGAIVLVPIILAYTGYAYWVFRGKLDPAEGYH"
     gene            2290..2418
                     /locus_tag="VHZ56_11630"
     CDS             2290..2418
                     /locus_tag="VHZ56_11630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018324084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298662.1"
                     /translation="MSARRLAVSRLAWFVGLWLAGVASVGLLGYLIGLVLQSPAKG"
     gene            2722..3825
                     /locus_tag="VHZ56_11635"
     CDS             2722..3825
                     /locus_tag="VHZ56_11635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298663.1"
                     /translation="MDCLNWMLTDPAKHQQFCEPGHDYIIPWPEGNGGQSGAPSCGTD
                     STAYITESAYLLAHDRNNCCHSAPSAAAYVLTGDRNCCVPSVSYQPSLDGTPGIVLAH
                     DRCGGCTQDDSYAVPLDGTPSIILAGNRGDCGGCQQTESFDMGSPAASGIILAGNRGD
                     CGGCSQDGSFEMGTSAVPGIILAGDRGDCGGCQPNAYHVPSASGPDLLLTGNRGDCGG
                     CNNVPSAFHMAPDGAPALLLAGNRDCGGCDQGAAFRVPLDGAPAILLAGDCGGGCPLA
                     FRTPADGGPSLLLAGNRGDCGGCNPYGRLSYRPGVDGPSLLPVTCGGGCQQTPEAFRP
                     TEGSLPWVLPVDNDCNINGDVRLPVISAPQLWI"
     gene            complement(3887..>5413)
                     /gene="cysC"
                     /locus_tag="VHZ56_11640"
     CDS             complement(3887..>5413)
                     /gene="cysC"
                     /locus_tag="VHZ56_11640"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004020 - adenylylsulfate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HEX4298664.1"
                     /translation="AELAVVLIDARKGVLTQTRRHSFILSLIGVKHVVLAINKIDLVG
                     YDRTVFDAIEAEYREFAKDLGFETLVAIPVSALKGDNILRPSASMPWYAGPQLVPYLE
                     TVEVSTDRTQKPLRFPVQWVNRPNLDFRGFSGTVASGVVRPGDEVLIAASRKPAKITR
                     IVTMDGERDQAIAGEAVTLVLDREVDVSRGDMLVHPGETPEFSNQFQARMIWMSDDSA
                     LPGRSYLLKIGAQLVSATITDLKFRTNVNTLEQTAAKTLELNEVGTLTIATDKPIAFD
                     SYATNGLTGAFILIDRLSNTTLGAGVIDFGLRRAQNLSWQSFDVNRGVRAEMKGQRPA
                     VVWFTGLSGSGKSTVANLVEKRLAVEGRHAYILDGDNVRHGLNKDLGFTEEARVENIR
                     RVAEVARLMADAGLIVLVSFISPFRNERRLAREIAADVVFTEVYVDTPLEVCEARDPK
                     GLYARARRGEIKNFTGIDSPFEPPEHADIVLHGAVETPERMAERVYAEIFGWGLSPTA
                     "
BASE COUNT          774 a         1983 c         1651 g         1005 t
ORIGIN      
        1 gcggtactcg acgccctctg gctgtggaag cgcgacgccg cctacctgaa actcttcgac
       61 tactggaaga cggtgttcgc catcgtcttc ggcatgggcg tcgtttccgg catcgtcatc
      121 agctaccagt tcggcaccaa ctgggcccgc ttcgccgaca aggccggccc cgtcatcggc
      181 ccgctgatgg gctacgaggt gctcaccgcc ttcttcctcg aggccggctt cctcggcatc
      241 gcgctgttcg gccgcaagcg cgtcggcgac ggcctgcaca tgttcgcggt cgccatggtc
      301 gcggtgggga cgctgatctc ggccacctgg atcatttccg ccaacagctg gatgcagacg
      361 ccggccggct acggcaccaa tgccgcgggc cagttcattc cgctcgactg gtgggcgatc
      421 gtcttcaacc cgtccttccc ctatcgtctc gtccacaccg tgctcgccgc cttcctcacc
      481 accgccttcg ccgtcggcgc ggtcggcgcc tggcacctgc tcaaggacaa ttccaaccgc
      541 caggcccgca tcatgttctc gatggcgatg tggatggcgg cgctggtgac tcccatccag
      601 atcgtcgccg gcgaccagca gggcctcaac accctcgagc accagcccgc caagatcgcc
      661 gcgatggaag gcgactacga caccgtgccg caaaccccgc tgatcctctt cggcatcccc
      721 gacgacagcg cgcagcagac ccgctgggct gtagaaatcc cacggctcgg cgccctgatc
      781 ctcacccacg acatcaatgg ctcggtgaag ggcctcaagg acttcccgcc cgaccagcgg
      841 ccgcaggcgc tgatcccgtt cttcaccttc cgcatcatgg tgggcctagg cgtgctgatg
      901 ctgctcaccg ggctgtggtc gctgtgggcc cgctggcgcc gcacgctcta caccagccgc
      961 tggctgcacc gggcggcgct ggtcatgggg ccatccggct tcgtcgccgt cctcgccggc
     1021 tggtacacca ccgagaccgg ccgccagccc ttcaccgtct acggcctgct gcgcaccgcc
     1081 gacagcctgt ccaacatcga cgccagcgcc gtcggcgcct cgcttgtcgc cttcatcctc
     1141 gtctacttcg tcgtcttcgg agccggcgtg ttctacatcc tgcgcaccgt ctccaagccc
     1201 cccgagggcg aaaaggagga gctgacctcc ggccccaccc gcaccgccgg catcaccccc
     1261 atccagcaaa cggagtccgg gagcaccccc catgcctgaa ctgagcttca tctgggccgg
     1321 gatcatcgcc ttcgccgtgc tggcctatgt cgtgctggac ggcttcgatc tcggcatcgg
     1381 cattctcttt cccctgtttc ccgaggccgc cgaccgcgac cagatgacca actccgtcgc
     1441 tccggtctgg gacggcaacg agacctggct ggtgctcggc ggcggcgggc tgatggcggt
     1501 cttccccctc gcctacgcca ccgtgctgcc ggccctctac gtgcccatca tcctgatgct
     1561 gctcgggctg atctttcgcg gcgtcgcctt cgagttccgc ttccgcacca ggcgctggcg
     1621 accggtgtgg gactgggggt tcgccctcgg ctcgatcact gccggcttca tgcagggaat
     1681 tgccctcggg gcgctggtgc agggcatccg gatcgccgac cggcaatacg ccggcggctg
     1741 gtgggattgg ctgacgccct tcagcctgct gaccggcgtg gcgctggtca tcggttacag
     1801 cctgctcggc gcctgctggc tcaacctcaa gacgatcggt ccgctgcagg cgaaggcccg
     1861 gcggctcgcc ggcatcgctg ccgtcgccac cttcgtgctg atcggcgtcg tcagcctgtg
     1921 gacgccgttc ctcaactcca tctacttcac ccgctggctg caatggccga cggcgatctt
     1981 ttcgggcctc gtgcccctct tgctcgccgg ctgcgctttc ggtctgtggc agggcctcag
     2041 caccggtcgg cacctgcagc cgttcatcgc agcgctcggc gtcttcgtcc tcggcttcgc
     2101 cgggattgga atcagcttct acccgtatat cgtgccggga gcgctcacta tccgtgacgc
     2161 cgccgcgccc gacagttcgc tcggcttcct gctcgttggc gcaatcgtgc tggtcccgat
     2221 cattctcgcc tacaccggct acgcctactg ggtcttccgc ggcaagctcg accccgccga
     2281 gggctaccat tgagcgcccg gcgcctcgca gtcagccgcc tcgcctggtt cgtcggcctc
     2341 tggctcgccg gggtcgccag cgtcggcctg ctgggctacc tgatcggcct cgtcctgcaa
     2401 tccccggcga aggggtagga aaacctccgt tccagagttc cggacctgtc ttttcataag
     2461 acaacagatg tcttgcggaa gttcttgctt aatgcttgat taaggtcagg tcagtcgggt
     2521 cggctgacta tgcaactctt ggcggcgagc ggcgcgccac ctcggctttt ttcgaggtgt
     2581 agtatgcgta gaattgtatc gattatcctc caattggggg cattgctcgc tgcggctctg
     2641 cttgccgcgt cgatggcgtc cactccggct agtgcagacg caccacatca ctctgacaac
     2701 gccgcacaaa ttcagcacta catggactgc ctcaactgga tgctgaccga tccggccaag
     2761 caccagcagt tctgcgagcc cgggcacgac tacatcatcc cgtggcccga ggggaacggc
     2821 ggccagtccg gtgcgccgag ttgcggcacc gattccacgg cctacatcac tgaatcggcg
     2881 tatcttctcg cgcacgatcg caacaattgc tgccactccg cgcccagtgc tgccgcctat
     2941 gtgctgaccg gcgaccgcaa ctgctgcgtg ccgtcggtct cgtaccagcc ttcgctcgac
     3001 ggcacaccgg gcattgtcct ggcgcacgat cgctgcggcg gctgcacgca ggacgactcc
     3061 tacgccgttc cgctcgatgg caccccgtcg atcatccttg ccggcaaccg cggcgattgc
     3121 ggcggctgcc agcagactga atcgttcgac atgggatcac cggccgcttc cggcatcatc
     3181 ctcgccggca accgtggcga ctgcggtggc tgcagtcagg acggttcgtt cgagatgggc
     3241 acctccgcgg ttcccggcat catcctcgcc ggcgatcgtg gcgattgcgg tgggtgccag
     3301 cccaacgcct accacgtccc ctcggccagc ggccctgacc tgctgctgac cggcaatcgc
     3361 ggcgattgcg gcggttgcaa caacgttccg agcgccttcc acatggcccc ggacggcgcc
     3421 ccggcgcttc tcctggccgg caaccgcgat tgcggcggct gcgaccaggg tgcggcgttc
     3481 cgtgtcccgc tggatggcgc acccgccatc ctgctggccg gcgactgcgg cggcggctgc
     3541 cccctggcgt tccgcacgcc agccgatggt ggcccgtcgc tcctgctcgc cggcaaccgc
     3601 ggcgattgcg gcggctgcaa cccgtacggg cggctgagct atcgtcccgg cgtcgacggg
     3661 ccgtcgctgc tgccggtgac gtgcggtggt ggctgccagc agacgcccga ggcgttccgc
     3721 ccgaccgagg gttccctccc ctgggtgctt ccggtggaca acgactgcaa catcaatggt
     3781 gacgtccgcc tgccggtcat cagcgcgccg cagctctgga tctgatcgct gcgcaaaagc
     3841 atcgggccgc cgcggtgacg cggcggccct tttcattgca ccctggtcag gcggtgggag
     3901 acaggcccca gccgaagatc tccgcataga cgcgctcggc catccgctcc ggcgtctcga
     3961 ccgcgccatg cagcacgatg tcggcgtgct ccggcggctc gaacgggctg tcgatgccgg
     4021 tgaaattctt gatctcgccg cgccgcgccc gggcgtagag gcccttcggg tcgcgcgcct
     4081 cgcagacctc gagcggtgtg tcgacgtaca cttccgtgaa cacgacgtcg gcggcgatct
     4141 cgcgcgccag ccgccgctcg ttgcggaacg gcgagatgaa cgacaccagc acgatcagtc
     4201 ccgcgtcggc catcagccgc gccacttctg ccacccgccg gatgttctcg acccgcgctt
     4261 cctcggtgaa cccgaggtcc ttgttgagcc cgtgccgcac attgtcgcca tcgaggatgt
     4321 aggcgtggcg cccttcgacc gcgagccgct tctcgaccag gttcgcgacg gtcgacttgc
     4381 ccgacccgct gagccccgtg aaccagacca cggccggccg ctgccccttc atctcggccc
     4441 gaacgccgcg gttgacgtca aaactctgcc agctgaggtt ctgcgcccgc cgcaggccga
     4501 aatcgatcac cccggcgccg agcgtcgtat tcgacagccg atcgatgagg ataaaggcgc
     4561 ccgtaagccc atttgtcgcg tagctgtcga acgcgatcgg cttgtccgtc gcgatcgtca
     4621 gcgtccccac ctcgttgagc tcgagcgtct tggccgccgt ctgctccagc gtgttgacgt
     4681 tggtgcggaa cttgaggtcg gtgatcgtcg ccgacaccag ctgcgcgccg atcttgagca
     4741 ggtacgagcg gcccggcagc gcgctgtcgt cgctcatcca gatcatccgc gcctggaact
     4801 ggttggaaaa ctccggcgtc tcgcccgggt gcaccagcat gtcgccgcgc gacacgtcca
     4861 cctcgcggtc gagcaccagc gtcaccgcct cgccggcgat ggcctggtcg cgctcgccat
     4921 ccatcgtcac gatgcgcgtg atcttcgccg gcttgcgcga tgcggcgatg agcacctcgt
     4981 cgcccggccg cacgacgccc gaggcgaccg tgcccgaaaa gccgcggaag tcgagattgg
     5041 gccggttcac ccattgcacc ggaaaccgca gcggcttctg cgtccgatcg gtcgaaacct
     5101 cgacggtctc caggtacggc accagttgcg gccccgcgta ccacggcatg ctggcgctcg
     5161 gccgcaggat gttgtcgccc ttcagcgccg acactgggat cgccaccagc gtctcgaacc
     5221 cgaggtcctt cgcgaactcc cggtattcgg cctcgatcgc gtcgaacacc gtccggtcgt
     5281 agccgacgag atcgatcttg ttgatcgcca gcaccacgtg cttcaccccg atcaggctga
     5341 ggatgaagct gtgtcgccgc gtctgcgtca gcacgccctt gcgcgcatcg atcagcacca
     5401 ccgcgagctc ggc
//
LOCUS       DATAZA010000461         2374 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_994497, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000461 DATAZA010000000
VERSION     DATAZA010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2374
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_994497"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..121
                     /locus_tag="VHZ56_11645"
     CDS             <1..121
                     /locus_tag="VHZ56_11645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2794 domain-containing protein"
                     /protein_id="HEX4298665.1"
                     /translation="PKLRARQGQYMVTGQDGRVLKRGHELAVVLRVLELTVVR"
     gene            complement(143..640)
                     /locus_tag="VHZ56_11650"
     CDS             complement(143..640)
                     /locus_tag="VHZ56_11650"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX4298666.1"
                     /translation="MSDPIFRRFAWSDVPAIAAIYAHYVRDTVITFDTEVPSEAAMAE
                     KFGHMVDLGHPIIVVEQAGRLIGYAYASTYRPRAAYRFTAEDSIYLAPEATGQGLGGR
                     LLDRLLEDSRAFGFRQMLAVITAERANSIRLHEKHGFRFIGRYEALGYKFDRWLDIVH
                     LQRAV"
     gene            complement(717..1466)
                     /locus_tag="VHZ56_11655"
     CDS             complement(717..1466)
                     /locus_tag="VHZ56_11655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HEX4298667.1"
                     /translation="MAEFDRPSVAARPGTAAVVDQGLRSYMLKVYNYMGIGLVITGVV
                     AYFSYAGSVVQTTGGLELTSFGAAIFESPLRWVVMLAPLAFVLVLSFGIRRLSTPMAQ
                     LLFWVFAAVMGLSLSSIFLVYTQTSIAQVFFISAATFGAMSLYGYTTKRDLTQYGSFL
                     MMGLIGVVIASVVNIFLNSSGLSFAISIIGVLVFVGLTAWDTQKIKESYSVGFGADVL
                     AKGAIMGALSLYLDFINLFLMLLRIFGNQRN"
     gene            1709..2248
                     /gene="thpR"
                     /locus_tag="VHZ56_11660"
     CDS             1709..2248
                     /gene="thpR"
                     /locus_tag="VHZ56_11660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HEX4298668.1"
                     /translation="MPRLFTGLEIPYELQFALSLKRGGLPGARWIDPENYHITLCFIG
                     DVDNHVADEVSYELDRLAHSEAFSIRLSHLGAFGGDKPRALYAGVENSAALQRLQAAQ
                     ERMLRRAGLEPDGRKFVPHVSLARLRGAPAIEVAEFIHHAGHFAPLEFPVGRFVLFSS
                     RASVGGGPYLVEQSYPLAA"
BASE COUNT          435 a          734 c          832 g          373 t
ORIGIN      
        1 cccgaagctg cgggcgcggc agggccagta catggtcacc ggccaggacg gccgggtgct
       61 gaagcgcggg cacgagctcg ccgtcgtgct gcgggtgctc gagctcaccg tcgttcgcta
      121 ggggacgcga ggctaggcgc ggtcacaccg cccgctgcag gtggacgatg tcgagccagc
      181 ggtcgaattt gtagccgagg gcttcgtagc ggccgatgaa gcggaagccg tgcttttcgt
      241 ggaggcggat ggagttggcg cgctcggcgg tgatcaccgc cagcatctgc cggaagccga
      301 aggcgcggct gtcctcgagc aggcggtcga gcagccggcc gccgaggccc tggccggtgg
      361 cctcgggggc gaggtagatc gaatcctcgg cggtgaagcg gtaggcggcg cgcggccggt
      421 aggtcgaggc ataggcgtag ccgatcagcc ggcccgcctg ctcgacgacg atgatgggat
      481 ggccgaggtc gaccatgtgg ccgaattttt ccgccatggc ggcttcgctc ggcacctcgg
      541 tgtcgaaggt gatgaccgtg tcgcggacgt agtgggcata gatggcggcg atcgccggca
      601 cgtcggacca ggcgaaacgg cggaagatcg gatcggacat cggaggctcg gcaaacgaaa
      661 gggccgcgat ccggtgcgga tcgcggccct gttaaagccg aagccctgcg agattgctag
      721 ttgcgctggt tgccgaagat gcgcagcagc atcaggaaca ggttgatgaa gtcgaggtag
      781 aggctcagcg cgcccatgat ggcgcccttg gccagcacgt cggcaccgaa gccgacgctg
      841 tagctttcct tgatcttctg ggtatcccag gcggtgaggc cgacgaacac caggacgccg
      901 atgatcgaga tggcgaagct cagccccgag gagttgagga agatgttgac caccgacgcg
      961 atcaccacgc cgatcagccc catcatcagg aacgagccat actgcgtcag gtcgcgcttg
     1021 gtggtgtagc cgtaaaggct catggcgccg aaggtggcgg ccgagatgaa gaacacctgg
     1081 gcgatcgagg tctgggtgta gacgaggaag atcgagctca gcgacagccc catcaccgcc
     1141 gcgaagaccc agaagagcaa ttgcgccatc ggcgtcgaca gccggcggat gccgaagctc
     1201 agcaccagca cgaaggcgag gggagcaagc atcacgaccc agcgcagcgg gctctcgaag
     1261 atcgccgcgc cgaagctggt gagctcgagg ccgccggtgg tctgcaccac cgagccggca
     1321 taggagaagt aggcgacgac gccggtgatc accaggccga tgcccatgta gttgtagacc
     1381 ttgagcatgt agctccgcag gccctggtcg acgaccgcgg cggttcctgg ccgcgcggcg
     1441 acggacggac ggtcgaattc agccatggtc aatatcccct tgggtaaacc gtggggcccg
     1501 gccaaccggg cctttgccgc agaatatgga cgccggggcg ggcgaataca agggccgctg
     1561 cagccgctta acaaagtgta acctttgccg gccaaggggt tagcgccgcg cgttgcagcg
     1621 ctgtcatgaa cttgcagccc cgactcacta tgctaggctt gcggacgtgc cgatgccgaa
     1681 tcggcagcct cgacgggaga cgggtcagtt gcccaggctc tttaccggcc tcgaaatccc
     1741 ctacgaattg cagttcgcgc tgtcgctcaa acgcggcggc ctccccggcg cccgctggat
     1801 cgacccggaa aactaccaca tcacgctgtg cttcatcggc gacgtcgaca accacgtcgc
     1861 cgacgaggtg agctacgagc tcgaccggct cgcccattcc gaggccttca gcatccggct
     1921 ctcgcacctc ggggcattcg gcggcgacaa gccgcgggcg ctctatgcgg gggtcgagaa
     1981 cagcgcggcg ctgcagcggc tgcaggcggc gcaggagcgg atgctgcggc gtgccggcct
     2041 cgagcccgac ggccgcaaat tcgtgccgca tgtgtcgctg gcgcggctgc gcggcgcccc
     2101 ggcgatcgaa gtggccgagt tcatccacca cgccggccat ttcgcgccgc tggagttccc
     2161 ggtcggacgc ttcgtgctgt tctcgtcgcg cgcctcggtg gggggcgggc cctacctggt
     2221 ggaacaaagc tacccgctgg cggcgtgagg cggcgccgtt aacttggtgt taaccctcaa
     2281 ggatcacacc aaatcccggc aaatccggtg tcaaattacc gacaagattg ccgataatct
     2341 tgcggtatcc agttccggcc ccggctttga gagc
//
LOCUS       DATAZA010000462         3896 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2271778, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000462 DATAZA010000000
VERSION     DATAZA010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3896
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2271778"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..354)
                     /locus_tag="VHZ56_11665"
     CDS             complement(<1..354)
                     /locus_tag="VHZ56_11665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018095817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,4'-dihydroxyacetophenone dioxygenase family
                     protein"
                     /protein_id="HEX4298669.1"
                     /translation="MYDTLIGSAHPNAAREAQIVAVPEDERVWVPQAEGVWFRPLLLN
                     TVQGQWCNLLRVRRAGILSRHLHPAPVHGYVIKGRWHYLEHDWIAETGSYVFEPPGEI
                     HTLTVPADCPEMITFF"
     gene            complement(383..1321)
                     /locus_tag="VHZ56_11670"
     CDS             complement(383..1321)
                     /locus_tag="VHZ56_11670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4298670.1"
                     /translation="MAKRRIAVVGVGKIAVDQHLPVLDRSHDFEVAATVSTRGVAHRG
                     LPVFRTQAELFAALPKVDLVAICTPPGVRHAYVREALDAGKDVLMEKPPAPTISELDD
                     LVAHARKKKRILFQTWHSRYNEAVDAARKIVKRDGVRRVRIDWRESVRKWHPGQDWVW
                     QPGGFGVFDPGINALSIFTKVLPFPVFVASARLKFPANRQTPIDVELVFKSDDKHQPE
                     LSAGFNWLEESGEVWTIAIETGRGDALSLENGGRLLRVNGAVAIENPDNEYEQIYDHF
                     AKLLKKGKSDVSDAPLRLVADACLLGARETVEPFDW"
     gene            1487..2704
                     /locus_tag="VHZ56_11675"
     CDS             1487..2704
                     /locus_tag="VHZ56_11675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013893489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4298671.1"
                     /translation="MTTVSLAAAQSPAAKTAFAIIFAVAFCHLINDIMQSLLTAIYPI
                     LKASYGLNFIQLGLLTLTFQCTASLLQPVIGIYTDKRPLPYSIAAGMGFTLIGLVVLG
                     FAHDYWLLLVGSAFIGFGSAVFHPESSRVARLASGGRHGFAQSTFQVGGNAGQAIGPL
                     LAAFVVLPHGQSSIAWFAVAALVGMLVLMRVGGWYTNHQRVHASRPAASRTLPLDRRT
                     TGVALTVLTILTFTKNIYTAAMGNYFTFFVIQKFGVSVQESQIVLFAFLGASAVGVFL
                     GGPIGDRFGARFVIWFSILGAVPFALLLPYADFTWTVVLSVLVGLIISSCFPAIVVFA
                     QELLPGRVGMVAGMFFGFAFGIGGIAAAALGALADAKGIGFVFQLTSYLPLLGLLTIF
                     LPRMQDKRVAAPA"
     gene            complement(2714..>3896)
                     /locus_tag="VHZ56_11680"
     CDS             complement(2714..>3896)
                     /locus_tag="VHZ56_11680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013891587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEX4298672.1"
                     /translation="AHLPDPPPGRTVVVGAGKASAVMAQAFERAWSGPLEGLVVTRYG
                     YAVPTERIEIVEAAHPVPDEAGFLAARRIMAKVHGLGPDDLVVALVSGGGSALLPAPG
                     PGLSFEDEQAVTRVLLASGVPIGVMNLVRNELSAIKGGRLAALAAPARVATLIVSDVP
                     GDDPALVASGPTVPIAGSRAEVRHLVALHGLALPPAAIELLASPDNLPPRPDDPRFAR
                     NTIRLVASSALSLDAAAAAARDRGIAAHILSDAVEGEARDVALVLAALAREIDTRDRP
                     FHRPALLLSGGETTVTVRGRGKGGRNAEFLLAFALAIEGFDGITALAADTDGIDGSED
                     NAGAIADGSSAARMRAAGIDPRAALANNDAYTAFKAIGDLVVTGPTGTNVNDFRAILV
                     R"
BASE COUNT          550 a         1231 c         1490 g          625 t
ORIGIN      
        1 gaagaaggtg atcatctcgg ggcagtcggc ggggacggtc agggtgtgga tctcgccggg
       61 tggctcgaag acgtaggagc cggtctcggc gatccagtcg tgctcgagat agtgccagcg
      121 gcccttgatg acgtagccgt gcaccggcgc gggatggagg tggcggctga ggatgccggc
      181 gcggcggacg cgcagcagat tgcaccactg gccctgcacg gtgttgagca gcagcgggcg
      241 gaaccagaca ccctcggctt gcggcaccca gacccgctcg tcctcgggga cggcgacgat
      301 ctgcgcctca cgcgccgcat tggggtgggc cgagccgatg agcgtgtcgt acattggcaa
      361 tctcccggtt gcgcgacgtt gcctaccagt cgaagggctc gacggtctcg cgagcgccga
      421 ggagacaggc atcggcgacg aggcggaggg gcgcgtcgga aacgtcggat ttgcccttct
      481 tcagcagctt ggcgaagtgg tcgtagatct gttcgtattc gttgtcgggg ttctcgatcg
      541 ccaccgcgcc attgacgcgc agcaggcggc cgccgttctc gagcgagagc gcgtcaccgc
      601 ggccggtctc gatggcgatg gtccagacct cgcccgactc ctcgagccag ttgaagccgg
      661 cggacagctc gggctggtgc ttgtcatcgg acttgaagac cagctcgacg tcgatcgggg
      721 tctgccggtt ggcggggaat ttcagccggg cgctggcgac gaagaccggg aacggcagca
      781 ccttggtgaa gatcgacagc gcattgatgc cgggatcgaa gacgccgaag ccgccgggct
      841 gccacaccca gtcctggccg gggtgccatt tgcggacgct ctcgcgccag tcgatgcgaa
      901 cacggcgcac gccgtcgcgc ttgacgatct tgcgcgccgc gtcgaccgcc tcgttgtagc
      961 gcgagtgcca ggtctggaag aggatgcgct ttttcttcct cgcatgggcg acgaggtcgt
     1021 cgagctcgga gatggtaggg gccggcggct tttccatcag cacgtccttg ccggcgtcga
     1081 gcgcctcgcg gacataggcg tggcggacgc cgggcggggt gcagatggcg acgagatcga
     1141 ccttgggcag ggccgcgaac agctcggcct gggtgcggaa caccggcagg ccgcggtggg
     1201 cgacgccgcg cgtcgagacc gtcgcggcga cctcgaaatc atggctgcgg tcgagcaccg
     1261 gcagatgctg atcgacggcg atcttgccga cgccgacgac ggcgatcctg cgcttggcca
     1321 agggaggctc cttctcaacg atccggcggg cacttaattc gatcggggcg aggttgggaa
     1381 gcgccgggcg gccggaattt tcggggggac gaacggattg gccggatggc ggagatgaca
     1441 agcggggccg gacgggtcta gaccgcccgg agcatcggag ctcaaagtga ccaccgtttc
     1501 cctcgccgcc gcgcagagcc cggccgccaa gaccgccttc gccatcatct tcgccgtggc
     1561 gttctgccac ctcatcaacg acatcatgca gtcgctgctg acggcgatct atcccatcct
     1621 caaggccagc tacgggctca atttcatcca gctcgggctg ctgacgctga ccttccagtg
     1681 cacggcctcg ctgctgcagc cggtgatcgg catctatacc gacaagcggc ccctgcccta
     1741 ttcgatcgcg gcgggcatgg gcttcacgct gatcggactg gtggtgctcg gcttcgcgca
     1801 cgattactgg ctgctgctgg tgggctcggc gttcatcggg ttcggctcgg cggtgttcca
     1861 tccggaaagc tcgcgcgtgg cgcggctggc gtcgggcgga cgccacggct ttgcgcaatc
     1921 gacgttccag gtgggcggca atgccggaca ggcgatcggg ccgctgctgg cggcgttcgt
     1981 ggtgctgccg cacgggcaga gctcgatcgc gtggttcgcg gtggcggcgc tggtcggcat
     2041 gctggtgctg atgcgggtgg gcggctggta caccaaccac cagcgcgtgc atgcgtcgcg
     2101 accggcggcg agccggacgc tgccgctcga ccggaggacg acgggggtgg cgctgacggt
     2161 gctgaccatc ctgacgttca ccaagaacat ctacacggcg gcgatgggca actacttcac
     2221 cttcttcgtc atccagaagt tcggggtgtc ggtgcaggag agccagatcg tgctgttcgc
     2281 cttcctcggc gcctcggcgg tcggggtgtt cctcggcggg ccgatcggcg accgcttcgg
     2341 ggcgcggttc gtgatctggt tctcgatcct cggcgcggtg ccgttcgcgc tgctgctgcc
     2401 ctatgccgac ttcacctgga ccgtcgtgct gtcggtgctg gtcggcctca tcatctcgtc
     2461 gtgcttcccg gccatcgtgg tgttcgcgca ggagttgctg ccgggccggg tgggaatggt
     2521 cgcggggatg ttcttcggct tcgccttcgg catcggcggc atcgccgcgg cggcgctggg
     2581 ggcactggcg gacgccaagg gcatcggctt cgtgttccag ctcacctcgt acctgccgct
     2641 gctcgggctg ctgacgatct tcctgccgcg gatgcaggac aaacgggtgg cggcgccggc
     2701 ctgacgaccg ccgtcaacgg acgaggatgg cgcggaagtc gttgacgttg gtgccggtcg
     2761 ggccggtcac cacgaggtcg ccgatggcct tgaaggcggt gtaggcgtcg ttattggcga
     2821 gcgcggcgcg cggatcgatg ccggcggcgc gcatgcgggc ggcgctgctg ccgtcggcga
     2881 tggcgccggc attgtcctcg gagccatcga tgccgtcggt gtcggcagcc agcgcggtga
     2941 tgccgtcgaa gccctcgatc gccagcgcaa aggcgagcag gaattcggcg ttgcggccgc
     3001 ccttgccgcg gccgcgcacg gtgaccgtgg tctcgccgcc cgaaagcagc agcgcggggc
     3061 gatggaacgg ccggtcgcgg gtgtcgatct cgcgggcgag cgcggcgagc accagcgcca
     3121 cgtcgcgggc ctcgccctcg accgcatcgg agaggatgtg ggcggcgatg ccccggtcgc
     3181 gggcggcagc ggcagcggcg tcgagcgaca gggcggacga ggcgacgagg cggatggtgt
     3241 tgcgggcaaa gcgcgggtcg tcgggccgcg gcggcagatt gtccggcgag gccagcagct
     3301 cgatcgcggc aggcggcagt gccaggccgt gcagcgcgac cagatgccgg acctcggcgc
     3361 gcgagccggc gatcggcacg gtggggccgg aggcgacgag cgccggatcg tcgccgggca
     3421 cgtccgagac gatgagggtg gcgacgcggg cgggcgcggc gagcgcggcg aggcggccgc
     3481 ccttgatggc gctgagctcg ttgcggacga ggttcatgac gccgatcggg acgccggagg
     3541 cgagcagtac gcgggtcacc gcctgctcgt cctcgaagct caggccgggc cccggcgccg
     3601 gcaacagggc cgagccgccg cccgagacca gcgccacgac gaggtcgtcg gggccgaggc
     3661 cgtggacctt ggccatgatg cggcgggcgg cgaggaaccc ggcttcgtcg ggcaccgggt
     3721 gggcggcctc gacgatctcg atgcgttcgg tcggcacggc gtagccataa cgggtgacga
     3781 cgaggccctc gagcgggccg ctccaggcgc gctcgaaggc ctgcgccatg accgccgagg
     3841 ccttgccggc gccgacgacg acggtgcggc ccggcggcgg atcgggcaga tgggcg
//
LOCUS       DATAZA010000463         2742 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3435319, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000463 DATAZA010000000
VERSION     DATAZA010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2742
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3435319"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..384
                     /locus_tag="VHZ56_11685"
     CDS             <1..384
                     /locus_tag="VHZ56_11685"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018855620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HEX4298673.1"
                     /translation="GIGDAGPCGRILVRGEPGWDIIPELYPIAGEPIIDKPGKGSFCA
                     TDLELILNQRGIDNIVLTGITTDVCVSTTMREANDRGYECLLLEDCCGATDWGNHLAA
                     INMVKMQGGVFGSVSNSAALIAGLP"
     gene            381..1931
                     /locus_tag="VHZ56_11690"
     CDS             381..1931
                     /locus_tag="VHZ56_11690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004680388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4298674.1"
                     /translation="MSPAAIGDFPPATRAVGVETTGMTMRFGSFTALDNVSIKVTPGS
                     FHALLGENGAGKSTLVKCIMGFYHPTAGTIQVDGREVEIVSPRDAAALSLGMVYQHFT
                     LVPSLTGAENLVISRQVVPGVIDWSKENRDLAAFMVKMPFQVPLDVPTGQLAAGQKQK
                     LEILKQLYLGRHFLVLDEPTSVLTPGEATEVLGLVRQMTEAGDITVLMISHKFHEVTA
                     FADEVSVLRKGKFVGTGKTSVLTPKDMAEMMIGEAKLAMLDNRAEVSAGARPILSVRG
                     LSAPDRSGLKQIYVADLKVRAGEIVGIAGISGNGQKEFLEVLAGQRPPTAGEIVVEGE
                     AYDASRNKAREHHVRFIPEEPLQNACAPKMTVAENMAFRTFDVKPDGHEASWINTRRI
                     KSYAAGLVSGFKVKTASLASPIASLSGGNVQRAVLARELTGEVDLLIASNPCFGLDFS
                     AVAEIRARIMKARNAGAAVLLLSEDLDELFELSDRILVMSGGELVYETPIATADIAVI
                     GAHMAGQH"
     gene            1931..2599
                     /locus_tag="VHZ56_11695"
     CDS             1931..2599
                     /locus_tag="VHZ56_11695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007826659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HEX4298675.1"
                     /translation="MAEIMAQPFGYDFDPVRTALIVIDMQRDFAEPGGFGESLGNDVS
                     RIQAIVPTVARLIEGFRNHGLTVIHTQECHRPDLSDLPPAKRDRGSPRLRIGDMGPMG
                     RILIAGEPGTAIISELAPIDGEPVIEKPGKGAFYATDLGRILKERAITHLVFAGVTTE
                     VCVQTTMREANDRGYVCLLAEDATESYFPEFKVAALAMIRAQGAIVGWTASTDQVLQG
                     LADA"
BASE COUNT          488 a          913 c          895 g          446 t
ORIGIN      
        1 ggcatcggcg atgccgggcc gtgcggacgg atcctggtgc gcggcgagcc gggttgggac
       61 atcatccccg agctctaccc gatcgccggc gagccgatca tcgacaagcc cggcaagggc
      121 agcttctgcg ccaccgatct cgagctgatc ctcaaccagc gtggcatcga caacatcgtg
      181 ctgaccggca tcaccacgga cgtctgcgtc tcgaccacca tgcgcgaggc caacgaccgc
      241 ggctatgagt gcctgctgct tgaggattgc tgcggtgcga ccgactgggg caaccacctc
      301 gcggccatca acatggtgaa gatgcagggc ggcgtcttcg gctcggtgtc gaactcggcc
      361 gccctcatcg cgggcctgcc atgagcccgg cggcgatcgg cgacttccca cccgcgacca
      421 gggcggtcgg cgtcgagacc acgggcatga ctatgcggtt cggctcgttc acggcgctcg
      481 acaacgtgtc gatcaaggtg acgccgggct cgttccacgc gctgctcggc gagaacggcg
      541 ccggcaagtc gacgctcgtc aaatgcatca tggggtttta ccaccccacc gccggcacca
      601 tccaggtcga cggccgcgag gtggaaatcg tctctccccg ggatgccgcg gcgctgagcc
      661 tcggcatggt ctaccagcat ttcacgctgg tgccgtcact gacgggcgcc gaaaacctcg
      721 tgatttcgcg ccaggtggtg ccgggcgtca tcgactggag caaggagaat cgcgatctcg
      781 ccgccttcat ggtgaaaatg ccgttccagg tgccgctcga cgtgcccacc ggccagcttg
      841 ccgccgggca gaagcagaag ctcgaaatcc tgaagcagct ctatctgggc cgtcacttcc
      901 tcgtcctcga cgagccaacc tccgtgctca cccccgggga ggccactgag gtgctcggac
      961 tggtgcggca gatgaccgaa gcgggcgaca tcacggtgct gatgatctcg cacaaattcc
     1021 atgaggtcac cgcgttcgcc gacgaggtgt ccgtactccg caagggcaag ttcgtcggca
     1081 ccggcaagac cagcgtgctg acgcccaagg acatggccga gatgatgatc ggcgaagcaa
     1141 agctggcgat gctcgacaac cgggccgagg tatcggccgg cgcccggccg attctgtcgg
     1201 tgcgtgggct ctcggcgccc gaccgctcgg gcctcaagca gatctacgtc gccgacctca
     1261 aggtgcgcgc cggcgagatc gtcggcattg ccgggatctc cggcaacggc cagaaggaat
     1321 tcctcgaggt gcttgccggc cagcggccgc cgacggccgg cgagatcgtc gtcgagggcg
     1381 aggcctacga cgccagccgg aacaaggcgc gcgagcacca tgtgcgcttc atccccgagg
     1441 agccgttgca aaatgcgtgc gcgccgaaga tgacggtggc ggagaacatg gccttccgca
     1501 ccttcgacgt gaagccggac ggccacgagg cgagctggat caacacgcgc cgcatcaaaa
     1561 gctatgccgc cgggctggtt tcgggcttca aggtcaagac tgcctccctc gcaagcccca
     1621 tcgcgtcgct ctccggcggc aatgtgcagc gcgccgtgct ggcacgggaa ctcaccggcg
     1681 aggtcgatct gctgatcgcc tccaatccgt gcttcgggct cgatttttcg gcggtggccg
     1741 aaattcgtgc ccggatcatg aaggcacgca acgccggcgc ggccgtgctg ctgctttcag
     1801 aggacctcga cgaactgttc gagctctccg accgcatcct ggtgatgtcg ggtggtgagc
     1861 tggtgtacga gacaccgatc gccacggccg atatcgccgt gatcggcgcg catatggcag
     1921 gccagcattg atggccgaaa tcatggcgca gccgttcggc tacgatttcg atccggtgcg
     1981 tacggcgctg atcgtcatcg acatgcagcg cgattttgcc gagccgggtg gctttggcga
     2041 atccctcggc aacgacgtga gccgcatcca ggcgatcgtg ccgacggtcg ccaggctcat
     2101 cgagggattc cgcaatcatg gcctgacagt gatccacacg caggaatgcc accggccgga
     2161 tctctccgac ctgcctcccg ccaagcgcga ccgcggcagc cccaggcttc gcatcggcga
     2221 catggggccg atggggcgca tcctgattgc cggcgagccc ggcaccgcca tcattagcga
     2281 actggcgccg atcgacggcg agccggtgat cgagaagccc ggcaagggcg ccttttacgc
     2341 caccgacctc ggccgcatcc tcaaggagcg cgccatcacc cacctcgtct ttgctggagt
     2401 gaccactgag gtctgcgtgc agacgacaat gcgcgaagcc aacgaccgcg gctacgtctg
     2461 tctcctcgcc gaagacgcga ccgagagcta tttccccgag ttcaaggtcg cggccctggc
     2521 catgatccgg gcccagggtg ccattgtcgg atggacggcg agcaccgacc aggtgctgca
     2581 gggcctcgca gatgcgtgaa catggctatc cagggctcat ccagggcgga tggcgcgacc
     2641 tcgatttcga gccgttccgg cacggggtga ccgtgcactg gctgcagaag gggaccgggg
     2701 acgagccgag cgccgcgatc ctcaaatacc tgcccggcgc aa
//
LOCUS       DATAZA010000464         2042 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1459099, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000464 DATAZA010000000
VERSION     DATAZA010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1459099"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..735)
                     /locus_tag="VHZ56_11700"
     CDS             complement(<1..735)
                     /locus_tag="VHZ56_11700"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008833832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEX4298676.1"
                     /translation="MPNATHMRHEIEQIPEATRRLLDRSSDRLEAAGAALGKLQPVMI
                     ATIARGSSDHAAAYLKYAIELVAGVPVASIGPSVMSIYGRELHLEGCGVLSISQSGKS
                     PDIVAMAQSARRNGGLGIALTNTPDSPLAAAADIAVDLAAGVEQSVAATKSFVSSVVA
                     GLAILAHWTGDAPLRASLAELPDAFARAIDCDWTPVLTAIEGRGSLYVLGRGPALAIA
                     EEAALKFKETCGIHAEAYSAAEVLHGP"
     gene            complement(735..1514)
                     /locus_tag="VHZ56_11705"
     CDS             complement(735..1514)
                     /locus_tag="VHZ56_11705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014133040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX4298677.1"
                     /translation="MTVADSLFGADSIALPPGGPLYLQLKRWIEDAVRRGAVGPGDAL
                     PSERDLAARMELSRVTVRKAVQHLVREGLLVQRHGSGTYVAPQSGRVEQSLSQLTSFA
                     EDMARRGMSVRSRWLDRGLYPPSPEETVALGLSAGESVARVARLRLSGDTPIAIERAA
                     LSSAVLPDPEAIGASLYAHLDRRGNRPVRAIQRIRAVSLGADDAALLELSPGVASLQI
                     ERTSYLGSGRAIEFTRSIYRGDTYDFIAELRLADIPAGARR"
     gene            1661..>2042
                     /locus_tag="VHZ56_11710"
     CDS             1661..>2042
                     /locus_tag="VHZ56_11710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008531050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4298678.1"
                     /translation="MAKPTPILRVLVAGLGNMGRSHALAYHRHAGYEVVGLVNRSAPR
                     LADELSAYPVLSEFGPALRALRPDLVSINTYTDTHADYAVMAMEQGAHVFVEKPLAVT
                     VADAERVVAAARANNRKLVVGYILR"
BASE COUNT          330 a          689 c          732 g          291 t
ORIGIN      
        1 cggaccgtgc agcacctcgg cggcgctgta ggcctcggcg tggatgccgc aggtttcctt
       61 gaatttcagt gcggcctctt cggcgatcgc cagcgccgga ccgcggccga gcacgtagag
      121 cgagccgcgg ccttcaatcg ctgtcagaac gggagtccag tcgcaatcga tggcgcgcgc
      181 aaacgcgtcg ggcaactcgg ccagtgacgc gcggagcggg gcatcgccgg tccagtgcgc
      241 gaggatcgcg agaccggcga cgaccgagct gacgaaactc ttggtcgccg ccaccgactg
      301 ctcgacgccc gccgcgaggt ccaccgctat atccgcggcg gccgcgagcg gcgagtccgg
      361 cgtgttggtg agggcgatgc cgaggccgcc gttgcggcgc gccgactgcg ccatggcgac
      421 gatgtcgggg ctcttgcccg actgcgagat cgacagtacg ccgcagccct cgaggtgcag
      481 ctcgcggccg tagatcgaca tcaccgacgg accgatcgac gccacgggca cgccggccac
      541 cagctcgatg gcgtatttga ggtacgcggc cgcgtggtcg gacgagccac gggcgatcgt
      601 ggcgatcatc accggttgca gcttgccgag ggcagcgccg gcggcctcca gccggtcgga
      661 cgagcgatcg aggagccggc gcgtcgcctc cgggatttgc tcgatctcgt ggcgcatgtg
      721 ggtggcgttg ggcatcagcg gcgggctccg gcggggatgt cggcgagccg cagctcggcg
      781 atgaagtcgt aggtgtcgcc acgatagatc gagcgggtga actcgatggc gcggccggag
      841 ccgagatacg atgtccgttc gatttgcagg ctcgccacac cgggagacag ctcgagcagc
      901 gcggcatcgt cggcaccgag gctgacggcg cggatgcgct gaatggcgcg caccggccgg
      961 ttgccgcgcc ggtcgagatg cgcatagagc gaggctccaa tcgcctcggg gtcgggcagc
     1021 acggcggacg acagcgcggc gcgctcgatg gcgatcgggg tgtcgcccga caggcgcagg
     1081 cgggcgacgc gggcgacgct ctcgccggcg gacaggccga gggccaccgt ctcttccggc
     1141 gacggcggat agaggccacg atcgagccag cgcgagcgca ccgacatgcc gcgacgcgcc
     1201 atgtcttcgg cgaacgaggt gagctggctc agcgactgct cgacgcggcc ggattgcggc
     1261 gcgacgtagg tgcccgagcc gtgccgctgc accagcagcc cctcgcgcac cagatgctgg
     1321 acggccttgc gcacggtaac acgcgacagc tccatgcgcg ccgcgaggtc gcgctccgac
     1381 ggcagcgcat cgcccgggcc aacggcgccg cggcgcaccg cgtcctcgat ccagcgcttg
     1441 agctgcaggt agagcggacc gcccggcggc agggcaatcg agtcggctcc gaacaggctg
     1501 tcggcaacgg tcacggcgat ccgatccggg cggtttcttc gcatgatacc aataccgtac
     1561 catttgccaa gccaattcgg gacgacagag caacgggcgg taggcccgct agacaagtgg
     1621 tatgagtttg gcattaatgc ggacgatgga gaccgcgcgc atggccaagc ccaccccgat
     1681 ccttcgtgtg ctcgtcgcgg gactgggcaa catgggccgc agccatgccc tcgcctatca
     1741 tcgccacgcg ggctacgagg tcgtcgggtt ggtcaaccgg tcagcgccgc gcctcgccga
     1801 tgaactctct gcgtacccgg tcctgtccga gttcggacct gcattgcggg cgctgcggcc
     1861 cgacctcgtg tcgatcaaca cctacaccga cacgcacgcc gactatgccg tgatggcaat
     1921 ggaacagggc gcgcacgtgt tcgtcgaaaa gccgctcgcc gtcaccgtcg ccgatgccga
     1981 acgggtggtc gcggcggcgc gggccaacaa ccgcaagctc gtcgtcggct acatcctccg
     2041 cc
//
LOCUS       DATAZA010000465         4455 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2852882, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000465 DATAZA010000000
VERSION     DATAZA010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4455
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2852882"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..697
                     /locus_tag="VHZ56_11715"
     CDS             <1..697
                     /locus_tag="VHZ56_11715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HEX4298679.1"
                     /translation="SVRSCLLAARTNARSVRTALTTDMWESLNSAWLEFAAVDPRETT
                     GSRLIELLQWVKQVSHRYRGALLSTFLRDDGYAFSQIGNFVERADNTARILDMKYYVL
                     LPRTDLIGGDVDIQQWTLILRAASAHRSYRHVYHDRYKAWNIADYLMLRPEMPRSLVF
                     SMSWINRTLDMLEEIYGGRGKGHDAAAEVTAMLEGTSMDRIFAYGLHEFLTEFIARNN
                     KITEAVAESYNFY"
     gene            697..1488
                     /locus_tag="VHZ56_11720"
     CDS             697..1488
                     /locus_tag="VHZ56_11720"
                     /inference="COORDINATES: protein motif:HMM:NF019977.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEX4298680.1"
                     /translation="MQLTLTHTLKFSLGTPARAVQHLLLTALDTPQQKVERWSIEMPG
                     MAEAAVFRDGFGNRAHLVSLAKPEGEIVVTVSGSVETTDKAGVLGRLEYDPMPAMFRR
                     PTDKAKCDPQLIEGLHDGPDRIALLHELMGRVHAALSGGDQAQSQSADGQSQSQSAGA
                     ARTDDFAHAFIGGARGLGIAARHVTGYRFDEDGSNFHGWAEAWDDRLGWIGFDPMHDQ
                     CPAEAYVRVASGLDAGSTLPIRSVPVWLEMPAETVELTAQPEPST"
     gene            complement(1467..2405)
                     /locus_tag="VHZ56_11725"
     CDS             complement(1467..2405)
                     /locus_tag="VHZ56_11725"
                     /inference="COORDINATES: protein motif:HMM:NF015509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HEX4298681.1"
                     /translation="MLDIFNVIIPVFGLIGLGYVAVRLRLFPADGTRGLIAFVNNFAT
                     PCLLCEGMLTSDFGNAFNLAIITPFYVGALVSLVGGILIARRLFGQRPGEAVASGFSA
                     TYTNTVLVGIPIILRAYGAPALPTMFSIIAFHAPFLITLAMLVMELSRRDGAPLGRTL
                     AVAAVRVVQNPLLWGVVLGALGNHFQVKLPEPAMAFLTMMSAAVLPASLFGLGGALNE
                     YKLSESWALATVMSLFKLVGQPLIAYLLMVPLLHVPIDIARYGVLLAAMPAGINVYIF
                     ATYYDRAVNVAANVVLISTVASIATITFWLYVLGSG"
     gene            2553..4073
                     /gene="glpD"
                     /locus_tag="VHZ56_11730"
     CDS             2553..4073
                     /gene="glpD"
                     /locus_tag="VHZ56_11730"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018117063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004368 - glycerol-3-phosphate
                     dehydrogenase (quinone) activity [Evidence IEA];
                     GO_process: GO:0006072 - glycerol-3-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HEX4298682.1"
                     /translation="MAKRDNITDIFVIGGGVNGCGIARDAVGRGYSVFLAEMGDLASG
                     TSSAATKLVHGGLRYLEHYEFRLVHEALAEREVLWAMAPHVIRPMRFVLPHHKGLRPA
                     WFLRLGLFVYDHLGARKLLPPTRTLDLRTDPLGRTLKEGYSKAFEYSDCWVDDARLVA
                     LTARDAADKGAIIRTHTKVIAATREDGGWTIKLQDIDTKIRGTVRARLLVNAAGPWVD
                     EVLRGSLGKNDAHNVRLVKGSHIVVRKLYEDERAYFFQNKDGRIIFVIPYERDFTLIG
                     TTDQDFTGDPHGVKISEDETQYLLAAASEYFEKPVTWQDIVWTYSGVRPLFDDHASKA
                     QEATRDYVLKTEGDAATGAVINVFGGKLTTHRRLSEEVLERIEKVLGAKGKPWTKGSK
                     LPGGEFGPTEFEAQVERLNELYPSLADKFLRRLARQYGTRAATLLGKATRMQELGEGF
                     GGDLTAREVDYLVENEWARSAEDVLWRRTKLGLRTGIGDKTRLDDYIAAKLARANK"
     gene            4070..>4455
                     /locus_tag="VHZ56_11735"
     CDS             4070..>4455
                     /locus_tag="VHZ56_11735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012061434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY family carbohydrate kinase"
                     /protein_id="HEX4298683.1"
                     /translation="MSGYILAIDQGTTSSRAIVFNDLQQIVGMGKMEFTQHFPASGWV
                     EHVPEEIWATCLWSAKTALKKAGIAAADVAAIGITNQRETTIVWDRATGKPIHNAIVW
                     QDRRTAAACEKLKRAGKEKLVSRKTGL"
BASE COUNT          841 a         1386 c         1598 g          630 t
ORIGIN      
        1 gtcggtgcgc tcgtgcctgc tggcggcgcg gaccaatgcg cgctcggtgc gcacggcgct
       61 caccaccgac atgtgggaga gcctcaattc ggcgtggctg gagtttgcgg cggtcgatcc
      121 gcgcgagacc acgggcagcc gactgatcga gctgctgcaa tgggtcaagc aggtgagcca
      181 ccgctatcgc ggcgcgctgc tctcgacgtt cctgcgggac gacggctacg ccttcagcca
      241 gatcggcaat ttcgtcgagc gggccgacaa cacggcgcgc atcctcgaca tgaaatacta
      301 cgtgctgctg ccgcgcaccg acctgatcgg cggcgacgtc gacatccagc aatggacgct
      361 gattttgcgc gccgcatcgg cgcaccgcag ctaccggcac gtctaccacg accgctacaa
      421 ggcctggaac atcgcggact atttgatgct caggccggag atgccgcggt cgctggtgtt
      481 ctcgatgagc tggatcaatc gcacgctcga catgctcgag gagatctatg gcggccgcgg
      541 caaggggcac gacgcggcgg cggaggtgac ggcgatgctc gaaggcacct cgatggaccg
      601 gatcttcgcc tacgggctgc acgaattcct gacggagttc atcgcccgca acaacaagat
      661 caccgaggcg gtggccgaaa gctacaattt ctactgatgc agctcaccct cacacatacg
      721 ctgaaatttt cactgggcac gccggcgcga gcggtgcagc acctgctgct gaccgcgctc
      781 gatacgccgc agcagaaagt ggaacgctgg tccatcgaga tgccggggat ggccgaggcg
      841 gcggtgttcc gcgacggttt tggcaaccgc gcgcacctcg tcagcctggc caagccggaa
      901 ggcgagatcg tggtcacggt gagcggcagc gtggaaacga ccgacaaggc cggggtgctc
      961 ggacggctcg aatacgatcc gatgccggca atgttccgcc ggccgacgga caaggccaaa
     1021 tgcgatccgc agttgatcga ggggctgcac gatggcccgg accgcatcgc gctgctgcac
     1081 gagctgatgg ggcgcgtgca cgcggcgctt tcggggggcg accaggcgca gagccagtcg
     1141 gcggacgggc agagccagtc gcaatcggcg ggcgcggcgc gaaccgacga ttttgcgcac
     1201 gcgttcatcg gtggcgcccg cgggctcggc atcgcggcac gccacgtcac gggctaccgg
     1261 ttcgacgagg acggctcgaa tttccacggc tgggcggagg catgggacga ccggctgggc
     1321 tggatcgggt tcgatccgat gcacgaccag tgcccggcgg aagcctatgt gcgggtggcc
     1381 tccggactcg acgccggctc gacgctgccg atccgcagcg tgccggtgtg gctggagatg
     1441 ccggccgaga cagtcgagct caccgctcag ccggagccca gcacgtagag ccagaaggtg
     1501 atggtcgcga tcgaggcgac ggtcgagatc agcacgacgt tggcggcgac attgacggcg
     1561 cggtcgtagt aggtcgcgaa gatgtagacg ttgatgccgg ccggcatggc cgcgagcagc
     1621 acgccgtagc gggcgatgtc gattggcacg tgcagcaggg gcaccatcag cagataggcg
     1681 atgagcggct ggccgacgag cttgaagagg ctcatcacgg tggccagcgc ccagctctcg
     1741 gacagcttgt attcgttgag ggcgccaccc agcccgaaca gcgaggcggg cagcacggcg
     1801 gccgacatca tggtcaggaa agccatcgcc ggttcgggaa gcttcacctg gaaatggttg
     1861 ccgagcgcac ccagcacgac gccccagagc agcgggttct gcaccacccg aacggccgcc
     1921 acggcgagcg tgcgcccgag cggggcgccg tcgcggcggc tcagttccat caccagcatg
     1981 gcgagggtga tgaggaacgg cgcgtgaaag gcgatgatcg agaacatcgt gggcagggcc
     2041 ggcgcaccgt aggcgcgcag gatgatcggg atgccgacga ggacggtgtt ggtgtaggtg
     2101 gccgagaatc cggacgccac ggcctcgccc ggccgctggc cgaagagccg tcgcgcgatg
     2161 aggatgccac cgaccagcga aaccagcgcg ccgacgtaga acggggtgat gatggcgaga
     2221 ttgaaggcgt tgccgaagtc cgaggtcagc atgccttcgc agagcaggca cggcgtggcg
     2281 aaattgttga cgaaggcgat cagccccctg gtgccatcgg cgggaaacag ccgcaggcgg
     2341 acggccacgt agcccagccc gatcaggccg aacaccggga tgatgacatt gaaaatgtcg
     2401 agcatggggg gcgccggccg atggggactc ccggctctgt tgaaccggcg ttcatcctgc
     2461 ggtcaagcgc cggcggcaat atttgtgaaa cccgacggtt gcgtgccaac ctctcgggcg
     2521 ataacgaaca gccaaggggt atgacgacgg cgatggccaa gcgcgacaat atcaccgaca
     2581 tcttcgtgat cggcggtggc gtgaatggct gcggcatcgc ccgggatgcg gtgggacgcg
     2641 gctattcggt gttcctcgcg gaaatggggg accttgcctc cggcacctcc tcggcggcga
     2701 ccaagctggt gcatgggggc ctgcgctacc tcgagcacta cgaattccgg ctcgtgcacg
     2761 aggcgctggc ggagcgcgag gtgctgtggg ccatggcgcc gcacgtcatc cggccgatgc
     2821 gcttcgtact gccgcaccac aagggcctga ggccagcctg gttcctgcgg ctcgggctgt
     2881 tcgtctacga ccacctcggg gcgcgcaagc tgctgccgcc gaccaggacg ctggacctgc
     2941 ggacggaccc gctcggccgg acgctcaagg aaggctacag caaggcgttc gagtattcgg
     3001 actgctgggt ggacgatgcg cggctggtgg cgctgacggc ccgcgacgcc gccgacaaag
     3061 gcgccatcat ccgcacccac accaaggtga tcgcggcgac gcgcgaagac ggcggctgga
     3121 ccatcaagct ccaggacatc gacaccaaga tccgcggcac ggtgcgggcg cggctgctgg
     3181 tcaacgcggc ggggccgtgg gtcgacgagg tgctgcgcgg atcgctcggc aagaacgacg
     3241 cgcacaatgt ccggctggtc aagggcagcc acatcgtggt gcggaagctc tacgaggacg
     3301 agcgggcgta cttcttccag aacaaggacg gccggatcat cttcgtcatc ccgtacgagc
     3361 gggatttcac gctgatcggc accaccgacc aggacttcac cggcgatccg cacggcgtca
     3421 agatctcgga ggacgagacc cagtacctgc tggcggcggc cagcgagtat ttcgagaagc
     3481 cggtgacctg gcaggacatc gtgtggacct attccggcgt ccggccgctg ttcgacgacc
     3541 acgccagcaa ggcgcaggag gcgacgcgcg attacgtgct gaagaccgag ggcgacgcgg
     3601 cgacgggcgc cgtcatcaac gtcttcggcg gcaagctcac cacgcaccgg cgcctcagcg
     3661 aggaagtgct ggagcggatc gaaaaggtgc tcggcgccaa gggcaagccg tggaccaagg
     3721 gcagcaagct gccggggggc gagttcgggc caaccgaatt cgaggcgcag gtggagcggc
     3781 tcaacgagct ctatccgagc ctcgccgaca agttcctgcg acggctcgcc cggcagtacg
     3841 ggacgcgcgc ggcgacgctg ctgggcaagg cgacccggat gcaggagctg ggcgagggtt
     3901 tcggtggcga cctgacggcg cgcgaggtcg actacctcgt cgaaaacgaa tgggcgcgat
     3961 cggccgagga cgtgctgtgg cggcgcacca agctcggcct caggaccggg atcggcgaca
     4021 agacgcggct cgacgactac atcgcggcca agctggcccg ggccaacaag tgagcggcta
     4081 catcctcgcc atcgaccagg gcacgacgtc gagccgggcg atcgtgttca acgacctgca
     4141 gcagatcgtc ggcatgggca agatggagtt cacccagcac ttcccggcgt cgggctgggt
     4201 cgagcacgtg cccgaggaaa tctgggcgac gtgcctgtgg tcggccaaga cagcgctgaa
     4261 gaaggccggc atcgccgccg cggatgtggc ggccatcggc atcaccaacc agcgcgagac
     4321 gaccatcgtg tgggaccggg cgaccggcaa gcccatccac aacgccatcg tctggcagga
     4381 ccggcggacg gcggcggcct gcgagaagct gaagcgtgcg ggcaaggaaa agctggtgag
     4441 ccgcaagacc gggct
//
LOCUS       DATAZA010000466         2092 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2970413, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000466 DATAZA010000000
VERSION     DATAZA010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2970413"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1407
                     /locus_tag="VHZ56_11740"
     CDS             <1..1407
                     /locus_tag="VHZ56_11740"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEX4298684.1"
                     /translation="GHLNKAARSYAQALTQRPDFPEAVLRVAWLQLEVGRIEEADATS
                     LHGLRLAPGLADAHRVRGNILGHRQRYAEAVAAMQQALALDPGFAAAYSDLATLHINF
                     GHRDEAIAALEQALALAPWMTQVQRALLDLRGQSPADMVATLAPRHANPQLPAHDRVH
                     LGFALGAAHEQLGNYSAALGYFADANAINRTTVDYDRSEDATAFDELKRAFPAELLAR
                     RRAESAAGAGMIFIVGMPRSGTTLTEQILASHPDVHGGGETMLVSEMVNARWRRPGQL
                     AYAELLSDLGDRGLEELGREIERRGFVDAGGRRCVTEKLPDNFRLLGLIAAVLPQARI
                     VHCHRDPADTCLSIFKQHFAGAGLQYAYDLTEIAAYYRLYEDLMRHWDEVLPIRPTVV
                     ELEAMVADQRGETERLLAYLGLPWADSCLDFFKTERSVRTVSALQVREPINAHGIGIA
                     ARYGAGLESLHRALRGDG"
     gene            1400..>2092
                     /locus_tag="VHZ56_11745"
     CDS             1400..>2092
                     /locus_tag="VHZ56_11745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007007678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEX4298685.1"
                     /translation="MAELTTIGFDADDTLWHHERFFQLTQQRFAELLRDYADPHHLSE
                     HLLAAERRNVPHYGFGVKGFMLSMIETAVEVTDGKVPGAVIGQVLEAGREMLRHPIEP
                     LPHAEAALVALGQTHRLILITKGDLFDQERKLAASGLGDHFDAVEIVSDKSAAVYDRL
                     FRRHGAAPEAAMMVGNSLASDVVPALTAGAWGVHVPSAYNWELDAHAEPVASPRFRRL
                     ADLGALPALVAAI"
BASE COUNT          324 a          696 c          742 g          330 t
ORIGIN      
        1 ggccatctca acaaagcggc ccgctcctat gcgcaggccc tcacccagcg accggatttt
       61 cccgaagccg tgctgcgcgt cgcgtggctg cagctggaag tgggacggat cgaggaggcc
      121 gacgcgacgt cgctgcacgg actgaggctg gcgccaggcc tcgccgacgc ccaccgcgtt
      181 cgcggcaaca ttctcggcca tcggcagcgc tacgccgagg cagtggccgc catgcagcag
      241 gccctggcgc tggatcccgg cttcgccgcc gcgtacagcg acctcgcgac gcttcacatc
      301 aacttcggac accgcgacga ggcgatcgcc gcgctcgaac aggcccttgc cctggcgccg
      361 tggatgacgc aggtgcagcg cgccctgctc gacctgcgcg ggcaatcgcc ggcggacatg
      421 gttgcgacgc tggcgccgcg tcacgccaac ccgcaattgc cggcccacga tcgcgtgcat
      481 ctgggctttg cgctgggcgc ggcccacgaa cagctgggca attacagtgc ggcgctcggc
      541 tatttcgcgg atgccaacgc catcaaccgc accaccgtcg actacgacag gtccgaggac
      601 gcaacagcgt tcgacgagct gaagcgcgcg ttcccggccg agctgctggc gcggcgccgg
      661 gcggaaagcg ctgccggggc ggggatgatc ttcatcgttg gcatgccgcg ctcaggaacg
      721 acgctcaccg agcagattct cgccagccac cccgacgtgc atggtggcgg cgagacgatg
      781 ctggtgagcg agatggtgaa tgcacgctgg cggcggccgg ggcagctggc ttacgcggaa
      841 ctgctgtccg acctcggcga tcgcggcctc gaggaactcg ggcgggagat cgagcggcgg
      901 ggctttgtcg atgccggcgg gcgccgctgc gtaacggaaa agctgccgga caatttccgg
      961 ctgctggggc tgatcgcggc agtgctgccg caggcgcgca tcgttcactg ccatcgcgat
     1021 ccggcggaca cctgcctgtc gatcttcaag cagcattttg ccggagcggg cctgcagtac
     1081 gcctacgacc tgaccgagat cgcggcttat tacaggctct acgaggacct gatgcggcac
     1141 tgggacgagg tattgccgat ccgcccgacg gtggtcgagc tcgaagcgat ggtcgccgac
     1201 cagcgcggcg aaacggaacg gctgctcgcc tatctgggcc tgccatgggc cgattcctgc
     1261 ctcgatttct tcaagaccga acggtcggtg cgcacggtca gcgccctcca ggtgcgcgag
     1321 ccgatcaacg cccacggcat cggcattgcc gcccgctacg gtgccgggct ggagtcgctg
     1381 catcgcgcgc tgcgcggcga tggctgagct caccaccatc ggcttcgatg ccgacgacac
     1441 gctgtggcat cacgagcggt tcttccagct gacgcagcag aggtttgccg agctgctgcg
     1501 ggactatgcc gatccgcacc atctgagcga gcatctgctg gcggcggagc ggcgcaacgt
     1561 tccgcattat gggttcgggg tgaaaggctt catgctgtcg atgatcgaga cggcggtgga
     1621 ggtcaccgat ggcaaggtgc ccggcgcggt catcggccag gtgctggagg ccggccgcga
     1681 gatgctgcgg catccgatcg agccgctgcc gcatgccgag gcggcgctcg tcgcgcttgg
     1741 gcagacgcac cggctgatcc tcatcaccaa gggcgacctg ttcgaccagg agcggaagct
     1801 cgcggcgtcg gggctgggag atcatttcga tgcggtcgag atcgtctcgg acaagagcgc
     1861 ggcggtgtac gaccggctgt tccgccgcca tggcgcggca ccggaggcgg cgatgatggt
     1921 gggcaattcg ctcgcctcgg acgtcgtgcc tgcgctcacc gcgggcgcct ggggcgtgca
     1981 cgtgccgtcg gcctacaatt gggagctcga cgcccacgcg gagccggtgg cgagcccgcg
     2041 gttccggcgg ctggccgacc tcggcgcgct gccggcgctg gttgcggcga tc
//
LOCUS       DATAZA010000467         4728 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_764646, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000467 DATAZA010000000
VERSION     DATAZA010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4728
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_764646"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1149
                     /gene="rpoN"
                     /locus_tag="VHZ56_11750"
     CDS             <1..1149
                     /gene="rpoN"
                     /locus_tag="VHZ56_11750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013893010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HEX4298686.1"
                     /translation="GSGSDGTDAPDIDQYIAARPTLAEHLGVQIGLLLTDPADRLIAR
                     FLADGLNEAGYLVLDLAAVAEQLGASLSAVEAVLARLQTLEPIGIFARSVRECLALQL
                     AERDRLDPLMQRLLDHLDLIAGHDLAALARAVGAERDDLLDMLAELRALDPKPGRAFE
                     AGPVEAVVPDVFVREGPSGWLVELNSDILPRVLVNRTYYAAVSAKARNAGEKSFLVDS
                     MQTANWLTKSLDQRAQTILKVATEIVRQQDQFLHRGIAFLKPMTLKLVADAIDMHEST
                     VSRVTTSKYVATPRGLFEMKYFFTTALASSTGAEEHSAEAVRHRIRLLIDAEPAADIL
                     SDDTIAELLDREQGIEVARRTVAKYREAMNIPSSVIRRRQKRALVAAR"
     gene            1308..1880
                     /locus_tag="VHZ56_11755"
     CDS             1308..1880
                     /locus_tag="VHZ56_11755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006933774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPF/RaiA family ribosome-associated protein"
                     /protein_id="HEX4298687.1"
                     /translation="MTLRVSGKNMDVGDALRTRAEGHFDGVVKKYFDGGYTGHLTLEP
                     EGSGFNALCLVHLDSGTILQATAYGGDAISAYEILTETIEKRLRRYNRKLKQHHHHAS
                     GEGSLEAQGDVLQAPGDSDELAEDYSPPVIAETTRSLRQMSVEEAVMELDLTQAEMVM
                     FRHAGHGGLNVVYRRADGNIGWIDPALRAN"
     gene            1927..2394
                     /locus_tag="VHZ56_11760"
     CDS             1927..2394
                     /locus_tag="VHZ56_11760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEX4298688.1"
                     /translation="MELRDILSQESVLVCTDIKTKRDVLTKLSDKVAALTGQPAAEIF
                     EALNDRESLGSTGLGNGIAVPHGKYAPLKGVMAVFMRLPSPVDFESVDDQPVDIVMML
                     LAPMGAGADHLKALARVARVLRTDSVADALRHSSDPATLYRILTQPLESTRAA"
     gene            complement(2409..2684)
                     /locus_tag="VHZ56_11765"
     CDS             complement(2409..2684)
                     /locus_tag="VHZ56_11765"
                     /inference="COORDINATES: protein motif:HMM:NF018343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1150 family protein"
                     /protein_id="HEX4298689.1"
                     /translation="MQDRPEEAIFDNPLRHLTPAQFMALGGNAVVYVRPINGKKLSEM
                     MDEPDLSDDDEFQMVVGADGSPLLVADSDEAVEDWLADKNFGIVALH"
     gene            complement(2698..3117)
                     /locus_tag="VHZ56_11770"
     CDS             complement(2698..3117)
                     /locus_tag="VHZ56_11770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HEX4298690.1"
                     /translation="MSRVSLFSAPFLLGFDAYEERIDRLSRAADGYPPYNIERSLDAD
                     GTERFLISIAVAGFAHAELEVDWEDNQLIVRGRQQDEQGREFLHRGIAARQFQRSFLL
                     ADGVEVKDAVLEHGMLVISVVRPRAPKLSRRIDIRSA"
     gene            3236..4096
                     /locus_tag="VHZ56_11775"
     CDS             3236..4096
                     /locus_tag="VHZ56_11775"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX4298691.1"
                     /translation="MPPETVAIVTPAFRAERWIAACVRSVVAQTWPHWQHWIVADDGA
                     DYEALLAAAGLRDPRLRFLASGTIGGGASRARNLALDRIEAPYVAILDADDRFKPDKL
                     AQAVAALQHHAIVSVALDEFDETGRRLRLVGQGADRELAPATYKWTCLSMDSMLVWDR
                     RRTDARYDLTLTNMTDLELLLQLCRTAPAVWHLGTPLHDYLKLAVSMSNGPGVTDKMI
                     RSKREILRRLETGFYPMADAAGPVGMAKFLRLSLSAEASYPAAAAARPGLLFEDHLEP
                     LLRAASTSAA"
     gene            complement(4051..>4728)
                     /locus_tag="VHZ56_11780"
     CDS             complement(4051..>4728)
                     /locus_tag="VHZ56_11780"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEX4298692.1"
                     /translation="GGVDLTEVRRLALPQGVAMIFVDPSGENEIAILPGANSETSIAD
                     ADRTIAMARPGDIVVTQQEIPQEATARALALARQKGIVTIVNTAPFLADTAQVVRDAA
                     IVVANETEFALLAGSGPSESVMRNWARDRRQTIIVTLGAEGAWAARAETLIKVPALKV
                     TPIDTVGAGDTFVGYLAAGLDAGLDLEAAMRRAAVAASLACLKPGAQPAIPQAAEVEA
                     ALSSGSR"
BASE COUNT          767 a         1720 c         1476 g          765 t
ORIGIN      
        1 ggcagcggca gcgacggcac cgatgccccc gacatcgacc agtacatcgc cgcccgcccg
       61 accctcgccg agcacctcgg cgtccagatc gggctcttgc tgaccgatcc tgccgaccgg
      121 ctgatcgcgc gctttctcgc cgacggcctc aacgaggcgg gctacctcgt cctcgatctc
      181 gcggcggtcg ccgaacaact cggcgccagc ctctcggccg tcgaggcggt gctggcccgg
      241 ctgcagacgc tcgagccgat cggcatcttc gcccgctcgg tccgcgaatg ccttgccctg
      301 cagctcgccg agcgcgaccg gctcgacccg ctgatgcagc gcctgctcga tcacctcgat
      361 ctcatcgccg gccacgacct cgcggcgctg gcccgcgccg tcggcgccga gcgcgacgac
      421 ctgctggaca tgctggccga actgcgcgcc ctcgatccca agcccggccg tgccttcgag
      481 gctgggccgg tcgaagccgt ggtgcccgat gtcttcgtgc gcgaaggccc gtccggctgg
      541 ctggtagaac tcaattccga tatcctgccg cgcgtgctcg tcaaccgcac ctattacgcg
      601 gcggtgtcgg ccaaggcgcg gaacgcgggg gaaaagagct tcctcgtcga cagcatgcag
      661 accgccaact ggctgaccaa gagcctcgac cagcgcgccc agaccatcct caaggtcgcc
      721 accgagatcg tccgccagca ggaccagttc ctgcaccgcg gcatcgcctt cctgaagccg
      781 atgacgctga agctcgtcgc cgatgccatc gacatgcacg aatcgaccgt cagccgcgtc
      841 accaccagca agtacgtcgc caccccgcgc ggcctgttcg agatgaagta cttcttcacc
      901 accgcgctgg cctcctcgac cggggcggag gagcactccg ccgaggcggt gcgccaccgc
      961 atccgcctgc tcatcgacgc cgagccggcg gccgacatcc tctccgacga caccatcgcc
     1021 gaactgctcg accgcgagca gggaatcgag gtggcgcgac gcaccgtcgc caaataccgc
     1081 gaggcgatga acatcccctc ctcggtgatc cgccggcggc agaaacgggc gctcgtcgcg
     1141 gcccgctaag ccgctgcttc ccgtcggctt tttcggcccc ctgcgcgcaa acgccacgaa
     1201 acccgaaggc cctcatccgc attgctccct cgcacccccg ggtctagtct cggggcaacg
     1261 cgtcgacggc gcttcgcgcc gctggcaacc caacccagag gagtttcatg actctacgcg
     1321 tctcagggaa aaacatggac gtgggcgatg cgctcaggac ccgggcggag ggacatttcg
     1381 acggcgttgt gaagaaatat ttcgatggcg gctacaccgg ccatctgacc ctcgagccgg
     1441 agggttcggg cttcaatgcc ctgtgcctcg tgcatcttga ttcgggcacc atcctgcagg
     1501 ctacggcgta tggcggcgac gccatctcgg cctacgagat cctcaccgag acgatcgaga
     1561 agcggctgcg ccgctacaac cgcaagctca agcagcacca ccatcacgcc agcggcgagg
     1621 gcagcctcga agcgcagggc gacgtgctcc aggcgcccgg cgacagcgac gagctcgccg
     1681 aggattattc gccgccggtc atcgctgaaa caaccaggag cctgaggcag atgagtgtcg
     1741 aggaagcggt catggaactc gatcttacac aggccgaaat ggtcatgttc cggcatgctg
     1801 gacatggggg tctaaacgtg gtctaccgcc gcgccgatgg caatatcggc tggatcgatc
     1861 cggccttgcg ggccaactga gcacagcaag tcagccactc cccccaaaga catctagggt
     1921 ctctttatgg aacttcgcga catcctctct caggagtccg tgctcgtctg cacggacatc
     1981 aagaccaagc gcgacgttct caccaaactc tccgacaagg tcgccgcctt gactggtcag
     2041 ccggccgcgg aaatcttcga agccctcaat gatcgcgaat cgctcggctc gaccgggctg
     2101 ggcaacggca tcgccgtgcc gcacggcaaa tatgcgccgc tgaagggcgt catggcggtg
     2161 ttcatgcggc tgccttcgcc ggtcgatttc gaatcggtcg atgaccagcc cgtcgatatc
     2221 gtgatgatgc tgctggcccc gatgggcgcc ggggccgacc atttgaaggc gctggcccgg
     2281 gtggcgcgcg tcctgcgcac cgattcggtg gccgatgccc tgcggcacag cagcgatccc
     2341 gccacgctct accgcatcct cacccagccg ctcgaatcca ccagggcggc gtgagccgtg
     2401 tcgtcgcgct agtgcagcgc gacgatcccg aaattcttgt cggccagcca gtcctcgacc
     2461 gcctcgtcgc tgtcggccac cagcagcggc gagccgtcgg cgcccaccac catctgaaac
     2521 tcgtcgtcgt cgctgagatc gggctcatcc atcatctcgg agagcttctt gccgttgatc
     2581 gggcgcacat agaccacggc gttgccgccg agcgccatga actgcgccgg ggtcaggtgg
     2641 cgcagcgggt tgtcgaaaat cgcttcttct ggtctgtctt gcatgatgtt cccctttcta
     2701 ggcagaacgg atgtcgatgc ggcggctgag cttcggcgct ctgggccgga cgaccgagat
     2761 gaccagcatg ccgtgttcga gcacggcgtc cttcacctca acgccatcgg ccaacaggaa
     2821 gctccgctgg aactgtcgcg ccgcgatgcc gcggtgcagg aattcccgtc cctgttcgtc
     2881 ttgctgccgg ccacgcacga tgagttgatt gtcttcccag tccacctcga gctcggcatg
     2941 ggcaaagccc gccaccgcga tcgagatcag gaagcgctcg gtgccgtcgg catcgaggct
     3001 gcgttcgatg ttgtagggcg ggtagccgtc tgcggcccgg ctgagccggt cgatgcgttc
     3061 ctcgtaggca tcgaagccca ggaggaacgg cgccgaaaac aacgagacgc gggacactct
     3121 gtccgtcctt gtgcaagcaa cgtcgcccac cggcccaagt ttcagcggca ccggtggacc
     3181 gcccagatat ggggcacaca catatgccct tcaagaccgc ggaaaatgcc cacaaatgcc
     3241 ccctgaaacg gtcgccatcg tcactccggc gttccgcgcc gagcgctgga tcgccgcctg
     3301 cgtccgcagc gtcgtggcgc agacctggcc gcactggcag cattggatcg tcgccgacga
     3361 cggcgccgac tacgaggcgc tgctggccgc cgccgggctg cgcgacccgc ggctgcggtt
     3421 cctcgcctcg ggcaccatcg gcggcggggc gtcgcgggcc cgcaacctcg ccctcgaccg
     3481 catcgaggcc ccctacgtcg ccatcctcga tgccgacgac cgcttcaagc ccgataagct
     3541 ggcgcaggcc gtcgcggcgc tgcagcacca tgccatcgtc tcggtggcgc tcgacgagtt
     3601 cgacgagacc ggccggcggc tgcggctggt ggggcagggg gccgatcgcg agctcgcgcc
     3661 cgccacctac aaatggacct gcctgtcgat ggattcgatg ctcgtctggg accggcggcg
     3721 caccgacgcc cgctacgacc tgacgctcac caacatgacc gacctcgagc tgctgctgca
     3781 gctctgccgc acggcgccgg ccgtctggca tctcggcacg ccgctgcacg actacctcaa
     3841 gcttgccgtc tcgatgagca acggccccgg cgtcaccgac aagatgatcc gctcgaagcg
     3901 cgagatcctg cgccgtctcg aaacgggatt ctacccgatg gccgacgccg ccggtcccgt
     3961 cggcatggcc aagttcctcc gcctgtcgct cagcgccgag gcaagctacc cggccgctgc
     4021 ggcggcccgg cccggactat tgttcgagga tcacctcgag ccgctgctga gggcggcctc
     4081 gacctcggcc gcctgaggga tcgccggctg cgcgccgggc ttgaggcagg cgaggctcgc
     4141 cgccactgcg gcgcgccgca tcgccgcctc gaggtcgagc ccggcatcga ggccggccgc
     4201 cagatagccc acgaacgtgt cgccggcgcc caccgtgtcg atcggcgtca ccttgagcgc
     4261 cggcaccttg atcagcgtct ccgccctcgc ggcccaggcg ccttccgcgc cgagcgtgac
     4321 gatgatcgtc tgccggcgat cccgcgccca gttccgcatc acgctctcgc tgggcccgct
     4381 gcccgccagc agcgcaaatt cagtctcgtt ggcgaccacg atcgccgcgt cccgcaccac
     4441 ctgcgccgtg tcggcgagga atggcgcggt gttgacgatc gtgacgattc ccttctgcct
     4501 cgcgagcgcc agcgcgcggg ccgtcgcctc ctgcgggatc tcctgctgcg tcaccacgat
     4561 gtcgcccggc ctcgccatgg cgatcgtccg gtcggcgtcg gcgatgctcg tctcgctgtt
     4621 ggcgccgggc aggatggcaa tctcgttctc gcccgaggga tcgacgaaga tcattgccac
     4681 gccttgcggc agcgccagcc ggcggacctc ggtgagatcg acgccgcc
//
LOCUS       DATAZA010000468         7590 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_300644, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000468 DATAZA010000000
VERSION     DATAZA010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 7590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7590
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300644"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1429
                     /locus_tag="VHZ56_11785"
     CDS             <1..1429
                     /locus_tag="VHZ56_11785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013214668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016896 - RNA exonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="VacB/RNase II family 3'-5' exoribonuclease"
                     /protein_id="HEX4298693.1"
                     /translation="DAKDHDDAVHAEPDTDPNNPGGHIVIVAIADVAAYVRPGSALDR
                     EAYLRGNSVYFPDRVVPMLPERISNDLCSLKEGEARPSLAVRMIFDAEGRKRRHSFHR
                     VLFRSAARLSYQQVQAAIDGRPDDKTGPLLEPILRPLYAAYAAMAKARDKRGPLDLDL
                     PERKIILDKAGMVADVRTPERLETMRLIEEMMIAANVAAAETLEKHKSALLYRVHDTP
                     SREKLTALRDFLATLDLSFGKSEAVRPADFNRVLAKARDSERTQQVSEMVLRSQAQAE
                     YSAENYGHFGLNLDRYAHFTSPIRRYADLIVHRALIAALDFGKDGLTDDEAAHLPGIA
                     QHISTTERRAMLAERETSDRLLAQFLAGKIGAEFDGRISGVTRSGLFVRLSETGADGF
                     IPASTIGQDYYRFVEEMQAMVGDRTGETFRIGDQVRVRLLEAAPVAGALRFELLSEGG
                     RGKRSSLKHGSKGPSHHYGPKGRRR"
     gene            1439..1864
                     /locus_tag="VHZ56_11790"
     CDS             1439..1864
                     /locus_tag="VHZ56_11790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HEX4298694.1"
                     /translation="MPVSLSTPQQYRSVGRAVWNGMKLRCPHCGKGHLFRSYLKVADR
                     CEVCGEELFHHRADDLPPYLAIVIVGHLIVGVMLELQFHYEIAPWVYMVTAVPAALIL
                     PLLMLPSIKGAVVGLQWANRMHGFGASEPQADPALPTYS"
     gene            1985..2152
                     /gene="rpmG"
                     /locus_tag="VHZ56_11795"
     CDS             1985..2152
                     /gene="rpmG"
                     /locus_tag="VHZ56_11795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010233410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEX4298695.1"
                     /translation="MAKAASIKIKLVSTADTGFYYVTEKNSRTQTEKLSFKKYDPVVR
                     KHVEFKEAKIK"
     gene            complement(2460..3830)
                     /locus_tag="VHZ56_11800"
     CDS             complement(2460..3830)
                     /locus_tag="VHZ56_11800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PleD family two-component system response
                     regulator"
                     /protein_id="HEX4298696.1"
                     /translation="MTARVLIVDDIPTNVRLLEARLTAEYFDVRTASSGRDALAIMAE
                     GQTDIILLDVMMPEIDGFEVCRRLKADRKTAHVPVLMITALDQPSDRVKGLQAGADDF
                     LTKPVDDVQLMARVKSLARLKALTDELRARAQTGQEIAIEDTMRAMDAANADGGRILL
                     VDSDPRSAERIGGYLSAAHRVDVLANPAEAALQVAGGTYELAIVSMALGDFDPLRVCS
                     QMRTLEQTRSLPILLVAEDSDRPRVVRGLDLGVNDFIMRPIERNELAARVRTQIRRHR
                     YAVELRQSVTNTLALAVTDELTGLYNRRYFDRHLSLMLEKAREQERDMALMLIDMDFF
                     KSVNDTHGHDMGDAVLREFAQRLKRNIRGVDLACRFGGEEFVVLMPDTDYRQAQGVAE
                     RVRMAVAERGFETSTMRPLSVTVSVGVALNEHTIDTPEMILKRADVALYRAKREGRNR
                     VVFDAA"
     gene            complement(3884..4258)
                     /locus_tag="VHZ56_11805"
     CDS             complement(3884..4258)
                     /locus_tag="VHZ56_11805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003521498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4298697.1"
                     /translation="MPKTVMIVEDNELNMKLFNDLLESRGYSIIQTRNGMEAIGLARA
                     HHPDLILMDIQLPEVSGLVVTKWLKEDDDLQSIPVIAVTAFAMKGDEERILQGGCEGY
                     ISKPISVPHFLETIARYIGPAN"
     gene            4351..4629
                     /locus_tag="VHZ56_11810"
     CDS             4351..4629
                     /locus_tag="VHZ56_11810"
                     /inference="COORDINATES: protein motif:HMM:NF023518.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3572 family protein"
                     /protein_id="HEX4298698.1"
                     /translation="MPLKTSLPTLQELADLCLQHLVQNPDQLAEFMVQSGLEPKRLRG
                     LVGTDGFAHGLVDYVASNEPLLLAVAAEARLAPETIMQAWARIHQAEQ"
     gene            4634..5953
                     /locus_tag="VHZ56_11815"
     CDS             4634..5953
                     /locus_tag="VHZ56_11815"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009469338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEX4298699.1"
                     /translation="MPDPRILCRDCGWVAEAAEALRRCPDCGSPRLVAHAELGALSIA
                     HVDCDAFYASIEKRDDPSLKDKPLIIGGGVRGVVSTCCYIARQYGVRSAMPMFTARKL
                     CPEAVIVRPDMQKYVGVSRQVRALMDRLTPLVEPLSIDEAFLDLGGTAALHRASPAEV
                     LARFARDVEAELGITISVGLSHNKFLAKVASDLDKPRGFAVIGRAETTSFLAGQPVDL
                     IYGVGKVFAETLRRDGVETIGQLQETPPEDLIRRYGETGARLARLSRGDDSRPVSTDG
                     EMKTISSETTFNTDLAGFEELSTELLALSERLSERLKAKAVVGDTVTLKLKSAGFRLR
                     TRARHLMIPTQLSNVLYETGSQLLAREIDGTAFRLIGIGLSGLTAADGRDPTDLVEPA
                     IARKAAAERAMDRVRTRFGREAVVRGKLYGRRKPRPSEDKVEEGENK"
     gene            5950..6414
                     /locus_tag="VHZ56_11820"
     CDS             5950..6414
                     /locus_tag="VHZ56_11820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007875216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX4298700.1"
                     /translation="MTTPIEKLREYGYELPRPKPPVASYIPTTRTGNILYVSGQISSN
                     DAGVMTGLLGDTMNVVQGGNAAEVAALNVLAQIVYSAGVELTQIKRVLKLTVLVASTS
                     DFHEQHLVANGASNLIVGVLGDIGKHARAAFGVASLPLGAAVEVEAVVEVNG"
     gene            6436..7188
                     /locus_tag="VHZ56_11825"
     CDS             6436..7188
                     /locus_tag="VHZ56_11825"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HEX4298701.1"
                     /translation="MALFDRPIAHRGLHDHARGVIENSRSAFEAALAAGYGIECDVQL
                     ASDGVPFMFHDDDFDRVTTARGRSDAQPIGVVQKLVLTGSASADVPQRFDEFLAQVGG
                     RTQLQIELKQQANPEKTRALAAAVAASLRGYRGPYTLESFDPYLLAALRREGVRAPLG
                     IITYGYDEPEWDSKLPAGTKFVLRHLLHWPWTRFDFISCRNVSLYLPMVRFLRARGMP
                     VTAWTITSPQAAEAARRGADQIVFEGFLPAIG"
     gene            7181..>7590
                     /locus_tag="VHZ56_11830"
     CDS             7181..>7590
                     /locus_tag="VHZ56_11830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018239613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidogalycan biosysnthesis protein"
                     /protein_id="HEX4298702.1"
                     /translation="MAETLTATIVDATGKVDAATWNRLAAASDPRGNPFLDHAFFLAL
                     EESGSATRRTGWQPRHVVLADREHIVGLLPMFEKSHSQGEYVFDHGWANAFEQAGGRY
                     YPKLQCAVPFTPVTAPKLLTARDDPAVKRALLTAA"
BASE COUNT         1288 a         2539 c         2535 g         1228 t
ORIGIN      
        1 cgacgccaag gaccatgacg acgcggtcca cgccgagccg gacaccgatc cgaacaaccc
       61 gggcggccac atcgtcatcg tcgccatcgc cgatgtcgcc gcctatgtgc ggccgggctc
      121 ggcgctcgac cgcgaggcgt acctgcgcgg caactcggtg tatttccccg accgggtggt
      181 gccgatgctg ccggagcgca tctccaacga cctttgctcg ctgaaggaag gcgaggcgcg
      241 gccgtcgctg gcggtgcgga tgatctttga cgccgagggc cgcaagcggc gccacagttt
      301 tcaccgcgtg ctgttccgct cggccgccag gctcagctac cagcaggtgc aggcagcgat
      361 cgacggccgc ccggacgaca agaccgggcc gctgctcgag ccgatcctca ggccgctgta
      421 cgccgcgtat gcggcaatgg ccaaggcgcg cgacaagcgc ggtccgctcg acctcgatct
      481 gcccgagcga aagatcatcc tcgacaaggc gggcatggtc gccgacgtgc ggacaccgga
      541 acggctcgag acaatgcggc tcatcgagga gatgatgatc gcggccaatg tcgcggccgc
      601 tgaaacgctg gagaagcaca agagcgccct gctctaccgc gtccacgata cgccgagccg
      661 cgagaagctg acggcgctgc gcgattttct cgcgaccctc gacctgagct tcggcaagtc
      721 cgaggcggtg cgtccggcgg atttcaatcg cgtgctggcc aaggcgcgcg acagcgagcg
      781 gacgcagcag gtgtccgaga tggtgctgcg ctcgcaggcg caggccgaat attcggctga
      841 gaactatggg catttcggcc tcaacctcga ccgctacgcg cacttcacct cgccgatccg
      901 ccgctacgcc gacctgatcg tgcaccgggc gctgatcgcg gcgctggact tcggcaagga
      961 cgggctgacc gacgacgagg ccgcccacct gcccggcatc gcccagcaca tctcgaccac
     1021 cgagcggcgc gccatgctgg ccgagcgcga gacctccgac cggctgctgg cgcagttcct
     1081 tgccggcaag atcggggccg agttcgatgg ccggatttcg ggcgtcacgc gctcgggcct
     1141 gttcgtgcgc ctcagcgaga ccggcgccga cggcttcatt ccggcgtcga cgatcgggca
     1201 ggactactac cgcttcgtcg aagagatgca ggcgatggtt ggcgaccgca ccggcgaaac
     1261 cttccgcatc ggcgaccagg tccgggtccg cctgctggag gccgcgccgg tcgccggtgc
     1321 cctgcgtttc gagcttctca gcgagggtgg ccgcggcaaa cggtcatctt tgaagcacgg
     1381 cagcaaaggg ccatctcacc attacggccc caagggccga agaaggtagt cgggtccaat
     1441 gcctgtttcc ctcagcactc cccagcaata tcgcagcgtc ggccgcgccg tctggaacgg
     1501 catgaagctg cgctgcccgc attgcggcaa agggcatctg ttcaggagct atctcaaggt
     1561 cgcggatcgg tgcgaggtct gcggcgaaga gctgttccat caccgggcgg acgacctgcc
     1621 gccgtatctg gcgatcgtca tcgtcgggca cctgatcgtg ggcgtgatgc tcgagctgca
     1681 gttccactac gagatcgcgc cgtgggtcta tatggtgacc gcggtgccgg cggcactcat
     1741 cctgccgctg ctcatgctgc cctcgatcaa gggcgcggtg gtggggctgc aatgggccaa
     1801 ccgcatgcac ggcttcgggg cgtccgagcc gcaggccgat ccggcgctgc cgacctattc
     1861 ctgagccccg gtggccgggg gttcggatcc ctcgggcagc gcagcttgac aagcggcggc
     1921 aaatccttag tttgcgcgca aatttgaggc tggcctgcgg gcggccgttg caaggattct
     1981 tcccatggcc aaagccgctt cgatcaagat caagctcgtg tccaccgccg acaccggttt
     2041 ctactatgtc accgagaaga actcgcgcac ccagaccgag aagctgagct tcaagaagta
     2101 cgacccggtg gtgcgcaagc acgtcgagtt caaggaagcc aagatcaagt aattccggcg
     2161 ctttgccgaa acggaaaacc ccgcgccgag gcgcggggtt tttgttttgt gcatgggagc
     2221 cgctgtgagg cagtggccgg tccggagggg gtgactttgg ggccacacgc gacctccgga
     2281 ccagccgccc tacggactca ggagttgcgg cggacctgag gtgaaccgta ggggtctagg
     2341 ggggatgagg ctgcacctca tctccgttgc ccaaccctta gcgcgcggcc ggtcgaacac
     2401 aaccgaagcc actgatcgta atgaaggatt aaccttactc ggcaggccgt ccggcggccc
     2461 taggcggcgt cgaaaacgac ccggttgcga ccttcgcgct tggcccggta aagcgccacg
     2521 tcggcccgct tgaggatcat ctcgggggta tcgatggtgt gctcgttgag ggccacgcct
     2581 accgacacgg tgacgctcag cggccgcatc gtcgaggtct cgaagccccg ctccgccacc
     2641 gccatgcgca cccgctcggc gacgccctgc gcctggcggt agtcggtgtc gggcatcagc
     2701 accacgaact cctcgccgcc aaaacggcag gcgagatcga cgccgcggat gttgcgcttc
     2761 aggcgctgcg caaactcgcg gagcacggcg tcgcccatgt cgtgaccgtg ggtgtcattg
     2821 accgatttga aaaaatccat atcgatcagc atgagcgcca tgtcgcgctc ctgctcgcgg
     2881 gccttttcca gcatcagcga caggtggcgg tcgaaatagc ggcggttgta gagcccggtg
     2941 agctcatccg tcaccgccag cgccagcgtg ttggtgacgc tctggcgcag ctcgacggca
     3001 tagcggtggc gccggatctg ggtgcggacg cgcgcagcaa gctcgttgcg ctcgatcggt
     3061 cgcatgatga aatcgttgac gccgaggtcg agcccacgca ccacccgcgg acggtcgctg
     3121 tcctcggcga ccagcaggat gggcaggctg cgggtctgct cgagcgtgcg catctgcgaa
     3181 cagacccgga gcggatcgaa atcgccgagc gccatcgaga cgatggcgag ctcataggtg
     3241 cccccggcga cctgcagcgc cgcttcggcg ggattggcga gcacgtcgac gcgatgggcg
     3301 gccgacaggt agccgccgat ccgctcggca ctgcgcggat cgctgtcgac caggaggatg
     3361 cggccgccat cggcgttggc cgcgtccatg gcgcgcatgg tgtcctcgat ggcgatttcc
     3421 tgtccggtct gggcccgcgc ccgcagttcg tcggtcaggg ccttgagccg cgccaggctc
     3481 ttgacgcggg ccatcagctg gacgtcgtcg acgggcttgg tgaggaaatc gtcggccccc
     3541 gcctggaggc ccttcacgcg gtccgatggc tggtcgaggg ccgtgatcat caagaccggc
     3601 acgtgcgcag tcttgcggtc ggccttcagc cgccggcaga cttcgaagcc gtcgatttcg
     3661 ggcatcatca cgtcgagcag gatgatgtcg gtctggccct cggccatgat ggcgagcgcg
     3721 tcgcgaccgg acgatgccgt ccggacgtcg aagtattccg ccgtcaggcg ggcctcgagc
     3781 agccgcacat tggtcggaat atcgtcaacg atcagcacgc gagctgtcaa agaccggccg
     3841 cccctcgacg caaaacaacc tgggaaaagg gagcgcgagg cccctagttg gccggcccaa
     3901 tgtagcgggc aatcgtttcc aaaaagtgtg gcacggagat gggtttggag atgtacccct
     3961 cgcagccgcc ctgcaggatg cgctcctcgt cgcccttcat ggcgaaggcg gtcacggcaa
     4021 tcaccgggat cgactgcaga tcgtcgtctt ccttcagcca tttggtgacg accagccccg
     4081 agacctcggg caactggatg tccatcagga tgaggtccgg atgatgcgcc cgggcgagcc
     4141 cgatcgcctc catgccgttg cgggtctgga tgatcgaata gccgcgggac tccagcagat
     4201 cgttgaagag cttcatgttg agctcgttgt cttcgacgat catgacggtc ttgggcatga
     4261 aatccggctt ccgccttgcg ggcactgtgt tctgcccgaa ggctccgcta acatcaacac
     4321 gcttacgaaa cccgtaacgg acgcgttccc gtgccgctca agacatcgtt gcccaccctc
     4381 caggaactgg ccgatctctg cctccagcat ctggtccaga accccgacca actggctgag
     4441 ttcatggtac aatccggcct cgagccgaaa cgcctccgcg gcctcgtcgg caccgatggc
     4501 ttcgctcacg ggctggtgga ctacgtcgca tcgaacgagc cgctgctgct cgccgtcgcg
     4561 gccgaggcga gactcgcgcc ggagacgatc atgcaggcgt gggcccgcat ccaccaggcg
     4621 gagcaatgag tcggtgcccg atccacgcat cctttgccgg gactgcggct gggtggcgga
     4681 agcggccgag gcgctccggc gctgcccgga ctgcggatcg ccgcgccttg tcgcccacgc
     4741 cgaactcggc gcgctcagca ttgcgcatgt cgactgcgac gcgttctacg cctcgatcga
     4801 aaagcgcgac gaccccagcc tgaaggacaa gccgctgatc atcggcggcg gcgttcgcgg
     4861 cgtggtctcg acctgctgct acatcgcccg gcagtatggc gtgcgctcgg cgatgccgat
     4921 gttcacagcg aggaaactct gcccggaggc ggtgatcgta cggccggaca tgcagaaata
     4981 cgtcggcgtc agccggcagg tccgagccct catggacagg ctcacgccac tggtcgagcc
     5041 gctgtcgatc gacgaggcct tcctcgacct cggcggcacg gcggccctgc accgggcttc
     5101 gccggccgag gtgctggcgc ggtttgcccg cgacgtggaa gccgaactgg gcatcaccat
     5161 ctcggtcggg ctcagccaca acaagttcct cgccaaggtg gcgtcggacc tcgacaagcc
     5221 acgtggcttt gccgtcatcg gccgggccga gaccaccagc ttcctcgccg ggcagccggt
     5281 ggacctcatc tacggcgtcg gcaaggtgtt cgccgaaacc ctgcggcgcg acggcgtcga
     5341 gaccatcggc cagctgcagg agacgccgcc cgaggacctg atccgccgct atggcgagac
     5401 cggcgcgcgg ctggcgcggc tcagccgcgg cgacgacagc cggccggtca gcaccgacgg
     5461 cgaaatgaag acgatctcct cggagaccac cttcaacacc gatctggcgg ggttcgagga
     5521 gctgtcgacc gagctcctgg cgctgagcga acggctcagc gagcggctca aggccaaggc
     5581 agtggtcggc gataccgtga cgctcaagct caaatcggcc ggattccggt tgcgcacgcg
     5641 ggcccggcat ctgatgatcc cgacgcagtt gtccaacgtg ctctatgaga ccggcagcca
     5701 gttgctcgcg cgcgagatcg acggtacggc attccggctg atcggcatcg gcctgtcggg
     5761 cctgacggcc gccgacggac gcgatccgac ggacctggtc gaacccgcaa tcgcgcgcaa
     5821 ggcagccgcg gaacgtgcta tggaccgggt gcggacccgg ttcggccgcg aggccgtggt
     5881 ccgcggcaaa ctttacggcc ggcgcaagcc gagacccagc gaagacaaag tcgaagaagg
     5941 cgaaaacaaa tgacgacccc gatcgagaag ctgcgtgagt atggctacga gctgccgcgg
     6001 ccgaagcccc cggtggcgag ctacatcccc acgacccgca cgggcaacat cctctacgtc
     6061 tcgggccaga tctcctcgaa cgatgccggg gtgatgaccg ggctgctcgg cgacaccatg
     6121 aacgttgtcc agggcggcaa cgcggccgag gtcgcggcgc tcaacgtgct cgcgcagatc
     6181 gtctattcgg cgggcgtcga gctgacccag atcaagcggg tgctgaagct gacggtactg
     6241 gtcgcctcga cctccgattt ccacgagcag cacctcgtcg ccaacggcgc ctccaacctc
     6301 atcgtcggcg tcctcggcga catcggcaag cacgcgcgcg cggcgttcgg ggtggcctcg
     6361 ctgccgctcg gcgccgccgt cgaagtcgag gcagtcgtcg aggtcaacgg ctgagccgcc
     6421 ggcagcgcgc cgtccatggc cctcttcgac cgccccatcg cgcaccgcgg gctgcatgac
     6481 cacgcccgtg gcgtcatcga gaattcgcga tcggcattcg aggcggcgct ggcggccggc
     6541 tacggtatcg aatgcgacgt gcagctggcc agcgacggcg tgccgttcat gttccacgac
     6601 gacgacttcg accgcgtgac gacggcgcga ggccggtccg acgcgcagcc gatcggcgtc
     6661 gtgcagaagc tcgttctaac cggcagcgcc agcgccgacg tgccgcagcg gttcgacgag
     6721 ttcctggcgc aggtcggcgg gcggacgcag ctgcagatcg agctcaagca acaggcgaac
     6781 ccggagaaga cgcgggccct cgctgccgcg gttgccgcct cgctgcgcgg ctatcgcgga
     6841 ccctacacgc tcgagtcgtt cgatccttac ctgctggcgg cgctgcgccg cgagggggtg
     6901 cgggcaccgc ttggcatcat cacctatggc tacgacgagc cagaatggga ctccaagctg
     6961 ccggctggaa ccaagttcgt gctgcgccac ctgctgcact ggccgtggac gcgcttcgat
     7021 ttcatttcct gccgcaatgt gtcgctgtac ctgccgatgg tgaggtttct gcgggcccgc
     7081 ggcatgccgg tgacggcgtg gacgatcacc tcgccgcaag ccgcagaggc ggcaaggcgc
     7141 ggtgccgacc agatcgtgtt cgaggggttc ctgccggcaa ttggctgaga cactcacagc
     7201 gacgatcgtc gatgcgaccg gcaaggtcga tgccgcgacg tggaaccggc tggccgctgc
     7261 ctcggacccg cgcggcaacc cgtttctcga tcacgccttc ttcctcgcgc tcgaggagtc
     7321 cggctcggcg acccgccgca ccggctggca gccgcggcac gtggtcctcg ccgatcgcga
     7381 acatatcgtc ggcctgctgc cgatgttcga gaagtcgcat tcgcagggcg agtacgtctt
     7441 cgatcacggc tgggccaatg ccttcgagca ggccgggggc cgctactatc cgaagctcca
     7501 atgcgccgta ccgttcacgc cggtgacggc gcccaagctg ctgacggcgc gggacgatcc
     7561 ggccgtgaag cgggcgctgc tgaccgcggc
//
LOCUS       DATAZA010000469         1538 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2157846, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000469 DATAZA010000000
VERSION     DATAZA010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2157846"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..624
                     /locus_tag="VHZ56_11835"
     CDS             <1..624
                     /locus_tag="VHZ56_11835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEX4298703.1"
                     /translation="PMEEVLIDVDEPYTGAVVEKISRRKGELADMRPSGGGKVRLTFN
                     MPSRGLIGYHGEFLTDTRGTGVMNRLFAGYGPWKGPLEGRRNGSLISTEGGEAVHYAL
                     FYIQERGTLFVNPGDKVYVGLILGEHARGSDLEVNPIKEKKLTNIRAAGKDDAMLLTP
                     PRRMSLEQAIAYIEDDELVEVTPQSIRIRKKALSPHDRKRSSRTETV"
     gene            complement(781..915)
                     /locus_tag="VHZ56_11840"
                     /pseudo
     CDS             complement(781..915)
                     /locus_tag="VHZ56_11840"
                     /inference="COORDINATES: protein motif:HMM:NF026918.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Imm53 family immunity protein"
     gene            complement(912..>1538)
                     /locus_tag="VHZ56_11845"
     CDS             complement(912..>1538)
                     /locus_tag="VHZ56_11845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX4298704.1"
                     /translation="GEMLAGLVNNAGIAVAGPLLYLKLDEFRQQIAVNLTGQLIVTQA
                     FAPLLGADRSRAGKPGRIVMISSVGGKNANPFMGPYCASKFGLEGMSEALRRELMIFG
                     IDVIVVAPGAVATPIWDKADSVDPNIYANTPYLKSLTAVKSYMLELGRKGLPPEALGE
                     AVWSALTVAKPAVRYTVTPDAFQNFLMNALPKRMVDRMIAGRLGLTKP"
BASE COUNT          274 a          520 c          499 g          245 t
ORIGIN      
        1 ccgatggagg aggtactgat cgacgtcgat gagccctaca ccggcgcggt ggtggagaag
       61 atcagccgcc gcaagggcga gctcgccgac atgcgcccat cgggcggtgg caaggtgcgg
      121 ctgaccttca acatgccgag ccgtggcctg atcggctatc acggcgagtt cctcaccgac
      181 acgcgcggca cgggcgtgat gaaccggcta ttcgccggtt acggtccgtg gaaggggccg
      241 ctggagggcc ggcggaacgg ctcgctgatc tccaccgaag gcggcgaggc ggtgcattac
      301 gcgctgttct acatccagga acgcggcacg ctgttcgtca atccgggcga caaggtctat
      361 gtcggcctga tccttggcga gcacgcgcgc gggtcggacc tcgaagtgaa cccgatcaag
      421 gaaaagaagc tgaccaacat ccgcgccgcc ggcaaggacg acgcgatgct gctgacgccg
      481 ccgcgccgga tgagcctgga gcaggcgatc gcctatatcg aggacgacga gctggtcgag
      541 gtcacgcccc agtcgatccg catccgcaaa aaggcgctga gcccccacga ccgcaagcgc
      601 agctcgcgga ccgagacggt ctaagccgcc tcgacccagg cccggaagat cgtcaggatc
      661 tccgtcaggt tctgcggtcc gccggcgcct tcgaacttgc cgtcctgaac gcggcagata
      721 accccagtcg tgctcggacc gctcgatatg caccggcgcg aacggcacgt ccgcgagatc
      781 ggtctcgtcg atggcgaagc ggatcgacca gccgggattg tccagcgtgt cgatcttgaa
      841 gccggactgg tgctcccacg tgccgtcgca ttgcgagcgg taatagcgct gcagccagtc
      901 cagcaggtcg ttcacggctt tgtcagcccc agccgtcccg cgatcatccg gtcgaccatg
      961 cgcttgggca gcgcgttcat caggaagttc tggaacgcgt ccggcgtcac cgtgtagcgc
     1021 acggcgggct ttgcgaccgt cagcgcgctc cacaccgcct cgcccagcgc ctcgggcggc
     1081 aggcccttgc ggcccagttc gagcatatac gacttcaccg ccgtcagcga cttcagatac
     1141 ggcgtgttgg cgtagatgtt cggatcgacg ctgtcggcct tgtcccagat cggcgtcgcc
     1201 accgcgccgg gcgccaccac gatcacatcg atgccgaaga tcatcagctc gcggcgcagc
     1261 gcctcgctca tgccttcgag cccgaacttg gacgcgcaat agggccccat gaacggattg
     1321 gcgttcttgc cgccgaccga cgagatcatc acgatccgcc ccggcttgcc ggcgcgcgag
     1381 cggtcggcac cgagcagcgg cgcgaaggcc tgcgtgacga tcagctgtcc cgtcaggttc
     1441 accgcgatct gctggcggaa ttcgtcgagc ttcagataga gcaagggccc ggccaccgcg
     1501 atgccggcat tgttcaccag acccgccagc atctcgcc
//
LOCUS       DATAZA010000470         1623 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3089351, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000470 DATAZA010000000
VERSION     DATAZA010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3089351"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..523
                     /locus_tag="VHZ56_11850"
     CDS             <1..523
                     /locus_tag="VHZ56_11850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012778788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEX4298705.1"
                     /translation="MADHNRYSVDARAAGRMVLVRSHAERIVVLFNDAVVADHPRQFR
                     RDQIIYDPWHYLPVLVKKPGALRNGAPFKDWDLPPALAQVRAKLKSHADGDRQFVKVL
                     SAVLDHGLDAVEAACAEALAAGIASGDVILTVLARQRQPAAAPSITTPDALRLKIEPM
                     ADCGRYDRIRKVA"
     gene            523..1251
                     /gene="istB"
                     /locus_tag="VHZ56_11855"
     CDS             523..1251
                     /gene="istB"
                     /locus_tag="VHZ56_11855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011540744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HEX4298706.1"
                     /translation="MERHEIIEAMTELKLYGMRASFDEIAGKGLARRDELYPLIASLL
                     RAERTHRQARSISYRIGGAKFPVLKDLDTFVFAETPVDEGQVRELATGAFLDAKRNTI
                     FIGGTGTGKTHLCIAVASAIIRARARGRFFNLVDLVNQLEQEKAAGRSGRLAENLLRY
                     DLIVIDELGYLPFSQAGGQLLFHLISKLYENTSLLITTNLAFADWPQVFGDAKMTTAL
                     LDRLTHHCDIVETGNDSWRFKNRT"
     gene            1412..>1623
                     /locus_tag="VHZ56_11860"
     CDS             1412..>1623
                     /locus_tag="VHZ56_11860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298707.1"
                     /translation="MGVAVGSDLTRHRAREEALRNGDVKAFKELITEVLDERAARRAA
                     APKTSSDEARRPGLAEPEPTQRDILK"
BASE COUNT          319 a          555 c          487 g          262 t
ORIGIN      
        1 catggccgat cacaatcgct acagcgtcga tgcgcgagcc gccggccgga tggtgctggt
       61 gcgctcccac gccgagcgca tcgtcgttct gttcaacgac gcggtggtgg ccgatcaccc
      121 ccgtcagttc cgccgcgatc agatcatcta cgatccctgg cactatctgc cggtcctggt
      181 gaagaagccg ggcgccttgc gcaatggcgc tccgtttaag gattgggacc tgccgccggc
      241 cttggcccag gtgcgcgcca agctgaagag ccacgccgac ggcgatcgcc aattcgtcaa
      301 agtgctgagc gcggtgctcg accatgggct ggatgcggtc gaggccgcct gcgccgaagc
      361 gctcgcggcc ggcatcgcca gtggcgacgt gattctgact gtgctggcgc gtcagcggca
      421 gccggcggcc gcgcccagca tcaccacgcc cgacgcgctg cgcctgaaga tcgaacccat
      481 ggccgattgc gggcgctacg acaggatcag aaaggtcgcc tgatggaacg tcacgagatc
      541 atcgaggcca tgaccgaact gaaactctac ggcatgcgcg ccagcttcga cgagatcgcc
      601 ggcaaggggc tcgctcgacg cgacgagctc tatcccctca ttgccagcct gctgcgggcc
      661 gagcgcaccc accggcaggc ccggtcgatc agctatcgca tcggcggggc caagttccca
      721 gtccttaaag acctcgacac attcgtcttc gccgagacgc cggtcgacga gggccaagtg
      781 cgcgagctcg ccaccggcgc cttcctcgac gccaagcgca atacgatctt catcggcggc
      841 accggcaccg gcaaaaccca tctctgcata gcggtcgcct cggccatcat ccgcgcccgc
      901 gccagggggc gcttcttcaa cctggtcgat ctggtcaatc agctcgaaca ggagaaggcc
      961 gccggtcgca gtggccggct cgccgagaac ctgctgcgct acgatctcat cgtcatcgac
     1021 gaactcggct atctgccgtt cagccaggcc ggcggacagt tgctgttcca cctgatcagc
     1081 aagctctacg aaaacacctc gctgctgatc acaaccaatc tcgccttcgc cgattggccc
     1141 caagtgttcg gcgacgccaa gatgaccacc gcgctgctcg accgcctgac acaccactgc
     1201 gacatcgtcg agaccggcaa cgatagctgg cgattcaaaa accgcacctg aaccgctgtg
     1261 ccaccccggc ttgccccggt gggcaaacag gcacctcccg cgctgcgctc cgtcggactc
     1321 gtggcggtca ctccgctccg cgcgggtccc tcctgttcgc taccgggaca agcctgaacc
     1381 aaccccagag ggggtcgcga ttgaacgcga aatgggggtc gcagttggaa gcgatttgac
     1441 aagacaccgc gcgcgcgaag aggcacttcg caacggcgac gtgaaagcgt ttaaagaatt
     1501 aatcacagaa gttttagatg agcgtgccgc ccggcgtgca gcagctccta aaacatcaag
     1561 cgatgaggca cgcagaccgg gactggcgga gcctgaaccg acgcagcgcg atatactgaa
     1621 att
//
LOCUS       DATAZA010000471         1776 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2622941, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000471 DATAZA010000000
VERSION     DATAZA010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1776
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2622941"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(440..513)
                     /locus_tag="VHZ56_11865"
     tRNA            complement(440..513)
                     /locus_tag="VHZ56_11865"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(479..481),aa:Cys,seq:gca)
     gene            668..>1776
                     /locus_tag="VHZ56_11870"
     CDS             668..>1776
                     /locus_tag="VHZ56_11870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042925 - benzoate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0042919 - benzoate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoate/H(+) symporter BenE family transporter"
                     /protein_id="HEX4298708.1"
                     /translation="MATADADLPRRGAADLTQPVLAGILAALVGYASTFALVLSGLGQ
                     AGATPVQAASGLFAMSLALGLLNAAIAWRTRMPLSIAWSTPGAAFLTTLQPVEGGFAA
                     VCGAFIVTAALIVASGIVRPLSRAVAAIPAPVAAAMLAGVLLSLCLAPLRALGTLPWL
                     TLPMLVAWIVGLKFARRYAVPLAVAATALTLGLSANLPAGAVSASWPALSFVAPVFTL
                     DALVKIALPLFVITMASQNLTGLAVMRANGFDVAAGPPFVATGIASGLVALFGGLTIN
                     LAAITAALAAGPEAHPDPARRWVAAFAAGIVYLALGLAATLAAAFIAASPPILIEAVA
                     GLALLPSLASALAGSLAAEDSRLPAVATFATTASGL"
BASE COUNT          205 a          686 c          584 g          301 t
ORIGIN      
        1 gcctcgccga gctcggagcg ctcgaggatg cgcacggcca gcgcaaacgg cagcttgccg
       61 atccggcgcg ccgcctcctg cgggctctcg cgattgagga tttcgacggc gtcggccgaa
      121 ttcagccggc tgagctcggc aatttcggcc gcggtctcgg attcataggt catcttggct
      181 cgctttccgc cgatccgccg ttcggcgaag gcgagccgat caggaggtca gctcacgccc
      241 gcgaacggca tcgacgatcg actgggactg tcgcttggca tggggttcgt agctccggga
      301 aaagccgcgg gacacgcccg ctgcctgcgg ctgaaatgag cttccggcgc ggcgccgtca
      361 acgcccggga cggcccgccc catgcgacaa agtcgctctc gcccgccgcc aggaagtcgc
      421 cgattttcag cgaaaggaat ggaggccacg tccggaatcg aaccggaata cacggatttg
      481 caatccgctg cgtaaccact ccgccacgtg gcctcgacga gccgggttct tatggcaggg
      541 caggtctttc cgcaaggtta tcgccgctgc acggggtccg gccggaggca tggcggaggc
      601 accgcggcct gggctagtct ggcgccaatt gatggccggc cgtcgtgccg ctccgtggga
      661 ccgaccgatg gcgaccgccg atgccgacct gccgcgccgc ggcgccgccg acctcaccca
      721 gccggtgctc gccggcatcc tcgccgcgct cgtcggctat gccagcacct ttgctctggt
      781 gctgagcggc ctcggccagg ccggcgcgac cccggtccag gcggcatcgg ggctgttcgc
      841 catgagcctg gcgctcggcc tgctcaatgc cgcgatcgcc tggcgcaccc gcatgccgct
      901 gagcatcgcc tggtcgacgc cgggggcggc gtttctcacc accctgcagc cagtcgaggg
      961 tggcttcgcc gcggtctgtg gcgccttcat cgtgacggcg gcgctgatcg tcgcgtctgg
     1021 catcgtgcgg ccgctgtccc gcgccgttgc cgccatcccg gcgcccgtcg cggccgccat
     1081 gctggccggc gtgctgctga gcctctgcct cgcccccctc agggcgctgg ggaccctgcc
     1141 ctggcttacg ctaccgatgc tggtcgcctg gatcgtcggc ctcaaattcg cccggcgcta
     1201 cgccgtgccg ctcgccgtgg ccgccaccgc cctcaccctc gggctcagcg ccaatctgcc
     1261 ggcgggcgcc gtctcggcct catggccggc gctgagtttc gttgccccgg tgttcaccct
     1321 cgatgcgctg gtcaagatcg cgctgccgct cttcgtcatc accatggcgt cgcagaatct
     1381 caccggcctt gcggtgatgc gcgccaacgg cttcgatgtc gcggccggcc cgcccttcgt
     1441 cgccaccggc atcgccagcg gcctcgtcgc gctgttcggc ggcctcacca tcaatctggc
     1501 cgccatcacc gcggcgctcg cggccggccc cgaggcgcac cccgatcccg cccgtcgctg
     1561 ggtcgcggcc ttcgccgccg gcatcgtcta tcttgccctc ggcctggcgg cgacgctcgc
     1621 ggcggcgttc attgccgcct cgccgccgat cctcatcgag gcagtggccg gcctggcgct
     1681 gctgccgagc ctcgcatcgg cgctcgcggg ctccctcgcc gccgaggact cgcggctgcc
     1741 cgctgtcgcc accttcgcca ccaccgcctc cggcct
//
LOCUS       DATAZA010000472         2447 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3900060, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000472 DATAZA010000000
VERSION     DATAZA010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2447
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3900060"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..1537
                     /locus_tag="VHZ56_11875"
     CDS             59..1537
                     /locus_tag="VHZ56_11875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007199575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4298709.1"
                     /translation="MRKSLILLAIAGVLLSGTAYAAPRTDLNVALQLEPPSLDPTTGG
                     AAAAIREVTYVNIYEGLTRIEEDGSVVPLLAKSWDISPDGLSYTFHLQTGVKFHDGTP
                     LTADDVKYSLDTARGPKSVNAQKQLFANIGAVDVVDPATVKVTLTKPQGDFLYDMGWG
                     DAVIVSPKTAATDGTNPIGTGPFKFVDWVKGDHIDLAKNADYWGTPAKLDKATFKFIS
                     DPTAATSSLLAGDVDVNPEFPAPDALDQFKNDPRFVVEIGNTQGETVLSMNDGKPPLD
                     NVKVREAIAHAIDRKAIIDGAMFGYGTPIGSFFPPSDPAYIDLTSISNFDPDKSKQLL
                     SDAGIKDLDLSLKLPPASYARAAGPIIQQELANVGIKVDITNVEWADWLQNVFTNKDF
                     DLTIISHVEPNDFGVFARDDYYFNYHSDAYKKIIADLNNTTDPAKQTELKQEAQKTLA
                     NDFAAGFLFEYPNIVVANKDVQGIWKNAPIPAVDLTQVSWAQ"
     gene            1602..>2447
                     /locus_tag="VHZ56_11880"
     CDS             1602..>2447
                     /locus_tag="VHZ56_11880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007199576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4298710.1"
                     /translation="MTRYLIGRVASLIVSLIVASVVIFLILSVVPGDPAQFMLGLNAR
                     PDTLAALRDQLGLNGPPLEQYFSWVLGMLHGDLGVSYTYRVPVSELVLQRLGVSLPLA
                     LYALALTIVIAFPAGIFAASRRNSKADVAVMGVTQFGVAVPNFWFAMLLVLVFAIILR
                     WFHAGGFAGWNQGFWQGVQGLTLPAIALALPQASILARVMRSSLLDTLDEDYVRTARA
                     HGLSKAQTLWRHAVRNALIPVLTIVGLQFAFLLAGGIIIENVFFLPGLGRLVFQGITQ
                     RDLIVV"
BASE COUNT          433 a          812 c          774 g          428 t
ORIGIN      
        1 aaatctgtcc tagcattccg gcaaggccgg ttcagtcggc cgccacggaa ggacgctcat
       61 gcgcaaatca ctgatcctgc tggccatcgc cggcgtattg ctgtcgggca cggcctatgc
      121 cgcgccgcgc accgacctca acgtcgccct ccagctcgag ccgcccagcc tcgatccgac
      181 gacgggcggg gccgccgcgg cgatccgcga ggtgacctat gtcaacatct acgaggggct
      241 gacgcggatc gaagaagatg ggtccgtcgt gccgctgctc gccaagtcct gggacatctc
      301 gccggacggc ctgagctaca cgtttcattt gcagaccggg gtgaagttcc acgacggcac
      361 gccgctgacg gcggacgacg tgaaatactc cctcgacacc gcacgcgggc cgaaatcggt
      421 caatgcgcaa aagcagctgt tcgccaacat cggcgcggtc gacgtggtcg atccggccac
      481 ggtgaaagtg accctgacca agccgcaggg cgatttcctc tacgacatgg gctggggcga
      541 cgccgtaatc gtgtcgccga agacggccgc gaccgacggc accaacccga tcggcacggg
      601 gccgttcaag tttgtcgact gggtcaaggg cgatcacatc gatctcgcca agaacgccga
      661 ctactggggg actccggcca agctcgacaa ggcgaccttc aagttcatct ccgacccgac
      721 ggcggcaacc tcgtcgctgc tcgccggcga cgtcgacgtg aacccggaat tccccgcgcc
      781 cgacgccctc gaccagttca agaacgatcc gcgcttcgtg gtcgaaatcg gcaacacgca
      841 gggcgagacg gtgctgtcga tgaacgacgg caagccgccg ctcgacaacg tcaaggtgcg
      901 cgaggcgatc gcccatgcca tcgatcgcaa ggcgatcatc gacggcgcca tgttcggcta
      961 cggcacgccg atcggcagct tcttcccgcc gtccgatccg gcctatatcg acctgacgtc
     1021 gatctcgaac ttcgacccgg acaagtcaaa gcagctgctt tccgatgcgg ggatcaagga
     1081 cctcgatctg tcgctgaagc tgccgccggc gagctacgcg cgtgcggcag gcccgatcat
     1141 ccagcaggaa ctggccaatg tcggcatcaa ggtcgacatc accaatgtgg agtgggccga
     1201 ctggctgcag aacgtgttca ccaacaagga tttcgacctg accatcatca gccacgtcga
     1261 gcccaatgat ttcggcgtct tcgcgcgcga cgactactac ttcaactacc actcggacgc
     1321 gtacaagaag atcatcgccg acctcaacaa caccaccgat ccggccaagc agacggagct
     1381 gaagcaggag gcgcagaaga cgctcgccaa cgatttcgcc gccggcttcc tgttcgagta
     1441 tccgaacatc gtggtcgcca acaaggacgt gcaggggatc tggaagaatg ccccgattcc
     1501 ggccgtcgac ctgacacagg tcagctgggc ccagtaaggg tggacaatcg atcccagatg
     1561 ggggagcctt cgggctcccc catcgcgttt ccggcgcgtc catgacccgc tatttgatcg
     1621 gccgcgtcgc ctccctgatc gtcagcctga tcgtcgccag cgtcgtcatc ttcctcatcc
     1681 tgtcggtggt gccgggcgac cccgcccagt tcatgctggg gctgaacgcg cggcccgata
     1741 cgctcgccgc cctgcgcgat cagctggggc tcaacgggcc gccgctggag cagtatttca
     1801 gctgggtgct gggcatgctg cacggcgacc tgggggtcag ctacacctac cgggtgccgg
     1861 tgagcgagct ggtgctgcag cggctcgggg tgtcgctgcc gctggcgctc tatgcgctgg
     1921 cgctgaccat cgtgatcgcg tttccggccg gcatcttcgc ggcgtcgcgg cgcaactcga
     1981 aggcggacgt cgcggtcatg ggggtcacgc agttcggcgt ggcggtaccg aatttctggt
     2041 tcgcgatgct acttgtgctg gtgttcgcga tcatcctgcg ctggtttcac gcaggcggct
     2101 tcgccggctg gaaccagggg ttctggcaag gcgtccaggg gctgacgctg ccggccatcg
     2161 cgctcgcgct cccgcaggcg tcgatcctgg cgcgggtgat gcggtcgtcg ctgctcgata
     2221 cgctcgatga ggactatgtc cgcacggcgc gggcacacgg gctcagcaag gcgcagacgc
     2281 tgtggcggca cgcggtgcgc aacgcactca tcccggtgct gacgattgtc ggcctgcagt
     2341 tcgcgttcct gctggcgggc ggcatcatca tcgagaacgt gttcttcctg cccggcctcg
     2401 gcaggctcgt gttccagggc attacgcagc gcgacctgat cgtcgtc
//
LOCUS       DATAZA010000473         2160 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2392604, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000473 DATAZA010000000
VERSION     DATAZA010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2160
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2392604"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            91..255
                     /locus_tag="VHZ56_11885"
     CDS             91..255
                     /locus_tag="VHZ56_11885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298711.1"
                     /translation="MTEVLRVVAGFAGPIVPVQGTADIDLGMLVHELAISINTAAAGG
                     NASLMALREN"
     gene            335..1441
                     /locus_tag="VHZ56_11890"
     CDS             335..1441
                     /locus_tag="VHZ56_11890"
                     /inference="COORDINATES: protein motif:HMM:NF024825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX4298712.1"
                     /translation="MTRLNWKSTVAGVALAAAALATPAMADDIKIGVLVPTTGGQATY
                     GQDMANSVQLAMDALNKAGGANTYSMVVGDDGCDPQQAVNAATKLASSGISAVVGGYC
                     SGATIPTLKIFGDAKLPFVITAANSTKLIPANPGNAFMINSTGNDQVAAAMVVWKAKG
                     FKSLAIVNEGDAYSQDLATLAQKSFTDAGGTVPDFETVNHGEQDYSAVITKIKAAAPD
                     AVFWTAYDDDGGPFVKQLREGGYQGAVFVGDGSTSDNFFKLAGDAAEGVFAFSSPTAD
                     FLPAAKDFAAAYQAKYNIAPSSYGPLTFDGMNLLADAITKAGGTDSTKLTAALQAEDY
                     KGIAGEITFKPDHTLARSNFVVVVGQGGKWTLAQ"
     gene            1597..>2160
                     /locus_tag="VHZ56_11895"
     CDS             1597..>2160
                     /locus_tag="VHZ56_11895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013893970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX4298713.1"
                     /translation="MTLASVLAQQLVNGLVLGSFYALVALGYTMVFGVVKLLNFAHGD
                     VYMVGAFAGFIVLSLIGGMVGTSWLGVALSILLSMIAVGFLGVVIERIAYAPMLKAPR
                     LSILITALAVSLVLQNSVLSLTQGQVLAFSPKLGFAGINIGSVFINYKQIALAVVAAL
                     LMLGLELFVSRTQYGRAMRAVSVDKDMS"
BASE COUNT          370 a          746 c          678 g          366 t
ORIGIN      
        1 cctgagcttg cttcgcgctt gcgcctctgt gcggactgga cgcggcaaac cgcggtcgat
       61 agcgtgctgg tcgagggaga tagagcgcgg atgaccgagg ttcttcgggt cgtcgccggc
      121 tttgccggtc cgatcgttcc ggtgcagggc acggcggaca tcgatctcgg catgctcgtg
      181 cacgagctgg cgatcagcat caacacggcg gcggccggcg gcaacgccag cctgatggcg
      241 ctcagggaaa actaggaaaa caggaatttc ggtcgccacg gcggccggat aaacgggcaa
      301 cagcccaggc attgagactg aacaggggac gaaaatgaca agactgaact ggaagtccac
      361 ggtggcgggc gtcgctcttg cggccgccgc gctggcgacg ccggccatgg ccgacgacat
      421 caagatcggc gttctggtgc ccaccaccgg tggccaggcg acctatggcc aggacatggc
      481 caactccgtg cagctcgcca tggatgcgct caacaaggcg ggcggcgcca acacctattc
      541 gatggtcgtc ggtgacgatg gctgcgatcc gcagcaggcg gtgaacgcag cgaccaagct
      601 cgcctcctcg ggcatctcgg ccgtcgtcgg cggctattgc tcgggcgcca cgatcccgac
      661 cctcaagatc ttcggcgacg ccaagctgcc cttcgtcatc accgcggcca actcgaccaa
      721 gctgatcccg gccaatccgg gcaatgcctt catgatcaac tcgaccggca acgaccaggt
      781 cgccgccgcg atggtggtgt ggaaggccaa gggcttcaag tcgctggcca tcgtcaacga
      841 aggcgacgcc tacagccagg atctcgcgac gctcgcccag aagagcttca ccgacgccgg
      901 cggcacggtc cccgacttcg agacggtcaa ccatggcgag caggactatt cggcggtcat
      961 caccaagatc aaggcggccg ctccggatgc cgtgttctgg accgcctacg acgatgacgg
     1021 cggcccgttc gtcaagcagc tgcgcgaagg cggctaccag ggtgccgtgt tcgtcggcga
     1081 cggctcgacc tccgacaact tcttcaagct cgccggcgac gcagccgagg gcgtcttcgc
     1141 cttctccagc ccgaccgcgg acttcctgcc ggccgccaag gacttcgccg cggcctacca
     1201 ggccaagtac aacatcgcgc cgagctccta cggcccgctc accttcgacg gcatgaacct
     1261 gctcgccgac gccatcacca aggccggcgg caccgacagc accaagctga cggccgccct
     1321 ccaggccgag gactacaagg gtatcgccgg cgagatcacc ttcaagcccg accacacgct
     1381 cgcgcgctcg aacttcgtcg tcgtcgtcgg ccagggcggc aagtggacgc tggcccagta
     1441 agcgaacttg tcggacccgg ccggcgttgc ttttccgcct ccctccccat cgcggggagg
     1501 gagcgcggtt gagccgcccg gaccgggcct gagacaaccc ccacccccag cccctccccg
     1561 caacggggag gggagcagtt cagtggccgc tgccccatga ccctcgcgag cgttcttgcc
     1621 cagcagctgg tgaacggcct ggtgctgggc tccttctatg ccctcgtggc gcttggctac
     1681 accatggtct tcggcgtggt gaagctgctc aatttcgccc atggcgacgt ctacatggtg
     1741 ggcgccttcg ccggcttcat cgtcctgtcg ctgattggcg gcatggtcgg caccagctgg
     1801 ctgggcgtgg cgctgtcgat cctgctgtcg atgatcgctg tcggcttcct cggcgtcgtc
     1861 atcgagcgca tcgcctacgc gccgatgctg aaggcgccac gactatcaat cctcatcacc
     1921 gctctggccg tctcgctggt cctgcagaac agtgttctga gcctgaccca gggccaggtc
     1981 ctcgctttca gcccaaagct cggctttgcc ggcatcaata tcggcagcgt cttcatcaac
     2041 tataagcaga tcgcgctggc ggtcgtcgcc gcgctgctga tgctgggcct ggaactcttc
     2101 gtctcgcgca cccagtacgg ccgggcgatg cgcgccgtct cggtcgacaa ggacatgtcc
//
LOCUS       DATAZA010000474         2654 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_186112, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000474 DATAZA010000000
VERSION     DATAZA010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2654
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186112"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..508
                     /locus_tag="VHZ56_11900"
     CDS             <1..508
                     /locus_tag="VHZ56_11900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007628816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4298714.1"
                     /translation="PFIADKMSAQQGYLTSEPLAVKQASGEEPNVFLLADNGYNGYST
                     TIETTTDMVKNKPDIVQKFVDASIIGWYNYLYGDNKAANDLIKTDNPEMTDDQIAFSI
                     QQMKDHGIVVSGDAGTKGIGCMTDDREKSFYDMLVGLKLIDASVDYKAAYTTQFVCKG
                     VGMDLVKK"
     gene            657..1418
                     /locus_tag="VHZ56_11905"
     CDS             657..1418
                     /locus_tag="VHZ56_11905"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018899841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4298715.1"
                     /translation="MRGVSKMFSNGTLALSNMSLTVQHGEFLSLLGPSGCGKSTALRI
                     VAGLGAPSSGSVAWPSSTINSRGLPEGDIGFVFQDPTLMPWSTVFGNVFLPLKLQGLR
                     KDAARPRIMETLALVGLSDFANAYPRELSGGMKMRVSIARALVTKPKLLLMDEPFAAL
                     DEITRQKLNDDVLMLWRQSGVTVVFVTHSVFESAYLSNRIVVMRARPGQVFTDLPLTT
                     SASRDEQYRTSEEYRATCAVVSKALQDAIHSAEVR"
     gene            1418..2266
                     /locus_tag="VHZ56_11910"
     CDS             1418..2266
                     /locus_tag="VHZ56_11910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007703523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4298716.1"
                     /translation="MAATDTTGTDAAAIIAPPSTPVSERVLRVLVPIGMLVLALVIWE
                     AYVLSSHIPKYILPSPVDVAVALYTDWPTLLPSLGVTLIITFEALGLALIGGVGLAII
                     LIQSKWIELALFPFAVILQVTPVVAIAPLLLIYAPNTQTALLIVAFLVAFFPILSNMV
                     SGLKSVDHNLLNLFDLYGAGRWQQLIYLKIPASMPYFMTGLRIGGGLALIAAVVAEFA
                     AGTAGAGSGLAFRILESGYRLLIPRLFAALVMLTFTGVAIFAITSFISWLVLHRWHES
                     AVRREN"
     gene            2305..>2654
                     /locus_tag="VHZ56_11915"
     CDS             2305..>2654
                     /locus_tag="VHZ56_11915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020046896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosine deaminase"
                     /protein_id="HEX4298717.1"
                     /translation="MGRPGAGIERVDISLADGRIAAIAPHQPGPGRDLDGGLVLPAFV
                     DIHTHLDKGHIWPRKPNPDGTWLGALLAVQGDRVGLWSAEDVGRRMDFALRSAYAHGT
                     AAIRTHLDSNPPQH"
BASE COUNT          426 a          893 c          872 g          463 t
ORIGIN      
        1 gccgttcatc gccgacaaga tgtcggcgca gcagggttac ctcacctccg aaccgctggc
       61 ggtcaagcag gcgagcggcg aagagcccaa cgtgttcctg ctggccgaca atggctacaa
      121 cggctactcg acgacgatcg aaacgacgac cgacatggtc aagaacaagc ccgacatcgt
      181 ccagaagttc gtcgatgcct cgatcatcgg ctggtacaat tatctctacg gcgacaacaa
      241 ggcggccaac gacctcatca agacggacaa tcccgagatg acggatgacc agatcgcctt
      301 ctcgatccag cagatgaagg atcacggcat cgtggtgtcg ggggacgcag gaaccaaggg
      361 catcggctgc atgacggacg accgcgagaa gtcgttctac gacatgctgg tcgggctcaa
      421 gctgatcgac gcctcggtcg actacaaggc ggcctacacg acgcagttcg tgtgcaaggg
      481 cgtcggcatg gacctcgtga agaagtaagg gtgccagtcg gcgtcgcttc gcgatatgag
      541 gaagcgcggc cttgccgcgc ttccgaccct gatggaacga gcctttgacc ctgactgaac
      601 tttctccccc gacggccgcc ccggtgcgcc cggccgcgcc gcggccggtg gtggtcatgc
      661 gcggcgtgtc gaagatgttc tcgaatggca cgctggcgct ctccaacatg tcgctgaccg
      721 tgcagcatgg cgagttcctg agcctgctgg ggccttcggg ctgcggcaag tcgacagcgc
      781 tgcggatcgt cgccgggctc ggcgctccgt cctcgggcag cgtcgcctgg ccgtcctcga
      841 cgatcaactc caggggcctg ccggaaggcg acatcggctt cgtgttccag gatccgacgc
      901 tgatgccgtg gtcgacggtg ttcggcaacg tcttcctgcc gctgaagctg cagggactgc
      961 gcaaggacgc ggcgcggcca cggataatgg agacgctggc gctggtcggg ctcagcgact
     1021 tcgccaatgc ctatccgcgc gagctctcgg gcggcatgaa gatgcgcgtc tcgatcgccc
     1081 gggcgctggt gaccaagcca aagctgctgc tgatggacga gccgttcgcg gcgctcgacg
     1141 agatcacgcg acaaaagctc aacgacgatg tgctgatgct gtggcggcag tccggcgtga
     1201 ccgtggtgtt cgtcacccat tcggtgttcg agagcgccta tctcagcaac cgcatcgtgg
     1261 tgatgcgggc ccggcccggg caggtgttca ccgacctgcc gctcaccacc tcggccagcc
     1321 gcgacgagca gtaccggact tccgaggaat accgcgccac ctgcgccgtg gtgtcgaagg
     1381 cgctgcagga tgccatccac agcgcggagg tgcgctgatg gccgccaccg acaccaccgg
     1441 caccgatgcc gcggcgatca tcgctccgcc ctcgacgccg gtgagcgaac gggtgctgcg
     1501 cgtcctcgtg ccgatcggca tgctggtgct ggcgctggtg atctgggaag cctacgtgct
     1561 ctccagccac atccccaaat acatcctgcc cagcccggtc gatgtcgccg tggcgctcta
     1621 caccgactgg ccgacgctgc tgccctcgct cggggtgacg ctgatcatca ctttcgaggc
     1681 gctggggctg gcgctgatcg gcggcgtcgg gctggcgatc atcctgatcc agtcgaaatg
     1741 gatcgagctg gcgctgtttc cgttcgcggt gatcctgcag gtgacgccgg tggtcgcgat
     1801 cgcgccgctg ctgctgatct atgcgcccaa cacgcagacg gcgctgctga tcgtggcgtt
     1861 cctcgtggcg ttcttcccga tcctctccaa catggtgtcg gggctgaaga gcgtcgacca
     1921 caatctgctc aacctgttcg acctctacgg cgccggccgc tggcaacagc tcatctacct
     1981 caagatcccg gcctcgatgc cgtacttcat gaccggcctc aggatcggcg gcggactcgc
     2041 gctgatcgcg gcggtggtgg ctgaattcgc cgccggcacg gcgggcgccg gctcggggct
     2101 ggcgttccgc atcctcgagt ccggctatcg gctgctgatc ccgcggctgt tcgcggcgct
     2161 ggtcatgctg accttcaccg gggtcgcgat ctttgccatc acctcgttca tctcgtggct
     2221 cgtgctgcac cgctggcacg agagcgccgt gcgccgcgag aactgatgga ggtcctgcgc
     2281 aacgcctcgg tcccgctggc gctgatgggc cgtcccggcg ccggtatcga gcgggtcgac
     2341 atcagcctcg ccgacgggcg catcgcggcg atcgcgccgc accagccggg gcccggccgc
     2401 gacctcgatg gcggactggt gctgccggcg ttcgtcgaca tccacacgca tctcgacaag
     2461 ggccacatct ggccgcggaa gccgaacccg gacggcacct ggctcggggc gctgctcgcc
     2521 gtgcagggcg atcgcgtcgg cctgtggtcg gccgaggatg tcggccgccg catggatttc
     2581 gcgctgcgct ccgcctacgc ccacggcacc gcggccatcc ggacgcatct cgattccaat
     2641 ccgccgcagc acga
//
LOCUS       DATAZA010000475         3434 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_999347, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000475 DATAZA010000000
VERSION     DATAZA010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3434
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_999347"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..365)
                     /locus_tag="VHZ56_11920"
     CDS             complement(<1..365)
                     /locus_tag="VHZ56_11920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase"
                     /protein_id="HEX4298718.1"
                     /translation="MVDSIRISVDAMGGDIGPRVAIEGAWLALRERRNVSFIFHGREA
                     ELTPLLEKFPDLKAASRIVHCDNVISMDEKPAQALRKGRGNSSMWAAIQSVKDGDADV
                     VISGGNTGALMAMSLICLRP"
     gene            complement(447..995)
                     /locus_tag="VHZ56_11925"
     CDS             complement(447..995)
                     /locus_tag="VHZ56_11925"
                     /inference="COORDINATES: protein motif:HMM:NF014657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HEX4298719.1"
                     /translation="MTHGADRFRLADAGIRLDSMPAAGRALHVVPSADERAAVAAILG
                     VTAVDSLDVTLHAMRFRGGMRVTGRLVATLTQPSVVTLEPLRQDISEPIDRIFLPSGE
                     KDYAGPANAEVFVDLEGDEVPDHFEGTEADLTDLVVETIALAVDLYPREPGVTLDDLG
                     LAPDVEEAHPFAALKTLKDKGR"
     gene            complement(992..1519)
                     /locus_tag="VHZ56_11930"
     CDS             complement(992..1519)
                     /locus_tag="VHZ56_11930"
                     /inference="COORDINATES: protein motif:HMM:NF015914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome C chaperone family protein"
                     /protein_id="HEX4298720.1"
                     /translation="MSLIFGIFRKSATPDAAFDAYRSIVAQSRQVKFYADWGVADTVT
                     GRFDMISLHLALLLHRLRDDPQGQAFGQSLVELFFRDMDRSLRELGVTDLGVPRKVKK
                     MGDLFYGLARVLGEALDHRSAPEIESVLVRNVYGAPSPGAALLAAYLLEERARLAAEP
                     MAAIVAGQHAAGVAA"
     gene            1650..2108
                     /gene="bamE"
                     /locus_tag="VHZ56_11935"
     CDS             1650..2108
                     /gene="bamE"
                     /locus_tag="VHZ56_11935"
                     /inference="COORDINATES: protein motif:HMM:NF016258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEX4298721.1"
                     /translation="MPQRKPAQILVSVAGAGLIALMLAGCSGLGTGMALATNKVEGYQ
                     ISQDALAQIRPGQSQDLVETVLGSPQTINAFNEGSAWYYVETRVSETAFGLTSVQSRT
                     VLAVYFDKDKRVADKALYSAKDGKVFTIEGRKTPSYGEDKSFIQSMIDSL"
     gene            complement(2116..2592)
                     /gene="nusB"
                     /locus_tag="VHZ56_11940"
     CDS             complement(2116..2592)
                     /gene="nusB"
                     /locus_tag="VHZ56_11940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011927283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEX4298722.1"
                     /translation="MPTPKSESDTPRLANQRGAARLAAVQALYQMDVGRQSLEDTLSQ
                     FGAHMLGREVEGEQYLPADADFFGQIVRGVIKSQLDIDPTIDNALSKDWPVGRIDATL
                     RAILRAAAFELLRRRDIPAGVVISEYVDIAKAFYEDDAPGLVHAVLDTIARQVAAG"
     gene            complement(2598..>3434)
                     /locus_tag="VHZ56_11945"
     CDS             complement(2598..>3434)
                     /locus_tag="VHZ56_11945"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HEX4298723.1"
                     /translation="YTSHAPSTASIAAAGIGRVVVGTLDPVRAGEGLAELAAAGIEAV
                     HLPYLPSDVLNEGYLTRLVQGRPFVTLKITLTSQGMVGHARRGSPSLLGVEARRWLER
                     ERAASDAVMSGAARAEIEDNDLRVHLAGLDDRAAPRVILAGSRDLELDVELFRAVSGI
                     PIMVLAAADRPLELRPGVEIVAVEGRRGRPDLRQSLALLAARGVSRLLVEAGARLAES
                     FIAGELVDRLHVVDVAADIGRLGVPAALLGRFEDRIAAARFAEVDRRMLGEDKVRTFE
                     RS"
BASE COUNT          597 a         1138 c         1195 g          504 t
ORIGIN      
        1 gggcgcaggc agatcagcga catcgccatc agcgcaccgg tgttgccgcc ggaaatgacg
       61 acatcggcat cgccgtcctt gaccgactgg atggccgccc acatcgatga attgcccctg
      121 cccttgcgga gcgcctgcgc cggcttttcg tccatcgaaa tgacgttatc gcaatggacg
      181 atgcggcttg ccgccttgag gtcggggaat ttctcgagca gcggcgtgag ctcggcctcg
      241 cggccatgga agatgaagct gacgttgcgc cgctcgcgca gcgccagcca ggcgccctcg
      301 atcgcgaccc gggggccgat atcgccgccc atggcgtcga ccgaaatgcg gatggaatcg
      361 accatttgtt ccgtgttttg cccgccccgc ggacgccccg caccttaatc aaacgctttt
      421 ggcgtgcaag tgcgggcggc cgcggcctaa cggcccttgt ccttgagcgt tttgagcgct
      481 gcgaaggggt gcgcttcctc cacatcgggc gcaagaccaa ggtcgtcaag ggtgacgccc
      541 ggctcgcgcg ggtagaggtc caccgccagc gcgatggtct cgacgacgag gtcggtcaaa
      601 tccgcctcgg taccctcgaa atggtcggga acctcgtcgc cctcgaggtc gacgaacacc
      661 tcggcattgg ccgggccggc gtagtccttt tccccagagg gaaggaaaat gcggtcgatc
      721 ggctcggaga tatcctggcg cagcggctcg agcgtcacca ccgaaggctg cgtcagcgtg
      781 gcaacaagcc ggccggtgac gcgcatgccg ccgcggaagc gcatggcgtg gagagtgaca
      841 tcgaggctgt cgacggcggt gacaccgagg atggcggcga ccgcggcgcg ttcgtccgcc
      901 gagggcacca cgtgcagcgc ccggccggcc gcgggcatcg aatcaagccg gatgccggcg
      961 tcggcaagcc ggaagcggtc cgccccgtgc gtcacgccgc gacgcctgcc gcgtgctgcc
     1021 cggcgacaat ggccgccatc ggttcggcag caaggcgggc gcgttcctcg agcaggtagg
     1081 cggccagcag cgcggcgccc ggcgatggcg cgccatagac gttgcggacg agcaccgatt
     1141 cgatttcggg cgcgctgcgg tggtcgagcg cttcacccag cacgcgggcg aggccataga
     1201 acaggtcgcc catcttcttg accttccgcg gcacgccgag gtcggtgacg ccgagctcgc
     1261 ggagcgagcg gtccatgtcg cggaagaaca gctcgaccag cgattgtccg aacgcctgcc
     1321 cctgcggatc gtcgcgcagc cgatgcagca acagcgcaag gtggagcgag atcatgtcga
     1381 agcggccggt gactgtgtcg gcaacgcccc agtcggcata gaacttcacc tgccgggatt
     1441 gcgccacaat ggatcgatag gcgtcgaaag cggcgtcggg ggtggcggat ttacggaaaa
     1501 taccgaagat caaagacatg ctccgcgcct gagagatcgg ggtgtgggcg gtcggtcgag
     1561 cttgccatgg tccgtcccgg acagctaaac aaaccggcgc tctgccagag tccgcgtctt
     1621 attcgagagc catcgtgaaa gtcaaatcca tgccccagcg caaaccggcc cagatcctcg
     1681 tttccgtcgc cggggcgggg ctcatcgcgc tgatgctggc gggatgcagc ggcctcggaa
     1741 cgggcatggc gctcgcgacc aacaaggtcg agggctacca gatttcgcag gacgcactgg
     1801 cgcagatccg gccggggcaa agccaggacc tggtcgagac ggtgctcggc tcgccgcaga
     1861 ccatcaacgc cttcaacgag ggctcggcct ggtactacgt ggaaacgcgg gtgagcgaga
     1921 cggccttcgg gctcacttcg gtgcagtcgc gcacggtgct tgcggtctat ttcgacaagg
     1981 acaagcgcgt cgccgacaag gccctctaca gcgccaagga cggcaaggtg ttcaccatcg
     2041 agggccgcaa gacgccgtcc tatggcgagg acaagagctt catccagtcg atgatcgact
     2101 cgctgtagcg gcggctcagc cggcagcgac ctgccgggcg atggtgtcga gcacggcatg
     2161 gacgagcccc ggggcgtcgt cctcgtagaa cgccttggcg atatcgacat attcggagat
     2221 caccacgccc gccggaatgt cgcggcggcg cagcaattcg aacgccgcgg cgcgcaggat
     2281 ggcgcgcagc gtcgcatcga tgcggccgac cggccagtcc ttgctcaggg cgttgtcgat
     2341 ggtggggtcg atatcgagct ggctcttgat gacgccacga acgatctggc cgaagaaatc
     2401 ggcgtcggcc ggcagatact gctcgccctc gacttcgcgc ccgagcatgt gggcgccgaa
     2461 ctggctgagc gtgtcctcga gcgactggcg gcccacgtcc atctggtaga gcgcctgcac
     2521 cgcagccagc cgcgcggccc cgcgctgatt ggcgagacgc ggcgtatcgc tttcggactt
     2581 gggggtcggc atgaaactca gctgcgctcg aaggtgcgca ccttatcttc gcccagcatg
     2641 cgccggtcaa cctcggcgaa tcgcgctgca gcaatgcggt cttcgaagcg gccgagcagc
     2701 gccgcgggca ctcccagccg gccgatatcg gccgccacgt cgacgacatg caggcggtcg
     2761 accaactccc cggcgatgaa ggactcggcc agccgcgcgc ccgcctcgac caggagacgg
     2821 ctgacgccgc gcgccgcgag cagtgccagc gactggcgca aatcgggccg gccgcggcgg
     2881 ccctcgacgg cgacaatttc gacaccgggg cgcagctcca gcggccgatc cgctgcggcc
     2941 aggaccatga tggggatgcc ggagacggcc cggaacagct cgacgtcgag ctcgagatcg
     3001 cgcgagccgg caaggatcac gcgcggcgcg gcgcggtcgt cgaggccggc cagatgcacg
     3061 cgcagatcgt tgtcctcgat ctcggcgcgg gcagcaccgg acatcaccgc gtcggaagcg
     3121 gcgcgttcgc gctcgagcca gcggcgggcc tcgaccccga gcagcgacgg cgagccgcgg
     3181 cgggcatggc caaccatgcc ctgcgaggtc agggtgatct tcagcgtcac gaagggccgg
     3241 ccctggacga ggcgcgtgag gtagccctcg ttgaggacat cggacggcag atacggcagg
     3301 tgcaccgcct cgatgccggc ggccgcaagc tccgcgagcc cctcgccggc ccgcaccgga
     3361 tcgagggtcc cgaccaccac ccggccgatc ccggcggccg cgatggatgc ggtggacgga
     3421 gcatggctcg tgta
//
LOCUS       DATAZA010000476         2760 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2508820, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000476 DATAZA010000000
VERSION     DATAZA010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2760
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2508820"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1989)
                     /locus_tag="VHZ56_11950"
     CDS             complement(<1..1989)
                     /locus_tag="VHZ56_11950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298724.1"
                     /translation="MKPTPRSGQRVRKRSAARTIGLALAWLFGVPLSLAIVLYVALLI
                     HPLPLPFISTQVRNLIVAAMPPGTDLELGDMALTLEGYAWPVIQFSPVVYKDTTTGAK
                     LRMDALEVGFSPIRALIGQPGATVTMVGPHIQVNQDLFGPRLADFEIVPDPSGGPATV
                     RVLEGSTAFPDAGIHSGGIDVTGKQTDATRLRSDNDWLIYNIEAAQKGIASIIEQAQM
                     GRFSRLVIRKGTLDMNDALYGVFRTFDSINLDIAPSPNGKAVEGNFSADFGGTVMKGI
                     LERVIDDKGDARLKVSLTNFDLASFVPHINDSDAVIGIAGAAAVSLDVGFDAQSGTIK
                     DGNFRVDMTGTDLRINADYFPIASSIIEVNWAPHTGTFTMNDATIDIGKSSAKMSGVF
                     VLGLDDLYGPTVGISMTGHDVVIAPGDPDVPAGGFDSISFKGWSAPIYGALGIDEAVM
                     IRGDERIESKGRIDLLNKGIGVDVAVAGQGITADDIKRLWPYFVASDARAWFSRSVMG
                     GTIESANMKFAFPVGTLDPKGGLSPIPQNGVFVEMVADGVKVKPTDAMAPIEVQGKTR
                     LQMHDSEITLAADGGIVPTDKGNISVANAAVVLSPGNSPGDQMIEVSGDVSSGIPALT
                     SMVNQMQPSLLKGQNLPVDMTTMNGTLNVRLLSTITLDK"
     gene            2141..2614
                     /locus_tag="VHZ56_11955"
     CDS             2141..2614
                     /locus_tag="VHZ56_11955"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX4298725.1"
                     /translation="MLNPGDAAPDFTLADDRGGQFHLAAHRGRPVVVSFYCEDETEGC
                     LIENQEFSALGSEFETLGIPVVAISPQDVASHKRFAGKSGFRHPLLADTGLVANKAYD
                     VWQLKKLWGREYMGTVRVTYVVDAEGRIAEVLRASRIKGHAQKVLEAARALAAGR"
BASE COUNT          467 a          874 c          926 g          493 t
ORIGIN      
        1 cttgtcgagc gtgatggtcg acagcagccg gacattgagc gtgccgttca tcgtggtcat
       61 gtcgaccggc aggttctgtc ccttcagcag cgagggctgc atctggttga ccatcgaggt
      121 cagcgccgga atgccgctcg aaacgtcgcc cgaaacctcg atcatctggt cgcccgggct
      181 gttccccggc gacagcacga cggcggcgtt ggcgaccgag atgttgccct tgtcggtcgg
      241 cacgatgccg ccgtcggcgg ccagcgtgat ttcggaatcg tgcatctgca ggcgggtctt
      301 gccctgcact tcgatgggcg ccatggcgtc ggtcggcttc accttcacgc cgtcggcgac
      361 catttcgacg aaaacgccgt tctgcgggat cggcgacagg ccgcccttcg ggtcgagggt
      421 gccgaccggg aacgcgaact tcatattggc gctctcgatc gttcccccca tcaccgatct
      481 ggagaaccag gcgcgggcgt ccgaggccac gaaatacggc cacagccgct tgatgtcgtc
      541 ggcggtgatg ccctgcccgg caacggccac gtcgaccccg atgcccttgt tgagcaggtc
      601 gatgcggccc ttgctctcga tccgctcgtc gccgcggatc atcaccgcct cgtcgatgcc
      661 gagcgccccg tagatcggcg ccgaccagcc cttgaagctg atgctgtcga agccgccggc
      721 gggaacgtcg gggtcgccgg gagcgatcac cacgtcatgg ccggtcatcg agatgccgac
      781 ggtcggcccg tagaggtcgt cgagcccgag cacgaacacg ccggacatct tggcgctgct
      841 cttgccgatg tcgatggtgg cgtcgttcat ggtgaaggtg ccggtatgcg gcgcccagtt
      901 gacctcgatg atgctgctgg cgatcgggaa atagtcggcg ttgatccgca ggtcggtgcc
      961 ggtcatgtcg acgcggaaat tgccgtcctt gatggtgccg ctctgcgcat cgaagccgac
     1021 gtcgagcgac accgcagccg ccccggcgat gccgatcacg gcgtcggaat cgttgatgtg
     1081 cggcacgaac gaggcgagat cgaaattggt cagcgacacc ttgagccggg catcgccctt
     1141 gtcgtcgatg acgcgctcga ggatgccctt catcacggtg ccgccgaaat cggcggaaaa
     1201 attgccctcg accgccttgc cgttcggcga cggcgcgatg tcgaggttga tcgagtcgaa
     1261 ggtccggaag acgccgtaga gggcgtcgtt catgtcgagc gtgcccttgc ggatgaccag
     1321 ccgcgagaag cggcccatct gggcctgttc gatgatcgag gcgatgcctt tttgcgccgc
     1381 ctcgatgttg tagatcagcc agtcattgtc cgaccgcaga cgcgtcgcgt cggtctgctt
     1441 gccggtgacg tcgatgccgc ccgaatgaat cccggcatcg ggaaaagcgg tcgagccctc
     1501 gagcacgcgc accgtcgccg ggccgccgct gggatcgggg acgatctcga aatcggcaag
     1561 ccggggtccg aacaggtcct ggttcacctg gatgtggggt ccgaccatcg tcacggtcgc
     1621 cccgggctgg ccgatgagcg cgcggatcgg cgaaaagccg acctccagcg catccatgcg
     1681 cagcttggcc ccggtcgtgg tgtccttgta gaccacgggc gagaactgga tcaccggcca
     1741 ggcatagccc tcgagggtca gcgccatgtc gcccagctcg aggtcggtgc cgggcggcat
     1801 cgccgcgacg ataaggttgc gcacctgggt cgagatgaac ggcagcggca gcggatggat
     1861 gaggagcgcc acgtagagca cgatggcgag gctcagcggc accccgaaca gccaggcgag
     1921 cgcgaggccg atggttcggg cggcagagcg cttgcggacc ctctgacctg atcgaggcgt
     1981 tggcttcaat tatgatccgc acgagggtct ggcggcggcg attccaagcg gcccccagaa
     2041 tcatctgcca tcacggtgtg tattgtcgga tgataccggc tgcaataagg cactaacacc
     2101 ctgaaaagtc cggttttgct cactgtggag acgatggacg atgctcaatc cgggcgacgc
     2161 ggcccccgac ttcacgcttg ccgacgatcg cggcggccag tttcatctgg ccgcgcaccg
     2221 cggccggccg gtggtggtgt cgttctactg tgaggacgag accgaaggct gcctgatcga
     2281 gaaccaggaa ttcagcgccc ttggctccga attcgaaacg ctggggattc cggttgtggc
     2341 catctccccg caggacgtcg ccagccacaa gcggttcgcc ggcaagagcg gcttccgcca
     2401 tccgctcctc gccgacaccg ggcttgtcgc caacaaggcc tacgatgtgt ggcagctgaa
     2461 gaagctgtgg ggacgcgaat atatgggcac ggtccgggtg acctacgtgg tcgatgccga
     2521 gggccgcatc gccgaggtgc tcagggccag ccgcatcaag ggccatgccc agaaggtgct
     2581 ggaggcggcg cgggccctcg ccgcgggccg ttaacctcgc gttagagctt cttttccgcc
     2641 gcattaacct taacggacca tgattttccg gatcgcagta gtatccggga gttgctcgtg
     2701 gtgcgtccca agaccccgcc caggcccttc ggcaagccgg cggcggcgcg ccagaaatcc
//
LOCUS       DATAZA010000477         4178 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2158997, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000477 DATAZA010000000
VERSION     DATAZA010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4178
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2158997"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1964)
                     /locus_tag="VHZ56_11960"
     CDS             complement(<1..1964)
                     /locus_tag="VHZ56_11960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CarD family transcriptional regulator"
                     /protein_id="HEX4298726.1"
                     /translation="MTELTRPTRTIVNVPDGMQPVVFARLVEDRLKAAPEASAAAVFV
                     ARDGRRLQRMEDVLRAMLPGHAILTLPAWDCLPYDRVSPNGVTIAARMTTIAALTSGE
                     TRGAIVLTAVNALVQKLPPRDLVAGMSFAAQAGQVVDSDRLILWASLNGYLRVPTVRE
                     TGEYAVRGGLVDLFPASMETPLRFDFFGKALESIRTFDPGTQRTTGNLPAISLAPMSE
                     VLLNDETIKRFRARYTTMFGGSTGDDPLYGAISAGQRFPGLEHWLAFFYDHLDRLGDY
                     TGDAPFVFDDQALEAFADRQAQIRDYYEARDQARTDRKLAAGGAPYKPVPPDQLYEVD
                     GHPYRLSAAPAIQLSSFAHPDETRTEDAGGRIGHSFAAERQAQDVNLFEAVVGRLKAD
                     GRKQRHTVIACWSDGSRDRMAQLLGDHGLAHPRLAENWQDAITTSPATTALVVLPLES
                     GFETDSLVVLSEQDVLGERLLRPQRRKKASDALTEATSLAAGDLVVHVDHGIGRFLGL
                     KQIEAMGAAHDCVEIQYAGETKLYLPVENIELLSRYGSEGGDVMLDKLGGVAWQAKKA
                     KLRKRIRDMAEQLIKIAAQRLLVKADTVDINSGAYDEFAARFPYEETEDQLIAISAVF
                     DDLTTGKVMDRLVCGDVGFGKTEVALRAAFA"
     gene            complement(1961..2245)
                     /locus_tag="VHZ56_11965"
     CDS             complement(1961..2245)
                     /locus_tag="VHZ56_11965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008123080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HEX4298727.1"
                     /translation="MAPQKDAGEDVAIRRRRLRYRAWHRGTKEMDLVLGPFADAHVEG
                     YGAPELDRLEALMDEEDTDLLKWVMGQEAVPADADAPLLHTIIAYRLKTS"
     gene            2356..2628
                     /locus_tag="VHZ56_11970"
     CDS             2356..2628
                     /locus_tag="VHZ56_11970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HEX4298728.1"
                     /translation="MKITFDPTKRQATLADRQLDFLDAESVFDGPNYRFIDERFDYGE
                     ERVVTIGRLNGRMVVVVWTQRGEARHVISMRKANDRENVLYGKYLG"
     gene            2588..2845
                     /locus_tag="VHZ56_11975"
     CDS             2588..2845
                     /locus_tag="VHZ56_11975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HEX4298729.1"
                     /translation="MTAKTSSTESTWVDPDEAPELTDEWFQKADLYDGEKLIRRGRRP
                     LDNPKKAISLRVDADVLERFKAGGPGWQGRMNEALRKAAGL"
     gene            2853..>4178
                     /locus_tag="VHZ56_11980"
     CDS             2853..>4178
                     /locus_tag="VHZ56_11980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX4298730.1"
                     /translation="MSRPPALDPLFRSLRSFKGVGPQLGALLTRFLSSAEGQDAMALD
                     LLMHMPAGFVDRRRMDGVASTFVGHTATLKLHVDRHEPPPRNMPTRPHRVFAHDETGE
                     VQLVYFRAQGGWVEKLLPVGEERYVSGTIGFFQGMKQITHPDYVVEVDRLGTLPLVEP
                     VYPLTHGLSSKVLLKLVREVLDALPELPEWIGSDRQAQFRWPRFHEAMRLVHAPNEPI
                     EASLLSPARMRLAYDEYFAGQLALMIVRASVVAPRGIARQFTGEITARLQAALPFALT
                     FGQQSALTDIREDLTAPLRMSRLLQGDVGAGKTVVALLAMAAVAESGAQSALMAPTEL
                     LAAQHFRTISPLAEAAGLRAALLTGKQPAPERREVLARIAAGEVDIVVGTHALFQSAV
                     TFRNLGLVVVDEQHRFGVEQRLALSDKGRDADLLVMTATPIPRTLVLTHF"
BASE COUNT          637 a         1365 c         1486 g          690 t
ORIGIN      
        1 gcgaacgccg cccgcagcgc cacctcggtc ttgccgaagc cgacgtcgcc gcagaccagc
       61 cggtccatga ccttgccggt cgtgaggtcg tcgaagactg ccgagatggc gatgagctgg
      121 tcctcggttt cctcataggg gaagcgcgcc gcgaactcgt cataggcgcc ggaattgatg
      181 tcgaccgtgt cggccttgac cagcagccgc tgcgccgcga tcttgatcag ctgctccgcc
      241 atgtcgcgga tgcgcttcct gagcttggct ttcttcgcct gccaggcgac gccacccagc
      301 ttgtcgagca tcacgtcgcc gccctccgag ccgtagcggc tcaggagctc gatgttctcg
      361 accggcagat agagcttggt ctcgccggcg tactggatct cgacgcagtc atgcgccgcg
      421 cccatcgctt cgatttgctt caggccaagg aagcggccga tgccgtggtc gacgtggacg
      481 acgaggtcgc cggcggcgag gctggttgcc tcggtcagcg cgtccgaagc cttcttgcgc
      541 cgctgcggac ggagcagccg ctcgccgagg acgtcttgct cggagaggac gacgaggctg
      601 tcggtctcga agccgctttc gagcggcagc accaccagcg ccgtggtggc gggcgaggtg
      661 gtgatggcgt cctgccagtt ctcggcgagg cgcggatggg cgaggccgtg gtcgcccagc
      721 agttgtgcca tgcggtcgcg cgagccgtcg gaccagcagg cgatgacggt gtggcgctgc
      781 ttgcggccgt cggccttgag gcggccgacc acggcctcga agagattgac gtcctgcgcc
      841 tgccgctcgg cggcgaagct gtggccgatg cggccgccgg catcctcggt gcgcgtctcg
      901 tcgggatggg cgaagctcga gagctggatc gccggggcgg cgctcagccg gtagggatgg
      961 ccatcgactt catagagctg gtcgggcggg accggcttgt acggcgcccc gccggccgcg
     1021 agcttccggt cggtccgcgc ctggtcgcgc gcctcgtagt agtcgcggat ctgcgcctgg
     1081 cggtcggcga aggcctcgag cgcctggtcg tcgaaaacga agggcgcatc gccggtgtag
     1141 tcgcccagcc ggtcgaggtg gtcgtagaag aacgccagcc agtgctcgag acccgggaag
     1201 cgctgcccgg cgctgatcgc gccatacagc ggatcgtcgc cggtcgagcc gccgaacatc
     1261 gtggtgtagc gcgcccggaa gcgcttgatc gtctcgtcgt tgagcagcac ctcgctcatc
     1321 ggcgccagcg agatcgccgg cagattgccg gtggtgcgct gcgtgccggg atcgaaggta
     1381 cgtatcgatt ccagcgcctt gccgaagaag tcgaagcgga gcggcgtctc catgctggcc
     1441 gggaacaggt cgacgaggcc gccgcgcacc gcatactcgc cggtctcgcg aaccgtcggc
     1501 acccgcaggt agccgttgag cgacgcccag aggatgagcc ggtcgctgtc gaccacctgc
     1561 ccggcctgcg ccgcaaagct cattcccgcc accaggtcgc ggggcggcag cttctgcacc
     1621 agcgcgttga ccgccgtcag cacgatggcg ccccgcgttt cacccgaggt gagcgccgcg
     1681 atcgtcgtca tgcgcgccgc gatggtcacg ccattgggcg acacccggtc gtagggcagg
     1741 cagtcccagg ccggcagggt gagaatggcg tggcccggca gcatggcgcg cagcacgtct
     1801 tccatgcgct gcagccggcg gccgtcgcgg gccacgaaca ccgccgcggc gctcgcctcg
     1861 ggagcagcct tcagccggtc ctcgacgaga cgcgcgaaga ccaccggctg catgccgtcg
     1921 gggacgttga cgatggtgcg ggtcggccgc gtgagttcgg tcatgaggtc ttcaggcggt
     1981 acgcgatgat ggtgtggagc aacggggcgt cggcgtcggc ggggacggct tcctgcccca
     2041 tcacccattt caggaggtcg gtgtcttcct cgtccataag ggcttccagc cgatcgagtt
     2101 ccggggcgcc atagccttcc acatgggcgt cggcgaaggg ccccagcacg aggtccattt
     2161 ccttggtgcc gcgatgccag gcgcggtagc gcagccgccg ccggcgaata gcaacgtcct
     2221 caccggcgtc tttttggggg gccatgagca gggtggtctc gggggatatt aagcagtgct
     2281 tacgccgatt ggcaggtgct cgcaattgcg gatttgtgta tatacataaa tgatggccgt
     2341 atgtagaaag tgcgcatgaa gatcaccttc gatccgacca agaggcaagc gacgctggct
     2401 gaccggcaac tcgatttcct cgatgccgaa tcggtcttcg acggacccaa ctatcggttc
     2461 atcgacgagc gctttgacta tggagaggag cgcgtggtga cgatcggacg actgaacggt
     2521 cggatggtcg tggtggtgtg gacacaacgc ggcgaggctc gccacgtgat atcgatgagg
     2581 aaagcaaatg accgcgaaaa cgtcctctac ggaaagtacc tgggttgacc ctgacgaggc
     2641 ccccgaactg actgacgagt ggttccagaa ggccgatcta tacgatggcg agaagcttat
     2701 caggcgcggc cgccggccgc tcgacaaccc caagaaggct atttcactgc gcgtcgatgc
     2761 cgacgtgctg gagaggttca aggccggtgg gcccggctgg caggggcgga tgaacgaggc
     2821 gctgcggaag gccgcgggtc tctgacggcg gcatgtcgcg tccccctgcc ctcgatccgc
     2881 tgttccgctc gctgcgctcg ttcaagggcg tggggccgca gctgggcgcg ctgctcaccc
     2941 gcttcctgtc gtccgccgag ggccaggatg ccatggcgct cgacctgctg atgcacatgc
     3001 cggccggctt cgtcgaccgg cggcggatgg atggcgtcgc cagcaccttc gtcggccaca
     3061 ccgcgacact gaagctccac gtcgaccggc acgagccgcc gccgcgcaac atgccgacgc
     3121 ggccgcaccg ggtgttcgcc cacgacgaga ccggcgaggt gcagctggtc tacttccgcg
     3181 cgcagggggg ctgggtcgaa aagctgctgc cggttggcga ggagcgctac gtttccggaa
     3241 ccatcggctt cttccagggg atgaagcaga tcacccatcc cgactacgtg gtcgaggtcg
     3301 accggctggg gaccctgccg ctggtcgagc cggtctatcc gctgacccat ggcctgagtt
     3361 cgaaagtcct gctgaagctg gtgcgggagg tgctggacgc cctgcccgag ctgcccgagt
     3421 ggatcggcag cgaccggcag gcgcagtttc gctggccccg cttccacgag gcgatgcggc
     3481 tggtccatgc gccgaacgag ccgatcgagg cgagcctgct gtcgccggcg cggatgcgtc
     3541 tcgcctacga cgaatatttc gccggccagc tggcgctgat gatcgtgcgc gccagcgtcg
     3601 tggcgccgcg cggcatcgcc cgccagttca ccggcgagat cacggcgcgg ctgcaggcgg
     3661 ccctgccctt tgcgctgacc ttcggccagc aatcggcgct caccgacatc cgcgaggatc
     3721 tgacggcgcc gctgcgcatg tcgcggctgc tgcagggcga cgtcggggcc ggcaagacgg
     3781 tggtggcgct gctggcgatg gccgcggttg ccgagagcgg ggcgcaatcg gcgctgatgg
     3841 cgccgaccga gctgctcgcg gcgcagcatt tccgcaccat ctcgccgctt gccgaagccg
     3901 ccggactgcg cgcggcactg ctcaccggca agcagccggc gccggagcgc cgcgaggttc
     3961 tggcgcggat cgcggccggc gaggtcgaca tcgtcgtcgg cacccacgcg ctgttccagt
     4021 cggcggtgac gttccggaac ctcgggctcg tcgtggtcga cgagcagcac cggttcggcg
     4081 tcgagcagcg gctcgccctc agcgacaagg gacgcgatgc ggacctcctg gtgatgacgg
     4141 cgacgccgat cccgcggacg ctggtgctca cgcatttc
//
LOCUS       DATAZA010000478         3311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_533705, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000478 DATAZA010000000
VERSION     DATAZA010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3311
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_533705"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2000)
                     /locus_tag="VHZ56_11985"
     CDS             complement(<1..2000)
                     /locus_tag="VHZ56_11985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298731.1"
                     /translation="MARAYQQSQPADYGRDPAEWQSLRQELVALLDTVDNQVARAQPP
                     APERTREPRYAEADDAALRQREALRSVQRQLSRFEEPAPPGPPNPRDTLQSAINQIRA
                     RQGEARQAAPPPAPPPVPPSQRLDTAMLDRLTQSFNGLTGRLERLEGEIKAQIKTGTN
                     IKDVADQVAQLAHVVELLAGAVGETGQVKRLEGQIASLGKIMAQGREMDIGTLTRRLD
                     DVASTVGKLAELQVGYADRVQNPVDTQAFQDGMRSIETSVRNVYDRIDALERHSTLSP
                     SDLDHVVAEMARFTETLKQGQQEPLHLVELVDALNTRIADIESGDRLLHGLRKDLSAL
                     RDAVIGAIGPRFDALEQRMDTLGTREDMAEIWRQIGMLGDRIGERPIDPGIGQLEAQV
                     RHLVARMDQTGEQLSGLARLYASEPLPAPMPDFDAVAEMVAARTAEAVRGTPDPILAD
                     TVNGLEARIAAMLEQMHRDPEIGDFGDMQAGISEVNERLKRLETSLLERRDFTDAEAP
                     ARARPTDIATIIAATESAAPPVRRRVDSMPRSPTTEAPLAAEPFPEPAGPVQSALDEK
                     AASRKRHPGLDEDLSLAARYDAPVAPMPPSDFELQPSSPPAPMPSAGFMDDAPAPAPR
                     PVADHPVVATSSRNTFIEAARRAAQRQTPGRAEVAPNSLIGRA"
     gene            2193..2840
                     /locus_tag="VHZ56_11990"
     CDS             2193..2840
                     /locus_tag="VHZ56_11990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX4298732.1"
                     /translation="MSRRIIIVDDHPLFRAALRQTLASVAGVAVEEAGDLHALNAALE
                     ADRDCDLVLLDLNMPGGHGFSGLLLLRAQYPELPVMIISAIEDPKVIRRTFELGAAGY
                     LPKSVGPAEIRTAIDAVLAGGIFVPDGVNLAVDDEQAALARRLATLTPQQIRVLMMLS
                     DGLMNKQIAYELSISEATVKAHVSSILLKLDVDSRTQAVIAASRIEQGQFETLLT"
     gene            complement(2919..>3311)
                     /locus_tag="VHZ56_11995"
     CDS             complement(2919..>3311)
                     /locus_tag="VHZ56_11995"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4298733.1"
                     /translation="SLSGLRILCVDNERSVIDAMEGLLSGWGCDVRSARSLKDIDRDG
                     LLVGWLPDMVLMDYHLDQTSGLDAVEWLRHNVGGHLPAALVTADRTAAVRALAEERGI
                     PVVTKPVKPAALRAAISGLASQRPAGRR"
BASE COUNT          467 a         1171 c         1133 g          540 t
ORIGIN      
        1 gcgcgtccga tcagcgaatt gggggcgacc tcggcacgac ccggagtctg ccgttgcgcc
       61 gcgcggcggg cggcctcgat gaaggtgttg cggctcgatg tcgcgacgac cgggtggtcc
      121 gctaccggcc ggggggcagg agccggtgca tcgtccatga agccggcgct gggcatcggc
      181 gccggcggcg acgacggttg cagttcgaaa tccgaaggcg gcatcggcgc gacgggcgcg
      241 tcgtaccgcg cggcaagcga caaatcctcg tcgaggccgg gatgccgctt gcgcgatgcg
      301 gccttctcgt ccagcgcgct ctgcaccggg ccggccggct ccgggaacgg ttcggccgca
      361 agcggcgcct cggtggtggg gctgcgcggc atgctgtcga cccggcgccg caccggcggg
      421 gcagcactct cggtcgccgc aatgatcgtg gcgatgtcgg tcggccgcgc tctcgcgggc
      481 gcctcggcat cggtgaagtc gcgccgctcc agcagcgatg tctcgagccg cttcaggcgt
      541 tcattgacct cgctgatgcc cgcctgcatg tcgccgaaat cgccgatctc ggggtcgcgg
      601 tgcatctgct cgagcatcgc ggcgatccgc gcctcgagcc cgttgacggt gtcggcaagg
      661 atcggatcgg gcgtgccccg cacggcctcg gcggtccgcg ctgcgaccat ctcggccacg
      721 gcgtcgaaat cgggcatcgg cgccggtagc ggctcgctgg catagagtcg cgccagcccc
      781 gaaagctgct cccccgtctg gtccatgcgc gccaccagat ggcgcacctg cgcttcgagc
      841 tgcccgatcc ccggatcgat cggccgctcg ccgatgcgat cgccgagcat gccgatctgc
      901 cgccagatct cggccatgtc ctcgcgcgtg cccagcgtat ccatgcgttg ttcgagcgcg
      961 tcgaaacgcg ggccgatcgc gccgattacc gcgtcccgca gcgccgacag atccttgcgc
     1021 agcccgtgca gcaggcggtc gccggactcg atgtcggcga tgcgcgtgtt gagcgcgtcg
     1081 accagctcga cgaggtgcag cggctcctgc tggccttgct tgagcgtctc ggtgaagcgc
     1141 gccatctcgg ccaccacgtg gtcgaggtcc gatggcgaca gcgtcgagtg ccgctccagc
     1201 gcgtcgatgc gatcgtagac gttgcgcacg ctcgtctcga tcgagcgcat gccgtcctgg
     1261 aaggcctggg tgtccaccgg gttctgcacc cggtcggcat agccgacctg cagctcggcg
     1321 agcttgccga ccgtcgatgc cacgtcgtcg agccgccgcg tcagcgtccc gatatccatc
     1381 tcacggccct gcgccatgat cttgccgagg ctggcgatct gcccctcgag ccgcttcacc
     1441 tggccggtct cgccgacggc gccggccagc agttcgacga cgtgggcgag ctgcgccacc
     1501 tggtcggcga cgtccttgat gttcgtgccg gtcttgatct gtgccttgat ctcgccctcg
     1561 agccgttcga gccggcccgt cagtccattg aacgactgcg tcagccggtc gagcatcgcc
     1621 gtgtcgagcc gctgcgacgg cggcaccggc ggcggtgcgg gaggaggagc ggcctggcgc
     1681 gcttcgccct ggcgggcgcg gatctggttg atggcggact gcagggtatc gcgcgggttg
     1741 ggcgggcctg gcggcgccgg ctcctcgaag cgcgacagct gccgctgcac cgatcgaagc
     1801 gcctcgcgct ggcgcagcgc ggcgtcgtcg gcttcggcat agcgcggctc gcgcgtccgc
     1861 tcgggtgcgg gcggttgcgc ccgcgccacc tggttgtcga cggtgtcgag cagcgccacg
     1921 agctcctggc gaagcgactg ccactcggcc gggtcgcggc cgtagtcggc gggctgggac
     1981 tgctgatacg cgcgggccat gtgcggttcc caatcgcctg aaagatgccg cggcccaaat
     2041 cgggggccgg gcttagcctg cactcttaaa gaacatggta aagaaggcgt taagtccgat
     2101 gcaaattgca acatcgtcca cctcagtcct aagtggcatt ggttcggccc gaccgccctt
     2161 gctagaacaa atgagaagag agtgaaggcc gcatgagccg ccgcatcatc atcgtcgacg
     2221 accacccgct gttccgggcc gcgctgcgcc agaccctcgc cagcgttgcc ggggtcgcgg
     2281 tcgaagaggc cggcgaccta cacgctctca acgccgcgct cgaggccgac cgcgactgcg
     2341 acctcgtgct gctcgatctc aatatgcccg gcgggcacgg gttttccggc ctgctgctgc
     2401 tgcgggcgca gtatcccgag ctgccggtga tgatcatctc ggccatcgag gaccccaagg
     2461 tgatccgccg caccttcgag ctgggcgccg ccggttacct gcccaagtcg gtcggtccgg
     2521 ccgaaatccg gaccgccatc gatgcggtgc tcgccggcgg gatcttcgtg ccggacggcg
     2581 tcaatctcgc cgtcgacgac gagcaggcgg cgctggcccg ccggctcgcg accctcacgc
     2641 cgcagcagat ccgcgtgctg atgatgctga gcgacgggct catgaacaag cagattgcct
     2701 acgagctctc gatctcggag gcgaccgtca aggcccacgt ctcttctata ttgctgaagc
     2761 tcgacgtcga cagccgcacc caggccgtga tcgccgcgag ccgcatcgag cagggacagt
     2821 tcgaaacgct gctgacgtaa cagccgggat gggggcaata ccgctggccc ccatctcgca
     2881 atcccggtcc cgcccgcctg tcggcaaaga caatcgtcct accgccgccc tgccggccgc
     2941 tggctggcga gcccgctgat cgccgcccgc agcgccgccg gcttcaccgg cttggtcacc
     3001 accgggatgc cgcgttcctc ggccagcgcg cggactgcgg ccgtgcggtc ggcggtcacc
     3061 agcgcggcgg gcagatgtcc gcccacattg tgccgcagcc actcgaccgc atcgagcccc
     3121 gaggtctggt cgaggtggta gtccatcagc accatgtcgg gcagccagcc caccagcaat
     3181 ccgtcgcggt cgatgtcctt gagcgagcgg gccgagcgca cgtcgcatcc ccagccgctg
     3241 agcaatcctt ccatcgcgtc gatcaccgac cgctcgttgt cgacgcagag gatccgcagc
     3301 ccgctcaggc t
//
LOCUS       DATAZA010000479         2476 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2973169, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000479 DATAZA010000000
VERSION     DATAZA010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2476
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2973169"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..269)
                     /locus_tag="VHZ56_12000"
     CDS             complement(<1..269)
                     /locus_tag="VHZ56_12000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020812859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX4298734.1"
                     /translation="MKFTRLKLHGFKSFSDVTELYLEPGLTGVVGPNGCGKSNLVEAL
                     RWVMGESSYKAMRASGMDDVIFSGSGNRPARNSAEVTLVLDNADRT"
     gene            complement(367..1176)
                     /locus_tag="VHZ56_12005"
     CDS             complement(367..1176)
                     /locus_tag="VHZ56_12005"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEX4298735.1"
                     /translation="MNLTRRETLTLAAAATVVAAAGLPSLAFAKDGDTVDQLKLMATA
                     IPDKVDGNAAAKVTFIEYASPTCPHCAEFSNTVIEPFKQKYVATGKVKFILRPFARNT
                     MDAAIFMLAEAAAKSVNGQGSTASSAPADASSSAPAASSDASSASSMAAASSAAAPAD
                     PNNPSGYSPAAIAAYENVIATYFKTQDTWGVSDKPLDAVKAVAVQLGFSDDSFTAALK
                     DQDLFNAIEKMRDQAVNDFGLEGTPTFYLNGLQMTGEKTLDQLSAAIDPLL"
     gene            complement(1240..1758)
                     /locus_tag="VHZ56_12010"
     CDS             complement(1240..1758)
                     /locus_tag="VHZ56_12010"
                     /inference="COORDINATES: protein motif:HMM:NF017103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HEX4298736.1"
                     /translation="MAKAKEPEEPRRLNRAVGVGEALNGVLDTALRKRGFATRDVLTR
                     WTAIAPKPYDAVAVPDQLKWPRGAGHEGATLYLRCAPGHALALSHEAPLIVAAVNRYF
                     GYFLVREVRLSAEPMVATKKKPGPPAALPGSAAAARTAAAGVEDAGLRTALESLGTGV
                     LGRKTRNSVTKA"
     gene            1806..>2476
                     /locus_tag="VHZ56_12015"
     CDS             1806..>2476
                     /locus_tag="VHZ56_12015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEX4298737.1"
                     /translation="MPKAHALQQHAPLDGAALLAWYDRHARVLPWRTGPADRARGVRP
                     DPYRVWLSEIMLQQTTVAAVGKYYARFLSLWPTVADLAAAPLEAILVEWAGLGYYARA
                     RNLHACAQAVVERFGGAFPGTSAELLALPGIGPYTAAAIAAIACDEPVAVVDGNVDRV
                     LARYLALPVPVRDAKDVIRAAVQAAVPPRAGDFAQALMDLGATICAPRIANCLICPLA
                     EGCTGR"
BASE COUNT          358 a          892 c          801 g          425 t
ORIGIN      
        1 gtgcggtcgg cattgtcgag caccagcgtc acttccgccg aattgcgcgc cggccggttg
       61 cccgagcccg aaaagatcac gtcgtccatg cccgaggcgc gcatcgcctt gtacgagctt
      121 tcgcccatca cccagcgcag cgcttcgacg aggttggact tgccgcagcc gttcggcccg
      181 accacgcccg tcaggcccgg ctcgagatag agctcggtca cgtccgaaaa ggatttgaag
      241 ccgtgcagct tgaggcgggt gaacttcatg agtctcagat aaccaagcgg cccgccgcgc
      301 ggaagcggcg agccgggttt ctgggctcaa gactgtggaa agccccgcca gtgcgaccga
      361 aaagactcag agcagcgggt cgattgcggc cgaaagttgg tcgagggtct tctcgccggt
      421 catctgcagc ccgttgagat agaaggtcgg cgtaccctcg aggccgaaat cgttgaccgc
      481 ctggtcgcgc attttctcga tggcgttgaa caggtcctgg tccttcagcg ccgcggtgaa
      541 gctgtcgtcc gaaaagccga gctgcaccgc cacggccttc accgcgtcga gcggcttgtc
      601 cgaaacgccc caggtgtcct gcgtcttgaa ataggtggcg atgacgttct cgtaggcggc
      661 gatcgccgcc ggcgaatagc cgctcggatt gttcggatcg gccggcgccg ccgccgagct
      721 ggcggccgcc atcgagctcg ccgacgaagc atccgagctc gccgccggcg cgctcgacga
      781 ggcgtcggcc ggtgcgctgc tcgccgtcga gccctggccg ttcaccgatt tcgccgcggc
      841 ttccgccagc atgaagatcg ccgcgtccat ggtgttgcgc gcgaacggcc tgaggatgaa
      901 cttcaccttc ccggtggcca cgtatttctg cttgaacggc tcgatcacgg tgttggagaa
      961 ttccgcgcag tgcgggcagg tgggcgacgc gtattcgatg aacgtcacct tcgccgcggc
     1021 attgccgtcg accttgtcgg gaatggccgt ggccatcagc ttcagctggt cgacggtgtc
     1081 gccatccttg gcgaacgcca gcgacggcag gcccgcggcg gccacgactg tggcggcagc
     1141 ggccagggtc aaagtctcac gacgggtcag gttcacggca gaactccttg ttttgcgggc
     1201 aacttacaca cgcaaggaag cgcggcaagt gtcgaaacct taagctttgg tcacgctgtt
     1261 gcgagttttg cgcccgagca cgcccgtgcc gagcgattcg agcgccgtcc tgaggccggc
     1321 atcctcgacc ccggcggccg ccgtccgcgc cgctgcggcg ctgccgggca gggcggccgg
     1381 tggccctggc tttttcttcg tcgcgaccat tggttcggcg ctgagccgca cctcacgcac
     1441 caggaaatag ccgaaatagc ggttgaccgc cgccacgatc agcggcgcct cgtggctcag
     1501 cgccagcgcg tgcccgggcg cgcagcgcag atacagcgtc gccccctcgt gcccggcgcc
     1561 gcgcggccat ttcagctgat cgggcaccgc caccgcgtcg tagggcttgg gggcgatcgc
     1621 cgtccatcgg gtcaagacgt cccgcgtggc aaagccgcgt ttccggagcg ccgtgtcgag
     1681 caccccgttg agcgcctcgc cgacgccgac cgcgcggttg agccgtcgcg gctcctctgg
     1741 ctcctttgcc ttggccaatc gcaaatcccg ttgcgccggt cgcccggctg gttcatgccg
     1801 ccatcatgcc aaaagcccac gctttgcaac agcacgcacc gctcgacggc gccgcgctgc
     1861 ttgcgtggta cgatcgccac gcccgcgtcc tgccctggcg caccggcccc gccgaccgcg
     1921 cccgcggcgt ccgccccgat ccctatcgcg tctggctcag cgaaatcatg ctgcagcaga
     1981 ccaccgtcgc cgccgtcggc aagtactacg cccggttcct gagcctctgg ccgacggtgg
     2041 cggacctcgc tgccgctccg ctcgaggcca tcctcgtcga atgggccggg ctcggctact
     2101 acgcccgcgc ccgcaatctc cacgcctgtg cgcaggcggt ggtcgaacgc ttcggcggcg
     2161 ccttccccgg cacctccgcg gaactgctgg cacttcccgg catcggcccc tacaccgccg
     2221 ccgccatcgc tgccatcgcc tgcgacgagc ctgtcgccgt cgtcgacggc aacgtcgacc
     2281 gcgtgcttgc ccgctatctc gctttgccgg tgccggttcg cgacgccaag gacgtcatcc
     2341 gcgccgcggt gcaggcggcc gttccgccgc gcgccggcga tttcgcccag gcgttgatgg
     2401 atctcggcgc caccatctgc gcgccgcgca tcgccaattg cctgatctgc ccgctggccg
     2461 agggctgcac cggccg
//
LOCUS       DATAZA010000480         5104 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1231419, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000480 DATAZA010000000
VERSION     DATAZA010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5104
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1231419"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1009)
                     /locus_tag="VHZ56_12020"
     CDS             complement(<1..1009)
                     /locus_tag="VHZ56_12020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX4298738.1"
                     /translation="MADLHTHRAVEAVWRIEAARLVAGLAKMTRDVGLAEELAQDALV
                     IALAQWPQDGIPANPGAWLMQTAKRRAIDQFRRRKMVAGKMPGLTYEAELREQEAPDD
                     ERRLDDDVKDNLLSLIFTACHPMLSPEARSALTLRLVGGLSTAEIARAYLVPEPTIQQ
                     RIVRAKKTLAEAHVPFEVPRGEERLRRLGSVLEVLYLIFNEGYSATAGEDWMRPDLAN
                     EAMRLARMLAALAPDEPEVLGLQGLLELQGSRMTARLDEYGAPVLLEAQDRTRWDQLL
                     IKRGLAALRQAELLAARGKPVGKYFLQASIAAQHARAKRAEDTDWRRIAALYDVLAGA
                     AP"
     gene            complement(1056..1475)
                     /locus_tag="VHZ56_12025"
     CDS             complement(1056..1475)
                     /locus_tag="VHZ56_12025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEX4298739.1"
                     /translation="MHFMVIRKADAQTEAGVLPSAKVIDDMQAYNEKLVRSGQMKDGG
                     GLMASSRGARVSFSNGKPTVIDGPFAEAKELIAGYSIIEAASLAEVVELVKHWPSEDG
                     QGNVQIEIRQLFTVDDLAFSDEQKARYARLEQGAQQQ"
     gene            complement(1576..1935)
                     /locus_tag="VHZ56_12030"
     CDS             complement(1576..1935)
                     /locus_tag="VHZ56_12030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEX4298740.1"
                     /translation="MRFMVIVKSDPILEQTMPTREAFAAMGKYNQTLRDAGVLLALDG
                     LSSSKDGARVTFSGNKPTVKDGPFTEAKELVAGFWIIQVRNKEEAVEWAKRIPFSNGE
                     SVEVRRISEAADFADIM"
     gene            1964..2230
                     /locus_tag="VHZ56_12035"
     CDS             1964..2230
                     /locus_tag="VHZ56_12035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298741.1"
                     /translation="MPALKTRRRRFHGIDTRSKKRRQHVVAGGGPASFCTPGVKEFDL
                     RVGGRWRFAAQGAAGRAPGEDELTKVVSDMTMARDSRAGGPDGG"
     gene            complement(2237..4051)
                     /locus_tag="VHZ56_12040"
     CDS             complement(2237..4051)
                     /locus_tag="VHZ56_12040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX4298742.1"
                     /translation="MHLPGLGQRRRQSLRDHGAEFVDALWAAQPAAVYAPDRTLVDAN
                     PMFLEVCGYALAEIRGKSHDVFVDAATRDSADYKALWDAVLKGEPRTGEYPRQSKGGE
                     ETFLHASYIPVRDRRGRVISVVQVAFNITRQLRWRFDAIGRLAAIDKAQAIAEFDLDG
                     RVLTANENFCRAVGYGLDEIKGRHHRMFLDPAEAAGADYARFWDELRAGRGNSGEYRR
                     IGKGGREVRMQASYTPILDVHGKPYKIVKYATDATDATARKQAVTVLGEQLSRLAEGD
                     LTASIDETFAGDIEKVRLAFNATVARMRDIVGRLRAASSTLKIATNEILSGANDLADR
                     TGKQAAAVEETSAALEQLSATVSDNAERAASASSKARAVSQIAAETNGVMKQANDAME
                     RISTSSTKISNIIGLIDDIAFQTNLLALNASVEAARAGDAGKGFAVVAVEVRRLAQSA
                     AGASAEVKALIEQSSTEVATGSRRVAEATGKVTSMLEGIHDNSVLIEEITTATSEQST
                     AIDELTSSVKQVDEMTQHNAALVQQTNASIERTEGQAIELDRIVDVFVLGEAPAARPK
                     APAARAAARPRPAMPNRVARSYGPQGNTALKDDDWNEF"
     gene            complement(4142..>5104)
                     /gene="thrS"
                     /locus_tag="VHZ56_12045"
     CDS             complement(4142..>5104)
                     /gene="thrS"
                     /locus_tag="VHZ56_12045"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEX4298743.1"
                     /translation="MALKPMNCPAHIQIFNQGTKSYRDLPMRLAEFGCCHRNEAHGAL
                     HGLLRVRQMTQDDAHIFCTEEQIQAETEKFVHLLYSVYEDMGFDNVVIKLATRPEKFG
                     GTIERWNAAEKSLGDALRATGYDFVIAEGEGAFYAPKLEFHLKDAIGRSWQVGTLQLD
                     YVLPERLDATYVAEDGTRHYAVMLHRAILGSLERFIGMMIEHYAGKMPMWLAPVQVVV
                     ATIVSDADAYAEKLVKQLRDAGIRAELDVRNEKINYKVREHSVQKVPLMFVVGKREAE
                     EGTVSVRRLGTEGQKVLPATAAIVELMAEATPPDLKRVPAAKAA"
BASE COUNT          741 a         1734 c         1705 g          924 t
ORIGIN      
        1 ccggcgctgc accggccagg acgtcgtaga gggccgcgat ccgacgccag tcggtgtcct
       61 cggcccgctt cgcgcgagcg tgctgcgcgg cgatcgacgc ttgcaggaag tatttcccga
      121 ccggctttcc acgggcggcc agcagctcgg cctgccggag ggcggccagc ccgcgcttga
      181 tcagcagctg gtcccagcgc gtgcggtcct gcgcctccag caagaccggt gcgccgtact
      241 cgtcgagccg ggcggtcatc cgcgagccct gaagctccag caacccttgc agcccaagga
      301 cttcgggctc gtcgggagcg agggcggcca gcatccgtgc caggcgcatc gcctcgttgg
      361 ccagatccgg gcgcatccag tcctcgcccg cggtggccga atagccctcg ttgaagatca
      421 gatagagcac ctccagcacc gagcccagcc ggcgcaggcg ctcctcgcca cgcggcacct
      481 cgaacggcac gtgcgcctcg gcaagcgttt tcttggcgcg cacgatgcgc tgctggatgg
      541 tcggctcagg aaccaggtag gcacgcgcga tctcggccgt gctcagcccg cccaccagcc
      601 gcagcgtcag ggcgctgcgc gcctcggggc tgagcatggg atggcaggcg gtgaagatca
      661 ggctcagcaa attgtccttc acatcgtcgt cgaggcgccg ctcgtcgtcg ggcgcctcct
      721 gttccctgag ttcggcttcg taggtcaggc ccggcatttt tccggccacc atcttcctgc
      781 ggcggaactg gtcgatggcg cggcgcttgg cggtctgcat cagccaggcg ccggggttgg
      841 cgggaatgcc gtcctgcggc cattgcgcca gcgcgatcac cagcgcgtcc tgcgccaact
      901 cctcggccag cccgacgtcg cgggtcattt tggcgaggcc ggcgaccagt ctcgccgctt
      961 cgatgcgcca gaccgcttcg acggcgcgat gggtatgaag atcggccatg agcggcggag
     1021 tggatcaaat ccgctccgcc gccgcaagcc ggcgcctatt gctgctgtgc gccctgctcg
     1081 agcctggcgt agcgcgcctt ctgctcgtcg ctgaaggcga gatcgtccac cgtgaacagc
     1141 tggcggattt cgatctggac gttgccttgg ccatcctcgg acggccagtg cttcaccagc
     1201 tcgacgactt cggcgagcga ggccgcttcg atgatcgaat atcccgcgat cagttccttc
     1261 gcctcggcga acgggccgtc gatgaccgtc ggcttgccgt tgctgaagct cacccgggcg
     1321 ccgcgcgacg acgccatcag gccgccgccg tccttcatct ggccggaccg gaccagcttt
     1381 tcattatagg cctgcatgtc gtcgatcacc ttggcgctgg gcagcacccc ggcttcggtc
     1441 tgggcgtcgg ctttgcggat caccatgaaa tgcatcgttg tctccttgcg gttgtcaggt
     1501 gtcgggggat cgaaaggcct ggcgggactt ccatgcatca aggcctcaag ctcgctggga
     1561 cgccagatgg tccggctaca tgatgtcggc gaagtcggcg gcctccgaga tgcggcggac
     1621 ctcgaccgac tcgccgttgc tgaacgggat gcgcttggcc cactccaccg cctcctcctt
     1681 gttccggacc tggatgatcc agaagccggc gaccagctcc ttggcctcgg tgaacggccc
     1741 gtccttcacg gtcggcttgt tgccgctgaa ggtgacgcgg gcgccgtcct tgctcgacga
     1801 caggccatcc agcgccagca gcacgccggc gtcgcggagc gtctggttgt attttcccat
     1861 ggccgcgaac gcctcgcggg tcggcatcgt ctgctcaagg atcgggtcgc tcttcacaat
     1921 gaccataaag cgcatttcgg ttctccgcgg ttcggccggc attatgcccg ccctgaagac
     1981 acgacgaagg cggtttcacg gaatcgacac ccggtcgaaa aaaagacggc agcacgtcgt
     2041 cgctggtggg ggaccggcga gcttctgcac tcctggcgtc aaagaattcg atttgcgcgt
     2101 cggcgggcgc tggcgcttcg ccgctcaagg cgctgctggc cgagctccgg gggaggacga
     2161 attgaccaag gtcgtcagcg acatgaccat ggcgcgcgac agccgcgccg gcggcccgga
     2221 cggcggctga cgccgctcag aactcgttcc agtcgtcgtc cttcagcgcc gtgttgccct
     2281 gcgggccgta gctgcgcgcg acgcgattgg gcatggccgg ccgcggccgc gcggcagcac
     2341 gagccgccgg tgccttcggt cgcgccgccg gcgcctcgcc cagcacgaag acatcgacga
     2401 tgcggtcgag ctcgatggcc tgaccctcgg tgcgctcgat cgaggcgttg gtctgctgca
     2461 ccagcgcggc attgtgctgg gtcatctcgt cgacctgctt gacagacgag gtcagctcgt
     2521 cgatcgccgt cgactgctcg ctggtggcgg tggtgatctc ctcgatcagc accgaattgt
     2581 cgtggatgcc ctcgagcatc gaggtgacct tgccggtcgc ttcggcgacc cggcggctgc
     2641 cggtggcgac ttcggtcgag gattgctcga tcagcgcctt gacctcggcc gaggcgcctg
     2701 ccgccgattg cgccaaccgg cgcacctcga cggcgaccac cgcaaatccc ttgcccgcgt
     2761 cgccggcccg cgccgcctcg acgctggcgt tgagggccag caggttggtc tggaaggcaa
     2821 tgtcgtcgat caggccgatg atgttggaga tcttggtcga agacgtcgag atgcgctcca
     2881 tcgcgtcgtt ggcctgcttc atcacgccat tggtttcggc ggcgatctgc gacaccgccc
     2941 gcgctttcga gctggccgag gcggcgcgtt cggcgttgtc cgataccgtg gcggaaagct
     3001 gttccagtgc ggccgaagtt tcctcgacgg ccgccgcctg cttgccggtg cggtcggcca
     3061 ggtcgttggc acccgacagg atttcgttgg tcgcgatctt cagcgtgctg gaggcggcgc
     3121 gcaaccggcc gacgatgtcc cgcatgcgcg ccacggtggc gttgaaagcc agccgcacct
     3181 tctcgatgtc gccggcgaag gtctcgtcga tcgaggcagt gaggtcgccc tcggccagcc
     3241 gcgacagctg ctcgccgagc acggtgaccg cctgcttgcg ggcggtggcg tcggtagcgt
     3301 cggtggcata tttgacgatc ttgtacggct tgccgtggac atcgaggatc ggggtgtagg
     3361 acgcctgcat gcgcacttcg cggccgccct tgccgatgcg gcggtattcg ccggaattgc
     3421 cgcggccggc ccgcagttcg tcccagaacc gtgcgtagtc cgcgccagcg gcctccgccg
     3481 gatcgaggaa catgcgatgg tggcgcccct tgatctcatc gaggccgtag ccgacggcgc
     3541 gacagaaatt ctcgttggcg gtcagcaccc gcccgtcgag gtcgaactcg gcgatggcct
     3601 gcgccttgtc gatggcggcg agccggccga tggcatcgaa ccgccagcgc agttgtcggg
     3661 taatgttgaa ggcgacctgc acgacgctga tgacccggcc gcgccggtcg cgcaccggaa
     3721 tgtagctggc gtggaggaac gtctcttcgc cgcccttgga ctggcgcggg tattcgccgg
     3781 tccgcggttc gcccttgaga acggcgtccc acagcgcctt gtaatcggcg ctgtcgcggg
     3841 tcgcggcatc aacgaagacg tcatgcgact tgccgcggat ttcggcgagg gcgtagccgc
     3901 agacttcgag gaacatcggg ttggcgtcga ccagggtgcg gtcgggcgca tacacggcgg
     3961 ccggctgcgc cgcccagagc gcgtcgacga attccgcgcc atgatcgcgc agcgactgcc
     4021 gtcgcctttg gcccagccca ggcagatgca tcgccgatcc ccgctttgtc tggcggcaat
     4081 gatggcccgc tatggctaag aactggtgaa cgcggccgcc tgggacggcc gcgctccagc
     4141 gtcatgcggc ctttgcggcc ggcacgcgct tcaggtccgg cggggtcgct tcggccatga
     4201 gctcgacgat cgccgccgtc gccggcagca ccttctggcc ctcggtcccg agccggcgga
     4261 cggagaccgt cccctcctcc gcctcgcgct taccgaccac gaacatcagc ggcaccttct
     4321 gcaccgagtg ctcgcggacc ttgtagttga tcttctcgtt gcgcacgtcg agctcggccc
     4381 ggataccggc atcgcgcagc tgcttcacca gcttttcggc ataggcatcg gcgtccgaga
     4441 cgatggtcgc gaccaccacc tgcaccggcg ccagccacat cggcatcttg ccggcgtagt
     4501 gctcgatcat catgccgatg aagcgctcga gcgatccaag gatcgcccga tgcagcatca
     4561 cggcgtaatg ccgcgtgccg tcctcggcga cataggtcgc gtccagccgc tcgggcagca
     4621 cgtagtcgag ctgcagcgtg cccacctgcc agctgcggcc gatggcgtcc ttcaggtgga
     4681 actcgagctt gggcgcgtag aacgctccct cgccctcggc gatgacgaag tcgtagccgg
     4741 tggcgcgcaa ggcgtcgccc agcgacttct ccgccgcatt ccagcgctcg atggtgccgc
     4801 cgaacttttc cggccgcgtc gcgagcttga tgacgacatt gtcgaagccc atgtcctcgt
     4861 agaccgaata cagcaggtgg acgaacttct ccgtctcggc ctggatctgc tcctcggtgc
     4921 agaagatgtg ggcatcgtcc tgcgtcatct gccgcacgcg cagcaggccg tgcagcgcgc
     4981 cgtgcgcctc gttacggtgg cagcagccga actcggccag ccgcatcggc aggtcgcggt
     5041 agctcttggt gccctggttg aagatctgga tatgcgccgg gcagttcatc ggcttcagcg
     5101 ccat
//
LOCUS       DATAZA010000481         1967 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3785986, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000481 DATAZA010000000
VERSION     DATAZA010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1967
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3785986"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1967
                     /locus_tag="VHZ56_12050"
     CDS             <1..>1967
                     /locus_tag="VHZ56_12050"
                     /inference="COORDINATES: protein motif:HMM:NF024939.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase TIM-barrel-like
                     domain-containing protein"
                     /protein_id="HEX4298744.1"
                     /translation="HYDRPMGAQSGSPTAWLAQSKPIRLTELGCPAIDKGANQPNVFL
                     DPKSAESTAPYFSNGAPDALAQRQVLRAMLAYWADSANNPASTVYAGPMLERTYLWTW
                     DARPYPAFPALTDVWSDGVNHPTGHWLTGRIGGLASDELVAAIATDFGFTVGMADAVP
                     PFVQGFVVNGPSTGRAALEQLFSVSGLDVHDAPDGLVVAATRTRDAVDIGDVGADDLP
                     MISRRRPDPGDAVGQVALGYADRERSYLSGTATAIAPGGGAFSSTGSDFTLDLGSARS
                     AAEHLLLEQLAAPDMLNFAAPPSLLALEVGDAIALAGQAGGPFAITEIRDGLGRTITA
                     QTIPPTLAAASLSSRPARGDVAVVPAAAPELDIALLPPATTDVTRPQLALGAFAQPWP
                     GAIAVTDDATGSSVASLSGSATLGVLTGALAAGSIFVWDDINAIELTVYSGHLSSRDD
                     DEVLAGANRIAVATDAGDWEVIGFANADLIGPQSYRLTRLLRGQMGTDWAIGPAAAGN
                     AVLLLDSRATLLPVSPAWLGTTVDLRSFAGPADAVGEVTELALGLDPVLPLAPVHVNA
                     LRRPGSSDVALAWVRRSRSDTDSWAADDAPLDCVPEAYRVTIYNGLSVVRSLDVSSPA
                     TTYTAAQQTTDFGSPPTGFSFTVAQTSPLYGP"
BASE COUNT          270 a          727 c          694 g          276 t
ORIGIN      
        1 cattacgacc ggccgatggg cgcgcagagc ggctcaccga ccgcctggct ggcgcagtcc
       61 aaaccgatcc ggctgaccga gctgggctgt cccgccatcg acaagggcgc caaccagccc
      121 aatgtgttcc tcgaccccaa gagcgccgag agcaccgcgc cgtatttctc gaacggcgcg
      181 ccggacgcgc tggcgcagcg gcaggtgctg cgcgccatgc tcgcctactg ggccgacagc
      241 gccaacaatc ccgcctcaac ggtctacgcc ggcccgatgc tggagcggac ctatctgtgg
      301 acctgggacg cccggccgta tccggcgttt ccggcgctga ccgatgtgtg gagcgacggc
      361 gtcaaccatc cgaccggcca ctggctgacg ggccggatcg gtggcctggc gagcgacgag
      421 ttggtcgctg cgatcgccac cgatttcggc ttcacggtcg gcatggccga cgccgtgccg
      481 ccgttcgtgc agggcttcgt ggtcaatggg ccgtcgaccg ggcgggccgc actggaacag
      541 ctgttcagcg tcagcggcct cgacgtgcac gacgcgccgg acgggctcgt ggtcgcggcg
      601 acacggacgc gggacgcggt ggacatcggc gatgtcggcg ccgacgattt gccgatgatc
      661 tcgcgccggc gccccgatcc gggcgatgcc gtggggcagg tggcgctggg ctatgccgac
      721 cgcgaacgca gctatctgag cggcacggcg accgccattg cgcccggcgg cggagcgttc
      781 tcgagcaccg gttcggattt caccctcgac ctcggcagcg cccgcagcgc cgccgagcat
      841 ctgctgctcg agcaactcgc cgcgcccgac atgctgaact tcgccgcgcc accgtcgctg
      901 ctggcgctcg aggtcggcga cgcgatcgcg cttgccgggc aggccggcgg gccgttcgcc
      961 atcaccgaga tccgcgacgg cctcggccgg acgatcacgg cacagaccat cccgccgacg
     1021 ctggccgccg cgagcctgag cagccggccg gcccgcggcg acgtcgcggt ggtgcccgcg
     1081 gcggcgccgg agctcgatat cgccctgctg ccgccggcga cgaccgatgt cacccgcccg
     1141 caactggcgc tcggcgcctt cgcccagccc tggccgggcg ccatcgcggt gaccgacgat
     1201 gcaaccggca gcagcgtggc gagcctcagc ggcagcgcga cgctgggcgt gctgaccggc
     1261 gcgctggcgg ccggctcgat cttcgtctgg gacgacatca acgcgatcga gctgacggtc
     1321 tattccgggc acctgtcgtc gcgcgacgac gacgaggtgc tggccggcgc caaccgcatc
     1381 gcggtcgcca ccgacgccgg cgactgggag gtgatcggct tcgccaacgc cgacctgatc
     1441 ggaccgcaga gctatcgcct gacgcggctg ctgcgcggcc agatgggcac cgactgggcg
     1501 atcggcccgg ccgcggcggg caatgccgtg ctgctgctcg acagccgcgc cacgctgctg
     1561 ccggtgtccc ccgcctggct cggcacgacg gtcgacctgc gcagtttcgc cggaccggcc
     1621 gatgcggtgg gcgaggtgac cgaactggcg ctcgggctcg atccggtgct gccgctggcg
     1681 ccggtgcacg tcaatgcact gcggcgcccg ggcagcagcg acgtggcgct ggcctgggtc
     1741 cgccgcagcc ggtccgatac cgacagctgg gccgccgacg acgcgccgct cgattgcgtg
     1801 cccgaggctt atcgcgtgac catctacaat ggcctttcgg ttgtccgctc gctcgatgtg
     1861 tcgagcccgg ccacgaccta caccgcggcg cagcagacga ccgatttcgg cagcccgccg
     1921 acgggcttca gcttcaccgt ggcgcagacc agcccgctct acggacc
//
LOCUS       DATAZA010000482         1799 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_188126, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000482 DATAZA010000000
VERSION     DATAZA010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1799)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1799)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1799
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188126"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..894)
                     /gene="cobT"
                     /locus_tag="VHZ56_12055"
     CDS             complement(<1..894)
                     /gene="cobT"
                     /locus_tag="VHZ56_12055"
                     /EC_number="2.4.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008939 -
                     nicotinate-nucleotide-dimethylbenzimidazole
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide--dimethylbenzimidazole
                     phosphoribosyltransferase"
                     /protein_id="HEX4298745.1"
                     /translation="MSAPFAEITDLLMLVPEGSEAAVAAVRQHDAQLTKPPGSLGRLE
                     MLVEWLARWQGRGEPTLDNPMVAIFAGNHGVTDQGVSAFPRAVTAQMVANFTDGGAAI
                     SQICALHEFNLRVFELALEVPTGDITQTVAMDDKTCAATIAYGMEAIAGKPDCLAIGE
                     MGIGNTTVAAAVYAALYGGTGADWVGRGTGVDNAGLARKADAVERALQLHKDAIGDPL
                     AVLARLGGREIAAMLGALVAARHQKIPVIVDGFVATAAAAVAQAVNPAAIDHCIFAHV
                     SAESAHRRALEAMGVTPLLDLG"
     gene            1074..>1799
                     /locus_tag="VHZ56_12060"
     CDS             1074..>1799
                     /locus_tag="VHZ56_12060"
                     /EC_number="2.7.8.26"
                     /inference="COORDINATES: protein motif:HMM:NF014685.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008818 - cobalamin 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0051073 - adenosylcobinamide-GDP
                     ribazoletransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HEX4298746.1"
                     /translation="MTDASPGPDGPRPANENRPAPAELRLGDDLLMGVRFYSRLPTGT
                     RPHLKPNLTRMAMALPFASLVIGALPAALLLGLEWLGVAHLFAAALAVGAVVTLTGAM
                     SEDALADAADGLFGGPTIEERLAIMKDSRHGTYGVCAIVLLIGLRITAIGSIANPLAA
                     AGLFLAASLMARSGALWLSVALPAARSGGASAGAGALSRQGFGIGAVFMVVLSFCLAG
                     FAVGVLGLVLAYGLGALVIWGWTT"
BASE COUNT          220 a          593 c          705 g          281 t
ORIGIN      
        1 gccgagatcg agcagcgggg tcacgcccat ggcctcgagc gcgcggcgat gggctgactc
       61 ggccgaaacg tgggcgaaga tgcagtgatc gatggcggcc gggttgacgg cctgcgccac
      121 ggcggccgcc gcggtcgcga cgaagccgtc gacgatgacg ggaatcttct ggtggcgggc
      181 cgccaccagc gcccccagca tggcggcgat ctcgcggccg ccgaggcggg cgagcacggc
      241 gagcggatcg ccgatagcgt ccttgtgcag ctgcagggcg cgctcgacgg catcggcctt
      301 gcgggcgagc ccggcattgt cgacgccggt gccgcgaccg acccagtcgg cgccggtgcc
      361 gccgtagagc gcggcgtaga cggcggcggc gacggtggtg ttgccgatgc ccatctcgcc
      421 gatggcgagg cagtcgggct tgccggcgat cgcttccatg ccgtaggcga tggtggcggc
      481 gcaggtcttg tcgtccatgg cgacggtctg ggtgatgtcg ccggtcggca cctccagtgc
      541 cagttcgaat acccgcagat tgaactcgtg cagcgcgcag atctgcgaga tggcggcgcc
      601 gccgtcggtg aaattggcaa ccatctgtgc cgtcaccgcg cgcgggaagg cgctgacgcc
      661 ctggtcggtg acgccgtggt tgccggcaaa gatcgcgacc atcgggttgt cgagggtggg
      721 ctcgcccctg ccctgccagc gcgccagcca ttcgacgagc atttcgagcc tgccgagcga
      781 gcccggcggc ttggtcagct gcgcgtcgtg ctggcgcact gcagcgacgg ctgcctcgct
      841 gccctcgggc acgagcatca ggaggtcggt gatttcggcg aagggagcgg acattcggag
      901 accccgtcaa tgggcggtct tcatggccta aatccgggga tcgggatagt cccggaggcg
      961 gcccggccgt ggtccggtgg cgagcggctc cggcgacagg cgccccgggc gtgcaggcgg
     1021 cgcttgcctt gctgccggcg gtggtgggac aaggccagcc tgggagggtg caattgaccg
     1081 atgcttcgcc gggccccgac ggcccgcgcc ccgccaacga gaaccggccg gcgcccgccg
     1141 agctccggct gggcgacgat ctgctgatgg gggtgcggtt ctattcgcgg ctgccgaccg
     1201 ggacgcggcc gcacctcaag ccgaacctga cgcggatggc gatggcgctg cccttcgcca
     1261 gcctggtcat cggcgctctg ccggcggcgc tgctgctcgg gctcgagtgg ctgggggtgg
     1321 cgcatctgtt cgcggcggcg ctggcggtcg gcgccgtggt gacgctcacc ggcgcgatga
     1381 gcgaggacgc gctggccgac gcggccgacg ggctgttcgg cggcccgacg atcgaggaac
     1441 gcctcgccat catgaaggac agccggcacg gcacctatgg cgtctgcgcc atcgtgctgc
     1501 tgatcgggct gcgcatcacc gccatcggct cgatcgccaa cccgctggca gcggcggggc
     1561 tgttcctcgc cgcgtcgctg atggcacggt ccggcgcgct gtggctgagc gtagcgctgc
     1621 ccgccgcgcg cagcggcggc gcctcggccg gcgccggcgc actgtcgcgg caggggttcg
     1681 ggatcggcgc ggtgttcatg gtggtgctga gtttctgcct cgccggcttt gcggtcgggg
     1741 tgcttgggct ggtgcttgcc tacgggctcg gcgcgctggt catctggggc tggacgacg
//
LOCUS       DATAZA010000483         1997 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2973974, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000483 DATAZA010000000
VERSION     DATAZA010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2973974"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(121..1116)
                     /gene="nadE"
                     /locus_tag="VHZ56_12065"
     CDS             complement(121..1116)
                     /gene="nadE"
                     /locus_tag="VHZ56_12065"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013525354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HEX4298747.1"
                     /translation="MLHVLPEFSADALQVDAARETDRIVAALRTQLRSIRRRGLVLGL
                     SGGIDSSVSVALAVRAVGARNVQALLMPERDSDPESRRLGELVAATFGIEPMVEDIGP
                     TLDALGCYARRDAAVRSVVPDYGAGWACKVVIGQSAGGDGYNISSLVVRAPDGTQTTH
                     RLPLAAYLGVVAATNMKQRTRKQFEYYHADRLNFAVLGTPNRLEYDQGFFVKNGDGAA
                     DVKPIAHLYKSQVYALAEYLGVPEEIRRRPPTTDTYSLPQSQEEFYFALPYGLMDLCL
                     YGLNHGVAAEAVAAAAKLTEAQVHHVWRDIAAKRKATQPLHAAPLLVEPVREVEA"
     gene            complement(1116..>1997)
                     /locus_tag="VHZ56_12070"
     CDS             complement(1116..>1997)
                     /locus_tag="VHZ56_12070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013850380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX4298748.1"
                     /translation="AIKVGATLVLEKSFAFPAAEFEVMARERVTAFPLVPTIAALLLQ
                     QSELPPAAFAHLRYMTNAAAPLPAAHVARLRELLPAVDFYSMYGQTECTRATYLPPAE
                     IDSRPGSVGIAIPGSRAWVVDSQGHHAPPGATGELVIRGPNVMQGYWQNPLASARAVR
                     PDRDTGQPVLFTGDLFYADEDGFLYFVSRRDDIIKTRGEKVAPREVETALHAIPGVAE
                     AVVLGVPDAVLGQAIKAIVVRSDPALTEQQVLRACARTLEDFMVPKSVEFRTSLPKTE
                     SGKVSRRLVRQSLEPVV"
BASE COUNT          305 a          630 c          756 g          306 t
ORIGIN      
        1 cggtcacgcc ttcgaccgag gcgatcaaca ggctgagggt ggtgcggccg acgaccggcg
       61 tgcggtcgag cggcccggtg aaccctccag ccttgatgtc gctgtcggcg gtggacatcg
      121 tcaggcctcg acttcccgga ccggctcgac gaggagcgga gcggcgtgca gcggctgcgt
      181 ggccttgcgc ttggcggcga tgtcgcgcca gacgtgatgc acctgcgctt cggtgagctt
      241 ggccgccgcc gccacggcct cggccgcgac cccgtggttg aggccataaa ggcagaggtc
      301 catgagcccg tagggcaagg cgaagtagaa ctcttcctgg ctttgcggca gcgaataggt
      361 gtcggtggtc ggcggccgcc gccggatttc ctcggggacc ccgagatact cggcgagcgc
      421 gtagacctgc gacttgtaga ggtgcgcgat cggcttgacg tcggcggcgc cgtcgccgtt
      481 cttgacgaag aagccctggt cgtattcgag ccggttgggg gtgccgagga cggcgaagtt
      541 cagccggtcg gcgtggtagt attcgaactg cttgcgggtg cgctgcttca tgttggtggc
      601 ggcgacgacg cccagatagg cggcgagggg cagccgatgc gtcgtctgcg tgccgtcggg
      661 cgcgcggacc acgagagagg agatgttgta gccgtcgccg ccggcgctct ggccgatcac
      721 caccttgcag gcccagccgg cgccgtagtc gggcacgacg ctgcgcacgg ccgcgtcgcg
      781 ccgggcgtaa cagccgagcg catcgagggt gggcccgatg tcctcgacca tgggttcgat
      841 gccgaacgtt gcggcgacga gttcacccag cctccggctt tccggatcgg agtcgcgttc
      901 cggcatcagc agggcctgga cgttccgggc cccgacagcg cggacggcga gcgccaccga
      961 taccgaggaa tcgatgccac cggagaggcc gagcaccagc ccgcgccgcc ggatggagcg
     1021 cagctgcgtg cgaagcgcgg cgacgatcct gtcggtctcg cgtgccgcat cgacctgcag
     1081 cgcatcggcg gaaaattcgg gcaggacgtg cagcatcaga cgacgggctc cagggattgg
     1141 cggaccaggc ggcggctcac cttgccgctc tcggtcttgg ggaggctggt gcggaattcg
     1201 acggatttgg ggaccatgaa gtcctcgagc gtgcgggcgc aggcgcggag cacctgctgt
     1261 tcggtgagcg ccggatcgga gcgcacgaca atcgccttga tcgcctggcc gagcacggca
     1321 tcggggacgc ccaggaccac cgcttcggcg acaccgggga tggcatgcag cgcggtttcg
     1381 acttcgcgcg gggcaacttt ctcgccgcgg gtcttgatga tgtcgtcgcg gcgcgagacg
     1441 aaatacagga agccatcctc gtcggcatag aacaggtcgc cggtgaacag cacgggctgg
     1501 ccggtgtcgc gatccgggcg gacggcgcgg gcgctggcga gcggattctg ccaatacccc
     1561 tgcatgacgt tggggccgcg gatcacgagc tcaccggtgg caccgggcgg cgcgtggtgg
     1621 ccctggctgt cgaccaccca ggcccggctg cccgggatgg cgatgccgac cgagccgggc
     1681 cggctgtcga tctcggcggg cggcaggtag gtggcgcgcg tgcattcggt ctggccgtac
     1741 atcgaataga aatcgacggc ggggagcagt tcgcggagcc gggcgacgtg cgcggccggc
     1801 aggggcgctg ccgcattggt catgtagcgc aggtgggcaa aggcggcggg cggcagctcg
     1861 ctctgctgca acagcaaagc cgcaatggtc ggcaccagcg ggaacgccgt cacgcgctcg
     1921 cgcgccatca cctcgaactc ggcggccggg aacgcgaagc tcttttcgag caccagcgtg
     1981 gcgccgacct tgatcgc
//
LOCUS       DATAZA010000484         5238 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2741021, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000484 DATAZA010000000
VERSION     DATAZA010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5238
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2741021"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..339
                     /locus_tag="VHZ56_12075"
     CDS             <1..339
                     /locus_tag="VHZ56_12075"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar nucleotide-binding protein"
                     /protein_id="HEX4298749.1"
                     /translation="APTPAGLIAEVTARFVAQPVPGLYHLAPAGETSWFGYAQLLVEE
                     AIAAGAALRLSPAGIRPIAARDYPTRAKRPLNSRLDTRKLRQTLGISLPAWQEGVRQL
                     IKTLRAEGEL"
     gene            336..1217
                     /gene="rfbA"
                     /locus_tag="VHZ56_12080"
     CDS             336..1217
                     /gene="rfbA"
                     /locus_tag="VHZ56_12080"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007794873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEX4298750.1"
                     /translation="MSRKGIILAGGSGTRLMPATAPISKQLLPIYDKPMIYYPLATLM
                     GGGIRDILIVSTPHDLPLFERLFAGAGAWGIRLSFAAQPRPEGIAQALVIGEDFLGGD
                     PGALILGDNLFFGHDLPAKLARADARQQGATVFAHHVTDPERYGVASFDADGKVLSLE
                     EKPQAPKSNYAVTGLYFYDGEAPRMARSLKPSPRGELEITDLNRLYLERGALTVEVLG
                     RGYAWLDTGTHDSLLDAGQFVATMEKRQGLKIACPEEIAWRNGWIDDRALLALAAPLS
                     ASGYGRYLTSIVAEGRR"
     gene            1214..1762
                     /gene="rfbC"
                     /locus_tag="VHZ56_12085"
     CDS             1214..1762
                     /gene="rfbC"
                     /locus_tag="VHZ56_12085"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018896487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HEX4298751.1"
                     /translation="MKFTPLALPEVLLIEPRVFADDRGAFFESFNAVAFAAAAGRETA
                     FIQDNHSVSRRGVVRGLHYQLPPHAQGKIVRTVAGEIFDVAVDIRRSSPSFGHWVGEV
                     LSAQNRRQLWVPPGFAHGFMALSEATEVVYKTTTLYVPASERSIRWDDATIGIDWPAG
                     VAPVLSAKDAAAPPFADAEMFA"
     gene            1895..3475
                     /locus_tag="VHZ56_12090"
     CDS             1895..3475
                     /locus_tag="VHZ56_12090"
                     /inference="COORDINATES: protein motif:HMM:NF012340.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C1 family peptidase"
                     /protein_id="HEX4298752.1"
                     /translation="MGAVIAAVLTLAAGIGAAAAQDHPYATGGAPTPAAEKQGISQAP
                     AFRDFLPEAVDLSHYMPPVGDQGKQGSCVGWATAYAARAYYAEQVEHRDISLPQNVPS
                     PAWLFDIIHLGGDCEQGAYIPDAMKVLMTGAYSLKDFPYDDTKCPRPLPPARVQATDF
                     RIDSFEQVYDQQADPDNLDKIKGAISTGNPVVILASLDNGFFDLSPQHKVWHSDASQK
                     DVGGHAITLVGYDDRTQTFKFINQWSTKWGDQGYGYMTYDTFEARVYEGFIMHLPGDP
                     EITLTSADLNPAEVVDAPLPPPPKIILSVTPVSESRDLGLTPEAPIDVGTLSCGKVDI
                     AKDAQGNTIATGFVGTQAELDQVQAKLQGKVDDDQVTLAPWPACEVRLTLADQLADSD
                     PPQAVVDPTAPKVGDTFRVGIESPGFASYLYAAYVGADGQVTTLAQPSSADLQAKPAH
                     TQLKFGDADASGVGLTVSKPVGDEMLVVLASEKPLFAAALPDSQTDRQFLSGLRDAVL
                     SGKAGRVTATLVPVTTAE"
     gene            3623..>5238
                     /locus_tag="VHZ56_12095"
     CDS             3623..>5238
                     /locus_tag="VHZ56_12095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012556587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEX4298753.1"
                     /translation="MPHDTPLISTIVAGLVLAFIFGAIANRFRMPPLVGYLVAGVAVG
                     PFTPGFVANAELAGELSEIGVILLMFGVGLHFSLKDLLSVQAVAVPGALLRIAGGTAM
                     GIGLGFLMGWPLGGGLILGLALSVASTVVLLKALQDRHLVESDRGRIAIGWVIVEDIA
                     MVLALVLIPAFAGVLGGNAAPVHDPFVDLIERLTGMQLSIWGVLAITVVKLAAFVGFM
                     LVVGRRVIPWILHLTAHTGSRELFRLAVLAIALGVAAGAAYLFGVSLALGAFFAGMIL
                     SESELSNRAAQESLPFRDAFAVLFFVSVGMLFNPSILWTHPWQVLGTLFIILVGKSVL
                     GFVLVTALRRPAGAALTISASLAQIGEFSFILAALGVGLGLMPAEGQSYILAGAIISI
                     IVNPLLMYLAEHVQPRLEARVAASGIVVPQRVEPDLTHSAMPAAEPIDERNPTTLSGH
                     AVLIGYGRVGTVVAEGLKAQGTPFVLIEDADKRVAAAHAEGIEVVVGNAASGKALALA
                     NIGAATALLVAIPNAFEAGQAVEQAHRLNPG"
BASE COUNT          794 a         1714 c         1855 g          875 t
ORIGIN      
        1 gcgccgacgc cggccgggct catcgccgag gttacggcac ggttcgtggc gcaaccggtc
       61 ccgggtctct atcacctggc tccggccggg gagacgagct ggttcggcta cgcgcaattg
      121 ctggtcgagg aggcgatcgc cgccggggcg gcactgcggc tgtcgcctgc tggtattcgc
      181 ccgatcgccg cgcgcgacta tccaaccagg gccaagcggc cattgaactc gcgacttgat
      241 acgcgaaagc tccggcaaac actgggcatt tcactgccgg cttggcagga gggcgtgcgg
      301 cagttgataa agacgctcag ggcggaggga gagctgtgag ccggaagggc atcatcctgg
      361 cgggtggatc ggggacgcgg ctgatgccgg cgacggcgcc gatcagcaag caattgctgc
      421 cgatctacga caagccgatg atttactatc cgctggccac cctgatgggc ggcggcatcc
      481 gcgacatcct catcgtctcg acgccgcacg acctgccgct gttcgagcgg ctgttcgccg
      541 gcgccggcgc gtgggggatc aggctgagct ttgcggcgca gccccggccg gaagggatcg
      601 cgcaggcgct cgtgatcggc gaggatttcc ttgggggcga tcccggcgcg ctgatcctcg
      661 gcgacaatct gttcttcggc cacgacctgc cggcgaagct ggcgcgtgcc gatgccaggc
      721 aacagggcgc gacggtgttt gcgcatcacg tgacggatcc cgagcgctat ggcgtggcga
      781 gcttcgatgc cgacggcaag gtcctctcgc tcgaggagaa gccgcaggcg ccgaagtcca
      841 actatgcagt caccgggctc tatttctatg acggggaggc gccgcggatg gcgcggtcgc
      901 tcaagccgtc gccgcgcgga gagctcgaga tcaccgacct caaccggctg tatctcgagc
      961 gcggcgcgct gacggtcgag gtgctgggcc ggggctatgc gtggctcgac accggcacgc
     1021 acgattcgct gctcgacgcc ggccagttcg tcgccaccat ggagaaacgc caaggactga
     1081 agatcgcctg cccggaggag atcgcctggc gcaatggctg gatcgacgac cgggcgctgc
     1141 tggcgctggc ggccccgctc agcgcctcgg gctacggccg gtatttgacg agcatcgtgg
     1201 cggagggccg gcggtgaagt tcaccccgct ggccctgccg gaggtcctgc tgatcgagcc
     1261 gcgggtgttc gccgacgatc ggggagcgtt cttcgagagt ttcaacgccg tcgcctttgc
     1321 ggcggccgcg gggcgcgaaa cagcgttcat ccaggacaat cattcggtgt cgcgccgcgg
     1381 ggtggtgcgg ggactgcact accagttgcc accccatgcg cagggcaaga tcgtacgcac
     1441 cgtcgccggc gagatcttcg atgtggccgt cgatatccgt cgatcctcgc cgagcttcgg
     1501 gcactgggtc ggcgaagtgc tcagcgcgca gaaccggcgg cagctctggg tgccgcccgg
     1561 ctttgcgcac ggtttcatgg cgctgagcga ggcgaccgaa gtcgtctaca agaccacgac
     1621 gctttatgtt ccggcgagcg agcgatcgat ccgctgggac gatgcaacga tcggcatcga
     1681 ctggccggcc ggtgtcgcgc cggtgctttc ggccaaggac gccgcagcgc cgccgttcgc
     1741 ggacgccgag atgttcgcct gaaacgccgc cgcaaagcgc gcaagcggtt gccatcgctc
     1801 agcctttctt gcgcccgcat ggtcatgcta gcgtccgcga aacggctgcg gccggggcgc
     1861 atttttcgag gggaatccga tgacaggacg tggcttgggc gccgttatcg cggcagtgct
     1921 gacgctggcg gcgggcatcg gggctgccgc tgcgcaggac cacccttacg cgaccggcgg
     1981 cgcgccgacc ccggcggcgg aaaagcaggg gatttcgcag gctccggcgt tccgcgattt
     2041 cctgccggaa gcggtcgatc tctcgcacta catgccgccc gtcggcgacc agggcaaaca
     2101 gggctcgtgc gtggggtggg cgacggcgta cgcggcgcgt gcctactatg ccgagcaggt
     2161 ggagcatcgc gatatcagcc tgccgcagaa cgtgccgagc ccggcgtggc tgttcgacat
     2221 catccatctg ggcggcgact gcgagcaggg cgcctacatc cccgacgcga tgaaggtgct
     2281 gatgacgggc gcctactcgc tcaaggactt tccctatgac gacaccaagt gcccgcggcc
     2341 gctgccgccg gcgcgggtgc aggcgacgga tttccgcatc gacagcttcg agcaggtcta
     2401 cgaccagcag gcggatccgg acaacctcga caagatcaag ggcgcgatct cgacgggcaa
     2461 ccccgtcgtc atcctcgcgt cgctcgacaa cggcttcttc gacctcagtc cgcagcacaa
     2521 ggtctggcat tccgacgcca gccagaagga cgtgggtggc catgcgatca cgctggtcgg
     2581 ctacgacgac cgcacgcaga cattcaagtt catcaaccag tggtcgacca aatggggcga
     2641 ccagggttac ggctacatga cctacgacac cttcgaggcg cgggtgtacg agggcttcat
     2701 catgcacctg ccgggagatc cggagatcac gctgacctcg gcggacctca atcccgccga
     2761 agtcgtcgat gcgccgctgc cgccgccccc gaaaatcatc ctgagcgtca cgccggtgtc
     2821 ggaaagccgt gacctcgggc tgacgccgga ggctccgatc gatgtcggga cgctctcctg
     2881 cggcaaggtc gatatcgcga aggatgcgca gggcaatacg attgccaccg gcttcgtcgg
     2941 tacgcaggcc gagctggacc aggtgcaggc aaaactccag ggcaaggtcg acgacgacca
     3001 ggtgacgctg gcaccatggc ctgcctgcga agttcggctc acgcttgccg atcagctcgc
     3061 cgacagcgac ccgccgcagg cggtggtcga tccgacggcg ccaaaagtcg gcgatacgtt
     3121 ccgggtcggt atcgagtcgc cgggattcgc gagctatctc tacgccgcgt atgtcggcgc
     3181 cgacggccag gtgacgacgc tcgcccagcc gagttcggcc gatctccagg ccaagcccgc
     3241 ccacacccag ctcaagttcg gcgatgccga tgcgagcggg gtggggctga cggtgagcaa
     3301 gccggtgggc gacgagatgc tggtggtgct ggcgagcgag aagccgctgt tcgcggcggc
     3361 gctgcccgac agccagaccg accggcagtt cctcagcggc ctgcgcgacg cggtgctgtc
     3421 cggcaaggcc ggcagggtca cagcgacact ggtgccggtg acgacggcgg agtgagccct
     3481 cgtgcgggtt gacggggacg ggcgctgctc ggcgctcccc gtcattttgc cgcgactttg
     3541 cccaggcgcc cggcttgcgg cggccggcaa ggttccccat gttggccgga ccaccgcgcc
     3601 gacgccgaac ggagcctgag cgatgccgca cgatacgccg ctgatctcga cgatcgtcgc
     3661 gggcctggtg ctggccttca tcttcggcgc gatcgccaac cgcttccgca tgccgccgct
     3721 ggtcggctat ctggtcgccg gcgtcgcggt cgggccgttc acgcccgggt tcgtcgccaa
     3781 cgcggagctc gccggcgaac tcagcgagat cggcgtgatc ctgctgatgt tcggcgtagg
     3841 cctgcatttc tcgctcaagg acctgctgtc tgtccaggca gtggcggtgc ccggcgcgct
     3901 gctgcgcatt gccggcggca cggcgatggg catcgggctt ggcttcctca tgggctggcc
     3961 gctgggcggc gggctgatct tggggctggc gctgtcggtc gcctcaactg tcgtgctgct
     4021 caaggcgctg caggaccgac acctcgtcga gtccgaccgg ggccggatcg ccatcggctg
     4081 ggtgatcgtc gaggacatcg ccatggtgct ggcgctggtg ctgatcccgg ccttcgcggg
     4141 cgtgctcggt ggcaacgcgg cgccggtgca cgacccgttc gtcgacctca tcgagcggct
     4201 gacggggatg caactgagca tctggggcgt gctggcgatc accgtcgtca agctcgcggc
     4261 cttcgtcggc ttcatgctgg tcgtcggccg gcgggtcatc ccctggatcc tgcatctcac
     4321 ggcgcatacc ggcagccgcg aactgttccg gctggcggtg ctcgccatcg cgctcggggt
     4381 ggccgcggga gccgcctacc tgttcggcgt gagcctcgcc ctcggggcgt tctttgccgg
     4441 catgatcctc agcgaaagcg agctctccaa ccgcgcggcg caggagagcc tgccgttccg
     4501 cgatgcgttc gcggtgctgt tcttcgtttc cgtcggcatg ctgttcaacc cctcgatcct
     4561 gtggacgcat ccgtggcagg tgctggggac gctgttcatc attctcgtcg gcaagtcggt
     4621 gctcggcttc gtgctggtga cggcgctgcg ccggcccgcc ggggcagcgc tgacgatttc
     4681 ggcgagcctc gcgcagatcg gcgagttctc cttcatcctg gcggcgctcg gagtcgggct
     4741 cggactgatg ccggccgagg gccagagcta tatccttgcc ggcgcgatca tctcgatcat
     4801 cgtcaatccg ctgctgatgt acctcgccga gcatgtgcag ccacggctcg aggcgcgcgt
     4861 cgcggcgagc ggcatcgtgg tgccgcagcg ggtcgagccg gatctcacgc attcggcgat
     4921 gccggctgcc gagcccatcg acgagcgcaa tccgacgacg ctcagcggcc acgccgtgct
     4981 gatcggctat gggcgggtgg gcaccgtggt cgccgaaggc ctcaaggcgc agggaacgcc
     5041 gttcgtcctg atcgaggatg ccgacaagcg cgtggcggcg gcgcatgccg aagggatcga
     5101 ggtcgtggtg ggcaacgcgg ccagcggcaa ggcgctggcg ctcgccaata tcggcgcggc
     5161 gacggcgctg ctggtggcca tcccgaatgc gttcgaagcc gggcaggcgg tggagcaggc
     5221 gcaccggctg aatccggg
//
LOCUS       DATAZA010000485         7192 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1464122, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000485 DATAZA010000000
VERSION     DATAZA010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 7192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7192
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1464122"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1959
                     /locus_tag="VHZ56_12100"
     CDS             <1..1959
                     /locus_tag="VHZ56_12100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018114470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GH116 family glycosyl hydrolase"
                     /protein_id="HEX4298754.1"
                     /translation="LTAADAEQAEADRGDLTMATDAEIVQHQDHHFRGQWFDDLTVFW
                     KDFGRAGPLPERHYEGPRSQHMQRFPEHGTLAAKVTVPPGETKIVRFVISWSYPHGDA
                     YWAYRRAPDSPVPDRPTPLWKNYYATQWANSAASAGEALARWDELAGATLKFRDSLFG
                     SSLPAPIKDAASSTLALLRTATCIRLEGGELWAWEGQHRFDGSCEGSCTHVWNYQQAL
                     SQLFPAIERTLRETEWTYNQLPSGGLTFRQKLPLGSGFDVIGPCADGHFGAVIKTCRE
                     WTLSGDTAWLGRYWPQVRRAMEYAWSTDNPDRWDPDQTGILSGRQHQTLDMELFGPNS
                     WLATMYVAALLATSRMAGAMGDGALAEKCARMAKAGARYIDDSLYNGRYFIQAIDLGD
                     KDVLAPFDTGRNAGMLADDFMSAYWSEEHREIKYQFGEACIADQILGQWHAEVAGLGS
                     FLSADKVRSGLAAVHAENFRATMDDHFNPCRNFAFEDEGGLLIATYPKGTRQPMVAAP
                     YAEESWSGIEYASASHMIMRGLVEEGLEIVAAVRRRHDGARRNPYNEIECGSYYARSM
                     SAWQLVNAWSGLRADLVARTMAFAPRTDGNYQLPWSAGAGWGELARDDGGLTLSVHGG
                     QLPAMQVSVAGRSYGTRPMAAGEAQELR"
     gene            complement(1962..3839)
                     /locus_tag="VHZ56_12105"
     CDS             complement(1962..3839)
                     /locus_tag="VHZ56_12105"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX4298755.1"
                     /translation="MTVARRRWTLPSFGQASFVLVCLGVPLAVYLIFVILPIVQAFYY
                     SLTNWGGFSKKLDLVGFDNYARLLTDGVFLKALTNNLVLALVLPPVTIVLSVTLATLV
                     TVGGVSRGEIQGIRNSDLYRIISFFPYVVPAIVIGIIWAQVYDPSSGLLNGILTSIGF
                     SGLKSYPWIGDERTAMGASIFVIVWSMAGFYMVLFIAAIKGIPSEVYEAARVDGAGRF
                     RTAIFVTVPMIRDTIRTAYIYLGILALDAFVYMQALNSNGGPNNATLTISQDLRVTAF
                     SKGKFGYSTSMGVVLAVVTLLFAALVFLVFYLLGERATKRQPVPAAATKPGANAFAEQ
                     QAILARPLPKRPARKPWGDKTVGAISHTALIGWVVIVCAPLLWVLVSSFKTTKEVLGS
                     PFTWPANWNFDNYVSAWTSAGIGTYFVNTVIVVTSALVIVMILGAMCAYVLARYEFRG
                     NKLIYYAMLAGLAFPIFLAIVPLFFVLQWFHIGNTLFGLIITYVAFALPFTVFFLYAF
                     FRTLPQEVAEAAALDGCGPWRIFFQIMLPMARPGLASVAIFNFLGLWNQFLLPVALNT
                     KDSNYVLSQGMAKFASQAGYAVDFGALFAAVVITVLPVLAAYIIFQRQLQGSVSPGLL
                     K"
     gene            complement(3869..5257)
                     /gene="ngcE"
                     /locus_tag="VHZ56_12110"
     CDS             complement(3869..5257)
                     /gene="ngcE"
                     /locus_tag="VHZ56_12110"
                     /inference="COORDINATES: protein motif:HMM:TIGR03851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0048029 - monosaccharide binding [Evidence
                     IEA];
                     GO_function: GO:0048030 - disaccharide binding [Evidence
                     IEA];
                     GO_process: GO:0006032 - chitin catabolic process
                     [Evidence IEA];
                     GO_process: GO:0015764 - N-acetylglucosamine transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine/diacetylchitobiose ABC
                     transporter substrate-binding protein"
                     /protein_id="HEX4298756.1"
                     /translation="MGINKTIDRRTFMRGSAAAAAALPLGGLLGSTGLVSRAFAQDAS
                     NPFSVADGSSVDAVIFNGGYGIDYVQFAADIMQKQHPKVTVKVSPSTQIATELQPRFV
                     GGNPPDLIDNSGADAIGFSSIIDQLTDMNTVLDAPNLEGTKIRDTLFGGVEAPGTFGD
                     KFVALNYVLTVYGIWYSGSLFAQNNWTPPTNWDEAKELGAKAKEKNLFLLGWGKEAAT
                     YYQTTMIASAIKEGGDEVRVALDNIQPKCWSHPAVQAAFTHLFDCIAAGYMKPGGSGT
                     QFTAAQAQWSNDESFLLYPSGSWIENEMKKATKDGFKMMGIPDLAVTAGAKMKPTALH
                     STAGEPFVLPSAGANSAGGKELLRTMLSKDAATNFVKTRLAPTIVKGTVPDDGFGSTA
                     LLSQVKMLGDAGNDIFSWNFVDLYGTNKDMLVPWNSFLDGKLDVAGLTTALQGITDAV
                     YNDSSVTKVVVK"
     gene            complement(5341..6090)
                     /locus_tag="VHZ56_12115"
     CDS             complement(5341..6090)
                     /locus_tag="VHZ56_12115"
                     /inference="COORDINATES: protein motif:HMM:NF002805.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEX4298757.1"
                     /translation="MTDLTTRYLSEVTTRLQRLAVASQPIDDAIAMIAAALEAGGVVQ
                     AFGTGHSEAFAMEIAGRAGGLIATNRIALRALVLRGDRDVSALGGAEFERDPDIGENL
                     LALFDVQPHDIFMIASNSGVNGSILGMALAAKARGHKLIAVTSLDHTMRVTPKHPSGK
                     RLSEVADIVIDNLAPYGDSTLELEGGIGVGAVSSITAAFIAQRITIGVAETMRRRGKT
                     PPVYISANIPGGDEHNRALEDLYGDRIRREA"
     gene            complement(6087..7016)
                     /locus_tag="VHZ56_12120"
     CDS             complement(6087..7016)
                     /locus_tag="VHZ56_12120"
                     /inference="COORDINATES: protein motif:HMM:NF013539.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEX4298758.1"
                     /translation="MLDRIKTYQSQMPATMAKIAAVLMDDPRAPLSLSITDLAIRAGT
                     SAASVTRFCRMIGYAGYAPLRVGIAEDVGRGGAQAAWFADIGRSFGPHDPPDDIRRAL
                     LNTHVLSLQTTAGLLDLPTAIRVAAAIAGSRHVDVYGVGGSALTALEVEARLYRIGIN
                     VHTWAEVHNGLTSAAILDGQCVAIGISNTGRTDETIQMLTVAKAAGAHTVAITGNPES
                     PLARVAEDVLIAASPDGYLQPADLSARHCQLFVVDLLYLLIAQSNFDRTTRLLAASGA
                     AVAPRRRPARGTASSRPAARRATAQLSTEPSEL"
BASE COUNT         1228 a         2203 c         2581 g         1180 t
ORIGIN      
        1 ctgacggcgg ccgatgcgga gcaggcggag gcggatcgcg gcgacctgac gatggcgacg
       61 gatgccgaga ttgtgcagca ccaggaccat catttccgcg gccagtggtt cgacgacctc
      121 acggtgttct ggaaggattt cggcagggcc gggccgctgc cggagcggca ctacgagggc
      181 ccgcgctcgc agcacatgca gcgcttcccc gagcacggca cgctcgccgc caaggtgacg
      241 gtgccccccg gcgagaccaa gatcgtgcgc ttcgtgatct cgtggagcta tccgcacggt
      301 gacgcctact gggcctatcg gcgggcgccc gacagtccgg tgccggaccg gccgacgccg
      361 ctgtggaaga actattacgc gacgcagtgg gccaattcgg ccgccagcgc cggcgaggcc
      421 ctggcgcgct gggacgagct ggcgggagcg acgctgaaat tccgcgacag cctgttcggc
      481 tcgagcctgc cggcgccgat caaggatgcg gcctcgtcga cgctggcgct gctgcgcacg
      541 gccacctgca tccgcctcga gggcggcgag ctctgggcct gggagggcca gcaccggttc
      601 gatggttcgt gcgagggctc gtgcacgcat gtgtggaact accagcaggc gctgtcgcag
      661 ctgtttccgg cgatcgagcg gacgctgcgc gagaccgagt ggacctacaa ccagctgccc
      721 tcgggcggcc tgacgtttcg ccagaagctg ccgctcgggt cgggcttcga cgtcatcggg
      781 ccctgcgccg atggccattt cggcgccgtc atcaagacct gccgcgagtg gacgctgtcg
      841 ggcgacaccg cctggctcgg ccgctactgg ccgcaggtca ggcgggcgat ggagtacgcc
      901 tggtcgacgg acaacccaga tcgctgggat cccgaccaga ctggcattct atccgggcgg
      961 cagcaccaga cgctcgacat ggagctgttc gggcccaatt cgtggctggc gacgatgtat
     1021 gtcgcggcgc tgctggcgac gagccgcatg gccggggcga tgggcgacgg cgcgttggcg
     1081 gaaaaatgcg cccgcatggc caaggcggga gcccgctaca tcgacgacag tctctacaac
     1141 gggcgctatt tcatccaggc gatcgatctc ggcgacaagg acgtgctggc gccgttcgac
     1201 accggccgca atgccggcat gctcgccgac gatttcatgt cggcgtactg gtcggaggag
     1261 catcgggaga tcaagtacca gttcggcgag gcgtgcattg ccgaccagat cctcgggcag
     1321 tggcacgccg aggtcgcggg acttggcagc ttcctgtcgg ccgacaaggt acggagcggg
     1381 ctggcggcgg tgcatgccga gaatttccgg gcgacgatgg acgaccattt caatccctgt
     1441 cgcaactttg ccttcgagga cgagggcgga ttgctgatcg ccacttatcc caagggaacc
     1501 cgccagccga tggtggcggc gccctatgcc gaggagtcct ggtccggcat cgaatacgcc
     1561 tcggcctcgc acatgatcat gcgcggactg gtggaggagg gcctcgagat cgtggctgcg
     1621 gtgcgcaggc ggcacgacgg ggcgcggcgc aacccctaca acgagatcga gtgcggctcc
     1681 tattacgcgc gctcgatgtc ggcgtggcag ctggtcaacg cctggagcgg cctccgcgcc
     1741 gacctggtcg cccggacgat ggcgttcgcg ccccggaccg atggcaatta ccagctcccg
     1801 tggtcggccg gtgcgggctg gggcgaactg gcgcgcgacg acggcgggct caccctcagc
     1861 gtgcatggcg gccagttgcc ggcaatgcag gtcagcgttg ccggacgtag ctacggcacg
     1921 aggccgatgg cggccggcga ggcgcaggag ctccgctgag cctatttcag caggcccggc
     1981 gagaccgatc cctgcagctg gcgctggaag atgatgtagg cggcgagcac cggcagcacg
     2041 gtgatcacga cggcggcgaa cagcgcgccg aagtcgacgg cgtagccggc ctgcgaggcg
     2101 aacttggcca tgccctgcga cagcacgtag ttgctgtcct tggtgttgag cgcgaccggc
     2161 agcaggaact ggttccacag gccgaggaag ttgaagatgg cgaccgaggc gaggcccgga
     2221 cgcgccatcg gcagcatgat ctgaaagaag atgcgccacg gaccgcagcc atcgagcgcc
     2281 gccgcctccg cgacttcctg cggcagcgtg cggaagaagg cgtagaggaa gaacaccgtg
     2341 aagggcagcg cgaacgccac gtaggtgatg atcagcccga acagcgtgtt gccgatgtgg
     2401 aaccattgca gcacgaagaa cagcggcacg atggcgagga agatcggaaa ggccagcccc
     2461 gcgagcatgg cgtagtagat cagcttgttg ccgcggaatt cgtaacgggc gaggacatag
     2521 gcgcacatgg cgccgaggat catgacgatg accagcgcgc tggtcacgac gatgaccgtg
     2581 ttgacgaagt aggtgccgat gccggcgctg gtccaggccg agacgtagtt gtcgaaattc
     2641 cagttggccg gccaggtgaa gggcgagccg agcacttcct tggtggtctt gaacgacgag
     2701 accagcaccc agagcagcgg cgcgcagacg atgaccaccc agccgatgag cgcggtgtgc
     2761 gaaatcgccc cgaccgtctt gtcgccccag ggcttgcggg ccgggcgctt cggcagcggc
     2821 ctcgccagta tcgcctgctg ctcggcgaag gcattggcgc cgggctttgt cgcagcggcg
     2881 ggtacgggct ggcgctttgt cgcgcgctcg ccaagcaggt agaataccag gaacaccagg
     2941 gcggcaaaca gcagcgtgac gacggcgagc acgacgccca tcgaggtcga atagccgaac
     3001 ttgcctttcg agaaggcggt gaccctgagg tcctgcgaga tggtgagcgt ggcgttgttc
     3061 gggccgccat tggaattgag ggcctgcatg tagacgaagg cgtcgagcgc gagaatgccg
     3121 agatagatgt aggcggtccg gatggtgtcg cggatcatcg gcacggtgac gaagatcgcc
     3181 gtgcggaagc ggccggcgcc gtcgacgcgc gcggcttcgt agacttccga cgggatgcct
     3241 ttgatcgccg cgatgaagag caccatgtag aagccggcca tcgaccagac gatgacgaag
     3301 atcgaggcgc ccatggcggt gcgctcgtcg ccgatccagg gataggattt gaggccgctg
     3361 aagccgatcg aggtcaggat gccgttcagc aggccgctcg agggatcgta gacctgcgcc
     3421 cagatgatgc cgatgacgat cgccggcacg acgtagggga agaacgagat gatgcggtag
     3481 aggtcggagt tcctgatgcc ttggatttcg ccgcggctga cgccgccgac cgtgaccagt
     3541 gttgccaggg ttaccgacag cacgatggtc acgggcggca gcacgagcgc cagcacgagg
     3601 ttgttggtca gcgccttgag gaagacgccg tccgtcagca gccgcgcgta gttgtcgaag
     3661 ccgacgaggt cgagtttctt ggagaacccg ccccagttgg tgagcgagta gtagaaggct
     3721 tgcacgatcg gcaggatcac gaagatgagg tagaccgcca gcggaactcc gagacagacc
     3781 agcacgaagc tggcctgtcc gaaactcggc agtgtccacc gccgtcttgc gacggtcacc
     3841 ggttgcgacc ctgcgatcgt gccgtccgtc acttcacgac gaccttggtc accgagctgt
     3901 cgttgtagac ggcatcggtg atgccctgca gcgcggtggt caggccggcg acgtcgagct
     3961 tgccgtcgag gaagctgttc cagggaacca gcatgtcctt gttggtgccg tagaggtcga
     4021 cgaagttcca cgagaagatg tcgttgccgg catcgccgag catcttgacc tgcgagagca
     4081 gcgcggtcga accaaacccg tcgtcgggca ccgtgccctt gacgatggtc ggggcgaggc
     4141 gcgtcttgac gaagttggtc gcggcatcct tgctgagcat ggtgcgcagc agttccttgc
     4201 caccggcgct gttggccccg gccgagggca gcacgaaggg ctcgccggcg gtcgagtgca
     4261 gggcggtcgg cttcatcttg gcaccggccg tgaccgcgag gtccgggatg cccatcatct
     4321 tgaagccgtc cttggtcgcc ttcttcatct cgttctcgat ccacgagccc gagggataga
     4381 gcaggaagga ctcatcgttc gaccactgcg cctgggcagc ggtgaactgg gtgcccgacc
     4441 cgcccggctt catgtagccg gcggcgatgc agtcgaacag gtgggtgaac gccgcctgca
     4501 cggccggatg cgaccagcac ttgggctgga tgttgtcgag ggcgacgcga acttcgtcgc
     4561 cgccttcctt gatcgccgag gcaatcatgg tggtctggta gtaggtggcg gcttccttgc
     4621 cccagccgag caggaagagg ttcttttcct tggccttggc gccaagttcc ttggcctcgt
     4681 cccagttggt cggcggcgtc cagttgttct gggcgaagag gctgcccgaa taccagatgc
     4741 cgtagacggt cagcacgtag ttgagggcca cgaacttgtc gccgaaggtg ccgggagcct
     4801 cgacgccgcc gaacagcgtg tcgcggatct tggtgccttc gaggttcggg gcatccagaa
     4861 cggtgttcat gtccgtcagc tggtcgatga tcgacgagaa gccgatggcg tcggcgcccg
     4921 aattgtcgat caggtccggc ggattgccgc cgacgaagcg cggctgcagt tccgtcgcga
     4981 tctgggtcga gggcgaaacc ttcaccgtca ccttcggatg ctgcttctgc atgatgtcgg
     5041 cagcgaactg cacgtagtcg atgccgtagc cgccgttgaa gatcacggcg tcgacggacg
     5101 agccgtcggc gacgctgaac ggattgctgg catcctgcgc gaacgcgcgg ctcaccagtc
     5161 cggtcgagcc gagcagccct cccagcggca gtgccgcggc cgcggccgcc gatccgcgca
     5221 tgaacgtccg gcgatcaatg gtcttgttga tacccatttg tggtccttcc ctttgtttag
     5281 ctcgatattt tgtttagctc gacattacgc ctcacgccgg ccggttgtgc aacaaggccg
     5341 tcaggcctcc ctgcggatcc ggtcgccata gaggtcttcc aaagcacggt tgtgctcgtc
     5401 cccccccggg atgttggccg aaatataaac cgggggtgtc ttgccgcgcc ggcgcatcgt
     5461 ctcggcgacg ccgatggtga tgcgctgggc gataaaggct gcggtgatcg aggacacggc
     5521 gccgacgccg atgccgccct cgagctcgag cgtgctgtcg ccatagggcg ccaggttgtc
     5581 gatgacgatg tcggcgacct cgctcaggcg cttgccgctc ggatgcttgg gcgtgacgcg
     5641 catggtgtgg tcgaggctgg tgacggcgat cagcttgtgg ccgcgcgcct tggcggccag
     5701 cgccatgccc aggatcgagc cgttcacgcc ggaattggag gcgatcatga agatgtcgtg
     5761 cggctgcacg tcgaacagcg cgaggaggtt ctcgccgata tccggatcgc gctcgaattc
     5821 ggcgccgccc agcgccgaaa catcgcggtc gccgcgcagc accagggccc gcagcgcgat
     5881 gcggttggtg gcgatgaggc caccggcgcg cccggcgatc tccatcgcga aagcctccga
     5941 gtggccggta ccgaacgcct gcacgacgcc gccggcctcg agcgcagcgg cgatcatcgc
     6001 gatcgcgtcg tcgatcggct ggctggcgac ggcgaggcgc tggaggcgcg tggtgacttc
     6061 gctcaggtat cgggtggtca ggtcggtcat agttcgctcg gttcggtgga cagttgggcc
     6121 gtcgcacggc gcgccgcggg acgcgacgag gcggtgccgc gcgccggccg gcggcgcggc
     6181 gcaacggcgg cgcccgaggc cgccagcagc cgcgtggtac ggtcgaaatt cgactgcgcg
     6241 atcagcaggt acagcaggtc gacgacaaac agctggcagt ggcgggccga caggtccgcc
     6301 ggctgcagat agccatcggg cgaggcggcg atcagcacgt cctcggcaac ccgggcgagc
     6361 ggcgattccg gattgccggt gatggcgacg gtgtgggcgc cggcggcctt ggccacggtg
     6421 agcatctgga tggtctcgtc ggtgcggccg gtgttggaaa tgccgatggc gacgcactgc
     6481 ccgtcgagga tggcggcgct ggtcaggccg ttgtggacct cggcccaggt gtggacgttg
     6541 atgccgatgc ggtagaggcg ggcttcgacc tcgagcgccg tcagggcgct gccgccgacg
     6601 ccgtagacgt cgacgtgccg cgagccggcg atggcggcgg ccacccggat ggccgtcggc
     6661 agatccagca gccccgcggt ggtctgcagc gacaggacgt gggtgttgag cagggcgcgg
     6721 cggatgtcgt cgggcggatc gtgcggtccg aacgagcggc cgatgtcggc gaaccacgcg
     6781 gcctgggcgc cgccgcggcc gacgtcctcg gcaatgccga cgcgcagcgg cgcgtagccg
     6841 gcgtagccga tcatccggca gaagcgcgtc acgctggcgg ccgaggtgcc ggcccgtatg
     6901 gcgagatcgg tgatcgagag gctgagcggg gcccggggat cgtccatgag cacggccgca
     6961 attttcgcca tcgtggccgg catctgggac tggtaagtct tgatgcggtc cagcacgctg
     7021 aacgtctttg cgccactaag catctatgtt aacgagcccg cgcctgaaaa tcactatcaa
     7081 gaaggccgac atgctgatga aaacaattct tatccagcat gcctggcgat tgcaagcgag
     7141 agggtgaggc cgtgcgcagg accctgctcg ccatcgacgt cggcggctcc ac
//
LOCUS       DATAZA010000486         5211 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_652847, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000486 DATAZA010000000
VERSION     DATAZA010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5211
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_652847"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1006
                     /locus_tag="VHZ56_12125"
     CDS             <1..1006
                     /locus_tag="VHZ56_12125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017990875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF6596 domain-containing protein"
                     /protein_id="HEX4298759.1"
                     /translation="SGRFRGLAPELRRELEAEEDRMPEDRETIEDDTLRLIFTCCHPL
                     LPTDAQVALTLREICGLTTEAIAAAFLARPAAIAQRIVRAKARIRDERLPYAVPPPAE
                     WPDRLDAVLHTIYLIFNEGYDASSGDVLIRHELCAEAIRLARLLRALRPSPDTDGLLA
                     LMLLHQSRAAARTDGDGRLVLLEQQDRRLWNADLIAEGTALAQAAFAAPPVGSHTIQA
                     SIAATHAAAPSAAATDWPRIAGLYDLLLRAEPSPVVELNRAVAIAMRDGPEAGLALMA
                     PLAAGPLAAYRFAHAARADLLRRAGRLDEARSAYARAIELTVQATDRDYLERRLRELG
                     "
     gene            complement(1003..1947)
                     /locus_tag="VHZ56_12130"
     CDS             complement(1003..1947)
                     /locus_tag="VHZ56_12130"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008465 - glycerate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HEX4298760.1"
                     /translation="MATLFDARLNDDDTPYAAAALIEALEGRDVLVSSITDRIDADLI
                     ARLPPSVRLVAQFGNGFDNIDIEAAYAAGLTVTNTPSVLTEDTADMAMMLMLALPRRL
                     VEGAEVLPRDGEWPGWSPTWMLGRRLRGKALGIVGMGRIGSAVAARARTFGLTIHYFS
                     RNRRPPQLEDRLEAVFHHDLDEMLGAVDILSLHTPLTRDTYHILSRERLGRMKPEGYV
                     VNVSRPELIDEAALVDALAAGRLQGAALDVFESGSGISPALLELARAHRIVLTPHMAS
                     ATLEARLEMGDTVIVNIRAFVDGHQPPHRVLPETRARA"
     gene            2107..2637
                     /locus_tag="VHZ56_12135"
     CDS             2107..2637
                     /locus_tag="VHZ56_12135"
                     /inference="COORDINATES: protein motif:HMM:NF018095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEX4298761.1"
                     /translation="MIDRALPALAALLLLSAPALAGTDDNPSGLPLPRFVTTRSDPIN
                     VRVGPGVQYNLAWVYNVAGTPVEIVQEFDVWRKIRDVDGSEGWVHQNMLSSARAGYVS
                     QDAGNQVGLRAGASDDAGVVAWVAPGFPVKISSCDGNWCAVVATDHPADGHPANYSGY
                     LPEGDLWGVVKGETFD"
     gene            complement(2634..3110)
                     /locus_tag="VHZ56_12140"
     CDS             complement(2634..3110)
                     /locus_tag="VHZ56_12140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013217458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HEX4298762.1"
                     /translation="MHDRHMFSRNVPSRRPCLTAVLRMAGLRPTRQRVALAEILFGGA
                     HRHVSAEQLLGEADAAKVNVSLATIYNTLHQFRMAGLLREVAVDASRSYFDTDTSDHH
                     HFYLEDEQRVIDIPASAIVIQNLPAPPPGMSVTHVDVVVRVKKARGPEGAGRLSDD"
     gene            3258..3788
                     /gene="fabA"
                     /locus_tag="VHZ56_12145"
     CDS             3258..3788
                     /gene="fabA"
                     /locus_tag="VHZ56_12145"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     FabA"
                     /protein_id="HEX4298763.1"
                     /translation="MAERQNAYSFEELLACGRGELFGPGNAQLPLPPMLMFDRITHID
                     ETGGSHSRGQVRAELDIRPDLWFFKCHFEGDPVMPGCLGLDALWQMTGFFLGWSGSLG
                     RGRARGGGDIKFSGQVTNDVKLLEYGVDIKRVMRSKVTLGIAEGFVKADGKLIYEAKD
                     LRVGLFVGAQQPATVE"
     gene            3805..5031
                     /gene="fabB"
                     /locus_tag="VHZ56_12150"
     CDS             3805..5031
                     /gene="fabB"
                     /locus_tag="VHZ56_12150"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HEX4298764.1"
                     /translation="MRRVVVTGMGIVSSIGNNLAEVLESLRTATPGIVFAEEYARLGF
                     RCQVHGAPRLDPFAVLDRRTTRFMGKGAAWNYIAMQQAIADSGLEEKDVKNPRTGLVM
                     GSGGPSTRTVVEAADITREKGPKRIGPLAVPKAMSSTASATLATPFGIKGVNYSITSA
                     CATSKHCIGNGYEQIQMGKQDIVFAGGHEDLDWTMSNLFDAMGAMSTDFNATPAKASR
                     AYDAARDGFVIAGGAGVIVLEELEHARARGARILAEIVGYGATSDGYDMVAPSGEGAA
                     RCMQLALETVREKIDYINPHATSTPIGDAKEMDAIRLVFGTGDKCPPISATKSLTGHS
                     LGATGVQESIYCILMMQHRFLCESANIDTLDPLFEDMPILRSRRDGVDIGVALSNSFG
                     FGGTNATLVFRHPDLI"
     gene            complement(5028..>5211)
                     /locus_tag="VHZ56_12155"
     CDS             complement(5028..>5211)
                     /locus_tag="VHZ56_12155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007199779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HEX4298765.1"
                     /translation="TDLPSCEAVGVLGPVTGVIGTLMAMEAIKLITGAGTPLVGRLLL
                     YDGRSARFTEVEYGSG"
BASE COUNT          815 a         1885 c         1706 g          805 t
ORIGIN      
        1 cagcggccgc ttccgcgggc tggccccgga actgcggcgc gagctcgagg ccgaggagga
       61 ccgcatgccc gaggatcgcg agaccatcga ggacgatacc ctgcggctga tcttcacctg
      121 ctgccatccg ctgctgccga cagacgctca ggtggcgctg acgctgcgcg aaatctgcgg
      181 cctcaccacc gaggcgattg ccgccgcgtt cctcgcccgg cccgccgcca tcgcccagcg
      241 catcgtccgc gccaaggccc gcatccgcga cgagcggctt ccctacgcgg tgccgccgcc
      301 ggccgagtgg ccggaccgcc tcgatgcggt actgcacacc atctacctga tcttcaacga
      361 gggctatgac gcctcgagcg gcgacgtcct gatccgccac gagctctgcg ccgaggccat
      421 ccgcctcgcc cggctgctgc gggccttgcg gcccagcccc gacaccgatg gtctcctggc
      481 gctgatgctg ctgcatcagt cgcgggccgc cgcccgcacc gacggcgacg gccggctggt
      541 gttgctcgag cagcaggacc gccgtctctg gaatgccgat ctgatcgccg aaggcacggc
      601 cctggcacag gcggccttcg ccgccccgcc ggtcggcagc cataccatcc aggcgtcgat
      661 cgcggcgacc cacgccgccg cgccgagtgc ggccgcaacc gactggccgc gcatcgccgg
      721 cctctacgac ctgctgctgc gcgccgagcc gtcgccggtg gtcgagctca accgcgcggt
      781 cgccatcgcc atgcgcgacg gtcccgaggc cggcctggcg ctgatggcgc cgctcgccgc
      841 cggaccgctt gccgcctatc gcttcgccca cgccgcgcga gccgatctgc tgcgccgcgc
      901 cgggcgtctc gacgaagccc ggagcgccta tgcccgggcc atcgagctga ccgtccaggc
      961 gaccgaccgg gactacctcg agcggcggct gcgcgagctc ggctaggccc gcgcccgggt
     1021 ttcgggcagc acccggtgcg gcggctggtg gccatcgacg aaggcgcgga tgttgacgat
     1081 caccgtgtcg cccatctcca gccgcgcctc gagcgtcgcc gacgccatgt gcggggtgag
     1141 cacgatgcgg tgggcgcgcg ccagttcgag caaggccggg gagatgccgc tgccgctctc
     1201 gaacacgtcg agcgcggcgc cctgcagccg ccccgccgcc agcgcgtcga ccagcgccgc
     1261 ctcgtcgatc agctccggcc ggctgacatt gaccacatag ccctcgggtt tcatccgccc
     1321 cagccgctcg cggctgagga tatggtaggt gtcgcgggtg agaggcgtgt gcagcgacag
     1381 gatgtcgacc gcccccagca tctcgtcgag gtcgtggtgg aacaccgcct ccagccggtc
     1441 ctcgagctgc ggcggccgcc ggttgcgcga gaaatagtgg atggtcagcc cgaacgtccg
     1501 cgcccgcgcc gccaccgcgc tgccgatgcg tcccatgccg acgatgccca gcgccttgcc
     1561 gcgcagccgc cggccgagca tccaggtcgg cgaccagccc ggccattcgc cgtcgcgcgg
     1621 cagcacctcg gcgccctcga ccagccgccg cggcagcgcc agcatgagca tcatcgccat
     1681 gtcggcggtg tcctcggtga gcacgctcgg cgtgttggtg accgtcagcc cggcggcata
     1741 ggcggcctcg atatcgatat tgtcgaagcc gttgccgaac tgcgcgacga gccgcacgct
     1801 cggcggcagc cgcgcgatga ggtcggcatc gatacggtcg gtgatcgagg agaccagcac
     1861 gtcgcgacct tcgagggcct cgatcagcgc ggcggcggca tagggcgtgt cgtcatcgtt
     1921 gaggcgggcg tcgaacagcg tcgccatccg ctcctcgacc ggcgccggca gccgccgcgt
     1981 caccaggatt ttgggtttgg cggtcgtcag ggggcacgcc tttcaaggac cattaaggtc
     2041 tgttggctaa cgatagggaa aaagcgcgac ccttccaagc catacccatc gatgagtggt
     2101 cctgccgtga tcgaccgtgc tttgccggcg cttgccgccc tgttgctcct gtccgccccg
     2161 gcgctggccg gcaccgacga caatccgagc ggcctgccgc tgccgcgctt cgtcaccacc
     2221 cgctccgatc ccatcaatgt ccgggtcggg ccgggcgtgc agtacaacct cgcctgggtc
     2281 tacaacgtcg ccggcacgcc ggtcgagatc gtccaggaat tcgacgtctg gcggaagatc
     2341 cgcgacgtcg acggctccga aggctgggtg caccagaaca tgctgtcgag cgcccgcgcc
     2401 ggctatgtca gccaggatgc cggcaaccag gtcggcctgc gcgccggcgc ctccgacgat
     2461 gccggcgtcg tcgcctgggt cgctccgggc tttccggtca agatcagcag ctgcgatggc
     2521 aattggtgcg cggtagtggc gaccgatcat ccggccgacg gccatcccgc caattattcg
     2581 ggctatctgc cggagggcga cctctggggc gtcgtcaagg gcgagacctt cgactagtcg
     2641 tccgaaagcc ggccggcgcc ctcgggaccg cgggccttct tcacccgcac caccacgtcg
     2701 acatgcgtca ccgacatgcc cggcggtggc gccggcaggt tctggatgac gatcgccgag
     2761 gcggggatgt cgatcacccg ctgctcgtcc tcgagataga aatggtggtg gtccgaggta
     2821 tcggtgtcga aatagctgcg cgacgcatcg accgccacct cgcgcagcag cccggccatg
     2881 cggaactggt gcagcgtatt gtagatggtg gccagcgaca cgttcacctt ggccgcgtcg
     2941 gcttccccca gcagctgctc ggcgctcaca tgccggtgcg cgccgccgaa caggatctcg
     3001 gccagcgcca cgcgctgccg cgtcggccgc aatcctgcca tcctcagcac cgccgtgagg
     3061 cacggccggc gcgagggcac gttgcggctg aacatgtggc ggtcgtgcat gagggcctgg
     3121 aaaactcgac ttttcgcgga aacttatagc ttttggcccg gttgcgcaca agcggcaggg
     3181 atgtcgcgcc ggccgcgctt gaccccccgg gacgcggcca atacacacgg cccaccttaa
     3241 ccattcggga tctgccaatg gcggagcgcc agaacgccta ttccttcgag gaactgcttg
     3301 cctgcggacg gggcgagctg ttcggcccgg gcaacgccca gctgcccctg ccgccgatgc
     3361 tgatgttcga ccgcatcacc cacatcgacg agacgggcgg cagccacagc cggggccagg
     3421 ttcgcgccga gctcgatatc cgtccggacc tgtggttctt caagtgccac ttcgagggcg
     3481 acccggtgat gcccggctgc ctcggtctcg atgcgctgtg gcagatgacc ggcttcttcc
     3541 tcggctggag cggctcgctg ggccgcggcc gggcccgcgg cggcggcgac atcaagttca
     3601 gcggtcaagt caccaatgac gtgaagctgc tcgaatatgg cgtcgacatc aagcgcgtca
     3661 tgcgctcgaa agtgacgctc ggcatcgcag aggggtttgt gaaggccgac gggaagttga
     3721 tctacgaggc caaggacctc agggtcgggc tgtttgtcgg cgcgcaacag ccggcaaccg
     3781 tcgaataagg ggggacgctt gggcatgagg cgagtcgtcg tcaccggcat ggggatcgtc
     3841 tcctccatcg gcaacaatct ggccgaggtg ctggaaagcc tgcggaccgc cacgccgggc
     3901 atcgtcttcg ccgaggaata tgccaggctc ggcttccgct gccaggtgca cggcgccccc
     3961 aggctcgatc cgttcgccgt gctcgaccgc cgcaccaccc gcttcatggg caagggcgcc
     4021 gcctggaact acatcgccat gcagcaggcg atcgccgatt ccggcctcga ggaaaaggac
     4081 gtcaagaatc cgcgcaccgg cctggtgatg ggttcgggcg gaccctcgac ccgcaccgtg
     4141 gtcgaagccg ccgacatcac ccgcgaaaag ggccccaagc gcatcgggcc gctcgccgtg
     4201 cccaaggcga tgagctcgac ggcctcggcg acgctcgcca cgcccttcgg catcaagggc
     4261 gtcaattatt cgatcacctc cgcctgcgcc acctccaagc actgcatcgg caacggctac
     4321 gagcagatcc agatgggcaa gcaggacatc gtctttgccg gcggccacga ggatctcgac
     4381 tggaccatgt cgaacctgtt cgacgccatg ggcgccatgt cgaccgattt caacgccact
     4441 ccggcgaaag cctcgcgtgc ctacgacgcc gcccgcgacg gcttcgtcat cgccggtggc
     4501 gccggcgtca tcgtgctgga agagctcgag cacgcccgcg cccgcggcgc tcgcatcctt
     4561 gccgagatcg tcggctacgg cgccacctcc gatggttacg acatggtggc gccctccggc
     4621 gaaggcgccg cccgctgcat gcagctggcg ctcgagacgg ttcgcgagaa gatcgactac
     4681 atcaacccgc acgccacctc gacgccgatc ggcgacgcca aggaaatgga cgccatccgc
     4741 ctggttttcg gcaccggcga caaatgcccg ccgatttcgg ccaccaagtc gctgaccggc
     4801 cactcgctcg gcgcgaccgg cgtgcaggaa tcgatctact gcatcctcat gatgcagcac
     4861 cggttcctct gcgaaagcgc caacatcgat accctcgatc cgctgttcga ggacatgccg
     4921 atcctcagga gccgccgcga tggtgtcgac atcggcgtgg cgctgagcaa cagcttcggc
     4981 ttcggcggca ccaacgccac cctggtgttc cggcatcccg acctgatcta gccggaaccg
     5041 tattccactt cggtgaaccg cgcgctgcga ccgtcataga gcagcagccg gcccaccagc
     5101 ggcgttcccg cgccggtgat cagcttgatc gcctccatcg ccatcagcgt gccgatgacg
     5161 ccggtcaccg gaccgagcac gcccaccgcc tcgcagctcg gcaggtcggt c
//
LOCUS       DATAZA010000487         4480 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3324643, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000487 DATAZA010000000
VERSION     DATAZA010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4480)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4480)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4480
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3324643"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1260)
                     /locus_tag="VHZ56_12160"
     CDS             complement(<1..1260)
                     /locus_tag="VHZ56_12160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012490347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX4298766.1"
                     /translation="MIADLIAWQARVRPAKTAVVELATGARVSHAGLDRLAGQAAAWL
                     GAKLGDTAGQRVAFLGRNSVALLALSLAAERAGAIFVPLNWRLAAPEIAALLADCAPA
                     LVVGDDEFATGIAARISTGDFLAAASACEPAAAAPGADPHRPIILLYTSGTTGRPKGV
                     IVTAANAAAAALNFAFVGEVGADAVALSDLPMFHTIGLIAVARTTLSLGGTLVVSDRF
                     QPGRTLRALGDPGLGISHYFAVPVMIEALQHDPAFAPEALARLRAIFVGGAPLAPGLV
                     ERFLDLGVPLVNGYGMSEAGTVMHVPLAREAVRAGVGTVGLPAPEMEVRLVRDGGDVA
                     AGEVGEVWLRGPAVTPGYWQRPAETAAAFAGGWYRTGDLARREPNGFYRIVDRLKDMY
                     VSGGENVYPAEIEAVLAAHPDIADAAVL"
     gene            complement(1288..1908)
                     /locus_tag="VHZ56_12165"
     CDS             complement(1288..1908)
                     /locus_tag="VHZ56_12165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003516625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HEX4298767.1"
                     /translation="MADDKTADVSWEELRPQLIKMALELGPLVVFFIVNARADIFVGT
                     AWFMGAMVLALALSWLLLKRIAVMPLVTAVVVLVFGGLTLYFHDDTFIKMKPTIVDAL
                     FGAVLLGGLVFHQSLLRYVFGEVYKLKPEGWTVLTLRWGVFFFFLAALNEVVWRTQST
                     DVWIAFKVWATMPVTIIFAALQLPVLTKYAPDHKVHEIVPPLDPLP"
     gene            complement(1909..2961)
                     /gene="ftsY"
                     /locus_tag="VHZ56_12170"
     CDS             complement(1909..2961)
                     /gene="ftsY"
                     /locus_tag="VHZ56_12170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016918135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEX4298768.1"
                     /translation="MADPKPGLLQRLFGGEAPIAPPAPPPPPEEAPGPPEALPPVTPA
                     PKASWLQRLATGLKRSSDQLSGGIASIFTKKKLDQAMLDELEDVLIQADFGLDMAADV
                     TAALRRDRFERDISSDDVRDLLSGAVRQVLEPVARPLLIDAARRPFVILMVGVNGSGK
                     TTTIGKLASLYGAQGRKVMLAAGDTFRAAAIEQLQVWGRRTGAPVVAGAQGADASGLA
                     FEALTEARAAGSDILIIDTAGRLQNRDELMGELEKIIRVIKKVDPSAPHATLLTLDAT
                     TGQNALNQVEIFGRRAGVTGLVMTKLDGTARGGILVAIARKFGLPVHFIGVGEGVDNL
                     EPFAAEDFARAIVGEV"
     gene            complement(2961..4226)
                     /gene="mtaB"
                     /locus_tag="VHZ56_12175"
     CDS             complement(2961..4226)
                     /gene="mtaB"
                     /locus_tag="VHZ56_12175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008548836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HEX4298769.1"
                     /translation="MGVETLTFGCRLNANESEVIRAEAEKAGLADALVVNTCAVTAEA
                     VRQAKQAIRKARREQPGRRIIVTGCAAQTSPRDFADMAEVDLVIGNADKLTAAAYAPM
                     AFGVKLNDKVQVNDIMAVREQAGHLIEGMDGRARAFVQVQNGCDHRCTFCIIPYGRGP
                     SRSVPMGAVVEQVKRLVGNGYRELVLTGVDITSYGGDLPGQPSLGRLVQAILRHVPDL
                     PRLRLSSIDSIEADEALYEALGSDRRLMPHLHLSLQSGDDLILKRMKRRHLRADTLDF
                     VARVRALRPDMVFGADLIAGFPTETEAMFENSLRIVGEAGLTYLHVFPFSPREGTPAA
                     RMPQVPRGIARERAARLRTLGEAQHEAFRQSRVGQVEAVLVERDGLGRTEQFMPIAVP
                     GHGPGEIVAVRVTGVTEDGLAGEPMRTAA"
     gene            complement(4226..>4480)
                     /locus_tag="VHZ56_12180"
     CDS             complement(4226..>4480)
                     /locus_tag="VHZ56_12180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008127214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEX4298770.1"
                     /translation="IIVRTWERGAGLTRACGTAACAALVNAARTKRTGRKATVTLPGG
                     DLAVEWRADDHVMLTGPAEYEFSGAFNPQSGSWSRDRVDA"
BASE COUNT          668 a         1708 c         1449 g          655 t
ORIGIN      
        1 cagcaccgcc gcatcggcga tgtccggatg ggccgccaga accgcctcga tttcggccgg
       61 atagacgttc tcgccgcccg acacgtacat gtccttgagc cggtcgacga tgcgataaaa
      121 gccgttcggc tcgcgccgcg ccaggtcgcc cgtgcggtac cagccgccgg cgaacgccgc
      181 tgccgtctcg gccgggcgct gccagtagcc gggcgtcacc gccggaccgc gaagccagac
      241 ttcgccgacc tcgccagcgg cgacatcgcc gccgtcgcgc accagccgca cctccatctc
      301 cggcgccggc aatcccaccg tgccgacgcc cgcgcgcacc gcttcgcgag cgagcggcac
      361 atgcatcacg gtgcccgcct cgctcatgcc gtagccgttg accagcggca cgcccaggtc
      421 gaggaagcgc tcgaccagcc ccggtgccag cggcgccccg ccgacgaaga tcgcccgcag
      481 ccgcgccagc gcctcgggcg cgaaggccgg gtcgtgctgc agcgcctcga tcatcaccgg
      541 caccgcgaaa tagtggctga tgccgaggcc cggatcgccg agcgccctga gcgttcgccc
      601 cggctggaag cggtcgctga ccaccagcgt gccgccgagg ctcagcgtcg tccgcgccac
      661 cgcgatgagc ccgatggtgt ggaacatcgg caggtccgag agcgccaccg cgtcggcccc
      721 gacctcgccg acgaaggcga aattgagcgc cgccgccgcc gcgttcgccg ccgtcacgat
      781 gacgcccttc ggccgcccgg tggtgccgga ggtgtagagc aggatgatcg gccggtgcgg
      841 atcggctccg ggcgcggcag ccgccggttc gcatgccgat gcagcggcga ggaagtcgcc
      901 ggtcgaaatc cgcgccgcga tgccggtggc gaactcgtcg tcgccgacga ccagcgccgg
      961 cgcgcaatcc gcgagcagcg ccgcgatctc cggcgccgcc agccgccagt tgagcggcac
     1021 gaagatcgcg cccgcccgct cggcggcaag gctcagcgcc agcagcgcca cgctgttgcg
     1081 gccgaggaag gcgacgcgct gccctgccgt gtcgccgagc ttcgcgccga gccacgccgc
     1141 cgcctgcccg gccagccggt cgaggccggc atggctgacc cgggcgccgg tcgcgagctc
     1201 gaccaccgct gtcttggctg gacgaacacg cgcctgccag gcgatgaggt cggcgatcac
     1261 gcgctcctcc cgcaccctcg ctcgccgcta cggcagcggg tccagcggcg gcacgatttc
     1321 gtgcaccttg tggtccggcg cgtacttggt cagcaccggc agctgcagcg ccgcaaagat
     1381 gatggtgacc ggcatcgtcg cccacacctt gaaggcgatc cacacgtccg tgctctgcgt
     1441 ccgccacacc acctcgttca gcgccgcgag gaagaagaag aacacccccc agcgcagcgt
     1501 cagcaccgtc cagccttccg gcttcagctt gtagacctcg ccgaacacgt agcgcagcag
     1561 cgactggtgg aacaccagcc cgcccagcag cacggcgccg aacagcgcat cgacgatcgt
     1621 cggcttcatc ttgatgaagg tatcgtcgtg gaagtagagc gtcagtccac cgaacaccag
     1681 caccaccacc gccgtcacca gcggcatcac cgcgatgcgc ttcagcagca gccagctcag
     1741 cgccagcgcc agcaccattg cgcccatgaa ccaggcggtg cccacgaaga tgtcggcgcg
     1801 cgcattgacg atgaagaaca ccaccagcgg cccgagctcg agcgccatct tgatcagctg
     1861 cgggcggagt tcctcccagc tcacatcggc cgtcttgtcg tccgccatct agacctcgcc
     1921 cacaatggcg cgggcgaaat cctcggccgc gaacggctcc agattgtcga cgccctcgcc
     1981 gacgccgatg aagtgcaccg gcaaaccgaa tttccgcgcg atcgccacca ggatgccgcc
     2041 gcgcgccgtg ccgtccagct tggtcatcac cagcccggtg acgccggcgc gccggccgaa
     2101 gatttcgacc tgattgagtg cgttctgtcc agtcgtcgcg tcgagcgtca gtagcgtcgc
     2161 atgtggcgcg ctcggatcga ccttcttgat cacccggatg atcttttcga gctcgcccat
     2221 cagctcgtcg cggttctgca gccgtcctgc cgtatcgatg atgaggatat cgctgccggc
     2281 tgccctcgcc tcggtcagcg cctcgaacgc cagcccggac gcatccgcgc cctgtgcccc
     2341 ggcaacgacc ggtgcgccgg tgcgccggcc ccagacctgc aattgctcga tcgccgcggc
     2401 gcggaacgtg tcgcccgccg ccagcatcac cttgcggccc tgcgccccgt agaggctcgc
     2461 cagcttgccg atggtcgtgg tcttgcccga cccgttcacc ccgaccatca ggatgacgaa
     2521 tggccgcctg gcggcatcga tcagcagcgg ccgcgccacc ggttccagca cctgcctgac
     2581 cgcccctgac aggaggtcgc ggacgtcgtc gctcgaaatg tcgcgctcga accggtcgcg
     2641 gcgcagcgcc gccgtcacgt cggccgccat gtcgagcccg aaatcggcct ggatcagcac
     2701 atcctcgagc tcgtccagca tcgcctggtc gagctttttc ttggtgaaga tcgacgcgat
     2761 cccgccactc agctggtccg aggaccgctt gagcccggtt gccagccgct gcagccagct
     2821 cgccttgggt gccggcgtca ccggcggcag cgcctcggga ggacccggcg cttcttccgg
     2881 cggaggcggt ggggccggcg gggcaatggg cgcctcgccg ccgaacagcc gctgcagcag
     2941 cccgggcttg gggtcggcca tcaggcggcg gtccgcatcg gctcgccggc gagcccgtct
     3001 tccgtcaccc cggtgacccg caccgcgacg atctctcccg gcccgtggcc gggcacggcg
     3061 atcggcatga actgctccgt ccgtcccagc ccgtcgcgtt cgaccaagac ggcttcaacc
     3121 tgcccgacgc ggctctggcg gaatgcctcg tgctgcgcct cgcccagcgt cctgagccgc
     3181 gccgcccgct ccctggcgat gccgcgcggc acctgcggca tccgcgccgc cggcgtgccc
     3241 tcgcgcggcg agaaggggaa gacgtggagg taggtgagcc ctgcctcgcc cacgatccgc
     3301 agggaatttt cgaacatcgc ctcggtttcc gtcgggaagc cggcgatgag atcggccccg
     3361 aacaccatgt ccggtcgcag cgcccgcacc cgggccacga aatccagcgt gtcggctctg
     3421 aggtgccgcc gcttcatgcg cttgaggatc aggtcgtcgc ccgactgcag gctgagatgg
     3481 aggtgcggca tcagccgccg gtcggatccg agcgcctcgt agagcgcctc gtcggcctcg
     3541 atcgaatcga tcgacgagag cctgagccgc ggcaggtccg gcacgtgccg caggatcgcc
     3601 tgcaccagcc ggccgaggct cggctggccc ggcaggtcgc cgccatacga ggtgatatcc
     3661 actcccgtca gcaccagctc gcgatagccg ttgcccacca gccgcttcac ctgctcgacc
     3721 acggcgccca tcggcaccga ccgcgacgga ccgcggccgt agggaatgat gcagaaggtg
     3781 cagcggtggt cgcagccgtt ctgcacctgg acgaacgccc gcgcccgccc gtccatgccc
     3841 tcgatcaggt ggcccgcctg ctcgcggacg gccatgatgt cgttgacctg caccttgtcg
     3901 ttgagcttca ccccgaacgc catcggcgca taggccgccg ccgtcagctt gtcggcattg
     3961 ccgatcacca gatcgacttc ggccatgtcg gcgaaatcgc gcgggctggt ctgcgccgcg
     4021 cagccggtaa cgatgatccg gcgtccgggc tgctcgcgcc gcgctttgcg gatcgcctgc
     4081 ttggcctgcc gcacggcttc cgccgtcacc gcgcaggtgt tgaccacgag cgcgtccgcc
     4141 agccccgcct tttcggcctc ggcccggatc acctcggatt cgttggcatt gaggcggcag
     4201 ccgaaggtga gggtctcgac gcccatcagg cgtcgaccct gtcgcggctc cagctgcccg
     4261 attgcgggtt gaaggcgccg gaaaactcgt attctgccgg cccggtcagc atcacatggt
     4321 cgtcggcgcg ccactccacc gccagatcgc cgcccggcag cgtcacggtg gccttgcgcc
     4381 cggtccgctt cgtgcgcgcc gcattgacca gcgccgcgca cgccgctgtg ccgcacgccc
     4441 gcgtcagccc ggcgccgcgc tcccaggtgc gcacgatgat
//
LOCUS       DATAZA010000488         1597 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3324945, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000488 DATAZA010000000
VERSION     DATAZA010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1597
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3324945"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..621
                     /locus_tag="VHZ56_12185"
     CDS             <1..621
                     /locus_tag="VHZ56_12185"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003402939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX4298771.1"
                     /translation="RSPDGAVLPGYGWIFPLGNGEVNIGVGALSTSKRPAELALRPLM
                     SYYADLRRDEWGFQGQPRAMSSALLPMGGAVSGVAGRNWMLIGDAAACVNPLNGEGID
                     YGLETGRLAVEMLGSGDLSKAWPHTLQSHYGRGFSVARRLGLLLTFPRFLPAAGPIAM
                     RSTTLMGIAVRVMGNLVTDDDADWVARVWRGSGLTSRLIDRRKPFS"
     gene            complement(618..>1597)
                     /locus_tag="VHZ56_12190"
     CDS             complement(618..>1597)
                     /locus_tag="VHZ56_12190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007534411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX4298772.1"
                     /translation="LDYSVELALRAERSGFGGALIGTGWGRPDSFAIATAIAARTTTF
                     APLVAIRPGYWNPAHFASAAATLDQLSRGRLLVNVVTGADDARAYGDVDLDKSSRYDR
                     TREFLQLIRRLWREEDVTFDGEYFSVEHSTLEPRTFGADEGRHPKLYFGGASAAAEEV
                     AAEEADVQLFWGEPLDGIAERIERLNALSEKLDRGHAPLEYGLRVTTLVRDTSEQAWR
                     DAEAKVAELAGKPSVLLLHNAGSAEGQRRLSDLAGRGEVLDSCLYTTPSKYGGEGAGT
                     TWLVGSAAEVAAALQKYRDLGVTHFILSDTPYLPEVSRIGDQVLPLLRN"
BASE COUNT          230 a          529 c          564 g          274 t
ORIGIN      
        1 cgctcgcccg acggcgcggt gctgcccggc tacggctgga tcttcccgct gggcaacggc
       61 gaggtgaaca tcggcgtggg cgcgttgtcc acctcgaagc ggcccgccga attggcgctg
      121 cgaccgctga tgtcgtatta cgccgacctg cgtcgggacg agtggggctt ccaaggccag
      181 ccgcgtgcga tgtcatcggc gctgctgccg atgggcggcg cggtctcggg cgtggccggc
      241 cggaactgga tgctgatcgg cgacgccgcc gcctgtgtca acccgctgaa cggcgagggc
      301 atcgactatg ggctggagac cggccggctg gccgtcgaga tgctcggctc cggcgatctg
      361 tcaaaggcct ggccgcacac cctgcaatcc cattacggcc gagggttttc ggtggcccgc
      421 cggctggggt tgttgctgac gttcccgcgg ttcctgcccg cggcgggccc gatcgctatg
      481 cgctcgacga cgctgatggg catcgcggtg cgggtgatgg gcaacctggt caccgacgat
      541 gacgccgact gggtggcgcg ggtatggcgc ggcagcgggc tgacctcgcg actaatcgat
      601 cgccgaaaac cgttcagcta attgcggagt agcggcagaa cctggtcgcc gattctggac
      661 acctcgggca gatagggcgt gtccgagagg atgaaatgcg tgacgcccag gtccctgtac
      721 ttctgcagag cagcggccac ttcggcggcc gatccgacca gccacgtcgt tccggctccc
      781 tcgccgccgt atttactcgg cgtggtgtac aggcaggagt cgagaacttc tccgcggccg
      841 gcgagatcgc tcagccgtcg ctgcccctcc gccgatccgg cattgtgcag cagcaacacc
      901 gacggcttgc cggccagttc ggcgaccttg gcctcggcgt cgcgccatgc ctgttccgag
      961 gtgtcgcgaa ccaacgtcgt cacccgcagg ccgtactcca acggcgcgtg cccgcggtcg
     1021 agtttctcgg acaacgcgtt gagccgttcg atgcgttcgg cgatcccgtc gagtggctca
     1081 ccccagaaca attggacgtc ggcctcctcg gccgcgactt cttccgcagc ggccgatgcg
     1141 ccgccgaagt acagcttcgg atgacggcct tcgtcggcgc cgaaggttcg cggctccagc
     1201 gtcgagtgtt cgacggagaa gtattcgccg tcgaaggtga cgtcctcctc gcgccacaat
     1261 cggcggatca gctgcaagaa ttcgcgggtc cggtcgtacc ggctcgactt gtcgaggtcg
     1321 acgtcgccgt acgcccgggc gtcgtcggct ccggtgacca cgttcaccag tagccggccg
     1381 cggctgagct ggtcgagggt ggcggcggcg ctggcgaagt gcgcggggtt ccagtagccg
     1441 gggcggatgg cgaccagcgg ggcgaacgtc gtggtccgtg cggcgatcgc ggtggcgatg
     1501 gcaaacgagt cgggcctgcc ccaacccgtg ccgatcagcg cgccgccgaa gccgctccgc
     1561 tcggcgcgta gcgccagttc gactgagtaa tccaggc
//
LOCUS       DATAZA010000489         6358 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_423285, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000489 DATAZA010000000
VERSION     DATAZA010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6358
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_423285"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..330)
                     /locus_tag="VHZ56_12195"
     CDS             complement(<1..330)
                     /locus_tag="VHZ56_12195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4298773.1"
                     /translation="MRLKLEKRAEPSRFMIYATPVGAVLLTMIVGAIIFSLIGYNGLN
                     AVYQVFIAPLTQTYKWQDIALKASPLILIGVGLAVGNRAAIWNIGAEGQYILGALGGV
                     GVGILTLN"
     gene            complement(320..1888)
                     /locus_tag="VHZ56_12200"
     CDS             complement(320..1888)
                     /locus_tag="VHZ56_12200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4298774.1"
                     /translation="MPPRLSLRGITKRFPGVLANDDVSFEVKPGEIHALLGENGAGKS
                     TLVKMIYGIMQPDAGEILWNGERVQIGNPKAARRLGIGMVFQHFSLFEALTVLENIAL
                     GMDAKIPQRELEASIRQVMARYGLTLDPQRTVATLSVGERQRIEIVRALLLNPKLLIM
                     DEPTSVLTPQEVEQLFLVLRRLAKDGCSILYISHKLHEIKALCETATILRSGRLVDTC
                     DPRVETSRSMAEKMIGGNLKDIQKATGRVFGAEKLAVDRLSMQGAGPFGIALKDIAFT
                     VRAGEIFGIAGVAGNGQNALLLALSGEVLGSDAGSIRIDGKPIGRLGAKQRRLKGLAS
                     VPEERNGHAAVPDFSLADNSVLTARDRLKLAISGIVRPGAARKYTGQIIDTFAVKATG
                     TGATAGSLSGGNLQKYIMGREILQRPEVLVVCQPTWGVDAGAAAAIHQALVDLAAAGS
                     AIVVISQDLDELLELSDSIAVINGGRLSRAMAVSGVDINEIGLLMGGLHGEGQASPAT
                     AAVVPIGAEAIHAA"
     gene            complement(1890..2747)
                     /gene="xdhC"
                     /locus_tag="VHZ56_12205"
     CDS             complement(1890..2747)
                     /gene="xdhC"
                     /locus_tag="VHZ56_12205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007008866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0009115 - xanthine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0065003 - protein-containing complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase accessory protein XdhC"
                     /protein_id="HEX4298775.1"
                     /translation="MRAAELQGFVASHPDTIVAELTAVRGSSPRERGAFMVVASDALA
                     GTIGGGALEYMVIARARQALRDGEEPEGLDIPLGPEIGQCCGGRVEVSLQRLAAGAVE
                     RLVGRLSASEAALPHVYLFGSGHVGKALARALAALPLNVHVVDTRPDELTDLPAAVEA
                     RAVPMPEAVVRTAPRGSAYVILTHDHALDFLIAAEALKRADAPYVGMVGSRTKRAKFS
                     NWYMAEGGSREALRRLVLPIGSFGLVDKRPEVIAALAAAEIMVHIGRGEASEMCVPDS
                     VSTMGAAVD"
     gene            complement(2747..5089)
                     /gene="xdhB"
                     /locus_tag="VHZ56_12210"
     CDS             complement(2747..5089)
                     /gene="xdhB"
                     /locus_tag="VHZ56_12210"
                     /EC_number="1.17.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010975647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004854 - xanthine dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0009115 - xanthine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase molybdopterin binding
                     subunit"
                     /protein_id="HEX4298776.1"
                     /translation="MNKLDIVAPGKAKGGRLHESVPHDSAVKQVAGRAEYVDDLTEPE
                     GTLHAYLGLSSRAHAEIAAIDLEAVRHAPGVVGVLTAADVPGENDVSSVHKHDEPVFA
                     ETTVSYWGQSLFCVVAATRDAARRAAKLAKIEYRDLPHVTDVATSLRAGGRLVTEPMT
                     LERGDVEAGLAASEHRARGTVTIGGQEHFYLESQVALAVPGEDDEVTLHVSTQHPTEI
                     QVMVAQVLGIPHAAVTVNMRRMGGGFGGKETQGNLFAAVAALAARRFGRAVKIRPDRD
                     DDFQITGKRHDFVVSYDVGYNSDGRIQAVAATFAARSGYSADLSGPVTDRALFHADNA
                     YWYPAVRLNSLPLHTNTVSNTAFRGFGGPQGVIGCERWIEHIAYALGKDPLEIRKANF
                     YGTTSNNITPYHQPVEDNIIHRIVDDLERDSDYQARRQAVLAFNREHKILKKGIALTP
                     VKFGISFTATWHNQAGALVHVYRDGSIHLSHGGTEMGQGLHVKVAQVVAEAFGVDLEQ
                     VKINATNTAKVPNTSATAASSGTDLNGMAALNAAEQIKARMHAHAARIYEVEPDDVHW
                     EFGGIRAGKQFVPFEELATSCWMNRVQLSAAGFYSTPKIHWDRASGRGHPFYYFAYGA
                     AVAEVTIDTLTGEYQFDRADVLEDVGHSLNPAIDIGQVEGGYIQGVGWLTTEELWWDD
                     RGQLRTHAPSTYKIPVASDVPREFNAKLAEWSVNKEPAIGRSKAVGEPPLVLGYSVVE
                     ALSMAVASVADYRIAPDLDMPVTPERVLMGVERMRRERAS"
     gene            complement(5089..>6358)
                     /gene="xdhA"
                     /locus_tag="VHZ56_12215"
     CDS             complement(5089..>6358)
                     /gene="xdhA"
                     /locus_tag="VHZ56_12215"
                     /EC_number="1.17.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018237436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004854 - xanthine dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0009115 - xanthine catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="xanthine dehydrogenase small subunit"
                     /protein_id="HEX4298777.1"
                     /translation="YETINACICFMGMLHGSHVVTIEHLSPPNGPLHPVQQAMVDFHG
                     SQCGFCTPGIVMSLYALWMQSPRPSVAEIEVALQGNLCRCTGYAPIVRAGQAMSNYGQ
                     VEADPLMLHRRQTIARLQALDDGQTVEIGEGRNRLIVPATVDALAEAYAANPGGTLVS
                     GATDVGLWVTKFMRDIGPMLHIGGLAGLQRIEETEAGLTLGAGVTYTAARDAIVRHFP
                     QLRELWDRIGGAQVRNAGTVGANIANGSPIGDTPPPFMALGAQITLRKGTQRRDVKLK
                     DFFIAYGKQDRQPGEFIESVTIPYLPAGEQFACYKVTKRKDEDISALCGAFRVFVNDD
                     GAVGMVRIAFGGMAATPRRARAVEDALVGRPWATATIEAAMPAFAEDFQPLTDMRASK
                     EYRLLAAQNLLRRFHLETTGSVERLSKAVA"
BASE COUNT         1028 a         2263 c         1963 g         1104 t
ORIGIN      
        1 gttgagcgtc aggatgccga cgccaacccc gccgagtgcc ccgaggatgt attgcccctc
       61 ggcaccgatg ttccatatcg ccgcccggtt gccgacggcc agcccgactc cgatcaggat
      121 cagcggcgat gccttgagcg caatgtcctg ccacttgtag gtctgcgtca gcggcgcgat
      181 gaagacctgg tacacggcat tgagaccgtt gtagccgatg agcgaaaaga tgatggcgcc
      241 gacgatcatg gtgagcagca ccgcgcccac cggtgtcgca tagatcatga agcggctcgg
      301 ttccgcccgc ttttcgagct taagccgcat ggatcgcctc cgcgccgatg ggaacgaccg
      361 ccgccgtcgc aggactggct tgcccctcgc catggaggcc gcccatcagc aacccgatct
      421 cgttgatgtc gacgccgctg accgccatcg cccggctgag ccgtccgccg ttgatcaccg
      481 cgatgctgtc gctgagctcg agcagctcat cgaggtcctg gctgatcacc acgatcgccg
      541 agcccgcggc agcgagatcg accagcgcct gatgaatggc cgcggcagcg ccggcgtcca
      601 cgccccacgt gggttggcac accacaagca cctccggccg ctgcaggatc tcgcgaccca
      661 tgatgtattt ctgcaggttg ccgccggaaa gtgacccggc ggtcgccccg gtgcccgtcg
      721 ccttgaccgc gaaggtgtcg atgatctgcc cggtgtactt gcgcgccgcc cccggccgga
      781 caatcccgga aatcgcgagc ttcagacgat cgcgcgcggt cagcaccgag ttgtcggcga
      841 ggctgaaatc cggcaccgcc gcgtggccgt tgcgctcctc ggggacgctc gccaggccct
      901 tcaggcgacg ctgcttggcg cccagtcggc cgatcggctt tccatcgatg cggatcgatc
      961 cggcgtcact gccgaggacc tcgcccgaaa gtgccagcag cagcgcgttc tgcccgttgc
     1021 cggcaacccc ggcgatgccg aagatttcgc ctgcccgcac cgtgaacgcg atgtccttca
     1081 gtgcaatgcc gaaaggtccc gctccctgca tgctcagccg gtcgactgcc agcttttcgg
     1141 caccaaacac gcgaccggtg gccttctgga tgtccttgag gttgccgccg atcatctttt
     1201 cggccatcga ccgcgacgtc tcgacgcgtg gatcgcatgt atcgaccagc cggccgctgc
     1261 gcaggatggt cgctgtctca cacagcgcct tgatctcgtg cagcttgtgc gaaatgtaga
     1321 ggatcgagca cccgtccttg gccagccgcc gcaggacgag gaaaagctgt tccacttcct
     1381 gaggcgtcag caccgaagtc ggctcgtcca tgatcagcag tttcggattg agcaggagcg
     1441 cccgcacaat ctcgatgcgc tgccgttcgc ccaccgaaag cgtcgccacc gtccgctgcg
     1501 gatcgagcgt caacccatag cgcgccatga cctggcggat gcttgcctcg agttcccgct
     1561 gcgggatttt cgcgtccatg ccgagcgcga tgttctcgag cacggtcagc gcctcgaaca
     1621 gcgagaaatg ctggaacacc atgccgatgc caagccgtcg cgccgccttg ggattgccga
     1681 tctgcacccg ctcgccgttc cagaggatct ccccggcatc gggctgcatg atgccgtaga
     1741 tcatcttgac cagcgtcgat ttgccggcgc cgttctcgcc cagcagcgcg tgaatctcgc
     1801 ccggcttgac ctcgaaggaa acgtcgtcgt tcgccagcac gcccggaaag cgtttggtga
     1861 tcccgcgaag gctgaggcgc ggcgggatgt cagtcaacgg cggctcccat cgtcgatacg
     1921 gagtccggca cgcacatctc tgaagcttcc ccgcgtccaa tgtggaccat aatttccgcc
     1981 gccgccagag ccgcgatcac ctccggccgc ttatccacga gcccgaacga gccgatcggc
     2041 aggacaagtc gtcgcagggc ctcgcggctg ccgccttcgg ccatgtacca gttcgagaac
     2101 ttcgcccgct tggtgcgcga ccccaccatg ccgacatagg gcgcgtccgc acgcttcagc
     2161 gcttcggcgg caatcaggaa gtccaacgcg tgatcgtgcg tgaggatgac ataggcgctg
     2221 ccccgcggcg ccgtgcgcac cacggcctcg ggcatgggga ccgcccgcgc ttcaaccgcc
     2281 gccggcaggt ccgtgagctc atccggccga gtgtccacga catgcacgtt gaggggtagc
     2341 gccgcgaggg cgcgcgccag cgctttgccc acatgccccg agccgaaaag atagacgtgc
     2401 ggcagcgccg cctccgacgc gctgagccgc ccgaccagcc gctcgaccgc gccggcggcg
     2461 agccgctgca gggacacttc gacccggccg ccgcagcatt gcccgatctc cggcccgagt
     2521 ggaatgtcga gcccctcggg ttcttcgccg tcgcgcagag cctgccgggc ccgcgcaatc
     2581 accatgtact cgagcgctcc gccgccgatt gtgccagcca gcgcgtcgct ggcgacgacc
     2641 atgaacgccc cgcgctcccg cggcgacgat cctcgcacgg ccgtgagctc agcgacgatg
     2701 gtgtccggat gcgacgccac gaatccctgg agctcggcgg cgcgcatcag ctcgcgcgct
     2761 cccgccgcat ccgctcgacg cccatcagca cccgctcggg cgtgaccggc atgtcgagat
     2821 cgggggcgat cctatagtcg gcgacggagg ccaccgccat cgacagtgcc tcgaccaccg
     2881 agtaccccag caccagcggc ggctcgccca ccgccttgct gcgaccgatc gccggttcct
     2941 tgttcaccga ccactcggcc agcttcgcgt tgaactcgcg gggtacgtcg gaagcgaccg
     3001 gaatcttgta ggtcgacgga gcgtgggtcc gcaactgccc cctgtcatcc caccacagtt
     3061 cctcggtggt gagccagccg accccctgga tgtagccacc ctcgacctgc ccgatgtcga
     3121 tcgccggatt gagcgagtga ccgacatcct cgagcacgtc ggcgcggtcg aactggtatt
     3181 cgccggtcag cgtgtcgatg gtcacctcgg ccacggccgc accgtaggcg aagtagtaga
     3241 acggatggcc gcgtcccgac gcgcgatccc agtggatctt cggcgtcgag tagaagccgg
     3301 cggcggacag ctgcacccgg ttcatccagc acgatgtcgc cagttcctcg aacggcacga
     3361 actgcttgcc ggcgcgaatg ccgccaaact cccagtgcac gtcgtccggc tcgacctcgt
     3421 agatgcgtgc cgcatgggca tgcatgcgcg ccttgatctg ctcggccgca ttgagggccg
     3481 ccatgccatt gaggtcggtg cccgacgatg ctgccgtcgc cgaggtgttg ggcaccttgg
     3541 cggtgttggt ggcgttgatc ttcacctgct cgaggtccac cccgaacgcc tcggctacga
     3601 cctgcgcgac cttgacgtgg agcccctgcc ccatctcggt gccgccatgg ctcagatgga
     3661 tcgagccgtc gcgatagaca tgcaccagcg cccctgcctg gttgtgccag gtggcggtga
     3721 acgaaatgcc gaatttcacc ggggtcagcg cgatcccctt cttgagaatc ttgtgctcgc
     3781 ggttgaacgc cagcaccgcc tgccgtcgtg cctggtaatc ggaatcgcgt tccaggtcgt
     3841 cgacgatccg atggatgatg ttgtcctcga ccggctggtg gtagggagtg atgttgttgc
     3901 tggtcgtgcc gtagaaattt gcctttcgga tctcgagtgg atccttgccg agcgcatagg
     3961 cgatatgctc gatccagcgc tcgcagccga tgacgccctg tggtccgccg aagccgcgaa
     4021 acgccgtatt gctcaccgtg ttggtgtgga gcggcagcga gttgagccgc accgccggat
     4081 accagtaggc gttgtcggcg tgaaacagcg cccggtccgt caccggcccg ctgaggtccg
     4141 ccgagtatcc cgaccgtgcc gcgaaagtgg cggccacggc ttgaatcctg ccgtccgaat
     4201 tgtagccgac atcgtagctg acgacgaagt cgtggcgctt gccggtgatc tggaaatcgt
     4261 cgtcccgatc aggtcggatc ttcaccgccc gcccgaaccg cctggcagcg agcgccgcga
     4321 cggcggcaaa caggttgccc tgggtttcct tgccgccgaa gccgccaccc atgcgccgca
     4381 tgttgaccgt gaccgcagcg tgcgggatgc ccaggacctg cgccaccatc acctggattt
     4441 cggtcgggtg ctgcgtcgaa acgtgcagcg tcacctcgtc gtcctcgccc ggcaccgcca
     4501 gtgcgacctg gctttcgaga tagaagtgct cctgcccgcc gattgtcacc gtgcccctgg
     4561 cgcgatgctc cgacgcggcg agccccgcct cgacgtcgcc acgctccagc gtcatcggtt
     4621 cggtgaccag ccgtcctccg gccctcaacg acgtggcgac gtcggtgaca tgcggcaggt
     4681 cacgatattc aatctttgcg agcttcgccg cgcgccgcgc cgcatcgcgc gtagcggcga
     4741 caacgcagaa gagcgactgc ccccagtagc tgaccgtcgt ctcggcaaag accggctcgt
     4801 cgtgcttatg caccgatgaa acgtcgttct cgcccggcac atccgccgcc gtcagcaccc
     4861 cgacgacgcc cggcgcgtgc cgcaccgcct cgagatcgat ggcggcgatc tcggcgtgcg
     4921 cccggctgga gagccccaga taggcatgga gcgtgccctc cggctcggtc aaatcatcga
     4981 catactcggc ccgccccgcc acctgcttga cggcgctgtc gtgcggcacg gattcgtgca
     5041 gccggccgcc cttggccttg cccggcgcca cgatgtcgag cttgttcact acgccaccgc
     5101 cttgctcagc ctctcgaccg agcctgtggt ttcgagatgg aagcggcgca gcaaattctg
     5161 cgctgccagc agacgatatt ccttgcttgc acgcatgtcg gtgagcggct ggaaatcttc
     5221 ggcgaatgcc ggcatcgcag cctcgatcgt cgccgtcgcc catggccggc cgaccagcgc
     5281 atcctcgacc gccctggcgc gcctgggcgt tgccgccatt cccccaaacg cgatccgcac
     5341 catccccacc gcgccatcgt cattgacgaa cacgcggaac gcgccgcaaa gcgccgagat
     5401 gtcctcgtcc ttgcgcttgg tcaccttgta gcaggcgaac tgctcgcccg ccggcaggta
     5461 cgggatcgtc acgctttcga tgaactcccc tggctgccgg tcctgcttgc cgtaagcgat
     5521 gaagaaatcc ttgagcttca cgtcgcgccg ctgcgtgccc ttgcgcagcg tgatctgcgc
     5581 cccgagcgcc atgaaaggcg gcggcgtatc gccgatcggc gagccgttgg cgatgttggc
     5641 accaaccgtg ccagcattgc gcacctgcgc tccgccgatc ctgtcccaca gctcgcgcag
     5701 ttgcggaaag tgccgcacga tggcatcgcg ggccgccgtg taggtcaccc ccgcgccaag
     5761 cgtcagtccg gcctcggtct cttcgatccg ctgcagcccg gccagaccgc cgatgtggag
     5821 catcggcccg atgtcgcgca tgaacttggt cacccagagg cccacgtccg tcgccccgct
     5881 caccagcgtg ccgcccggat tggcagcata ggcctccgcc agggcgtcga ctgtcgccgg
     5941 cacgatcagc cgattgcgac cttcgccgat ctcgacggtc tgcccgtcgt cgagcgcctg
     6001 cagccgggcg atcgtttgcc gcctgtgcag catcaacggg tcggcctcga cctgcccgta
     6061 attcgacatc gcctggccgg ctcgcacgat cggcgcgtac cctgtgcagc gacaaagatt
     6121 tccctgcagc gcaacctcga tctcggcgac gctcggccgc ggcgactgca tccacagagc
     6181 atacagcgac atcacgatgc cgggcgtgca gaacccacac tggctgccgt ggaaatccac
     6241 catcgcctgc tgcaccggat gcagcggccc gttcggcggc gacaggtgct cgatggtcac
     6301 cacgtggctg ccgtgcagca tccccatgaa acagatgcag gcattgatcg tctcatac
//
LOCUS       DATAZA010000490         4456 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3670882, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000490 DATAZA010000000
VERSION     DATAZA010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4456
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3670882"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..212
                     /locus_tag="VHZ56_12220"
     CDS             <1..212
                     /locus_tag="VHZ56_12220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HEX4298778.1"
                     /translation="RHGVALGRREPLPAELAEGVFTAPVALKLVRDAGVDAPLIEAVN
                     LLLAGSTSIDKIVAGLMSRPLKREN"
     gene            214..498
                     /locus_tag="VHZ56_12225"
     CDS             214..498
                     /locus_tag="VHZ56_12225"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEX4298779.1"
                     /translation="MMFALVATDQPNCVARRKALRPEHLKHLEALGERLILAGPFLDD
                     AGESVGSIVIIEADDLAQAREMLGRDPFVRDGLFDTISIKPWKVTINNSR"
     gene            503..937
                     /locus_tag="VHZ56_12230"
     CDS             503..937
                     /locus_tag="VHZ56_12230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HEX4298780.1"
                     /translation="MAYWLMKSEPDVFSFTDLMNKPVEEWHGVRNFTARNNMQAMQLG
                     DLSFFYHSNVGKEIVGIMKVVKLAHPDSTAEPNANGKVVWQCVDVVGVEALPKPVTLE
                     TIKQTPGLADMALVKLSRLSVQPVTAEQWATVCRMGGLKKAS"
     gene            complement(951..1139)
                     /locus_tag="VHZ56_12235"
     CDS             complement(951..1139)
                     /locus_tag="VHZ56_12235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1674 domain-containing protein"
                     /protein_id="HEX4298781.1"
                     /translation="MSATPDPSKPLSDAARRALAEADARRKAADAQPMPPKEEGGRGG
                     LDPVRYGDWEVKGLATDF"
     gene            1186..2463
                     /locus_tag="VHZ56_12240"
     CDS             1186..2463
                     /locus_tag="VHZ56_12240"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013362.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HEX4298782.1"
                     /translation="MAKAKQTPGLALRLVAAERLAAVLRGASFAPLTAAELPEPRDRA
                     VANRLVTTALRHLGPLRRLCETLLVRGMPKKSGLFEPVLLLSLAQLLVLPELGAHSAL
                     FLAGEAMRADPKSQHLVKLMNGVLRTAQRQPAAVSVEADALFPPHLLVGWRAMYGVDA
                     VEAFGRALLEGAPLDVTLKADDPGLGGSPVLADTVRIVERDRAVEQLPGYADGRFWVQ
                     DAAAAIPARLMGLPTGARVLDVGAAPGGKTAQLAKAGYEVTALERDPARIERLRANLG
                     RLGYVAAIVTADALDYVPEHGFDGVLLDAPCSATGIFRRHPEVVWHRDAADIAGRVAV
                     QRQLIGRATICLNPGGVLLYCVCSLQPEEGESQAEWALSQGLEPWPITAAELGWAVPV
                     TAAGFVRTHPGQTVPGEKGGTLDGFFVARFRRR"
     gene            2531..4168
                     /locus_tag="VHZ56_12245"
     CDS             2531..4168
                     /locus_tag="VHZ56_12245"
                     /inference="COORDINATES: protein motif:HMM:NF019552.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heparinase II/III family protein"
                     /protein_id="HEX4298783.1"
                     /translation="MANPLAFLARRSAKRLADFAVSNPLIRWSWTGPSTEDYAGALSE
                     FRPTDRESLLEMMQGRYLLASKLVDTNGVSPFAIDMAHDDWLDDLQAFAWLRHFRDAR
                     NDEERGFARSLALDWIQRDGQFDRTVWGLSLTARRVLNWLRHFNILADGGNPADVAVI
                     ARALGTQIQSLKLRALFADDPVDSLMAALALLGVALCDQDRESEIGPRLERVNTLLDR
                     QIDEDGLHRSRSAKVQLMLMVELTTLRQALLRQSDAYHNELNEMLDAMHRGLDAISLG
                     TGEAAYFNGTGQMAHDIIVAVQAQSPSRARSTGTAGGYGRLLSGKSIVVADSGYVPAP
                     EYARHMHASALAFEFSHGRDLVVCNCGPAPADMEDSELLFRQGIAHSGPTINALSAAA
                     IPPRGPLAHRVVRIGRDPDIATDEADHSLAMRTHGYEERFGVALERRLTLLAEGNSLV
                     GQERMIKARGRMSGACAFRFHLAHQTQVAPAGDMLKLRLNSGAVWNFLWEGADMRIED
                     SVRQSAYFGFHRTKQIVLEALVGDVQEVSWIFTLDEG"
     regulatory      4211..4292
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01750"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="ZMP/ZTP riboswitches appear to regulate genes
                     involved in one-carbon metabolism; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="5-aminoimidazole-4-carboxamide
                     ribonucleotide (ZMP)/
                     5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl
                     5'-triphosphate (ZMT)"
                     /db_xref="RFAM:RF01750"
BASE COUNT          689 a         1444 c         1631 g          692 t
ORIGIN      
        1 accgccacgg cgtggcgctg gggcggcgcg agccgctgcc ggcggagctc gccgagggcg
       61 tattcaccgc gccggtggcg ctgaagctgg tgcgcgacgc cggcgtcgac gcgccgctga
      121 tcgaggcggt caacctgctg ctggcgggca gcacgtccat cgacaagatc gtcgcgggac
      181 tgatgtcccg cccgctcaaa cgggagaact agaatgatgt ttgcgctcgt cgctaccgac
      241 cagccgaatt gcgtggcgcg ccgcaaggcg ctccggcccg agcacctcaa gcatctcgag
      301 gcgctcggcg agcggctgat ccttgccggc ccgttcctcg acgacgcggg agagagcgtc
      361 ggcagcatcg tcatcatcga ggccgacgac ctggcgcagg cgcgcgagat gctcggccgc
      421 gacccctttg tgcgcgacgg cttgttcgat acgatcagca tcaagccgtg gaaagtgacg
      481 atcaacaaca gcaggtgagg cgatggccta ttggctgatg aaatcggaac cggatgtgtt
      541 cagtttcacc gatctgatga acaagccggt cgaggaatgg cacggggtgc gcaatttcac
      601 cgcccgcaac aacatgcagg cgatgcagct gggcgacctc agctttttct accactccaa
      661 tgtcggcaag gagattgtcg gcatcatgaa agtggtgaag ctcgcgcatc cggactcgac
      721 ggccgagccg aacgccaacg gcaaggtggt gtggcagtgc gtcgacgtgg tcggggtcga
      781 ggcgctgccg aagccggtga cgctcgaaac catcaagcag acgccggggc tcgccgacat
      841 ggccctggtc aagctgtcgc gcctgtcggt gcagccggtg acggcagagc aatgggcgac
      901 ggtgtgccgg atgggcgggc tgaagaaagc gtcgtgagcg gcgaggccgc tcagaagtcg
      961 gtcgccagtc ccttcacctc ccagtcgccg taacgcaccg gatcgaggcc accgcggccg
     1021 ccctcctcct tcggcggcat gggttgggca tcggcggcct tgcggcgggc gtcggcttcg
     1081 gccagcgccc ggcgggccgc gtcgctcagt ggtttcgatg gatcgggtgt ggcggacatc
     1141 ggtgcgcatg atatgacccg cgcaaacggc ctgtcgagga gcggcgtggc gaaagcgaaa
     1201 caaacgccgg gcctcgcgct caggctcgtg gcggcagaac ggctggcggc agtgctgcgg
     1261 ggcgcgagct ttgcgccgct gacggcggcg gagctgccgg agccgcgcga ccgggcggtg
     1321 gccaatcggc tggtgacgac ggcactgcgc catctggggc cgctgcggcg gctctgcgag
     1381 acgctgttgg tgcgcggcat gccgaagaaa tccgggctgt tcgagccggt gctgctgctc
     1441 agcctcgcgc agttgctggt gctgcccgag ctgggcgcgc attcggcgct gttcctggcc
     1501 ggcgaggcga tgcgtgccga tccgaaatcg cagcatctgg tcaagctcat gaacggcgtc
     1561 ctgcgcaccg cgcagcggca gcctgccgcg gtctcggtcg aggcggatgc gctgtttccg
     1621 ccgcacctgc tcgtagggtg gcgggcgatg tacggagtgg atgcggtcga ggcgttcggg
     1681 cgggccctgc tcgagggagc gccgctcgat gtcacgctca aagccgacga tcccggtctc
     1741 gggggcagtc cggtgctcgc cgacaccgtg cgcatcgtcg agcgcgaccg ggcggtcgag
     1801 cagctgccgg gctacgccga cggccgcttc tgggtgcagg acgcggcggc ggcgatcccg
     1861 gcgcggctga tggggctgcc gaccggcgcc cgcgtgctcg acgtcggagc ggcgccgggc
     1921 ggcaagacgg cgcagctcgc caaggccggc tacgaggtca ccgcgctcga gcgcgacccg
     1981 gcgcggatcg agcggctcag ggccaatctc ggccggctcg gctacgtcgc ggccattgtc
     2041 acggcggacg cgctcgacta tgtgcccgag cacggtttcg acggggtgct gctcgatgcg
     2101 ccgtgctcgg cgacgggaat cttccggcga cacccggagg tggtctggca ccgggacgcg
     2161 gccgatatcg cggggcgcgt ggcagtgcag cggcagctca tcgggcgtgc cacaatctgc
     2221 ctcaatcccg gcggagtgct gctctattgc gtctgctcgc tgcagccgga agagggcgaa
     2281 agccaggcgg agtgggcgct ttcgcagggc ctcgaaccct ggccgatcac tgccgcggag
     2341 ctcggctggg cggtgccggt caccgcggcc ggattcgtcc gtacccatcc ggggcagacg
     2401 gttccggggg aaaagggcgg aacgctcgac gggttcttcg ttgcgcgctt ccggcgccgc
     2461 tgaatattaa ggttttccgg gcagggtccg aagcgcgccg ctggcgccgc ctggggtgtg
     2521 agagggctgg ttggcaaatc cgttagcgtt ccttgcgcgt cgcagcgcaa aacggctggc
     2581 cgatttcgcc gtcagcaatc cgctgatccg ctggagctgg accggcccga gcaccgagga
     2641 ttatgccggg gcgctcagcg aattccgtcc caccgaccgc gaatcgctgc tcgagatgat
     2701 gcaggggcgt tacctgctcg ccagcaagct cgtcgacacc aatggcgtgt ctccgttcgc
     2761 catcgacatg gcgcatgacg actggctgga cgacctgcag gccttcgcct ggctccggca
     2821 tttccgcgat gcgcgcaacg acgaggagcg gggttttgcc cgcagcctgg cgctcgactg
     2881 gatccagcgc gacggccagt tcgaccgcac cgtctggggg ctgtcgctga cggcgcggcg
     2941 ggtgctcaac tggctgaggc atttcaacat ccttgccgac gggggcaatc cggcggacgt
     3001 ggcggtgatc gcgcgggcgc tcggcacgca gatccagtcg ctgaagctga gggcgctgtt
     3061 cgccgacgat ccggtcgaca gcctgatggc ggcgctggcg ctgctggggg tcgcgctgtg
     3121 cgaccaggac cgggagtccg agatcggccc gcggctcgag cgggtgaaca ccctgctcga
     3181 ccggcagatc gacgaagacg ggctgcatcg ctcgcgctcg gccaaggtgc agctgatgct
     3241 gatggtcgag ctgacgacat tgcggcaggc gctgctgcgg cagtcggacg cctaccacaa
     3301 cgagctcaac gaaatgctcg acgcgatgca tcgcggcctc gacgccattt cgctcggcac
     3361 gggcgaggcg gcgtatttca acggcaccgg gcagatggcg cacgacatca tcgtcgccgt
     3421 gcaggcgcag agcccgtcgc gggcgcgctc caccggcacg gccggcggct atggcaggct
     3481 gctctcgggc aaatccatcg tcgtcgccga ttccggctac gtgccggcgc ccgaatacgc
     3541 ccgccacatg cacgccagcg cgctggcctt cgagttcagc cacgggcgcg acctggtggt
     3601 gtgcaattgc gggccggcgc cggccgacat ggaagacagc gagctgctgt tccggcaggg
     3661 gatcgcgcat tcgggcccga ccatcaacgc cctgtcggcc gcggcgattc ccccgcgcgg
     3721 accactcgcc caccgggtgg tgcggatcgg ccgcgatccc gacatcgcga ccgacgaggc
     3781 cgaccactcg ctggcgatgc gcacgcacgg ctacgaggag cggttcgggg tggcgctgga
     3841 gcggcggctg acgctgctgg cggaaggcaa ttcgctggtc gggcaggagc ggatgatcaa
     3901 ggcccgcggg cggatgtcgg gcgcctgtgc gtttcgcttc cacctggcgc accagacgca
     3961 ggtggccccg gcgggcgaca tgctcaagct caggctcaat tccggcgcag tgtggaactt
     4021 cctctgggaa ggcgccgaca tgcggatcga ggacagcgtc cggcaatcgg cgtatttcgg
     4081 cttccaccgg accaagcaga tcgtgctcga ggcgctggtg ggggacgtgc aggaagtcag
     4141 ctggatcttc acgctggacg agggctagcg ggcgtccctt cccaaggcgc ggcgtttctg
     4201 caataggtcg cggcgttcgc gcgactggcg agaagagatg ggacaccatc ggggaacgcg
     4261 aacccgaacc gccgctcgcc tgggcaccct tcgaaccccg cgggagcccc atgtccgaac
     4321 ccagcccatc cgccatcgtc cccatccggc gcgccctgct cagcgtcttc gacaagacgg
     4381 gcatggagga tttcgccaag gagctggcgc ggctcggggt cgagctggtg tcgaccggcg
     4441 gcacggccaa gctgat
//
LOCUS       DATAZA010000491         1792 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3093789, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000491 DATAZA010000000
VERSION     DATAZA010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3093789"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..993)
                     /locus_tag="VHZ56_12250"
     CDS             complement(<1..993)
                     /locus_tag="VHZ56_12250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX4298784.1"
                     /translation="MIETDVLVVGSGPAGSSTAALLSSYGVDNILVTKYRWLSDTPRA
                     HITNQRAMEVLRDLGLEQQALLYATPNQLMGNNVFCTSLAGEELGRMRSWGSDPYTQA
                     RHRIASPTTMVDLPQNFLEPILFGAACARGTRARLSSEYVSLAQDESGVTAQVRDRVS
                     GDMYPIRAKYLVGADGGNSQVATDIGLPMEGKMGVGGSINILFKADLSKYVAHRPSVL
                     YWVLQPGSNVGGIGMGLVRMIRPWNEWLIVWGYDITQPPPEVTAEICEQLARQLIGDA
                     EIPIEVTGWSTWTVNHMHATSYQSGRVFCMGDAVHRHPPSNGLGSNTSIQDAFNL"
     gene            complement(990..>1792)
                     /locus_tag="VHZ56_12255"
     CDS             complement(990..>1792)
                     /locus_tag="VHZ56_12255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="intradiol ring-cleavage dioxygenase"
                     /protein_id="HEX4298785.1"
                     /translation="PRLKQILTSLVRHAHDFVRDVELTQDEWLAAIMFLTRTGHLSDD
                     KRQEFILLSDTLGISMLVDAINHRQPAGATETTVLGPFYVQNPPVRPDGADISAGLHG
                     TPLHVTGQVRSAAGQPLAGALVDVWQSDDDGFYDVQKPGDDPQLRARFIADGDGRFSL
                     WTLVPKFYAIPYDGPVGEMLKATKRHPYRPAHIHFMIAHPGYDTLVTHLFVDGDPYLD
                     SDAVFGVKQSLIVDLDDRDGPAPGRPELKQWKGLDHHFGLKPRTGAAK"
BASE COUNT          292 a          600 c          585 g          315 t
ORIGIN      
        1 cagattgaag gcatcctgga tcgacgtgtt ggagccgagc ccattgctcg gcggatgccg
       61 gtgcaccgcg tcgcccatgc agaagacacg gccgctctgg tagctggtgg cgtgcatgtg
      121 attgaccgtc caggtcgacc aaccggtcac ctcgatcggg atctcggcat cgccgatgag
      181 ctgccgcgcc agctgctcgc agatttccgc ggtgacctct ggcggcggct gcgtgatgtc
      241 gtagccccag acgatcagcc actcgttcca cggccggatc atccgcacca ggcccatgcc
      301 gatgccgccc acattgctgc ctggctgcag cacccagtag agcacgctcg gccggtgcgc
      361 gacgtatttg ctgagatcgg ccttgaacag gatgttgatc gagccgccga cccccatctt
      421 gccctccatc ggcaggccga tgtccgtggc aacctgcgaa ttgccgccat cggcgcccac
      481 cagatatttg gcgcggatcg gatacatgtc gcccgacaca cggtcgcgca cctgcgccgt
      541 aaccccgctc tcgtcctgcg cgagcgacac atattcggac gacagccgcg cccgggtgcc
      601 gcgggcgcag gccgccccga acaggatcgg ctcgaggaaa ttctgcggca ggtcgaccat
      661 cgtcgtcggg ctcgcgatcc gatgccgtgc ctgcgtgtag ggatcggagc cccaactgcg
      721 catccggccc agctcttcac cggcgagcga cgtgcaaaag acgttgttgc ccatcagctg
      781 gttcggcgtc gcatagagca acgcctgctg ctcgagcccg aggtcgcgca gcacctccat
      841 cgcccgctgg ttggtgatgt gggcgcgcgg cgtgtcggag agccagcggt atttggtgac
      901 gaggatgttg tcgacgccgt agctcgacag cagcgccgcc gtactcgacc cagccggccc
      961 gctgccgacg acgaggacat cggtttcgat catttagcgg ctcccgtgcg cggcttcagt
     1021 ccgaaatggt ggtcgagacc cttccattgc ttgagctcgg gccgccccgg cgccggcccg
     1081 tcgcgatcgt cgagatcgac gatcagcgat tgcttgaccc cgaacaccgc gtcgctgtcg
     1141 aggtagggat cgccgtcgac gaagagatgc gtgaccagcg tgtcgtagcc cggatgcgcg
     1201 atcatgaagt ggatgtgcgc cggccggtag ggatgccgct tcgtcgcctt cagcatctcg
     1261 cccaccggtc cgtcataggg gatcgcatag aatttcggca ccagcgtcca cagcgagaag
     1321 cggccgtcgc catcggcgat gaaacgggcc cgcagctgcg ggtcgtcgcc cggcttctgc
     1381 acgtcgtaga acccgtcatc gtcggattgc cagacatcga ccagcgcgcc ggcgagcggc
     1441 tgtcccgcgg cagacctgac ctgcccggtc acgtggagcg gcgttccatg caggccggcc
     1501 gagatgtcgg cgccatccgg cctgaccggt ggattctgca cgtagaacgg cccgagcacc
     1561 gtcgtctccg tggcgccggc cggctgccgg tggttgatgg cgtcgaccag catcgagatg
     1621 cccagcgtgt ccgacagcag gatgaattcc tgccgcttgt cgtccgacaa gtgcccggta
     1681 cgggtgagga acatgatcgc tgccagccat tcgtcctgcg tcagctcgac gtcgcggacg
     1741 aaatcatggg cgtgccgcac gaggctcgtg aggatctgct tcagccgcgg gt
//
LOCUS       DATAZA010000492         1655 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3325886, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000492 DATAZA010000000
VERSION     DATAZA010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3325886"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..699
                     /locus_tag="VHZ56_12260"
     CDS             <1..699
                     /locus_tag="VHZ56_12260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HEX4298786.1"
                     /translation="VRGVSRAERDSRLKRVADIVGLSQLLDRKPAQLSGGQRQRVALG
                     RAIIAEARLCLMDEPLSNLDAKLRHEMRTEIRALQQRLGMTMVYVTHDQTEAMTMADR
                     VILMRDGRIEQNGPPEQLYSRPATAFTARFIGTPPMNLIVREGILVGIRPEHIHIVSQ
                     DGRPARVKSAEHLGADSIVLCEFEGQPVSVRQDGFSKAAPGDEIRLAWTAGDEHQFDQ
                     ATGARLAPQQRRST"
     gene            696..>1655
                     /locus_tag="VHZ56_12265"
     CDS             696..>1655
                     /locus_tag="VHZ56_12265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4298787.1"
                     /translation="MKGFGRTILGGALAALLLSAHPAAAVDLTMYYPVAVGGPVTKII
                     DDMVGRFEKQNPDIKVTAVYAGNYTDTMTKAMTAMKGGQPPQLSVLLSTDVFTLMDEN
                     AIVPFDGLVADKAWFKEFYPAFMANGQIDGKTWSIPFQRSTIVLYWNKDAFKDAGLDP
                     EKAPASWDEMIAMGKKLVKKDGSGNITRWGVEIPTTGYAYWMLQALAIENKQKLMNEA
                     GTEVHLTAPKTVAALDYWVDLSRKETVMPTGSIDWATLRSDFLEGKTAMMWHTTGNLT
                     AVKEGAKFNFGVAILPAKEQRGSPTGGGSFYVFKSATPEQQKAA"
BASE COUNT          323 a          529 c          549 g          254 t
ORIGIN      
        1 gtgcgcgggg tctcccgggc cgagcgggat tcgcggctca agcgagtcgc cgatatcgtt
       61 ggtctttcgc aactgctgga ccgcaagccg gcgcaattgt ccggcggcca gcgccagcgg
      121 gtcgcgctcg gccgcgccat tatcgccgag gccaggctgt gcctgatgga cgagccgctg
      181 tccaacctcg acgccaagct gcgccacgag atgcgcaccg agattcgcgc gctgcagcag
      241 cgcctcggca tgacgatggt ctatgtcacc cacgaccaga ccgaggccat gacaatggcc
      301 gaccgcgtca tcctgatgcg cgacggccgc atcgagcaga acgggccacc cgagcagctc
      361 tacagccgtc ccgcgaccgc cttcaccgca cgctttatcg gcaccccgcc gatgaatctg
      421 atcgtgcgcg agggcatcct ggtcgggatc cggcccgaac atatccacat cgtgtcgcag
      481 gacggtcgtc cggcccgggt aaagagcgcc gagcacctcg gcgccgacag catcgtgctg
      541 tgcgagtttg agggccaacc ggtctcggtg cggcaggacg gcttcagcaa ggccgcgccg
      601 ggcgacgaga tcaggctggc ctggacggcc ggcgacgaac atcaattcga tcaagcgacg
      661 ggcgcccggc tggcgccgca acagaggagg tcaacgtgaa gggttttggg cgaacgattt
      721 tgggcggggc gcttgccgcg ctgctgttgt cggcgcatcc ggcggcggct gtcgatctca
      781 cgatgtatta cccggtcgcg gtcggcggac ccgtgaccaa gatcatcgac gacatggtcg
      841 gccgtttcga gaagcagaat cccgacatca aggtgacggc ggtctatgcc ggcaactaca
      901 ccgacaccat gacgaaagcg atgaccgcga tgaagggcgg ccagccgccg caattgtcgg
      961 tgctgctctc caccgacgtc ttcacgctga tggacgagaa cgccatcgtg ccgttcgacg
     1021 gcctggtcgc cgacaaggcc tggttcaagg agttctatcc ggcgttcatg gcgaacggtc
     1081 agatcgacgg caagacctgg agcatcccgt tccagcgttc gaccatcgtg ctgtactgga
     1141 acaaggatgc cttcaaggat gccggccttg atcccgagaa ggcgcccgcg agctgggacg
     1201 agatgattgc gatgggcaag aagctcgtca agaaggacgg ctcgggcaat atcacgcgct
     1261 ggggcgtcga gatcccgacc accggctacg cctactggat gctgcaggcg ctggcgatcg
     1321 agaacaagca gaagctgatg aacgaggccg gcaccgaagt tcatctcacc gcgccaaaga
     1381 ccgtcgcggc gctggactac tgggtcgatc tgtcgcgcaa ggaaaccgtg atgccgaccg
     1441 gcagcatcga ctgggcgacg ctgcgcagcg acttcctcga gggcaagacc gcgatgatgt
     1501 ggcacaccac ggggaacctg accgcggtga aggaaggcgc caagttcaat ttcggcgtcg
     1561 ccatcctgcc cgcaaaggag cagcgcggct cgccgaccgg cggcggcagc ttctacgtct
     1621 tcaagagcgc cacgccggag cagcaaaagg ccgcg
//
LOCUS       DATAZA010000493         2094 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2976212, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000493 DATAZA010000000
VERSION     DATAZA010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2094
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2976212"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..225)
                     /locus_tag="VHZ56_12270"
     CDS             complement(<1..225)
                     /locus_tag="VHZ56_12270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020508647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX4298788.1"
                     /translation="MTIAPPERRAKPDDFSGHFTRKQLLGVVALISAMTVMRLVYASL
                     IDLRTDEAYYWTWSKESVLSFLDHPPMIAWF"
     gene            364..>2094
                     /locus_tag="VHZ56_12275"
     CDS             364..>2094
                     /locus_tag="VHZ56_12275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX4298789.1"
                     /translation="MTAPARAQFARFVRSLSVRQIRFACGLVLYAYLISHFLNHALGN
                     ISMEALATGVHYHTLLWQFPPVAAVFYASTLIHSGLGIWALYQRREFHWRAIEPLQLV
                     LGLSIPALIITHIVGVRLGQSLFGHQKLYPQELYSFWVAHPTRIWSMSAVLIIAWIHG
                     SIGLYFWLRMKAFFKRAAPFLLAAAVLVPTLALLGFYQAGREVAAISASPQWQAENIS
                     PQQVGTPAQQQTLDDITNDLLNGYLALIVLVLLAKGLRALNERRVGMISLSYGNGRNV
                     RVPKGLSVLEASLRHNVPHASVCGGRARCSTCRIRVIGDCSALPEPSKREAFVLNRVG
                     ADDPSIRLACQLRPTEDLSFFQLFMPHMMTANAHASHPQRIGQERYLVSMFVDMRGST
                     RLAEHRLPFDTVFIVNRFLGAVSQAVIECGGQPNQFVGDGELALFGLRTSPQVACRQA
                     LKAAAMIAANIAELNQFLSHDLHEPIRFGLGIHSGEVIIGDIGYRDHMVFTALGDAVN
                     VAARLQDMTKTLGCEAIFSEEVRITAGLAVDSLPEQEVTIRGRSNPMTVRTVIDAKTL
                     SVLIDDLAVVA"
BASE COUNT          362 a          683 c          645 g          404 t
ORIGIN      
        1 gaaccacgcg atcattggcg gatgatcgag gaacgaaagc acgctctcct tggaccaggt
       61 ccagtaatag gcctcgtcgg tgcgcagatc gatcaagctc gcatagacca gccgcatcac
      121 cgtcatcgcc gagatcagcg cgaccacgcc cagtaattgc ttacgggtga aatggccgga
      181 aaaatcgtcc ggcttggcgc ggcgctcggg cggggcaatc gtcatggcgc cttctcacct
      241 gctccggaag gggtgtcaac gtgcggcgcg ggagcggggt caggggcgcc gggacggcgg
      301 cagaacgatg gtcaccggct gcattaaact ctaacattgc cggcgtatat ctcacggaat
      361 cagatgaccg cacccgcccg cgcccagttc gcaagattcg tccgcagcct cagcgtccgg
      421 cagatccgat tcgcctgcgg gctggtgctg tacgcctatc tgatcagcca tttcctcaac
      481 catgcgctcg gtaacatctc gatggaggcg ctggccacgg gcgtgcatta ccacacgctg
      541 ctctggcagt ttccaccggt cgcggcggtg ttctatgcct cgacgctgat tcactccgga
      601 ctcggaatct gggcgctcta ccagcgccgg gaatttcact ggcgggcgat cgagccgctg
      661 cagctcgtgc tgggcttgag cattcccgcg ctgatcatca cccatatcgt cggcgtgcgg
      721 ctcggccagt cgctgttcgg gcatcagaag ctgtatccgc aggagctgta ttcgttctgg
      781 gtcgctcatc ctacccggat ctggtcgatg tccgcggtgc tgatcatcgc ctggatccac
      841 ggcagcatcg gactgtattt ctggctgcgg atgaaggcgt tcttcaagcg tgcggcaccg
      901 tttctgctgg cggccgcagt gctggtgccg accctggcgc tgctcggctt ttatcaggcc
      961 ggacgtgagg tcgccgcgat cagcgccagc ccgcaatggc aggccgagaa catctcgccg
     1021 caacaggtcg gtactccggc ccagcaacaa acgctggatg acatcaccaa tgatttgctc
     1081 aacggctatc ttgctctgat cgtactggtg ctactggcca agggcctgcg cgccctcaat
     1141 gaacgccgcg tcggcatgat cagcctgtcc tacggcaacg gccgtaacgt ccgggtgccg
     1201 aagggcctca gcgtgctgga agccagcctg cgccacaacg tccctcacgc cagcgtgtgc
     1261 ggcggccgcg cccgctgctc cacctgccgt atccgcgtga tcggcgattg cagcgcgttg
     1321 ccggaaccgt cgaagcgcga ggccttcgtg ctcaatcggg tgggcgcgga cgacccgtcg
     1381 atccggctcg cctgccagtt gcgtcccacc gaggatttgt ccttcttcca gctcttcatg
     1441 ccgcacatga tgacggcgaa cgcgcatgcg tcgcatccgc aacggatcgg ccaggagcgc
     1501 tatctggtaa gcatgttcgt cgacatgcgc ggctcgacca ggctcgccga acatcgattg
     1561 ccgttcgaca cggtcttcat cgtcaatcgc ttcctcggcg cggtgtcgca agcggtgatc
     1621 gagtgcggcg gccagcccaa ccagttcgtc ggcgacggtg aactggcctt gttcgggctg
     1681 cgcaccagtc cgcaggtcgc atgccgccag gcgctgaaag cggcggccat gatcgccgcc
     1741 aatatcgccg agctcaatca attcctcagt cacgacctgc atgagccgat ccgctttggc
     1801 ctcggcattc acagcggcga ggtcatcatc ggcgacatcg gctaccgtga tcacatggtg
     1861 ttcaccgcgc tcggcgatgc cgtcaatgtc gccgcacggc tacaggacat gaccaagacg
     1921 ctcggctgcg aagcgatctt ttccgaggag gttcgcatca ctgccggcct tgcggttgac
     1981 agcctgcccg agcaggaagt gacgatccgc ggccgctcca acccgatgac ggttcgcacc
     2041 gtgatcgacg cgaagacgct gtcggtgctg atcgacgatc tggccgtggt cgcg
//
LOCUS       DATAZA010000494         3069 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2743490, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000494 DATAZA010000000
VERSION     DATAZA010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3069
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2743490"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..494)
                     /locus_tag="VHZ56_12280"
     CDS             complement(<1..494)
                     /locus_tag="VHZ56_12280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298790.1"
                     /translation="MLALLALLAGCARPTGDFGRVEPDPLHDEAMPVAGDFLAGKTGR
                     PVSAFNLTDQERDMRNRIWRYLVDQHVYEWFGPTVTELQRTSILPLDARPLATDRYYQ
                     WLHRQSFASSRVRYAKLSDDAELDTELIAPTFASICAVLDVDRQRGIAADATPGLEES
                     MKANA"
     gene            complement(523..765)
                     /locus_tag="VHZ56_12285"
     CDS             complement(523..765)
                     /locus_tag="VHZ56_12285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298791.1"
                     /translation="MKTIGDKRRPDLEAPAVERRRDTLGKLVQFENRRKSRSVGLPDR
                     SGSADILIFTGVRYERDTSSAPTKPTATPRTKRKRV"
     gene            859..2007
                     /locus_tag="VHZ56_12290"
     CDS             859..2007
                     /locus_tag="VHZ56_12290"
                     /inference="COORDINATES: protein motif:HMM:NF021603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2336 domain-containing protein"
                     /protein_id="HEX4298792.1"
                     /translation="MLGFQPYETFQQLIETGGIDRTNTLLIAACDAYTRRGRATLAET
                     EQFVTLASRLFPQAAPSARAKAAAALGRSESLSPALEELVVANIGDDLADFLVNAPRL
                     SEASMLKIINTNDVPSAAAIGRRNDLTNVVLAKLFQMNSRKVYRALATNTTIAPRGPY
                     LAALARSAQMDHQVAWSLAARDDFDAALLAPAFFDLNESDRIKVIKAFAMRATPPAPI
                     KRTLEQLSVATDELTRALMKLFAENRRPEVTRLLHQITGLDEVRCGQIAHDTSGAALF
                     VVLRAFGCSAFDGLKVLIHATSHDEDRSKSLSTFSKLFEAVSVDATAFLMSAWRGEVN
                     LLDLGKPEYRPFADTRRSAAAAAAQQPNPVVDRTIEALARIGIVKQAS"
     gene            complement(2004..2339)
                     /locus_tag="VHZ56_12295"
     CDS             complement(2004..2339)
                     /locus_tag="VHZ56_12295"
                     /inference="COORDINATES: protein motif:HMM:NF019019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1491 family protein"
                     /protein_id="HEX4298793.1"
                     /translation="MFRSDLWTSAFVRRHNLIGHICVVSRRGDPIAGQIFIEIDHLNG
                     TVSLLTPAPSIARLEGDEDRLFVRRFDHVDAATVRDRIAREAGFDPDLWVLSLEMRGD
                     DPGVTMARV"
     gene            complement(2348..>3069)
                     /locus_tag="VHZ56_12300"
     CDS             complement(2348..>3069)
                     /locus_tag="VHZ56_12300"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HEX4298794.1"
                     /translation="DGLFGAHTIRAIKAFEQKAGLPARGQLTPALLAMLVSAPVPAGD
                     APALLPAPRLAPAQPATNGADTLPPPPLAAAATDLVKPLPAPAPLTSTSTLSSVEPPP
                     VATPLAAVAAATGTELIPPSSTQTLAMNEPALVARRPVQTIAVHVSTPAPGADAQPIP
                     SPLAPATEGTDDASTNPGVVAEVQRGLSSLGFLHGEADGVASEATSKAIRNFEVYYNY
                     DVTGRVSRELVDLLVQAGAII"
BASE COUNT          518 a          986 c         1071 g          494 t
ORIGIN      
        1 gcattcgcct tcatcgactc ttcgagccca ggcgtcgcat ccgctgcgat accgcgctgc
       61 cgatcgacgt cgagcacggc acagatcgag gcaaaggtcg gggcgatgag ttccgtatcg
      121 agttcggcat catcggacaa ctttgcgtag cgcacacgcg aagaggcaaa gctctgccga
      181 tgcagccatt ggtagtagcg gtcggtcgcc agcggtcgcg catcgagggg cagaatgctc
      241 gtgcgctgca actccgtgac cgttgggccg aaccactcgt agacgtgctg atcgacgagg
      301 tagcgccaga tgcgatttcg catgtcgcgt tcctggtcgg tgaggttgaa ggccgaaacc
      361 ggccggccgg tcttgccggc aaggaagtcg cccgcgaccg gcatcgcctc atcgtgcagg
      421 gggtcgggct cgacgcggcc gaagtccccg gtcggccgcg cgcacccggc aagcagcgcc
      481 agcagcgcca gcatggcaaa gggcgcgcac cgccgcgtaa ggtcagacac gcttgcgctt
      541 ggtccgtggc gtcgctgtgg gtttggtcgg agcggacgag gtgtcgcgct cgtagcgcac
      601 gccggtgaag atcaatatgt cggcgctgcc cgagcgatca ggcaggccga cgctgcggct
      661 tttccgtcgg ttctcgaact gcacgagctt gcccaaagtg tctctccgcc gctcgacggc
      721 cggtgcctcc aaatcggggc gacgcttgtc cccaatggtt ttcattaaga gatcgtcaag
      781 gttaacagtc tgctaacgaa ttgctggaaa tagtcaggca tcggcactcc cgggattccc
      841 ggccacacca ggcgacagat gctcggcttc cagccctacg agaccttcca gcaactgatc
      901 gagaccggcg ggatcgatcg caccaatacg ctgctgattg cggcgtgcga cgcctacacg
      961 cgccgcggtc gcgcgacgct cgccgagacc gagcagtttg ttaccctcgc ctcgcgcctg
     1021 tttccgcagg cagcgccatc ggcccgggca aaagcggcgg ccgcgcttgg ccggtcggag
     1081 agcctgtcgc cggcgctcga agagctggtc gtcgccaata tcggggatga cctcgccgat
     1141 ttcctggtga acgcgccgcg gctgtcggaa gccagcatgc tgaagatcat caatacgaac
     1201 gatgttccaa gcgccgctgc gatcggtcgc cgcaacgacc tcaccaacgt ggtgctggcc
     1261 aagctgttcc agatgaacag tcgcaaggtc taccgggcgc tggcgaccaa caccacgatc
     1321 gcgccgcgcg gcccctacct tgcggccctg gcgcgctcgg cacagatgga tcaccaggtc
     1381 gcgtggtcgc ttgcggcgcg cgacgatttc gacgctgcgc tgctcgcccc cgccttcttc
     1441 gatctcaacg agagcgaccg gatcaaggtg atcaaggcgt tcgcgatgcg cgccacgccg
     1501 ccggcgccga tcaagcggac actcgagcag ctgtcggtcg cgacggacga gctgacgcgg
     1561 gcgctgatga agctgtttgc cgagaatcgc cggccggaag tgacgcggct gctgcaccag
     1621 atcaccgggc tcgacgaagt acgctgcggg cagatcgcgc acgacacgag cggcgcggcg
     1681 ctgttcgtgg tgctgcgggc ctttggctgc tcggcgttcg acggcctgaa ggtgctgatc
     1741 cacgcgactt cgcatgacga ggatcgctcg aagtcgctgt cgaccttctc caagctgttc
     1801 gaggcggtga gcgtcgacgc cactgccttc ctgatgagcg cctggcgcgg cgaggtgaac
     1861 ctgctcgacc tgggcaagcc ggagtaccgg ccatttgccg acacccgccg gtcggcggcc
     1921 gccgccgcgg cgcagcagcc caatccggtg gtcgaccgta ccatcgaggc actggcccgc
     1981 atcggcatcg tcaagcaggc cagctagacg cgggccatcg tcacgcccgg gtcgtcacca
     2041 cgcatctcga gggagagcac ccacaggtcg ggatcgaacc cggcctcgcg ggcgatgcgg
     2101 tcgcggaccg ttgcggcatc gacgtgatcg aagcggcgga cgaacaggcg gtcctcatca
     2161 ccctccagcc gggcgatgga gggcgcggga gtcagcaggc tgacggtgcc gttgagatgg
     2221 tcgatctcga tgaagatctg gccggcgatg gggtcgccgc ggcgcgatac gacgcagatg
     2281 tggccaatca gattgtgtcg ccggacgaag gccgacgtcc agaggtcgga gcggaacatc
     2341 aggccgctta gatgatcgct ccggcctgca caagcagatc gacgagttcc ctggagacgc
     2401 ggccggtcac gtcataattg tagtagacct cgaaattgcg gatcgccttg gaggtcgcct
     2461 cgctggcaac gccgtcggcc tcgccatgga ggaagccgag gctcgagagg ccacgctgca
     2521 cctcagccac cacgcccggg ttggtcgagg cgtcgtctgt cccctcggtc gcgggagcga
     2581 gcggcgacgg gatcggctgg gcatcggcac ccggggccgg cgtcgaaacg tggacggcga
     2641 tcgtctgcac cgggcgcctg gccaccagcg ccggctcgtt catcgccagt gtctgcgtcg
     2701 atgacggtgg aattagctcg gtgccggtcg cggcggcaac agcggccagt ggcgtcgcga
     2761 ccggtggcgg ttctacgctc gagagcgtcg atgtgctggt gagcggagcc ggcgccggca
     2821 ggggcttgac caggtcggtg gccgcagcgg caagcggtgg cggcggcaag gtgtcggcac
     2881 cgttcgtcgc gggttgcgca ggcgcgaggc gcggcgcggg caacagggcg ggcgcatcgc
     2941 cggccggaac cggtgctgag acaagcatgg ccagcagcgc cggggtgagt tgcccccggg
     3001 ctggaagtcc tgccttctgc tcgaacgcct tgatggcgcg aatggtgtgc gcgccgaaaa
     3061 gaccgtcgg
//
LOCUS       DATAZA010000495         2367 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4020847, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000495 DATAZA010000000
VERSION     DATAZA010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2367
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4020847"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..997)
                     /locus_tag="VHZ56_12305"
     CDS             complement(<1..997)
                     /locus_tag="VHZ56_12305"
                     /inference="COORDINATES: protein motif:HMM:NF025014.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein N-terminal
                     domain-containing protein"
                     /protein_id="HEX4298795.1"
                     /translation="MINASHEFRARFRMPHALRLAALVAALCAATASALAADPTYLKV
                     SSGSAGVTQPVLLDVNKSMIVDLPTNVGEVIASAPAIATVVMRSKTRAIVQGLAGGDT
                     NIFFLDPAGNNISTLDVKVVQPRSDVGNALEQAIGRNIPGSRVHVESVLLDGSTNRVV
                     LSGTTLSQDDADKAVAIAVQFAGDPKNVASIISVSGDQQVILKVTVAEVDRTVIKQLG
                     INLDVTGGGLITGLVNSPSDQLGSVSGAAGAGEITASANIGGVQINATLDALARRNAL
                     RTLAEPVLTARSGQPASFLVGGEFPYTTSDGNGHVVTAFKQYGVSLNFTPTVKSDG"
     gene            complement(1015..1947)
                     /gene="cpaB"
                     /locus_tag="VHZ56_12310"
     CDS             complement(1015..1947)
                     /gene="cpaB"
                     /locus_tag="VHZ56_12310"
                     /inference="COORDINATES: protein motif:HMM:TIGR03177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HEX4298796.1"
                     /translation="MRVSRILLLVVALVAGGLAAFLATRGGGQPEAPAPQVAQDNHTQ
                     VLVAKADIGVGERLSDQDVGWQDWPESGVQSGYITQSATPQAISDMKGAVARFEIFPG
                     EPIQQAKLVRSDQGYLSAVLDKGMRGVSISVDASSASGGFIVPNDHVDVILTHADASG
                     SQTSETILSNVRVLAVNTRLGETGKTGAPDDPNDPKAEIFANTAIATLELDPSQAETV
                     VNAAQLGKLALSLRSIVDFTPAPGDNTNIRRNAPIRIIRYGLEANVQSGAVPASDSDT
                     DGVGGLAQPPVSVTVAPASPIPTPAPAVVTQSPS"
     gene            complement(2083..>2367)
                     /locus_tag="VHZ56_12315"
     CDS             complement(2083..>2367)
                     /locus_tag="VHZ56_12315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HEX4298797.1"
                     /translation="GWIGGGDAKLVAATTLWVGFSLMLPYLIYAALLGGGLTLLILVL
                     RRYPLPNFLQRHKWIDRLHDPKSGVPYGITLAIAALLVYPETAIFQHFVG"
BASE COUNT          380 a          718 c          878 g          391 t
ORIGIN      
        1 tgccgtccga tttgaccgtc ggcgtgaagt tgagcgacac gccatactgc ttgaaggcgg
       61 tgaccacgtg gccgttgccg tccgaagtgg tgtaggggaa ttcgccaccg acgaggaacg
      121 aggccggctg cccggacctc gcggtcagta ccggctcggc cagggtgcgc agggcattgc
      181 ggcgggccag cgcgtcgagc gtggcattga tctgcacgcc gccaatgttg gccgacgccg
      241 tgatctcgcc ggcgcccgcg gcgcccgaca ccgagccgag ctggtcgctg ggcgagttga
      301 cgagcccggt gatcagaccg ccgccggtca cgtcgaggtt gatgccgagt tgcttgatca
      361 ccgtgcggtc gacttccgcg acggtcacct tgaggatcac ctgctggtcg cccgagaccg
      421 agatgatcga ggcgacgttc ttggggtcgc cggcgaattg cactgcgatt gcgaccgcct
      481 tgtcggcgtc gtcctgggac aacgtggtgc ccgagagcac gacgcggttg gtgctgccgt
      541 cgagcagcac ggattcgacg tggacgcgcg agccggggat gttgcggccg atcgcctgtt
      601 cgagggcgtt gccgacgtcg gagcgcggct gcacgacctt gacgtcgagc gtcgagatat
      661 tgttgcccgc cggatcgaga aagaaaatgt tggtgtcgcc accggcgagg ccctggacga
      721 tggcgcgggt cttggagcgc atgacgaccg tggcgatcgc cggggcgctg gcgatcacct
      781 cgccgacatt ggtcggcaga tcgacgatca tcgacttgtt gacgtcgagc aggaccggct
      841 gggtgacgcc tgccgatccg ctggagacct tgaggtaggt cggatcggcg gcaagggcgg
      901 aagccgtggc ggcgcacagt gcggccacca gcgcggccaa cctgagggca tggggcatgc
      961 ggaacctcgc gcggaactcg tgggatgcgt tgatcatggg tctggtccgg tccatcagct
     1021 cggcgactgg gtgacgacgg ccggggccgg ggtggggatc ggcgaggccg gcgcgacggt
     1081 gacgctgacc ggcggctggg cgagcccgcc gacgccgtcg gtgtcgctgt cggaggccgg
     1141 cacggcgccg ctctggacgt tcgcctcgag gccgtagcgg atgatgcgga tcggcgcgtt
     1201 acgccggatg ttggtgttgt cgcccggcgc cggggtgaaa tcgacgatcg agcgcagcga
     1261 cagcgccagc ttgcccagct gtgcggcgtt gaccacggtc tcggcctgcg agggatcgag
     1321 ctcgagcgtg gcgatcgcgg tattggcgaa gatttcggcc ttcggatcgt tcggatcgtc
     1381 gggcgcgccg gtcttgccgg tctcgccgag ccgggtgttg accgccagca cgcggacgtt
     1441 ggagaggatg gtctcggagg tctggctgcc gctcgcatcg gcgtgcgtga ggatcacgtc
     1501 gacgtggtcg ttggggacga tgaagccgcc cgaagccgac gatgcgtcga ccgagatgga
     1561 cacgccgcgc atgcccttgt cgaggacggc ggacagatag ccctggtcgg aacgaaccag
     1621 cttggcctgc tggatcggtt cgcccgggaa gatttcgaag cgggcgacgg cacccttcat
     1681 gtcactgatc gcctggggcg tcgccgactg ggttatgtag cccgactgca cgccgctctc
     1741 gggccagtcc tgccagccga cgtcctggtc ggacagccgc tcgccgacgc cgatgtcggc
     1801 cttggcgacg agcacctggg tgtggttgtc ctgggcgacc tgcggcgccg gcgcctccgg
     1861 ctggccaccg ccgcgagtcg cgaggaatgc ggcaaggccg ccggcgacca gcgcaacgac
     1921 caggagcagg attcgcgaga ctctcatcgg caggctccac tcaactcaaa accgcatgcg
     1981 cccagaacgg gtggcccata gtgcggggca aagggtcaaa acttggttaa ccgatgcttt
     2041 gcatttacgg ttaaccgaac cttgttccag tggcggccgc gatcagccga cgaaatgctg
     2101 gaaaatggcg gtctcggggt agaccagcag ggcggcgatg gcgagggtga tgccgtaggg
     2161 cacgccggat tttgggtcgt gcagccgatc gatccatttg tgccgctgca ggaagttggg
     2221 cagcggatag cggcgaagca ccaggatcag cagcgtcagg ccgccaccca gcaacgccgc
     2281 gtagatcagg tagggcagca tcagcgaaaa gccgacccag agcgtcgtgg ctgccaccag
     2341 cttggcgtcg ccgccgccga tccagcc
//
LOCUS       DATAZA010000496         2825 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2860480, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000496 DATAZA010000000
VERSION     DATAZA010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2825
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2860480"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..733
                     /locus_tag="VHZ56_12320"
     CDS             <1..733
                     /locus_tag="VHZ56_12320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298798.1"
                     /translation="VVATTPPPVNTATALLAAGTLAAVSLGGVAAPADGAVTLAASSM
                     IAAGPETLAELGASDIALAPGSLAAVGTTPSMPPIAVATVAAPAGHLDADVALAPAAT
                     GAAVDLAFAGDVAAAVPAGPGQPAAPADLASSGTALVTGALGGTPVDTAAITLTAALE
                     QPAPPPPEPPLLVSAPSVPPDPPTDAAIDDPPVVPDPPAGDPPLLIHAPPRPPLRYNR
                     RYPDILVAPLPSNGRSSSIVTLQLH"
     gene            784..1119
                     /locus_tag="VHZ56_12325"
     CDS             784..1119
                     /locus_tag="VHZ56_12325"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX4298799.1"
                     /translation="MNKMQDDEFADVMRALGHPVRLSILRILAERAQHDCCCTDVTDC
                     LPLAQSTVSQHIKVLLDAGLVERSPKGTRNCYSLNADRLASLNGAFAGLFSGLTADLA
                     PLRTEAEPA"
     gene            1119..>2825
                     /locus_tag="VHZ56_12330"
     CDS             1119..>2825
                     /locus_tag="VHZ56_12330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEX4298800.1"
                     /translation="MPSSPPGKKPATLTAEGSLLSTVRNLWPYMWPKDRADLKLRVVL
                     AIGALLVSKVATTLVPFAYKGIIDGLGKAAQGHEALVMGIAVPVLLVVAYGIGNVVDA
                     GFQQLRDILFASVGQHAVRKLARQTFEHVHRLSLRFHLARRTGGLSRVIERGVTGIEN
                     IIRFTMLNTAPTIVEFIVVGTVFLTLFGIDYVGVLVVTIALYVWFTVVASNWRIGIRR
                     DMNTADTDANSKAIDSLLNFETVKYFGNEAMESERFDLSRAKYERAAVRIWTSLGFLN
                     FGQAVIFYAGTVVIGVMSVMGVLAGKITIGDFVLLNTFLMQIYRPLNFIGMVYREIRQ
                     GLTDIEEMFKLLDQDPEIIDKPGAAPLAITGAVIRFEDVHFHYDPDREILKGISFEVP
                     AGKTTAIVGPTGAGKSTMSRLLYRFYDVTGGRITIDGQDLRDITQASLRAAIGMVPQD
                     TVLFNDTIAYNIQYGRPDAPMSELEAAADHAQIGRFIAALPKGYDTPVGERGLKLSGG
                     EKQRVAIARTILKGPPILILDEATSALDTKTEQDIKSALDAVSRNRTTLVIAHRLSTV
                     INA"
BASE COUNT          431 a         1121 c          821 g          452 t
ORIGIN      
        1 ggtcgtggcg acgacgcccc cgcccgtcaa tacggcgacc gccctgctgg cagcgggaac
       61 gctggccgcc gtttcgctcg gaggagtggc tgcacccgcc gacggcgcgg tcaccctcgc
      121 ggcctcgtcg atgatcgccg cgggcccgga gaccttggct gagctcggcg ccagcgacat
      181 cgcactggcg ccgggcagcc ttgccgcagt cggcacgacc ccatccatgc cccccatcgc
      241 cgtcgccacc gtcgccgcgc cggccggcca cctcgacgca gatgtcgcgc tcgcccccgc
      301 cgcgaccggt gccgccgtcg atctggcgtt tgccggtgat gtcgccgccg ccgtgcccgc
      361 cgggccaggc cagcccgccg cgccggccga tctcgccagc tccggcacgg ccctcgtcac
      421 cggcgccctc ggcggcaccc ccgtcgatac cgccgcgatc acgcttaccg ccgccctcga
      481 gcagcccgcg ccgccgccgc cggagccgcc gctgctcgtc tcggcgccat ccgtcccgcc
      541 ggacccgccc accgacgccg ccatcgacga tcctcccgtg gtgcccgatc ctcccgcagg
      601 cgatccgccg ctcctgatcc acgccccgcc gcggccgccg ctccgctaca accgccgcta
      661 tcccgacatt ctcgtcgccc cgctcccctc caacggccgc agttcgtcca tcgtgacact
      721 gcagcttcac tgacccaatc cggccttgca ccggacgtgg cgttcttcta tcggtacttg
      781 gcgatgaaca agatgcagga cgacgagttc gccgatgtga tgcgcgcgct gggccacccg
      841 gtgcgcctca gcatcctgcg catcctcgcc gaacgggccc agcacgattg ctgctgcacc
      901 gacgtcaccg actgcctgcc gctggcccag tccaccgtca gccagcacat caaggtgctg
      961 ctcgatgccg gcctcgtcga gcgcagcccg aagggcaccc gcaactgcta ttcgctgaat
     1021 gccgaccggc tggcgtcgct caacggcgct ttcgccggcc tgttctccgg tctcaccgcc
     1081 gacctcgcgc cattgcgcac cgaggctgag cccgcctgat gccgtcctct ccccccggca
     1141 agaagcccgc gacgctgacc gcggagggct cgctgctctc gaccgtccgc aacctctggc
     1201 cctacatgtg gccgaaggac cgcgccgacc tgaagctgcg cgtcgtcctc gccattggcg
     1261 cgctgctcgt cagcaaggtc gccaccacgc tcgtgccctt cgcctacaag ggcatcatcg
     1321 atggcctcgg caaggcggcg cagggccacg aggcgctggt gatgggcatc gccgtgcccg
     1381 tgctgctcgt cgtcgcctac ggcatcggca acgtcgtcga cgccggcttc cagcagctgc
     1441 gcgacatcct gttcgccagc gtcggccagc acgcggtgcg caagctcgcc cgccagacct
     1501 tcgagcacgt gcatcggttg tcgcttcgct ttcatctcgc gcgccgcacc ggcgggctga
     1561 gccgcgtcat cgagcgcggc gtcaccggca tcgagaacat catccgcttc accatgctga
     1621 acacggcgcc gacgatcgtc gagttcatcg tcgtcggaac ggtgttcctg acgctgttcg
     1681 gcatcgacta tgtcggcgtg ctcgtcgtca ccatcgccct ctacgtctgg ttcaccgtcg
     1741 tcgcctcgaa ctggcgcatc ggcatccgcc gcgacatgaa caccgccgac accgacgcca
     1801 attccaaggc catcgacagc ctgctgaatt tcgagaccgt gaaatatttc ggcaacgagg
     1861 cgatggagtc cgagcgcttc gatctctcgc gcgccaaata cgagcgcgcc gccgtccgca
     1921 tctggacatc gctcggcttc ctcaatttcg gccaggccgt gatcttctac gccggcaccg
     1981 tggtcatcgg cgtgatgtcc gtgatgggcg tcctcgccgg caagatcacc atcggcgatt
     2041 tcgtcctgct caacaccttc ctcatgcaga tctaccggcc gctcaacttc atcggcatgg
     2101 tctatcgcga gatccgccag ggcctcaccg acatcgagga gatgttcaag ctgctcgacc
     2161 aggatccaga gatcatcgac aagcccggcg ccgcgccgct cgccatcacc ggcgcggtga
     2221 tccgcttcga ggacgtgcac ttccattacg accccgaccg cgaaatcctc aaggggatca
     2281 gcttcgaggt cccggccggc aagaccaccg ccatcgtcgg gcccaccggc gccggcaagt
     2341 ccaccatgtc gcggctgctc taccgcttct acgacgttac cggcggccgc atcaccatcg
     2401 acggccagga tctgcgcgac atcacccagg cgagcctccg ggccgctatc ggcatggtgc
     2461 cgcaggacac cgtgctgttc aacgacacca tcgcctataa catccagtac ggccggccgg
     2521 atgcgccgat gagcgagctc gaggccgccg ccgaccacgc ccagatcggc cgcttcattg
     2581 ccgcgctgcc gaagggttac gacaccccgg tgggtgagcg cgggctgaag ctctcgggcg
     2641 gcgagaagca gcgcgtcgcc attgcccgca ccatcctcaa gggcccgccg atcctcatcc
     2701 tcgacgaggc cacctcggcg ctcgacacca agaccgagca ggacatcaag tccgccctcg
     2761 atgccgtcag ccgcaaccgc accaccctgg tcatcgcgca ccggctctcg accgtcatca
     2821 atgcc
//
LOCUS       DATAZA010000497         4241 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_307680, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000497 DATAZA010000000
VERSION     DATAZA010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4241
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307680"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..322)
                     /locus_tag="VHZ56_12335"
     CDS             complement(<1..322)
                     /locus_tag="VHZ56_12335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4298801.1"
                     /translation="MPLIEVKGVVGGYGGAPILNGVDLSIERSDIGVVVGPNGAGKST
                     TLKAIFGLLRVTAGSIIFDGQEITNAVPDKLVPMGLSFVPQEKNVFTSMSVEENLEMG
                     AFIRR"
     gene            complement(324..1103)
                     /locus_tag="VHZ56_12340"
     CDS             complement(324..1103)
                     /locus_tag="VHZ56_12340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4298802.1"
                     /translation="MADAVIDVENVSKSFGGVAAVRDCSLTVRRGSITGLIGPNGAGK
                     STLFNLVAGNIVPDSGRVVFDGQDVTGLAPYALFSLGMLRTFQIAHEFSNMTALENLM
                     VVPDRQPGENIFRAWLTPGAVRARDIEVRQKANDVIDFLKLAHVKNELAGNLSGGQKK
                     LLELGRTMMVDAKAVLLDEVAAGVNRTLLQDLAANIERMNRELGYTFFVIEHDMDLIG
                     RLCDPVIVMAQGEKIAEGPMSEIRANPQIIEAYFGSPAAAA"
     gene            complement(1216..1578)
                     /locus_tag="VHZ56_12345"
     CDS             complement(1216..1578)
                     /locus_tag="VHZ56_12345"
                     /EC_number="4.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018116716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008929 - methylglyoxal synthase activity
                     [Evidence IEA];
                     GO_process: GO:0019242 - methylglyoxal biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal synthase"
                     /protein_id="HEX4298803.1"
                     /translation="MSRIGLVAHDDKKDDLVAWVLANREVLARHELWGTGTTGARVIE
                     GTGLAVTLLLSGPLGGDAQLGAMIAERRLDALIFFVDPLTAQPHDVDIKALIRLATLY
                     DTLFAVNRASAGAVLAAL"
     gene            complement(1646..2035)
                     /locus_tag="VHZ56_12350"
     CDS             complement(1646..2035)
                     /locus_tag="VHZ56_12350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4298804.1"
                     /translation="MPKASDVSVLIVDDQQSMRGICKYILTQLGFKDIIEAKSGRDAL
                     GKLEKANVQLIISDWNMEDIDGLTLLRVIRKHPKTAGMPFIMATGRSDKEQVKEAISF
                     GVNNYIIKPFDAGTMKKRIEAVIGVLS"
     gene            complement(2129..3172)
                     /locus_tag="VHZ56_12355"
     CDS             complement(2129..3172)
                     /locus_tag="VHZ56_12355"
                     /EC_number="3.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_function: GO:0050568 - protein-glutamine glutaminase
                     activity [Evidence IEA];
                     GO_process: GO:0006482 - protein demethylation [Evidence
                     IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0018277 - protein deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator protein-glutamate
                     methylesterase"
                     /protein_id="HEX4298805.1"
                     /translation="MSIRVLVVDDSALIREVLTRTLGRDGDIAVVGTAADPIEARQKI
                     KALNPDVVTLDIEMPNMNGLAFLDKLMRLHPMPVVMVSTLTTRGASETLLALELGAVD
                     FVAKPSTDLAGGLEAFGASLREKVRAAATSDVRSRTARSAPTQKLRTAAAPAGAVIAI
                     GASTGGVEAIRVVLSEMPADCPPIVIAQHMPAGFTTRFAARLDELSDLRVLEAEDRML
                     LETGTAYVARGDWHLRIERTLGQLRCRLAQDELASGHRPSVDILFESVARSVGPMAVG
                     AILTGMGRDGARGLKKMREAGAYTIGQSATSALVYGMPRVAFEEGAVIEQAPVEAIAG
                     RLASALTRLRPAA"
     gene            complement(3169..4023)
                     /locus_tag="VHZ56_12360"
     CDS             complement(3169..4023)
                     /locus_tag="VHZ56_12360"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HEX4298806.1"
                     /translation="MMEQGEFALGDREFERIRGRLYEVAGIALSDAKRTLVIARLSRI
                     VRTLGLPSFDAYLDFLEHRGAGADAQDFVNALTTNLTRFWREEHHFTHLVAHVGELIK
                     ARTRVAERRLRIWSAGCSTGQEPYTIAFSLLTAWPELKRWDFKILATDIDTAVIAKAA
                     TATYPEGELNELSADRAALFERLEDGRIRVPAAVAALVAFKPLNLMAEWPMKGPFDAI
                     FCRNVAIYFDKPTQAEVFGRLERILRPGGFLYIGHSENLGAGSAGFRLVGKTIYQARA
                     EARTRSAA"
     gene            complement(4020..>4241)
                     /locus_tag="VHZ56_12365"
     CDS             complement(4020..>4241)
                     /locus_tag="VHZ56_12365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298807.1"
                     /translation="GTGLTEAQNLARILGGLGTHLETLSNETEMISGALDEGSGAIGR
                     LDRQVGAVAAAASQALALPARRRQRADAG"
BASE COUNT          675 a         1508 c         1342 g          716 t
ORIGIN      
        1 cgcggcggat gaacgcgccc atctcgagat tttcctcgac gctcatcgag gtgaaaacgt
       61 tcttctcctg cggcacgaag ctcaggccca tcggcacgag cttgtccgga acggcgttgg
      121 tgatctcctg gccgtcgaag atgatgctgc ccgcggtgac ccgcagcagc ccgaagatcg
      181 ccttgagcgt cgtcgacttg ccggcgccat tgggtccgac gacgaccccg atgtcggatc
      241 gctcgatgct caggtcgacg ccgttgagga tcggtgctcc gccatatccg ccgaccacgc
      301 ccttgacttc gataagcggc attctaggcg gcggccgcgg gcgagccgaa ataggcttcg
      361 atgatctgcg gattggcgcg gatttcgctc atcggaccct cggcgatctt ctcgccctgc
      421 gccatcacga tcaccggatc gcagagccgc ccgatcaggt ccatgtcgtg ctcgatgacg
      481 aagaaagtgt atccgagctc gcggttcatg cgttcgatgt tggccgccag gtcctgcagc
      541 agcgtgcgat tgacgcccgc cgccacctcg tccagcagca ccgccttggc atcgaccatc
      601 atcgtccggc cgagctcgag cagcttcttc tggccgccgc tgagattgcc cgccagctcg
      661 ttcttgacgt gcgcgagctt caggaagtcg atgacgtcat tggccttctg ccgcacctcg
      721 atgtcgcggg cccgcaccgc acccggcgtc agccacgccc ggaagatgtt ctcgccgggc
      781 tggcgatcgg gaaccaccat caggttctcg agcgccgtca tgttggagaa ttcatgcgcg
      841 atctggaagg tccgcagcat ccccaggctg aacagcgcgt aaggcgcgag gccggtcacg
      901 tcctgaccgt cgaacaccac ccggccgctg tccggcacga tgttgcccgc caccaggttg
      961 aacagcgtcg acttgccagc cccgttcggg ccgatgagcc cggtgatcga accgcgcctg
     1021 accgtcagcg aacagtcccg cactgccgcg acgccaccaa agctcttgct gacgttctcg
     1081 acgtcgataa ccgcgtcggc cacccctgcc ccgctgcccg cctgactgcc cggctctgcc
     1141 ggccgttgcg gcagtttgcg catatgcggc aaacccggtc aaccttgacc ggacggtcaa
     1201 aagcgcacgg ttcggctaaa gcgcggcgag cactgcaccg gccgacgcac ggttgaccgc
     1261 gaacagcgtg tcatagagcg tcgcgagccg gatcagcgcc ttgatgtcga cgtcgtgcgg
     1321 ctgcgccgtc agcggatcga cgaagaagat cagtgcatcg agccgccgct cggcgatcat
     1381 cgcccccagc tgcgcgtcgc cgcccagcgg cccgctcagg aggagcgtga cggcgagccc
     1441 cgtcccctcg atcacgcggg ccccggtggt cccggtcccc cacagctcgt gtcgggccag
     1501 cacctcgcgg ttcgccagca cccaggcgac gaggtcgtcc ttcttgtcgt catgcgccac
     1561 gagcccgatg cgggacatgc gatcctccgg agaaatctgg cgaccggcgc gacgggcgca
     1621 tgggactagg cgtgagccag ccggctcagg acagcacgcc gatgaccgct tcgatgcgct
     1681 tcttcatcgt gccggcgtcg aacggcttga tgatgtagtt gttgaccccg aaggaaatgg
     1741 cttccttcac ctgctccttg tcggagcggc cggtggccat gatgaacggc atgccggccg
     1801 tcttgggatg cttgcggatg acccgcagca gcgtcagccc gtcgatgtct tccatgttcc
     1861 agtcggaaat gatcagctgg acattggctt tttcgagctt gccgagcgca tcgcggccgc
     1921 tcttggcctc gatgatgtcc ttgaagccca gctgcgtcag gatgtacttg cagatgcccc
     1981 gcatcgactg ctggtcgtcc acgatcagca cactgacatc gctcgccttg ggcatcacgc
     2041 aaacctttgc cgtgcccaac atcgaacgcg ggcaccctgc gaggctaggc ataaagcgtt
     2101 accattctct caatcggcag cgtcgggttc aggccgccgg ccgcagccgg gtgagcgcac
     2161 tcgccagccg cccggcgatg gcttcgaccg gggcctgctc gatcaccgcg ccctcctcga
     2221 acgctacccg cggcatgccg taaaccagcg ccgaggtcgc cgactggccg atcgtatagg
     2281 cgccggcctc gcgcattttc ttcagcccgc gggcgccgtc gcggcccatg ccggtgagga
     2341 tggccccgac cgccatcggg ccgacgctcc gcgccaccga ctcgaacagg atgtcgacgc
     2401 tcggccggtg gcccgaggcc agttcgtcct gcgccagccg gcatcggagc tgaccgaggg
     2461 tgcgctcgat ccgcaggtgc cagtcgccac gggccacata cgccgtgccg gtctcgagca
     2521 gcatgcggtc ctcggcctcc agcacccgca ggtcgctgag ctcgtccagc cgcgccgcga
     2581 agcgggtggt gaagccggcc ggcatgtgct gcgcgatgac gatcggcggg caatcggccg
     2641 gcatctcgct gagcaccacg cggatcgcct cgaccccccc ggtggaggcg ccgatggcga
     2701 tcaccgcccc ggccggcgcc gcggccgttc gcagcttctg cgtcggagcg gaccgtgccg
     2761 tccgactgcg cacgtcgctg gtcgcggcgg cacgcacctt ctcgcgcagg ctggcgccga
     2821 aggcctccag ccccccggcg agatcggtcg acggcttggc cacgaaatcc accgcaccca
     2881 gctcgagcgc cagcagcgtc tcgctggccc cccttgtggt gagcgtcgag accatcacca
     2941 ccggcatcgg atgcagccgc atcagcttgt cgaggaaggc gagcccgttc atgttgggca
     3001 tctcgatgtc gagcgtcacc acgtccgggt tgagcgcctt gatcttctgg cgcgcctcga
     3061 tcggatcggc ggccgtcccc acgaccgcga tatcgccatc gcggccgagg gtgcgggtca
     3121 gcacctcgcg gatcagcgcg gaatcgtcga cgaccagcac ccggatgctc atgctgcact
     3181 cctcgtccgc gcttcggcgc gggcctggta gatggtcttg ccgacgagcc ggaagccggc
     3241 gctgccggcg cccagatttt ccgagtgccc gatatagagg aagccgccgg gcctgaggat
     3301 ccgctcgagc cggccgaaca cttcggcctg cgtcggcttg tcgaaataga tcgcgacgtt
     3361 gcggcagaag atggcgtcga acggtccctt catcggccac tccgccatca aattcagcgg
     3421 cttgaacgca accagtgccg cgaccgccgc cggcaccctg atccgcccat cctcgagccg
     3481 ctcgaacagc gccgcgcggt cggcggacag ctcgttgagc tcgccctccg gataggtggc
     3541 ggtcgctgcc ttggcgatca ccgcggtgtc gatatcggtc gccaggatct tgaagtccca
     3601 gcgcttgagc tccggccagg cggtcagcag cgagaacgca atggtgtagg gctcctgtcc
     3661 ggtcgagcac ccggctgacc agatgcgcag ccggcgctcg gcaaccctcg tgcgcgcctt
     3721 gatcagttcg ccgacatgcg ccaccagatg ggtaaaatga tgctcttccc gccagaaccg
     3781 cgtcaaattg gtggtgagcg cgttgacgaa atcctgcgca tcggcacccg ccccgcggtg
     3841 ctcgaggaaa tcgagatagg cgtcgaacga cggcaggccc agcgtgcgca cgatcctcga
     3901 cagccgggcg atcaccagcg tccgcttggc atcgctcagg gcaatgcccg caacctcgta
     3961 gagtcgaccg cgaatgcgct cgaactcccg gtcgccgagc gcaaactcgc cttgctccat
     4021 catcccgcgt ccgccctttg ccgccgtcgc gccggcaatg ccagggcctg cgacgcggcg
     4081 gcggccaccg cgccgacctg ccggtcgagc cggccgatcg ccccgctgcc ctcgtcgagg
     4141 gcgccggaga tcatctccgt ttcattgctt agagtctcca gatgcgttcc gagcccgccg
     4201 aggatgcgcg cgaggttctg cgcctcggta aggccggtgc c
//
LOCUS       DATAZA010000498         1507 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_772363, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000498 DATAZA010000000
VERSION     DATAZA010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_772363"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..140
                     /locus_tag="VHZ56_12370"
     CDS             <1..140
                     /locus_tag="VHZ56_12370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEX4298808.1"
                     /translation="IKMFPSQAPFQPTVHDLHNNGRAFPPNHLHQSWLDYLYWDIELE
                     P"
     gene            201..461
                     /locus_tag="VHZ56_12375"
     CDS             201..461
                     /locus_tag="VHZ56_12375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019860642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051983 - regulation of chromosome
                     segregation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HEX4298809.1"
                     /translation="MAISADLGEKLEAVVNDLVTNGRYNSKSEVLREGVRLVQEREAA
                     LAELHVVLEKSIADSDAGRTKPLEEVVNRLSAKYGANAKKSA"
     gene            461..760
                     /locus_tag="VHZ56_12380"
     CDS             461..760
                     /locus_tag="VHZ56_12380"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEX4298810.1"
                     /translation="MEVRITATAEAELEAISSFIGEDNPARAESFGRELLDRCFGLSA
                     HPRRYPVATVWAGREFRRCRHGNYLIFYSIVNGDLVINHIVHSARDYVRLLFPEG"
     gene            complement(757..1299)
                     /locus_tag="VHZ56_12385"
     CDS             complement(757..1299)
                     /locus_tag="VHZ56_12385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HEX4298811.1"
                     /translation="MTPTTMSHSAPRALPADKILVGIAFVVALATIAGAWGSQLFGGL
                     VPCELCLAQRQAYYWGLPVLALVLILWNRLPLAVWYIGVLIAAAIFVWSTYMGSYHAG
                     VEWGWWPGPTSCTGTGGDLSFSDLSSGNVAKVIPCDQVQWRDPILKLSLAGYNALISA
                     GVVVLLLAAVVVQLRRPKNI"
BASE COUNT          283 a          459 c          517 g          248 t
ORIGIN      
        1 agatcaagat gtttccctcg caggcgccgt tccagccgac cgtgcacgac ctgcacaaca
       61 atggccgggc gtttccgccc aaccacctgc accagagctg gctcgattat ctctactggg
      121 acatcgagct cgagccgtag cagccgcttg gcttctctgc cgccaataac tattattgaa
      181 gcggatggat ggaggctggc atggcgatca gtgcggatct cggcgaaaag ctcgaagcgg
      241 tggtcaacga cctcgtgacc aatggccgct acaattccaa gagcgaagtc ctgcgggagg
      301 gcgtgcgcct ggtgcaggag cgcgaggcgg cgctggccga gctgcacgtc gtgctcgaaa
      361 aaagcatcgc cgactccgac gcaggacgga cgaagccgct cgaagaggtc gttaaccggc
      421 tcagcgcgaa gtacggggcc aacgcaaaaa agagcgcctg atggaggttc ggatcaccgc
      481 aactgcggag gccgagctcg aggcgatcag cagcttcatc ggagaggaca acccagcgcg
      541 ggcagagagc ttcgggcgcg aactgctgga tcggtgcttc ggcctatcgg cgcatccccg
      601 ccgctacccg gtggcgacgg tctgggcggg ccgcgagttc cgacggtgcc ggcatgggaa
      661 ctatctgatc ttctattcga tcgtgaacgg cgatctcgta atcaaccaca tcgtccattc
      721 ggcccgcgat tatgtgcggc tgctctttcc cgaaggctag atgttcttcg gccgccgcaa
      781 ctgcaccaca acggcggcga gcagcagcac cacgacaccc gccgagatca gggcgttgta
      841 gccggcaagg ctcagcttca ggatggggtc gcgccactgc acctggtcgc aggggatgac
      901 tttcgcgacg ttgccgctgg agagatcgga gaagctgagg tcgcctccgg tgccggtgca
      961 ggaggtcggg ccgggccacc agccccattc gaccccggcg tgatagctgc ccatgtaggt
     1021 cgaccagacg aagatggcgg cggcgatcag cacgccgatg taccagaccg cgagcggcag
     1081 gcggttccac aggatcagga ccagcgccag caccggcagg ccccagtagt aggcctggcg
     1141 ctgggcgagg cagagctcgc acgggacgag cccgccgaac agctggctgc cccaggcgcc
     1201 ggcgatggtc gcgagggcga cgacgaaggc gatgccgacc aggatcttgt cggcggggag
     1261 ggcgcgcggt gcgctatggc tcatggttgt cggggtcatc gcttggctgg tcctgtttga
     1321 cgccggattg gggccgatcg cgggcctaaa tcaacccgtc tcgcgccgat gttacggcac
     1381 gaagcgcggt cagtccgttt ccggttcgag gtgcaatcgc tgcatgatgc cgagggcgtt
     1441 gcgcggcgcg ttgggtttgt cggtcgacac gaagtaggca aagacatcgc gctcgggcgg
     1501 ctttccc
//
LOCUS       DATAZA010000499        11954 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_192246, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000499 DATAZA010000000
VERSION     DATAZA010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 11954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11954
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192246"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..387)
                     /locus_tag="VHZ56_12390"
     CDS             complement(<1..387)
                     /locus_tag="VHZ56_12390"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX4298812.1"
                     /translation="MTDDLGKALDGAADAWRRAFRREMEGQGLSAGAASELLTHLPAA
                     GLPQTALTQRAGLSKQAVQQLLDQLEAEGLVRREIDAADKRARQVRLTAAGQRHLELR
                     HEVRDRLAVQIEERLGKKLSAKLDKAL"
     gene            489..779
                     /locus_tag="VHZ56_12395"
     CDS             489..779
                     /locus_tag="VHZ56_12395"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HEX4298813.1"
                     /translation="MVAKLTAAERQAALGGLSAWSHDAAADTISRDFKFKDFSEAFGF
                     MTRVALLAQAADHHPEWRNVYNKVSITLTTHDAGGLTARDVALATAIDKLVT"
     gene            complement(772..4161)
                     /locus_tag="VHZ56_12400"
     CDS             complement(772..4161)
                     /locus_tag="VHZ56_12400"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008550161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="error-prone DNA polymerase"
                     /protein_id="HEX4298814.1"
                     /translation="MSGSVPDYVELVSTSNFSFLRGGSHPEELAVAAAGLGLTGFGLT
                     DRNSFAGVVRAYVALRDMEQRPPAGFRYLVGTRLCFADGTPDIVAYPTDRDAYGRLCK
                     LLSIGNLRKESEKGNSRLYFGDLAPGLSADTVVDLQAEDFTTGQLFILVPDETDWERS
                     EAVLATLSRKARGRVWIAGSCRFGGTDRARLRRIADIGRRCGIPMLATNDVLYHEPGR
                     RVLQDVVTCIREHITIEDAGRRLEPNAERHIKTPAEMARLFREHPEAIAETARFAARI
                     GFSLDQLKYNYPTEKIGNETTQETLERLTWEGAGRRYKNDIPQQVIEQLKEEFTLIAD
                     KGYAPYFLTVHDIVMHARYQLEILCQGRGSAANSVVCFCLEITEVNPTKVDLVFGRFL
                     STERDEPPDIDVDFEHERREEVMQYVYKKYGGNHTGLTANVICYRSRAALREVAKVFG
                     LSDDTIDAINQMHWGWDSSVATNDVKVLGLDASEPILAMVLECAGELRGFPRHLSQHV
                     GGFVITRDELDRLVPIGKSAMETRSIIEWNKDDIDALGILKIDVLALGMLTCLKRAFG
                     LMRDCYGRRISMTELQAEAHDAPAIAKPVFEMTHRADTIGVFQIESRAQMSMLPRLKP
                     DNFYDFVIEVAIVRPGPIQGGMVHPYLKRRLGQEKVVYPSKELERVLHKTLGVPLFQE
                     QAMQIAVKGAGFSPGEADRLRRSMATFKRTGGVTAFRDKFISGMLAKNYPREFAESCF
                     KQIEGFGSYGFPESHAASFALLVYVSCWLKCHYPDVFLTALLNSQPMGFYAPAQLIRD
                     AIEHGVEVRPVDINRSGYETLLEEGSASGPRVWGRHRAMRDQIWSDKAVRLGLNQISG
                     LKEAHANLLIGERGSGYGSVRDLYVRTAIPIATLEKLAEADAFQSLGLNRRKALWAVR
                     GLKGSDGAQSLELFRQADRPVVLADADPLLPLMAHSENVIHDYKTLSFSLKGHPMSFM
                     RGSLDRRGTVACADLEHHGNGDRVTVAGLVLVRQRPGTASGIVFATLEDETGIANIVI
                     WNKVFEANRRTILASRAMAVRGRLQVEGLVIHVVAESFIDLTADLVALAKGHDLGDRV
                     LARADEGTLDRTPAYDVPRLRQEEAAQRQARAALPRGRNFK"
     gene            complement(4158..5792)
                     /locus_tag="VHZ56_12405"
     CDS             complement(4158..5792)
                     /locus_tag="VHZ56_12405"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase Y family protein"
                     /protein_id="HEX4298815.1"
                     /translation="MTAARLPGLSGRRRYLMLHLPRWATDCLKRAEPALAASDRPLVL
                     WEKQHGAMRIVGLDAAAQGAGLSVGQSLSDARALVPGLEAREIDRGFTEQRFGEFADW
                     HSNASPIVSVVTDQAAYGDLCLDITGVSHLFGGEPGMLRRLSERLGERGFTVRGAIAP
                     TIGAAWALVHYSRQQCIDDNVEAALAPLPVAALRLEAAQIDSLTHLGLKRIGQLYGRN
                     RRDMQARFGTGFLLRLDQALGWVEEKLAPRLPLAECFAEHRFADPIGLLDDVLMCTRD
                     LAVQLSHRLEAMGMGAQAFHLFLYRVDHKVMTLSLNAARATRDADHIARLFANRAERL
                     GGEYDAGFGIDMIRLAANSLDPLAATQIGAFGIEDGLATLDHLYDRMSSRLGPLAVVH
                     AVPVNTHIPERAVRLAPVVAPQPMPAAMPPVVAGRPISLLPQPEPIVVLAEVPDAPPV
                     SMIWRRVSYRFVKSAGPERISAEWRQAGARLALSAEAIEAAASGEQPGRSFEEGETAR
                     DYYVVEDEAGRRFWLFRLGQFGLARTPSWFLHGFFA"
     gene            complement(5698..6534)
                     /locus_tag="VHZ56_12410"
     CDS             complement(5698..6534)
                     /locus_tag="VHZ56_12410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298816.1"
                     /translation="MLGKAETLETLRQRIAAFDTQPLLRGVDRTGDAAGRLLATPAGV
                     LHEVFSDSFVDSGAAFGFALGQARSLVLPSRPGLLFLQLGSDAQETGLPYGLGLKIFG
                     LGLDALVLVRTDTIVELLWAIEEAVACRAVAAIVADIAYSHREVDFTASRRLALRTAA
                     GGASVFLVRHGRGREASAARFRWKVSGLPSRPPPYDNHAPGPPRWRVVLEKGRLGNRR
                     GTAPDGEVYRVDWTDDGFVLANDSRDDSRDDSSETAGPQRPAALPHAASAALGDRLSE
                     AG"
     gene            6670..7593
                     /locus_tag="VHZ56_12415"
     CDS             6670..7593
                     /locus_tag="VHZ56_12415"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HEX4298817.1"
                     /translation="MTAKPIHVVLAMDDKYWAPAYALMRSVCLFTFRRTDLRFHIFTS
                     GLKPDHLAVIEDLQREFGATQIFYDIPHDPHFAAIADKARQSGQFPNIVYGRILIAKI
                     LPPDIERLIYLDCDMLVRVPIERLAEMDMQGYPLAAVPDYAGAQIMTRKSLIDPRRIF
                     DPAMRYFNSGLLLIDMHKWRELKVEDKFVEAIDSGLLAQIYYDQDFLNLTFRDNWLEL
                     DRFWNLLDPRPSHAALNPHVLHYTGERKPWLVRPKVAYARLYRHVMTNEIYYRYLIER
                     SPAWQKPLIRLVERLNRQVGVQGHSPFPVGS"
     gene            7640..8071
                     /locus_tag="VHZ56_12420"
     CDS             7640..8071
                     /locus_tag="VHZ56_12420"
                     /inference="COORDINATES: protein motif:HMM:NF016955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HEX4298818.1"
                     /translation="MFDAIARLFQEPEPHDLRNDPRLAVAALLVHLAAVDGTVDDVEK
                     RAVRAALQDHYGMDEEAVRALIREARRRDADAVDFYHFTSALSSLEENERIEIIRMMW
                     QVVYADRQNHELEDNMVWRIAELIGVSARQRTILRNQIAKA"
     gene            8142..8675
                     /gene="ppa"
                     /locus_tag="VHZ56_12425"
     CDS             8142..8675
                     /gene="ppa"
                     /locus_tag="VHZ56_12425"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEX4298819.1"
                     /translation="MNIDAIAIGKNPPDDINVIIEVPLGGEPIKYEIDKASGALFVDR
                     FLYTPMRYPGNYGFIPHTLCGDGDPLDVLVMNSRPLVPGAVVRSRPVGVLFMEDDGGQ
                     DEKILAVPVHKLTAMYDNVHDIGDVQPIQVERVKHFFTHYKDLEPDKWAKISHVGDAA
                     DARRVIVESIERARTKV"
     gene            8729..8914
                     /locus_tag="VHZ56_12430"
     CDS             8729..8914
                     /locus_tag="VHZ56_12430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298820.1"
                     /translation="MRIAGTIVGIILVLLGAVWIGQGSNLIGGSVMSGQSQWLWIGIV
                     VLIVGIVALWWTYRRRA"
     gene            8933..9547
                     /locus_tag="VHZ56_12435"
     CDS             8933..9547
                     /locus_tag="VHZ56_12435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013895351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloramphenicol phosphotransferase"
                     /protein_id="HEX4298821.1"
                     /translation="MSGRIVLLNGAPRAGKSSIAAALQASAKGAWINLGVDSVMAALP
                     QPLRPGLGLRPGGERPDLEPLVQQQYGALFDSIAAQARSGFDVVADVGIHDSYSRPLG
                     ILDDAVQRLAGLPVLFVGVRCPVETIMARRNADPRGGYYAAGDSVPAPVLRWQEAVHA
                     GKTYDLELDTSVLLAGECAAAIAVMIQSPPDPGAFNRLRRTAHR"
     gene            complement(9516..10436)
                     /locus_tag="VHZ56_12440"
     CDS             complement(9516..10436)
                     /locus_tag="VHZ56_12440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015242293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HEX4298822.1"
                     /translation="MANWTAADILAQTGKLAVVTGPTGLGYEIGLALARAGAEVVLAG
                     RNVQTGEASVARVRSMAAGGAVRFEALDLASLSSVKAFADRLLAAGRPVDILVNNAGV
                     MMVPERRTTADGFELQLGTNYLGHFALTGRLRPLLAAARARVVSVSSISANPGRIHFD
                     DLQLVRTYNPSRAYEQSKLAMILFAYELQRQSAANGWGISSLAAHPGVAATDLIDKGP
                     GASSLMSVATRVLPFLRQPAAQGALPILYAATSPEAVGGGYYGPDGFQQMRGYPRKIA
                     GPPQSHDASVAQRLWTVSEQLTDVRFGGGD"
     gene            10542..11105
                     /locus_tag="VHZ56_12445"
     CDS             10542..11105
                     /locus_tag="VHZ56_12445"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HEX4298823.1"
                     /translation="MRERKRRQTRQRIVEAGLDLFLRQGIDATTLDEIAAAADISRRT
                     FFAYFPAKEDIVLAWQDGADLALQQAVADAAPGRAPLAAVQVAIATLAPLFATHDFMQ
                     LDRLMRSTETLKAKKERHFEHQAQGLYLALARLWPDPARRKGLQIVAMVSIGCLKIAV
                     ETWLAEDGVRPITDCLDEAFAALRTEI"
     gene            complement(11124..>11954)
                     /locus_tag="VHZ56_12450"
     CDS             complement(11124..>11954)
                     /locus_tag="VHZ56_12450"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4298824.1"
                     /translation="SVVISAFAFGGVVYGLSGLGTVDANADQTATWIALGVGVVAMAV
                     FIWRQLRLQRSGTPLLDLRTFQSYNFSVSNVMFVIGMASMFGSLNLLPYYLQNVLKLE
                     PLYIGLILLPGALWMAALGPFVGRLYDRFGPKPLIVPAMFLISGVLWAMTLLGTDTWW
                     PLILVGYFFLCTGFSFLFGPLFTLSLGSVKPDLYAHGSALLGSIQQVAGAAGVALLIA
                     VMAARAQSLGGLDNVDALAAGIRMSFLVGAVISVFAVITAFFIRKPDPVPQGGWGGGH
                     "
BASE COUNT         2068 a         4189 c         3783 g         1914 t
ORIGIN      
        1 cagcgccttg tcgagcttgg ccgagagctt cttgcccagc cgctcctcga tctgcacggc
       61 gagccggtcg cgcacctcgt gccgcagctc gaggtggcgc tggccggccg cggtcagccg
      121 cacctgccgg gcgcgcttgt cggcggcatc gatctcccgc cgcaccagac cttcggcttc
      181 gagctggtcg agcaattgct gcaccgcctg cttgctgagg cccgcgcgct gcgtcagcgc
      241 cgtctgcggc aggccggccg caggcaggtg cgtcaacagc tcgctcgccg cgcccgccga
      301 cagcccctgc ccctccatct cgcgacgaaa cgcccgccgc catgcgtcgg cagcaccgtc
      361 cagcgccttg cccagatcgt ccgtcatctt gacgagtgtg ccccgcgccg tcggacgagt
      421 cgagggccga tcccggcagg gatcgtgcta ggctcctcgg cgttgagggg aacgacagga
      481 gcaacagcat ggtcgcaaag ctgacggcag cggaacggca ggcggcgctc ggcgggctgt
      541 cggcgtggtc ccacgacgcc gccgccgaca cgatctcccg cgacttcaag ttcaaggatt
      601 tctccgaagc gttcggcttc atgacccgcg tggcgctcct cgcccaggcc gccgaccacc
      661 atccggaatg gcggaacgtc tacaacaagg tgtcgatcac gctcaccacc catgacgccg
      721 gcgggctgac ggcccgggac gtcgccctcg ccaccgcgat cgacaagctc gtcacttgaa
      781 attgcgcccc cgcggcagcg ccgcgcgcgc ctgccgctgc gccgcctcct cctgccggag
      841 ccgcggcacg tcgtaggcgg gcgtgcggtc gagcgtacct tcgtcggcgc gggcgaggac
      901 cctgtcgccg agatcgtggc ccttggcgag cgccaccaga tccgcagtca gatcgatgaa
      961 gctctcggcg acgacgtgga tcaccagccc ctcgacctgc agcctgccgc gcacggccat
     1021 cgcccgtgag gcaagaatcg tccggcggtt ggcttcgaac accttgttcc agatgacgat
     1081 gttggcgatg ccggtttcat cttcgagcgt cgcaaagaca atgccgctcg ccgtccccgg
     1141 ccgctgccgc accagcacca ggccggcgac cgtgacccga tcgccattgc catggtgctc
     1201 gagatcggcg cacgccacag tcccccgcct gtcgaggctg ccgcgcatga agctcatcgg
     1261 atgccccttg agcgagaagg acagcgtttt atagtcgtgg atgacgttct cgctgtgagc
     1321 catcagcggc aacagcggat cggcatcggc cagcaccacg ggccggtcgg cctgcctgaa
     1381 cagctccagc gactgggcgc catcgctgcc cttgagcccg cgcaccgccc acagcgcctt
     1441 gcgccgattg agcccgagcg actggaaagc gtcggcctcg gcgagctttt cgagcgtcgc
     1501 gatgggtatt gcggtgcgga catagaggtc gcggaccgag ccgtacccgg agccgcgttc
     1561 tccgatcagg agattggcat gcgcttcctt gaggccggag atctggttga gtccgaggcg
     1621 caccgccttg tccgaccaga tctggtcccg catcgcccgg tgccgacccc acaccctcgg
     1681 gcccgaggcg gacccctctt cgagcagggt ctcatagccc gaccggttga tgtcgaccgg
     1741 tcggacctcg accccatgtt cgatggcgtc cctgatcagc tgtgccggcg cataaaatcc
     1801 catcggctgg ctgttgagca atgccgtcag gaaaacatcc ggatagtggc acttgagcca
     1861 gcaggagaca tagacgagta gcgcaaagga agcagcatgg ctctccggaa agccatacga
     1921 gccgaacccc tcgatctgtt tgaaacagga ttccgcaaac tctcgcggat agttcttggc
     1981 cagcatgccg ctgatgaact tgtcgcggaa ggcggtgacg ccaccggtgc gcttgaatgt
     2041 cgccatcgac cgccgcagac ggtctgcctc gccgggagaa aagccggccc ctttgacggc
     2101 gatctgcatc gcctgctctt ggaagagtgg cacgccaaga gtcttgtgca gcactcgctc
     2161 aagctccttt gacggataga cgaccttctc ctgtcccagt cttcgcttga gatagggatg
     2221 caccatgccg ccctggatcg gcccaggccg gacaatcgca acctcgatga cgaaatcata
     2281 gaaattgtcg ggcttgagac ggggcaacat cgacatctgc gcccggctct cgatctggaa
     2341 cacgccgatg gtgtcggcgc gatgcgtcat ctcgaacacc ggcttcgcaa ttgccggagc
     2401 gtcatgcgct tcagcctgca gctcggtcat gctgatcctg cggccatagc agtcgcgcat
     2461 gagaccgaag gcgcgcttca ggcaagtcag catgcccagg gccagcacat cgatcttgag
     2521 gatgccgagc gcgtcgatgt cgtccttgtt ccattcgatg atggagcgcg tctccatcgc
     2581 cgacttgccg atcggcacca gccggtcgag ctcgtcgcgg gtgatgacga agccgcccac
     2641 atgctggctc aggtgccgtg gaaagccccg caattcaccg gcacattcga gcaccatggc
     2701 gaggatcggc tcagaagcat cgaggccaag aaccttgacg tcgttggtcg cgacgctgct
     2761 gtcccatccc caatgcatct ggttgatcgc atcgatggtg tcgtcggaaa gaccgaagac
     2821 cttggccact tcgcgcaacg ccgcgcgcga gcgataacag atgacgttcg cggtaaggcc
     2881 ggtgtggttg ccgccatatt tcttgtagac atattgcatc acctcttcgc gccgctcgtg
     2941 ctcgaaatcg acgtcgatgt caggcggctc gtcgcgctcg gtagagagga accggccgaa
     3001 cacgagatcg accttggtgg gattgacctc ggtgatctcg aggcagaagc aaaccacgga
     3061 gttggcagcc gaaccacggc cctggcagag gatctcgagc tggtagcgag cgtgcatgac
     3121 gatgtcgtgc acggtaagga aatagggggc atagcctttg tcggcgatga gggtgaattc
     3181 ctccttgagc tgctcgatga cctgttgtgg gatgtcgttc ttatatcgcc tcccggcccc
     3241 ttcccaggtg agccgctcga gcgtttcctg cgtggtctcg ttgccaatct tttcggtcgg
     3301 ataattgtac ttgagctggt cgaggctgaa gccgatgcgc gcggcaaacc tggcggtctc
     3361 ggcgatcgcc tcggggtgct cgcggaacag ccgcgccatc tcggccggcg tcttgatgtg
     3421 gcgctcggca ttgggctcga gccggcggcc ggcgtcttcg atggtgatgt gctcgcgaat
     3481 gcacgtcacc acgtcctgca gcacccgccg gcccggctcg tgatagagca cgtcgttggt
     3541 cgcaagcatc ggtatgccgc agcgtcggcc gatgtcggcg atgcgtcgga gccgcgcccg
     3601 gtcggtgccg ccgaaccggc agctgcccgc gatccacacc cggccccggg ctttccgcga
     3661 cagcgtcgcc agcaccgctt cgctgcgctc ccagtcggtt tcgtccggaa cgaggatgaa
     3721 cagctggccg gtggtaaagt cctcggcctg aaggtcgacg acggtatcgg ccgacaggcc
     3781 cggcgcgagg tcgccgaaat agagcctgct gttccctttc tcgctttcct tgcgcagatt
     3841 gccgatgctg agcagcttgc acagccgtcc ataggcatcg cggtcggtgg gataggcgac
     3901 gatgtccggc gtgccgtcgg caaagcagag ccgggtgccc accaggtagc ggaagccggc
     3961 gggcggccgc tgctccatgt cgcgcaacgc cacataggcg cgcaccaccc cggcaaagct
     4021 gttgcggtcg gtgagcccga accccgtgag cccgaggccg gccgccgcaa ccgccagttc
     4081 ctccggatgc gagccgccgc gcaggaacga gaagttcgag gtcgagacca gctcgacata
     4141 gtccggcacc gaaccgctca tgcgaaaaag ccgtgcagga accagctcgg cgtgcgcgcc
     4201 agcccgaact gccccagccg gaacagccag aagcggcgac cggcctcgtc ctcgaccaca
     4261 taataatcgc gcgcggtctc gccttcttcg aaagagcgcc ccggctgctc cccgctggct
     4321 gccgcctcga tggcctcggc actgagcgcc aggcgcgccc ctgcctgccg ccattcggcg
     4381 ctgatccgct cgggtccggc ggatttcacg aaccggtagc tgacccgccg ccagatcatg
     4441 ctgaccggcg gggcatcggg tacctcggca agcaccacga tcggctcggg ctgcggcagc
     4501 aggctgatcg gccggcccgc cacgaccggc ggcattgcag cgggcatcgg ctgcggcgcc
     4561 acgaccggcg ccaggcgaac cgcccgctcc gggatgtggg tgttgaccgg aaccgcatgg
     4621 acgaccgcca gcggcccgag ccggctcgac atccggtcgt agagatgatc gagcgtcgcc
     4681 agcccgtcct cgatcccgaa ggcgccgatc tgggtagccg ccagcgggtc gagcgagttc
     4741 gccgccagcc ggatcatgtc gatgccgaag ccggcgtcgt actcgcctcc gagccgttcg
     4801 gcgcggttgg cgaacagtcg ggcgatgtgg tccgcatcgc gcgtggcgcg ggccgcattg
     4861 agcgacagcg tcatcacctt gtggtcgacg cgatagagga acaggtggaa cgcctgcgcg
     4921 cccatgccca tggcttcgag ccggtgactc agctgtaccg ccaggtcgcg cgtgcacatc
     4981 agcacatcgt ccagcagccc gatcgggtcg gcgaagcgat gctccgcaaa acactcggcg
     5041 agcggcaggc gtggcgccag cttttcttcg acccaaccca gcgcctggtc gagccgcagc
     5101 aggaaccccg ttccaaatcg cgcctgcatg tcgcggcggt tgcgcccata gagctgcccg
     5161 atccgcttca ggcccagatg cgtgaggctg tcgatctgcg ccgcctcgag ccgcagcgcc
     5221 gccaccggca ggggcgcgag tgccgcctcg acattgtcgt cgatgcattg ctgccgcgaa
     5281 taatggacca gcgcccacgc cgccccgatg gttggagcaa tggcgccgcg cacggtgaat
     5341 ccgcgctcgc ccagcctttc cgacaaccgg cgcagcatgc cgggttcgcc cccgaacaaa
     5401 tggctgacgc cggtgatgtc gaggcagaga tccccatacg cggcctggtc ggtgacgacg
     5461 gaaacgatcg gggacgcgtt ggaatgccag tcggcaaact cgccgaaccg ctgttcggta
     5521 aaccccctgt cgatctcgcg cgcctcgagc cccggcacca gcgcccgggc atccgagagc
     5581 gattggccga cgctgagccc ggcgccctgc gccgccgcgt cgagccccac gatgcgcatc
     5641 gcgccgtgct gcttttccca cagcaccagc ggccggtctg atgcggccag cgccggttca
     5701 gcccgcttca gacaatcggt cgcccagcgc ggcagatgca gcatgaggta gcgccgccgg
     5761 ccgctgaggc ccggcagtct cgctgctgtc atctctgctg tcatctctgc tgtcgtttgc
     5821 aagaacgaag ccatcgtccg tccagtccac gcgatacact tcaccgtccg gggccgtgcc
     5881 gcggcggttg ccgaggcggc ctttctcgag caccacccgc catcgcggcg gaccgggagc
     5941 atggttgtcg tagggcggcg gacggctcgg cagccccgac accttccagc ggaaccgggc
     6001 ggcgctggct tcccgcccac gcccgtggcg cacgaggaaa acgctcgccc cgccggccgc
     6061 cgtgcgcagc gccagccgcc gcgaggcggt gaaatccact tcccggtgcg aataggcgat
     6121 gtcggcgacg atcgcggcga cggcccggca ggccaccgct tcctcgatcg cccacagcaa
     6181 ctcgacgatg gtgtcggtgc ggaccagcac cagcgcatcg aggccgagac cgaaaatctt
     6241 gaggccgagc ccgtacggca gcccggtttc ctgcgcgtcg gacccgagct gcaggaacag
     6301 cagccccggc cgtgacggca gcaccaggct gcgcgcctgg ccgagcgcaa agccgaacgc
     6361 cgccccgctg tcgacgaagc tgtccgaaaa cacctcgtgc agcaccccgg cgggcgtcgc
     6421 cagcagccgc ccggcggcat cgcctgtcct gtcgaccccc ctgagaagcg gctgggtgtc
     6481 gaacgcggca atccgctgtc tgagcgtttc gagggtttcg gccttgccca gcatggggtg
     6541 ggctcccttg ttccatttga gaacaaatag agaacatcag actcggggat cgagtcaagc
     6601 gctgcttttc atcaccggct tgtgccctcg accccctatg ctacagaggc acccggccgg
     6661 gagcacgtca tgaccgcaaa acccattcac gtcgtccttg cgatggacga caaatactgg
     6721 gccccagcct atgcgctgat gcggtcggtc tgcctgttca ccttccgtcg caccgacctc
     6781 cgcttccaca tcttcaccag cggcctcaag ccagaccatc tggcggtgat cgaagacctc
     6841 cagcgcgaat tcggcgccac gcagattttc tacgacatcc cgcacgaccc gcactttgcc
     6901 gccatcgccg acaaggcccg ccagagcggc cagtttccca acatcgtcta cggccgcatc
     6961 ctgatcgcca agatcctgcc ccccgacatc gagcggctga tctatctcga ctgcgacatg
     7021 ctggtgcgcg tccccatcga gcgcctcgcc gagatggaca tgcagggcta tccccttgcc
     7081 gccgtgcccg actatgccgg cgcccagatc atgacccgca agagcctgat cgacccgcgc
     7141 cgcatcttcg atccggccat gcgctacttc aattcgggcc tgctgctgat cgacatgcac
     7201 aaatggcgcg agctcaaggt cgaggacaag ttcgtcgagg cgatcgacag cggcctgctc
     7261 gcccagatct actacgatca ggatttcctc aacctgacct tccgcgacaa ctggctcgaa
     7321 ctcgaccgct tctggaacct gctggatccg cgccccagcc acgccgcgct caacccgcac
     7381 gtcctccatt acaccggcga gcgcaaaccc tggctggtgc gccccaaggt cgcctacgcc
     7441 cggctctacc ggcatgtcat gaccaacgag atctactacc gctacctgat cgagcgctcg
     7501 ccggcctggc agaagccgct gatccggctg gtcgagcggc tgaaccgcca agtcggcgta
     7561 cagggccatt cgcccttccc cgttggatca tgacgcccac cagcgcgttt ccctgcacga
     7621 catccgaccg gagacgctga tgttcgacgc catcgcccgc ctgttccagg agcccgaacc
     7681 gcacgatctg aggaacgatc cccggctcgc ggtcgccgcc ctgctggtcc acctcgccgc
     7741 cgtcgacggc accgtggacg acgtcgaaaa gcgcgccgtg cgcgccgccc tgcaggacca
     7801 ttacgggatg gacgaggagg cggtacgggc cctcatccgc gaggcccggc ggcgtgacgc
     7861 cgacgccgtc gacttctacc acttcacctc ggcgctgagt tcgctcgagg aaaacgagcg
     7921 catcgagatc atccgcatga tgtggcaggt ggtttacgcc gaccggcaga accacgagct
     7981 cgaggacaac atggtctggc gcatcgccga gctcatcggc gtctccgccc gccagcggac
     8041 catcctgcgc aaccagatcg ccaaggcgtg aaaacccggc cgcccttgcc aaaagcgccg
     8101 cgccgacgga caatttcctt gcaaccggac gggcccatcg catgaacatc gacgccatcg
     8161 ccatcggcaa gaacccgccc gacgacatca acgtcatcat cgaggtgccg ctcggcggcg
     8221 agccgatcaa gtacgagatc gacaaggcct ccggcgccct gttcgtcgat cgcttcctct
     8281 ataccccgat gcgctacccc ggcaattacg gcttcatccc gcacaccctg tgcggcgacg
     8341 gcgatccgct cgatgtgctg gtgatgaact cgcggccgct ggtgccgggc gccgtggtgc
     8401 gctcgcgccc ggtcggcgtg ctgttcatgg aagacgatgg cgggcaggac gaaaaaatcc
     8461 tggccgtgcc cgtgcacaag ctcaccgcca tgtacgacaa tgtgcacgac atcggcgacg
     8521 tgcagccgat ccaggtcgag cgggtgaaac atttcttcac ccactacaag gacctcgagc
     8581 ccgacaaatg ggccaagatc agccatgtcg gcgacgccgc cgacgcccgc cgggtcatcg
     8641 tcgaatcgat cgaacgcgcc aggaccaagg tctgagtgcg ggatgaaacg gcgccgaccg
     8701 gcgttctgac ccaaggagac cattgaacat gcgcatcgcc ggaaccatcg ttggcatcat
     8761 cctcgtcctg ctcggggcgg tctggatcgg ccagggctcg aacctgatcg gcggctcggt
     8821 gatgtccggg cagagccagt ggctgtggat cggcatcgtc gtgctgatcg tcggcatcgt
     8881 cgcgctgtgg tggacctacc gacgccgcgc ctagccttcc ggaccggctg cgatgagcgg
     8941 ccgcatcgtc ctgctcaacg gcgccccgcg cgccggcaaa tcgtcgatcg ccgcggcgct
     9001 ccaggcaagc gcgaagggcg cctggatcaa cctcggcgtc gacagcgtca tggcggcgct
     9061 gccccaaccg ctgcgcccgg gcctggggct gcgacccggc ggtgaacggc ccgatctcga
     9121 gccgctggtc cagcagcaat atggagcgct gttcgactcg attgccgccc aggcgcgcag
     9181 tggattcgat gtcgtggccg acgtcggtat ccacgattcc tattcgcggc cgctgggcat
     9241 cctcgacgac gccgtgcaga ggctcgccgg cctgcccgtg ctgttcgtcg gtgttcgctg
     9301 cccggtcgag accatcatgg cgcgtcgcaa cgccgatccg cgtggcggat attatgcggc
     9361 cggcgacagc gttcccgcgc ccgtgctgcg ctggcaggag gccgtccacg ccggcaagac
     9421 ctacgacctc gagctcgata cgtccgtcct gctggccggc gaatgcgccg cggcgatagc
     9481 cgtcatgatc cagtcgccac ccgatcccgg tgcgttcaat cgcctccgcc gaaccgcaca
     9541 tcggtgagct gctccgacac tgtccacagg cgctgcgcca cgctggcatc gtgcgattgc
     9601 ggcggcccgg cgatctttcg cggatagccg cgcatctgct ggaagccgtc ggggccgtaa
     9661 tagccgccgc ccaccgcctc gggcgacgtc gccgcataaa ggatcggcag cgccccctgc
     9721 gccgccggtt gcctcaggaa cggcagcacc cgcgtggcga cgctcatcag gctcgatgcg
     9781 cccgggccct tgtcgatgag atcggtcgcc gccacccccg gatgcgccgc caggctcgag
     9841 atgccccagc cattggcggc gctttgccgt tgcagctcgt acgcaaacag gatcatcgcc
     9901 agcttcgact gttcgtacgc gcggctcgga ttgtaggttc gcaccagttg cagatcgtcg
     9961 aaatggatgc gccccggatt ggctgaaatg ctcgatacgc tgaccacccg cgcccgggcc
    10021 gccgcgagca gcggccgcaa ccgccccgtc agtgcgaaat ggccgaggta attggtcccc
    10081 agctgcagct cgaacccgtc tgcggtggtc cgccgctccg gcaccatcat gacgccggca
    10141 ttgttgacga gaatgtcgac cggacgcccc gcggccagca ggcggtcggc aaaggccttg
    10201 accgagctga ggctggcgag gtcgagggcc tcgaaccgga cggcaccccc ggcggccatg
    10261 ctccggaccc gcgccaccga ggcttcgccc gtctggacgt tgcgcccggc cagcaccacc
    10321 tcggcacccg cccgggccag cgccaggccg atctcgtagc cgagcccggt ggggccggtg
    10381 acgacggcga gttttcctgt ctgcgcgaga atatcggccg cggtccaatt cgccatttat
    10441 gcctccagtg catttatgct cacaatgcat taaagcacgg agtgcttatt tgcaagacag
    10501 gcggctcatg ccataagcgg cggatggcga aaggcgaagg gttgcgggaa aggaagcgcc
    10561 ggcagacccg ccagcgcatc gtcgaggccg gcctcgatct gtttctgcgc cagggcatcg
    10621 acgccactac cctcgatgaa atcgccgctg ccgccgatat ctcgcgacgc accttcttcg
    10681 cctactttcc ggccaaggaa gatatcgtgc ttgcctggca ggacggcgcc gacctcgcgc
    10741 tgcagcaggc ggtggccgat gcagcccccg gccgcgcacc gctcgccgcg gtgcaggtcg
    10801 cgatcgccac gctggccccg ctgtttgcga cccacgattt catgcagctc gaccgcctga
    10861 tgcgctcgac cgagacgctc aaggccaaga aggagcgcca tttcgaacac caggcgcagg
    10921 gcctctacct ggcactggcg cggctctggc cggatccggc tcgccgcaag ggcttgcaga
    10981 ttgtcgcgat ggtctcgatc ggctgcctga agatcgccgt cgagacctgg ctggccgagg
    11041 atggcgtgcg gccgatcacc gactgccttg acgaggcctt cgcggcgctc cggaccgaaa
    11101 tctgagcgcc gcgccttcgg tggtcagtga ccgccgcccc agccgccctg cggcaccgga
    11161 tcgggcttgc ggatgaagaa cgccgtgatc acggcgaaca ccgagatcac cgcgccgacg
    11221 aggaacgaca tgcggatgcc ggccgccagc gcgtcgacat tgtcgagccc gccgagcgac
    11281 tgcgcccgcg ccgccatcac cgcgatcagc agcgccacgc cggcggcacc cgcgacctgc
    11341 tggatcgagc cgagcagcgc cgagccgtgc gcgtagagat cgggctttac cgagcccagg
    11401 ctgagcgtga acagcggccc gaacaggaac gagaaccccg tgcacaggaa gaaatagccc
    11461 accaggatca gcggccacca ggtgtcggtg cccagcagcg tcatcgccca cagcacgccc
    11521 gagatcagga acatcgccgg cacgatcagc ggcttgggac cgaaccggtc gtagagccgg
    11581 ccgacgaacg ggccgagcgc ggccatccac agggcgcccg gcagcaggat gaggccgata
    11641 tagagcggct ccagcttcag cacgttctgc aggtagtacg gcagcaggtt gaggctgccg
    11701 aacatcgagg ccatgccgat cacgaacatc acgttcgaga ccgagaaatt gtaggactgg
    11761 aaggtcctga gatcgagcag cggcgtgccg gaccgctgca gccgaagctg ccgccagatg
    11821 aagacggcca tggcgacgac acccacgccg agcgcgatcc aggttgcggt ctggtcggca
    11881 ttggcatcga ccgtgcccag tcccgacagg ccatagacca cgccgccgaa ggcgaaggcc
    11941 gagatgacca ccga
//
LOCUS       DATAZA010000500         2745 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2978707, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000500 DATAZA010000000
VERSION     DATAZA010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2745
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2978707"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..825)
                     /locus_tag="VHZ56_12455"
     CDS             complement(<1..825)
                     /locus_tag="VHZ56_12455"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX4298825.1"
                     /translation="MVKAAFLGLGVMGYPMARHLKTKGHEVTVYNRTTAKAEKWVGEH
                     GGRLAATPRQAAEGQDIVFACVGNDNDLREVTLGPDGAFAGMGKGKLFVDHTTASAEI
                     ARELHAAAGVGGFDFLDAPVSGGQAGAENGQLTVMVGGDPAPFERAQPTIMAFAKACR
                     LLGPSGSGQLAKMMNQICIAGVVQGLAEAIHFGKAAGMDIEAVVEVISKGAAQSWQME
                     NRYKTMNAGKFDFGFAVDWMRKDLSIVLGEARQNGARLPLTALVDQFYAEVQGMGGK"
     gene            complement(839..2542)
                     /locus_tag="VHZ56_12460"
     CDS             complement(839..2542)
                     /locus_tag="VHZ56_12460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018481740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4298826.1"
                     /translation="MTASAAAPVLSVRDLSVEFALRHGVFRAVSGVGFDLMPGRTLGL
                     VGESGSGKSVTARALMQLVDPPGRIVGGSIQLGDTDIARLPRRGAAIRAIRGADISMI
                     FQEPTSSLSPVHTIGAQIVEVLRLHLQLRPAEARAQTIALLRQVEIPDPEHNIDRYTF
                     EFSGGMRQRAMIAMALACNPRLLIADEPTTALDVTTQAEVLDLIRRIQRERQMAMLLI
                     THDMGVVAEVADDVAVMYRGEIVEAGTVDQVFHGAVHPYTKRLLGAVRKLEGSAAQKL
                     PPPAVAPVPILSVKGLGKTYAVGRGAFGGKAKAALRAVDDVSFELMAAESLGIVGESG
                     SGKTTLGRLILRVVEPTDGEVVFTPAGGAPLAVRSLDRAGLRRYYGQVRLVFQDPFSS
                     LNPRMNVRQIIGEPLLASGRLSGPALNARVAELLDMVGLGADAMDRYPHAFSGGQRQR
                     IGIARALAPDPRVLVADEPTSALDVSIRSQILDLLLDLQRRLGLSFIFISHDIGVIRY
                     FCDRVAVMRRGRIVELGDARTVCTTPSHPYTRALISAVPYPDPRAPRMSRRERYSENS
                     A"
     gene            complement(2532..>2745)
                     /locus_tag="VHZ56_12465"
     CDS             complement(2532..>2745)
                     /locus_tag="VHZ56_12465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017961798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4298827.1"
                     /translation="IAETSLSFLGIGLKPPVVSWGVLLQDAQNLRAIASAPWLLLWPA
                     LAVMVAVLSFNFFGDGLRDAADPYDS"
BASE COUNT          431 a          940 c          951 g          423 t
ORIGIN      
        1 cttgccgccc atgccctgca cctcggcgta gaactggtcg accagcgcgg tgagcggcaa
       61 tctggcgccg ttctgccgcg cctcgccgag cacgatcgag aggtccttgc gcatccagtc
      121 gacggcgaag ccgaaatcga atttgccggc gttcatcgtc ttgtagcgat tctccatctg
      181 ccaggattgc gccgcgccct tgctgatcac ctcgacgacg gcctcgatat ccatgccggc
      241 agccttgccg aaatggatgg cttccgccag cccctgcacg accccggcga tgcagatctg
      301 gttcatcatc ttggcgagct ggcccgagcc cgagggacca agcaggcggc aggccttggc
      361 aaaggccatg atcgtcggct gcgcccgctc gaagggcgcc gggtcaccgc ccaccatgac
      421 ggtcagctgg ccgttctcgg cgcccgcctg gccgcccgag accggcgcgt cgaggaaatc
      481 gaagccgccg acgcccgccg ccgcgtggag ctcgcgcgcg atctccgccg aggccgtggt
      541 gtgatcgacg aacagcttgc ctttgcccat ccccgcgaag gccccgtcgg gacccagcgt
      601 cacctcgcgc aaatcgttgt cgttgccgac gcaggcgaag acgatgtcct ggccctcggc
      661 cgcctggcgc ggcgttgcgg cgagccggcc gccatgttcg cccacccatt tttcggcctt
      721 tgcggtggtg cggttgtaca ccgtcacctc gtgacccttc gtcttgaggt gcctcgccat
      781 ggggtacccc atgacaccga gccccaggaa tgctgccttg accatgatga cctctctttc
      841 aggcggagtt ttcggaatag cgttcgcgcc ggctcatgcg cggcgcgcgc gggtcgggat
      901 agggcacggc ggaaatcagt gccctggtat aggggtgaga cggcgtcgtg cacacggtcc
      961 tcgcgtcgcc gagctcaacg atcctgccgc gccgcatcac cgccacccga tcgcagaaat
     1021 agcggatgac gccgatgtcg tggctgatga agatgaagct caggccgagc cggcgctgca
     1081 ggtcgagcag cagatccaga atctggctgc ggatcgacac gtcgagggcc gaagtgggct
     1141 cgtcggcgac gagtaccctg gggtcggggg cgagggcccg cgcgatgccg atgcgctggc
     1201 gctggccgcc cgagaaggca tgcggatagc ggtccatcgc gtcggcgccg aggcccacca
     1261 tgtccagcag ctcggcgacg cgtgcattga gcgccggacc ggagagccgg ccgctggcca
     1321 gcagcggctc gccgatgatc tggcgcacat tcatgcgcgg attgagcgag gagaacggat
     1381 cctggaaaac cagccggacc tgcccgtaat agcgacggag cccggcgcgg tcgaggctgc
     1441 gcacggcgag cggcgcgcct cccgcgggcg tgaagacgac ctcgccgtcg gtcggctcga
     1501 cgacgcggag gatgaggcgg cccagcgtcg tcttgcccga tccgctctcg ccgacgatgc
     1561 cgaggctctc ggccgccatc agctcgaagc tgacatcgtc aacggcccgc agcgctgcct
     1621 ttgccttgcc gccgaaggcg ccgcggccca ccgcgtaggt ctttcccagc cccttgaccg
     1681 acaggatcgg caccggcgcg acggccggcg gcggcaactt ctgcgcggcg gagccctcga
     1741 gcttccgcac cgcgcccagc aggcgcttgg tgtaagggtg cacggcgccg tggaacactt
     1801 ggtccacggt gccggcctcg acgatttcgc cgcgatacat gaccgccacg tcgtcggcga
     1861 cttcggccac gacgcccatg tcgtgggtga tcagcagcat cgccatctgg cgttcgcgct
     1921 ggatgcgccg gatgaggtcg agcacttcgg cctgggtggt cacgtcgagc gccgtcgtcg
     1981 gctcgtcggc aatcagcagg cgcgggttgc aggcgagcgc catggcgatc atcgcccgct
     2041 gccgcatgcc gccggagaac tcgaaggtat agcggtcgat gttgtgctcg gggtcgggaa
     2101 tttcgacctg ccgcagcagg gcgatggtct gggcccgcgc ctctgccggc ctgagttgca
     2161 ggtgcaggcg caggacctcg acgatctgcg cgccgatggt gtgcaccggc gacagcgagc
     2221 tcgtcggctc ctggaagatc atgctgatgt cggcaccgcg gatggcgcgg atcgctgcgc
     2281 cgcgccgcgg cagcctggcg atatcggtgt cgccgagctg gatcgagccg ccgacgatgc
     2341 gcccgggagg atcgaccagc tgcatcaggg cccgcgccgt caccgacttg ccggaaccgc
     2401 tctcgccgac caggccaagg gttcgtcccg gcatgaggtc gaacccgaca ccgctgacgg
     2461 cgcggaagac gccgtgccgc agggcgaatt ccacgctcag gtcacggacg ctgaggacgg
     2521 gggcggcggc gctagctgtc ataggggtcc gccgcatcgc gcaggccgtc gccgaagaag
     2581 ttgaacgaca gcacggcgac cataactgcc agcgccggcc acagcagcag ccatggcgcg
     2641 ctggcgatgg cgcgcaggtt ctgcgcgtcc tgcagcagga cgccccagct gaccaccggc
     2701 ggcttgaggc cgatgccgag gaacgacagc gaggtctcgg cgatg
//
LOCUS       DATAZA010000501         2032 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1468860, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000501 DATAZA010000000
VERSION     DATAZA010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1468860"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1412
                     /locus_tag="VHZ56_12470"
     CDS             <1..1412
                     /locus_tag="VHZ56_12470"
                     /inference="COORDINATES: protein motif:HMM:NF024267.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4298828.1"
                     /translation="WRLDPKWLRPGMDERAILDKLRTDGMLPAEPDYQAWRARHLQSY
                     TLKTPRESEPWYLPDGRTVQVISAPAGPAGGVIYVFEDITDQLKLKSQHKTQIDVQRS
                     TLNALSEGVAVFGTNGRLTLSNPRLSTLWKLPTNLLETNPHIDQIIEAVHRVLPEDGP
                     NLWRSLKRGIVDLNPTRTDQHGRIPRADGKLLDYAITRLPDGQTMMTFVDVTESANYQ
                     RVLTERNEALVTADRLKDAFVQNVSYELRSPLTNIIGFADLLASESVGPLNAKQKAYT
                     DYIRASSVTLGVLIDNILDLATVDAGVANLRPELQDVPALIEKARTGLAATFPDVDGE
                     KPLNIEVDIPETLPPLFADGTRIVQVLYNLLSTAARFSEPGGLVKLTVLERGGRMLFV
                     IEDEGAQTSEQMRAALSDRGDAAASTVRQRGAGLGLAIVRTFVSLHGGTISVERREPR
                     GSRVVVSLPLASAVPHAAE"
     gene            1449..1874
                     /gene="tsaE"
                     /locus_tag="VHZ56_12475"
     CDS             1449..1874
                     /gene="tsaE"
                     /locus_tag="VHZ56_12475"
                     /inference="COORDINATES: protein motif:HMM:TIGR00150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEX4298829.1"
                     /translation="MGSERIFLADDAATAALGARLAAELEAGDLVLLSGGLGAGKTAL
                     ARAILRVLLADAGLEVPSPSFALVQPYEGNGRTVLHADLYRLGGDREVDELGLFDRPE
                     AIVLVEWPERSHDLLSRPARLVQLAIPADRKGRVAELVT"
BASE COUNT          324 a          698 c          726 g          284 t
ORIGIN      
        1 tgtggcggct cgatcccaaa tggctgaggc cggggatgga cgagcgtgcc atcctcgaca
       61 agctgcggac cgacggcatg ctgccggccg agcccgacta ccaggcgtgg cgggcacggc
      121 acctccaatc ctacacgctc aagacgccgc gcgagagcga gccgtggtac ctgccggacg
      181 gccggacggt gcaggtgatt tcggcgccgg caggcccggc cggtggcgtc atctatgtgt
      241 tcgaggacat caccgaccag ctcaagctca agagccagca caagacgcag atcgacgtgc
      301 agcgctcgac gctcaacgcg ctgagcgagg gcgtggcggt gttcggcacc aacggccggc
      361 tgacgctgtc caacccgcgg ctgtcgacgc tgtggaaact gccgaccaac ctgctcgaga
      421 ccaatccgca catcgaccag atcatcgagg cggtgcatcg cgtgctgccc gaggacgggc
      481 ccaatctctg gcgcagcctg aagcgcggca tcgtcgatct caacccgacg cgcaccgacc
      541 agcacggtcg catcccgcgc gccgacggca agctgctcga ctacgccatc acccggctgc
      601 ccgacgggca gaccatgatg acgttcgtcg acgtgaccga aagcgccaac taccagcggg
      661 tgctgaccga gcgcaacgaa gcgctggtga ccgccgaccg gctgaaggac gcgttcgtgc
      721 agaacgtcag ctacgagctg cgctcgccgc tgaccaacat catcggcttc gccgacctgc
      781 tggcctcgga gagcgtgggc ccgctcaacg ccaagcagaa ggcctacacc gactacatcc
      841 gcgcctcgag cgtgacgctg ggggtgctga tcgacaacat cctcgacctg gcgacggtgg
      901 acgccggcgt cgccaacctc cggcccgagc tgcaggacgt gccggcgctg atcgagaagg
      961 cgcgcaccgg gctcgcggcg accttcccgg acgtcgacgg ggaaaagccg ctcaacatcg
     1021 aagtcgatat ccccgaaacg ctgccgccgc tgttcgccga cggcacccgg atcgtccagg
     1081 tgctctacaa tctgctgtcg acggcggcgc ggttttccga gccgggcggg ctggtcaagc
     1141 tcaccgtgct cgagcgcggc ggccggatgc tgttcgtgat cgaggacgag ggcgcccaga
     1201 ccagcgagca gatgcgcgcc gcgctgagcg accgcggcga cgcggcggcg agcacggtgc
     1261 ggcagcgcgg cgccgggctc gggctcgcca tcgtgcgcac cttcgtcagc ctgcatggcg
     1321 gcacgatcag cgtcgagcgg cgggagccgc ggggcagccg cgtggtggtg agcctgccgc
     1381 tggcgagtgc cgtgccgcac gcggcggaat aggtttccgg ccgcggccgg cgatgctatc
     1441 ggtcggcgat ggggagcgaa cgcatctttc tggcggacga cgcggcgacg gcggcgctcg
     1501 gggcgcggct cgcggccgag ctcgaggcgg gcgatctggt gctgctgtcg ggcgggctcg
     1561 gagccggcaa aaccgcgctg gcgcgggcga ttctgcgggt actgctggcc gatgccgggc
     1621 tcgaagtgcc ctcgccgagc tttgcgctgg tgcagcccta tgagggcaat gggcgcacgg
     1681 tgctgcacgc cgatctctac cggctgggcg gggaccgcga ggtcgacgag ctcggcctgt
     1741 tcgaccggcc cgaggcgatc gtgctggtgg aatggccgga gcgcagccat gaccttctct
     1801 cacggcccgc cagactggtg cagctcgcca ttccggcgga ccgcaaaggc cgcgtcgcgg
     1861 agctcgtgac gtgaggcgcg gggcactgtt ctcgatcgcg ccgcacgggc aattcctcga
     1921 cctcctggcg gcgggcgtgc tcgacggcac gctgctcaat ggctgggacc gcagcggccc
     1981 gttctggctc agcgacgtca ccatcatcct gccgacgcgg cgcgcgcggc tc
//
LOCUS       DATAZA010000502         1933 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1355636, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000502 DATAZA010000000
VERSION     DATAZA010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1933
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1355636"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(159..305)
                     /locus_tag="VHZ56_12480"
                     /pseudo
     CDS             complement(159..305)
                     /locus_tag="VHZ56_12480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611960.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            563..1757
                     /locus_tag="VHZ56_12485"
                     /pseudo
     CDS             563..1757
                     /locus_tag="VHZ56_12485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330561.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
BASE COUNT          365 a          601 c          628 g          339 t
ORIGIN      
        1 tgcagacgtt cgaagccgtc tcagccttgc ggggacttgg tctctgcgag aaaacttcag
       61 taccgaccgg cgtggcggtc gttggcgaga accgcggcga ggctcgctat tagccacact
      121 gaaccgcccc gggtttgccg gaggctgttt cgtttgagtc acgccgccat agcgggttgc
      181 tccgtcatgg catagtagcg ttcctcggct tcagccggcg ggatgttgcc gatgggttcc
      241 agcagccggc gattgttgaa ccagtcgacc catccgagcg tggcgaactc gacggcctcg
      301 catgagggcg gattcaaacg gtcgtcgcaa cacctgaacg aaggaggttg cgttgagctc
      361 tggaaagcgc cgatcacatc gttctggacg ggcgccgctg ccatcaccgg gacggccgcc
      421 agcagcagag cgatctcaac ttcagcgatt ttggttgggg atagcgcggg gaatggccag
      481 cgaggatgct gcgctggcgg caggcatgtc gcagcctgtc ggatccagat tgtttcgaga
      541 ggccggcggc atgccaccag cgatgttccg atcgtcagcc aagccgccgt ccgaacggta
      601 tctcaacttt gcggaacgtg aggagattgc gcttcttcgc gttcagggcc tctcgaggcg
      661 cgagattgga cgccgtcttg gtcggtctgc ctccaccatc tcccgtgagc taaggcgcaa
      721 cgccgcgaca cgcagcggcg ggttggaata tcgtgcatcg acggcccaat ggcacgccga
      781 gcgatcggga cggcgtccga aagtcgccaa gcttgtgctg aactcagcct tacgcctcta
      841 cgtcgaggag aggctggccg gaacggtcgc ggctcccgat ggtgctatcg ttgccggtcc
      901 tgtggtctcc tggagtggac gccgtcatgg acaacgaaag gctcgtcgat ggagcacggc
      961 atggagcccg gagcagatcg ccaggcggtt agctgtcgac tttccgactg acgagaccat
     1021 gcgggtcagt cacgaagcta tttatcaagc acttttcatc caaggccgag gggcccttcg
     1081 gcgtgaactg accgcatgcc tgcgaaccgg gcgggcgttg cggacgccgc gggcacgcgt
     1141 gggccagcgc ggcaagggct tcgtgtcatt cgagatcatg atcagccagc gcccggccga
     1201 ggcggatgac cgtgcagttc cggggcactg ggagggcgac ctcattctgg ggcttggcag
     1261 ttcggcaata ggcacgctcg tcgagcgcac gacgcgcttt acgatgctgt tgcatctgcc
     1321 gcgactgaac ggtcacggcg acacgccgcg agccaagaat ggacctgctc tcgccgggca
     1381 tggcgccgag gctgttcgcg atgcgatcac gcgcaccatc gtaaccctgc ctcaggaact
     1441 gcgccgctcg ttgacgtggg accaaggcgc cgagatggcc caacacgcgg cgcttaagat
     1501 cgacaccgga atccaagtct acttctgcga tcctcagagc ccttggcagc ggggcgccaa
     1561 cgagaacacc aacggattgc tgcgccagta ctttccgaaa ggcacggacc tgagcgtgca
     1621 tagctccgag acactcgccg ccattgctgc aaccctcaac gggcgaccac gaaaagccct
     1681 ccgctggaag accccggccg aagcgcttga ccaatggctg gcatagaacc caatatcctg
     1741 ttgcgacgac cgtttgaatc cgccctgtga cccgcggtcg gaatgatgca ctcagccctc
     1801 cggcggccgg cgcgtccgga tagcagcttt cagcgccgcg acagcgagcc gggcgtcgat
     1861 cgagcggctg attgcatagc ccacgacacg gcgcgaccaa gcatcgagga tcgccgccag
     1921 atagacgaag ccc
//
LOCUS       DATAZA010000503         4277 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3446363, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000503 DATAZA010000000
VERSION     DATAZA010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4277
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3446363"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..653)
                     /locus_tag="VHZ56_12490"
     CDS             complement(<1..653)
                     /locus_tag="VHZ56_12490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298830.1"
                     /translation="MQLDSFTILVAGCAVLIMLGLILGFMWVRDRATTALLWWSLPFL
                     LGGAALVFYTAPTWDTDVVAISFGNALRMLALGCLWQGLRVFQGRRALLWPLLLVCVG
                     WMTLCFVPAFVGSMVARIVVVSLLNTALCALSAHELWRNRAETLASRWPTIVVFSSFA
                     LLMFVRSALVPIAPFPVGARPLDSTWLAVFMWVVFGHAILGAVLFIAMIKERREAEQR
                     "
     gene            complement(734..1639)
                     /locus_tag="VHZ56_12495"
     CDS             complement(734..1639)
                     /locus_tag="VHZ56_12495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division plane positioning ATPase MipZ"
                     /protein_id="HEX4298831.1"
                     /translation="MGRTGTHVIVVGNEKGGSGKSTTAFHLAIYLLYQGFRVASIDVD
                     SRQQTFTNYVKNRRNWAQARDLQLPHTTHFHLPLTKSDSIRENQKLEFDLFRQAVVEV
                     EGVADFLVVDTPGFDTHLTRLAHSLADTLITPLNDSLIDLDVMAHVDPVTGDPREMSH
                     YARLVQRARTERLAIDGRTIDWILVRNRISMLSSRSMRLVQSAIEKIAVRLGSRVAEG
                     IAERVIFRSLFPMGLTVFDPLDEDLLGGLPSMSHLSARQEYRQLLEALRLPISERAAA
                     RNAALAAFSEADKSTARFEHMASST"
     gene            complement(1776..2204)
                     /locus_tag="VHZ56_12500"
     CDS             complement(1776..2204)
                     /locus_tag="VHZ56_12500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1489 domain-containing protein"
                     /protein_id="HEX4298832.1"
                     /translation="MHMIKLCVGVATLAELESYRAERAHWWGADYGEDVHVHRTRTMP
                     KRRAEIEGIGSIYWVIAGVVRCRQPILRLAEAVDEQGLSCCDIIMAPDMVRVSPRPKR
                     PFQGWRYLDQKEAPPDLHSAGFEEAGDGELALELARLGLI"
     gene            2348..2719
                     /locus_tag="VHZ56_12505"
     CDS             2348..2719
                     /locus_tag="VHZ56_12505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015339139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HEX4298833.1"
                     /translation="MVTTDGKIKAARRIEKLASHLRLAEVELSTHYGDPSLKVRGKAF
                     ATVKEAGILVLHCPLDMKELLMEAAPDIYYQTDHFKGWPGLLIRLDAISEEELGLRLE
                     DAWRFKAPKSLAATRPTARDA"
     gene            complement(2742..>4277)
                     /locus_tag="VHZ56_12510"
     CDS             complement(2742..>4277)
                     /locus_tag="VHZ56_12510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009489791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX4298834.1"
                     /translation="RGRLRDYANSGHRDHLRNHRLFEYGHNTGPEIEGNPRVYVDALG
                     FEHLVAPHVTGYQPLASAVGGGTLVYGMQAWRFHPKDFRMASTYGVPDGSSLADWPIA
                     YEDLEPWYDRAEWEIGVAGTPGGDPNGGPRRREFPMPPLPGGGSAEVLRRGARQLGLN
                     TFAVPLLLNSTARDGRAACIQCGSCIGFPCPVDAKNGTQNTVLKRALATGNCTLVTGV
                     VAERIATDDAGRVIGADLIHDDGRRETVRAKAVVVAAAAVETARLLLASATAREPDGL
                     GNTSGHVGRHLQGHYYPGAFGRFDAEVGSSFGPGPSIATTDFNHGNPGIVGGGMLADD
                     FVFTPMMFWQAQWPPGVPRWGRDAKDWMRRNFHHVTQARGPVQEIPSPHARVELDRYV
                     RDSRGRPVVRLSGTTHGETIRTARFMRGKAIEWLTAAGATEIWGGEPRLQLSGHQHQA
                     GTARMSATAETGVTDQWGRVWGHDNLFVADGSLHVTNGGYNPALTIMALGMRTGDHVA
                     RSI"
BASE COUNT          719 a         1447 c         1470 g          641 t
ORIGIN      
        1 cgttgctccg cctcgcgccg ttccttgatc atggcgatga acagcaccgc gccgaggatc
       61 gcgtggccga aaaccaccca catgaaaacg gcgagccagg tcgaatccag cggcctcgcg
      121 ccgaccggga atggcgctat ggggacgagc gccgagcgca cgaacatgag cagcgcgaaa
      181 ctgctgaaga cgacgatcgt cggccagcgc gacgcgaggg tttcggcgcg attgcgccac
      241 agctcgtgcg ccgatagcgc gcagagggcg gtgttgagca gcgacaccac gacgatgcgg
      301 gccaccatgc tgccgacgaa cgccggcacg aagcacagcg tcatccagcc gacgcacacc
      361 agcagcagcg gccagagcag cgcacgccgt ccctggaaga cccgcaaacc ctgccagagg
      421 cagccgagcg ccagcatgcg cagcgcgttg ccgaacgaga tggcaaccac gtcggtgtcc
      481 caggtcgggg cggtataaaa gaccagcgcc gcaccgccga gaaggaacgg cagcgaccac
      541 cacagcagcg ccgtcgtcgc ccgatcgcgg acccacatga agccgaggat gaggcccagc
      601 atgatgagca ccgcgcagcc ggcaacgagg atcgtgaaac tgtcgagctg cacggacgcg
      661 ccgcctccag agcggtgggt gcatggtagc gcaggagttc tttaacgaag ctgaatcggt
      721 ggacgcagac tcctcaggtc gagctcgcca tgtgctcgaa ccgggcggtc gatttgtcgg
      781 cctccgagaa cgccgccagg gccgcgttgc gggccgcggc gcgctcgctg atcggcagcc
      841 gcagggcctc gagcagctgc cggtattcct gccgggcgct caaatgcgac atcgacggca
      901 ggccgccgag aaggtcttcg tccagcgggt cgaacaccgt cagccccatc gggaacagcg
      961 agcggaaaat cacccgctcg gcaatcccct cggcgacgcg gctgccgagc cgtacggcga
     1021 tcttttcgat ggcgctctgc accagccgca tcgagcgcga gctcagcatc gagatgcggt
     1081 tgcgcacgag gatccagtcg atggtccggc cgtcgatggc gaggcgctcg gtgcgcgccc
     1141 gctgcaccag gcgggcatag tggctcatct cgcgcgggtc gccggtgacc ggatcgacat
     1201 gcgccatgac gtcgaggtcg atcaggctgt cgttgagcgg ggtaatcagg gtgtcggcca
     1261 gcgaatgggc gagccgggtg aggtgggtat cgaagcccgg ggtgtcgacg accaggaaat
     1321 cggcgacgcc ttcgacctcc accaccgcct ggcggaacag gtcgaactcc agcttctggt
     1381 tttccctgat cgagtcggac ttggtcagcg gcaggtggaa atgcgtcgtg tgcggcagct
     1441 gcaggtcgcg cgcctgcgcc cagttgcggc ggttcttcac atagttggtg aaggtctgct
     1501 ggcggctgtc gacatcgatc gaggcaaccc gaaagccctg gtacaacagg taaatcgcga
     1561 ggtgaaaagc cgtggtcgac ttgcccgacc cacccttctc gttaccaaca acaatgacat
     1621 gcgtgcccgt gcgccccatg ccgtactcca cgcccccgtg ccggaatctg cggcaaaatt
     1681 gtgatttggt tcaagaggca gtttggtcac aaaccacgta gcgccctgac ttgcgcaaac
     1741 gaaatggctt gaccgcggtc gcgagaccgc ccggttcaga tgagtccgag cctcgcgagt
     1801 tccagcgcaa gctcgccgtc gcccgcctcc tcgaagccgg cgctgtgcaa atccggcggc
     1861 gcctctttct ggtcgaggta gcgccagccc tggaatggac gcttggggcg gggcgatacc
     1921 cgcaccatgt cgggtgccat gataatgtcg cagcaagaga gcccctgctc gtcgacagcc
     1981 tcggccagcc ggaggatggg ctgccggcag cgcacgacgc cggcgatgac ccagtagatc
     2041 gagccgatgc cttcgatttc ggcgcgccgt ttcggcatgg tgcgggtgcg atggacgtgc
     2101 acgtcctcgc cgtagtcggc gccccaccag tgcgcccgct cggcgcggta ggattcgagc
     2161 tcggccagcg tcgccacccc gacgcacagc ttgatcatgt gcatcgtcgg agcaacgcgc
     2221 cgtgccggca ccgctgtctg aatcgccgtt ccagccgtcc ttgctatcgc catcgctccc
     2281 tgggtccgcg gccggtgtag ccaattggct ccggatgcgc cagacttggc catcggaggg
     2341 cgagcacatg gtcacaaccg atggcaagat caaggcggcg cgccggatcg aaaagctcgc
     2401 ctcccacctg cggctggcgg aggtcgagct ctccacccac tatggcgacc cttcgctcaa
     2461 ggtgcggggc aaggcctttg ccaccgtcaa ggaggccggc atcctggtgc ttcactgccc
     2521 gctcgacatg aaggagctgc tgatggaggc ggcgcccgac atctactacc agaccgacca
     2581 tttcaagggc tggccgggcc tgctgatccg gctcgatgcg atctccgagg aagagctggg
     2641 gcttcgcctc gaagatgcct ggcgcttcaa ggcgccgaaa tcgctcgccg cgacccggcc
     2701 gaccgcgcgg gacgcctgat cgccgctgcg ggcccccagc ctcagatcga gcgggcgacg
     2761 tggtcgccgg tgcgcatgcc gagcgccatg atggtcagcg ccgggttgta gccgccattg
     2821 gtgacatgca gcgagccgtc ggccacgaac agattatcgt ggccccagac gcggccccac
     2881 tgatcggtga cgccggtctc ggccgtcgcg ctcatccgcg ccgtgccggc ctgatgctgg
     2941 tgcccggaaa gctggagccg gggctcgccg ccccagattt cagtcgcgcc ggcggcggtg
     3001 agccactcga tggccttgcc gcgcatgaag cgggcggtgc ggatggtctc gccgtgcgtc
     3061 gtgcccgaca gtcgcaccac aggccggccg cggctgtcgc gcacgtaccg atcgagctcg
     3121 acgcgcgcgt gcgggctggg gatttcctgc accggtcccc tcgcctgcgt cacgtggtgg
     3181 aagttccgcc gcatccagtc cttcgcgtcg cggccccagc gcgggacgcc gggcggccat
     3241 tgcgcctgcc agaacatcat cggggtgaag acgaagtcgt ccgccagcat gccgccgccg
     3301 acgatgccgg ggttaccgtg gttaaaatcc gtggtggcga tgctcgggcc gggcccgaac
     3361 gagctgccga cctccgcgtc gaagcggccg aacgccccgg gatagtagtg accctgcaag
     3421 tgccggccga catggcccga cgtgttgccg aggccatccg gctcgcgggc ggtggccgag
     3481 gcgagcagca gccgtgcggt ctcgaccgcc gcggcggcga ccaccaccgc cttcgcccgg
     3541 acggtctcgc gccggccatc gtcatggatg aggtcggcgc cgatcacccg cccggcgtcg
     3601 tccgtcgcga tgcgttccgc gacgacgccg gtcaccagcg tgcaattgcc ggtcgcgagg
     3661 gcccgcttga ggacggtgtt ctgcgtgccg ttcttggcat cgaccgggca cgggaagccg
     3721 atgcagctgc cgcactggat gcaggccgcg cgcccgtcgc gggcggtgct gttgaggagc
     3781 agcggcacgg cgaaggtgtt cagccccagc tgccgggcgc cgcggcgcag cacctcggcc
     3841 gagccgccgc cgggcagtgg cggcatcgga aactcgcgcc ggcggggccc gccattgggg
     3901 tcgccgcccg gcgtgccggc gacgccgatt tcccactcgg cgcggtcgta ccagggctcg
     3961 agatcctcgt aggcgatcgg ccagtcggcc agcgacgagc cgtccggcac gccataggtc
     4021 gaggccatgc ggaagtcctt gggatggaag cgccaggcct gcatgccgta gaccagcgtg
     4081 ccgccgccga ccgccgaggc cagcggctgg tagccggtga catgcggcgc aaccagatgc
     4141 tcgaagccca gcgcatcgac gtaaacccgc ggattgccct cgatctccgg gccggtgttg
     4201 tggccgtact cgaacagacg atggttgcgc agatggtcgc gatgacccga attggcgtag
     4261 tcgcgcagcc ggccgcg
//
LOCUS       DATAZA010000504         3058 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1703479, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000504 DATAZA010000000
VERSION     DATAZA010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3058
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1703479"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(267..1061)
                     /gene="istB"
                     /locus_tag="VHZ56_12515"
     CDS             complement(267..1061)
                     /gene="istB"
                     /locus_tag="VHZ56_12515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HEX4298835.1"
                     /translation="MSKISVDTARLPLLLHELRLPAINRLWQDIAARADKEGWPAIRF
                     LSALAELEVAERARRRIERHLAESRLPTGKTLDSFDFNAVPMLSKAHAVALASGDTWL
                     GKGANLLLFGPPGSGKSHVAAALGRALIENGYRVLFMRTTDMVQRLQAERQALQLAAA
                     IAKLDRFDLLVLDDLSYVSKDQAETSVLFELIAARYERRSLMITANQPFGDWSKVFPD
                     PAMTVAAIDRLVHHATIFEMNVESYRRRAAVARKTKPAPQPDGEPA"
     gene            complement(1058..2584)
                     /gene="istA"
                     /locus_tag="VHZ56_12520"
     CDS             complement(1058..2584)
                     /gene="istA"
                     /locus_tag="VHZ56_12520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032488953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEX4298836.1"
                     /translation="MPGNHITDQQVRLYMDLRRTHTRETAAARAGLSTTTGARIDADP
                     RLPSQSQIPRGRRRPDPLAAIWDSEIVPLLEAAPGLRPVSIIGEMLRRHRDFPAATRR
                     TLERRVRTWQALHGPERDVIFRQEHPPGQQGLSDFTDANPLGVTIAGVQFTHRLYHFR
                     LAFSGWQHADVVLGGESFVALAEGLQNALWALGGAPREHRSDSLSAAFRNLDRDAAKD
                     QTERYEALCAHYGMIATRNNLGVAHENGVIEASHGHLKQALAQALLLRGSSDFADLPL
                     YRRFVAEIIGRANAHRRRELEIERPLLKPLPPRRTTDFEEDLVIVTRSGGFLLRRVFY
                     TVPSRLIGHRLRVRIYDERIECLLGSEPVLTLPRGRAPQGRAMRGRTVHVVDYRHVIH
                     ALRRKPHALLNLVYRDQLFPRAAFRNTWDALIAAEPPRIACRIMVQLLALAHERCCEA
                     ALAAELDAILGSGKLPDLDILEARFAPASTTSPHVTVTLPSAITYDALLSSDAVEVLA
                     "
BASE COUNT          511 a          927 c         1062 g          558 t
ORIGIN      
        1 cgaggctgta gcccttgccg tcttcgtgcg gccacatcgc accgatgcgg gtccagaagg
       61 cgttctcgcg gtccgggaca tggtaagcga tgaaggcggg tgtgttcttg cctgtagcgc
      121 gacaatcagg gtggttgcgg gcgacaatca ggatgggtac ctgcgacacc gcttgagcgc
      181 atgattgtcg tctgtgattg ccgctggcaa gaggcaaaag gtgcgccttg attgtcgctg
      241 gcgagcgaca atcaaggcgg caaggatcag gcgggttcgc cgtcgggctg aggcgcgggc
      301 ttggttttgc gtgcgacggc ggcgcgccga cggtagcttt cgacgttcat ctcgaagatg
      361 gtggcgtggt ggaccagtcg gtcgatggcg gcgacggtca tcgccgggtc ggggaacacc
      421 ttgctccagt ctccgaaggg ctggttcgcg gtgatcatca gcgagcggcg ttcgtaacgg
      481 gcggcgatga gctcgaacaa cacgctggtc tcggcctgat ccttgctgac gtaggagagg
      541 tcatcgagga ccagcagatc gaagcggtcg agcttggcga tggccgccgc gagttgcagc
      601 gcctgtcgct cggcctggag gcgttgcacc atatcggtgg tgcgcatgaa cagcacgcgg
      661 tagccgtttt cgatcagcgc ccggccgagc gcggcggcaa cgtggctctt gccgctgccg
      721 ggcggaccga acaacagcag gttggcgccc ttgccgagcc aggtgtcacc ggaggcaagt
      781 gccacggcgt gagccttgct gagcattggc acggcattga agtcgaaact gtcgagcgtc
      841 ttgcccgtcg gcagacggga ttcggcgaga tggcgctcaa tccggcgcct cgcacgctcg
      901 gcgacttcga gttcggcgag cgccgagagg aaccgtatgg caggccagcc ttctttgtcg
      961 gcccgtgcgg cgatgtcctg ccagaggcgg ttgatggcgg gcagccgcaa ctcgtgcaac
     1021 agcagcggca gtcgggccgt atcgacggag atcttgctca tgccaagacc tccacggcat
     1081 cactgctcag caacgcgtcg taggtgatcg ccgacggcaa ggtgacggtg acgtgtggcg
     1141 aggtcgtgct ggccggggcg aagcgtgcct ccaggatgtc gaggtccggc agctttccgc
     1201 tgccgaggat cgcgtccagt tctgccgcca atgccgcctc acaacaacgc tcatgtgcga
     1261 gcgcgagcag ctggaccatg atccggcaag cgatgcgcgg cggctcggcg gcgatcagcg
     1321 cgtcccaggt attgcggaat gcggcgcgcg ggaagagctg gtcgcgatag accaggttga
     1381 gcaatgcgtg cggcttgcgg cgcagcgcgt ggatgacatg ccggtagtcg acgacatgaa
     1441 cggtgcggcc gcgcatggcg cgaccttgcg gtgcccggcc gcgcggcagc gtcagcaccg
     1501 gctcgctgcc aagcaggcat tcgatccgct catcatatat acgtacgcgc agacgatgac
     1561 cgatcagccg cgacggcacg gtgtaaaaca cacggcggag caggaagccg ccgctgcggg
     1621 tgacgatgac gagatcttcc tcgaagtcgg tggttcggcg cggcggcagt ggcttgagca
     1681 acggccgttc gatctccaac tcgcggcgcc ggtgagcgtt ggcgcggccg atgatctcgg
     1741 caacaaaccg gcggtagagc ggaagatcgg cgaagtcgct gctgccgcgc agaagcagcg
     1801 cctgtgccag ggcctgcttg agatggccat ggctggcctc aatgacacca ttctcgtgcg
     1861 caacaccgag gttgttgcgc gtggcgatca taccgtaatg cgcacaaagc gcttcatagc
     1921 gttcggtctg atctttcgcg gcatcacggt cgagattgcg gaacgctgcc gagagactgt
     1981 cgctgcggtg ctcgcgcggt gcacctccca gcgcccacag tgcattctgt agtccctcgg
     2041 ccagcgcgac gaaactttcg ccgcccagca ccacatcggc atgctgccaa ccggagaacg
     2101 ccaggcggaa gtgatagagt ctgtgggtga actggacgcc cgcgatggtg acaccgagtg
     2161 gattggcgtc ggtgaagtcc gacaagcctt gctgccccgg cggatgctcc tggcggaaga
     2221 tcacgtcgcg ttccggcccg tgcagcgcct gccaggtgcg cacccggcgc tccagggtgc
     2281 gccgcgtcgc ggccggaaaa tcgcgatgcc gacgcagcat ctcaccgatg atgctgaccg
     2341 ggcgcagacc cggcgccgct tccagcagcg ggacgatctc gctgtcccag atcgccgcca
     2401 gcgggtctgg cctgcggcgg ccgcgcggga tctgtgattg agagggcaac cggggatcgg
     2461 catcgatccg agcgccggtc gtggtgctga ggcctgccct ggcggcagcg gtctcgcgtg
     2521 tatgggttcg tcggaggtcc atgtacagtc tcacctgttg gtccgtgatg tgattgccgg
     2581 gcaccggggg tctcttctgg agagttgaga accctcgaca ttcggcatgc gtcacggagt
     2641 cgcaggcagg cccttataag gggccatgtt gctgcggggt tcagcctacg gtcgggctac
     2701 gcccgacctc cggttgaacc ccgcagcaac atccatcctg attgtcgctg acatccatcc
     2761 tgattgtcgc cggacaggtt cccgcacagt gctccattcc gacaggattt gtcgtgcagt
     2821 tttctggcga taaatggccg tcttcaggcg ccgcgggccg cctgacggga atcagatgat
     2881 tcccgtcacc gggacccgca cgcatggcca tcgtcggaat ggcgcaaccc tctgtcccgc
     2941 ctgcaaaatt gcgccgaccc gttccagctt tgtccgctta tctgtcaaat ccgggcgttt
     3001 cgtgcgttct ggcctgttcc tgtgacacgg gcggccggcg gctgggattg ctgccccg
//
LOCUS       DATAZA010000505         5023 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2167201, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000505 DATAZA010000000
VERSION     DATAZA010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5023
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2167201"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..499)
                     /locus_tag="VHZ56_12525"
     CDS             complement(<1..499)
                     /locus_tag="VHZ56_12525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298837.1"
                     /translation="MRIIDSHVHYGFWDKLFTREAEEGFLEVLWAHCQEVGVEKVALL
                     ANPGRRGNDMLSRALEARPDFVIAMGRLELDHDPVSTVEDFYQRGFHGIKTIGVSKNY
                     DHADYMPYYEAAAARGLRMLFHTGIQGGPADYLEGGKEDAWKAPPAAGTQAEDELVAR
                     LKKDIS"
     gene            complement(576..1814)
                     /locus_tag="VHZ56_12530"
     CDS             complement(576..1814)
                     /locus_tag="VHZ56_12530"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HEX4298838.1"
                     /translation="MKRLWSAVLGLALSVATPAFADTNLVFAFWGDPPEVPPFQKIAT
                     DYMAKHPDVHIELQNAPWSGYFTKLDTQLAAGGGPDVFFITNVPSYAARNTLEDLGPW
                     IQKTNFPIDQYVKDSLRIHSLNGKLYSIPRDNATNVLYYNKDDFDKAGIKYPDGTWKW
                     ADLEDAAKKLTVTAGGRVTRYGLVLESNMWPMFVYQNGGSVFDDPVQPTTFTLADDKG
                     TAAIQWLGDLINKDKVVPNFAEADQMGGTASMFAADQASMSITNASRLGTYAGNTFQW
                     AVAPLPAGPDGVQANEAGGAGFAMNANSKVKDAAWAFMQYLCGPDGQIAFTSSGGSPA
                     VPAMIGNNDVKASFKAPFADVFLAQSLLGKVFPQFPTYVDITNKLIQPALDKVWNGES
                     TAADALGGIKDQVNAALKAQ"
     gene            complement(1837..2766)
                     /locus_tag="VHZ56_12535"
     CDS             complement(1837..2766)
                     /locus_tag="VHZ56_12535"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase family protein"
                     /protein_id="HEX4298839.1"
                     /translation="MSERIDVLVAGEYYCDMIFSGLDAPPSLGGEAFARGLSVRPGGC
                     YNMALGLTRLDVRTAWACDFGTDMFSRLVLEAAAGDGLDPAGFRHVGHSLQRVSAAFS
                     GRGERGFITYREAALRAPDREVVTRLRPKWLLQTFRPEPEWLSFVRDAKSAGVRIFGD
                     CNGEGADLATPGVREFIGLCDVFSPNEAEAMTLTGTVGTEDALARLAGLAPTIVIKRG
                     AHGAIAIANGQRHEQPALPVETVDTVGAGDAFAAGFLAAAVGGAPLDGQLLSAVACGS
                     LSTAGAGNSANPSAGQLRAFMARLHPTPSHASA"
     gene            complement(2763..4118)
                     /locus_tag="VHZ56_12540"
     CDS             complement(2763..4118)
                     /locus_tag="VHZ56_12540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010976108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HEX4298840.1"
                     /translation="MKLAIIGGGGVRAPLFVQSALKRAGRLGLTEICLMDTDAEQLQL
                     IGVLCAELARRAGTGVAITTTTSADEAFTGVDHVVTTVRPGGAEGRITDERIAHRHGV
                     LGQETTGACGFAMAFRSIPTILSYARRLREVAPDAWLYNFTNPAGLVSQALSDAGISR
                     CVGICDSANGAQNAIAHRLGIDPQAVEADLFGLNHLSFTRQAKVDGVDRLPEALADDA
                     FLAGTNLRVFEPRVVRRQGMWINEYLYYYHYVDQAMAAHGNGPTRGEEVLELNRQLIA
                     DLRRIDAARHPDAALAAYFDYEHRRSGSYMAHATQIEADTDEEAAPADDGEGYAGVAL
                     SLMEALEGRGRIRTGLNVVNHGAIADLHDDDVVEVSCIVDQNGIQPVPVGRMPEDQGS
                     LVHSVKHYERLAAKAILTRDRALAIDALVAHPLVLSYSRAEPLVDDFLAAYPAYAEGW
                     A"
     gene            4263..5009
                     /locus_tag="VHZ56_12545"
     CDS             4263..5009
                     /locus_tag="VHZ56_12545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018896687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX4298841.1"
                     /translation="MNQISREDARPLYKQVKDRLLEVLADGSVPPMGKLASERELVEH
                     YGVSRITVRQAMRELVAEGHLRSHPGKGFYATGRSSAQAFELELLRSFTATAERHGLR
                     PGSRLLHGRLVAADDRLAASLEVSPGAPVVSLRRLRLLDAQPVAIAQDWIAAALVPGL
                     LDLDWQPGNRSLYSELRTRYGLVPDRGETILAARLALSDEAQLLELERRAAVLTVEQI
                     AYSRDGRPINATLSVHHPTRYPLRLEQSGR"
BASE COUNT          754 a         1719 c         1727 g          823 t
ORIGIN      
        1 gcgaaatgtc cttcttgagc cgcgccacca gctcgtcctc ggcctgcgta ccggccgccg
       61 gcggcgcctt ccaggcgtct tccttgccgc cctcgagata gtcggcgggc ccaccctgga
      121 tgccggtgtg gaacagcatc cggaggccgc gcgccgccgc cgcctcgtaa tacggcatgt
      181 agtcggcatg gtcgtagttc ttcgacacgc cgatggtctt gatgccgtga aagcctcgct
      241 ggtagaaatc ctcgaccgtg ctcaccggat cgtggtcgag ctcgagccgg cccatggcga
      301 tgacgaaatc cggccgcgcc tccagcgccc gcgacagcat gtcgttgccg cgccggccgg
      361 gattggcgag cagcgccacc ttctcgacgc ccacttcctg gcagtgcgcc cacagcacct
      421 cgaggaagcc ttcctcggcc tcgcgggtga agagcttgtc ccagaagccg tagtggacgt
      481 ggctgtcgat gatccgcatg tgtcgctctc tcgtggatgg cctcgcggcg atcggggcgg
      541 ccgcttgcgc gagccgcccc gatgccaggg aggaactatt gcgccttcag cgcggcgttg
      601 acctggtcct tgatgccgcc cagcgcgtcg gccgccgtcg actcgccgtt ccagaccttg
      661 tcgagggccg gctggatcag cttgttggtg atgtcgacat aggtcgggaa ctgcgggaac
      721 accttgccca gcaggctctg cgccaggaac acgtcggcaa acggtgcctt gaacgaggct
      781 ttgacgtcgt tattgccgat catcgccggc accgccggcg agccgccgga cgaggtgaag
      841 gcgatctgcc cgtccggacc gcacaggtac tgcatgaacg cccacgcagc gtccttgacc
      901 ttgctgttgg cgttcatcgc aaagccggca ccgcccgcct cgttggcctg cacgccatcg
      961 ggacccgccg gcagcggcgc caccgcccac tggaaggtgt tgccggcata ggtacccagc
     1021 cgcgaggcgt tggtgatcga catcgacgcc tggtcggcgg cgaacatcga ggcggtgccg
     1081 cccatctggt cggcctcggc gaagttcggc acgaccttgt ccttgttgat caggtcgccc
     1141 agccactgga tcgccgccgt gcccttgtcg tcggcgaggg tgaaggtggt cggctgcacc
     1201 ggatcgtcga acactgaacc gccgttctgg tagacgaaca tcggccacat gttggattcg
     1261 agcaccaggc cgtagcgggt gacgcggccg ccggcggtga ccgtcagctt cttggcggcg
     1321 tcctcgaggt cggcccactt ccaggtgccg tccggatatt tgatgccggc tttgtcgaaa
     1381 tcgtccttgt tgtagtagag cacgttggtc gcgttatcgc gcgggatcga atagagcttg
     1441 ccgttgagcg agtggatccg gagcgaatcc ttgacgtact ggtcgatcgg gaagttcgtc
     1501 ttctggatcc acggcccgag gtcctcgagc gtgttgcgcg ccgcatagct cggcacattg
     1561 gtgatgaaga acacatccgg cccgccgccc gcggcgagtt gcgtatcgag cttggtgaaa
     1621 tagcccgacc acggcgcgtt ctgcagctcg atgtgcacgt ccggatgctt cgccatgtag
     1681 tcggtggcga tcttctggaa cggcggcacc tccggcggat cgccccagaa ggcaaacacc
     1741 aggttggtgt cggcgaaagc cggcgtggcg acgctgaggg caagtcccag cacggcagac
     1801 catagtctct tcatgacgtc tctccctttt tctctctcac gccgaagcgt gcgacggtgt
     1861 tgggtgcaag cgggccatga acgcccgaag ctgcccggca gatggattgg cgctgttgcc
     1921 ggcgccggcg gtcgacagcg agccgcaggc gaccgcgctc agcaattgtc cgtcaagcgg
     1981 cgccccgccg acggccgccg cgaggaagcc ggcagcgaac gcgtcgccgg cgccgaccgt
     2041 gtccacggtc tcgaccggca gcgccggctg ctcgtggcgc tggccgttgg cgatggcgat
     2101 ggcaccgtgc gcgccgcgct tgatcacgat ggtcggcgcc aggcccgcga gccgcgccag
     2161 cgcgtcctcg gtaccgacgg tgccggtgag cgtcatcgcc tcggcctcgt tgggcgagaa
     2221 cacgtcgcag agcccgatga actcacgcac gcccggggtg gcaaggtcgg cgccttcgcc
     2281 gttgcagtcg ccgaagatcc tgacgccggc cgatttggcg tcgcgcacga acgacagcca
     2341 ctcgggctcg ggccggaacg tctgcagcag ccatttcggc cgaagccggg tgacgacctc
     2401 ccggtcgggc gcccgcagcg ccgcctcgcg ataggtgatg aagccgcgct cgccgcggcc
     2461 ggagaaggcg gccgacaccc gctgcaggct gtgcccgaca tgccggaagc cggccggatc
     2521 gaggccgtct ccggccgccg cttcgagcac gaggcggctg aacatgtcgg tgccgaaatc
     2581 gcaggcccag gcggtgcgca cgtcgagccg ggtcagcccg agcgccatgt tgtagcagcc
     2641 gcccggacgc accgagaggc cgcgcgcgaa cgcctcgcca ccgagcgaag gcggcgcgtc
     2701 gaggccggaa aagatcatgt cgcagtaata ctcgccggcc accagcacgt cgatgcgctc
     2761 gctcatgccc agccctccgc ataggccgga taggcagcga ggaaatcgtc gaccagcggt
     2821 tcggcgcgcg aataggacag caccagcgga tgcgccacca aggcgtcgat cgccagcgcc
     2881 cggtccctgg tcaggatggc cttcgccgcc aggcgctcgt aatgcttgac gctgtggacg
     2941 aggctccctt gatcctccgg catcctgcca acgggcaccg gttgaatgcc gttctggtcg
     3001 acgatgcagc tcacctcgac cacgtcgtcg tcgtggaggt cggcgatggc gccgtggttg
     3061 acgacgttga gcccggtgcg gatgcggccc cggccttcga gcgcctccat caggctcagc
     3121 gccacgccgg catagccctc gccgtcgtcg gccggcgccg cctcctcgtc cgtgtcggcc
     3181 tcgatctggg tggcgtgcgc catgtagctg ccgctgcgcc ggtgctcgta gtcgaaatag
     3241 gccgcgagcg cggcgtccgg atggcgcgcc gcatcgatcc ggcgcagatc ggcgatcagc
     3301 tgccggttga gctcgagcac ttcctcgccc cgcgtcgggc cgttgccgtg cgccgccatc
     3361 gcctggtcga cgtagtggta atagtagagg tactcgttga tccacatgcc ctggcggcgg
     3421 accacgcgcg gctcgaacac ccgcaggttg gtgccggcga ggaaggcgtc atcggcgagc
     3481 gcctccggca gccggtcgac gccgtcgacc ttggcctgcc gcgtgaagct cagatggttg
     3541 agcccgaaca ggtcggcctc gaccgcctgc ggatcgatgc cgaggcggtg ggcgatggcg
     3601 ttctgcgcgc cattggcgct gtcgcagatg ccgacgcagc ggctgatgcc ggcatcgctg
     3661 agggcctggc tgaccagccc cgccggattg gtgaaattgt agagccaggc gtcgggtgcg
     3721 acctcgcgca gccggcgcgc atagctcaag atcgtcggaa tgctgcggaa cgccatggcg
     3781 aagccgcagg cgccggtggt ttcctgcccg agcacgccgt gcctgtgggc gatacgctcg
     3841 tcggtgatgc gcccctcggc gccccccggc cgcaccgtgg tcaccacgtg gtcgacgccg
     3901 gtgaacgcct cgtcggcgga agtcgtcgtg gtgatggcga cgcccgtccc ggcgcgccgc
     3961 gccagctcgg cgcagagcac cccgatcagc tgcagctgct cggcatcggt atccatcagg
     4021 cagatttcgg tgaggccgag ccggccggcg cgcttcagcg ccgactgcac gaacagcggc
     4081 gcccgtacgc cccctccgcc gatgatcgca agcttcattg cgacgcctcc cgccactggt
     4141 tatatccagt catatcgggt tagggtaggt caagactttc gcgttcggac cggaggcgcg
     4201 aacagctttt cgcgatttgc gcacgttcgg agcaggcgcg agcggcgggg gatgggcgtc
     4261 caatgaacca gatcagccgc gaggatgccc ggccgctcta caagcaggtg aaggaccgcc
     4321 tgctggaggt gctggccgat ggcagcgtgc cgccgatggg caagctggcg tccgagcgcg
     4381 aactggtcga gcactacggg gtgagccgca tcaccgtgcg gcaggcgatg cgcgaactcg
     4441 tcgccgaggg ccatctgcgc agccatccgg gcaagggctt ttacgccacc ggccgctcgt
     4501 cggcgcaggc cttcgagctg gaactgctgc gcagtttcac cgccactgcc gaacgtcacg
     4561 gcctgcgccc cggcagccgg ctgctgcacg gcaggctggt cgcggcggac gaccggctgg
     4621 cggcgagcct cgaggtctcg ccgggcgcgc cggtggtgtc gctgcgccgg ctgcgcctgc
     4681 tcgatgccca gcccgtcgcc atcgcgcagg actggattgc cgcggcattg gtgcccgggc
     4741 tcctcgacct cgactggcag cccggcaacc ggtcgctcta cagcgagctg cgcacccgct
     4801 acggcctcgt gccggaccgc ggcgaaacca tcctcgcggc ccggctggcg ctgagcgacg
     4861 aggcgcaatt gctggagctg gagcgccgcg ccgcggtgct caccgtcgag cagatcgcct
     4921 attcccgcga tggccgcccg atcaatgcga cgctctcggt gcaccatccc acccgctacc
     4981 cgctgcggct ggaacagagc ggacgctagg cgatatgctg cgg
//
LOCUS       DATAZA010000506         3353 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1469871, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000506 DATAZA010000000
VERSION     DATAZA010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3353
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1469871"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..350)
                     /locus_tag="VHZ56_12550"
     CDS             complement(<1..350)
                     /locus_tag="VHZ56_12550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298842.1"
                     /translation="MAEGLLAERPLGFWEGVGIDYAANELTILQILGKHEITQGQFNY
                     AKQQLGWTRRKTPQVNRQKIIRRLFRLLDRMLEKLETEMTNAGEKEVTVLGRLVQSMG
                     KLIEIEAATNTTTTA"
     gene            535..1023
                     /locus_tag="VHZ56_12555"
     CDS             535..1023
                     /locus_tag="VHZ56_12555"
                     /inference="COORDINATES: protein motif:HMM:NF014968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AprI/Inh family metalloprotease inhibitor"
                     /protein_id="HEX4298843.1"
                     /translation="MARQVAAALRIAAALLVFTTGPVLADDASSSAAALAAPAAGDNS
                     TVPDEFQNMVGDWSLAQQDDSLPKCPLTFTDQPSAGGWTVVIPDGCPAPYPAADQLAA
                     WTIDPADNSVELLDAKGNVTLKLFEDEDGLYDTDPSTDPRFYLLAPYEQNGNGGEDDD
                     AD"
     gene            complement(1020..1475)
                     /locus_tag="VHZ56_12560"
     CDS             complement(1020..1475)
                     /locus_tag="VHZ56_12560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HEX4298844.1"
                     /translation="MAFWDDKSLEQMSATEWEALCDGCGRCCLMKLEDEDTGEIYRSD
                     VRCRLLDGKTCRCTDYPNRQAKVKDCIKLTPENVRTIDWIPKSCAYRRIAEGRGLAWW
                     HPLVSGDPDTVRTAGISISGRTVAEGEVRPGTWEDHVADWPEWEPPERL"
     gene            1564..>3353
                     /locus_tag="VHZ56_12565"
     CDS             1564..>3353
                     /locus_tag="VHZ56_12565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HEX4298845.1"
                     /translation="MQDPFYHKEKRRKKARMLDADAWLDSALYEFWNSLGRGYRNVED
                     FFANFRVRGIRRLIVEILSDGATFLAIGAVLLLSLALPAFDAVQSGQFNKPEDISVTF
                     LDRYGNEVGRRGIRSDDSFPLDKLPDYFVKAAIATEDRRFYDHFGVDVVGTLRALVNN
                     AQGDNGTQGGSSITQQLAKNLFLSPERTVDRKIKEAYLAVWLEWHYSKDEILKMYFDR
                     AYMGGGNFGVAAAAEYYFGKKITDISLAEAAMLAGLFKAPTNYSPTVDLAAARARANQ
                     VLSNLVDAGFLTEGQVAAARRNPATPVDHTDDVNSPNYFLDWSFDQVRQIVADSKTTS
                     NSFVVRTTIDPVLQSYAEDAIASELRDGGQKYHVSEAAMVVAEPDGQVRAMVGGVDYG
                     QSQFNRAVAALRQPGSSFKAFVYSQAFESTSMTPTTRIDDRYVCIGDWCPRNFEGNLF
                     GNITLTQAFAESVNTAAVAVSIKTGRQPIADLAHKMGITSDFPVTRSLALGVAQVSVL
                     DMTSAYSVFASGGYKTPGYGILKVSTLRGDTIYQKDVNAPRPRVLSQQTVGYMDQMMR
                     AVVTGGTGVAAKIDGVPAVGKTGTTSDFRDA"
BASE COUNT          563 a         1145 c         1066 g          579 t
ORIGIN      
        1 gccgtggtcg tggtgttggt cgccgcctcg atctcgatga gcttgcccat cgactgcacg
       61 aggcgcccga gcaccgtcac ttctttttcg cctgcattgg tcatttcggt ttccagtttc
      121 tccagcatgc ggtcgagcag ccggaacagc cgcctgatga tcttctgccg gttgacctgc
      181 ggcgtctttc gccgggtcca gccgagctgc tgtttggcgt agttgaactg gccctgggtg
      241 atctcgtgct tgccgagaat ctgcaggatg gtcagttcgt tggcggcgta gtcgatgccg
      301 acgccctccc agaaacccag gggccgctcg gccagcaggc cctcggccat cgtcggtatc
      361 ctcgtggaag ggatcgtctg gcccatttct gcgaccgtag ccaaactata cccgcccagc
      421 gtgacgcggg gataagtcgg ccgaacaacc tgccaagtgc ttcatccgcc agcccttgcg
      481 gcgcaccgcc ggtgtctcct agtttcgccg aaacggccgc acggaggaca gcccatggca
      541 agacaggtcg cggcggcgct gcggatcgcc gccgctctgc tggttttcac caccggcccg
      601 gtgctggccg acgatgcatc ctcgtcggcg gcggcgctgg cggcaccggc ggcaggcgac
      661 aacagcacgg tgcccgacga attccagaac atggtcggcg actggtcgct ggcgcagcag
      721 gacgacagcc tgcccaagtg cccgctgacc ttcacggatc agcccagcgc cggcggctgg
      781 acggtcgtaa tccccgacgg ctgtccggcc ccctaccccg ccgccgacca attggcggcg
      841 tggacgatcg atccggccga caattcggtg gaactgctgg acgccaaggg caacgtgacg
      901 ctcaagctgt tcgaggacga ggacgggctc tacgacaccg accccagcac cgatccgcgc
      961 ttctacctgc tggcgcccta cgagcagaac ggcaatggcg gcgaagacga cgacgccgac
     1021 tagagccgct ccggcggttc ccattcgggc cagtcggcca cgtggtcttc ccaggtgccg
     1081 ggcctgacct cgccttcggc gacggtgcgg ccgctgatcg agatgccggc ggtgcgcact
     1141 gtatcgggat cgcccgagac cagcggatgc caccaggcca gcccgcggcc ctcggcgatg
     1201 cgccggtacg cgcagctctt ggggatccag tcgatggtgc gcacgttttc cggcgtcagc
     1261 ttgatgcagt ccttcacctt ggcctgccgg ttcgggtaat cggtgcagcg gcaggtcttg
     1321 ccgtcgagca ggcggcagcg cacgtccgag cggtagattt cgccggtgtc ctcgtcctcg
     1381 agcttcatca ggcagcagcg gccgcagccg tcgcagaggg cctcccattc ggtggccgac
     1441 atctgttcga gcgatttgtc gtcccaaaag gccatatgtt cgcctacgtt caaggggatt
     1501 tcacttgtcg tcggtagata ggctatccta ccacaaaatc cagacgaccc cccggagcgt
     1561 ccgttgcagg accccttcta ccacaaagaa aagcggcgca agaaagcccg gatgctcgac
     1621 gccgacgcct ggctcgactc ggcgctctat gagttctgga actcgctcgg ccgcggctac
     1681 cgcaacgtcg aggatttctt tgccaatttc cgggtccgcg gcatccgccg gctgatcgtc
     1741 gaaatcctct cggacggcgc gacgttcctg gccatcgggg cggtgctgct gctgtcgctg
     1801 gcgctgccgg cgttcgacgc cgtgcaatcc gggcagttca acaagcccga ggacatttcg
     1861 gtcactttcc tcgatcggta cggcaacgaa gtcgggcgcc gcggcatccg ctcggacgat
     1921 tccttcccgc tcgacaagct gccggattat ttcgtcaagg ccgcgatcgc caccgaggac
     1981 cggcgcttct acgaccattt cggcgtcgac gtggtcggca cgctgcgcgc gctggtcaac
     2041 aacgcgcagg gcgacaacgg cacgcagggc ggttcctcga tcacccagca gctggccaag
     2101 aacctcttcc tcagccccga gcgcaccgtc gaccgcaaga tcaaggaagc ctatctcgcc
     2161 gtctggctcg agtggcacta cagcaaggac gagatcctca agatgtactt cgaccgcgcc
     2221 tatatgggtg gcggcaattt cggcgtcgcg gcggcggcgg agtactattt cggcaagaaa
     2281 atcaccgaca tcagcctcgc cgaggcggcg atgctggccg gcctgttcaa ggcgccgacc
     2341 aattattcgc cgacggtcga cctcgctgcg gcgcgggccc gcgccaacca ggtgctgtcg
     2401 aacctggtcg acgccgggtt cctcaccgag gggcaggtcg cggcggcgcg ccgcaatccg
     2461 gcgacgcccg tcgaccacac cgacgacgtc aactcgccga actactttct cgactggagc
     2521 ttcgaccagg tccggcagat tgtcgccgac tccaagacca cctccaacag cttcgtggtg
     2581 cgtaccacga tcgatccggt gctgcagtcc tatgccgagg acgccatcgc ctccgagctg
     2641 cgcgacggcg gccagaaata ccacgtcagc gaggccgcca tggtggtcgc cgagcccgac
     2701 gggcaggttc gcgccatggt cggcggcgtc gactacgggc agagccagtt caaccgtgcg
     2761 gtggcggcgc tgcggcagcc cgggtcgtcg ttcaaggcct tcgtctattc gcaggcgttc
     2821 gaatcgacga gcatgacgcc gacgacgcgg atcgacgacc gctatgtctg catcggcgac
     2881 tggtgcccgc gcaatttcga gggcaatctg ttcggcaaca tcacgctgac gcaggcgttc
     2941 gcggagtcgg tcaataccgc cgcggtggcg gtctcgatca agaccggccg gcagccgatc
     3001 gcggacctcg cccacaagat gggcatcacc agcgacttcc cggtcacccg ctcgctggcg
     3061 ctcggcgtcg cccaggtcag cgtgctcgac atgacgtcgg cctattcggt gttcgccagt
     3121 ggcggctaca agacgccggg ctatggcatc ctcaaggtca gcacgctgcg cggcgacacc
     3181 atctaccaga aggacgtcaa cgcgccgcgg ccgcgcgtcc tcagccagca gacggtcggc
     3241 tacatggacc agatgatgcg cgccgtggtc accggcggca ccggcgtcgc ggcgaagatc
     3301 gacggcgtcc cggcggtcgg caagaccggc acgaccagcg atttccgcga cgc
//
LOCUS       DATAZA010000507         4656 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_78904, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000507 DATAZA010000000
VERSION     DATAZA010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4656
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78904"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..552
                     /locus_tag="VHZ56_12570"
     CDS             <1..552
                     /locus_tag="VHZ56_12570"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX4298846.1"
                     /translation="TEPDLTANNWEDSKGWIASGKGAMWFLGSWSINQIIDDGSKKAG
                     ISNYDPTNIGYFPLPYDNSGGPYNVDSGPDYPLAVAKNSKNPVTAEAWLAFMLTKSDL
                     SQVAGFIPGYKPMPPTLAQMSEFQSYKPNIIQTVADPTDFTTASNSINFGGGKGAQSL
                     MLADDYDAAITDLNKQWAGATGQ"
     gene            647..1594
                     /locus_tag="VHZ56_12575"
     CDS             647..1594
                     /locus_tag="VHZ56_12575"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX4298847.1"
                     /translation="MTDASVGTNARARTPFRFSSRTRRNIAIVTFLIVPIVSLVLFSI
                     YPVLQLLWISLTDFNSISWSRAKFVGVTNFVNLAGRDQRLLAPMVNSLYYLGGSLVQI
                     VLATWFAVTLNQKLPGSQLFRTILFLPFVLNAVAAALIFRHVLQLDGTLNDLLVALFG
                     PGAKFPWLDASKSYTNFSLAAASVWRYLGFNLVVTFGVLQSIPQDQYDAAKIEGANGW
                     QSFWRITFPSIRLVLLLQLMLSAVGSLEVFEIPQIITGGAGKTATFAINMIQTGFQFR
                     RAGVAAAMAVVMLVIVAIFYLLTRIVSKSAGMLREETRQ"
     gene            1591..2466
                     /locus_tag="VHZ56_12580"
     CDS             1591..2466
                     /locus_tag="VHZ56_12580"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX4298848.1"
                     /translation="MTRRKVRRRPLSPGRLAYRIFQYATLILFSGIVLLPLWSVLAGS
                     FKTALEYTNTPHAAPPANWLNFANYLDVIFPVTGLPIGWAFFNTVMVMVCSIALLVLF
                     GSMAAFAIDRFRFPGRWLLLAAYAAIVAVPGILTPVSTFQVLQVLGLANTRWALVALY
                     SGADIVSLLIFIQFLKGISTEIDDSARIEGAGYFQIFFRLILPIMAPAIATVTILRAV
                     YIYNDFVLPYLYAARASENTVSMMLFTFASVNSTVSQAVVMAAVILVIVPTLVAFFFL
                     QRFIYAGITNGSVKG"
     gene            2471..3541
                     /gene="ugpC"
                     /locus_tag="VHZ56_12585"
     CDS             2471..3541
                     /gene="ugpC"
                     /locus_tag="VHZ56_12585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003535873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HEX4298849.1"
                     /translation="MSFLRLEHVSKYFGEFQALKDISFEAEAGAFVVLLGPSGCGKST
                     LLRLITGLTEDHEGEIYIGGRRVTDLDPKDRKVAMVFQSYALYPHLTVRRNISFGMEI
                     NRFPRAERDRRVGEAARALQLEPLLDRLPAQLSGGQRQRVAIGRCLVREPDLFLFDEP
                     LSNLDAKLRHDTRVELKHLHQRLQATTVYVTHDQHEAMTLATMVVLLKDGEIVQIGSP
                     GELYAQPVNRFAATFIGSPAINLIKGDLTAAARFTGGGLDVQLPATPAATAPGGRAIE
                     LGLRSESARLATDAEAQQVIDVDYVELAGADLYVNGHAGGQEVVVRLERTARVAAGDR
                     LPVRWQLDQALIFDAATGKRLG"
     gene            3585..4556
                     /locus_tag="VHZ56_12590"
     CDS             3585..4556
                     /locus_tag="VHZ56_12590"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008927 - mannonate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006064 - glucuronate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HEX4298850.1"
                     /translation="MLRLAEFIDPTPNRVWKLAQQCGVTSAVGGLPSADLHGDERITD
                     LAPLTRMKQRYEDAGFVLEVIESRPPLNKAKRGLPGRDEEIDAVCALLENMGKLGIPV
                     WCYEWMTDFNWLRTDMATPSRGGSLVTSFDARNVPADLTPNPPIGEDELWASLDYFLR
                     RVLPVAERAGVVLSMHPDDPPTTPIRGVSRIMRSIPNFHRLLDTLPSPASTVTLCQGN
                     FTLMTDDLPREIRRLGKKISFVHFRDVRGVPEKFEETWHDAGMTDMLACMRAYRDIGF
                     DGVLRPDHVPTVEGDSNSAAGYSAFGRLYAIGYIRGLQQAVYAETAS"
BASE COUNT          780 a         1640 c         1395 g          841 t
ORIGIN      
        1 accgagcccg acctcaccgc caacaactgg gaagattcca agggctggat cgccagcggc
       61 aagggcgcca tgtggttcct gggcagctgg tcgatcaacc agatcatcga cgacggcagc
      121 aagaaggccg gcatctccaa ctacgacccg accaatatcg gctatttccc gctgccctat
      181 gacaacagcg gcgggccgta caatgtcgat tccgggccgg actatccgct ggcggtcgcc
      241 aagaactcga agaacccggt gacggccgag gcgtggctgg cgttcatgct gaccaagtcg
      301 gacctgagcc aggtcgcggg ctttatcccg ggctacaagc cgatgccgcc gacgctggcg
      361 cagatgagcg agttccagag ctacaagccc aacatcatcc agaccgtcgc cgacccgacc
      421 gacttcacca ctgcctccaa ctccatcaat ttcggtggcg gcaagggtgc gcaatcgctg
      481 atgctggccg acgattacga tgccgccatc accgacctca acaagcagtg ggccggcgcg
      541 accggccagt agtccagcgg ttccttcggg cacaaatggt gcggcgcagc agggttcttg
      601 cgccgcaccg tcgagttgcc tctaccatca gcggagcgcc gcaccgatga ccgatgccag
      661 cgtcgggacc aatgcccggg ccagaacgcc atttcgcttc agcagccgaa ctcggcgcaa
      721 catcgccatc gtcaccttcc tgattgttcc gatcgtcagc ctcgtgctgt tcagcatcta
      781 ccccgtgctg cagttgctgt ggatcagcct caccgatttc aactcgatca gctggagccg
      841 cgccaagttc gtcggggtca ccaacttcgt caatctcgcc ggccgcgacc agcggctgct
      901 cgcgccgatg gtgaacagcc tctactacct ggggggcagc ctggtgcaga tcgtgctcgc
      961 cacctggttt gccgtcacgc tcaaccagaa gctacccggc tcgcagctgt tccgcacgat
     1021 cctcttcctg ccattcgtcc tcaacgccgt agcggcggcg ctgatcttcc ggcacgtgct
     1081 gcagctcgac ggcaccctca acgatctgct ggtggcgttg ttcggaccgg gcgccaaatt
     1141 cccctggctc gatgcctcca agagctacac gaatttctcg ctcgccgcgg cgagcgtctg
     1201 gcgctatctc ggcttcaacc tcgtggtcac cttcggcgtg ctgcagtcga tcccgcagga
     1261 ccagtacgac gccgccaaga tcgaaggggc caacggctgg caaagcttct ggcgcatcac
     1321 ctttccctcg atccggctgg tgctgctgct ccagctcatg ctgtccgcgg tgggctcgct
     1381 cgaggtcttc gagattccgc agatcatcac cggcggcgcc ggcaagaccg cgaccttcgc
     1441 catcaacatg atccagaccg gcttccagtt tcgccgcgcc ggcgtcgccg cggcgatggc
     1501 cgtggtgatg ctggtcatcg tcgcgatctt ctaccttctc acccggatcg tctcgaaaag
     1561 cgccggcatg ctgcgcgagg agacccgaca gtgacccgcc gcaaggtccg ccgccggcca
     1621 ctgtcgccgg gccggcttgc ctaccgtatc ttccagtacg cgaccctgat cctgttctcg
     1681 gggatcgtct tgctgccgct ctggagcgtc cttgccggct cgttcaagac cgcgctcgaa
     1741 tacaccaaca cgccgcacgc ggcaccgccc gccaactggc tgaacttcgc caattatctc
     1801 gacgtcattt tccctgtcac cgggctgccg atcggctggg cgttcttcaa caccgtgatg
     1861 gtgatggtgt gctcgatcgc gcttctggtg ctcttcggca gcatggccgc cttcgccatc
     1921 gaccgcttcc gcttccccgg ccgctggctg ctgctcgcgg cctatgcggc catcgtcgcc
     1981 gtgcccggca tcctgacgcc ggtctcgacc ttccaggtgc tgcaggtcct cgggctcgcc
     2041 aacacccgct gggctctggt ggcgctgtac tcgggcgccg atatcgtctc gctgctgatc
     2101 ttcatccagt tcctcaaggg catctcgacc gagatcgacg acagcgcgcg catcgagggg
     2161 gccggctact ttcagatctt cttccgcctc atcctgccga tcatggcgcc ggccatcgcg
     2221 accgtcacca ttctgcgcgc ggtttacatc tacaatgact tcgtgctgcc ctatctctat
     2281 gccgcacgag cctcggagaa caccgtatcg atgatgctgt tcacctttgc ctcggtcaat
     2341 tcgacggtgt cgcaagcggt ggtcatggca gcggtgatcc tggtcatcgt gccgacactg
     2401 gtcgcgttct tcttcctgca gcgcttcatc tatgccggca tcaccaacgg ctcggtcaaa
     2461 ggctaataga atgtcgtttc ttcggctcga gcacgtgtcg aaatatttcg gtgagttcca
     2521 ggcgctcaag gacatcagct tcgaagccga ggccggcgcc ttcgtcgtgc tgctcggccc
     2581 gtcgggctgc ggcaagtcga ccctgttgcg gctcatcacc ggcctcaccg aagaccatga
     2641 gggcgaaatc tacatcggcg gccgccgcgt caccgacctc gaccccaagg accgcaaggt
     2701 cgccatggtg ttccagtcct acgcgctgta cccgcacctc accgtgcgcc ggaacatcag
     2761 cttcggcatg gaaatcaacc gctttccccg cgccgagcgc gaccggcggg tgggcgaggc
     2821 cgctcgcgcc ctgcagctcg agccgctgct cgaccggttg ccggcgcagc tgtccggcgg
     2881 ccagcgccag cgcgtcgcca tcggccgctg cctcgtgcgc gaaccggacc tgtttctgtt
     2941 cgacgagccg ctcagcaatc tcgacgccaa gctccggcac gacacccgtg tcgagctcaa
     3001 gcatctgcat caacggttgc aggcgacgac cgtctacgtc acccatgacc agcacgaggc
     3061 gatgacgctg gcgacgatgg tggtgctgct caaggacggc gagatcgtcc agatcggctc
     3121 gcccggcgag ctctatgcgc agccggtcaa ccgcttcgcc gcgaccttca tcggctcgcc
     3181 ggcgatcaat ctcatcaagg gcgacctcac tgctgcggcg cgcttcaccg gcggcgggct
     3241 cgacgtccag ctgcccgcga ccccggcggc caccgccccc ggggggcgtg ccatcgagtt
     3301 ggggcttcgc tccgagagcg ccaggctggc tacggatgcc gaggcccagc aggtgatcga
     3361 cgttgactat gtcgagctcg ccggggccga tctctacgtc aacggccacg ccggcggaca
     3421 ggaggtcgtc gtccgactgg agcgcacggc ccgtgtcgcc gccggggacc ggcttccggt
     3481 ccgctggcag ctggatcagg cgctgatctt cgacgcagcg accggcaagc ggctcggcta
     3541 agctcgaaac gagaccaccg acagtttcca acttcaggcg ctccatgctc agactggccg
     3601 aattcatcga tcccaccccc aaccgcgtgt ggaaactggc gcagcaatgc ggggtcacca
     3661 gcgcggtcgg cggattgccg tctgctgacc tgcacggcga cgaacggatt accgacctcg
     3721 caccgctgac ccggatgaag cagcgctacg aggacgccgg cttcgtgctc gaagtgatcg
     3781 agtcgcggcc gcccctcaat aaggccaagc gcggcctgcc cggtcgggac gaggagatcg
     3841 acgcggtctg cgccctgctc gagaatatgg gaaagctcgg cattccggtg tggtgctacg
     3901 agtggatgac tgatttcaac tggctgcgca ccgacatggc cacgccttcg cgcggcggct
     3961 cgctggtgac cagcttcgat gcccggaacg tgccggccga cctgaccccg aacccgccga
     4021 tcggcgagga tgagctgtgg gccagcctcg actacttcct ccgccgcgtg cttccggtcg
     4081 ccgaacgggc gggggtcgtg ctctcgatgc atccggacga tccaccgacc accccgatcc
     4141 ggggcgtcag ccggatcatg cgaagcatcc ccaacttcca tcggctgctc gacacgctgc
     4201 cgagccccgc cagcaccgtc acgctgtgcc agggcaattt caccctgatg accgacgacc
     4261 tgccgcgcga gatcaggcgg ctgggcaaga aaatctcctt cgtgcatttc cgtgacgtgc
     4321 gcggcgtacc ggaaaagttc gaggaaacct ggcacgacgc gggcatgacc gacatgctcg
     4381 cctgcatgcg cgcctatcga gacatcggct tcgacggcgt cctgcggccc gaccacgtgc
     4441 cgaccgtcga gggcgacagc aacagcgcgg cgggctactc ggcgttcgga cgcctctacg
     4501 ccatcggcta tatcaggggc ctgcagcagg ccgtctatgc ggagactgcc tcatgaggct
     4561 cgcgatcacc ggcggcaacg gcatcgtcgg cagcgccatc gtcgaagcgg cgctggcccg
     4621 cggcgaccag atcgtcaaca tcgaccgcgt cgctcc
//
LOCUS       DATAZA010000508         7328 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_775014, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000508 DATAZA010000000
VERSION     DATAZA010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 7328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7328
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_775014"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            220..309
                     /locus_tag="VHZ56_12595"
     tRNA            220..309
                     /locus_tag="VHZ56_12595"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:254..256,aa:Ser,seq:cga)
     gene            578..1312
                     /locus_tag="VHZ56_12600"
     CDS             578..1312
                     /locus_tag="VHZ56_12600"
                     /inference="COORDINATES: protein motif:HMM:NF024700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX4298851.1"
                     /translation="MTFSAFGSFQPVSNQRDRSSAVLFSYVGLKRIGTSTTGKPLPPK
                     TPEQLSVEFGDSVLLCRQGARTDRWRRALETLEADPIFRDAEIASLASVEGDDELKAA
                     AKTLFQRLSSGHKIVLLTVTRLVQSVEEKTLVLIDEPEAHLHPPLLAAFVRALSDLLI
                     NRNGVAIIAKHSPVVLQEVPRSCVWKIRRAGSRVVAERSDIETFGENVGVLTREVLGL
                     EVTRSGFHKMLRDAVAETPDFDAIVE"
     gene            1736..2200
                     /locus_tag="VHZ56_12605"
     CDS             1736..2200
                     /locus_tag="VHZ56_12605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298852.1"
                     /translation="MAPLNLVPACSDCNKAKSGGFPHIEEEVGLHPYYDDIDGERWLV
                     AEVVETAPAAARYGVDAPQAWSDLLSARVGNHFVLLGLASLYASEAADELLNIRHLLG
                     IALATGGPEAVRQELEVRAESAAAGRRNGWRSAAYVAWAVSDWFCQGGFAVP"
     gene            complement(2227..2634)
                     /locus_tag="VHZ56_12610"
     CDS             complement(2227..2634)
                     /locus_tag="VHZ56_12610"
                     /inference="COORDINATES: protein motif:HMM:NF023420.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3489 domain-containing protein"
                     /protein_id="HEX4298853.1"
                     /translation="MDYRIPVSMVGTAAPGELPGLVVEAEYSRIGSPTRRPPNGKDLD
                     QNQRRAHAQGAQAKAAVQPAPKTETKQALVLAMLRRQDGASIAEIVDATDWQPHSARA
                     FLTGAVKKRLEITLISEKGEDGIRRYYVVPLAP"
     gene            complement(3252..4283)
                     /locus_tag="VHZ56_12615"
     CDS             complement(3252..4283)
                     /locus_tag="VHZ56_12615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298854.1"
                     /translation="MSESNIVPLAGRHAAAEATRTREADEAAVWRVVEEEGIAIWSQD
                     AERLSTFHVQEPHRQWWGWQASTGLTILGNWDRVRRGLEEHFLNWPEPNWFLLGNRRF
                     ENKTIRIVGEVAWVTFEEVCDTDDLPGYVGPGGGTAIFHLLERHEGQWKIAFSTVMDE
                     QFGQTDTPLWQIDRAGRVVRRNAAAASLLRAPESDVAMVNGHLRMRDPGNDRRLEQTI
                     GRVVEPPGCMFVGGEAAPIVCDPGDDTPVRVWWVISRSGKLFVAFNDPGLLRGRIEMA
                     ARAFGLSPAQQRLTTSIASGLALPEVAKREGVRVSTARTQLKRIYDKVGVRGQPALVQ
                     AMLNAANPA"
     gene            complement(4280..4600)
                     /locus_tag="VHZ56_12620"
     CDS             complement(4280..4600)
                     /locus_tag="VHZ56_12620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298855.1"
                     /translation="MPRAMADDAGLAIVAAEGVMGLNTDPELRAAVIQRAWLVAMSGA
                     FADTDEVESRLVALGYREAARWLRDPELRQAMDRVCTASRVAFLTKAPRQVASDGAKG
                     QVRS"
     gene            4864..5364
                     /locus_tag="VHZ56_12625"
     CDS             4864..5364
                     /locus_tag="VHZ56_12625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015315580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298856.1"
                     /translation="MSSFAGGLGCLSFLLLAGVAQTALAVDNPLTDQVRTADARFTDV
                     KQAVAEGYAPIPCADDGAGGSMGVHFASGDRVKADDIDINKPQAILYEPEADGSLKLM
                     AVEYFTTKGPANLGGHLFNYIPAPNRWGLPAIFELHVWAWMKNPAGDNADFNMDASCA
                     AMTPPK"
     gene            5477..5845
                     /gene="copC"
                     /locus_tag="VHZ56_12630"
     CDS             5477..5845
                     /gene="copC"
                     /locus_tag="VHZ56_12630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_process: GO:0006825 - copper ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis periplasmic binding protein
                     CopC"
                     /protein_id="HEX4298857.1"
                     /translation="MPHPLRTAAVAALLLGATMLPAAAHAHLVSATPAADASARAVTA
                     LVLHFTEVVEPAFTGVVLKTAAGAIVGTGAAKAEAADPTTIDVPIPAPLAPGRYEVDW
                     HALAVDGHKTTGTYAFTVTP"
     gene            5842..6711
                     /gene="copD"
                     /locus_tag="VHZ56_12635"
     CDS             5842..6711
                     /gene="copD"
                     /locus_tag="VHZ56_12635"
                     /inference="COORDINATES: protein motif:HMM:NF033808.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006825 - copper ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis membrane protein CopD"
                     /protein_id="HEX4298858.1"
                     /translation="MTPDVLLLALRFLRYGLAMLLWGAGLYATLVVPAGLGIRLRTRI
                     ADLPVLAAVALVTVVALRLPLMAASFATGWPDALRPDVLAAVLQTWTGTGWIVEAVLA
                     VFLVAAAGSPRLRWRITTPLAGLLLATSVMTGHAAIGAGVLGPLHQLLDAAHLLAAGF
                     WLGALPPLALMLKDEGASPDAVRAIERFGTAGQAAVAVVLLTGITNALLVKRGVPLSW
                     SSTYDILLLLKITVVLGMTGLAAYNRLGLLPRLAIGSNNAARTLRRTALLEAALGLTA
                     VGLVSVFGTLDTA"
BASE COUNT         1203 a         2518 c         2238 g         1369 t
ORIGIN      
        1 gggatagtgc acggcgcgat atcccggagc ctgtgcgacc agcatcgcgt cgcggttcag
       61 cggccgcgcc aggaccgccg cgagcaggtc gggatcgcgc agcgtgccat agacgaaaag
      121 caggtcgggc atcggggcac cggttgcggg cgccctgctg ctatgccata agcccgcgcg
      181 tgtcgaccag ccgccgccgc gcggccgttc tcatctcgcg gagaggtggc agagtggtcg
      241 aatgcaccgc actcgaaatg cggcgtgggg gcaactccac cgggggttcg aatccctccc
      301 tctccgccat ttccgctgca cccagcacct cgcaaagtgc tgctatgtcc gcgtagcagc
      361 ggcactattg cgtagggctt ccgggccctt ggcggagagt gcgggagcga ctttccgacg
      421 gtagcagcac aagtgcccga aacccgggcg acacacgccg cgacgaaccg tctgtccgac
      481 cgtctgtcca ttgaccgagg tcttaaccgc ctttggggaa gcgctggact aagcggacga
      541 gaattcaaac gaggagatct tcacgtatct ggtttcggtg accttcagcg cgttcggctc
      601 cttccaaccg gtgtcgaacc agcgggatcg atcttccgct gtccttttct cgtatgtcgg
      661 tctcaaacgc atcggcacgt ctacgaccgg aaagccgctt ccccccaaga cacccgagca
      721 gttgtcggta gagtttggtg acagcgtttt gctctgccgc cagggagcac gaacggatcg
      781 gtggcgaaga gccctggaaa ccctggaggc cgatccgatc ttcagggatg ccgagattgc
      841 gagcctggcg tcggtcgagg gagacgatga gttgaaggcg gctgcgaaga cgctctttca
      901 gcgcctgagc tccgggcaca aaattgtcct tctcacggtc actcgactgg tccagtccgt
      961 ggaggaaaag actctcgtac tcatcgatga gcctgaggcg cacctccatc ctccgctgct
     1021 ggccgccttt gtgcgggcgc tctcggattt gctgatcaac cgtaacggcg tagctatcat
     1081 cgccaagcac tcgcctgtcg tgctgcaaga agtgccgcgc agctgcgttt ggaaaatccg
     1141 acgcgccggt agccgcgtgg ttgccgaaag atcggacatc gaaactttcg gtgagaatgt
     1201 cggtgtgctg actcgcgagg tactcggcct cgaagtgact cgatccggct ttcataagat
     1261 gcttcgggat gccgtggccg agacgccaga tttcgatgcg atcgtcgagt agtttggagg
     1321 cgaactaggc ggcgaagcgc gggccgtggt tcgggcgctt cttgcagcac gcgatcaggg
     1381 tgagactggc caatagtatg ctcaagctcg atcgaccggg ctatggtgcg gatgaaacct
     1441 tcaccgcctg catctcgagg gttaggaatc ccggcctcaa agaacgcctc acggcggtga
     1501 cgcagtggat cgccgatgag tccgcagctt tcggctctgc cgctcagaat ggcgttctgc
     1561 atcactttcc gagaacggtg ctaccgaacg tcagcaccga agagatggaa agggtctata
     1621 cgtcacgcat ggcaaaggaa aatgctcccg gacgtgccat ctatgatgac atcttcgagg
     1681 cagcattgcg acgcttgacc atcatcttcc aaaggcattc ttcccggctc tggccgtggc
     1741 tccgctcaat ctggttccag cgtgtagtga ctgcaacaag gccaagagcg ggggctttcc
     1801 ccacatcgag gaagaggtag ggctacatcc ctactacgac gacatcgacg gcgagcgttg
     1861 gttggtcgcg gaggtggtcg agacagcgcc ggctgcagcc cgctatggcg tcgacgcacc
     1921 tcaggcgtgg agcgacctct tgagtgcgcg cgtcggcaac cactttgtgc ttcttggcct
     1981 cgccagcctc tacgcgtccg aagcggcgga cgaacttctc aatattcggc acctgctagg
     2041 cattgctttg gcgaccggcg gtccagaggc cgttcgccaa gagctggagg tgcgcgcgga
     2101 aagcgccgcg gccggacgac gaaacggatg gcgctcggcc gcctacgtgg cttgggctgt
     2161 cagcgattgg ttttgtcagg gtggcttcgc ggtcccataa cgcgaactga ctccatgcct
     2221 gacgccctat ggcgcaaggg gcacgacgta gtatctgcgg atgccgtcct cacccttctc
     2281 ggagatgaga gtaatttcca atcgtttctt gaccgccccc gtcaggaacg cgcgcgccga
     2341 atggggttgc cagtccgtgg cgtcgacgat ttcggcaatg ctggccccgt cctggcgccg
     2401 aagcatggcg agaaccaaag cctgcttggt ctcggtcttg ggcgcgggct gaactgcggc
     2461 tttggcttgc gcgccttgcg cgtgcgcgcg gcgttggttt tggtcgaggt ctttgccatt
     2521 tggcggtctc cttgtcggtg atccgatgcg ggaatactcg gcttcaacaa caaggcccgg
     2581 tagttctccg ggcgccgcgg tgccaaccat gcttaccggg atgcgatagt ccaatctttc
     2641 cgccgcgaag cagcgttaaa gaagcctgtg ccgatcgagg tcccgtggta ttttgcggtt
     2701 cggcttttcg agggccgccg ctttgtcccg cgctagataa ccgaccagca ccaggcccgt
     2761 gcagcacgat gaggtcccgg agggctatga gggctgcagg gtcctccccg gctgtgaggc
     2821 tgtgaggggg gcggcagtga ggcgccagct gcggactatc tgggctatgc tgtccatacc
     2881 tcgccgcgcc atccacgcta accctgcgca gccgccgtcc aatcgcaccg cgccacccct
     2941 ttcgcccgat ggacattggg gggacctccc ccggagaggc ccaaactccg cgacttgcga
     3001 gagcatggcc cgatgctgtc gctcggccgg tggcggcctc gtttcccgca gcgagtagcc
     3061 tcagggagcg ccgggcatca tcggaacgct gtgccttcga aaatccatca gcaggcaacc
     3121 tcaaactgga tcgccaactc gcgcgaaggt cgtaggcctg tttgtcgcga aatcgcctcg
     3181 gcgatttggg ggatgtccgc cgcgcggcaa caggagcact tgcgagtcca gctcggagcc
     3241 agaaaagggc cctaagccgg gttggccgcg ttgagcatcg cttgcaccag tgccggctgc
     3301 ccgcggaccc cgaccttgtc gtaaatccgc ttaagctggg tccgtgccgt gctcacccgc
     3361 acgccctcgc gcttggcgac ctccggtagc gcgaggccgc tggcgatcga ggtggtcagc
     3421 cgctgctgcg ccggcgacag cccgaaggcc cgcgccgcca tttcgatccg gccgcgcagc
     3481 agtcccggat cgttgaacgc gacgaagagc tttcccgatc gggagatgac ccaccacacc
     3541 cgcaccggag tgtcgtcgcc cggatcgcag acgatcggtg ccgcttcgcc gcccacgaac
     3601 atgcagccgg gcggctcgac tacccggcct atcgtctgct ccagccgtcg atcgttgccc
     3661 ggatcgcgca tcctgaggtg cccattgacc atcgccacgt cgctctcggg agctcgcagg
     3721 aggctcgccg ccgccgcatt gcggcgcacc acgcggccgg cgcggtcgat ctgccagagc
     3781 ggcgtgtccg tctgcccgaa ctgctcgtcc atcacggtgc tgaaggcgat tttccactgc
     3841 ccctcgtgtc gctcgagcag atggaagatc gccgtccctc cgcctggtcc gacatagccg
     3901 ggcaaatcgt cggtgtcaca gacctcctca aacgtgaccc acgccacttc accgacaatg
     3961 cggatcgtct tgttctcgaa gcggcggttg ccgagcagga accagttcgg ttccggccaa
     4021 ttgaggaaat gttcctcgag gccgcgtcgg acccggtccc agttgcccag gattgtgagg
     4081 cccgtcgagg cctgccagcc ccaccattgg cgatggggtt cctgtacatg aaacgtgctg
     4141 aggcgttcgg catcctggct ccagatggcg atgccctcct cctcgaccac ccgccacact
     4201 gccgcctcat cggcttcgcg cgtcctcgtc gcctcagcgg ccgcatgccg ccctgccagc
     4261 ggcacgatgt tggactcgct catgatcgga cttggccctt ggccccgtca ctggccacct
     4321 gcctcggtgc cttggtaaga aaggccacgc ggcttgccgt gcacacccga tccatcgcct
     4381 gtcgcagctc gggatccctc agccaccgcg ccgcctcgcg atagccgagc gccaccaggc
     4441 ggctctccac ctcgtcggtg tcggcgaagg cgccgctcat ggctaccagc caggcgcgct
     4501 gaatgactgc ggcccgcagt tccggatcgg tgttcagtcc cataaccccc tccgccgcca
     4561 cgatcgccag accggcatca tccgccatcg cgcgcggcac cgcaatcagt ccacctcgca
     4621 cagagcgggg gcggagagtg tgccacccag caacgccccg gtctgtcccc caatcgaggg
     4681 acaaggcaaa ggcggccaag ccaccggata cgagcaaata cgtatcgccc catgctgtcc
     4741 ccagaagtgg tgacagcgcc tctgctcctt ccgtgccacc gtccccccgt cgacgtcgag
     4801 gtcctcggcc ctgtcgcagg cgatcctcgt cgctcgacca tcattcggga gatcgttatg
     4861 cgcatgtcct cttttgcggg tggccttggc tgcctgtcgt ttctgctgct cgccggtgtc
     4921 gctcagaccg cgctcgccgt tgacaaccca ctcaccgatc aggtccgcac cgccgatgcc
     4981 cgctttaccg acgtcaaaca ggcggtcgcg gaaggttacg cgcccattcc ctgcgccgac
     5041 gacggtgccg gcggctcgat gggtgtccac ttcgccagcg gcgaccgggt caaggccgac
     5101 gacatcgaca tcaacaagcc gcaggcgatc ctctacgaac ccgaggccga cggcagcctc
     5161 aaattgatgg cggtcgaata cttcaccacc aagggcccgg ccaatctcgg gggacatctg
     5221 ttcaactaca tcccggcgcc gaaccgctgg ggcctgccag ccatcttcga gctccacgtc
     5281 tgggcctgga tgaagaaccc ggccggcgac aatgccgact tcaacatgga tgcctcgtgc
     5341 gcggcgatga ccccgcccaa gtaatagatc gatattccag agatcaccac cgagctttcg
     5401 ccctggcgga tgtaagaggg acgccgtatg tcccaacggc ggcgttcctc tccccgcgtc
     5461 tctccgtgag ccgatcatgc cacaccctct tcgcaccgct gccgtcgcgg ctctgctcct
     5521 cggcgccact atgctccccg ccgccgccca cgcgcatctc gtaagcgcaa cgcccgccgc
     5581 cgacgcgtcc gcgcgcgccg tcaccgcgct cgtcctccac ttcaccgaag ttgtcgagcc
     5641 ggccttcacc ggcgtggtcc tcaagaccgc cgctggcgcc attgtcggca ctggcgccgc
     5701 taaagcagaa gccgccgatc ccaccacaat cgacgtgccg atccccgcgc ccctcgcccc
     5761 cggccgctac gaggtcgatt ggcatgccct cgctgtcgac ggtcacaaga ccaccggcac
     5821 ctacgccttc accgtgaccc cgtgaccccc gatgtccttc tcctggccct gcgcttcctg
     5881 cgctacggcc tcgccatgct gctctggggc gccggcctct acgccaccct cgtcgtgcca
     5941 gccggcctcg gcatccgcct gcgcacccgg attgccgatc tcccggttct tgccgccgtg
     6001 gctctcgtca ccgtcgttgc actgcgcctg ccgctgatgg ccgcgagctt cgccaccggc
     6061 tggccagacg cccttcggcc cgacgtgctg gccgccgttc ttcagacctg gactggcacc
     6121 ggctggatcg ttgaggctgt tctggcggtc ttcctcgttg cagccgccgg gtctccccgc
     6181 ctccgctggc gcatcacgac gccgctcgcc gggctgctcc tcgccacctc ggtgatgacc
     6241 ggccacgcgg cgatcggcgc cggtgtcctg ggtccgcttc accagctgct cgacgccgcg
     6301 cacctgctcg ccgccggctt ctggctcggc gccctgccgc cgctcgccct gatgctcaag
     6361 gacgaaggcg ccagccctga cgccgttcgc gccatcgagc gtttcggcac cgccggccag
     6421 gccgcggtcg cggtcgtcct gctcaccggc atcaccaacg ccctcctcgt caagcgcggc
     6481 gtcccgctca gctggtcatc gacctacgac atcctgctgc ttctcaagat caccgtcgtc
     6541 ctcggcatga ctggccttgc cgcctacaat cgcctcggcc tcctgccgcg cctggctatc
     6601 ggctccaata atgccgcccg cactctccgc cgcaccgcgc tgctggaggc ggcgctcggt
     6661 ctgacggcgg tagggttggt cagtgtcttc ggcacgctcg acaccgcctg agtatcaagc
     6721 tgctgcgatt atcggagggg acgccgccat ggctaacgtc cacttcgggc cagacatgtg
     6781 tcaggcgatg atcggcgcgt ggtgcgcgca gtctgttcga taaagaagat gtcggtttcc
     6841 aatttcccgc cgatttgcgg gcgtccgctt tgtcccacca ctacgggggc cgcggcaggg
     6901 ccgcgattgc ccccacaatg gcggacgggc gggatgatca atcagcacca taaagtaggg
     6961 tagctgctga cagaccgggg ccgggtcggc cattatcgcc cttacagcct gggaggaccc
     7021 tgcagccctt atcgcccttc gagtcgtcat cgtgctggag aggcctggtg caggactgtc
     7081 cgacgtggtg cgcgcggaga tcgagttgcc gcagccaagg atgacagttg tctcgtccag
     7141 cccatggtcc gcacggcgac cttgtggtcg ggcaacagtg tgctgctcgt gctctgtctc
     7201 agaagaacag cgtttgcatg cctaggcgaa gaatcggcta gagagctcag ggaacgctct
     7261 caagagagac ttcgtcgtcg atcggcgcca tctgcccata cctgcaactc gtgctatgtg
     7321 atcacctc
//
LOCUS       DATAZA010000509         3315 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_79501, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000509 DATAZA010000000
VERSION     DATAZA010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3315
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79501"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..665)
                     /locus_tag="VHZ56_12640"
     CDS             complement(<1..665)
                     /locus_tag="VHZ56_12640"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEX4298859.1"
                     /translation="MFVVGGESLIDLISKPVAPDGTRELVAKAGGSPMNCAIALSKLG
                     NDAGFLCPISTDTFGDFILKPLLGAGVRQLIAQRVREPSTLAVVTDDGKGNPRYAFYR
                     EADRAFTRDGLIAALPQQLELFQIGGFCTIEPADMAVWLEVAREAARRGATISSDPNL
                     RPSLIADMDAYRKRVMASLELVSLVKMSEEDLAYLDAGKSIEQHAREILARPNCRLLV
                     VTLG"
     gene            846..2861
                     /locus_tag="VHZ56_12645"
     CDS             846..2861
                     /locus_tag="VHZ56_12645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX4298860.1"
                     /translation="MATQQKLRWGIIGPGAIARDFRDGVKDSRLGTLVAIATRNPQKP
                     GLGEQFPGARIHSGYDAILKDPEVDAIYIATPHPGHAEWAIKAAEAGKHVLVEKPFAL
                     SAFEADAVFNAHRRAGTFAAEAFMYRLHPLTRKIGELVGSGAIGDVRMIQASFGFQMP
                     AFRADHRLFANDLAGGGILDVGGYPVSMSRFIAGAAAGKPFLDPVKVAGTAHLGKEGT
                     DEWSAAVLQFETGVLAQVSCAVFVQLENVLRIMGATGRIEVQDFWFAGGNRAGGPGTI
                     RIIRPDGAVESIDTGKGLPHLYSFEADGAAEAILAGRQELAAPGMSWADSLGNARVLD
                     AWRAGAGLEYNIEKSSRRTLTLKGTPLRHDGSRIAKRSIPGLKKQASVVATGFEDFRT
                     FSSAAILLDGFFEAGGNLYDTAFVYGAGATEKLFGEWHTNRGVREDVVVIGKGAHTPL
                     CYPDAIGKQLTQSLDRLQTDYVDIYFMHRDNLDVPVGEFVDAMDAEVRKGRIRGIFGG
                     SNWSRERMDEAIAYAGRTGKQAPGALSNNFALAEMIKPIWAGCIAASDDAYKAWLVEH
                     QIPNFSWSSQGRGFFTDRAGRDKRDNAELVDTWYSEGNFARRDRAIELGRQLGASPIH
                     IALAYVLAQPFPSIPLIGPRRLEELDDSIKALSIRLTPEQVRWLEHG"
     gene            3002..>3315
                     /locus_tag="VHZ56_12650"
     CDS             3002..>3315
                     /locus_tag="VHZ56_12650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298861.1"
                     /translation="MKLSTLLLGAAAIGLLATSVGYADDYVNGAVKSAMVGGKEILTD
                     AKGMTLYTWDKDTAGVSNCYDQCATNWPPAMASADAKASGDFTLVARKDGSNMWAYKG
                     LPL"
BASE COUNT          569 a         1203 c         1036 g          507 t
ORIGIN      
        1 cccagcgtca ccaccagcag ccggcagttc ggcctcgcga gaatctcgcg cgcgtgctgc
       61 tcgatgctct tgccggcatc gagataagcc aggtcctctt ccgacatctt caccaggctg
      121 accagctcca gcgacgccat cacccgcttg cggtaggcat ccatgtccgc gatcagcgac
      181 ggccgcaggt tggggtcgga cgagatcgtc gccccgcgtc gcgctgcctc ccgcgccacc
      241 tcgagccaca ccgccatgtc cgccggctcg atggtgcaga agccgccgat ctggaacagc
      301 tcgagctgct gcggcagcgc cgcgatcagc ccgtcgcgcg tgaaggcgcg gtccgcttcg
      361 cggtagaacg cataacgcgg gttgcccttg ccgtcgtccg tcaccaccgc cagcgtcgag
      421 ggttcgcgca cccgctgcgc gatgagctgc ctcacccccg cccccagcag cggcttcagg
      481 atgaaatcgc cgaacgtgtc ggtgctgatc gggcagagaa agccggcgtc gttgccgagc
      541 ttgctcagcg caatggcgca gttcatcggc gacccgccgg ccttggccac cagctcgcgc
      601 gtgccatccg gcgccaccgg cttgctgatg agatcgatca ggctttcgcc gccgacaacg
      661 aacatgagcg cccccgaaaa ctgcctctgg ttacaatgcc cgaccgttcg attccagacg
      721 ctgcgattcg tccggctctc cgcgcgagta aatatttact gaatattgca gcgcggcgtg
      781 ccctcggcta acactggcgc ccaacaggga acgcggtgtg aaaccgcgca tcaggagctt
      841 accaaatggc gacgcagcag aaactgcgct ggggcatcat cggccccggc gccatcgccc
      901 gcgacttccg cgacggggtc aaggattcgc ggctcggaac gctggtcgcc atcgccacgc
      961 gcaatccgca gaagcccggc ctcggcgagc agtttcccgg ggcccgcatc cattcgggct
     1021 acgacgcgat actgaaggac ccggaagtcg acgcgatcta catcgcgacg ccgcatcccg
     1081 gtcatgccga atgggccatc aaggcggccg aggccggcaa gcacgtgctg gtcgaaaagc
     1141 cgttcgcgct gagcgccttc gaggccgacg cggtgttcaa cgcccaccgc agggccggca
     1201 ccttcgccgc cgaggccttc atgtaccggc tgcatccgct gaccagaaag atcggcgagc
     1261 tcgtcgggtc cggcgccatc ggcgacgtgc gcatgatcca ggccagcttc ggcttccaga
     1321 tgccggcatt cagggcggac caccgtctgt tcgccaacga tctcgcaggc ggcggcatcc
     1381 tcgacgtcgg cggctacccg gtctcgatgt cgcgcttcat cgccggcgcc gccgcgggca
     1441 agccgttcct cgatcccgtc aaggtcgcgg gtacggcgca cctcggcaag gaaggcacgg
     1501 acgaatggtc cgccgcggtg ctccagttcg agaccggcgt cctcgcacag gtgagctgcg
     1561 ccgtcttcgt gcagctcgag aatgtgctgc gcatcatggg cgccaccggc cgcatcgagg
     1621 tgcaggattt ctggttcgcg ggcggcaatc gcgccggcgg gccggggacc atccgcatca
     1681 tccgcccgga tggcgcggtg gagagcatcg acaccggcaa gggcctgccg cacctctatt
     1741 ccttcgaggc cgacggcgcc gccgaggcga tcctcgccgg ccgccaggaa ctggccgccc
     1801 cagggatgag ctgggccgac agcctcggca acgcccgcgt gctcgatgcg tggcgggccg
     1861 gcgccggcct cgaatacaac atcgagaagt cgtcccgccg caccctcacg ctgaagggca
     1921 cgccgctccg ccacgacggc agccggatcg ccaagcgcag cattccgggc ctcaagaagc
     1981 aggcctcggt ggtcgccacc ggctttgagg atttccgcac cttttccagc gccgccatcc
     2041 tgctggacgg cttcttcgag gccggcggca acctctacga cacggcgttc gtctatggcg
     2101 ccggcgccac cgagaaactg ttcggcgagt ggcacaccaa tcgcggcgtg cgcgaggacg
     2161 tcgtcgtcat cggcaagggc gcccacacgc cgctgtgcta ccccgacgcc atcggcaagc
     2221 agctgacgca gtcgctcgat cgcctgcaga cggactatgt cgacatctac ttcatgcacc
     2281 gcgacaacct cgacgtgccg gtcggcgagt tcgtcgacgc catggacgcc gaagtaagga
     2341 agggccgcat ccgcggcatc ttcggcggct ccaactggag ccgtgaacgc atggacgagg
     2401 cgatcgccta cgccgggcgc accggcaagc aggcgcccgg cgcgctcagc aacaattttg
     2461 ccctcgccga aatgatcaag ccgatctggg ccggctgcat cgccgcctcc gacgacgcct
     2521 acaaggcgtg gctcgtcgag caccagatcc cgaacttctc gtggtcgagc cagggccgcg
     2581 gcttcttcac cgaccgggcc ggacgcgaca agcgggataa tgccgagctc gtcgacacct
     2641 ggtactcgga gggcaatttc gcccgccgcg accgcgccat cgaactgggc cggcaactgg
     2701 gcgccagccc catccacatc gccctcgcct acgttctcgc ccagcccttc ccgtcgatcc
     2761 cgctgatcgg gccgcggcgg ctggaggagc tcgacgattc gatcaaggcg ctgtcgatcc
     2821 gcctcacccc cgagcaggtc cgctggctgg aacacggctg aacgccccgc cacacatatg
     2881 gcctgagcgg ccgcaaaccc cgcgggattt ttccgtcccg cgggaataaa ctcccgctac
     2941 gcctgttgag gctggcatgc gatgccgccc ggcacgcgcg taatccaaac gggagactgt
     3001 catgaaactc agcacactgc ttttgggcgc ggccgccatc ggcctgctcg ccacctcggt
     3061 tggctacgcc gacgactacg tcaacggcgc ggtcaagtcg gccatggtcg gcggcaagga
     3121 aatcctcacc gacgccaagg gcatgaccct ctacacctgg gacaaggaca ccgccggcgt
     3181 ctccaactgc tacgaccagt gcgccaccaa ctggccgccg gcgatggctt cggccgacgc
     3241 caaggcgtcc ggcgacttca ccctcgtcgc ccgcaaggac ggctccaaca tgtgggctta
     3301 caagggcctg ccgct
//
LOCUS       DATAZA010000510         2966 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_195166, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000510 DATAZA010000000
VERSION     DATAZA010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2966
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195166"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..260)
                     /locus_tag="VHZ56_12655"
     CDS             complement(<1..260)
                     /locus_tag="VHZ56_12655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium chelatase domain-containing protein"
                     /protein_id="HEX4298862.1"
                     /translation="MVARVQTVAFHGIEAVPVDVQAQIAPGLVAFTIVGLPDKAIKEA
                     GERVRAALVASGLGLPPKRITINLAPADLPKEGSHYDLPIALA"
     gene            467..1324
                     /locus_tag="VHZ56_12660"
     CDS             467..1324
                     /locus_tag="VHZ56_12660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003796 - lysozyme activity [Evidence
                     IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA];
                     GO_process: GO:0016998 - cell wall macromolecule catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GH25 family lysozyme"
                     /protein_id="HEX4298863.1"
                     /translation="MDFAALSRSPRLLLRAFAALGVLLVLSACAQSPHARLGSEIGPP
                     IDGDMRPHPAVARARVMPIQGLDVARYQGAIDYAKVRAAGVQFVYMKSTEGNDYVDPA
                     FADNWVRAKTAGLAHGAYHFMTWCSTAADQARWFDKNVPADADALPPVLDLEWNHESS
                     CTTKFSRADMLDKIHVMLNAMEKHTGKVPVIYTDITFNRDVLEGEHFDNAFWVRSTAA
                     EPPVRYGDRQWMLWQWTQTGTLNGVVGAVDRNVFYGDEDDWTVFLLTGCDPRMVNALG
                     PQGRCQLVK"
     gene            complement(1609..2001)
                     /locus_tag="VHZ56_12665"
     CDS             complement(1609..2001)
                     /locus_tag="VHZ56_12665"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX4298864.1"
                     /translation="MIADSEAQAWINAYGEAWITQDPDRIVRLFSPGALYRERRFHKG
                     ISGRDAIRDYWKLIVHELQRDVGFTVEQVIVAGDQAFIHWRSHFTWRPINGILELDAM
                     SRISFAPADGPGLRQADAFEEWIDSREG"
     gene            complement(2068..2703)
                     /locus_tag="VHZ56_12670"
     CDS             complement(2068..2703)
                     /locus_tag="VHZ56_12670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEX4298865.1"
                     /translation="MRLDSLLLALSTFFATLGPADLILVYAALTERNTRAERQSMALR
                     GALIATGILLFFAVFGQALLGLFGITLPALRIAGGVLLLLISIDMVFARHSGGTGTTR
                     EEEDEARTRPDISVFPLATPLIAGPGSISATILLATGAGTFSVAWLLVVVAMLAILVL
                     CYLGMLVAIPIQRLLGLTGLAVVSRVVGVLLAALAMQFLIDGIKAAGLFGG"
     gene            2782..>2966
                     /locus_tag="VHZ56_12675"
     CDS             2782..>2966
                     /locus_tag="VHZ56_12675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298866.1"
                     /translation="MSDIVPSGLALPDSTHRDRRIAWTAGLSVAAHVAVLAWLFWPHG
                     TAPVPAAPLPVTVEIVTP"
BASE COUNT          510 a          977 c         1055 g          424 t
ORIGIN      
        1 gccagcgcga tcggcaggtc gtagtgactg ccctccttgg gcaggtcggc cggcgccagg
       61 ttgatggtga tgcgcttggg cggcaggccg agcccggagg cgacgagcgc ggcgcgcacc
      121 cgctcgccgg cttccttgat cgccttgtcg gggaggccga cgatggtgaa ggcgacgagg
      181 cccggcgcga tctgcgcctg cacgtccacc ggcaccgcct cgatcccgtg gaacgccacg
      241 gtctgcacgc gggcgaccat ctccaccccc agccagctcc gggaaaaccc taacaagggg
      301 cagcggcgcc cgcaagaaca attcgtgaac gctgatatcc gtggcggcgg tggcgattcc
      361 gcctgccgtt aaccatgccg cgatatcaac gggttagcgc aaggtttcgt ttacggagcc
      421 atgttgaatc gaaggctccg caacccgccc aaagccgtcg tccagcatgg atttcgccgc
      481 cctctcccgc tcgccccgcc tgctgctccg cgccttcgcg gcgctcggcg tgctgctcgt
      541 cctcagcgct tgcgcgcaga gcccgcatgc gcggctcggc agcgaaatcg ggccgccgat
      601 cgatggcgac atgcggccgc atccggcggt ggcgcgggcc cgggtgatgc cgatccaggg
      661 tctcgacgtc gcccgctacc agggcgccat cgactacgcc aaggtgcgcg ctgccggagt
      721 gcagttcgtc tacatgaagt cgaccgaggg caacgactac gtcgatccgg ccttcgccga
      781 caactgggtc cgggcgaaga ccgcggggct ggcgcacggc gcctaccatt tcatgacctg
      841 gtgctcgacc gccgccgacc aggcgcgctg gttcgacaag aacgtgcccg ccgacgccga
      901 cgcgctgccg ccggtgctcg acctcgagtg gaaccacgaa tcgagctgca ccacgaagtt
      961 ctcgcgcgcc gacatgctgg acaagatcca cgtgatgctg aacgcgatgg agaagcacac
     1021 cggcaaggtg ccggtcatct acaccgacat caccttcaac cgcgacgtgc tcgagggcga
     1081 gcacttcgac aatgcgttct gggtgcgctc gacggcggcc gagccaccgg tgcgctatgg
     1141 cgaccggcag tggatgctct ggcagtggac gcagacgggc acgctcaacg gcgtcgttgg
     1201 cgccgtcgac cgcaacgtgt tctacggcga cgaggacgac tggacggtgt tcctgctcac
     1261 cgggtgcgat ccgcgcatgg tcaacgcgct cggcccgcag gggcgctgcc aactggtgaa
     1321 atagcgccac tgcgcgcttg cgggcgcgtc ggcgcgcgcc taggtttcgg ccattgttgc
     1381 cgggcaagac gcccagcctg atgcgggaga aaaccgatgg cgaaaagtca gatgcactcc
     1441 aacaaggaag ccaagaagcc caagaaggaa aagccgaagg tcctggcgac cgcgggcatg
     1501 gcgccgccgg ccgcgagcag cggcaagaag aagtagccgc gaccgctcgc ctgtcggcag
     1561 gcacggattt cagggccgcc accgggcggc cctttttgca tccgcggttc agccttcgcg
     1621 gctgtcgatc cattcctcga aggcgtcggc ctggcgcagg ccgggaccat cggccggcgc
     1681 gaagctgatg cgcgacatgg cgtcgagctc gaggatgccg ttgatcggcc gccaggtaaa
     1741 atgcgagcgc cagtggatga aggcctggtc gccggcgacg atcacctgct cgacggtgaa
     1801 gccgacatcg cgctgcagtt cgtggacgat cagcttccag tagtcgcgga tggcgtcgcg
     1861 gccggaaatg cccttgtgga agcgccgttc gcgatagagg gcgccggggc tgaagagcct
     1921 gacgatgcgg tcggggtcct gggtgatcca ggcctcccca taggcgttga tccaggcctg
     1981 ggcctcgcta tcggcgatca caatattctc ctcaaattat cgggcgagcc tagggcgaag
     2041 cgcgcaatgg ggtcaatcgc ggcggcctca gccgccgaac aggcccgccg ccttgatgcc
     2101 gtcgatgagg aactgcatgg cgagggcggc gagcaggacg ccgacgacgc ggctcaccac
     2161 cgcgagcccg gtgaggccga gcagccgctg gatcgggatg gcaaccagca tgccgagata
     2221 gcacagcacc aggatcgcca gcatggccac caccaccagc agccaggcga cgctgaaggt
     2281 gccggcgccg gtggcgagca ggatggtggc gctgatcgag ccgggcccgg cgatcagcgg
     2341 ggtggcgagc gggaacaccg aaatgtcggg gcgggtgcgc gcctcgtcct cttcctcgcg
     2401 ggtggtgccg gtgccgcccg aatggcgggc aaacaccatg tcgatcgaga tcagcagcag
     2461 cagcacgccg ccggcgatgc gcagcgccgg cagggtgatg ccgaagaggc cgagcagcgc
     2521 ctggccgaag accgcgaaga acagcaggat gccggtggcg atgagggcgc cgcgcagcgc
     2581 catcgattgc cgctcggcgc gggtgttgcg ctcggtcagc gcggcataga cgaggatgag
     2641 gtcggccggc ccgagggtcg caaagaaggt cgagagcgcg agcaggaggc tgtcgagacg
     2701 catgccggcc agcatggcgg aggcgacggt gaaaggcgag gggtctcgca aaggccgcga
     2761 tcggcatggc aagctcgccg catgtccgac atcgttccgt ccggccttgc ccttccggat
     2821 tccacccacc gcgaccgccg catcgcctgg acggccgggc tgtcggtggc ggcgcatgtg
     2881 gcggtcctcg cctggctgtt ctggccgcac gggacggcgc cggtgccggc ggcgccgctg
     2941 ccggtgacgg tcgagatcgt gacgcc
//
LOCUS       DATAZA010000511         2212 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3214156, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000511 DATAZA010000000
VERSION     DATAZA010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3214156"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..663
                     /locus_tag="VHZ56_12680"
     CDS             <1..663
                     /locus_tag="VHZ56_12680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013897048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HEX4298867.1"
                     /translation="TGVLCGDRAVSVPPWPDRVAAVRDRLGRFARAAEAAGKTIVIEN
                     HQDFTARELAGFCKEFGPAVRIAYDTGNSFPVAEAPLDFTRTIAPYVRHLHLKDYRVQ
                     PTPEGFRLVRCAIGDGAVPFGDILALLGAHHDELTAVLEPGALDVRHVRLRTDAWWQG
                     YPPRDPAALERCLAATLRNALPPGADYRTPWEKGEDGALDAYELAMIRRSAANMRALG
                     IF"
     gene            complement(676..1653)
                     /locus_tag="VHZ56_12685"
     CDS             complement(676..1653)
                     /locus_tag="VHZ56_12685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011927616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4298868.1"
                     /translation="MTDSTADLAVKRPWRSRVNVPVATAFACIVILLVLGSLYSPNFL
                     SPEYLLQQLKVGAFLGIIATGMMLVILLGQIDLSVPWTLTLGAMMGCAAVSYGPAGQL
                     LAIPFGILCGLGIGLINGIGVAYLRIPSMIITLAVNAVAQGLMVAYTGGFAPQDSASP
                     AMKWLASASTFGLPHAVVVWAITGAIAVFVLNRTSFGRAVYGIGNRESAAYLSGVSTQ
                     RIVMVAFALSGGLAAFGGVLLAGYGGKAAQAMGDAYLLPAIAAVVLGGTSILGGRGSY
                     LGTVAGVILITLLQSILSVMQIAEFGRQIIYGVIIVAMLLLYGRDQKIR"
     gene            complement(1661..>2212)
                     /locus_tag="VHZ56_12690"
     CDS             complement(1661..>2212)
                     /locus_tag="VHZ56_12690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017991160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4298869.1"
                     /translation="SAPNFNSDLADALTGRVLGVVPASLVALAVLVLVVWIPWRRSEI
                     GRATYATGSSEVAAYMSGMPIRRAKFLAYVLAGAFAAMGGVFLTFFTYSGEASASNGG
                     TYTLYSIASVVLGGVSLFGGRGSAVGAIFGALAFRAIGDLLFVFNLDPLWQPLFQGVV
                     LVLAVSIGSARLFQVRNRLDLFN"
BASE COUNT          386 a          818 c          720 g          288 t
ORIGIN      
        1 accggcgtcc tctgcggcga ccgcgccgtg tcggtgccgc cctggcccga tcgcgttgcc
       61 gcggtgcgcg accgcctcgg acgcttcgcc cgcgccgccg aggccgccgg caaaaccatc
      121 gtcatcgaga accaccagga cttcaccgcg cgcgagctgg ccggcttctg caaggaattc
      181 gggccggcgg tacgcatcgc ctacgacacc ggcaacagct ttccggtggc cgaggcgccg
      241 ctcgatttca cccgcaccat cgcgccctat gtgcgccatc tgcacctcaa ggactatcgc
      301 gtgcagccga cgcccgaggg cttccgcctc gtccgctgcg ccatcggcga tggcgccgtg
      361 ccgttcgggg atatcctggc gctgctcggc gcccaccacg acgagctgac cgccgtgctc
      421 gagcccggcg cgctggacgt gcgccacgtc cggctccgca ccgatgcctg gtggcagggc
      481 tatccgccgc gcgatccggc cgccctcgag cgctgtctcg ccgccaccct tcgcaacgcg
      541 ctgccgcccg gcgccgacta tcggacgccg tgggaaaagg gcgaggacgg cgcgctcgac
      601 gcctacgagc tcgccatgat ccgccgctcg gccgccaaca tgcgtgccct cggcatcttc
      661 tgagcgcgcc ccgtcctagc ggatcttctg gtcgcgccca tacagcagca gcatggcgac
      721 gatgatcacg ccatagatga tctgccggcc gaattcggcg atctgcatga cgctgaggat
      781 cgactgcagc agcgtgatca ggatcacccc cgcgaccgtg ccgagatagg agccgcggcc
      841 gccgaggatc gaggtgccgc cgagcaccac ggcggcgatc gctggcagca ggtaggcatc
      901 gcccatcgcc tgcgccgcct tgccgccata gcccgccagc agcacgccgc cgaacgccgc
      961 cagcccgccg ctcagcgcga acgccaccat cacgatgcgc tgcgtcgaca cgccgctgag
     1021 ataggccgcc gattcgcggt tgccgatgcc atagacggcg cgcccgaagc tggtgcggtt
     1081 gagcacgaac accgcgatcg ccccggtgat cgcccacacc accaccgcat gcggcagccc
     1141 gaaggtgctg gccgaagcca gccacttcat cgccggcgag gccgaatcct gcggcgcgaa
     1201 gccgcccgtg taggccacca tcagcccctg cgccacggcg ttgaccgcca gcgtgatgat
     1261 catcgatggg atgcgcagat acgccacgcc gatgccgttg atgagcccga tgcccagccc
     1321 gcagaggatg ccgaacggga tggcgaggag ttgccccgcc gggccgtagg acacggccgc
     1381 acagcccatc atcgccccca gcgtcagcgt ccacggcacg ctgaggtcga tctggccgag
     1441 caggatcacc agcatcatgc cggtggcgat gatgccgagg aaggcgccca ccttgagctg
     1501 ctgcagcagg tactcgggcg acaggaagtt cggcgaatac aggctgccga gtaccagtag
     1561 gatgacgata caggcgaacg ccgtcgccac tggtacgttg acgcggctgc gccacgggcg
     1621 tttgacggcg agatctgctg tgctgtcggt catggtcgcc tcagttgaac aggtcgagcc
     1681 ggttgcgcac ctggaacagg cgcgccgaac cgatggacac cgccagcacc agcaccacgc
     1741 cctggaacag cggctgccac agcggatcga gattgaacac gaacagcagg tcgccgatgg
     1801 cgcggaacgc cagcgccccg aagatcgcgc cgacggcgct gccgcgcccg ccgaacagcg
     1861 acacgccgcc cagcaccacc gaggcgatcg aatacagcgt gtaggtgccg ccgttcgagg
     1921 ccgaggcctc gcccgaatag gtaaagaagg tgaggaacac cccgcccatc gccgcgaacg
     1981 cgccggccag cacgtaggcg aggaattttg cccgccggat cggcatcccc gacatgtagg
     2041 ccgcgacctc cgacgagccg gtggcgtagg tggcccggcc gatctcggag cgccgccatg
     2101 gaatccagac gaccagcacc agcaccgcca gcgccacgag gctcgccggc acgacgccga
     2161 gcacccgccc ggtcagcgcg tcggcgagat cggagttgaa gttcggcgcg ct
//
LOCUS       DATAZA010000512         1644 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3331110, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000512 DATAZA010000000
VERSION     DATAZA010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3331110"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..552
                     /locus_tag="VHZ56_12695"
     CDS             <1..552
                     /locus_tag="VHZ56_12695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019566388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEX4298870.1"
                     /translation="FAGYRSEPGVSPASTVETFAAVRLFVDTWRWKDVPFYIRAGKSL
                     PVRATEVVVRFRRPPVALFDAIAASEANYVRFRVGPQVTIGIGARRKAPGGDMLGENV
                     ELDAVDDTTDDMMPYERLIADAMAGRRQLFTRQDAAELAWRVVDPVLDLGDDPAPYAP
                     GTWGPAEAMRNFGPPGGWVDPQP"
     gene            855..1322
                     /locus_tag="VHZ56_12700"
     CDS             855..1322
                     /locus_tag="VHZ56_12700"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheW domain-containing protein"
                     /protein_id="HEX4298871.1"
                     /translation="MTAATETDTRFYLLCLAGSVQCALPLSDVVEVMRPPPAEALAGA
                     PSFVSGVAVVRGAPLLVVVLQRLFGGDEQPPDRLVVARSGSRRVGLAVNGIVGVRALS
                     RQLLADLPPLLEHGSPAIIEIATLDNALLLLLDAARIVPDDVFARLEGRAMAS"
     gene            1319..>1644
                     /locus_tag="VHZ56_12705"
     CDS             1319..>1644
                     /locus_tag="VHZ56_12705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298872.1"
                     /translation="MTIHPEPSESERFRDIVADRFGLRFEDAKLGDLGDLLHRRAQAC
                     GIDAMHYLAYVDDSGPEDGRLAEELTVGETYFFRNGDQFRALEHVLRARIRTPSATRR
                     LSVLSAG"
BASE COUNT          253 a          533 c          543 g          315 t
ORIGIN      
        1 tttgcgggct atcgctccga gccgggcgtt tcgcccgcat cgaccgtcga gacctttgcg
       61 gctgtccgcc tgttcgtcga cacctggcgc tggaaggacg ttccgttcta catccgcgcc
      121 ggcaagtccc tgccggtgcg cgcgaccgag gtcgtggtgc gcttccgccg gccgcccgtc
      181 gcactgttcg acgcgatcgc cgcgagcgag gccaactacg tccgcttccg ggtggggcca
      241 caggtcacga tcggcatcgg ggcgcgccgc aaggcgcccg gtggcgacat gctgggtgaa
      301 aatgtcgagc tcgacgcggt cgacgacacc accgacgaca tgatgcccta cgagcggctc
      361 atcgcagacg ccatggcggg ccggcggcag ctcttcaccc gtcaggacgc cgccgaactt
      421 gcctggcgcg tggtcgatcc ggtgctcgat ctcggcgacg acccggcgcc ctatgcgccg
      481 ggaacctggg ggccggccga agccatgagg aacttcgggc cgcccggtgg atgggtcgat
      541 ccgcaaccgt gaaggaaccg ccgatgctcg gcatcacggc acttgcgatg ctggccgtcg
      601 gtgtcgccaa ggcagcgagg atcggttcga gccagtcaaa tcggccgatt gactctcagc
      661 acccggtatt tctacgcgtt ttctaagcac tgcggcaatc acgcaaagcc atgtttggaa
      721 atcactctcc ccagcgctct gcggggtttt ccagtttgaa gtggtgcgaa tcaagcaatc
      781 gactcagact gagggttcac cttgttgagg gcagtgacgg caggccttga ggcttcttca
      841 cgcacgtgag cgacatgact gccgcaactg aaaccgacac ccgattctac ctgttgtgtc
      901 tggcaggttc ggtgcagtgc gccctgccgc tgagcgatgt cgtcgaggtc atgcgacccc
      961 cgccggccga ggcgctggca ggggcgccgt cctttgtttc gggtgtcgcc gttgtacggg
     1021 gtgctccgct tctggtggtc gttcttcagc gccttttcgg cggcgatgag cagccccccg
     1081 atcgcctggt ggtggcgcgg tcaggcagcc gccgggttgg cttggcggtc aatggcatcg
     1141 ttggggttcg cgcattgtcc agacaattgc tggccgatct tccgccgctg cttgagcacg
     1201 gctcgccggc gattatcgag atcgccacgc tcgacaatgc gctgctgctc ctgctcgatg
     1261 ccgcacgcat cgtaccagac gacgtttttg caaggctcga aggccgggcg atggcatcgt
     1321 gaccattcac cccgaaccat cagagtcgga gcggtttcgt gacatcgtgg ccgacaggtt
     1381 cggcctgcgc ttcgaagacg ccaagctggg agacctcggc gatctgttgc accgccgcgc
     1441 ccaagcctgc ggcatcgatg caatgcacta cctcgcctac gtcgacgata gcgggccgga
     1501 ggacggccgg ctcgccgagg aattgacggt gggcgaaacg tatttctttc gcaacgggga
     1561 ccagttccgc gccctggagc acgttctgcg tgcgcgcatc cggacgccgt cggcgactcg
     1621 ccggctctcg gtcctgtcgg cggg
//
LOCUS       DATAZA010000513         5667 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_891791, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000513 DATAZA010000000
VERSION     DATAZA010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5667
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_891791"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..831)
                     /locus_tag="VHZ56_12710"
     CDS             complement(<1..831)
                     /locus_tag="VHZ56_12710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEX4298873.1"
                     /translation="MTPPPKLSATPPVAERRQHAVTQFGVTRDDPYAWLRADNWQEVM
                     QAPETLPADIRSYLEAENSYFAAAFEAPQAELIETIYREIRGRIEEDESGIPTPDGPW
                     SYNSRMLEGEQYPQIVRTRRSGGDETVLLDCNIEAGEGYFGFGGAEHSPDHSLLLWAA
                     DRQGSEYYTIHIRDLATGKDTGETISEAADEGVWSADGRAIYYTEFDESHRPYRVRRH
                     QLGTPQEADEIVFEEADPGFFVSVGETLDRRFVTIDVHDHQTSETWLIAAGGEGTPRL
                     V"
     gene            complement(883..1302)
                     /gene="msrB"
                     /locus_tag="VHZ56_12715"
     CDS             complement(883..1302)
                     /gene="msrB"
                     /locus_tag="VHZ56_12715"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009452151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEX4298874.1"
                     /translation="MDKTMETNRETIRKSDAEWRAELTPEQFRVMREHGTERPFASPL
                     NNEHRDGVFACASCGQELFASGTKFDSGTGWPSFFAPIRKEAVGETSDRSLFMTRTEV
                     HCSRCGAHLGHVFPDGPRPTGLRYCMNGVSLTFEAKA"
     gene            1423..3795
                     /gene="mbhE"
                     /locus_tag="VHZ56_12720"
     CDS             1423..3795
                     /gene="mbhE"
                     /locus_tag="VHZ56_12720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006316619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogen gas-evolving membrane-bound hydrogenase
                     subunit E"
                     /protein_id="HEX4298875.1"
                     /translation="MVLDFDAFAILLLLAPFLVATLAPAIADNTGPAAGWILAIVPAG
                     LFAAFCSLVPQIAAGHPLRLAIDWVPVLGLDLGFTIDGLSLVFALLITGIGAAIFVYA
                     GSSLAAHPRRGRFLATLLCFMGAMLGLVLADSLVALFAFWELTAVTSFLLIGFDRERE
                     AARRAAVQALVVTGLGGLSLLAGGVLLRVIAGTWDISGLGASQSLHLAGAAYPWVVGF
                     IACAAFTKSAQLPFHFWLLGSMQAPTPVSAYLHSATMVQAGIYLLARFSPLLSGTPLW
                     QDVLCGFGGLTLLWGAVWALRETDIKRLLALTTIAALGLGVLLLGVGGEAAAVAVAAL
                     IVAHALYKAALFLVAGILEHGTGTRDLAALGGLRDHLAISFIAAALAAVSMFGLPPVL
                     GYLAKEAIYAGLSAADPRAIAILVVVLVGNALFGTAALALVIRPFMGAHRPTPVAPHE
                     GGFPLWIGPIVFGLVGFSVVFAVAGYSDLIVAPMAAAIVGAPVAAHLGFAVDPRGLPI
                     WLTLLTWALAVLVYWRLDTVRALLAQLEKRIGWTFGRGFDQVLAGLLRLSAGLARMLH
                     HGRLELYLVVIFAALALVLVVPLAALGGWPALPDPGALNPYEWAAVLLAIAGLALVVF
                     ARSRLFAIVALGIQGLAVALLFLFFGAPDLGFTQLLIETLSVVLLALVMTRLRLGARD
                     PRPLQDWLRDGALALICGGGITLLLMRVVAGPLDERLGSFFAANAAALAHGRNIVNVI
                     LVDFRGLDTLGEATVVMTAGIAVLALLRRQHRREPVEQPARPSRRKAAAP"
     gene            3792..4196
                     /locus_tag="VHZ56_12725"
     CDS             3792..4196
                     /locus_tag="VHZ56_12725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006727213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MnhB domain-containing protein"
                     /protein_id="HEX4298876.1"
                     /translation="MSTLVFRTVAPLLGALMLLFSLIVLFRGHNDPGGGFIGGLLAAC
                     AITVYGMARGVGAVRRLLRLNPIVVAGAGILVAAFAGLLSAVVGDPFLTGLWLPFAIF
                     GTPGLFDVGVYLTVFGTVAAIVLALEDSGEGA"
     gene            4196..4573
                     /locus_tag="VHZ56_12730"
     CDS             4196..4573
                     /locus_tag="VHZ56_12730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit C"
                     /protein_id="HEX4298877.1"
                     /translation="MESVLAPLVGLFIAAAIYLMLSRALVRMLLGIVLLGNGVNLLIF
                     VAGRLTRAAPPLIPAGQAAPAGAIANPLPQALILTAIVIGFALFAFLAVLAFRAYQAL
                     DADDTGSMRLAEPEPHLHPPLEY"
     gene            4577..>5667
                     /locus_tag="VHZ56_12735"
     CDS             4577..>5667
                     /locus_tag="VHZ56_12735"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HEX4298878.1"
                     /translation="MLDHSTPLADWVVVLPVILSLAGAALLLVLRRFVRWQPWLCAAA
                     LLLVFACDAMLVQRVLASGPLSMTMGHWLPPFGISFTADAMGACFALAASFVALCVLL
                     YMQGDAPDSAVRDGVYPLLLLLIAGVSGAFLTGDLFNLYVWFEVMLIASFGLVVLAGH
                     PLQLDAAVKYAVPNIVGTTLFLAALGLLYGLVGTLNMADIIGAAARADPALLAAVGAL
                     FLLAFGIKAAVFPVNAWLPASYHAPPAALSALLAALLSEVGVYAVIRVFVMLLPTIHE
                     TLGPVIFICGVLTVVLGPLLAIAETNLRRAIGFLLIGGVGVALLGVPEGHMSGYFAAV
                     SYVLAAIPTLAALYLCAGLVERLSGHSDVR"
BASE COUNT          606 a         2206 c         1731 g         1124 t
ORIGIN      
        1 caccagccgc ggcgtgcctt cgccgccggc cgcgatcagc cacgtctccg aggtctggtg
       61 gtcgtgcacg tcgatcgtca cgaatcgccg gtccagcgtc tcgccgaccg acacgaagaa
      121 gcccggatcg gcctcctcga acacgatctc gtccgcctcc tgcggcgttc cgagctggtg
      181 ccgccgcacc cggtacggcc ggtggctctc gtcgaactcc gtatagtaga tcgcccgccc
      241 gtccgccgac cacacgccct catcggccgc ttcgctgatg gtctcgccgg tgtccttgcc
      301 cgtcgcgagg tcgcggatgt ggatggtgta gtactccgag ccctgccggt cggccgccca
      361 cagcagcagg gaatggtccg gcgaatgctc cgccccgccg aagccgaaat agccctcgcc
      421 cgcctcgatg ttgcagtcga gcagcaccgt ctcgtcgccg ccgctccgcc gcgtccgcac
      481 gatctgcgga tactgctcgc cttcgagcat gcgcgaattg tacgaccacg gcccgtccgg
      541 ggtcgggatg ccgctctcgt cctcctcgat gcggccgcgg atctcccggt agatcgtctc
      601 gatcagctcc gcctgcggcg cctcgaacgc cgcggcgaaa taactgttct cggcctcgag
      661 atagctccgg atgtccgccg gcagcgtctc cggcgcctgc atcacctcct gccagttgtc
      721 ggcgcgcagc caggcatagg gatcgtcgcg cgtcaccccg aactgggtga cggcgtgctg
      781 gcggcgctcg gcgacgggcg gggtggcgga aagcttgggg ggaggggtca tgcgcggctg
      841 atataggcgc cgcgacatgc cccgccaacc cgtacggaaa tcctaggcct ttgcctcaaa
      901 tgtaaggctg acgccattca tgcagtagcg cagcccggtc ggccgcggcc cgtcgggaaa
      961 cacgtgcccc agatgcgccc cgcaccggct gcaatgcacc tctgtccgcg tcatgaacag
     1021 cgagcggtcg ctggtctcgc ccaccgcctc cttgcggatc ggcgcgaaaa agctcggcca
     1081 gccggtgccc gaatcgaact tcgtgcccga cgcgaacagc tcctgtccgc agctcgcgca
     1141 ggcaaacacg ccgtcgcgat gctcgttgtt cagcgggctc gcgaacggcc gctcggtgcc
     1201 atgctcgcgc atcacccgga actgctccgg cgtcagctcg gcccgccact cggcgtcgct
     1261 cttgcggatc gtctcccggt tcgtctccat cgtcttgtcc atgaaaccct cctgttgcgc
     1321 ggcagatgtg gtgagccgcc cgatcacccg ccactcacat cttggtggca atcgcgggcg
     1381 aggccgctaa ggtcaccccg gtgagtcccg aggggcggcc atttggtcct cgatttcgac
     1441 gccttcgcca tcctgctgct gctcgcgccg ttcctcgtcg cgaccctcgc gcccgccatc
     1501 gccgacaaca ccggccccgc tgccggctgg atcctcgcca tcgtcccggc cggcctgttt
     1561 gccgccttct gcagcctcgt gccgcaaatc gccgccggcc acccgctgcg cctcgccatc
     1621 gactgggtac ccgtcctcgg cctcgacctc ggctttacca tcgacggcct gagcctcgtc
     1681 ttcgcgctgc tcatcaccgg catcggcgcc gccatcttcg tctatgccgg cagttctctc
     1741 gccgcccatc cgcgtcgcgg ccggttcctc gcaacgctcc tctgcttcat gggcgccatg
     1801 ctcgggctcg tgctggccga cagcctcgtc gccctgttcg ccttctggga gctgaccgcc
     1861 gtcacctcgt tcctcctcat cggcttcgac cgcgagcgtg aggccgcccg ccgcgcggcc
     1921 gtccaggccc ttgtcgtcac cggcctcggc ggcctgtcgc tgctcgccgg cggcgtcctg
     1981 ctgcgcgtca tcgccggcac ctgggatatc tctggcctcg gcgcctcgca gagcctccac
     2041 ctggccggcg ccgcctaccc ctgggtggtc ggcttcatcg cctgcgccgc cttcaccaaa
     2101 tcggcgcagc tgccgttcca tttctggctg ctggggtcga tgcaggcgcc gacgccggtc
     2161 tcggcctacc tccactccgc caccatggtg caggccggca tctacctgct cgcccgcttc
     2221 tcgccgctgc tgtccggaac gccgctctgg caggatgtgc tgtgcggctt cggcggcctc
     2281 accctgctct ggggcgccgt ctgggccctg cgcgaaaccg atatcaagcg gctgctcgcc
     2341 ctcaccacca tcgccgctct cgggctcggc gtcctgctgc ttggcgtcgg cggcgaggcc
     2401 gcggcggtgg ccgtcgcggc gctcatcgtc gcccatgccc tctacaaggc ggcgctgttc
     2461 ctcgttgccg gcattctcga gcacggcacc ggcacgcgcg atctcgccgc gctcggcggc
     2521 ctgcgcgatc acctcgccat cagcttcatc gctgccgccc tcgcggccgt ctcgatgttc
     2581 ggcctgccgc ccgtcctcgg ctacctcgcg aaggaagcga tctatgccgg cctctctgcc
     2641 gccgacccgc gcgccatcgc gatcctcgtc gtcgtgctcg tcggcaacgc cctgttcggc
     2701 accgcggcgc tggccctggt gatccgcccc ttcatggggg cccataggcc gacgcccgtc
     2761 gccccgcatg agggtggctt tccgctctgg atcggaccca tcgtcttcgg tctcgtcggc
     2821 ttctccgtgg tctttgccgt cgccggctac agcgacctca tcgtcgcgcc gatggcagcc
     2881 gcgatcgtcg gcgcaccggt cgcggcgcat ctgggcttcg ccgtcgatcc ccgcggcctg
     2941 ccgatttggc tgacccttct gacctgggcg ctggcggtcc tcgtctactg gcggctggac
     3001 accgtgcgcg cgctgctggc gcagcttgag aagcgaatcg gctggacctt cggccgcggc
     3061 ttcgaccagg tgctcgccgg tctgctccgg ctctccgccg gcctcgcccg catgctgcac
     3121 catggccggc tcgagctcta tctcgtcgtg atcttcgccg cgctggcatt ggtcctcgtc
     3181 gtgccgctcg cggcgctggg cggctggccg gcgctgcccg atcccggcgc cctcaacccc
     3241 tatgaatggg ccgccgtcct gctcgccatt gccggcctcg cgctggtggt cttcgcccgc
     3301 tcgcgcctct tcgccatcgt cgcgctcggc atccagggcc tcgctgtcgc gctgctcttc
     3361 ctgttcttcg gtgcgcccga tctcggcttc acccagctgc tgatcgaaac cctctcggtg
     3421 gtcctgctcg ccttggtgat gacccggctg cgcctcggcg cgcgtgaccc gcggccgctg
     3481 caagactggc tgcgcgatgg cgccctggca ctgatctgcg gcggcggtat cacgctgctg
     3541 ctcatgcgcg tcgtcgccgg cccgctcgac gaacggctcg gcagcttctt tgccgccaat
     3601 gccgcggcgc ttgcccacgg ccgcaacatc gtcaacgtca tcctcgtcga cttccgtggc
     3661 ctcgacacgc tgggcgaggc gacggtggtg atgaccgccg gcatcgccgt gctggcgctg
     3721 ctccgtcgcc agcatcgtcg ggagcctgtc gagcagccgg cacgcccgtc gcgtcgcaag
     3781 gccgcagcgc catgagcacg ctggtcttcc gcaccgtggc gccgctgctc ggcgcattga
     3841 tgctgctgtt ttcgctgatc gtcctcttcc gcggccacaa cgacccgggt ggcggcttca
     3901 tcggcggcct gctcgccgcc tgcgccatca cggtctatgg catggcccgc ggcgtcggcg
     3961 cagtgcggcg tctgctgcgc ctcaatccca tcgtcgtcgc cggagcgggc atcctcgtcg
     4021 ctgccttcgc cggcctcctt tcggcggtcg tcggcgatcc gttcctcacc ggcctctggc
     4081 tgcccttcgc catcttcggc accccgggcc tgtttgacgt cggcgtctac ctcaccgtct
     4141 tcggcaccgt cgccgccatc gtgctggcgc tcgaggacag cggggagggg gcctgatgga
     4201 gagcgtgctc gccccgttgg tcggcctctt catcgcggcc gcgatctatc tcatgctgtc
     4261 gcgcgcgctg gttcgcatgc tgctcggcat cgtgctcctc ggcaatggcg tgaacctgct
     4321 gatcttcgtt gccggccggc tcacccgcgc cgcgccgccg ctcataccgg ccgggcaggc
     4381 ggcgcccgca ggcgctatcg ccaatccgct tccgcaggcg ctgatcctca ctgccatcgt
     4441 cattggcttc gccctgttcg ccttcctcgc cgtgctggcc ttccgcgcct accaggccct
     4501 cgatgccgac gataccggca gcatgcgtct cgccgagccg gagccgcacc tgcatccgcc
     4561 gctggagtac tgagcggtgc tcgaccattc cacgccgctc gccgactggg tcgtcgttct
     4621 tccggtgatc ctgtcgctgg ccggtgccgc gctgctgctg gtgttgcgcc gcttcgtccg
     4681 ctggcagccc tggctctgcg ccgcggccct gctcctcgtc ttcgcctgcg atgccatgct
     4741 ggtgcagcgg gtgcttgcgt cgggcccgct gtcgatgacc atgggccact ggctgccgcc
     4801 cttcggcatc agcttcaccg ccgacgccat gggcgcctgc ttcgccctcg cagcctcgtt
     4861 cgttgcgctc tgcgtcctgc tctacatgca gggcgacgcc cccgactccg ccgtacgcga
     4921 cggcgtctat ccgctgttgc tgctgctcat tgccggtgtc agcggcgcct tcctcaccgg
     4981 cgacctcttc aacctctacg tctggttcga ggtgatgctg atcgcttcgt tcgggctggt
     5041 ggtgcttgcc ggccatcccc tgcagctcga tgctgccgtc aaatacgccg tccccaacat
     5101 cgtcggcacg acgctgttcc tcgccgccct cggcctgctc tacggcctcg tcggcaccct
     5161 caacatggcc gacatcatcg gcgccgccgc ccgcgccgac ccggccctgc tcgccgctgt
     5221 cggcgcgttg ttcctgctgg ccttcggcat caaggccgcg gtctttcccg tcaacgcctg
     5281 gctgcccgcg tcctaccacg caccgcccgc tgccctctcg gcacttctgg cggcactgct
     5341 gtccgaggtc ggcgtctacg ccgtcatccg ggtcttcgtg atgctgctgc ccaccatcca
     5401 cgaaaccctc gggccggtga ttttcatctg cggtgtcctg accgtggttc ttggtccgct
     5461 cctcgccatc gctgaaacca atctgcgtcg cgccatcggc ttcctcctca tcggaggtgt
     5521 cggagtcgct ctccttggcg tccccgaagg ccatatgtct ggttattttg cagccgtttc
     5581 gtatgtcctc gccgccatcc cgactctggc ggcactttac ctgtgcgccg gcctcgtcga
     5641 gcgcctgagc gggcattccg acgtccg
//
LOCUS       DATAZA010000514        10923 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2981574, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000514 DATAZA010000000
VERSION     DATAZA010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 10923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10923
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2981574"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..405
                     /locus_tag="VHZ56_12740"
     CDS             <1..405
                     /locus_tag="VHZ56_12740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009489434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HEX4298879.1"
                     /translation="LDLYDRPANLFVAGFIGSPAMNMIPGKMDGTSFVAEDGTRINLS
                     KAPAGSAGRPVTLGVRPEHFHLDPNGVAAEILTVEPTGSETQVVARFAGQEIMGAFRE
                     RITTAPGQSLKITPEAGAVHLFDTQTGQRIAA"
     gene            complement(449..1204)
                     /locus_tag="VHZ56_12745"
     CDS             complement(449..1204)
                     /locus_tag="VHZ56_12745"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX4298880.1"
                     /translation="MKSLILAAGIGLALSLAAHADPIKLATEGAYPPFNYVDDEGHVG
                     GFDVEVGNELCRRAGLQCTWMVNDWDNIIQNMVSGDYDAIVADMTITDEHKQTIDFTD
                     PYFPADPSTYLALASRKLDFKSFAGLKVGVQTGTAQASWAEQHLKPASTLVPYDTNDA
                     AVAGLKDGNVDLVLADTAYLGNQAQDSAGTLVTGGPQLMIGVGAGIGVRKDETDLKTK
                     LNTALAEIKADGWLDGEFRKDFPDLGPGPFFGN"
     gene            complement(1346..2140)
                     /locus_tag="VHZ56_12750"
     CDS             complement(1346..2140)
                     /locus_tag="VHZ56_12750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007876537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4298881.1"
                     /translation="MTLSTRIAPHLPYLRRFSRATTGSQTSGDAYVAATLEALIADVS
                     IFPETSSDRISLYKLFSKLFSSSAVRVPNPQPHFVWEQRAANNLANLAPRPRQAFLLV
                     AVEGFTYPQAAEILDVSDTEFQRMLDEASREISRQVATDILIIEDEPLIAMDIEQLVE
                     SLGHRVVGIARTHKEAVALYGKTAPKMILADIQLADGSSGIDAVNDILSTEALPVIFI
                     TAFPERLLTGERPEPTFLVTKPFNPDMVKALISQALFFDEGSRAAA"
     gene            2309..2491
                     /locus_tag="VHZ56_12755"
     CDS             2309..2491
                     /locus_tag="VHZ56_12755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006467674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016989 - sigma factor antagonist activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NepR family anti-sigma factor"
                     /protein_id="HEX4298882.1"
                     /translation="MIDMSVPRTRRSDDGLGPNSDIGAKLRAFYGAVQDQPIPDKFLD
                     LLEKLDAVEQASKRKG"
     gene            2494..3042
                     /locus_tag="VHZ56_12760"
     CDS             2494..3042
                     /locus_tag="VHZ56_12760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX4298883.1"
                     /translation="MQETPAFKRELLATLPSLRAFAVSLSGRHDKADDLVQDTMMKAW
                     AKQDSFQMGTNIKAWLFTILRNEFYSQMRKRGREVQDSDGAFTERLSVHPTQYGILDM
                     ADFKKALDTLPSDQREAIILIGASGFSYEEAAEICNCAVGTMKSRVSRARTRLQDLLG
                     ISGEADYGPDAVSAQVTTHTLS"
     gene            complement(3039..3410)
                     /locus_tag="VHZ56_12765"
     CDS             complement(3039..3410)
                     /locus_tag="VHZ56_12765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298884.1"
                     /translation="MLLGERVLIVEDEFLIALDIQRILETAHPRRTVFARNFAEVAAL
                     GAGLADFDLAIISPPGPDPAERSVVDRLAATGAAIVVCTASRARLAGTAIADAIIVDK
                     PFADDHLLDACGQALARRRQP"
     gene            3561..4316
                     /locus_tag="VHZ56_12770"
     CDS             3561..4316
                     /locus_tag="VHZ56_12770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018070601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX4298885.1"
                     /translation="MSVILPISTRRVPCEQCPLRAMSQFRAFSPEELRFVSSFKRGEL
                     VAEPGAMILAEGAHSAQLFTLLSGWAFRYKTLEDGRRQILNYCLPGDLIGLQGSVIGA
                     MEHSVEALSPTVLCVFQRDQLNDLFRNHPGLSFDITWLASREERMLDENLLSLGRRTA
                     LERAAYLVAFLYQRAAAVGLTEHRALLIPISQQHVADTLGLSIVHTNKTLRKLVDKQV
                     IRWHDRACEVLDAAALMEIAAWGGLLEGERPLI"
     gene            4373..5314
                     /locus_tag="VHZ56_12775"
     CDS             4373..5314
                     /locus_tag="VHZ56_12775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008126732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEX4298886.1"
                     /translation="MRVIGVLNRDGGTFRTMDIDAFAAHAAEVFAAHGHTLETRIVDG
                     AGLVAELGRAAGEADMLLAGGGDGTISAAAAAAYRRGIPLGVLPAGTMNLFARSLGLP
                     TDLNAAVEALASGDVRTVDIATANRRPFIHQFSIGIHPKLVKLRETLSYHGRIGKMLA
                     STRAAFGVIFRPPRFYVELKTSHGLERRSTAGISISNNPFEEGHIPHAERLDAGLLGI
                     YVVKPLTPWVLMRLCWGVVRGRWKAMPEVIDREAREVTIRFPRRKSSALAVIDGELIS
                     LPQQVELAIHPGALKVVVPRSEPVAEPEPAAASLALT"
     gene            complement(5360..5593)
                     /locus_tag="VHZ56_12780"
     CDS             complement(5360..5593)
                     /locus_tag="VHZ56_12780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298887.1"
                     /translation="MTHIKRRIVTILADHTLADDEKIEVLRQLEADSLSKERSATEGM
                     TPVDGDDGEDLKSIEQALRKLGQDPVDGRTASL"
     gene            complement(5667..6128)
                     /locus_tag="VHZ56_12785"
     CDS             complement(5667..6128)
                     /locus_tag="VHZ56_12785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298888.1"
                     /translation="MLGMLAPLLSLLGLETTELTDRLKRQAILWGAVAFLGIVGICFL
                     LVAINAGLTYAVGPVIAPLIIAVAAVVIAVAIVLVTHILDGADARRALERKRSAERTA
                     MMTTAAITALPLILKSPLLRDIGIPAGAALASALMLRRSGGSTRTDPGSRR"
     gene            complement(6134..6556)
                     /locus_tag="VHZ56_12790"
     CDS             complement(6134..6556)
                     /locus_tag="VHZ56_12790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298889.1"
                     /translation="MADTEETAPSGANSTRATRPATRARATAGRTRSRSRAARAKADL
                     AVEEGTLEDQVAELQNELRAVTRTLTRMGQSGADGVRTTAQARAQELADRGQSMLADA
                     QDEFGAFEKQIKDTIREKPLTAVAGAIAVGFLLAVITR"
     gene            complement(6725..6880)
                     /locus_tag="VHZ56_12795"
     CDS             complement(6725..6880)
                     /locus_tag="VHZ56_12795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003543790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3309 family protein"
                     /protein_id="HEX4298890.1"
                     /translation="MLSTILVVILILLLIGALPRWGYSRSWGVFPSGILGVVLVIVII
                     LVLMGRI"
     gene            complement(6914..7081)
                     /locus_tag="VHZ56_12800"
     CDS             complement(6914..7081)
                     /locus_tag="VHZ56_12800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298891.1"
                     /translation="MTRFEINTLQPAGRAALAWSPEGYDGRIHFGAVLGAMVPAIGIL
                     AAAAAMLFVAF"
     gene            complement(7221..8102)
                     /locus_tag="VHZ56_12805"
     CDS             complement(7221..8102)
                     /locus_tag="VHZ56_12805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003511536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEX4298892.1"
                     /translation="MLYDIRLELHYDYEGFVHGDRHLVRVAPASIPGVQRVIAASLAF
                     DPKPDSETNFVDFFGNLVTTIAYAGNHDRLDVRLSARVGVEDAAPPADLSPDLAGLQR
                     ELAGLWSLDSGSPHHFLAPSPRIALSRPLTEYARESMDRTLSVRAAAMDLCLRIHRDF
                     TYDRKSTNVETVPLEAFNLRRGVCQDFAQVMIAGLRGVGIPAAYVSGFLRTIPPKGEA
                     RLEGADAMHAWVRVWCGQHAGWIEFDPTNAMLAGADHITIGHGRDYTDISPIVGMLRS
                     SRGGQETKQSVDVIRVE"
     gene            complement(8108..10507)
                     /locus_tag="VHZ56_12810"
     CDS             complement(8108..10507)
                     /locus_tag="VHZ56_12810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HEX4298893.1"
                     /translation="MQRQSSKKPGTTGLIANYKLLPSIPDEMIDAAGNIRPGWSQLLA
                     GFDELGPEGLTARFERADQYLRDAGVFYRKYDSAAGKERAWPLAHVPLVIDETEWLQI
                     TRGLTQRAELLERIVADIYGDNHLVARGVLPPELVARNPEFLRPVVGIKPASGHYLHF
                     CAFELGRGPDGGWWVLGDRTQAPSGAGFALENRVATTRALSDIYSRMHVHRLAGFFRD
                     FRDALNGEARRNGGRVGILTPGQHNETYFEHAYIARYLGFTLLEGEDLVIEGGEVMVR
                     TVSGLKPVSVLWRRMDASFIDPLELRYDSRIGTPGMTEALRQGSISMVNAIGSGILET
                     RAFAAFMPRLSEALLGTAPELPTIATWWCGQPAERQHVLDNFDRMMIGPAFSTVLPIE
                     DRESTMLGSTLEPGPREALRRVLAEKGGQFVGQEPVTLSTAPLYADGKLEPRPITLRV
                     YAARTAKGWTIMPGGFARVGSSLDTAAIAMQRGGQAADVWVVSSKPVERVTLLSQQGE
                     KLVRQAVGDLPSRAADNLIWLGRYAERCEATVRILRAYNVRLAEVSNPDLPLLADTRT
                     YLESIDVDAASTLPQGLLGAIDSAVHSASQIRDRFSPDGWLALNDLRKTARNFAARVQ
                     PGDDATRAMTVLLRKLAGFSGLVHENMYRFAGWRFLEIGRRLERGIQIAGITRWLTRA
                     EAPDGALDMLLEIGDSVMTHRRRYNVAAGANSYIDLLVLDALNPRSVLFQVAELREQI
                     ERLPGGFDDGQLSATAKAVLQLHTQLRVAEPEDMSSERLAGLGSEIGRLADLIADAYF
                     A"
     gene            complement(10577..>10923)
                     /locus_tag="VHZ56_12815"
     CDS             complement(10577..>10923)
                     /locus_tag="VHZ56_12815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX4298894.1"
                     /translation="ILGLIHADPARTWTLIELAKAAGMSRTGFAQRFRAVVGIAPLAY
                     LTRWRMHLAERDLRQSDVLVSGLAYRLGYGSESAFSNAFKRVTGTAPRSYRIASRVAD
                     ALAAPPETPSAF"
BASE COUNT         1804 a         3472 c         3860 g         1787 t
ORIGIN      
        1 ctcgatctct acgatcgtcc cgccaatctg ttcgtcgccg gcttcatcgg ctcgccggcc
       61 atgaacatga ttccgggcaa gatggacggc accagcttcg ttgccgagga cgggacgcgc
      121 atcaacctca gcaaggcccc agctggttcg gccgggcggc cggtgacgct gggcgtgcgg
      181 cccgagcatt tccacctcga ccccaacggc gtggcggcgg agatcctcac cgtcgagccg
      241 accggatcgg agacgcaggt ggtggcccgc tttgccggcc aggagatcat gggcgccttc
      301 cgcgagcgca tcaccaccgc tccgggccag tcgctgaaga tcacgccgga ggccggcgcg
      361 gtgcacctct tcgacaccca gaccgggcag cggatcgcag cctagtttcg aacagccggc
      421 ccccgctgct gcggcagcgg ggctcgcctc agttgccgaa gaacgggccg ggaccgaggt
      481 cggggaaatc cttgcggaac tcaccgtcga gccagccgtc ggccttgatc tcggccagtg
      541 ccgtgttgag cttggtcttg aggtcggtct cgtccttgcg cacgccgatg ccggcaccca
      601 ccccgatcat caactgcggt ccgccggtca ccagcgtgcc ggccgaatcc tgcgcctggt
      661 tgccgagata agcggtgtcg gcgagcacca ggtcgacgtt gccgtccttg aggccggcca
      721 ccgccgcgtc attggtgtcg tatggcacga gcgtgctggc cggcttgagg tgctgctcgg
      781 cccagctggc ctgcgcggtg ccggtctgca ccccgacctt gagcccggcg aacgacttga
      841 agtcgagctt gcggctggcg agggcgaggt aggtcgacgg gtcggccgga aaatacggat
      901 cggtgaagtc gatggtctgc ttgtgctcgt cggtgatggt catgtcggcg acgatggcgt
      961 cgtagtcgcc gctgaccatg ttctggatga tgttgtccca gtcgttgacc atccacgtgc
     1021 attgcaggcc cgcccggcgg cagagctcgt tgccgacctc gacgtcgaag ccgccgacat
     1081 ggccttcgtc gtcgacatag ttgaacggcg ggtaggcgcc ctcggtcgcg agcttgatgg
     1141 ggtcggcgtg ggctgcgagc gacagggcca ggccgattcc cgccgcaagg atgaggcttt
     1201 tcaccgaacg cgatctcctg ccggcgccag cccgtcgccg gcggctagcc atagcgcaac
     1261 ggccggtgcg gtcaaagccg gcctccgcgc acaaaaatgg cggtcccgaa ggaccgccaa
     1321 gtgcaaggaa gacatgcggg agggatcagg ccgcagcgcg cgagccttcg tcgaagaaca
     1381 gggcctggct gatgagcgcc ttgaccatgt cgggattgaa cggcttggtg acgaggaagg
     1441 tcggctccgg ccgctcgccg gtcagcaggc gctcggggaa ggcggtgatg aagatcaccg
     1501 gcagcgcctc ggtcgagagg atgtcgttga cggcatcgat gccggacgag ccgtccgcca
     1561 gctggatgtc ggcgaggatc atcttggggg cggtcttgcc gtagagcgcg acggcctcct
     1621 tgtgggtgcg ggcgatgccg accacccgat ggcccagcga ttcgaccagc tgctcgatgt
     1681 ccatggcgat cagcggctcg tcctcgatga tcaggatgtc ggttgccacc tgccgggaga
     1741 tttcgcgcga ggcttcgtcg agcatgcgct ggaactcggt gtcggagacg tcgaggattt
     1801 ccgccgcctg ggggtaggtg aagccctcca cggcgaccag caggaacgcc tgcctgggcc
     1861 gcggcgcgag gttggcgaga ttgttggccg cccgctgttc ccagacgaaa tgcggctgcg
     1921 ggttggggac gcgcaccgcc gaggaggaaa acagcttgga aaagagcttg tagagcgaga
     1981 tgcggtcgct cgaggtttcc gggaagatcg acacatcggc gatcaacgct tcgagcgtgg
     2041 cggcgacgta ggcgtcgccg gaggtctgag aacccgtagt cgcgcgcgaa aatcggcgca
     2101 ggtagggcag gtgcggagcg atccgcgtgg acaatgtcat aagctgctcc ctgtgacgct
     2161 tgtgggtcgt aacccggccg ttcaacggac cggactctat ttcgttccgt gaactggaac
     2221 tttttatgaa gccgctcatt tatgctacca cgtcagggcg tagcgtcacc cctgctgaca
     2281 ggtccgggta gtgaaagaca aagagaagat gatcgacatg agtgtcccgc ggacgcggcg
     2341 ctcggatgac gggcttggtc cgaattccga cattggcgca aaattgcggg ctttctacgg
     2401 cgccgtgcag gatcaaccca tcccggacaa gttcctggac ttgcttgaaa agctcgacgc
     2461 ggtcgagcag gccagcaagc gaaagggcta gccgtgcagg aaacccccgc tttcaagagg
     2521 gaactcctcg ccacgctccc gtcgctccgc gccttcgcgg tgtcgctcag cggccgccac
     2581 gacaaggccg acgatctggt gcaggacacc atgatgaagg cctgggcgaa gcaggacagc
     2641 ttccagatgg gcaccaacat caaggcttgg ctgttcacca tcctgcgcaa cgagttctac
     2701 agccagatgc gaaagcgtgg tcgcgaggtg caggactccg atggggcctt caccgagcgc
     2761 ctgagcgttc acccgacgca gtacggcatc ctcgacatgg ccgacttcaa gaaggcactc
     2821 gacaccctgc cgtcggacca gcgcgaggcc atcatcctga tcggtgcctc cggcttttcc
     2881 tacgaagagg ccgccgaaat ctgcaattgc gccgtcggca cgatgaagag ccgggtcagc
     2941 cgggcgcgga cgcgcctcca ggatctgctg gggatatccg gcgaggcgga ttacggcccc
     3001 gatgccgtct cggcgcaggt caccacgcac acgctgagct agggctgccg gcgccgggcc
     3061 aacgcctgcc cacacgcgtc gaggagatga tcgtcggcga agggcttgtc gacgatgatc
     3121 gcatcggcga tcgccgtgcc cgcgagccgg gctcgcgagg cggtgcaaac cacgatagcg
     3181 gcgcccgtgg ccgccaaccg gtcgaccacc gaacgttcag ccggatcggg accgggcggc
     3241 gagatgatgg cgagatcgaa gtcggcgagg cccgcgccca gcgctgccac ttcggcaaag
     3301 tttcgggcaa acacggtgcg acgcggatgc gccgtctcga ggatgcgctg gatatccagc
     3361 gcaatcagga attcgtcctc gacgatgaga acgcgttcgc ccaacaacat aacccgatat
     3421 ctccgaagct gtgcggggcg gatttcggcc cggcggggag aagtcgtcat ttaacaatga
     3481 catgtcgccg aggcggcaac tttaacatcg gcgatggcgt ttgccgggga acgcgccgat
     3541 aacgtcagga tcaacagccg gtgagcgtca tcctgcccat ctcgacccgt cgcgtcccgt
     3601 gcgagcaatg tccgctgcgc gcaatgtcgc agttccgggc tttcagtccg gaagagctcc
     3661 ggttcgtctc cagtttcaag cgcggcgaac tggtggccga gcccggcgcc atgatcctcg
     3721 ccgagggcgc gcacagtgcg cagctgttca cgctgctgag cggctgggcc ttccgttaca
     3781 agaccctcga ggacggccgc cggcagatcc tcaactattg cctgcccggc gacctgatcg
     3841 gcctgcaggg ctcggtgatc ggggcgatgg agcattcggt cgaggcgctg tcgccgaccg
     3901 tgctctgcgt attccagcgc gaccagctga acgatttgtt ccgcaatcat cccggcctgt
     3961 cgttcgacat cacctggctg gcgtcgcgcg aagagcggat gctcgacgag aacctgttga
     4021 gccttggccg ccggaccgcc ctggagcggg ccgcgtatct tgtcgcgttc ctctaccagc
     4081 gggcagcggc ggtggggctg accgagcaca gggccctgct gatcccgatc agccagcaac
     4141 atgtggcgga tacgctgggg ctgtcgatcg tccacaccaa caagaccttg cgcaagctgg
     4201 tcgacaagca ggtgatccgc tggcacgacc gggcctgcga ggtgctcgac gcggcggccc
     4261 tcatggagat cgcggcctgg ggcggcctgc tcgagggcga acggccgctg atctagggaa
     4321 ccatcggcgc cgcctgtcgt tccgagcgtg gtcaaggggc agagggcaga caatgcgcgt
     4381 catcggcgta ttgaaccgcg acggcggcac gtttcgaacc atggatatcg acgccttcgc
     4441 cgcgcacgcc gccgaggtgt tcgcggcgca tggccatacg ctcgagacgc ggatcgtcga
     4501 cggtgccggg cttgtcgccg aactcggccg cgccgcgggg gaggcagaca tgctgctggc
     4561 ggggggtggc gacgggacca tctcggctgc ggcggctgcc gcttaccggc gcggcattcc
     4621 gctgggggtg ctgccggccg gcacgatgaa tctcttcgcc cgctcgctgg gcctgccgac
     4681 cgatctcaat gcggccgtcg aagcgctggc ctccggcgac gtgcggacgg tggacatcgc
     4741 cacggcgaac cggcgtccgt tcatccatca gttctcgatc ggcatccatc ccaagctggt
     4801 caagctgcgc gaaacgctga gctaccatgg ccggatcggc aagatgctgg cctcgacccg
     4861 cgccgcgttc ggggtgatct tccggccgcc gagattctac gtcgagctca agacctcgca
     4921 cggcctggag cgtcgctcca ccgcgggaat atcgatctcc aacaacccgt tcgaggaggg
     4981 gcacattccc catgccgagc ggctcgatgc cgggctgctg ggcatctatg tggtcaagcc
     5041 gctgaccccc tgggtgctca tgcggctctg ctggggggtc gtccgcggtc gctggaaggc
     5101 catgccggag gtgatcgacc gggaggcgcg cgaggtgacc atccgcttcc cgcggcgcaa
     5161 atcctcggcg ctggcggtca tcgacggcga gctcatctcg ctgccgcagc aggtcgagct
     5221 ggcgatccat ccaggagcgt tgaaggtggt cgtgccgcgg tccgagccgg tggctgagcc
     5281 ggaaccggcg gcggcctcgc ttgcgctgac gtagcggggc ccgccaggac gtccggcggg
     5341 tcccggctat cgaaaggggc tagaggcttg ccgtccggcc gtcgaccgga tcctggccga
     5401 gcttgcgcag ggcctgctcg atcgacttca ggtcctcgcc atcgtcgcca tcgacaggtg
     5461 tcatgccttc ggtggcgctg cgctccttgc tcagcgaatc cgcctcgagc tggcgcagga
     5521 cctcgatctt ttcgtcatcg gcaagagtgt ggtcggcaag gatcgtcacg atccgccgct
     5581 tgatgtgagt catcgcagat ccctcggttt cgccggtcat ctgggaccgg catcgagaga
     5641 aacggccagg cagggggtgc ggttcctcag cgccgggagc cggggtcggt gcgggtcgaa
     5701 ccaccggatc ggcgcagcat caatgccgac gccagcgccg cgccggcagg gatgccgatg
     5761 tcccggagca gcggcgattt gaggatcagc ggcaaggcgg tgatcgctgc cgtggtcatc
     5821 atcgccgttc gctcggcgct gcgctttcgc tcgagggcac ggcgggcgtc cgcgccatcc
     5881 agaatgtggg tgacgaggac gatcgccacg gcgatcacca cggcggccac ggcgatgatc
     5941 agcggtgcaa tcaccggacc caccgcgtag gtgagtccgg cgttgatggc gacgagcagg
     6001 aagcagatgc cgacgatccc gaggaacgcc acggcgcccc acaggatcgc ctgccgcttc
     6061 aaccggtcgg tcagctccgt cgtttcgagg cccagcagcg agagcagcgg ggccagcatg
     6121 ccgagcatgt tggctaccgc gtgatgacgg cgagcaggaa cccgacggca atggcgccgg
     6181 ccacggcggt cagcggcttc tcgcggatgg tgtccttgat ctgcttttcg aacgccccga
     6241 attcgtcctg ggcgtcggcc agcatcgact ggccccggtc ggcgagttcc tgcgcccggg
     6301 cctgtgccgt ggtgcgcacg ccgtcggcgc cgctctggcc catgcgggtg agggtgcggg
     6361 taacggcccg cagttcgttc tgcagttcgg ccacctggtc ttcgagcgtg ccttcctcga
     6421 cggcgaggtc ggccttggcg cgggcagcgc gactgcggct gcgcgtccgg ccggcggtag
     6481 cgcgagcccg ggtcgccggg cgagttgcgc gagtcgagtt ggctccgctg ggggcggtct
     6541 cttcagtgtc ggccatggga agctcctggg ttggcgctgc gcgggtaacg catcgcgagc
     6601 gttggggttc cagtgtcacg gcggatgccg gacagggcga acaaacaaac accccggttc
     6661 gcgggggagc gaaccggggt ggtttaagcg gaccgaaagg ggggcgacct caggtccgcg
     6721 ttgctcagat ccgtcccatc aaaacgagga tgatgacgat cacgagcacg acgcccaaaa
     6781 tgccggaggg gaagaccccc caggagcggg agtaacccca cctcggcagg gcgccgatca
     6841 gcaagaggat gagaatgacg acgaggattg tgctgagcat cttggcgtac tccttggctg
     6901 acgctttggc gttctagaag gcgacgaaca gcatcgccgc ggcggccgca aggatgccga
     6961 ttgccggcac catggcgccc agcactgcgc cgaaatggat gcgcccgtcg tagccttccg
     7021 gcgaccaggc cagcgcggcc cgtccggcag gctggagggt gttgatctca aatcgtgtca
     7081 tcgcattgat ccttttgtct tttgaccgga agggaggagg accggtctcc gcttggatag
     7141 cccgcgcgtg actgcgctgg ccaaacaacg gagcctcgcg ggagttggtt ccaagccggg
     7201 aaagcagaaa tccgggacgg ctattccacc cggatgacat cgaccgattg cttggtctcc
     7261 tggccgccgc gcgagctgcg cagcatgccc acgatggggg agatatcggt gtagtcgcgg
     7321 ccgtgcccga tggtgatgtg gtcggcgccg gccagcatcg cattggtggg gtcgaattcg
     7381 atccagccgg catgctggcc gcaccagacg cgcacccagg cgtgcatggc gtcggcaccc
     7441 tcgagccgcg cctcgccctt cggcgggatg gtgcgcagga agcccgacac gtaggcggcg
     7501 ggaatgccga cgccgcgcag gccggcgatc atcacctgcg cgaagtcctg gcagacgccg
     7561 cgcctgaggt tgaaggcctc gagcggcacg gtctcgacgt tggtcgattt gcggtcgtag
     7621 gtgaagtcgc ggtggatgcg caggcagaga tccatcgccg cggcccgcac cgacagcgtt
     7681 cggtccatgc tctcgcgggc gtattcggtc agcggccgcg acagcgcgat gcgcggcgaa
     7741 ggggcgagga aatggtgcgg cgagccggaa tcgagcgacc acaggccagc aagctcgcgc
     7801 tgcaggccag cgaggtcggg ggagagatcg gccggcggcg ccgcgtcctc gacgccgacg
     7861 cgggcgctga ggcggacgtc gagccggtcg tgattgccgg cataggcgat ggtggtgacg
     7921 aggttgccga agaagtcgac gaaattggtt tcgctgtcgg gcttgggatc gaatgccagc
     7981 gacgcggcga tgacgcgctg cacgccgggg atcgacgccg gggcgacgcg caccaggtgc
     8041 cggtcgccat gcacgaagcc ctcgtagtcg tagtggagct cgaggcggat gtcgtaaagc
     8101 atcgccacta cgcgaaataa gcgtcggcga taaggtcggc gagccggccg atctcgctgc
     8161 cgagcccggc cagccgttcg ctgctcatgt cctcgggctc ggccacgcgc aattgcgtat
     8221 gcagttgcag cactgccttg gcggtggcgg aaagctggcc gtcgtcgaag ccgccgggca
     8281 ggcgctcgat ctgctcgcgc agctcggcga cctggaacag caccgagcgc gggttgagcg
     8341 catcgagaac aagcaggtcg atgtaggaat tggcgccggc ggcgacgttg tagcggcggc
     8401 gatgggtcat cacgctgtcg ccgatctcca gcagcatgtc gagcgccccg tccggcgctt
     8461 cggcgcgcgt cagccagcgg gtgatgccgg cgatctggat gccgcgttcg aggcggcggc
     8521 cgatctcgag gaaacgccag ccggcgaagc ggtacatgtt ctcgtggacg aggccggaga
     8581 agccggcgag cttgcgcagc agcacggtca tcgcccgcgt cgcgtcgtcg ccgggctgca
     8641 cgcgggcggc aaaattgcgg gccgtcttgc gcaggtcgtt gagcgccagc cagccgtcgg
     8701 gcgagaagcg gtcgcggatc tggctggccg aatgcacggc gctgtcgatg gcgcccagca
     8761 gtccctgcgg cagggtgctg gcggcatcga cgtcgatgct ttcgagatag gtccgggtgt
     8821 cggcaagaag cggcaggtcg ggattggaga cttccgcgag ccgcacgttg taggcgcgca
     8881 ggatgcgcac cgtggcctcg cagcgttcgg catagcggcc gagccagatg aggttgtcgg
     8941 cggcgcggct cggcaggtcg cctacggcct ggcggacaag cttttcgccc tgctgcgaca
     9001 gcagcgtgac ccgctcgacg ggcttcgagc tcaccaccca gacgtccgcc gcctggccgc
     9061 cgcgctgcat cgcgatggcg gcggtatcga ggctcgagcc gacgcgcgcg aacccgccgg
     9121 gcatgatggt ccagcccttg gcggtgcgtg ccgcgtagac gcgcagcgtg atcggccgcg
     9181 gttcaagctt gccgtcggca tagagcggcg ccgtcgacag cgtcaccggc tcctggccga
     9241 cgaactggcc acccttttcg gccagtaccc gccggagcgc ctcgcgcggg ccgggctcga
     9301 gcgtcgagcc gagcatggtc gattcgcggt cctcgatcgg cagcacggtc gagaaggccg
     9361 gtccgatcat catgcgatcg aaattgtcga ggacgtgctg gcgctcggcg ggctggccgc
     9421 accaccaggt ggcgatcgtc ggcagctccg gcgcagtccc cagcaacgcc tcgctcagcc
     9481 gcggcatgaa cgcggcgaag gcgcgggtct cgaggatgcc ggagccgatg gcgttgacca
     9541 tcgagatcga tccctgccgc agcgcctcgg tcatgccggg ggtgccgatg cggctgtcgt
     9601 accgcagttc cagcgggtcg atgaagctcg cgtccatgcg ccgccacagc acgctcaccg
     9661 gcttcagccc ggagacggtc cgcaccatca cctcgccgcc ctcgatcacc aggtcctcgc
     9721 cttcgagcag cgtgaagccg aggtagcggg cgatgtaggc gtgctcgaaa taggtctcgt
     9781 tgtgctggcc gggagtcagg atgccgaccc ggccgccatt gcgccgcgct tcgccgttca
     9841 gcgcatcgcg gaaatcgcga aagaagccgg cgagccggtg cacatgcatc ctcgaataga
     9901 tgtcggagag cgcgcgcgtg gtggcgacgc ggttctcgag cgcaaagccg gcccccgagg
     9961 gcgcctgcgt gcggtcgccg agcacccacc agccgccatc gggtccgcgc ccgagctcga
    10021 aggcgcaaaa gtgcaggtag tgcccgctgg ccggcttgat accgaccacc ggacggagga
    10081 attccggatt gcgggcgacc agttccggcg gcagcacgcc acgggcgacg aggtggttgt
    10141 cgccatagat gtcggcgacg atgcgctcga gcagttccgc ccgttgcgtc aggccgcggg
    10201 tgatctgcag ccattcggtt tcgtcgatga ccagcggcac gtgcgccagc ggccaggccc
    10261 gctccttgcc ggccgcgctg tcgtatttgc ggtagaacac cccggcgtcg cgcagatact
    10321 ggtcggcgcg ctcgaagcgg gcagtcaggc cttcggggcc aagttcgtcg aagccggcaa
    10381 gcaactgact ccagccgggt cggatgttgc cggccgcatc gatcatttcg tcgggaatgg
    10441 agggtaacag cttatagttg gcgatcagcc cggtggtccc cggctttttc gaactctgac
    10501 gctgcattcg cttgtccatc ggtgcgctag cgctaccgca agcacacgga atcgcaagcg
    10561 gattttggcc cgaaggtcaa aaggcgctgg gagtttccgg cggcgctgcc aatgcgtcgg
    10621 cgacacggct ggcgatgcga taactccgtg gcgccgttcc ggtgacgcgc ttgaaggcgt
    10681 tggagaaggc gctttccgac ccatacccca gccggtaggc gaggcccgat accagtacgt
    10741 cggactggcg gaggtcgcgc tcagcgaggt gcatgcgcca ccgggtcagg taagccaggg
    10801 gagcgatccc gacgaccgcc ctgaagcgct gggcgaagcc ggtgcgagac atgccagcgg
    10861 ctttcgccag ctcgatcagt gtccaggtcc gcgccgggtc ggcgtggatt agcccgagga
    10921 tgg
//
LOCUS       DATAZA010000515         6186 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3100741, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000515 DATAZA010000000
VERSION     DATAZA010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6186
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3100741"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            383..1561
                     /locus_tag="VHZ56_12820"
     CDS             383..1561
                     /locus_tag="VHZ56_12820"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX4298895.1"
                     /translation="MRYVGKVATIAILAGAAALASGSIASAAGLSASDLAAGGGQDAT
                     FAKLSAMKDVAAAGKGKIAVLLPDTQSSARWAGVDAPGFDAAFKAMGLTADDYTIVNA
                     QGSPQTQQTQAEQAITQGASVIVIANLDSGSAAAIQQEAKAQGITSIDYDRLTLNGSA
                     SYYVSFDNVAVGKLQGEGLVQCIKDWNVQNPQIFELGGSPTDNNATLFEQGYDSVLQP
                     LYDAKTATLVARIRVPNWDNQQGATMFQQALQANPQINAVLSANDGLGQSAISILKNN
                     KVPPKTVPTTGQDATLQGAQNILAGYQCMTVYKPIYEEVAGAAVLAVLARAGQTPDPS
                     LLNGSVDATSHKTPSLLLTPQSVNAANMESTVIADKFLDPAQICSGDFAAACTAAGVK
                     "
     gene            1649..2443
                     /locus_tag="VHZ56_12825"
     CDS             1649..2443
                     /locus_tag="VHZ56_12825"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4298896.1"
                     /translation="MADTPLLEIRDLRKHFAAVQVLRGVNMSVRAGKVTALVGDNGAG
                     KSTLIKCLAGIYQPDGGQIIWDGHPVSVPNPKAASAIGMEFVYQDLALCNNLDIVQNM
                     FLGRERRRGIFLDGEAMEDAARETLAGLNVTTIRSIRQQVSSLSGGQRQSVAVAKSVM
                     WNSKMVVLDEPTAALGVAQTAQVLALVRRLADRGLAVIIISHNLEDVLKVADSIAVLR
                     LGVLVAQPDKADVSSRELVELITTGRSGTRFPGTPVAPAAPAVPQI"
     gene            2457..3749
                     /locus_tag="VHZ56_12830"
     CDS             2457..3749
                     /locus_tag="VHZ56_12830"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX4298897.1"
                     /translation="MTDNQPAATPTPAPEAAALLGGGIPEAAAITSSSTLTEYFRNWL
                     VRVRAGDTGALPVIAGLILLAVIFQSLNGNFLTAGNLVNLMVQGSVYMLFALGMIFIL
                     LLGEIDLSIGFIGGVAGVVMALLTFGNSGLPWYVGVAAGLLCSIGIGLLNGVIITAIG
                     LPSFIVTLAGLLAWNGVMLIILGNGGTIPINDETINNLANGLLDPIVSWIVLAVMLAL
                     YIADQVLSARARKHSGVPRSVTILKIAGVIVAGLIVVAICNTNRGRVSPIEGVPWVLL
                     IVFFFATLWTVVQQRTRFGTYIYAIGGNAEAARRAGIAVNRIRIAGFTIAGFMGGVAG
                     IIYASRLRSVSTNLDGGQLVLYCIAAAVIGGTSLFGGRGKAISAILGGLVIASIDNGM
                     GLLGLAAATRYVVTGIVLVVAVTIDALASRGRASSGLS"
     gene            complement(3806..4213)
                     /locus_tag="VHZ56_12835"
     CDS             complement(3806..4213)
                     /locus_tag="VHZ56_12835"
                     /inference="COORDINATES: protein motif:HMM:NF023178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3307 domain-containing protein"
                     /protein_id="HEX4298898.1"
                     /translation="MADLFVLALLGHLVGDYLLQSKQMALGKSARGWRGILLCTAHAA
                     IYTAAVCAFWWTLDPVVAALVFVPHWIIDRWSLATPWLKLIGGRTFESALQSTGPARE
                     FDVAFTSLVYAVTDNTMHLLCLWLVIRFVLLRG"
     gene            4414..5229
                     /gene="mazG"
                     /locus_tag="VHZ56_12840"
     CDS             4414..5229
                     /gene="mazG"
                     /locus_tag="VHZ56_12840"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HEX4298899.1"
                     /translation="MQPSRDISRLLEIMAALRNPDGGCPWDLEQDFASIRHYTIEEAY
                     EVADAIERQDYGDLRDELGDLLLQPVFHAQMASETGLFDFGDVVQAITEKLIRRHPHV
                     FGEAAATAAGQSATGVRLQWDEIKAGERAGKAARNAAPSSVLDDVAQTLPALARAEKL
                     ARRAATVGFDWPDVDAVTAKVTEELAEIRDAVTPEQKHEEIGDLLFAVANLARHLGVD
                     PEAALRDANAKFIRRFHYVEARAGADGIPMAEAGLPRLDGYWNEIRAADKAGG"
     gene            complement(5230..>6186)
                     /gene="hflX"
                     /locus_tag="VHZ56_12845"
     CDS             complement(5230..>6186)
                     /gene="hflX"
                     /locus_tag="VHZ56_12845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEX4298900.1"
                     /translation="VTREGVLQVELAHLNYQRSRLVRSWTHLERQRGGFGFLGGPGET
                     QIESDRRLLEERIKLLEERLDKVKRTRGQQKARRDEAQYPMVALVGYTNAGKSSLFNR
                     LTGAGVFAENLLFATLDTTLRKLELPHGRAAMLSDTVGFVADLPTTLVAAFRATLEEV
                     IDADLILHVRDVASPDSAAQAADVLKVLGELGVEADKTPIIEVWNKIDLLGPDAAARE
                     ALETVRPAGTVAATVPVSATTGEGAEHLLETIEATLAAKSRSYRVRVPHANGADVGWL
                     YGHAEIIARDEPDEEGQTYEVRVDPRHSASFAQRFAGRIEAA"
BASE COUNT         1011 a         2232 c         1930 g         1013 t
ORIGIN      
        1 ctcgccgccg tggagcggtt ccggccacgc gaggctatcc tcaccaacct ccacatcgac
       61 ctcgactacg accgcaccgc agcgacgacc ccgaggtacg tacatccggc ctacgatgga
      121 atgcgcgtaa atgtgaccga ggggcgcttg ctgaccccag cctgacttgc cagcgctgtc
      181 atccgcggaa atccttgaga tcgattacat gtgcccctga ataatcacat ttttcgaagc
      241 cggggagtgg ctaacccgcc atttaaatcg ataccatttt tcgacgcgcc gcgttgacag
      301 ccgcatgtcg cccgttgata acacgcccgt tctttgtgca ccgtcgagaa gatttggagt
      361 tgcacaaacg ggaggacaac acatgcgtta cgtaggaaaa gttgcaacta tcgctatcct
      421 ggccggcgcc gctgcgcttg cgtcgggttc gatcgcttcg gccgccggcc tgagcgcttc
      481 cgacctggcg gccggtggtg gccaggacgc gacctttgcc aagctctcgg ccatgaaaga
      541 cgtggccgcc gccggcaagg gcaagatcgc ggttctgctg cccgacaccc agtccagcgc
      601 gcgctgggcc ggcgtcgacg ccccgggctt cgacgcggcg ttcaaggcca tgggcctgac
      661 tgccgacgat tacaccatcg tcaatgccca gggctccccg cagacccagc agacccaggc
      721 cgagcaggcc atcacgcagg gcgccagcgt catcgtgatc gccaacctcg actccggttc
      781 cgccgcggcc atccagcagg aagccaaggc tcagggcatc acctcgatcg actatgaccg
      841 cctgaccctc aacggctccg cctcgtacta tgtcagcttc gacaacgtcg ccgtcggcaa
      901 gctgcagggc gaaggcctcg tccagtgcat caaggactgg aacgtccaga acccgcagat
      961 cttcgagctc ggcggttcgc ccaccgacaa caacgccacg ctcttcgagc agggctacga
     1021 ctcggtgctg cagccgctct atgacgccaa gactgccacg ctcgttgcgc gcatccgcgt
     1081 tccgaactgg gacaaccagc agggcgctac gatgttccag caggctctgc aggccaatcc
     1141 gcagatcaat gcggtgctct cggccaatga cggcctcggc cagtcggcga tctcgatcct
     1201 gaagaacaac aaggttccgc cgaagaccgt gccgaccacc ggccaggacg cgaccctgca
     1261 gggtgcccag aacattctcg ctggctacca gtgcatgacc gtctacaagc cgatctatga
     1321 ggaagtcgcg ggcgccgcgg ttctggcggt tctcgcccgt gccggccaga ccccggatcc
     1381 gagcctgctg aacggttcgg tcgacgcgac gagccacaag accccgtcgc tgctgctgac
     1441 cccccagtcg gtcaacgccg cgaacatgga gtcgacggtt atcgccgaca agttcctcga
     1501 cccggcccag atctgctcgg gtgacttcgc cgcagcctgc acggccgccg gcgtcaagta
     1561 aggatcattt gatcccggtt cgtcgcccgg ttcccttgcg gaccgggcga cgccttgttt
     1621 caatgcgcag gctgcgctcg ggggggccat ggccgatact ccactgctcg aaatccgcga
     1681 tctgcggaag catttcgccg ctgtccaggt gcttcgcggc gtgaacatga gcgtgcgggc
     1741 aggcaaggtc accgccctcg tcggcgacaa cggcgccggc aaatccaccc tcatcaagtg
     1801 cctcgcaggc atctatcagc ccgacggcgg acagatcatc tgggacggcc acccggtcag
     1861 cgtccccaac ccgaaagccg cctcggcgat cggcatggaa ttcgtctacc aggacctggc
     1921 gctctgcaac aatctggata tcgtccagaa catgttcctc ggccgcgagc gccggcgcgg
     1981 catcttcctc gacggcgaag cgatggagga cgccgcccgc gagacgctcg ccgggctgaa
     2041 tgtcaccacc atccgttcca tccgccagca ggtctcgagc ctgtcgggcg gccagcgcca
     2101 gtcggtcgcg gtcgccaaat cggtgatgtg gaattccaag atggtcgtgc tcgacgagcc
     2161 gaccgcggcg ctcggcgtcg cccagaccgc gcaggtgctg gcgctggtac ggcgcctggc
     2221 cgaccgcggg ctggccgtca tcatcatctc gcacaacctc gaagacgtgc tgaaggtggc
     2281 ggactcgatc gccgtcctcc gcctcggggt gctcgtcgcg cagcccgaca aggccgacgt
     2341 gtcgagccgc gagctcgtcg aactcatcac caccggccgc tcgggaaccc gcttccccgg
     2401 cacgccggtc gcacccgcgg cccccgcggt tccgcagatc tgagggggag ggacccatga
     2461 ccgacaatca accggccgcc acgccgacgc ctgcccccga agccgccgct ttgctcggcg
     2521 gcggcattcc cgaagccgca gccatcacca gcagcagcac gctcaccgag tatttccgca
     2581 actggctggt ccgcgtccgg gcgggcgata ccggcgcgct gccggtcatc gccgggctga
     2641 tcctgctggc ggtcatcttc cagagcctca acggcaactt cctcaccgcc ggcaacctcg
     2701 tgaacctgat ggtccagggg tcggtctaca tgctgttcgc gctcggcatg atcttcatcc
     2761 tgctgctggg cgagatcgac ctgtcgatcg gcttcatcgg cggcgtcgcc ggcgtcgtca
     2821 tggcgctgct gacgttcggc aacagcgggc tgccctggta cgtcggcgtc gccgccggcc
     2881 tgctctgcag catcggcatc gggctgctca acggcgtcat catcaccgcc atcgggctgc
     2941 cgtccttcat cgtcacgctg gccggcctgc tggcctggaa cggcgtgatg ctcatcatcc
     3001 tgggcaatgg cggcaccatc ccgatcaacg acgaaaccat caacaacctc gccaacggcc
     3061 tgctcgaccc catcgtcagc tggatcgtgc tggcggtgat gctggcgctc tacatcgccg
     3121 accaggtgct ctccgcgcgg gcccgcaagc attccggcgt gccgcgcagc gtcaccatcc
     3181 tgaagatcgc cggcgtcatc gttgccggcc tgatcgtggt cgctatctgc aacaccaacc
     3241 gcggtcgcgt ttcgccgatc gaaggcgtgc cgtgggtgct gctgatcgtg ttcttcttcg
     3301 cgacgctctg gaccgtcgtg cagcagcgca cccgcttcgg cacctacatc tacgccatcg
     3361 gcggcaacgc cgaggcggcg cgccgcgccg gtatcgcggt caaccgcatc cgcatcgccg
     3421 ggttcaccat tgccggcttc atgggcggcg tcgccggcat catctacgca tcgcgcctgc
     3481 gctcggtgtc gaccaatctc gatggcggcc agctggtgct ctactgcatc gcggcggcgg
     3541 tcatcggcgg caccagcctg ttcggcggcc gcggcaaggc gatcagcgcc attctcggcg
     3601 gcctcgtcat cgcctcgatc gacaacggca tgggcctgct gggcctcgcg gccgcaaccc
     3661 gctacgtcgt caccggcatc gtgctcgtgg tcgcagtgac catcgacgcg ctcgccagcc
     3721 gcggccgcgc ctcgtccggc ctcagctgag gccggtgccg ccgctgcacg cacgaaggcc
     3781 gggcccagcg tccggccttg tcgtttcagc ctcgcagcag cacgaagcgg atcaccagcc
     3841 acaggcagag caggtgcatc gtattgtcgg tcaccgcata gaccaggctg gtgaacgcca
     3901 cgtcgaactc ccgggccggc ccggtggact gcagggcgct ctcgaaggtc cggccaccga
     3961 tcagcttcag ccacggcgtc gccagcgacc accgatcgat gatccagtgc ggcacgaaga
     4021 cgagggcggc gaccaccgga tcgagcgtcc accagaaggc gcagaccgcg gccgtgtaga
     4081 tcgccgcatg cgcggtgcag aggaggatgc ctcgccaacc gcgtgccgat ttgccgagcg
     4141 ccatctgctt gctctgcagc agatagtcgc cgaccagatg gccgagcagc gccagcacga
     4201 acaggtctgc catctctgat cctccatcag ggccgcccag cgttggccgg gccgcaatat
     4261 gcatcaaatc caacgctccc ggtgttctcc ggcatcatca aaatgttcca taatatatct
     4321 tatgcgaatg actgatgcgc ggagacccgg tggtccggct gctctcgacg ggctaccctg
     4381 cgaacgctct cctcccgatt ccggatattt gccatgcagc cgtcccgcga catctcccgc
     4441 ctgctcgaga tcatggcggc gctgcgcaat ccggacggcg ggtgtccgtg ggatctggaa
     4501 caggacttcg cctcgatccg ccactacacc atcgaggaag cctacgaggt tgccgacgcg
     4561 atcgagcgcc aggactacgg cgacctccgc gacgaactcg gcgacctgct gctgcagccg
     4621 gtgttccacg cccagatggc gtcggagacc gggctcttcg atttcggcga cgtcgttcag
     4681 gccatcaccg agaagctgat ccgccggcac ccgcacgtct tcggcgaggc agcggctacg
     4741 gccgcgggcc agagcgccac cggcgtccgc ctgcagtggg atgagatcaa ggcgggcgag
     4801 cgcgccggca aggccgccag gaacgccgca ccgtcctcgg tcctggacga cgtcgcgcag
     4861 accctgccgg ccctcgcccg tgccgagaag ctggccaggc gtgcggcaac cgtcggcttc
     4921 gactggcccg acgtcgatgc agtgaccgcc aaggtgacgg aggaactggc cgaaatccgc
     4981 gatgcggtca cgcccgagca gaagcacgag gagatcggcg acctgctctt tgccgtcgcc
     5041 aacctcgcgc ggcacctggg cgtcgacccc gaggcggcct tgcgcgacgc caacgccaag
     5101 ttcatccgcc gcttccacta cgtcgaggcg cgcgccggcg ccgacggcat ccccatggcc
     5161 gaagccgggc tgccccgcct cgacggctac tggaacgaaa tccgcgccgc ggacaaggcc
     5221 ggcggctgat caggccgcct cgatccgccc cgcaaaccgc tgcgcgaagc tcgcgctgtg
     5281 ccgcgggtcc accctcacct cgtaggtctg gccttcctcg tccggctcgt cgcgggcgat
     5341 gatctcggcg tggccgtaga gccagccgac atcggcgccg ttcgcgtgcg gcacgcgcac
     5401 ccggtagctc cggcttttcg ccgccagcgt cgcctcgatc gtctcgagca ggtgctcggc
     5461 gccctcgccc gtcgtcgccg aaaccggcac cgtcgccgcc accgtgcctg ccggccggac
     5521 cgtctcgagc gcctcgcggg cggccgcgtc cgggccgagc aggtcgatct tgttccagac
     5581 ctcgatgatc ggcgtcttgt cggcctcgac gcccagttcg ccgaggactt tcagcacgtc
     5641 ggcggcctgc gccgcgctgt ccgggctggc gacgtcgcgg acgtgcagga tcagatcggc
     5701 gtcgatgacc tcctcgagcg tggcccggaa agcggcgacc agcgtcgtcg gcaggtcggc
     5761 gacgaacccg accgtgtcgg agagcatcgc ggcacggcca tgcggcaact cgagctttcg
     5821 cagtgtcgta tcgagcgtcg cgaacagcag gttttcggcg aacacccctg ccccggtcag
     5881 gcggttgaac aggctggact ttccggcatt ggtgtagccg acgagcgcca ccatcgggta
     5941 ctgcgcctcg tcgcggcggg ccttctgctg gccacgcgtc cgcttcacct tgtcgagccg
     6001 ctcctccagc agcttgatgc gctcctcgag cagccgccgg tcgctctcga tctgcgtctc
     6061 gccggggccg ccgaggaagc cgaagccgcc gcgctgccgc tcgaggtggg tccacgaccg
     6121 caccagccgg ctgcgctggt agttgagatg cgccagctcg acctgcagca cgccttcgcg
     6181 cgtgac
//
LOCUS       DATAZA010000516         2323 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3101822, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000516 DATAZA010000000
VERSION     DATAZA010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2323
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3101822"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..1183
                     /gene="cpaB"
                     /locus_tag="VHZ56_12850"
     CDS             113..1183
                     /gene="cpaB"
                     /locus_tag="VHZ56_12850"
                     /inference="COORDINATES: protein motif:HMM:TIGR03177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HEX4298901.1"
                     /translation="MLRRNQSNAAEIETEEPAEAPVEVERSAPPRVERRKTERRGMDQ
                     LRSEALKAVISQVEDRNFGGLRNGRQGISWMSRIKPSRIALLLVALVAGGVAAYLSTQ
                     HEAPATVTTPVQQVVQEARTQILVARTAIGIGQKLTPDDMQWQDWPEGAVIPQYVSIA
                     ATPDGLAKTTGAVARFEIFPGEPIREDKLALPGSGYMSAVLDSGMLGVSVSVAAESAS
                     GGFIVPNDHVDVVLTRANDAGGQVSETIVRNVRVLAINARLGETGTTGAPANTGATAG
                     ADASASGGDASSTVFGDKAIATLELDPTQAQMVINGTSQGKLSLELRAMSDYGDKSAQ
                     SGAVNAAIRLSSPFWTESSKPQ"
     gene            1302..>2323
                     /locus_tag="VHZ56_12855"
     CDS             1302..>2323
                     /locus_tag="VHZ56_12855"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein N-terminal
                     domain-containing protein"
                     /protein_id="HEX4298902.1"
                     /translation="MAFGRKLLSRITAPARRMIALGRLLGAILVLGIGVATTAPALAQ
                     TVNYDLSTTSVMRIKLPVSQAVTVTLSAAVGKIVSADPKIADAQPITDTSVYLVGKAF
                     GTTTVNLYSADGTPVGLLAVEVGADTADMSHSIRSGVPNSRVKVSTVNGRVQLSGTVP
                     DADSMQKVLDIVNQYGSPAVINTITLTGGQQVNLEVRILEAQRDAGRELGISWNGTGT
                     GGSATISGGPNNPSSDATSFSTFITNIITGGVGFNLSATINALETKGLVRTLADPNLT
                     TLSGINASFLAGGQVPIRVPDANGNATLNFHDFGVKLVFTPVVLDGDRIQIHLTPEVS
                     DVTGFTT"
BASE COUNT          406 a          783 c          795 g          339 t
ORIGIN      
        1 ggatttgccc ggcttttgga acccgaaagt gaggcttggc accgtattga tacgaggcac
       61 cgcggctcat cgggcccggc atgacgggca ggtcatatcc cacgaggaac aagtgctgcg
      121 gcgtaaccag tccaatgcgg ccgagatcga aaccgaagag ccggcggagg ctcccgtcga
      181 ggtcgagcgc agcgcgccgc cgcgggtcga gcggcgcaag accgagcggc gcggcatgga
      241 ccagctgcgg tccgaggcgc tcaaggcggt gatctcgcaa gtcgaggacc gcaatttcgg
      301 cggcctgcgc aatggccggc agggcatttc gtggatgagc cggatcaagc cgtcgcgcat
      361 cgcgctgctg ctggtggcgc tcgtcgccgg cggcgtcgcg gcctatctca gcacgcagca
      421 cgaggcgccg gccacggtga cgacgccggt gcagcaggtg gtgcaggaag cccgcaccca
      481 gatcctggtc gccaggaccg ccatcggcat cggccagaag ctgacgccgg acgacatgca
      541 gtggcaggac tggccggagg gtgcggtgat cccgcaatac gtgtcgatcg cggcaacgcc
      601 cgacggtctt gccaagacca ccggcgcggt ggcgcgcttc gagattttcc cgggcgagcc
      661 gatccgcgag gacaagctgg cgctgcccgg cagcggctac atgtcggcgg tgctcgacag
      721 cggcatgctc ggggtgtcgg tttcggtggc ggcggaatcg gcctccggcg gcttcatcgt
      781 tcccaacgac catgtcgacg tggtgctgac ccgcgccaac gatgccggcg gccaggtgtc
      841 ggagacgatc gtgcgcaacg tgcgggtgct ggcgatcaac gccaggctgg gcgagaccgg
      901 caccaccggc gccccggcca acaccggcgc cacggccggc gccgatgcat cggcgagcgg
      961 cggcgacgcc tcgagcacgg tgttcggcga caaggcgatc gcgacgctgg agctcgaccc
     1021 gacgcaggcg cagatggtca tcaacggcac ctcgcagggc aagctgtcgc tcgagttgcg
     1081 ggcgatgagc gactatggcg acaagagcgc gcaatcgggt gcggtcaatg ccgccatccg
     1141 cctgtcgagc ccgttctgga ccgagtccag caagccgcag tgagcggcgg cagccgatcg
     1201 gcgcaaagcg gaatcgggtt ccatcctcag tgttaagccg atgttgacgc tggactgcta
     1261 agacgggccg gttcggggca attgtcagca aagcgtcgag attggctttc ggtcgcaaac
     1321 ttctcagccg gatcacggca ccggcgcggc ggatgatcgc gctcggccgc ctgctcggcg
     1381 cgatcctggt gctcggcatc ggcgtggcca cgacggcacc ggcgctggcg cagacggtca
     1441 actacgacct cagcaccacc tcggtgatgc ggatcaagct gccggtgtcg caggcggtga
     1501 cggtgacgct gtcggccgcg gtcggcaaga tcgtctcggc cgaccccaag atcgccgacg
     1561 cgcagccgat caccgacaca tcggtgtacc tggtcggcaa ggccttcggc acgacgacgg
     1621 tcaacctcta ttcagccgac ggcacgccgg tgggattgct ggcggtcgaa gtgggcgccg
     1681 acaccgccga catgtcgcat tcgatccggt ccggggtgcc caactcccgg gtcaaggtga
     1741 gcacggtcaa cggccgggtg cagctttcgg gcacggtgcc cgacgccgac tcgatgcaga
     1801 aggtgctcga catcgtcaac cagtacggca gcccggcggt gatcaacacg atcacgctga
     1861 ccggcggcca gcaggtcaac ctcgaggtgc gcatcctcga ggcgcagcgc gacgccggac
     1921 gcgagctcgg catcagctgg aacggcaccg gcaccggcgg ctccgccacc atctccggcg
     1981 gccccaacaa tccgtcctcc gatgcgacct cgttctcgac cttcatcacc aacatcatca
     2041 ccggcggcgt cggcttcaac ctcagcgcga cgatcaatgc gctcgagacc aagggcctgg
     2101 tccgcacgct ggccgatccg aacctgacga cgctgtcggg catcaacgcc agcttcctcg
     2161 ccggcgggca ggtgccgatc cgcgttcccg acgccaacgg caacgcgacg ctcaatttcc
     2221 acgatttcgg cgtcaagctg gtgttcacgc ccgtcgtgct cgacggcgac cgcatccaga
     2281 tccatctgac gccggaggtc agcgacgtca ccggcttcac cac
//
LOCUS       DATAZA010000517         1536 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2751182, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000517 DATAZA010000000
VERSION     DATAZA010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2751182"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..776)
                     /locus_tag="VHZ56_12860"
     CDS             complement(<1..776)
                     /locus_tag="VHZ56_12860"
                     /inference="COORDINATES: protein motif:HMM:NF014051.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEX4298903.1"
                     /translation="MGLSYIGSGGSLITSAIAQLITFAILARSLGADQFALYVTITAF
                     TNVAVQVCGLGVQECLVRRIARDPADYPRMMGHSLILTFGTGGILLVVGLAVLPFITP
                     TSSNLWVNFGTITLLMISTVIVLRLVSLATSTYIARNNFVVANSMEFGFGLIRMVAAI
                     VGCLIFHVTTVAAWSVWFFAAHFIVAMVAVVLIRRLGRPRYELVREELRIGVLFSTQF
                     IFKAVRQNTDILVLGLLTTPEIVSSYGVARRVLDSSFLSI"
     gene            1000..>1536
                     /locus_tag="VHZ56_12865"
     CDS             1000..>1536
                     /locus_tag="VHZ56_12865"
                     /inference="COORDINATES: protein motif:HMM:NF014732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /protein_id="HEX4298904.1"
                     /translation="MYSTLDSGDPRQPSGLSRLARRDLPSTPRVPGLAVPADEAVRWP
                     SLTLDATLRWARGGIVWIIVLAVTGAAAGYGYSILAKPKFTASTDLIVDPGNLQLVKT
                     DLYPAAYDQNAQLLDAESKLRVVTSGNVLKRVVEQMNLQNDPEFQQAHSGFDFLSGAA
                     PAATSLDPVETAIDVLDKD"
BASE COUNT          324 a          446 c          522 g          244 t
ORIGIN      
        1 tcgatcgaca ggaacgaact gtcgagcacg cggcgggcga cgccgtagct ggagacgatc
       61 tcgggcgtgg tgagcaggcc gaggaccagg atgtcggtgt tctggcggac ggccttgaag
      121 atgaactggg tcgaaaacag cacgccgatg cgcagctcct cgcgcaccag ctcatagcgc
      181 ggccggccga ggcgccggat gagtaccaca gcgaccatgg cgacgatgaa atgggcggca
      241 aagaaccaga cagaccaggc ggcaaccgtg gtgacgtgga agatgaggca gccgacgatc
      301 gccgcgacca tgcggatcag cccgaagccg aattccatgg aattggcgac gacgaaattg
      361 ttgcgcgcga tgtaggtcga ggtggcgagc gagaccagcc gcagaacgat aacggtgctg
      421 atcatcagca gcgtgatggt gccgaaattg acccacagat tgctcgatgt cggggtgatg
      481 aagggcagga ccgcaaggcc gacaacgagg agaataccgc cggtgccgaa ggtcaggatc
      541 aggctgtgcc ccatcatgcg ggggtagtcg gccggatcgc gggcgatgcg gcgcacgagg
      601 cactcctgca ccccgagccc gcagacctgg acggcgacgt tggtgaaggc ggtgatggtg
      661 acgtaaagcg caaactggtc ggcgccaagc gagcgggcga ggatggcaaa ggtgatgagc
      721 tgggcgatcg cggacgtgat caggctgccg cccgagccga tatagctcag acccattgga
      781 acaagcttct ttaaaatatt gttcaaatgc ttcacgtcct cgccgggagc catggcgcaa
      841 tcgctctctt ggcatggccg gcacgacgcc gcgaaaacat cgtttcaaag cggttaacag
      901 gcgcgacgag gttaaccaat tcttaggaac tgagcggaag cacggcatcg atgctcctat
      961 aaagctccag tatcagcttg atcggcgcgg acctgcggca tgtacagcac actcgattcc
     1021 ggtgaccccc gccagccctc cggcctttcc cggctggctc gccgcgacct gccgtcgacg
     1081 ccgcgggttc cggggctggc cgtcccggca gacgaagcgg tgcggtggcc gtcgctgacc
     1141 ctcgatgcga cgctgcgctg ggcgcgcggc gggatagtgt ggattatcgt tctggctgtg
     1201 acgggagctg cggcgggcta cggatactcg atcctcgcga agccgaaatt caccgcctcg
     1261 acggacctca tcgttgatcc gggcaacctg cagctggtga agaccgatct ctatccggca
     1321 gcctacgacc agaacgccca gctgctcgat gccgagagca agctcagggt ggtgacgtcg
     1381 ggcaatgtgc tgaaacgcgt ggtcgagcag atgaacctgc agaacgatcc ggaattccag
     1441 caggcgcaca gcggtttcga cttcctcagt ggtgccgctc cggcggcgac ctcgctggac
     1501 ccggtcgaga cggcgatcga tgtgctcgac aaggac
//
LOCUS       DATAZA010000518         4493 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2288345, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000518 DATAZA010000000
VERSION     DATAZA010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4493)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4493)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4493
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2288345"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..198
                     /locus_tag="VHZ56_12870"
     CDS             <1..198
                     /locus_tag="VHZ56_12870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007347758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEX4298905.1"
                     /translation="MKGQGYGGGYIYDHDTPEAFSGQEYFPEKLGRQNFYRPVERGFE
                     REIRKRLEYFSRLRAKRKEEK"
     gene            complement(234..635)
                     /locus_tag="VHZ56_12875"
     CDS             complement(234..635)
                     /locus_tag="VHZ56_12875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298906.1"
                     /translation="MTFLSFKQALGLGAAIVVLSAGGAFAADTLDSNTTLMSGPGDNF
                     KTIGKLQAGQDVAVSTQQNSWCRITAPNRGWIPCSDITGLTTADITPVAPAATWSGYD
                     FSTDPYLGPEAGGFHANSDPSHNGNKKSGSH"
     gene            819..1199
                     /gene="crcB"
                     /locus_tag="VHZ56_12880"
     CDS             819..1199
                     /gene="crcB"
                     /locus_tag="VHZ56_12880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008122996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEX4298907.1"
                     /translation="MNPYLLVAVGGALGSMARYGTGVLVGRAWDAAFPLGTMLINIAG
                     SLAMGLFIGFLARTTPSWQGDARLFVAVGVFGGFTTFSSFSLDSIAMVERGEIGQAIL
                     YVLVSVVVGIAALYAGLVVMRGTA"
     gene            1196..2182
                     /locus_tag="VHZ56_12885"
     CDS             1196..2182
                     /locus_tag="VHZ56_12885"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006936414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEX4298908.1"
                     /translation="MSGVRQQAVARDEDGMRLDRWFGVHFPDVTFGHLQKLIRTGQVR
                     IDSGRAKTSSRLVAGQLVRVPPLEAEVRRIEQKIDAADAAFLRDLMLYEDDELYVFNK
                     PHGLASQGGSGTKRHMDGLLKSLPNKQGEAPRLVHRLDRDTSGVLVVAKTRAAASYLG
                     KVFQSRSARKIYWAVVYGNPKPPQGSISCFLAKQIVDGSEQMVVVEQNHPAAQHSMTY
                     YSTTDVAARRFAWVTLKPVTGRTHQLRVHMAQLGNPIMGDPRYFNIENFQGAPGLGEG
                     LQLHARRIRLPLENGKTLDVSAPLPPHIVQSFEALGFNADRYDARDQDPEDA"
     gene            2175..2951
                     /locus_tag="VHZ56_12890"
     CDS             2175..2951
                     /locus_tag="VHZ56_12890"
                     /inference="COORDINATES: protein motif:HMM:NF019180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043461 - proton-transporting ATP synthase
                     complex assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP12 family protein"
                     /protein_id="HEX4298909.1"
                     /translation="MREFLEDAEGHRDDGYGRAQAHAKRQLPKRFYAEAAVKAVEGGY
                     AVGLDGRVPKTPGMKPVVVPSEAVAQAMAAEWAAQAELIDPQTMPLTRIVNSAVEAGD
                     DAIPGLRAEIVRYAGNDLLLYRADAPETLVRRQEDVWDAVLVKLARHFDIKFQPTIGV
                     VHQAQPAPTLARLDAALGAEEVLPLAALNVLTSITGSGLLAIAHRAGLIDAETMWAAA
                     HVDEDHNIALWGEVEEITVRRAQRRSEFDAAVRLLALPAR"
     gene            3305..3985
                     /locus_tag="VHZ56_12895"
     CDS             3305..3985
                     /locus_tag="VHZ56_12895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015343369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX4298910.1"
                     /translation="MPRILIADDEPNIREVISFALERAGHATLSARTGAEALQLFRRG
                     PVDLIILDIGMPEMDGLEVCRQVRKSSDVPILFLSARDEEIDRVLGLEIGGDDYVTKP
                     FSTREMVARVNVILKRARGGTKVPPAVSHGRVRLDASRHAVWFGESVVALTALEFEIL
                     AAFLGRPEVVFSREQIMAAAYGGGTYVSDRTIDSHIRNLRGKFAEAGCISIVETVHGV
                     GFRLGAAN"
     gene            3985..>4493
                     /locus_tag="VHZ56_12900"
     CDS             3985..>4493
                     /locus_tag="VHZ56_12900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012760613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HEX4298911.1"
                     /translation="MATTRVRQKWRPTLAMIVFAVLLTVLALPAAIVIWLRTLDHAAN
                     LIGPIETGALGVSLLLTVAIAVVFSRTITGPIEALVRRSEEIGRGGRAAIVAPEQQGT
                     REIAMLSQSFFDLAERLVDRTEYVSSFAAHVSHELKSPVTAIRGSAELLRDAEMSAAE
                     RRRFLDHIIA"
BASE COUNT          736 a         1372 c         1672 g          713 t
ORIGIN      
        1 atgaagggcc aggggtacgg gggcggctac atctacgacc atgacacgcc cgaggcgttc
       61 tcggggcagg agtacttccc cgaaaagctc ggacggcaga acttctatcg tccggtcgaa
      121 cgcgggttcg aacgggaaat ccgcaaacgg ctcgagtatt tcagccggtt gcgggcgaag
      181 cggaaagagg agaagtgaag gcgccgcggc tcagcgcgac gccctcaaac ggcttagtgg
      241 gagccgctct tcttgttgcc gttgtgcgac ggatcggagt tggcgtggaa cccaccggct
      301 tccggcccga gataggggtc ggtggagaag tcgtagccgc tccaggtggc ggccggggcg
      361 accggcgtga tgtcggcggt ggtcaggccg gtgatgtcgc tgcacggaat ccagccgcgg
      421 ttgggagcgg tgatgcggca ccaggaattc tgctgcgtcg agacggcgac gtcctggcca
      481 gcctgcagct tgccgatggt cttgaagttg tcgccggggc cggacatcag cgtcgtattg
      541 ctgtcgagcg tatcggccgc gaacgcgccg ccggcggaca aaacaacgat tgcggcaccg
      601 aggccaagtg cctgcttaaa cgagaggaag gtcattttat tctcctgcat agccctcgac
      661 tcatcaatac gccgacccct cctgaatgtt gccgttacca aaattacaaa tgcgccatgc
      721 cccggtcatc aaactcacgt tccagcgatt cagccgtgag gctggcgcgc cggcgccggc
      781 ttcgttaaac aggcggcaac catgatgtgg atgctgaaat gaatccctac ctccttgtcg
      841 ccgtgggcgg cgcgctcggc tcgatggccc ggtacggcac gggtgtgctg gtgggtcgcg
      901 cctgggacgc ggcgtttccg ctgggcacca tgctcatcaa catcgccggt tcgctggcga
      961 tggggctgtt catcggcttc ctcgcgcgga ctacaccgag ctggcagggt gacgcgcggc
     1021 tgttcgtcgc ggttggcgtg ttcggcggct tcacaacatt ttcatcgttc tcgctcgaca
     1081 gcatcgcgat ggtcgagcgc ggcgaaatcg ggcaggcgat cctctatgtg ctggtgtccg
     1141 tcgtcgtggg catcgcggcg ctctatgccg ggctggtggt aatgcggggg acggcatgag
     1201 cggcgtgcgg cagcaggccg tggcgcgcga cgaagacgga atgcggctcg accgctggtt
     1261 cggcgtgcat ttccccgacg tgaccttcgg gcacctgcag aagctgatcc gtaccgggca
     1321 ggtgcggatc gacagcggtc gcgccaagac cagctcgcgg ctcgtggcgg gacagctggt
     1381 gcgggtgccg ccgctggagg ccgaagtcag gcgcatcgaa cagaagatcg acgcagcgga
     1441 tgcggcgttc ctgcgcgatc tcatgctcta cgaggacgac gagctctacg tgttcaacaa
     1501 gccgcacggg ctggcctcgc agggcggcag cggcaccaag cggcacatgg acgggctgct
     1561 caagagcctg cccaacaagc agggcgaggc gccacgactg gtgcatcgcc tcgaccgcga
     1621 tacgtcgggc gtactggtgg tggccaagac gcgggcggcg gcgagctatc ttggaaaggt
     1681 gttccagtcg cggtcggcgc gcaagatcta ctgggcggtg gtgtacggca atccgaagcc
     1741 gccgcagggc tcgatctcgt gcttcctcgc caagcagatc gtcgacggca gcgagcagat
     1801 ggtggtggtg gagcagaacc atccggccgc gcagcattcg atgacgtatt actccacgac
     1861 cgacgtcgcg gcgcggcgct ttgcgtgggt gacgctgaag ccggtgacgg gacgaacgca
     1921 ccagctgcgc gtgcacatgg cgcagctggg caacccgatc atgggcgatc cgcggtattt
     1981 caacatcgag aatttccagg gtgcgccggg actgggcgag ggattgcagc tgcacgcgcg
     2041 gcgcatccgg ctgccgctgg agaacggcaa gacgctcgat gtcagcgcgc cactgccgcc
     2101 gcacatagtg cagagcttcg aggcgctggg cttcaacgcc gaccgctacg acgcgcgcga
     2161 ccaggacccg gaagatgcgt gaattcctcg aggacgccga gggccatcgc gacgacggct
     2221 acgggcgggc gcaggcgcac gccaagcggc agttgccgaa gcggttttat gccgaagccg
     2281 cggtgaaggc ggtcgagggt ggctatgccg tcgggctcga tgggcgggtg ccgaagacgc
     2341 cggggatgaa gccggtggtg gtgccgtccg aggcggtggc acaggcgatg gcggcggagt
     2401 gggcggcgca ggcagagctg atcgacccgc agacgatgcc gctgacgcgg atcgtgaact
     2461 cggcggtcga ggcgggagac gacgcgatcc cggggctgcg ggcggagatc gtgcggtatg
     2521 ccggcaacga tctgctgctc tatcgcgccg acgcgccgga gacgctggtg cggcggcagg
     2581 aggacgtgtg ggacgcggtg ctggtgaagc tcgcccggca tttcgacatc aagttccagc
     2641 cgacgatcgg ggtggtgcac caggcgcagc cggcgcccac gctggcgcgg ctggacgcgg
     2701 cgctgggggc cgaggaggtg ctgccgctgg cggcgctgaa cgtcctgacc tcgatcaccg
     2761 gttccgggct gctggcgatc gcccatcgcg ccgggctgat cgacgcggag acgatgtggg
     2821 ccgcggcgca tgtcgacgaa gaccacaaca ttgcgctgtg gggcgaggtc gaggagatca
     2881 ccgtgcgccg ggcgcagcgg cggtcggagt tcgacgcagc ggtgcggctg ctggcgctgc
     2941 cggcgcggta aatcctcgaa agctccgccg gggctgcaca aaatctgcac ggccgatccg
     3001 catcctcggg gatatgcgca acccgattca gccttcgccc gagcggcccg tgccccttcc
     3061 cgactgcatc ctgatggacg cctggtgggc ggaccggcgg gcggcaggac cgggatcgag
     3121 gaatggatcg atgcgctgga cacttccagc gacagcagcg gttccggtgc gcgacgacca
     3181 ccccctgcaa cagaggttcc agctgccgcg ggaatgacct cgtgagggtg gcaggcccgg
     3241 tggacggacc ggtcgaccgt cgtcgcctgt tttcccgccg cgccgcaggg gatagaaccg
     3301 gcgcatgccg cgcatcctga tcgccgacga cgaaccgaac atccgcgagg tgatctcgtt
     3361 cgcgctcgag cgggccgggc acgcgacgct gagcgcccgc accggagccg aggcgctgca
     3421 gctgttccgg cgcgggccgg tcgacctgat catcctcgat atcggcatgc cggagatgga
     3481 cgggctcgag gtgtgccggc aggtgcgcaa gagctcggac gtgccgatcc ttttcctcag
     3541 cgcgcgcgac gaggagatcg accgcgtgct cgggctcgag atcggcggcg acgactatgt
     3601 gaccaagccg ttcagcacgc gcgaaatggt ggcgcgggtg aatgtgatcc tgaagcgggc
     3661 gcgtggcggg acgaaggtgc cgccggcggt gagccatggc cgggtgcggc tcgacgccag
     3721 ccgccacgcg gtgtggttcg gcgagtccgt cgtcgcactg acggcactcg agttcgagat
     3781 cctcgcggcg ttcctgggac ggccggaggt ggtgttctcg cgcgagcaga tcatggcggc
     3841 ggcgtatggc ggcggcacct atgtgagcga ccggacgatc gacagccaca tccgcaatct
     3901 gcgcggcaag ttcgccgagg ccgggtgcat ctcgatcgtc gagacggtgc acggcgtcgg
     3961 cttccggctg ggggccgcga actgatggcg acgacccggg tccggcagaa atggcggccg
     4021 acgctggcga tgatcgtgtt cgccgtgctg ctgacggtgc tggcgctgcc ggcggcgatc
     4081 gtgatctggc tgcgcacgct cgaccatgcg gccaacctga tcggcccgat cgaaaccggg
     4141 gcgctcggcg tgtcgctgct gctgacggtg gcgatcgcgg tggtgttctc gcgcaccatc
     4201 accgggccga tcgaggcgct ggtgcggcgg agcgaggaga tcgggcgcgg cggacgcgcg
     4261 gcgatcgtcg cgccggagca gcaggggacg cgcgagatcg cgatgctgag ccagagcttc
     4321 ttcgatctcg ccgagcggct ggtcgaccgg accgaatacg tgtcgtcgtt cgcggcgcat
     4381 gtaagccacg agctgaagtc gccggtgacc gccatccgcg gctcggcgga gctgctgcgc
     4441 gatgccgaga tgagcgcagc ggagcgccgg cggttcctcg accacatcat cgc
//
LOCUS       DATAZA010000519         4833 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2521825, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000519 DATAZA010000000
VERSION     DATAZA010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4833
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2521825"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1324
                     /locus_tag="VHZ56_12905"
     CDS             <1..1324
                     /locus_tag="VHZ56_12905"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008983 - protein-glutamate
                     O-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HEX4298912.1"
                     /translation="GRLAEELTVGETYFFRNGDQFRALEHVLRARIRTPSATRRLSVL
                     SAGCSSGEEPFTIAMLTRDNIPSPPWHVVIRAVDLNPGALRKAESGRFGKWALRETPA
                     PMLQRWFTVHGKEMLISKELRDAVQFDLRNLTDPNSDIWQPGAYDVVFCRNVIMYLTP
                     EAQRAVAGRIANALMPGGYLFLGHAETLRGLSQEFHLVHTHGTFYYQRKGTDGYAGAP
                     EEADTEARLSWPAWSPSVTEAVDPDTSWYDAIDKSSRHIETLARPAPMEPAAPPPPLN
                     LKNVLDLLQRERFAEALDVIGRMPSEAAQDTDVLLLQALLLVQGGQPASAAEVCKVLL
                     AGDEFNAGANYVLALCFEGAGDAPSATLYYGIASQLDPGFAMPLLRRGLLARRSGDLA
                     NAANDLRRAQQLLQDEDASRLLLFGGGFTRLALARLCASELATCTGTS"
     gene            1306..1851
                     /locus_tag="VHZ56_12910"
     CDS             1306..1851
                     /locus_tag="VHZ56_12910"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HEX4298913.1"
                     /translation="MHRDIMSGPAITAEGRAAQLRREFDQSFALPAVGGKRPTVEFIS
                     VRLGSDTLALRVGEINRLLANAVVTPVPSPIGELRGIAGIGGKLVPVYDLAALLGQPS
                     TAGHWLVLAADRSIAFAFDQFEQHFRVDAAEIAPDPRPDRDFHIHSVARSADRTWSII
                     DLVSLAAAVKQRALSANLRRG"
     gene            1857..3338
                     /locus_tag="VHZ56_12915"
     CDS             1857..3338
                     /locus_tag="VHZ56_12915"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX4298914.1"
                     /translation="MFRNWTFGQKIAGGFAILVFITILIGVVATAALQTAVASKDRVI
                     NVDSPLMLKAAQMQTIRQQLTSSFRNVMLSGADADIATLQTARDAFTAAVAALKADAL
                     LRNDPISLQLAGAIATAYGDHTKVVDQVIGLRKSGTPVNTALAVYEDQGAPKGTILSR
                     ALTDYTTHRQDALAAAQQDSTDKAYLSENIILTSALLAALAAGLIANFLTRSLNQQIG
                     SAVSHVQNSSAELQSAANQQATGVKEQATSMSEINITISELLATSRQIAESAQRVAQI
                     SEQTTFAARSGDGTVNRANDSISGIRRQVDLVVGHMLELGKKSQQIGAILDIVTELAE
                     QTNILSINATIEAAGAGESGKRFSVVADEIRKLADRVGAAAKEIRELIDAVRSSVNTT
                     VMATEIGSKAVDTGSQQFGDVATAFKEIAKLVATTTEAAREIELSTKQQATAVEQVNI
                     AIANVAQATKETEASAGQTIQTATELASTSRDLLRLVRARTAA"
     gene            3343..>4833
                     /locus_tag="VHZ56_12920"
     CDS             3343..>4833
                     /locus_tag="VHZ56_12920"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4298915.1"
                     /translation="MAKDPYKYFRVEAGDLTDQLSRSLLELERVGSGGEVVPRLLRLA
                     HTLKGAARVVRQPEIADQAHMIEDLLTPYRDQAASVPRTSIEAVLQLIDGIANKILVL
                     SPPQSPPEQPGPTNLASAEEPVGPVRADATEIDDLLSGVTETNAQLVGLRDVAVLAGR
                     IRRLSDEILEQLSGTAPRGPGSVDATASAEKLRGIAANIELTVAATHGRIDRELRHLR
                     DAAEQLKLTPAQALFVSLERTARDAAQVLGKEVLFEALGGDIRLDTHVIRRVQDGLVQ
                     LIRNAVAHGIEVPRDRLAAGKERSGRVTVSVLRRGRQIVFRCEDDGRGIDIAALREAA
                     IRKGRPVPVLDHLATGELVGLLLAGGVTTSAVVSEVAGRGIGMDIVRETVAQLGAELA
                     VTTEAGKGTRFELIVPLSVSFVQALVLEASGAKVTLPLHAVRHTLRIEPGQIHRTSLG
                     QTIIHDGQAIPLVSLAKMLGRGTAKDGGVGNLSVVVVAGATGVVAVA"
BASE COUNT          860 a         1601 c         1556 g          816 t
ORIGIN      
        1 cggccggctc gccgaggaat tgacggtggg cgaaacgtat ttctttcgca acggggacca
       61 gttccgcgcc ctggagcacg ttctgcgtgc gcgcatccgg acgccgtcgg cgactcgccg
      121 gctctcggtc ctgtcggcgg ggtgctcttc cggcgaggag cccttcacga tcgccatgct
      181 gacacgggac aacattccga gcccgccctg gcatgttgtc atccgcgcgg tggacctcaa
      241 cccaggggca ctgcgcaagg ctgagagtgg ccggttcgga aagtgggcgc tccgcgagac
      301 tcccgcgcct atgctgcagc gctggtttac cgtccacggc aaggaaatgc tgatcagcaa
      361 agagctgcgc gatgccgtcc agttcgacct ccgcaatctc accgacccaa acagcgatat
      421 ctggcagcct ggcgcctacg acgtcgtctt ctgccgcaac gtcatcatgt acctgacgcc
      481 ggaggcacag cgggcggtgg ccgggcgcat cgcgaacgcc ttgatgccgg gcggctacct
      541 cttcctcggc catgccgaga cgctgcgcgg gctgtcgcag gaattccacc tcgtccacac
      601 ccacggcact ttctactacc agcgaaaggg gacggacggc tacgcggggg cgccggagga
      661 ggccgacacc gaagcaaggc tgtcatggcc ggcgtggtcg ccttcggtga cggaggccgt
      721 tgacccggat acgagctggt acgacgccat cgacaagtcc agccgccata tcgagacact
      781 ggcccggcct gcgccgatgg agccggcggc acccccgccg cccctgaacc tgaagaatgt
      841 cctcgacctc ctgcagcgcg agcggtttgc cgaagctctc gacgtcattg gccggatgcc
      901 cagtgaagcg gcacaggaca ccgacgtgtt gttgctgcaa gcgttgctgc tggtccaggg
      961 cggacagcct gcgtcggccg cggaggtctg caaggttctc ctcgccggtg acgaattcaa
     1021 cgccggggcg aattacgttc ttgccctttg cttcgaaggc gccggcgatg ccccgtcggc
     1081 gaccttgtac tacggcatcg ccagccagct cgatcccggc tttgccatgc cgctgctccg
     1141 tcgcggactg ctggcgcgtc ggtccggcga ccttgcgaac gccgccaatg acctgcggcg
     1201 ggcgcagcaa ttgctgcagg acgaggacgc ctcgcggctg ttgcttttcg gcggcggctt
     1261 cactcggctc gcactggcca ggctctgtgc ttccgagctg gcaacatgca ccgggacatc
     1321 atgagcggtc cggcgatcac agcggagggt cgcgctgcgc agctgcggcg ggagttcgac
     1381 caatccttcg cgctgccggc cgttggcggc aagcgaccaa ccgtcgagtt tatttctgtt
     1441 cggcttggct cggatacgct cgccttgcgg gttggcgaga tcaaccgcct gctcgcgaat
     1501 gcagtggtga cccccgtgcc cagcccgata ggggaactca gggggatcgc tggtatcggc
     1561 ggcaagctcg ttccggtcta cgatctggcg gcgctgcttg gccaaccctc gaccgcaggg
     1621 cattggctcg ttttggcggc ggaccgctcc atagccttcg cgttcgacca gttcgaacag
     1681 cacttcaggg ttgacgccgc agagatcgcg ccggacccac ggcctgaccg cgacttccac
     1741 atccactctg tcgcccgaag cgccgaccgc acgtggtcga tcatcgatct cgtttcgctg
     1801 gccgctgccg tcaagcagcg cgccctcagc gccaatttga ggaggggcta agcgccatgt
     1861 tcagaaactg gaccttcggt cagaaaatcg ccggtggctt tgccatactg gtgttcataa
     1921 cgatactcat cggggtcgtt gctaccgcgg cgctgcaaac agccgtcgcc agcaaggatc
     1981 gggtcatcaa cgtcgactcg ccactcatgc tgaaggcggc gcagatgcag acgatccgcc
     2041 agcagctgac gtcgtccttc cgcaatgtga tgttgtccgg agcggacgcg gacatcgcta
     2101 cattgcagac ggcgcgggac gcattcacgg cggccgtcgc ggcactgaag gctgacgccc
     2161 tcctgcgaaa cgatcccatt agcctgcagc ttgcgggcgc cattgctacg gcctacggcg
     2221 accacaccaa ggtcgttgac caggtgattg gccttcgcaa gagtggaacg ccggtcaaca
     2281 ctgcgttggc ggtttacgag gaccaagggg cgcccaaggg cacgattctc tcccgggcgc
     2341 tgaccgatta caccacgcac cggcaggacg ccctggccgc cgcgcagcaa gactccacgg
     2401 acaaggcgta tctgagtgag aacatcattc tcacctccgc tcttctcgcg gcgcttgccg
     2461 ccggtctcat tgcgaacttt ctcacgcggt cgctcaatca gcagatcggc agcgctgtca
     2521 gccacgtgca gaactcctct gccgagttgc agtccgcggc caaccagcag gcgactggtg
     2581 tcaaagagca ggcgacctca atgagcgaga tcaacattac catctcggag ctgctagcga
     2641 cctcgcggca gatcgccgaa agcgcccaac gcgtcgctca gatttccgag cagaccacgt
     2701 ttgcagcacg ctccggcgac ggaacagtaa accgggccaa cgattccatt tccggcatcc
     2761 gacggcaggt cgacctcgtc gtcgggcaca tgctcgaatt gggcaagaag tcgcaacaga
     2821 tcggtgcgat cctcgacatc gtgaccgagc ttgccgagca aaccaacatc ctgtcgatca
     2881 atgccacgat cgaggcggca ggtgcgggtg agagcggcaa gcgcttctca gttgtcgcgg
     2941 acgagatccg caagctcgcc gaccgggtcg gagcggcagc caaggagatt cgcgagctga
     3001 tcgatgccgt ccgcagttcg gtcaacacca ccgtgatggc caccgagatc ggctccaagg
     3061 cagtcgacac cggatcacag cagtttggcg atgtcgcaac ggcgttcaag gagatcgcca
     3121 agctggtcgc gacgaccacg gaggcggcgc gggagattga actctcgacc aagcagcagg
     3181 cgacagccgt cgagcaggtc aacatcgcca tcgccaacgt tgcacaggca accaaggaga
     3241 ccgaggcctc tgccggccag accatccaga cggcgaccga actcgcgtcg acgtcgcgag
     3301 atctcttgcg cctggtccgg gcgaggacgg ccgcctgaac cgatggcgaa agatccttac
     3361 aaatacttcc gcgttgaggc aggcgacctg accgaccagc tcagccggag cctgctcgaa
     3421 ctcgagcggg taggcagcgg cggcgaggtg gtgccaagac tgcttcgcct cgcccacacg
     3481 ctcaagggcg ccgctcgcgt cgtccgccag ccggagatcg ccgaccaggc tcatatgatc
     3541 gaggatctgc tcactccata tcgcgaccag gcggcctccg tcccgcgaac gagcatagag
     3601 gccgtgcttc agctgatcga tggaatcgcc aacaagatcc tggtgctgag ccccccgcag
     3661 tcgccgcctg agcagccggg cccgacaaac ctcgcatcgg cggaagagcc ggtggggccg
     3721 gtccgcgccg acgcgacaga aattgatgat ctgctgagcg gcgtgaccga gactaatgct
     3781 caactcgtgg gcttgcggga cgtggccgtc cttgccgggc gcatccgccg gctgtccgat
     3841 gaaatcctgg aacagctctc cggcacggcg ccgcgtgggc ccggctcggt cgacgccacg
     3901 gcgtccgccg agaagctccg cggcatcgcc gccaatatcg aactcactgt cgccgcaacg
     3961 cacggacgca tcgaccgcga gttgcgccac ctgcgagatg cggccgagca attgaagctt
     4021 accccggccc aggcgctgtt cgtaagcctc gaacggaccg cgcgcgatgc ggcgcaggtc
     4081 ctcggcaagg aggtgctgtt tgaagccctg ggcggggata tccgccttga cactcacgtc
     4141 atccggcgtg tccaggatgg tctggtgcag ttgatccgta atgccgtggc acacgggatc
     4201 gaggtcccac gcgaccgctt ggcggcgggc aaggagcgtt ccggccgggt cacggtcagc
     4261 gtgctgcggc gcggccgcca gatcgtcttt cgctgcgagg atgacggccg cggtatcgac
     4321 atcgccgcgc tccgcgaagc cgcgatccgc aaggggcggc ccgtccctgt gctggaccac
     4381 ctcgccacgg gcgagctcgt cggcctgctc ctcgccggtg gcgtgacaac gtccgcggtc
     4441 gtctccgaag tggccggccg cggcatcggc atggatatcg tgcgggagac agttgcgcag
     4501 ctcggtgcgg agcttgccgt gaccactgaa gcgggaaagg gcacacgatt cgagttgatc
     4561 gtgccgctgt cggtgtcatt cgtgcaggcc ctcgtgctcg aggcgagcgg cgccaaggtg
     4621 acattgccgc tccatgcggt gcggcacacc ctgcggatcg agccgggtca aattcatcgc
     4681 acgtcgcttg gccagacaat catccacgat ggtcaggcca tccccctcgt ctcgctggcc
     4741 aagatgcttg gccgcgggac cgcgaaggat ggcggcgtgg gcaatctttc agtcgtcgtg
     4801 gttgcaggcg ccaccggggt agtggccgtc gcc
//
LOCUS       DATAZA010000520         2238 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3680321, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000520 DATAZA010000000
VERSION     DATAZA010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2238
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3680321"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(14..406)
                     /locus_tag="VHZ56_12925"
     CDS             complement(14..406)
                     /locus_tag="VHZ56_12925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014892725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HEX4298916.1"
                     /translation="MSIQRARALRRQLSAPEARLWNAVRNEQLRHLHFRRQVPIGPYY
                     ADFASHAAKLIIEVDGSQHAADDAIAYDARRTAFLESRGYRVLRVPAGEVLNNLQAVF
                     DAILGAASTPSPPAAPVPPPRKGEGAGD"
     gene            complement(522..797)
                     /locus_tag="VHZ56_12930"
     CDS             complement(522..797)
                     /locus_tag="VHZ56_12930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298917.1"
                     /translation="MEPPRLGQRPAIDLDRQRGEFVEIPGGPLYRARTLHIGLAAAGL
                     LMAIALYADTRFGGSWVIAAAGMVAAVMFGVCLAGRFPAYWFRKGRK"
     gene            complement(914..1336)
                     /locus_tag="VHZ56_12935"
     CDS             complement(914..1336)
                     /locus_tag="VHZ56_12935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298918.1"
                     /translation="MTASLEPSFTAASALAAARAHPLSRKKAMLAALLLDAAADACFA
                     QSGDDDILAFRAGLAEASPTLALLFALCALDPAGPHLVTEPVEVPLSDYGALRVEDFM
                     VSLYNAHTVQRVRIATPDGGRHDVHAVLAEALAALAAR"
     gene            complement(1507..2181)
                     /locus_tag="VHZ56_12940"
     CDS             complement(1507..2181)
                     /locus_tag="VHZ56_12940"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX4298919.1"
                     /translation="MGDRIKITASDGFALNAYRASPEGKPRGGVVVIQEVWGLNGFVR
                     GVCDRFAKHGYVAVAPAMFDRVDYGYESENYAPEQFQIIGEMMKKFDHSKALPDVEAA
                     VKEAAKAGKVGITGYCFGGSITWRACHAGLGLSAGSGYYGGGVANYIDLEPQVPLEMH
                     YGAEDTGIPLDQIEAIKKRHPNVGVYTYPAVHGFCNSYRPANFNEAACKKASARTLEF
                     FHQHLA"
BASE COUNT          328 a          694 c          856 g          360 t
ORIGIN      
        1 gagccgtgaa atctcagtcg cccgctccct cccccttgcg gggagggggg accggcgcag
       61 ccggtgggct gggggtggag gcggccccga ggattgcgtc gaacacggcc tggagattgt
      121 tgaggacctc gccggccggg acgcgcagga cgcgataacc gcggctctct aggaaggcgg
      181 tgcggcgcgc gtcgtaggcg atggcgtcat cggcggcgtg ctggctgccg tccacctcga
      241 tgatgagttt tgccgcgtgc gaggcgaaat cggcgtagta ggggccgatc ggcacctgtc
      301 ggcggaagtg gagatggcgc agctgttcgt tgcgaacggc gttccacagg cgggcttcgg
      361 gggctgacag ctgccgccga agagctcggg cgcgctgtat gctcattccc cccaacccac
      421 catgcttcgc atggtccccc ctccccgcaa gggggaggga gcgccgactg cacgtttccg
      481 tcaagcccgg atgacggccg agggatcagg gctcaggcga gctacttccg ccccttgcga
      541 aaccagtacg ccggaaaccg cccggccaga cacacgccga acatcacggc ggcgaccatg
      601 ccggcggcgg cgatgaccca gctgccgccg aagcgggtgt cggcgtagag ggcgatggcc
      661 atcagcaggc ccgcggcggc gaggccgatg tggagggtgc gggcgcgata gagcgggccg
      721 ccggggattt cgacgaactc gccgcgctgg cggtcgaggt cgatggcggg gcgctggccc
      781 aggcgtggcg gttccattcg gcggcctcgt cggttcggtg cgatgcgccc gccctagcac
      841 cggtggagcc ggcgggccag acacgggttc ggatcaacgc cgggacgcgg gctccgttgc
      901 ggggagcggg cgttcagcgc gccgccagcg ccgccaatgc ctcggccagc accgcgtgca
      961 cgtcgtggcg gccgccgtcg ggggtggcaa tgcggacgcg ctgcacggtg tgggcgttgt
     1021 agagcgacac catgaagtcc tcgacgcgca aggcgccgta gtcgctcagc ggcacctcca
     1081 ctggctcggt gacgaggtgc ggaccggcgg ggtcgagggc gcagagggca aacagcagcg
     1141 ccagcgtcgg cgaggcttcg gcaaggccgg cgcggaaggc gaggatgtcg tcgtcgccgc
     1201 tctgcgcgaa gcaggcgtcg gccgcggcgt cgagcagcag cgcggcgagc atcgccttct
     1261 tgcggctgag cggatgggcg cgggcggcgg cgagcgcgct ggcggcagtg aaagatggtt
     1321 ccagcgaggc ggtcatctta caccgacgtc atcccggacc tgatccggga tcgatgcggc
     1381 agcgggcgcg gatggtgccg tgggtcccgg ctttcgccgg gatgacgcgc agtgggtggg
     1441 tcgccccctc caccggcttc gccggtcccc ctcccgccgt gcgggagagg cattccgatc
     1501 gcgggatcac gccaaatgct ggtggaagaa ttcgagcgtg cgggcgctgg ctttcttgca
     1561 ggcggcttcg ttgaagttgg cggggcggta ggaattgcag aagccgtgga cggccggata
     1621 ggtgtagacg ccgacattgg ggtggcgctt cttgatggcc tcgatctggt cgagcgggat
     1681 gccggtgtct tcggcgccgt agtgcatttc gagcggcacc tgcggctcga ggtcgatgta
     1741 gttggcgacg ccgccgccgt aatagccgga gccggcgctg agcccaaggc cggcgtggca
     1801 ggcgcgccag gtgatggagc cgccgaagca gtagccggtg atgccgacct tgccggcctt
     1861 cgccgcttcc ttcaccgccg cctcgacgtc gggcagcgcc ttggagtgat cgaacttctt
     1921 catcatctcg ccgatgatct ggaactgctc gggagcgtag ttctcgctct cgtagccgta
     1981 gtcgacgcgg tcgaacatgg cgggcgccac cgcgacatag ccgtgtttgg cgaagcggtc
     2041 gcagacgccg cggacgaagc cgttgaggcc ccacacctcc tggatgacga cgacgccgcc
     2101 gcgcggcttg ccttcgggcg aagcgcggta ggcgttgagc gcgaagccgt cggatgcggt
     2161 aatcttgatg cggtcgccca tgcggatgct tcctgacttt ttgttttatc ggttgttgcc
     2221 gatgggagca cagtttca
//
LOCUS       DATAZA010000521         3214 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3566625, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000521 DATAZA010000000
VERSION     DATAZA010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3214
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3566625"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(7..849)
                     /locus_tag="VHZ56_12945"
     CDS             complement(7..849)
                     /locus_tag="VHZ56_12945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298920.1"
                     /translation="MMSLVIGIGSLMIGIAYAGLGSLSAWETISLNRYRGWSRFGIGF
                     SLMAASCGPHHLVHGWHVLQGESISYPMFAATVIGLPAGLVFVLLRFETMWGGQGDRW
                     VTASAHQAVLLAGVFTLVAGVLAAWTFAQPGADLAFQYLCTSAGLAGRATAPEAGIDF
                     GSVTFLANMFVTITYGMVGCYLADHQVRSYLTNGAWSLSGVALTGVFFTCAQMHFIDA
                     TTRGTGLMLFFDLIGIPASIYFLWVVKQVHNDSVMDWNRRPLVGAAATPARPSPWSPE
                     RTQH"
     gene            complement(846..2417)
                     /locus_tag="VHZ56_12950"
     CDS             complement(846..2417)
                     /locus_tag="VHZ56_12950"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX4298921.1"
                     /translation="MSGLRRNTSARLGAAAAEPHPTAKSDAPPVARTGSEVERLRSVV
                     AQLMHTAAHDPLTGLPTRSLLLERLDEELARDVADGEKIAVLFVDLDNFKLVNDSLGH
                     GSGDEVLSEMARRISGCIGSEDTASRFGGDEMVILHPRATEGSEVALGKRLLAALAEP
                     IFVSGKEVVVSASVGVALCIPGMKSAAQLLREADTALYAAKDRGRARLEQFSDELYER
                     AEKRMQIESDLRAALREQQLFVEYQPQVRLRDGCVVGVEALVRWRHPRFGVVPPGDFI
                     PVAEDCGLIIGIGRQVLEKSCRQLAEWTKLTPGRSFAMTVNVSPRQLADPAFFSELRQ
                     VLADTGIDPTKLCLEITESAMTSAPAEVVRLLDQIRQLGIYIAIDDFGTEHSSLSRLR
                     DMPAEVLKIDRSFIDGLGSETGDTAIVSSILSLAYAMGKHTIAEGVEKREQAALLLGM
                     GCEVAQGYFFSRPVAAERIPPLLTGALWQPRSARSQLNADPAEARVRRGHRYFIDEFL
                     DHIGAPMGTKAPASP"
     gene            complement(2636..>3214)
                     /locus_tag="VHZ56_12955"
     CDS             complement(2636..>3214)
                     /locus_tag="VHZ56_12955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HEX4298922.1"
                     /translation="PDMSRYQGLVALEGGNLEDAAHEYFLRSEQIPTRVRIAVGEEWR
                     GGSDGPKHRWRAGGMLLQFLPKAPERARLPDLHPGDAPEGAATHTVQEDDAWVEGQSL
                     ISTIEDVELIDPDLSGERLLYRLFHERGVRVFAPLPLRAQCSCSREAVSSMLKSFAAG
                     DRADMVKDGKVVVTCEFCSSVYEFTPHEAGVE"
BASE COUNT          615 a         1058 c         1012 g          529 t
ORIGIN      
        1 agtccgtcag tgttgcgttc gctccgggct ccagggtgaa ggacgcgccg gcgtggcggc
       61 ggcgccgacc agcggacgac ggttccagtc catcacggaa tcattgtgca cctgtttgac
      121 cacccacaga aaataaatcg aggcggggat gccgatcagg tcgaagaaca gcatcaagcc
      181 ggtgccacgc gtcgtggcat cgatgaaatg catctgggcg caggtgaaga acacaccggt
      241 cagcgccaca cccgacagcg accaggcgcc gttggtgaga taactgcgta cctggtggtc
      301 ggccaggtaa cagccaacca tgccataggt gatcgtcaca aacatgttgg cgaggaaggt
      361 aaccgaaccg aagtcgatcc cggcctccgg agccgtggcg cggcccgcca agccggccga
      421 cgtgcacaga tactgaaacg caaggtcagc tccgggctgg gcgaaggtcc aggccgccaa
      481 gacccccgcg acgagagtga agacgccggc cagcagtacc gcctggtgcg ccgaggccgt
      541 gacccagcga tcaccttgac caccccacat cgtctcgaag cgcagcagga cgaagacgag
      601 gccggccggc agaccgatca ccgtggcggc gaacatcgga taggaaatgc tctcgccctg
      661 gagaacgtgc cagccatgca ccagatgatg cgggccgcag ctggcagcca tcagcgagaa
      721 gccgatgcca aagcgggacc aaccccggta acggttcagg ctgatcgttt cccaggccga
      781 cagcgaccca aggcccgcat aggctatccc gatcatcaga ctgccgatgc caatgaccag
      841 ggacatcatg gtgaggccgg ggccttggtc cccatcggag cgccgatgtg atcgaggaat
      901 tcgtcgatga agtaacgatg gccgcgccgg acccgcgcct ccgcggggtc ggcgttaagc
      961 tgcgaccgcg ccgaacgggg ttgccagagc gcgccggtca gcaacggcgg gatcctttcg
     1021 gccgcaacag gccgcgaaaa gaaatagccc tgggcgactt cgcagcccat gccgagcaga
     1081 agcgccgcct gctcacgctt ttccacgccc tcggcgatcg tgtgcttgcc catggcgtag
     1141 gccaggctga ggatcgatga aacgatcgcc gtgtcgcctg tttcgctgcc gaggccgtcg
     1201 atgaagctgc ggtcgatctt caggacctcg gccggcatgt cgcggaggcg agacagcgac
     1261 gagtgctcgg tgccgaaatc gtcgatcgcg atatagattc ccaattgcct gatctggtcg
     1321 agtagccgga cgacctccgc aggcgcgctc gtcatcgcgc tttcggtgat ctccaggcac
     1381 aattttgttg gatcgatgcc ggtgtcggcg agaacctgcc ggagttcgct gaaaaaggcc
     1441 gggtccgcga gttggcgggg cgagacgttc accgtcatcg cgaacgaccg gcctggcgtc
     1501 agtttcgtcc attcggcaag ctgtcggcag gatttctcca gcacctgtcg tccaatgcca
     1561 ataatgagtc cgcagtcctc ggcgacggga atgaagtcgc cgggcggcac gacgccaaac
     1621 cgcggatgtc tccagcgcac cagcgcctcg acgccgacga cgcacccatc cctcaggcgg
     1681 acctgcggct gatactccac aaagagctgc tgctcgcgca gcgccgcccg caaatccgac
     1741 tcgatctgca tgcgtttctc ggcccgctcg tatagctcgt cgctgaactg ctccagccgt
     1801 gcacgaccac ggtccttggc cgcatagagt gcggtgtccg cctcgcgcag caattgggcg
     1861 gcggatttca tgccgggaat gcatagcgcg accccgacgc tcgccgacac cacgacttcc
     1921 ttgccggata caaagatcgg ctcggccaac gcggccaata ggcgtttgcc aagggctact
     1981 tccgaaccct cggtcgcgcg cggatgcagg ataaccatct cgtcgccgcc gaatcggctc
     2041 gctgtatctt ccgatccgat acagccgctt atccgccgcg ccatttcgga cagcacctca
     2101 tcgccgcttc catggccgag cgagtcgttc accagcttga aattgtcgag atcgacgaac
     2161 agaactgcga ttttctcgcc gtcggcgaca tcgcgtgcga gttcctcgtc aagccgttcg
     2221 agcagcaaac tgcgcgtggg aagcccggtc agcggatcgt gggctgccgt atgcatcaat
     2281 tgcgcaacga cgctgcgcag gcgctcgacc tcggaaccgg tccgggcgac cggaggcgcg
     2341 tcgcttttgg ccgtaggatg cggctccgcg gctgcggcgc cgaggcgcgc tgatgtgttt
     2401 cgccgcagtc cagacatagg ccccgccccg catgcaacca gtagtatcag caacggtagg
     2461 cagcacggag tttgcgaatg gttgccgaaa aataattccc ggcatgcgcg acgaagcttc
     2521 caagaagatg gttagccgct ggtaacggcc tgccgggttg gctggtggta gccttgtgcg
     2581 caggcgagca gacgccgtcc tttggacggc tatgccatga cgggcctatg tcgccctact
     2641 ccacgccggc ttcgtgcggc gtgaattcgt agaccgacga gcagaactcg caggtgacga
     2701 ccaccttgcc gtccttcacc atgtcggcgc ggtcgcccgc ggcgaagctt ttcagcatgg
     2761 aggacaccgc ctcgcgcgag caggagcatt gcgcgcgcag cggcaacggc gcgaacacgc
     2821 ggacgccacg ctcgtggaaa agccgataca gcaaccgctc gcccgacaaa tcaggatcga
     2881 tcagttcgac gtcctcgatc gtcgagatca gcgactgacc ctcgacccag gcgtcgtctt
     2941 cctgcaccgt gtgggtggcg gcgccttccg gcgcgtcccc cgggtgaagg tctggcagcc
     3001 gcgcgcgctc cggcgccttc ggcaagaact gcagcagcat accgccggcg cgccagcgat
     3061 gtttcggtcc gtcgctgccg ccgcgccatt cctcgccgac cgcgatccgc acccgggtcg
     3121 ggatctgctc cgagcgcagg aaatattcat gcgcggcgtc ctcgagattg ccgccctcga
     3181 gcgccaccag cccctgatag cggctcatgt ccgg
//
LOCUS       DATAZA010000522         4446 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1242463, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000522 DATAZA010000000
VERSION     DATAZA010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4446
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1242463"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..416)
                     /locus_tag="VHZ56_12960"
     CDS             complement(<1..416)
                     /locus_tag="VHZ56_12960"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEX4298923.1"
                     /translation="MAPAEPVASGVVRRPFRLIQLAVALLLAIKLYLSIFTPPIGDEA
                     YYWMWGQKLGWSYFDHPPLHAWLLHLMGLLFGWNLFSLRILTWVTLGGTLWIIWLWAR
                     RLKPDDPAAWFWPSAAIYLASPLFFLMSNIAFHDHLL"
     gene            complement(403..1875)
                     /locus_tag="VHZ56_12965"
     CDS             complement(403..1875)
                     /locus_tag="VHZ56_12965"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEX4298924.1"
                     /translation="MTDLAAAARKPIRWDVVLVQLALLYIVGLRLWFDVTVSPMGDEA
                     YYWMWGQHLAWSYFDHPPLDGWLQGLVAAIFGWSNLSVRLLSWFTTAGTLGIFWLWSA
                     RLAPEDRQGWFWHTGAIYLTIPTIALMASFAFHDHLLLFLVIASLYAFDGFAAAWEAG
                     QRDWRGLYVAAILLGLAVLTKYNGVFLGLGYFVWIIVRPTMRPLFRTWQLWLAALLAV
                     VIQAPVLYWNLTENLASFRFHLAERPHETWGKPNLDQAVVFLCVMVLAMSPVLFAALF
                     RIPWLKRRNPAEARAISLSITIFVVGTLCWAVLSAYVVVFFHWNIVAYAALAPIAYRL
                     LGRYGSWAHIAIGAFVLTGFVATYAIAPIRLFDPAARANYGWPQVAHEVQAAQQSHPG
                     AFLAGTRYTYAAQLGFQLHRTDVTAFNPLPSENDYWWDAAAHRGQDALIVADRTFPIA
                     NARPSFASLEKLEDVPVTVGGNTVWTFEIWLGKDYGNGPG"
     gene            2115..3026
                     /locus_tag="VHZ56_12970"
     CDS             2115..3026
                     /locus_tag="VHZ56_12970"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX4298925.1"
                     /translation="MVSREARVEIDRMFAKAREQAVAYPDGKPLALRRREWEAESRLD
                     VLPKGARFQPADAGSVRAEWMEMPHMNAERAFLLLHGGGYNAGSPRTHRKMAAHLSRA
                     GNMRVLVPDYRLAPEHAFPAAVKDALTAYGWLLEQGFVEDNIIVGGDSAGGGLALSML
                     LALREGGAKMPRAAVLLSPWTDLTVSSGSYERMRKLDPIISREGLREAGLLYAGGRDP
                     ADPMASPLFADLRGLPPLLVQVGGDETMFDDSRVFAERARAAEVEVSFKIFDGMWHVH
                     QSGAPDVPESVAAYNDIAAFIRAQFGE"
     gene            3085..3414
                     /locus_tag="VHZ56_12975"
     CDS             3085..3414
                     /locus_tag="VHZ56_12975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011504361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX4298926.1"
                     /translation="MSVTERDAVFDALADEYRRVLLERLRRTNGQTLSRLCDGLPITR
                     QAVTKHLAALEDASLVVTQRRGREKLHFLNPVPIHAIAMRWLRQFDAVKLEALAAAPS
                     VKAKGPG"
     gene            complement(3451..>4446)
                     /locus_tag="VHZ56_12980"
     CDS             complement(3451..>4446)
                     /locus_tag="VHZ56_12980"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX4298927.1"
                     /translation="PQNDKAAQQDIKPPPKDVQSTQTDKGQKADVQFIHPKPPADATD
                     VKIVQQPKDDKGGVVFQIGVDIYINNPQQTRDRLYNPNHGDQIYYEDLSRGRTRETIT
                     RKDGSKVVTIYAQNGDVLQRSKITPQGREIILSSYDPRDTDENDWQDPGDDLPPLQLN
                     IPADQYTLDADTADQNQVDDFLNKPPVEQVQRIYTIDEVKRSARLRDMLPRLEIGNLT
                     FDTAKATISRDQVGALAGVAKGMQDLLNRNPAEVFLVEGHTDAVGSDVSNLVLSDQRA
                     ATVARILTDFYEIPAENLVTQGYGERYLKVDTQGPEPLNRRVTIKRITPLIAYNE"
BASE COUNT          747 a         1318 c         1668 g          713 t
ORIGIN      
        1 agcagatggt cgtggaaggc gatattgctc atcaggaaga acagcggcga tgcgaggtag
       61 atcgccgcgg acggccagaa ccacgcagcc gggtcatcgg gtttcagccg ccgggcccag
      121 agccagatga tccacagtgt accgccgagc gtcacccagg tgaggatgcg caggctgaag
      181 aggttccagc cgaacagcag tcccatcaga tgcagcagcc aggcatggag gggagggtgg
      241 tcgaagtacg accagccgag cttttggccc cacatccagt aataggcctc gtcgccgatg
      301 ggcggggtga agatcgacag gtagagcttg atggcgagca ggagcgcgac cgccagctgg
      361 atcagccgaa acgggcggcg caccacgccg gaagcgacgg gctcagccgg ggccattgcc
      421 gtagtccttg ccaagccaga tctcgaatgt ccacacggtg ttgccgccga cggtgaccgg
      481 cacgtcctcc agcttttcga gcgaggcgaa gctcggccgc gcgttggcga tggggaaggt
      541 gcggtcggcg acgatcagcg cgtcctgccc ccggtgagcc gcggcgtccc accagtagtc
      601 gttttcggat ggcagcgggt tgaaggcggt gacatcggtg cggtgcagct ggaagccgag
      661 ctgggcggca taggtgtagc gggtgccggc gaggaacgcg ccggggtgcg actgctgggc
      721 ggcctgcacc tcatgggcca cctgcggcca gccgtaattg gcgcgagcgg ccgggtcgaa
      781 caggcggatg ggagcaatcg cataggtggc gacgaagccg gtcagcacga aggcaccgat
      841 ggcgatgtgg gcccagctgc catagcgccc gaggaggcgg taggcgatgg gggcgagggc
      901 cgcataggcc acgatgttcc agtggaagaa gacgaccaca taggccgaga gcaccgccca
      961 gcacagggtg ccgacgacga agatggtgat cgacaggctg atggcgcgcg cctcggccgg
     1021 gttgcgccgc ttgagccagg ggatgcggaa cagggcggcg aatagcaccg gcgacatggc
     1081 gaggaccatg acgcacagga agacgacggc ctgatcgagg ttcggcttcc cccaggtctc
     1141 gtgtggccgc tcggccagat ggaagcggaa gctggccagg ttttcggtga ggttccagta
     1201 gagcaccggc gcctggatga cgaccgcgag cagggcggcg agccagagct gccaggtccg
     1261 gaaaagcgga cgcatggtcg ggcggacgat gatccagacg aaatagccga gaccgaggaa
     1321 aacgccgttg tacttggtga ggacggcgag cccgaggagg atcgccgcaa catacaggcc
     1381 gcgccagtcg cgctggccgg cctcccacgc ggcggcgaag ccgtcgaagg cgtacagcga
     1441 ggcgatcacc aggaacagca gcaggtggtc gtggaaggca aagctcgcca tcaaggcgat
     1501 ggtcgggatg gtcaggtaga tggcaccggt gtgccaaaac cagccctggc ggtcctcggg
     1561 cgccagccgc gcgctccaca gccagaagat gccgagcgtg ccggcggtgg tgaaccagct
     1621 cagcaggcgc accgaaagat tgctccagcc gaagatcgcc gcgacgaggc cctgcagcca
     1681 gccgtcgagc ggcgggtggt cgaagtacga ccacgccagg tgctggcccc acatccagta
     1741 atacgcctcg tcgcccatcg ggctgacggt cacgtcgaac cagagccgca agccgacgat
     1801 gtagaggagg gcaagctgga caagaacgac atcccagcgg atgggcttgc gggcggctgc
     1861 ggcaaggtcg gtcatggcga gggccggaag gcttcgctgc cccgcagatc gccggtcgac
     1921 gcgtggcgga gccggaacgc cgggcccccc acgacaaaga gccgtagcgc gacgatttcg
     1981 ccgcgccgcg tccgcgcctg tcccgccagc gtccccgtgc ccatggcgga cgaatagccg
     2041 attagcgggc cggcgcaaat ggttgcgtgt cgtcgccgga ccgctactat gcccgcggtt
     2101 ccggggggaa caagatggtc agcagagagg cgcgggtcga gatcgaccgc atgttcgcca
     2161 aggcacgcga gcaggccgtg gcctatccgg acggcaagcc gctggcgctg cggcggcgcg
     2221 agtgggaggc ggagtcgcgg ctcgacgtgc tgccgaaggg cgcgcggttc cagccggcgg
     2281 atgcggggag cgtgcgggcc gaatggatgg aaatgccgca tatgaacgcc gagcgggcgt
     2341 tcctgctgct gcatggcggg ggctacaatg ccggctcgcc ccggacgcat cgcaagatgg
     2401 cggcgcatct gagccgggcg ggaaacatga gggtgctggt gccggactac cggctggcgc
     2461 ccgagcatgc gtttcccgcg gcggtcaagg atgcgctcac ggcctatggc tggctgctcg
     2521 agcagggctt tgtcgaggac aacatcatcg tcggcggcga ttcggccggc ggggggctgg
     2581 cgctgtcgat gctgctggcc ctgcgcgagg gtggggcgaa aatgccgcgg gcggcggtgc
     2641 tgctgtcgcc atggacagac ctgaccgtct ccagcggatc gtacgagcgg atgcgcaagc
     2701 tcgacccgat catcagccgc gaggggctgc gcgaggccgg gctcctgtat gcgggcgggc
     2761 gcgatccggc ggacccgatg gcctcgcccc tgttcgccga tttgcgggga ttgccgccgt
     2821 tgctggtgca ggtcggtggc gacgagacga tgttcgacga cagccgggtg tttgccgagc
     2881 gggcgcgggc agccgaggtc gaggtgtcgt tcaagatttt cgacggcatg tggcatgtgc
     2941 accagtcggg tgcgccggac gtgccggaat cggttgctgc gtacaacgac attgccgcct
     3001 tcattcgcgc gcaattcggc gaatagttcg aggcaggggc ggttcgcggc gttgatgcgg
     3061 accggtagtg gacgagggcg tggcatgagt gtgacggagc gggacgcggt gttcgacgcg
     3121 ctcgccgatg agtaccggcg tgttttgctg gagcggttgc ggcgcaccaa cgggcagacc
     3181 ctgagccggc tgtgcgacgg gctgccgatc acccggcagg cagtgaccaa gcatctggcg
     3241 gccctcgagg acgccagtct cgtggtgacc cagcggcgcg gccgcgaaaa gctgcatttt
     3301 ctcaatccgg tgccgatcca cgccatcgcc atgcgctggc tccggcagtt cgatgcggtg
     3361 aaactcgagg ctttggcggc ggcgccatcg gtcaaagcaa aagggccggg atgatcccgg
     3421 ccctttcggt cctgttcagc gcagttgccg ctattcgttg taggcgatca gcggggtgat
     3481 gcgcttgatg gtcacgcgcc ggttgagcgg ctccgggccc tgcgtgtcga ccttaagata
     3541 gcgctcgccg taaccctggg tgaccaggtt ctcggccggg atctcgtaga agtcggtgag
     3601 gatgcgggcg acggtcgccg cgcgctggtc cgacagcacg aggttcgaga cgtccgaccc
     3661 gaccgcatcg gtgtggcctt cgacaaggaa gacctcggcc gggttgcggt tgagcaggtc
     3721 ctgcatgccc ttggcgacgc ccgccagcgc gccgacctgg tcacgcgaga tcgtcgcctt
     3781 ggcggtgtcg aaggtcaaat tgccgatctc gagccgcggg agcatgtcgc gcaggcgggc
     3841 cgagcgcttg acctcgtcga tggtgtagat gcgctgcacc tgctccaccg gcggcttgtt
     3901 gaggaaatcg tcgacctggt tctggtcggc ggtatcggcg tcgagggtat actgatcggc
     3961 cgggatgttg agctggagcg gcggcaggtc gtcgccgggg tcctgccagt cgttctcgtc
     4021 ggtgtcccgc ggatcgtacg acgacaggat gatctcgcga ccctggggcg tgatcttgct
     4081 gcgctgcagc acgtcgccgt tctgcgcgta gatggtcacg accttgctgc cgtccttgcg
     4141 ggtgatggtc tcgcgggtcc ggccccggct cagatcctcg tagtagatct ggtcgccgtg
     4201 gttgggattg tagagccggt cgcgggtctg ctgcgggttg ttgatgtaga tgtcgacgcc
     4261 gatctggaag accacgccgc ccttgtcgtc cttgggctgc tggacgatct tgacgtcggt
     4321 cgcgtcggcc ggcggcttgg gatggatgaa ctgcacgtcg gccttctggc ccttgtcggt
     4381 ctgggtcgac tgcacgtcct tcggcggcgg cttgatgtcc tgctgcgccg ccttgtcgtt
     4441 ctgcgg
//
LOCUS       DATAZA010000523         3718 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3452803, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000523 DATAZA010000000
VERSION     DATAZA010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3718
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3452803"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..436)
                     /locus_tag="VHZ56_12985"
     CDS             complement(<1..436)
                     /locus_tag="VHZ56_12985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006589626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX4298928.1"
                     /translation="MTDLTTLSLAAARKGLTGKSFSSLELTDAYLGAIEAANPKLNAY
                     VAVTADRARAMARASDEKLKAGQGGALEGIPLGIKDLFATQGAHTQAASHILDGFRPE
                     YESTVTSRLWRDGAVMLGKLNMDEFAMGSSNETSFYGPVINPW"
     gene            complement(584..871)
                     /gene="gatC"
                     /locus_tag="VHZ56_12990"
     CDS             complement(584..871)
                     /gene="gatC"
                     /locus_tag="VHZ56_12990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEX4298929.1"
                     /translation="MAVDAQTVRRIGRLARIRIEESEVEKYQGELNAILGFVEQLDEV
                     DVAGVEPMTSVTPMQLRRREDKVSDGGYADKIVANAPLTEDNFFMVPKVIE"
     gene            complement(913..1440)
                     /locus_tag="VHZ56_12995"
     CDS             complement(913..1440)
                     /locus_tag="VHZ56_12995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298930.1"
                     /translation="MKLTWFGGMTLRIYLGGEIVVIGAEMAPDGVDRGEVLAGADRVV
                     ALADRAIPLIDPASWRPRPAGRAIDAAPPVEVVRIGEAALLISAAGEPPLVVLGSGEL
                     PRFGRWADGAVVVLTSGRESLVAEATVLLDVARPRMLALALDSQTLDTVIAELAEHLD
                     GAGLVSLEPGLALEV"
     gene            1483..1938
                     /gene="ruvX"
                     /locus_tag="VHZ56_13000"
     CDS             1483..1938
                     /gene="ruvX"
                     /locus_tag="VHZ56_13000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009469358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEX4298931.1"
                     /translation="MSVDRSIPALPASGKLLGLDLGTKTIGVAVSDGVRYSATPLETI
                     SRTKFTEDALRLAELVAENAVVGIVLGLPLNMDGSEGPRVQATRAFARNLGAKLLIPI
                     VFWDERLSTAAVNRMLIEADTRRSRRAEIVDKLAASYILQGYLDSLRRS"
     gene            2755..>3718
                     /locus_tag="VHZ56_13005"
     CDS             2755..>3718
                     /locus_tag="VHZ56_13005"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006934932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HEX4298932.1"
                     /translation="MTSASSGRETPAAPGGKRPFPHRNLLGISQLNQYEILELIDRAE
                     AMIPVSRQQRKSLPTLSGKTQINLFFEPSTRTQASFEIAGKRLGAQVTNMSVKTSSVA
                     KGETLVDTAATLNAMQPDVIIVRHPASGAVELLSQKVGCAVINAGDGAHEHPTQALLD
                     ALTIRQHKGRLAGLTVAICGDIAHSRVARSNLLLLGALHVRTRVIAPRTLLPKGIDSL
                     TSEVFTDMRAGLEGADVVMMLRLQHERAAGRLIPSVREYYRFYGLDAEKLALAKPDAT
                     VMHPGPMNRGVEIDPAIADGPRSVITHQVEMGVAVRMAVLDALLA"
BASE COUNT          675 a         1270 c         1146 g          627 t
ORIGIN      
        1 gccagggatt gatcaccggg ccgtaaaacg acgtctcgtt ggacgagccc atggcgaact
       61 cgtccatgtt gagcttgccg agcattaccg cgccgtcgcg ccagagccgg ctggtcacgg
      121 tggactcgta ctcgggcctg aagccatcga ggatgtggct cgccgcctgg gtgtgggcac
      181 cctgggtcgc gaacaggtcc ttgatgccga gcggaatgcc ttccagcgcc ccgccctgcc
      241 cggccttgag cttctcgtcg gacgccctcg ccatcgcccg cgcccggtcg gcggtgaccg
      301 ccacgtaggc attgagcttg ggattggccg cctcgatcgc cccgagatag gcgtcggtca
      361 gctcgaggga tgaaaagctc ttgccggtca gtcccttgcg ggcagcggca agcgacagcg
      421 tggtgaggtc ggtcaaggaa ggcggctcac ggggtgtggc aggaagggtc aggtgtcgtt
      481 cctagcggca ggtggcgatg accgcaacat cgctccggcg ccgggcggcg gtgaaacggc
      541 atgtttcacg gggcggccat gaccgaactt catggctcgg cggtcactcg atgaccttgg
      601 gcaccatgaa gaaattgtcc tcggtcagcg gcgcgttggc gacgattttg tcggcatagc
      661 ccccgtcgct gaccttgtcc tcgcgacgcc tcagctgcat cggcgtgact gaggtcatcg
      721 gctcgacgcc ggcgacgtcg acttcgtcca gctgctcgac aaaacccagg atcgcgttga
      781 gttcgccctg gtatttctcg acctcggact cctcgatgcg gatgcgggca agacgcccga
      841 tgcgcctgac ggtctgggcg tcgacggcca tggaaatctc ctgtgctggc aggcttctag
      901 caggccgcag cctcaaacct caagggcaag tccgggctcg agcgacacca gcccggcgcc
      961 gtcgaggtgc tccgccagtt cggcgatgac ggtgtcgagc gtctggctgt cgagcgccag
     1021 cgccagcatc cggggccgcg cgacgtccag cagcaccgtc gcctccgcca ccagcgattc
     1081 gcgtcccgag gtcagcacca ccaccgcccc gtccgcccag cgcccgaagc gcggcagttc
     1141 acccgatccg agcaccacca gcggcggctc cccggcggcc gaaatcagca gcgccgcctc
     1201 gccgatgcgg acaacctcca ccggcggcgc cgcatcgatc gcccgccccg ccggccgcgg
     1261 ccgccaggac gcaggatcga ttagcggaat cgcccgatcc gcaagcgcca ccacgcggtc
     1321 cgccccggcc aggacttcgc cgcgatcgac gccgtccggg gccatctcgg ctccgatgac
     1381 cactatctcg ccgccgagat agatccgaag cgtcatgccg ccgaaccagg tgagcttcat
     1441 cgagtccttg ccctcttgag acccaacagc tagccaaatc cggtgagcgt tgacaggtcc
     1501 atccccgccc ttcccgcctc cggcaagctg ctcggcctcg atctgggcac caagaccatc
     1561 ggcgtcgcgg tgtccgatgg cgtccgctat tcggcgacgc cgctcgagac gatcagtcgg
     1621 accaaattca ccgaagacgc gctgcgcctg gccgaactgg tcgcggaaaa tgccgtggtc
     1681 ggcatcgtgc tggggctgcc gttgaacatg gatggatcgg aaggtccacg tgtccaggcg
     1741 acccgggcat ttgcccgcaa ccttggcgcc aagctattga ttcccatcgt gttctgggat
     1801 gagcgactgt cgacagccgc agtcaaccgc atgctgatcg aggccgatac ccgccgcagc
     1861 cgccgggcgg agatcgtcga caagctggct gcgagctaca ttcttcaggg atatctcgac
     1921 agcctgcgcc gctcgtagtg tcaaacccgt cgcagcagca agaatcgtac cgccatggcg
     1981 atggcccgag gtatctcacg atctcgcctg tagcccgcga tcgatcgcct tgatacgccg
     2041 aggtgagcag ccgcctcttc aatcgtcaga ccaagcccgg ccagagcagc gcagaactcc
     2101 tggctcgtca ttcgcgccaa tgccaagtct tgaagccacg aaagccctat ctcggaaccg
     2161 tcatcccata ctatcgatcg tccgtccggg gcggatttga ctgtgcggaa tagccgttca
     2221 tgcgaggaga ccggtctcct cgcaaacctg accagcaacg gtttgaggtc gataacctca
     2281 tccaagcccg agcgccaaaa caaatgcacc ttacgacctt cgaggggaac gacggcctcc
     2341 actcgatctc gaacctggga ggcgagttcg cccgttggca ccatggcggc aaggtagcct
     2401 tgacccggcg gctccgataa tccgtacctt tgcagaggat ccggggtagg aaacgacaac
     2461 atcaatattc caatcgtctc gcgccttctc gatccgtccg tcgcggatcg atgcctcgac
     2521 aaaacagaaa ccggaaatcc gaataacgaa actcatagtg ccctcctcta tccagggagc
     2581 accgtcgcaa gttctggcac ttatcgatat tcggcaaatt acgtagccaa gactgcaagt
     2641 caatatagtg ttcttttttt gttctcgtca acgcgttttg tgggtatgag ctggcggcgg
     2701 cttgccccac gctcctagct gggctagacc ccccgcgcat cgaggacgga gcggatgacg
     2761 agcgcctctt caggtcgaga gaccccagcc gccccgggcg gcaagcgccc attcccgcac
     2821 cgcaacctgc tcggcatctc acagctcaac cagtacgaaa tcctcgagct catcgaccgc
     2881 gccgaggcga tgatcccggt gtcgcggcag cagcgcaaat ccctgccaac cctcagcggc
     2941 aaaacgcaga tcaacctgtt cttcgagccg tcgacccgga cccaggccag cttcgagatc
     3001 gccggcaagc ggctcggggc gcaggtcacc aatatgtcgg tcaagacctc ctcggtcgcc
     3061 aagggcgaga cgctggtcga caccgcggcg acactcaacg ccatgcagcc ggacgtgatc
     3121 atcgtgcgcc atccggcgtc gggcgcggtg gaactgctca gccagaaggt cggctgcgcc
     3181 gtcatcaatg ccggcgacgg cgcacacgag caccccaccc aggcgctgct cgatgcgctg
     3241 acgatccggc agcacaaggg gcggcttgcc ggcctgacgg tcgccatctg cggggacatc
     3301 gcccactcgc gggtggcccg ctccaatctg ctgctgctgg gcgcactgca cgtgcgcacc
     3361 agggtgatcg cgccgaggac gctgctgccc aagggcatcg actccctgac cagcgaggtt
     3421 ttcaccgaca tgcgcgccgg gctcgagggc gccgacgtgg tgatgatgct gcgcctgcag
     3481 cacgagcgcg ccgctggccg gctcatccca tcggtgcgcg aatactaccg tttctatggg
     3541 ctggatgccg aaaagctcgc tctcgccaag cccgatgcga ccgtcatgca cccgggcccg
     3601 atgaaccgcg gggtcgagat cgatccggcg atcgccgatg ggccgcgctc ggtgatcacc
     3661 caccaggtcg agatgggggt cgcggtgcgg atggcggtgc tcgatgcact gctggccg
//
LOCUS       DATAZA010000524         2041 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1013962, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000524 DATAZA010000000
VERSION     DATAZA010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1013962"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..157
                     /locus_tag="VHZ56_13010"
     CDS             <1..157
                     /locus_tag="VHZ56_13010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019173352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HEX4298933.1"
                     /translation="VTRHMLGLANGRPGARTFRQILSVDAARRGAGPDVLLRALAAVE
                     PETAVAA"
     gene            complement(154..645)
                     /locus_tag="VHZ56_13015"
     CDS             complement(154..645)
                     /locus_tag="VHZ56_13015"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HEX4298934.1"
                     /translation="MPQRTDDERLLRAAFAVAQKARDGGDHPFGSVLADASGKVLREQ
                     GNGYTAEGHDRTAHAEKLLASWAAKSLSLEELRGCTLYTSAEPCAMCAGAIYWAGIGR
                     VVFGQTERDLKAATGAHAENPTLDLPCAIVFEAGQRPTELVGPLLADEAAALQDGFWD
                     AAP"
     gene            complement(703..1389)
                     /locus_tag="VHZ56_13020"
     CDS             complement(703..1389)
                     /locus_tag="VHZ56_13020"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02281 family clan AA aspartic protease"
                     /protein_id="HEX4298935.1"
                     /translation="MLFVGVALLVAVGIGLLVSADAGSLLGLSQTQFGQLIFLLILAV
                     LFAAGAFSRRQRFSTIIANVAVWAAIVVAALIGYTYREDIKGVAAQVFGELSPTSAII
                     DSRNGTASFRRGMDGHFEVEATVNGAAMPLMFDTGASAVVLSYADARKAGIDVDALDF
                     SMPVTTANGTGRAAEVTLDQLVVGNISRRDVRAFVAERGALDGSLLGMSFLETLNHYT
                     VAGDRLELAD"
     gene            complement(1480..>2041)
                     /locus_tag="VHZ56_13025"
     CDS             complement(1480..>2041)
                     /locus_tag="VHZ56_13025"
                     /EC_number="2.7.8.26"
                     /inference="COORDINATES: protein motif:HMM:NF014685.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008818 - cobalamin 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0051073 - adenosylcobinamide-GDP
                     ribazoletransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HEX4298936.1"
                     /translation="LAVGAMVTLTGAMSEDALADAADGLFGGPTIEERLAIMKDSRHG
                     TYGVCAIVLLIGLRITAIGSIANPLAAAGLFLAASLMARSGALWLSVALPAARSGGAS
                     ASAGAVSRQGFGIGAVFMVVLSFCLAGFAVGVLGLVLAYGLGALVIWGWTTLCRRLVG
                     GQTGDLIGALQALLEVTALTAFMLLA"
BASE COUNT          322 a          762 c          688 g          269 t
ORIGIN      
        1 ggtcacccgc cacatgctcg gcctcgccaa tggccgcccc ggcgcccgca cgttccggca
       61 gatcctcagc gtcgacgcgg cccgtcgcgg cgccggaccc gatgtgctgc tccgcgcgct
      121 cgctgcagtg gaaccggaaa ctgcagtcgc cgcctagggc gccgcgtccc agaagccgtc
      181 ctgcagcgcg gccgcttcgt ccgccagcaa tggccccacc agctccgtcg ggcgctgccc
      241 ggcctcgaac acgatggcgc agggcaggtc cagcgtcggg ttctcggcat gcgcgccggt
      301 cgccgccttg aggtcgcgct cggtctggcc gaacaccacg cgcccgatcc ccgcccagta
      361 gatggcgccg gcgcacatcg cgcagggttc ggccgaggtg tagagcgtac agccgcgcaa
      421 ttcctcgagg ctcagcgatt tcgccgccca cgaggccagc agtttttcgg catgcgcggt
      481 gcggtcgtgg ccttcggcgg tgtagccatt gccctgttcg cgcaggacct tgccggaggc
      541 gtcggcgagc accgagccga acggatggtc gccaccgtcg cgggctttct gcgccacggc
      601 aaaggcggcg cgcagcaggc gctcgtcgtc ggttcgttgc ggcatgcggg ggctccttgg
      661 gccgtactct ggcacggccg cggcctcgcg cggaagcccg cttcagtcgg cgagctcgag
      721 ccggtcgccc gccaccgtgt agtggttcag cgtctcgagg aagctcatgc cgagcaggct
      781 gccgtccagc gccccgcgtt cggcgacgaa ggcgcgcaca tcgcgccgcg agatgttgcc
      841 gacgacgagc tggtcgaggg tcacctcggc cgcccggccg gtgccgttgg cggtcgtcac
      901 cggcatcgag aaatcgagcg cgtcgacgtc gatcccggcc ttgcgcgcat cggcatagga
      961 cagcaccacg gcgctcgccc cggtgtcgaa catcagcggc atggcggcgc cgttgaccgt
     1021 cgcctcgacc tcgaaatggc cgtccatgcc gcgccggaag ctcgccgtgc cgttccggga
     1081 atcgatgatc gccgaggtcg gcgataactc gccgaacact tgcgctgcca cccccttgat
     1141 gtcctcgcga taggtgtagc cgatgagcgc cgcgacgacg atcgccgccc acaccgcgac
     1201 attggcgatg atggtcgaga accgctgccg ccgcgagaac gccccggcgg cgaacagcac
     1261 cgcgaggatc agcaggaaga tcagctgccc gaactgcgtc tgcgacaggc cgagcagcga
     1321 cccggcatcg gcgctgacca gcagcccgat cccgaccgcg accagcaaag cgacgccgac
     1381 gaacagcatg atcgctgaga tagggggtcg attggggcaa aatcaagcgg cagcggccgt
     1441 cgcccgggtt atcgtttgga gaggatcggc ccgcccgtct caggccagca gcatgaacgc
     1501 cgtcagcgcc gtgacctcga gcagcgcctg cagcgccccg atcaggtcgc cggtctgccc
     1561 gccgaccagt cgccggcaga gcgtcgtcca gccccagatg accagcgcgc cgagcccgta
     1621 ggcaagcacc agcccaagca ccccgaccgc aaagcccgcg aggcagaagc tcagcaccac
     1681 catgaacacc gcgccgatcc cgaacccctg ccgcgacact gcgccggcgc tggccgaggc
     1741 gccgccactc cgggcggcag gcagcgccac gctgagccac agcgcgccgg accgcgccat
     1801 cagcgacgcg gcgaggaaca gccccgccgc tgccagcggg ttggcgatcg agccgatcgc
     1861 ggtgatgcgc agcccgatca gcagcacgat ggcgcagacg ccataggtgc cgtgccggct
     1921 gtccttcatg atggcgaggc gttcctcgat cgtcgggccg ccgaacagcc cgtcggccgc
     1981 gtccgccagc gcgtcctcgc tcatcgcgcc ggtgagcgtc accatggcgc cgaccgccag
     2041 c
//
LOCUS       DATAZA010000525         1539 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3800414, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000525 DATAZA010000000
VERSION     DATAZA010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1539
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3800414"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1068
                     /locus_tag="VHZ56_13030"
     CDS             <1..1068
                     /locus_tag="VHZ56_13030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEX4298937.1"
                     /translation="LYHFVLAYSAWEHAELVLGGESFTALAVGLQNALWMLGGVPAEH
                     RSDSLSAAFRNLDDDARLDQTRRYEAFCVHYGMTPTRNNTGVAHENGAIESQHGHLKR
                     RVAQALLLRGSADFASLDAYRAWIADFIGRRNARRGKMVRLEATALHALPSRRTTDYD
                     EATVFVTSSSGFVLRKVFYTVPSRLIGFRMRVRIYDDRLDCIVGDSPVLTLRRGRSGA
                     DGRHGHVIDYRHVIHSLRRKPMALLNLVYRDALFPRPAYRLAWERLLADGDASAACKT
                     MVALLLLAHESGHEAELAVALSDLMGQNAGAEINGGFAIDLAALRTRFATVRGIMPDI
                     VVTLPSVASYDTLLPSMGQAA"
     gene            1065..>1539
                     /locus_tag="VHZ56_13035"
     CDS             1065..>1539
                     /locus_tag="VHZ56_13035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018268833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4298938.1"
                     /translation="MNDRISDTITVDTARLPLLLNELRLPTIGAMWSSFTERADREGW
                     PAARLLATLTELELAERAQRRIQRHMVEAHLPSGKTLDTLDFAALPMLSRAHITALVS
                     GDGWINSGGTILLFGPSGSGKSHLAAAFGHALVENGYRVLFTRTTDLVQRLQQARQ"
BASE COUNT          252 a          526 c          467 g          294 t
ORIGIN      
        1 ctctatcact tcgttctggc ctattccgcc tgggagcatg ccgagttggt gctcggcggc
       61 gagagcttca cagccctcgc ggttggtctg cagaacgctc tctggatgct gggcggcgtg
      121 cccgccgaac atcgttcgga cagcctgtcc gccgccttcc gcaacctcga tgacgatgcg
      181 cgtctcgatc agacacgacg ctacgaggcc ttctgtgtcc attacggcat gacgccgacc
      241 cgcaacaaca ccggcgtggc gcatgagaac ggcgcgatcg agagccagca tgggcatctc
      301 aagcgtcgtg ttgcccaggc ccttctgctc cggggtagtg ccgacttcgc tagtctcgac
      361 gcctaccgcg cctggatcgc cgacttcatc ggtcgtcgca atgcccggcg cggcaagatg
      421 gtgcgcctgg aagccacggc cctgcacgcg ctgccgtctc gacgaacgac cgattacgac
      481 gaggccacgg tgttcgtgac ctccagcagc ggcttcgttc tccgcaaggt cttctacacc
      541 gtcccatccc ggctgatcgg ctttcggatg cgggtgcgga tctatgatga tcggcttgat
      601 tgcatcgttg gcgacagccc ggtcctgacg ctgcgccgtg gtcgcagcgg cgccgacggg
      661 cgacatggcc atgtcatcga ctaccggcac gtcatccaca gtctgcgtcg caagccgatg
      721 gctctgctta accttgtcta tcgcgacgct ttgttccccc ggccagccta tcgcctggca
      781 tgggagaggt tgctggccga cggtgatgcg tctgccgcct gtaagacgat ggtggcgctt
      841 ctcctcctcg cccatgagag cggccatgag gcggaactcg ccgtcgccct gagtgacctg
      901 atggggcaaa acgccggggc tgagatcaat ggcggcttcg ccattgatct cgcggcgctg
      961 aggacccggt tcgcgacggt gcggggcata atgcccgata tcgtcgtcac cctcccatcc
     1021 gtcgccagct acgacacgtt gctcccctcg atgggacaag cagcatgaac gacaggatca
     1081 gcgacaccat caccgtcgac accgctcgct tgcccttgtt gctcaatgaa ttgcggctgc
     1141 cgactatcgg ggccatgtgg tcgagcttca cggagcgtgc cgaccgagaa ggttggccag
     1201 cggcgcggct gctggccaca ctcaccgagc tggagctcgc cgagcgggcc cagcgacgca
     1261 tccagcgaca catggtcgag gcgcatctgc cctccggcaa gaccttggat accctggact
     1321 tcgccgccct gcccatgctc agtcgtgcgc atatcaccgc cctcgtgagc ggcgacggct
     1381 ggatcaactc gggcggcacc atcctgttgt tcggcccgag cggctccggc aagtcgcatc
     1441 tcgccgcggc cttcggtcac gccctggtcg agaacggcta ccgggtcctc ttcacccgaa
     1501 caaccgatct cgttcagcga ctgcagcaag cacgtcaat
//
LOCUS       DATAZA010000526         1745 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3106534, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000526 DATAZA010000000
VERSION     DATAZA010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3106534"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..548)
                     /locus_tag="VHZ56_13040"
     CDS             complement(<1..548)
                     /locus_tag="VHZ56_13040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019965539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX4298939.1"
                     /translation="MSDAAPARLLDLWDDAKAAGMTEPERLVYRSNILGSDKRVTNYG
                     GGNTSSKITETDPLTGETVEVLWVKGSGGDSASIKLDGFSTLYMDKLRALKKLYRGVQ
                     FEDEMVGYLPHATFNLNPRAASIDTPLHAFVPHAFVDHMHPDAIIAIAASKDSKALTR
                     EIFGDEIGWLPWKRPGFELGLWL"
     gene            727..1536
                     /locus_tag="VHZ56_13045"
     CDS             727..1536
                     /locus_tag="VHZ56_13045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015319233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family DNA-binding transcription
                     regulator"
                     /protein_id="HEX4298940.1"
                     /translation="MHEAERHRVILSAVQSRPVATVSDLVELTGTSEATIRRDIAALH
                     LSGKLRRVRGGAEAVNPPSQSGLVGRPFSVNETINVAAKRAIAKAAAELCADGEPIII
                     NGGTTTYQMVYPLALRRMQVFTNSFVIAEHLLHHSKNAVMLPGGTIYRDQNIILSPFD
                     NDVSRNFYARKMFMGAQGVGPHGIMEADPLLIQAEQKLISQADELILLVDSSKFRSRS
                     SLILCPLERAHTVITDRGVRDEDRHMLDSAGIRLIVAEAGEVPQEDSASVA"
     gene            1576..>1745
                     /locus_tag="VHZ56_13050"
     CDS             1576..>1745
                     /locus_tag="VHZ56_13050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009363822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnose ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX4298941.1"
                     /translation="MSLLKKLALTTAIAAVMIGGAMPAAMADNLKIALLVKNLGNGFF
                     DAANKGAQEAAK"
BASE COUNT          333 a          566 c          533 g          313 t
ORIGIN      
        1 agccatagcc cgagctcgaa ccccggccgc ttccacggca gccagccgat ctcgtcgccg
       61 aagatttccc tggtgagcgc cttggaatcc ttgctcgccg cgatggcgat gatcgcatcg
      121 ggatgcatgt ggtcgacgaa cgcatgcggc acgaaggcgt gcagcggcgt atcgatcgag
      181 gcagcgcgtg gattgaggtt gaacgtcgcg tggggcaggt accccaccat ctcgtcttcg
      241 aactgcacgc cgcgatagag cttcttcagc gcccgcagct tgtccatgta gagcgtcgag
      301 aatccgtcga gcttgatcga ggcgctgtcg ccgcccgagc ccttcaccca cagcacctcg
      361 acggtctcgc cggtgagcgg atcggtctcc gtgatcttcg atgatgtgtt gccgccgcca
      421 tagttggtga cgcgtttgtc cgagcccagg atgttggagc ggtagaccag ccgttccggc
      481 tcggtcatcc cggccgcctt ggcgtcatcc caaagatcga ggagccgcgc gggcgcagca
      541 tcggacattc gaacctcccc gtaagatgtc gtgttcttgg tcgctgacat gagcccaagc
      601 cccgagagct gtcaatcaga aacgatcatc atcagtcatc gttcgggagc atgtgagcgg
      661 aactgatcga aacctgattg acattgattg gtgaccatgg aacgacatgc ggtgggagaa
      721 ggaaaattgc acgaagctga gcgccacagg gtcatcctga gtgcggtgca gtcgcgacct
      781 gtcgcgaccg tatcggacct ggtcgagctc accggaacgt cggaagcgac gatccggcgc
      841 gacatcgctg cgctgcacct ttcgggcaag ctccgccgcg tgcggggagg ggccgaggcg
      901 gtcaatccgc ccagccagtc cggccttgtc ggccgcccgt tctcggtcaa cgagaccatc
      961 aacgtcgccg ccaagcgcgc catcgccaag gctgccgccg agctctgcgc cgatggcgag
     1021 ccgatcatca tcaatggcgg caccaccacc taccagatgg tctatccgct ggcgctccgg
     1081 cgcatgcagg tgttcaccaa ttccttcgtc atcgccgagc acctgctgca tcattccaag
     1141 aacgcggtga tgctgcccgg cggcaccatc taccgcgacc agaacatcat tctgtcgccg
     1201 ttcgacaacg acgtgtcccg caatttctac gcgcgcaaga tgttcatggg cgcgcagggc
     1261 gtcgggcccc atggcatcat ggaggccgac ccgctgctga tccaggccga gcagaagctc
     1321 atcagccagg cggacgagct gatcctgttg gtcgattcgt ccaaattccg gtcgcgctcc
     1381 agcctcatcc tttgtccgct ggagcgtgcc cacaccgtca tcaccgatcg cggcgttcgc
     1441 gacgaggacc ggcacatgct agattctgcc ggaattcgcc tcatcgtcgc cgaggccggt
     1501 gaggttccgc aggaagactc ggcgtcggtt gcctgacggc ggccggcaaa acactagagc
     1561 tcagggagga aacatatgag cttgctgaag aaactggccc tcaccacggc catcgccgcg
     1621 gtgatgatcg gcggggcgat gcccgccgcc atggccgaca atctgaagat cgcactcctg
     1681 gtcaagaacc tcggcaacgg cttcttcgac gccgccaaca agggcgccca ggaagccgcc
     1741 aagga
//
LOCUS       DATAZA010000527         6965 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1711184, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000527 DATAZA010000000
VERSION     DATAZA010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6965)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6965)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6965
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1711184"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(161..1198)
                     /locus_tag="VHZ56_13055"
     CDS             complement(161..1198)
                     /locus_tag="VHZ56_13055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011578928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4298942.1"
                     /translation="MSVGYQKRLGFGIVGLGMVATAHARALADLQDRVEVRGVFGRGN
                     MRREAFSRQYSLPAANSVEALLADPGVDAILLLTPPNARREIVEAAAAAGKHVLSEKP
                     LERNGDAALEIVEICERAGVTLGVVFQHRFRAASIALKQLVDSGELGRMALVQVNVPW
                     WREQSYYDQPGRGTYARDGGGVLISQAIHTLDLMLSITGPVTEVAAVAGTTFLHRMEA
                     EDFAGAGLRFTNGALGVLAATTAAFPGSAESIVITFERGAARLQGGTLTVTRMDGGTT
                     MTGEPAGTGGGADPMAFPHDWHRDLIADFVAAVREGRQPAVSGREALKVHRLIDALVL
                     SSREKRTIAVG"
     gene            1333..2034
                     /locus_tag="VHZ56_13060"
     CDS             1333..2034
                     /locus_tag="VHZ56_13060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011578937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX4298943.1"
                     /translation="MPRAVAPIPALPGAGRATMSGRVYQALRKAILSLHLKPGDSLSE
                     ADMAAQLGTSRQPVREAFIKLSETGFVDIVPQRGTFVMRISSHEVSNARFIREHVETA
                     IVRRASELGSPANISRLKALLGEQRLAGGSGDHDKFIELDDAFHHAIAVCAECGSAWR
                     VIDELKGQMDRVRYLSVHEATPIPKLIEQHQAIVAAIEAHDPEAASEAMHRHLSEMLN
                     SLPVLAARHAELFSD"
     gene            complement(2064..3251)
                     /locus_tag="VHZ56_13065"
     CDS             complement(2064..3251)
                     /locus_tag="VHZ56_13065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="HEX4298944.1"
                     /translation="MLSVPHDFQADLDSVAEIGVIPKILDVISRSTGMGFVAVARVTE
                     TRWITCAVKDDINFGLVPGSELEVKSTICDEIRDSREGVVIDHVAEHPHFKTHHTPLQ
                     YGFESYISMPITMPDGEFFGTLCAIDPRPAKLDTPETIGMFQLYCDLIAMHLQDVREN
                     VANKKLLMDERGTAELREQFMAVLGHDLRNPLASITAGAQMLEREPLTEKSKTIVGLM
                     LKSSRRMRDLVENVLDFARGRLGGGIQVDHSNDAPIGPVLEQVIAELRTIHPDRDIRT
                     ALNIVERVPLDQRRLGQLLSNLLGNAIAHGAADHPIVVSAATSGGGGFRLYVTNGGEP
                     IPAEILPTIFEPFVRSNKKSGGEGLGLGLYIANAIAKAEGGMLTVSSTPDETRFTFER
                     PAP"
     gene            complement(3358..4101)
                     /locus_tag="VHZ56_13070"
     CDS             complement(3358..4101)
                     /locus_tag="VHZ56_13070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008878390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX4298945.1"
                     /translation="MRWSAVYLGLRDAILTHALGPGTKLPEDELGEVYSVSRTIVRSA
                     LQSLAHDRLVTLEPNRGAFVAKPTKIEAREVFEARALIEPKVAGLAAEVARPADVALL
                     RRHLEEEHDAMHAGRDGEAVVLSGRFHVAIAEIAGQSILTDFVRGLCSRSSLIIALYW
                     HRRDAICESHAHLALVEAIGKNSPRDATELMTSHLVDLLSGLDLTDHPAATTRLVDIL
                     RPTLHSKAAPSLRRHSLDASVAARLPPKE"
     gene            4458..5651
                     /locus_tag="VHZ56_13075"
     CDS             4458..5651
                     /locus_tag="VHZ56_13075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012708592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4298946.1"
                     /translation="MATRRSTLTILGAASAIAITAALTLPSFANDTLKIGFVGVTSGP
                     DAAWGTSNVRSMQTLADIWNAAGGVKIGDKTYDVDIVTFDDQADPKVAIQGMEKMAEE
                     GIHYVVGPNVDDTAAAVRPPAEKNNIMYFPYSFPKTLYTAPAENAVLGMIANYQSGPA
                     IYKYLMDNKGVKSVAFLAANESDALSQRDSGAAAAKALGLNVVAATDTYPSDTTDFAP
                     VVGPIVGLKPDLLVLSGVAPATAPLVIRAAREAGYTGLISTETAQDANVLKEGAGDLA
                     NGFISVGGASTPEIASDQMKAFVAAYTKKFGEYNDESNTKVYALEYIVDTIKADPAAI
                     DDIKEFQKTMDTFSAPNPYLKGDAKLTYVGDTSFGQKRQLAVPMVVNEYEGGDFKTLF
                     VGTVD"
     gene            5722..6588
                     /locus_tag="VHZ56_13080"
     CDS             5722..6588
                     /locus_tag="VHZ56_13080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012708593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX4298947.1"
                     /translation="MEQVVVNGLYLGAQYALIALGLTLIFALMNVLNFAHGQMYVLGG
                     FVTYTVYSQWHLPFVVALVASSITLAVLGALIEKFLFRPVIRRSKRDESTMLLAAAVA
                     FFLDAVILLVFGEKGHGVPKIVDGLLNVPGLIIPYDRLLVGGLAVVFIAAFMAFMQFS
                     KTGRAMRALAQDRQAAQLMGVNVDRYSMIGFALGALLAGLVGGLLVSITGVSSGIGGA
                     ISTKAFLMVMIGGAGVVGGAILGGFILGMLEAVGLTVLHSYGDITYLVIFAALMIFLA
                     IRPNGLMGKPWG"
     gene            6598..>6965
                     /locus_tag="VHZ56_13085"
     CDS             6598..>6965
                     /locus_tag="VHZ56_13085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008878386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX4298948.1"
                     /translation="MRLQLIGFAVFAVVMIAIVPPIIEATGRSDLYYTLTLISILAVA
                     SAGVWITFYIGRINIGQAAYALIGGYVSAILVLDYGVSFWWTIPIAGLVSAVVSILIG
                     LPILRLRGVYFAMVTLVSTEV"
BASE COUNT         1255 a         2301 c         2107 g         1302 t
ORIGIN      
        1 agccggcgag cgtttccggc tcgccatcgc tccaccagcc ggcgcactcg ccaccggcgg
       61 cgagcatgcc gcccaccatg tcgaagatgt gccgatgatc gaggccgatt gccgcaaatc
      121 tcactggccg tgccatagtc ccaattccca ttcctgccgg tcagccgacc gcaattgtcc
      181 gtttctcgcg tgacgacagc accagtgcgt cgatcagccg gtgcaccttc agcgcctccc
      241 gtccggagac cgccggctgc cgcccctccc tcaccgccgc gacgaaatcg gcgatcaaat
      301 cgcgatgcca gtcatgcgga aacgccatcg gatcggcacc gccgccggtg ccggcgggct
      361 cgcccgtcat cgtggtgccc ccgtccatac gcgtaaccgt cagtgtgccg ccctgcagcc
      421 gcgccgcgcc gcgctcgaag gtaatgacga tggattccgc gctgcctgga aatgccgctg
      481 tcgttgcggc cagcacgccg agtgcaccat tggtgaagcg cagtccggcg ccagcgaaat
      541 cttcggcttc catgcgatgg aggaacgtcg ttccggctac tgccgccact tcggtcaccg
      601 gcccggtgat cgacagcatc aggtcgagcg tgtggattgc ctggctgatc agcacgccgc
      661 caccatcgcg ggcgtaggtg ccgcgccccg gctggtcgta ataggattgc tcgcgccacc
      721 acggcacgtt gacctgcacc agcgccatgc gcccaagctc gccgctgtcg accaattgct
      781 tcagcgcgat agaggccgcg cggaagcgat gctggaacac caccccgagg gtcacgccgg
      841 cgcgctcgca gatttcgacg atctcgagtg ccgcgtcgcc atttcgctcg agcggctttt
      901 cgctgaggac atgcttgccg gctgcagctg ccgcttcgac gatctcgcgc cgcgcattgg
      961 gcggtgtcag cagcaggatg gcatcgacgc ccgggtcggc gagcagcgcc tcgaccgagt
     1021 tcgccgccgg gagagaatat tgccgcgaga acgcttcgcg ccgcatatta ccccggccaa
     1081 agacgccgcg aacttctact cggtcctgca ggtccgcaag cgccctcgca tgagccgtag
     1141 ccaccatgcc gaggccgact attccaaatc cgagacgttt ctggtatccc acggacatta
     1201 ttccaacagg tcgcctgcgt gttttccgct tgtttcaatg gtcttcgggc catatcgatc
     1261 gttcagcgtc cgcagccggc cgtctagtat ggtagtatga cgaagcaatc aagcgcgatt
     1321 agcgaagccg acgtgccgcg tgccgttgcc ccgatccccg ccctccccgg cgccggccgc
     1381 gccacgatgt ccggccgcgt ttaccaggcc ctccgcaagg cgatcctgtc gctgcacctc
     1441 aagccgggag actccctgtc ggaggccgac atggctgccc agctcggcac ctcgcggcaa
     1501 ccggtgcgcg aggctttcat caagctgtcg gagactggct tcgtcgacat cgtgccacag
     1561 cgcgggacgt tcgtgatgcg aatttcatcg cacgaggtct ccaatgcccg cttcatccgc
     1621 gagcatgtcg aaactgccat cgtgcggcgc gcctcggaac tcggctcacc tgccaatatt
     1681 tcacggctca aggcactgct cggcgagcag cggcttgcgg gcggcagtgg cgaccatgac
     1741 aaattcatcg agctcgacga cgccttccac cacgcgatcg ccgtctgcgc cgagtgcggc
     1801 tcggcctggc gcgttatcga cgaactgaag ggccagatgg accgggtacg ctacctctcg
     1861 gtccacgaag cgacgccgat ccccaagctg atcgaacagc accaggccat cgtcgcggcc
     1921 atcgaagcgc atgaccccga ggcagcgagc gaggcgatgc acaggcacct gtcggaaatg
     1981 ttgaactcgc tgcccgtcct cgccgcgcgc cacgccgagc tattctccga ctagcgtccc
     2041 gctgcggcag cgtgaagact gtgctagggg gctggacgct caaacgtgaa gcgagtttca
     2101 tcgggggtcg acgacaccgt cagcatgccg ccttccgcct tcgcaatcgc attggcgatg
     2161 tagaggccaa ggccaagacc ttcgccacct gacttcttgt tggaccgcac gaacggctcg
     2221 aaaatcgtcg gcaagatttc ggcaggtatc ggctcgccgc catttgtgac gtagaggcga
     2281 aaaccgcccc ctccgctcgt tgcagcgctc accacaatgg gatggtccgc cgcgccgtgc
     2341 gcgatggcat ttccgagaag gttggagaga agttgtccaa ggcgcctctg gtcgagaggc
     2401 acccgctcca cgatattgag cgctgttcta atgtcccgat ccgggtgaat ggtgcgaagt
     2461 tcggcaatga cctgttccag caccgggccg atgggagcat cgttgctgtg gtcaacttga
     2521 attccgccac ccaatcggcc gcgggcgaaa tcgaggacgt tctcgacaag gtcgcgcatg
     2581 cgtcggctgc tcttgagcat gagcccgacg atcgtcttgg acttctctgt caggggctcg
     2641 cgctcaagca tctgcgcgcc cgcggtgatc gaggccagcg gattgcgaag gtcgtgacca
     2701 aggacggcca tgaactgttc gcgaagctcc gcggtgccac gctcatccat cagcagcttc
     2761 ttgttggcga cgttctctcg aacgtcctgg aggtgcatgg cgatgagatc gcagtagagt
     2821 tggaacatcc cgattgtttc gggtgtatcg agcttggccg gtcgcggatc gatggcacag
     2881 agcgttccga aaaactcgcc gtccggcatg gtgattggca tcgagatgta agactcaaag
     2941 ccatactgga gcggagtgtg atgcgtcttg aagtgcggat gctcggcaac gtggtcgatg
     3001 accacgcctt cgcgggagtc gcgaatctcg tcgcagatgg tcgatttgac ttcgagctca
     3061 ctgccgggca cgagcccgaa gttgatgtcg tccttgaccg cacacgtgat ccagcgggtc
     3121 tctgtaaccc tcgcaacggc cacaaagccc atgccggtcg aacgagaaat cacgtccaag
     3181 atttttggga tgacaccaat ctcggccacc gagtccagat cggcctgaaa atcgtgcggg
     3241 acgctcaaca tcctcaccat ccccaacctc ccaaagcggc gttccgccgt tcaaccgccg
     3301 aaccccgcca aaggcgattg ccacggttgt cctcgttgcg aaacccaccg acgaaattca
     3361 ttccttcggg ggcaagcgcg ccgccacaga agcatccagc gaatgcctcc gaagcgaggg
     3421 ggccgccttg gagtgcagag tcgggcgcag gatatcgacc agccgcgtcg tcgcggcggg
     3481 atggtccgtc aggtcaagcc ccgacaacag gtcgacgagg tgactggtca tcaattccgt
     3541 cgcgtccctc gggctgttct tgccaatcgc ctcgacgagg gcgagatgcg cgtggctctc
     3601 gcatatggcg tcgcgccgat gccagtagag cgcgatgatc agcgacgagc gcgagcagag
     3661 cccacggacg aagtcggtca ggatcgactg tccggcgatt tcagcgatgg cgacgtggaa
     3721 gcgaccggag agcaccacgg cttcgccgtc gcgtccggcg tgcatggcgt cgtgttcttc
     3781 ctcgaggtgc cggcgcagga gggcgacgtc ggcgggtctg gcgacttcgg cggcgaggcc
     3841 ggccactttc ggctcgataa gggcccgcgc ctcgaacact tcacgcgctt cgatcttggt
     3901 gggcttggcg acgaacgcgc cgcggttggg ctcgagcgtc accagacggt cgtgcgccag
     3961 cgactgcagc gccgaccgca cgatggtgcg gctgacggaa tagacttcgc cgagttcatc
     4021 ctcgggcagt ttcgtacccg gacccagggc gtgcgtcaga atggcgtcgc gcagccccag
     4081 atacacggcc gaccatcgca tcgctggctt ggcagcgacg ccctcgaggt cgtcgggacc
     4141 gatggtgagg ggcagcgggc ggacggatgc agagctcata tcgacagcga tgatagcgga
     4201 gcgacaccgc ataatccaag gagatattgt atacataaca gacaagcgat cgtctctcct
     4261 gaccccttcg ttccctcgct cgcctgcaag ggctggccac aaggcccgcc gaatgaaccg
     4321 ttgggcattg gttgtgcacc agttgcaaaa tctttgtgca caatgatcgt atacaatcct
     4381 tgactcggct tcgctgcggc gcttagcttt acgggcgagt tacggaagcc ggggtcattg
     4441 ctcttgggag atgcaacatg gctacccgac gttcaacact gacaattctc ggcgcggcat
     4501 cggcgatcgc catcacggct gcgctgacgc tgccaagctt cgccaacgac acgctgaaga
     4561 tcggcttcgt cggtgtcacc agcggcccgg atgccgcctg gggcacctcc aacgtccgct
     4621 cgatgcagac gctcgctgac atctggaatg ccgctggcgg cgtcaagatc ggagacaaga
     4681 cctacgacgt cgacatcgtt accttcgatg accaggccga ccccaaggtc gcgatccagg
     4741 gcatggagaa gatggcggag gaaggcatcc actacgtcgt cggccccaat gtcgacgaca
     4801 ccgccgcggc cgtccgcccg ccggcggaaa agaacaacat catgtatttt ccctactcgt
     4861 tccccaagac gctctacacc gcgcccgccg agaacgccgt tctgggcatg atcgccaact
     4921 accagtcggg tccggcgatc tacaaatatc tgatggacaa caagggcgtg aaatcggtgg
     4981 cgttccttgc cgccaatgaa tccgatgccc tcagccagcg cgacagcggc gccgctgccg
     5041 ccaaggcgct cggcctcaat gtggtggccg cgaccgacac ctatccaagc gacacgaccg
     5101 actttgcacc ggtcgtcggc ccgattgtcg gcctcaaacc cgacctgctg gtgctttcgg
     5161 gcgttgcgcc ggcgacggcg ccgctggtga tccgtgcggc ccgcgaggcc ggctataccg
     5221 gcctcatctc aaccgagacc gcgcaagacg caaatgtgct gaaggaaggc gccggcgatc
     5281 tggccaatgg cttcatctcg gtgggtggcg cctcgacgcc ggaaattgcc tcggaccaga
     5341 tgaaggcgtt cgttgccgcc tacacgaaaa agttcggcga atacaacgac gagtccaaca
     5401 ccaaggtcta cgcgctcgaa tatatcgtcg acacgatcaa ggccgacccg gccgccatcg
     5461 acgacatcaa ggagttccaa aagaccatgg acaccttctc ggcgcctaac ccgtacctca
     5521 agggcgacgc gaagttgacc tatgtcggcg acacctcgtt cggccagaag cgtcagctcg
     5581 ccgtgccgat ggtggtcaac gaatacgagg gcggcgactt caagacgctg ttcgtcggca
     5641 cggtcgactg acctccggcg cacctgaact cccggagccg gacatcacgt tcggcttcgg
     5701 ctcaacgggg caacggggtg aatggaacaa gtcgtcgtca acggcctcta tctgggcgcc
     5761 cagtatgcgc tcatcgcact gggcctgacc ctcatcttcg ccctgatgaa cgtgctcaat
     5821 ttcgcgcacg gccagatgta cgtgctgggc ggcttcgtta cctacacggt ctacagccag
     5881 tggcacctgc cgtttgtcgt ggcgctcgtc gcctcctcga tcacgcttgc ggtgcttggc
     5941 gcgctgatcg agaaattcct gttccggccg gtgatccgcc gcagcaagcg tgacgagagc
     6001 accatgctgc tcgccgccgc ggtggccttc ttcctcgacg ccgtcatcct gctggtcttc
     6061 ggcgaaaagg gccacggcgt ccccaagatc gtcgatggcc tcctcaacgt cccgggcttg
     6121 atcattcctt acgatcgcct gctggtcggc ggcctcgccg tcgtcttcat cgctgccttc
     6181 atggccttca tgcaattttc caagaccggc cgcgccatgc gcgccctggc gcaggaccgg
     6241 caggcggccc agctcatggg cgtcaacgtc gatcgctact cgatgatcgg ctttgccctc
     6301 ggcgcgctgc tcgccggtct cgttggcggt ctgctcgtct ccatcaccgg cgtcagttcc
     6361 ggcatcggcg gcgccatctc caccaaggcg ttcctgatgg tgatgatcgg cggcgccggg
     6421 gtcgtcggcg gcgccatcct gggcggcttc atcctcggca tgctcgaggc agtcggcctg
     6481 accgtgctcc actcttacgg cgacatcacc tacctggtga tctttgccgc gctcatgatc
     6541 ttcctcgcca tccgccccaa cgggctgatg ggaaagccct ggggctgagc catgggcatg
     6601 cggcttcaac tcatcggatt tgccgtcttt gcggtggtga tgatcgcgat cgttccgccg
     6661 atcatcgagg caacgggccg cagcgacctc tactacacgc taaccctgat ctcgatcctt
     6721 gcggtcgcca gcgccggcgt ctggatcacg ttctacatcg gtcgtatcaa catcggacag
     6781 gcggcctatg cactgatcgg tggctacgtc tcggccatcc tggtcctcga ctacggcgtc
     6841 tcgttctggt ggacaattcc aattgccgga ctggtctcgg ctgtcgtcag tatcctgatc
     6901 ggcctgccga tcctcaggct gcgcggtgtc tactttgcca tggtcacgct ggtctcgacc
     6961 gaagt
//
LOCUS       DATAZA010000528         1913 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1364361, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000528 DATAZA010000000
VERSION     DATAZA010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1913
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1364361"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..307
                     /locus_tag="VHZ56_13090"
     CDS             <1..307
                     /locus_tag="VHZ56_13090"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018067039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEX4298949.1"
                     /translation="TVDPQAMAKKLRNYGSLFIGPLASVVYSDKCIGTNHTLPTMGAG
                     RYTGGLWVGAYVKIATHQWIDERGVRAVAPPAARQSASETLEGHRRAAQLRLDRMQG"
     gene            complement(431..1129)
                     /locus_tag="VHZ56_13095"
     CDS             complement(431..1129)
                     /locus_tag="VHZ56_13095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HEX4298950.1"
                     /translation="MPISAATLAILRRHDTPTICNALEHVMGGRTAEGFSKSPVVCAD
                     PALPPVVGFARTAKIRATSPAQRPAAEVRALRMAYYEHMVSGEGPTVAVIEDTDWPHC
                     IGGFWGEMQVAQHKGLGVAGTVTNGVLRDLGMLDPGYQVIAGSVGPSHAFVHVTELDC
                     VVTVFGMTVRPDDLVHADRHGAVVIPAEHIERMPAAIDIVLRKEQPVLQAARAPGFTI
                     EKLKAAWLEADQIK"
     gene            complement(1131..>1913)
                     /locus_tag="VHZ56_13100"
     CDS             complement(1131..>1913)
                     /locus_tag="VHZ56_13100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007199006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyalkane--coenzyme M transferase"
                     /protein_id="HEX4298951.1"
                     /translation="ITVKTLEPLHDDIRNFQSALKAGGYANGFMNSAAPGVIALFQPN
                     EYYKTQDDYLEAVAEGMRAEYEGIVAAGLILQLDSPDLGLGRHMMYKELSDEDFVKRA
                     GRHIEVLNHALRNVPGDRVRMHVCWGNYEGPHNCDIALKKVLPAILKAKPRALLFEAM
                     NPRHAHEWIDWKNVDLPDDYVLIPGMLDSTTNFVEHPEFIAERLMNFVDIVGPDRVIA
                     GTDCGFSTFAGFGTVDPDIVWLKLKSLREGADLVSERLKLAA"
BASE COUNT          311 a          588 c          688 g          326 t
ORIGIN      
        1 cacggtcgat ccacaggcga tggcgaagaa gctgcgcaac tatggctcgc tgttcatcgg
       61 gccgctggcg agcgtggtct attccgacaa atgcatcggc accaaccaca cgctgccgac
      121 gatgggcgcc gggcgctaca ctggtgggct gtgggtgggc gcctatgtga agatcgcgac
      181 gcaccagtgg atcgacgagc gcggcgtcag ggccgtggcg ccgccggcgg cgcggcagag
      241 cgcgagcgag acgctcgagg gtcatcgccg cgccgcgcag ctgcggctcg accgcatgca
      301 gggttagtca agttcaccaa cgaacgggcc atccgcgcga aagcgcgacc gctgctttgt
      361 atcagcgtga ggtaaacggg ggctccccgc tttcgaggga atgactcccg gtgcggtgca
      421 gctcgccgcg ctacttgatc tggtcggctt ccaaccaggc cgccttcagc ttttcgatgg
      481 tgaagccggg ggcgcgggcg gcctgcagca ccggctgctc cttgcggagc acgatgtcga
      541 tcgccgccgg catccgctcg atgtgctcgg cgggaatgac gacggcgccg tggcggtcgg
      601 cgtggacgag atcgtcgggc cgcacggtca tgccgaatac ggtgaccacg caatcgagct
      661 cggtgacgtg gacgaaggcg tggctgggac cgacggaacc ggcgatcacc tggtagcccg
      721 gatcgagcat gccgagatcg cgcagaacgc cgttcgtgac ggtgccggca acgcccaggc
      781 ccttgtgctg ggccacctgc atctcgcccc agaagccgcc gatgcagtgc ggccagtcgg
      841 tgtcctcgat caccgcgacg gtcggcccct cgccgctcac catgtgctcg taataggcca
      901 tgcgcagcgc gcggacctcg gccgccggcc gctgcgctgg cgaggtggcg cgaatcttcg
      961 cggtgcgggc gaagccgacg accggcggca gggccggatc ggcgcagacc accggggact
     1021 tgctgaagcc ctcggcggtg cggccgccca tcacgtgctc gagcgcgttg cagatggtcg
     1081 gcgtgtcgtg ccggcggagg atcgcgagcg ttgcggcact gatgggcatg tcaggcggcc
     1141 aatttcaggc gttcgctgac gagatcggca ccttcgcgga gggacttgag cttcagccag
     1201 acgatgtcgg gatcgacggt gccgaagccg gcgaaggtcg aaaagccgca atcggtgccg
     1261 gcgatgacac ggtcgggtcc gacgatgtcg acgaagttca tcagccgctc ggcgatgaat
     1321 tccggatgct cgacaaagtt ggtggtcgag tcgagcatgc cggggatcag cacgtagtcg
     1381 tcgggaagat cgacgttctt ccagtcgatc cattcgtgcg cgtggcgcgg gttcatcgcc
     1441 tcgaacagca gggcgcgtgg cttggccttg aggatggcgg ggagcacttt tttcagggca
     1501 atgtcgcagt tgtgcggacc ctcgtaattg ccccagcaca catgcatgcg aacccggtcg
     1561 ccggggacgt tgcggagcgc gtggttgagc acttcgatgt ggcgcccggc gcgcttgacg
     1621 aagtcctcgt cgctcagctc cttgtacatc atgtgccggc cgagcccgag gtcggggctg
     1681 tcgagctgga ggatcagccc agcggcgacg atgccctcgt actcggcgcg catgccttcg
     1741 gccacggcct cgagatagtc gtcctgcgtc ttgtagtact cattgggctg gaacagcgcg
     1801 atgacgccgg gggccgccga gttcatgaag ccattggcat agccgccggc cttcagggcg
     1861 gactggaagt tacggatgtc gtcgtgcagc ggctccaggg tcttgacggt gat
//
LOCUS       DATAZA010000529         2943 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_318927, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000529 DATAZA010000000
VERSION     DATAZA010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2943
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_318927"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            266..1417
                     /gene="mnmA"
                     /locus_tag="VHZ56_13105"
     CDS             266..1417
                     /gene="mnmA"
                     /locus_tag="VHZ56_13105"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004684096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEX4298952.1"
                     /translation="MDLNSLDLPKRAADTRVVVAMSGGVDSSVVAGLLARQGYDVVGV
                     TLQLYDHGEATHRKGACCAGQDIHDARRVAAALGIPHYVLDYEERFRDAVIEPFANAY
                     RQGETPVPCIACNQSVKFVDLMEVAQDLGADALATGHYVQSRLIDGRRRLYRPVDAGR
                     DQSYFLFATTQPQLDYLRFPLGGMTKPAVREVARELGLEIADKHDSQDICFVPQGNYA
                     DVIRKMHPEALADGDIVHLDGRVLGRHDGIVNYTVGQRKGLGIAAEAPLYVLKLDHRS
                     GRVVVGPREALMTRTVRLRDVNWLGEKPLAAAAGGNGLAVEVKVRSTRPPQQGAVQLL
                     DGAVFVTLFAGEFGISPGQACVFYADDGEQSEVLGGGFIAEAVPQALVA"
     gene            complement(1421..1606)
                     /locus_tag="VHZ56_13110"
     CDS             complement(1421..1606)
                     /locus_tag="VHZ56_13110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298953.1"
                     /translation="MSLVPDTSSNDRNTLAAARAVAAILCLLLAISVVLGVATGAINA
                     GTFLHPPDTQPGFITVP"
     gene            complement(1645..1821)
                     /locus_tag="VHZ56_13115"
     CDS             complement(1645..1821)
                     /locus_tag="VHZ56_13115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298954.1"
                     /translation="MPDQKPLGPFTMTPARVTILALGLLALVMIAGALLGGVGDFELL
                     REAAPSSQASSSAP"
     gene            2001..2552
                     /locus_tag="VHZ56_13120"
     CDS             2001..2552
                     /locus_tag="VHZ56_13120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX4298955.1"
                     /translation="MFTESPARPAPAGASSALIERAKAGDRLAFEQLIEQHYDFIFRT
                     ACKWTGKRSDGEDIAQEVCIKLATAIRSFDGRSKFTSWLYRVTLNMVRDMQRSRQRRD
                     RTVDAFTLVHPEDDPGGQEESTAANELWTAVSALPEKQREAIMLVYAEDMNHAEAATI
                     MGCKEATVSWHVHEAKKTLRGLL"
     gene            2552..>2943
                     /locus_tag="VHZ56_13125"
     CDS             2552..>2943
                     /locus_tag="VHZ56_13125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298956.1"
                     /translation="MTDDKMTDDALHALNRLQPAEPSPEARKLALNAAMAAFDAAQAQ
                     PKRKAGWTSRWRIGTGLGVPLGAALAALILIPAGTELYTATSHRMDAPPPSSARLPAG
                     APAKPGAGPTLQDHPVADVAATAPATTM"
BASE COUNT          514 a          949 c         1064 g          416 t
ORIGIN      
        1 cgtgggggag gccggacgga aggttacgtg cgacgtcagc ttcgcctcgg gggacggatt
       61 gatccaacag cagcgatgca agccgcgggc cagatcgaaa ggcctgtcgg gacaacgact
      121 tggcgttgcc ggcgcacatg ccgtgtcggc agcttctgcg ccgggcggca gattttgccg
      181 gggcgcggcc gggttgcagc caaacgcggg tgatcctata gagcggccgt tcactggggc
      241 cttgaccccc aactggatgg cttcgatgga tttgaattcg cttgatctcc ccaagcgcgc
      301 agcagacacg cgcgtcgtcg tcgcgatgtc gggcggcgtc gacagctcgg tggtcgcagg
      361 cctcctggcg cggcagggct acgacgtcgt tggggttacc ctgcagctgt acgaccatgg
      421 cgaggcgacg caccgcaagg gcgcgtgctg cgccggccag gacatccacg atgcccggcg
      481 ggtcgccgca gcgctcggca tcccgcacta cgtgctcgac tacgaggagc ggttccgcga
      541 cgcggtgatc gagccgttcg ccaatgccta ccgccagggc gagacgccgg tgccgtgcat
      601 cgcgtgcaac cagagcgtca agttcgtcga cctgatggag gtggcgcagg acctcggcgc
      661 cgatgcgctc gccaccggcc actacgtgca gagccggctg atcgatggcc gccggcggct
      721 gtaccggccg gtcgatgccg gccgcgacca gagctatttc ctgttcgcga cgacgcagcc
      781 gcaactcgac tatttgcgct ttccgctggg cgggatgacc aagccggcgg tgcgcgaggt
      841 ggcgcgcgag ctcggcctcg aaatcgccga caagcacgac agccaggaca tctgcttcgt
      901 gccgcagggg aactatgccg acgtgatccg gaagatgcat cccgaggcgc tggcggacgg
      961 cgacatcgtg catctcgacg gccgggtgct cggccggcat gacggcatcg tcaactacac
     1021 cgtcggccag cggaaggggc tcggcatcgc cgccgaggcg ccgctctatg tattgaagct
     1081 cgatcaccgg tccggccgcg tcgtcgtcgg gccgcgcgag gcgctgatga cgcggacggt
     1141 gcggctgcgc gacgtcaact ggctcggcga aaagccactg gcggcagcag ccggcggcaa
     1201 cgggctggcc gtcgaggtca aggtccgctc gacgcggccg ccgcagcagg gggcggtgca
     1261 gctgctcgat ggtgccgtgt tcgtcacgct gttcgcggga gagttcggga tctcgcccgg
     1321 gcaggcctgc gtgttctacg cggacgatgg cgagcaaagc gaagtgctgg gcggcggctt
     1381 catcgccgag gcggtgccgc aggcgctcgt cgcctgatcc tcaggggacg gtgatgaatc
     1441 cgggctgcgt gtccggcgga tgcaggaacg tgccggcatt gatggcgccg gtcgcgacgc
     1501 cgaggacgac cgagatggcc agcagcaggc agaggatcgc cgccacggcg cgggcggcgg
     1561 caagcgtgtt gcggtcgttg gacgaggtgt cgggcacgag gctcacctag tgccgccccg
     1621 ccggcgatgc aagcggctgc ggcgtcacgg tgcgctcgag gacgcctgcg acgagggggc
     1681 ggcctcgcgc agcagctcga aatcgccgac gccgccgagc agcgccccgg caatcatcac
     1741 cagagccagc aggccgagcg ccaggatggt gacgcgcgcg ggcgtcatgg tgaaggggcc
     1801 gagaggcttc tggtcgggca tgggctgacc tagcccggcg gccgggccgc ccgcaagggg
     1861 cgagggggcg acagaagcgc ccgaccgctg ctgaaaatat tcgcattccg gccccaagga
     1921 tgccggaggg cttggcgtct caggtacaag atgccaattc aagggcgccc agaatgaccg
     1981 gatccttggc tttgacggca atgttcacag agtctccggc ccggccggcc cccgcaggcg
     2041 cgagcagcgc cctgatcgaa cgggcaaagg cgggcgatcg gctggccttc gaacagctga
     2101 tcgagcagca ctacgatttc attttccgca ccgcctgcaa atggacgggc aagcggtcgg
     2161 atggcgaaga catcgcgcag gaagtctgca tcaagctcgc caccgccatc cgcagcttcg
     2221 acgggcggtc gaagttcacg agctggctgt accgggtgac gctcaacatg gtgcgcgaca
     2281 tgcagcgctc gcggcagcgc cgcgaccgca cggtcgacgc cttcaccctg gtgcatcccg
     2341 aggacgatcc gggcggacaa gaggagagca cagcggcgaa cgaactctgg acggcagtca
     2401 gcgccctgcc ggaaaaacag cgcgaagcga tcatgctcgt ctatgcggaa gacatgaacc
     2461 atgccgaggc cgcgacgatc atggggtgca aggaggcgac cgtctcctgg cacgtacacg
     2521 aagccaaaaa gaccctgagg ggacttttgt aatgaccgac gacaagatga cagacgacgc
     2581 cctccatgcc ctgaatcgcc tgcagcccgc cgagccctcg ccggaggcgc gcaagctcgc
     2641 gctcaatgcc gcgatggcgg cgttcgacgc ggcacaggcg cagccgaagc ggaaagccgg
     2701 ctggaccagc cgctggcgga tcgggaccgg acttggcgtg ccactcgggg cagcgctggc
     2761 ggcgctgatc ctgatcccgg ctggaacgga actctatacg gcgacctcgc accggatgga
     2821 tgcaccgccg ccaagctcgg ctcggttgcc ggcaggggcg ccggccaagc cgggtgctgg
     2881 cccgacgttg caggaccatc ccgtcgcgga cgtcgcggcc actgcaccag caacgacgat
     2941 gga
//
LOCUS       DATAZA010000530         3052 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2988762, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000530 DATAZA010000000
VERSION     DATAZA010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3052
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2988762"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            354..860
                     /locus_tag="VHZ56_13130"
     CDS             354..860
                     /locus_tag="VHZ56_13130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX4298957.1"
                     /translation="MSASVERAGASSQTEAGKRSRRSWSREEKRRIVEEAFRPGASVA
                     DVARRHGLNANQVFNWRKATPGETASPEVGLPAAIPPRVASAVDFVPIGMFARAEDEG
                     PALIAGGLPAGVSPAPSGGAALRPPAMNERPGVIEIDLADGTRLRVDAFVNERALRRV
                     LAVLKATS"
     gene            857..1210
                     /gene="tnpB"
                     /locus_tag="VHZ56_13135"
     CDS             857..1210
                     /gene="tnpB"
                     /locus_tag="VHZ56_13135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009465831.1"
                     /note="TnpB, as the term is used for proteins encoded by
                     IS66 family insertion elements, is considered an accessory
                     protein, since TnpC, encoded by a neighboring gene, is a
                     DDE family transposase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HEX4298958.1"
                     /translation="MIQVAPGTKVYLACRPVSMRYGFDGLAAQVARVLDADPFSGHLF
                     VFRGKRADYLKILYWDGTGLCLFAKRLENGRFVWPPIVDGAMVLTPAQLALLLEAIDW
                     RRTVAPEPPRRPMTV"
     gene            1263..2864
                     /locus_tag="VHZ56_13140"
     CDS             1263..2864
                     /locus_tag="VHZ56_13140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016922178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HEX4298959.1"
                     /translation="MSLANDPLPADPDALRRFAASLQAELARKEIEIAANAAEIHAKT
                     LHIEKLKAQLAVLRRARFGRSSEKLDRDIEQLELLIGDLEKETAESEARAANPAATAD
                     RGNPVKPRERRQPARAPLPAHLPRETVTHAAACVCPGCGGTVFSRIGQDEREVLEYVP
                     SSFRVIRHVRPKLSCRTCETIVQALMPSLPIERGRPGPGLIAHVLVAKFCDHTPLHRQ
                     SVIYAREGVELDRTTLADWVGQAVFLLAPLAEAIGRHVRAGGVLHADDTTVPVLAPGL
                     GKTRTGRLWVAVRDERPWGSAVPPAAFYRYSPDRKAIHAEALLGTCRGFLHADGYAGF
                     EQLYRPRTPGGEAPLIEVACWSHVRRKFYDVHHAAASPIALEAMQLIAALFAIESDIR
                     GQPPEHRVAARQQQACPLLDRLKAFLETALGRISGKSTLAQAIRYALSRWAALERYLA
                     DGRLDMSNNAAERAMRPPVLGRKNYLFCGSDAGGKRAACIYTLTETCKMNGINPQAYL
                     TDVLGRIADHPINKIDVLLPWRWKQ"
BASE COUNT          494 a         1021 c         1023 g          514 t
ORIGIN      
        1 atccacaccg ctctgaatga gcatggtcag gttgtggccc tctctgcgcc atactggctc
       61 cgcttgcggc ttatgaggta gggaggtgag agcaaagccc gagtaggtga agccgagctt
      121 gtcggcttct tcgctcatca cttggtaagc tgcctctacg agagcccgtt catgttttgt
      181 cgccgcctgt cggcgggctt cttcgacgcc ttgctttacg gtaagcgcca gccgacggcc
      241 gcctgtcggc ttcaaagcgt ttgcggcaac gtcgtttcgg cctgaggggc tcgggctcat
      301 gtccactaat cggctgatgg acactatggc tgcagacacg aaggtcggag tcattgagcg
      361 cctctgtcga gcgagcgggt gcatcatcgc agacggaagc tggcaagcgg tcgcggcggt
      421 cgtggtcgcg tgaagagaag cggcggattg tcgaggaggc gtttcgtccc ggggcgtctg
      481 tggcggatgt cgcgaggcgg cacgggctga acgccaatca ggtgttcaac tggcggaagg
      541 cgacaccggg agagacggca tcgccggagg ttggtttgcc ggccgcgata ccaccccggg
      601 tggcgagtgc cgtcgacttc gtgccgatcg gcatgtttgc gcgcgcggag gatgagggcc
      661 ctgcgttgat cgccggcggt ttgccggccg gcgtttctcc ggcgccgtcc ggtggtgcgg
      721 cgctacggcc gccggcgatg aatgagcggc cgggagtgat cgagatcgat ctggccgacg
      781 gcacccggct gcgggtggac gccttcgtca acgaacgcgc gctgcggcgc gtgttggcgg
      841 tgttgaaggc gacgtcgtga tccaggtcgc acccggcacc aaggtctatc tggcctgccg
      901 tccggtcagc atgcgctacg ggttcgacgg gctggcggca caggtcgccc gggtgctgga
      961 tgccgatccg ttcagcgggc acctgttcgt gttccgcggc aagcgcgccg actacctgaa
     1021 aattctgtat tgggacggca ccggcctgtg cctgttcgcc aagcggctgg agaatggccg
     1081 gttcgtctgg ccgccgatcg tcgatggcgc gatggtgctg acgccggcgc aactggcgct
     1141 gctgctcgag gcgatcgact ggaggcggac ggtagcgccg gagccgccgc gccggccgat
     1201 gacggtctga ccgcgagcgg acccctcttg tacggcgacg gccggacttg gtacattcgg
     1261 ccatgtcctt ggcgaacgac cctctgccgg ccgacccgga cgcgctgcgg cggttcgccg
     1321 ccagcctgca agccgagctg gcccgcaagg agatcgagat cgcggccaat gccgccgaga
     1381 tccatgccaa gaccctgcat atcgagaagc tcaaggcgca actggcggtg ctgcgccgtg
     1441 cccgcttcgg ccggtcctcg gagaagctcg atcgcgatat cgagcagctc gagctgctga
     1501 tcggcgacct cgagaaggag acggccgaga gcgaggcccg cgccgccaat cccgccgcca
     1561 cggccgatcg cggcaacccg gtcaagccgc gcgagcgccg ccagccggcc cgcgcgccgc
     1621 tgccggcgca tctgccgcgc gagaccgtca cgcatgcggc ggcctgcgtt tgcccgggct
     1681 gcggcggcac cgtgttcagc cggatcgggc aggacgagcg cgaagtgctg gaatacgtcc
     1741 cgtccagctt cagagtgatc cgccatgtcc gtccgaagct gagctgccgg acgtgcgaga
     1801 cgatcgtgca ggcgctgatg ccatcgctgc caatcgagcg cggacggccc ggacccggcc
     1861 tgatcgcgca cgtcctggtc gccaagtttt gcgatcatac cccgctgcat cggcagagcg
     1921 tcatctatgc gcgcgagggc gtcgagctcg atcgcacgac cctcgccgat tgggtcggcc
     1981 aggcggtgtt cctgctcgcg ccgttggccg aagcgatcgg ccgccatgtc cgcgccggcg
     2041 gcgttctgca cgccgacgat accactgtgc cggtgctcgc gcccggcctc gggaaaacca
     2101 ggaccggacg gctttgggtg gcggtgcgcg atgagcgccc atggggctcg gccgtgccgc
     2161 cggctgcgtt ctatcgctac tcgcccgacc gcaaggcgat ccatgccgaa gcattgctcg
     2221 gcacctgccg tggattccta catgccgatg gctatgccgg gttcgagcag ctctatcgac
     2281 cgaggacgcc cggcggcgag gcgcccttga tcgaagtcgc gtgctggagc catgtgcggc
     2341 gcaaattcta cgacgtgcat cacgctgccg cctcgccgat cgcgctcgag gcgatgcagc
     2401 ttatcgcagc cctgttcgcc atcgagagcg acatccgggg ccagccgccc gagcaccgcg
     2461 tcgccgcgcg acagcaacag gcgtgtccgc tgctcgatcg cctgaaggcc ttcctcgaga
     2521 cggcactcgg ccggatcagc ggcaaaagca cgctcgccca agccatccgc tacgcgctgt
     2581 cgcgatgggc tgcgctcgaa cgctatctcg ccgacggccg gctcgacatg tccaacaacg
     2641 ccgccgaacg cgccatgcgg cccccggtgc tgggcagaaa gaactacctc ttctgcggct
     2701 ccgacgccgg cggcaaacgc gccgcctgca tctacaccct caccgaaacc tgcaagatga
     2761 acggcatcaa tccgcaggcc tatctcaccg acgttctcgg gcgcatcgct gatcatccca
     2821 tcaacaagat cgatgtcctg ctcccttggc gatggaaaca atagccaacg ctaagctcag
     2881 accccgacac caaaatccgc ggcccacagc ccacgcttac agtccggtcg agggccaggt
     2941 cagccgtctc aagatgctga aacgcaccat gtatggccgc gccagcttcc gtctgctcag
     3001 cgcgcgagtg ctccatgcag aacgatgacg tcacctccac cacatttgcg gg
//
LOCUS       DATAZA010000531         1744 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2410121, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000531 DATAZA010000000
VERSION     DATAZA010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1744
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2410121"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1744
                     /locus_tag="VHZ56_13145"
     CDS             <1..>1744
                     /locus_tag="VHZ56_13145"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEX4298960.1"
                     /translation="AGNVSDWLAHRLSATERGDALSELAAADEPDALVLAIGAGLEPD
                     AINSAGTDALISAIAADSSRSVETLLRAGASPTLPTRFGPPGQFAASVGSAEIVALFA
                     RSGALDIGTRLLQAAQDDDVATLAPLLRAGASPDSQGPGQLTPLMAAVLAGAHNAVAA
                     LLAAGAQTELVDAHGLTALAMAVMADDPGSVNALLAAHADPAAKISGTPILSLAVPTG
                     DAALVTSLLQVGADPATTDSRGNRPAALAVSLGQPALATLLGGAPELLHRPNLLALLR
                     QGADIAKVKAALDAGAATDTTDASGWTPLLWAAGNSSAAIVGALIDARADMLAKGPNG
                     TTLIEAALANPAKPERDAMLQAMVAKLGPGDFAGLATTADAAGRTGIVALANSPDINI
                     DVWKAILAGASPALVDHADADGVTPTIAAVLSGNYAYLEAETQSSFATATAADAWHGT
                     SLQDLARGRGLWAVLAYLPDDRAPPPGLVKGAGKDVKAQLQQQLQQWGYYSGKIDGAF
                     GPTGRAALVAMLKDRAAELEKIAIAIQTFGLNPPGFLWNHFADAKLNETTDFIAFGGP
                     SAGCKWQENRWRQRP"
BASE COUNT          257 a          683 c          574 g          230 t
ORIGIN      
        1 cgccggcaac gtctccgact ggctggcaca ccggctgtcg gcgaccgagc gcggcgacgc
       61 cctgagcgag ctcgcagctg ccgacgagcc cgatgcactg gtcctggcga tcggcgccgg
      121 gctggagccg gacgccatca attcggctgg caccgatgcg ctgatttcgg ccatcgccgc
      181 cgacagctcc cgcagcgtcg agaccctgtt gcgggccggc gccagcccga ccctgccgac
      241 ccgcttcggc ccgcccggcc agtttgccgc gagcgtcggg tcggccgaga tcgtcgccct
      301 gtttgcgcga agtggcgcgc tcgatatcgg cacccggctg ctgcaggccg cgcaggacga
      361 cgacgtcgct acgctcgcgc cgctgctccg cgccggcgcc tcgcccgata gccagggtcc
      421 gggacagctg acgccgctga tggcggcggt gctcgccggc gcgcacaacg ccgtggccgc
      481 cctgctcgcc gccggagccc agaccgagct ggtcgacgcc catggcctta ccgctcttgc
      541 catggcggtg atggccgacg accccggctc ggtgaacgcg ctgctcgccg cgcacgccga
      601 ccccgccgca aaaatctctg gaacgccgat cctgtcgctc gccgtgccca ccggcgatgc
      661 cgccctggtg accagcctgc tgcaggtcgg agccgacccc gcaacgaccg acagtcgcgg
      721 caaccggccg gccgcgctgg cggtctcgct gggccagccc gccctcgcca cgctgcttgg
      781 cggcgccccg gaactgctcc accgcccgaa cctcctcgcg ctgctgcgcc agggtgccga
      841 catcgcgaag gtaaaggctg cgctcgatgc cggcgccgca accgacacca ccgacgcctc
      901 cggctggacg cccctgctct gggccgccgg caattcgtcg gccgccatcg tcggagcgct
      961 catcgacgcc agggcggaca tgctggccaa ggggccgaac ggcacgaccc tgatcgaggc
     1021 ggcgctcgcc aatccggcca agccagagcg cgacgccatg ttgcaggcca tggtcgccaa
     1081 actgggtccc ggcgattttg ccggcctcgc gaccacggcc gacgccgccg gccgcaccgg
     1141 catcgtggcg ctggccaatt cgccggacat caacatcgat gtgtggaagg ccattctggc
     1201 cggcgccagc ccggcacttg tcgatcacgc cgacgccgac ggcgtcaccc cgaccatcgc
     1261 cgcggtgctg tcgggcaact acgcctacct tgaggccgag actcaatcga gctttgccac
     1321 ggccaccgcc gcggacgcct ggcatggcac cagcctgcag gatctggcgc gcggccgcgg
     1381 cctctgggcc gtgctggcct acctgccgga cgaccgggct ccgccgcccg gcctggtcaa
     1441 gggcgccggc aaggacgtca aggcgcagtt gcagcagcag ctccagcaat ggggctacta
     1501 cagcggcaag atcgacggcg ccttcggccc gacgggacgc gccgcgctgg tggcgatgct
     1561 gaaggaccgc gccgccgagc tcgagaaaat cgccatcgcc atacagacct tcggcctcaa
     1621 cccgccgggc ttcctctgga accattttgc cgacgccaag ctcaacgaga ccaccgactt
     1681 catcgccttc ggcggcccct cggccggatg caaatggcag gagaaccgct ggcgccagcg
     1741 cccc
//
LOCUS       DATAZA010000532         6917 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2989487, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000532 DATAZA010000000
VERSION     DATAZA010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6917
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2989487"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            86..949
                     /locus_tag="VHZ56_13150"
     CDS             86..949
                     /locus_tag="VHZ56_13150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX4298961.1"
                     /translation="MTLIETSCRTRDGDIKATESTGAGLPLVLLHGSGSARGVFARLL
                     RGPLADQYRMIALDLPGHGESANAARPEETYTLPGLADSVSEALDRMGVGRCAIFGWS
                     LGGHIALEMLSFRPGIAGIMLTGAPPIGHGPVGVLRAFRVSFDSMLASKPRFSDHDIE
                     RFARMCLGDAATLADRRFIARADGRLRKIMFNSMMRGQCADEKSLVEQSAVPIAIVNG
                     SEEPVARLGYVARLRYRNLWDGICHIVPDAGHAPFVQAPAAFDALLARFAGEMAAART
                     GVAVPELQRSA"
     gene            complement(956..1525)
                     /gene="efp"
                     /locus_tag="VHZ56_13155"
     CDS             complement(956..1525)
                     /gene="efp"
                     /locus_tag="VHZ56_13155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010968469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEX4298962.1"
                     /translation="MVKVIASSLRKGQVVEQENKLYVVLTAENIHPGKGASVTQVDMR
                     RISDGVKVSERWRTTEMVEKADVDEREYQFLYSDGEGFHFMEPTTYEQIAVPEDIVGQ
                     QKAFLQDGMKVFMKTFEGNALSLELPARVTLEIVETEPVVKGQTASSSFKTAVLSNGV
                     KTTVPPHIGVGTRVVVMTEDASYVERAKD"
     gene            1666..2727
                     /gene="epmA"
                     /locus_tag="VHZ56_13160"
     CDS             1666..2727
                     /gene="epmA"
                     /locus_tag="VHZ56_13160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P lysine aminoacylase EpmA"
                     /protein_id="HEX4298963.1"
                     /translation="MPSKPPSPPPSPWWTPAAHADRRPVLLLRNRIEAAIRGYLAAED
                     FVMVDPPGLQRSPGNEAHLHAFATTAIGNDGAGAVRYLHTSPEFTMKKLLAAGEQRIA
                     SLGHVWRNRERSATHHPEFTMLEWYRAGEPYTAVMNDCTAMLRIAAQTAATPLLRFRE
                     RTCDPFAEPERLSVAEAFSRHAGIDLLATIGADGGGDASALAAQMRAAGLRVPAEFTW
                     SFLFTLILVEKVEAQLGLGRATILDRYPAAEAALARRSADDPRVAERFEVYACGVELA
                     NGFGELTDAREQRRRLALEMDEKQRLYGERYPLDEAFLEALATMPEASGIALGFDRLV
                     MLAAGASRIEQVLWAPVVE"
     gene            complement(2737..5406)
                     /locus_tag="VHZ56_13165"
     CDS             complement(2737..5406)
                     /locus_tag="VHZ56_13165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX4298964.1"
                     /translation="MQTAFLRRRLAAMFRPTNLVGSMALVVVLASVVFADAQNRALEE
                     QQVRTDVARQVGVLRARLEGNIDGDMQLVRGLIATLVTEPNMDEARFSALAKGLFEQK
                     SQLRDIAGAPNLKVTLLYPVPGNEKTMGLDYSKSDTQKAAAFRARDSHALVLAGPLDL
                     VQGGNGFVGRFPVFIPAPLGGETFWGVVSAVVDSQRLYADSGLLDADLGLDITIRGRD
                     GTGAAGGTFFGDPAVLADQPVVVDVDLPTGMWQVAARPAGGWVAALPSPVGFRLALAI
                     AAALVLIPLFVAWRLVNERARHIRTLREREHQLDVLSRRFGLALDTSEVGVWEFNIDT
                     QQTLWDARMSALYGVPPAVGWRADDHWQHAVHPDDIDRVQAQISDAIDTRGRYVAEYR
                     IRRPDGEERVVRAIATCYQEADGSFRLVGLNWDVTADVAIKHELERARAEAEARNAEL
                     VVATERIEHTSLHDALTGLPNRRYLDRALGERAAATPAGDGIALLHIDLDRFKQINDT
                     LGHAAGDAMLVHAADVLRANVRDGDFVARIGGDEFVVLSALRNGRRDLARLAQRIIDQ
                     MRQPVPYMGRECRCGVSVGIAYQRAPAIDDKRLLIDADIALYRAKRHGRNRHEFFTAA
                     LQAEIVSTKQMADDILEGIDKGQFVAWYQPQFDARTLKLSGVEALARWQHPTRGVVPP
                     DIFMSIAEDLNVVATIDRMILEQTLAWMDVWKAQGLVVPRASVNVSARRLRDENLVKS
                     LRKLDIRPGTISFELVESIYLDERDDIVDWNIDQIRELGIDIEVDDFGTGYASIVSLL
                     QLRPRRLKIDRQLVMPVVEAETQRQLIGSIVDIGHSLGISVVAEGVETDEHMRIVTSL
                     GCDTLQGYAFARPLSPADLERFIIKRQARTAAA"
     gene            5719..>6917
                     /gene="uxaC"
                     /locus_tag="VHZ56_13170"
     CDS             5719..>6917
                     /gene="uxaC"
                     /locus_tag="VHZ56_13170"
                     /EC_number="5.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013850660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008880 - glucuronate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006064 - glucuronate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronate isomerase"
                     /protein_id="HEX4298965.1"
                     /translation="MAGKPMLNDDRLFPADPTTRGIARELFSAVRRLPLVSPHGHTEP
                     RWYAEDAPFPDPAQLLIVPDHYVTRMLVSQGLTLGELGVPRSDGGPVETDGRTIWRRF
                     ATNYRLFRGTPTRLWLDTTFETLFGIDEPLTADSADRCYDRIADCLGRPEFRPRALFE
                     RFGLEVIATTDSATDDLRWHEMLRESGWRGRVVPTYRPDGVVDPDRPGFAAGLERLGE
                     LTGCDTGSWAGYLEAHRVRRGFFKSMGATASDHGHPSALTADLPAGEAATLFGRVRRG
                     EADAGQRELFRAQMLTEMAAMSRDDGLVLQIHPGSWRDHSPAMAAAHGPNTGFDIPRR
                     TDYVAALKPLLDRFGMDKSLRIILFTLDETTYARELAPLAGVYPALRLGPPWWFFDSP
                     EGMLRFR"
BASE COUNT         1009 a         2237 c         2594 g         1077 t
ORIGIN      
        1 tgcatttatt caccaccggt ctagacgcgc cggttacgtg tttgcggcag gatgcacacc
       61 ggaggcccga gaaggttacc ggaagatgac cctgatcgag acgagctgca gaacgcgcga
      121 tggcgacatc aaggcgacgg agtcgaccgg cgccggcctg ccgctcgtgc tcctgcacgg
      181 ttcgggcagc gcccgcggcg tgttcgcgcg gctgctgcgc gggccgctgg ccgaccaata
      241 ccggatgatc gcgctcgacc tgccggggca tggcgagtcc gcgaacgcgg cgcggccgga
      301 agagacctac acgctgccgg ggctggcgga cagcgtcagc gaggcgctcg accggatggg
      361 cgtcgggcgc tgcgccatct tcggctggtc gctgggcggc catatcgcgc tcgagatgct
      421 gagcttccgg ccggggatcg cggggatcat gctgaccggc gcgccgccga tcgggcatgg
      481 cccggtgggc gtgctgcggg ccttccgggt gagcttcgat tcaatgctgg cctcgaagcc
      541 gcggttcagc gaccacgaca tcgagcgctt tgcacggatg tgcctcggcg acgccgcgac
      601 gctggccgac cggcgcttca tcgcgcgggc cgacggacgg ctgcgcaaga tcatgttcaa
      661 ctcgatgatg cgcggacagt gcgccgacga gaagtcgctg gtggagcagt cggcggtgcc
      721 catcgccatc gtcaacggct cggaggagcc ggtggcgcgg ctcggctacg tggcgcggct
      781 gcgctaccgc aatttgtggg acggcatctg ccacatcgtc ccggatgccg ggcacgcgcc
      841 gttcgtgcag gcgccggcgg cgttcgatgc gctgctggcg cggttcgccg gcgagatggc
      901 cgcggcgcgc accggcgttg ccgtgccgga attgcagcgc agcgcctgac ggcgatcagt
      961 ccttggcgcg ctcgacgtaa gaggcgtcct cggtcatcac cacgacgcgg gtgccgacgc
     1021 cgatgtgcgg cggcacggtg gtcttgacac cgttcgacag caccgccgtc ttgaacgaag
     1081 acgaggcggt ctggcccttc accaccggtt cggtctcgac gatctcgagg gtgacccggg
     1141 ccggcagttc gagtgacagg gcgttgccct cgaaggtctt catgaacacc ttcatgccgt
     1201 cctggaggaa ggccttctgc tggccgacga tgtcctcggg cacggcgatc tgctcgtagg
     1261 tggtgggttc catgaagtgg aagccctcgc cgtccgaata gaggaactgg tactcgcgct
     1321 cgtcgacgtc ggccttctcg accatctcgg tggtgcgcca gcgctcggac accttcacgc
     1381 catcgctgat gcggcgcatg tcgacctggg tcaccgaggc gcccttgccg gggtggatgt
     1441 tctcggccgt cagcacgacg tagagcttgt tctcctgctc cacgacctgc cccttgcgga
     1501 gcgacgaggc gatgaccttg accatacttt cttccttgtc cgggcgccgg agcgggctta
     1561 gagcggcaag ccggccgctc cgggcgcgag aaatgctgtt gttcggcgcc gccgatagcg
     1621 caaatccggc aaatccgcca gtcccgtacg cgaaagagcc tgcccgtgcc gagcaaaccg
     1681 ccctcgccgc ccccgtctcc gtggtggaca ccggccgcgc atgccgaccg gcggccggtg
     1741 ctgctgctgc gcaaccgcat cgaggcggcg atccgcggct atctggcagc cgaggatttc
     1801 gtgatggtcg atccgcccgg cctgcagcgc tcgccgggca acgaggcgca cctgcatgcg
     1861 ttcgcgacca ccgccatcgg caatgacggc gccggcgcgg tgcggtacct ccacacctcg
     1921 cccgaattca ccatgaagaa gctgctggcg gcgggcgagc agcgcatcgc cagcctgggg
     1981 catgtgtggc gcaaccgcga gcgctcggcg acgcaccatc cggagttcac catgctcgaa
     2041 tggtaccggg cgggggagcc gtacacggcg gtgatgaacg actgcacggc gatgctgcgg
     2101 atcgcggcgc agacggcggc gacgccactg ctgcggttcc gcgagaggac ctgcgatccg
     2161 tttgccgagc cggagcggct gagcgtcgcc gaggcgttca gccgccatgc cgggatcgac
     2221 ctgctggcga ccatcggggc ggacggaggg ggcgatgcga gcgcgctggc ggcgcagatg
     2281 cgggcggccg gactgcgggt gccggcggag ttcacctggt cgttcctgtt cacgctgatc
     2341 ctcgtcgaga aggtcgaggc gcagctgggg ctgggacggg ccacgatcct cgaccgctat
     2401 ccggcggccg aggcggcact ggcgcggcgc agcgccgacg atccccgggt ggccgagcgg
     2461 ttcgaggttt atgcctgcgg tgtcgagctc gccaatggtt tcggcgagct caccgacgcc
     2521 cgcgagcaac ggcggcggct ggcgctggag atggacgaga agcagcggct ctatggcgag
     2581 cgctacccgc tcgacgaggc cttcctcgag gcgctggcga cgatgcccga ggcgagcggc
     2641 atcgccctcg gcttcgaccg gctggtgatg ctggcggcgg gggccagccg gatcgagcag
     2701 gtgctgtggg cgccggtggt agaatagggt tccggatcag gcggcggcgg ttcgggcctg
     2761 gcgcttgatg atgaagcgct cgaggtcggc ggggctgagc ggccgggcga aggcatagcc
     2821 ctgcagcgtg tcgcaaccga gggaggtgac gatgcgcatg tgctcgtcgg tctcgacgcc
     2881 ctcggcgacc accgaaatgc cgagcgagtg gccgatgtcg acgatcgagc cgatgagctg
     2941 gcgctgggtc tcggcctcga ccaccggcat caccagctgg cggtcgatct tgagccggcg
     3001 cggcctgagc tgcagcaggc tgacgatcga ggcgtagccg gtgccgaaat cgtcgacctc
     3061 gatgtcgatg ccgagctcgc ggatctggtc gatattccag tcgacgatgt cgtcgcgttc
     3121 atcgagatag atcgattcca ccagctcgaa cgagatggtt cccgggcgga tgtcgagctt
     3181 gcgcaggctc ttgaccaggt tctcgtcgcg cagccggcgg gccgagacat tgaccgaagc
     3241 gcgcggcacc accaggccct gggccttcca cacatccatc caggccagcg tctgctcgag
     3301 gatcatgcgg tcgatggtgg cgacgacgtt gaggtcctcg gcgatggaca tgaagatgtc
     3361 gggcgggacg acgccgcgcg tcgggtgctg ccagcgtgcc agcgcctcga cgcccgagag
     3421 cttgagggtg cgggcgtcga actgcggctg gtaccaggcg acgaactggc ccttgtcgat
     3481 gccctcgagg atgtcgtcgg ccatctgctt ggtcgagacg atctcggcct gcagcgccgc
     3541 ggtgaagaat tcgtggcgat tgcggccgtg gcgcttggcg cgatagagcg cgatgtcggc
     3601 atcgatcagc aaccgcttgt cgtcgatggc gggcgcccgc tggtaggcga taccgacgga
     3661 gacgccgcag cggcattcgc gacccatata ggggaccggc tggcgcatct ggtcgatgat
     3721 gcgctgggcg aggcgggcga ggtcgcggcg gccgttgcgc aaggcgctca gcacgacgaa
     3781 ctcgtcgccg ccgatgcggg cgacgaaatc gccgtcgcgg acattggcgc gcagcacgtc
     3841 ggcggcgtgc accagcatgg cgtcgccggc ggcgtggccg agcgtgtcgt tgatctgctt
     3901 gaagcggtcg agatcgatgt gcagcagggc gatgccgtcg ccggcggggg tggcggcggc
     3961 gcgttcgccg agcgcccggt cgaggtagcg gcggttgggc agcccggtca gcgcgtcgtg
     4021 cagcgaggtg tgctcgatac gctcggtggc gacgaccagc tcggcgttgc gggcctcggc
     4081 ctcggcccgg gcgcgctcga gctcgtgctt gatggcgaca tcggcggtga cgtcccagtt
     4141 gaggccgacg agacggaagc tgccatcggc ctcctggtag caggtggcga tggcgcggac
     4201 gacgcgctcc tcgccgtcgg ggcggcggat gcggtattcg gcgacgtagc ggccgcgggt
     4261 gtcgatggcg tcgctgatct gggcctggac gcgatcgatg tcgtcggggt gcacggcgtg
     4321 ttgccagtgg tcgtcggcac gccagccgac cgcaggcggc acgccgtaga gggcgctcat
     4381 gcgcgcatcc cagagcgtct gctgcgtgtc gatgttgaat tcccagacgc cgacctcgga
     4441 ggtgtcgagg gcgaggccga accggcgcga cagcacgtcg agctgatgct cgcgctcgcg
     4501 cagggtgcgg atgtggcggg cgcgctcgtt gacgaggcgc caggcgacga agagcgggat
     4561 gagcaccagc gccgccgcga tggccagtgc cagccggaag ccgacgggac tgggcagcgc
     4621 cgcgacccag ccgcctgccg ggcgggcggc gacctgccac atgccggtcg gcaggtcgac
     4681 gtcgacgacg accggctggt cggcgaggac ggcgggatcg ccgaagaagg tgccgccggc
     4741 ggcaccggtg ccgtcgcggc cccggatggt gatgtcgagg ccgaggtcgg cgtcaaggag
     4801 accgctgtcg gcatagaggc gctggctgtc gaccacggcc gagacgacgc cccagaatgt
     4861 ttcacccccc agaggggccg ggatgaacac cgggaagcgg ccgacgaagc cgttgccgcc
     4921 ctgcacgagg tcgagcggtc cggcgaggac cagcgcgtgg ctgtcgcggg cgcggaacgc
     4981 ggcggccttc tgcgtgtcgg atttgctgta gtcgagcccc atggtctttt cgttgcccgg
     5041 gacgggatag agcagggtca ccttgaggtt gggggcgccg gcgatgtcgc ggagctgcga
     5101 cttctgctcg aacaggccct tggccagcgc cgaaaaccgc gcctcgtcca tgttcggctc
     5161 ggtgacgagg gtggcgatca ggccgcgcac cagctgcatg tcgccgtcga tgttgccctc
     5221 gaggcgggcg cggagcacgc cgacctgccg ggcgacatcg gtgcgcacct gctgctcctc
     5281 gagcgcgcgg ttctgggcgt cggcgaagac caccgaggcg aggaccacga cgagcgccat
     5341 gctgccgacc agattggtcg ggcggaacat ggcggcaagc ctgcggcgga ggaaagcggt
     5401 ctgcatgtcg aaagtcggtc ccaaaactcc ggtcgcccgg gatggcggcc aaatctgggg
     5461 tgtcgcggct taagttttgg cttcgctgcc gcggtggcgg cggcattgcg gcgggcatgg
     5521 ttgagccggg gttaagaaaa ttcccgcgag cgggcgcaac cggcgcatgg ccggcacgtt
     5581 agcttcccgt ctccggacga ttgttgaccc tgtgcgctgc cctgccctcc cccgaggcgg
     5641 ggcagcgttt tttccggatc ggcggggtcg tgccttgacc ctccggcccg gaggcggcta
     5701 ggtcggcgca ttcatttcat ggcgggcaaa ccgatgctca acgacgaccg cctgttcccg
     5761 gccgacccca ccacccgcgg catcgcccgc gagctcttca gcgcggtccg gcggttgccg
     5821 ctggtcagcc cgcatggcca caccgagccg cgctggtacg cggaggatgc gccgttcccc
     5881 gatccggcgc agttgctgat cgtgcccgac cattacgtga cacggatgct ggtgagccag
     5941 ggcctgacgc tcggcgagct gggcgtgccg cggagcgacg gcgggccggt ggagaccgac
     6001 gggcggacga tctggcggcg ttttgcgacg aactaccggc tgttccgcgg tacgccgacc
     6061 cggctctggc tcgataccac cttcgagacg ctgttcggga tcgatgagcc gctcaccgcc
     6121 gacagcgccg accgctgcta cgaccgcatc gccgactgcc tcgggcggcc ggagttccgg
     6181 ccgcgggcac tgttcgagag attcgggctc gaggtcatcg ccaccaccga cagcgcgacg
     6241 gacgatttgc gctggcacga aatgctgcgc gagtccggct ggcgcgggcg ggtggtgccg
     6301 acctaccggc cggacggggt ggtcgatccc gaccggcccg ggtttgccgc cgggctcgag
     6361 cggctgggcg agctgaccgg ctgcgacacc ggcagctggg ccggctacct cgaggcgcac
     6421 cgcgtgcggc ggggcttttt caagtcgatg ggcgcgaccg ccagcgacca cgggcatccg
     6481 agcgcgctga cggccgacct gccggcgggc gaggcggcga cgctgttcgg ccgggtgcgc
     6541 cggggcgagg cagacgccgg gcagcgcgag ctgttccggg cgcagatgct gaccgaaatg
     6601 gcggcgatga gccgggacga cgggctggtg ctgcagatcc atccgggatc gtggcgcgac
     6661 cattcgccgg cgatggcggc ggcacacggg ccgaacaccg gcttcgacat cccgcgccgc
     6721 accgactacg tggcggcgct gaagccgctg ctcgaccgct tcggcatgga caagagcctc
     6781 aggatcatcc tgttcaccct cgacgagacc acctatgcgc gcgagctggc gccgctcgcg
     6841 ggagtttatc cggcgctgcg gctcgggccg ccatggtggt tcttcgacag cccggagggc
     6901 atgctgcgct tccgcga
//
LOCUS       DATAZA010000533         1821 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2294164, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000533 DATAZA010000000
VERSION     DATAZA010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2294164"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            312..>1821
                     /gene="ettA"
                     /locus_tag="VHZ56_13175"
     CDS             312..>1821
                     /gene="ettA"
                     /locus_tag="VHZ56_13175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015856653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HEX4298966.1"
                     /translation="MARQFVYHMHGMSKAYAGGKKVLDTVHLSFYPDAKIGVLGPNGS
                     GKSTLLRIMAGIDTEFTGEAWVAEGARVGYLPQEPQLDEALDVLGNVMTGVKEKKDIV
                     DRYNELMMNYSDDTADEATRLQDVIDSQNLWDLEAQVGVAMEALGCPPADSSVDTLSG
                     GEKRRVALCALLLSKPDLLLLDEPTNHLDAETTAWLEKHLREFPGAVLIITHDRYFLD
                     NVTGWILELDRGKGVPYEGNYSAYLDSKTKRFAQEEREDAARLKVLNKEREWMGQSPQ
                     ARQAKSKARVKAYDELVKLNDARTLSNTAQIIIPPGERLGQNVIDIEGVSKSYGDRLL
                     IDNLTFKLPPGGIVGVIGPNGVGKTTLFRMITGQDKPDAGEIVIADAVHLGYVDQSRD
                     TLNANKTVWEEISGGSEILMLGKREMNSRAYTGAFNFKGADQQQKVGNLSGGQRNRVH
                     LAKMLKSGANVLLLDEPTNDLDTETLAALEEALEEFAGCAVIISHDRMFLDRL"
BASE COUNT          356 a          600 c          584 g          281 t
ORIGIN      
        1 gaggatcacc tcgcggccgc tgccgtcggc attgatgagg gtcagttcgg agtgctggcc
       61 gggcagcagt tcgcggccct tgcgggtgaa caatgatggc atccggcgct cccttgcggc
      121 gcggtggagg tccgcgcttc cccatctgta ttaacgataa ttctgggcca tggctagagg
      181 ctgggcggcg agcgtcgcaa ggcccgcggc cagcatcagg atgcgcgtca taaggtcctc
      241 cggcttctgt tgccccggcg tgggggttgc cctacatacg gcgctcgctt tcagcccggg
      301 tcgagaccgt catggcgcgc cagttcgtct atcacatgca tggaatgtcc aaggcctatg
      361 ccggcggcaa gaaggtgttg gacactgtcc atctcagctt ctacccggac gccaagatcg
      421 gcgtgctcgg gccgaacggc tcgggcaagt cgacgctgct gcggatcatg gccggcatcg
      481 acaccgagtt caccggcgag gcgtgggtgg cggagggcgc cagggtcggc tacctgccgc
      541 aggagccgca gctcgacgag gcgctcgacg tgctcggcaa cgtgatgacc ggggtcaagg
      601 aaaaaaagga catcgtcgat cgctacaacg agctgatgat gaactattcc gacgacaccg
      661 ccgacgaggc gaccaggctc caggacgtca tcgacagcca gaatttgtgg gacctcgagg
      721 cgcaggtcgg cgtcgccatg gaagcgctcg gctgcccgcc cgccgactcc tcggtcgata
      781 ccctgtcggg cggcgagaag cgccgcgtgg cgctgtgcgc gctgctgctc agcaagcccg
      841 acctgctgct gctcgacgag ccgaccaacc acctcgacgc cgagaccacc gcgtggctcg
      901 aaaagcacct gcgcgagttt cccggcgcgg tgctgatcat cacccacgac cgctacttcc
      961 tcgacaacgt caccggctgg atcctcgagc tcgatcgcgg caagggcgtg ccctacgagg
     1021 gcaattattc cgcctatctc gactccaaga ccaagcggtt cgcgcaggaa gagcgcgagg
     1081 atgcagcacg tctcaaggtg ctcaacaagg aacgcgaatg gatggggcag agcccgcagg
     1141 cgcggcaggc caagtccaag gcgcgcgtca aggcctatga cgagctggtc aagctcaacg
     1201 atgcgcggac gctgtccaac accgcgcaga tcatcattcc acccggcgag cggctgggcc
     1261 agaacgtcat cgacatcgag ggcgtctcca agagctatgg cgaccgcctg ctcatcgaca
     1321 acctcacctt caagctgccg cccggcggca tcgtcggcgt catcgggccg aacggcgtcg
     1381 gcaagacgac gctgttccgc atgatcaccg ggcaggacaa gcccgacgcg ggcgagatcg
     1441 tcatcgccga cgcggtgcac ctgggctatg tcgaccagag ccgcgacacg ctcaacgcca
     1501 acaagaccgt atgggaggaa atctccggcg gcagcgaaat cctgatgctg ggcaagcgcg
     1561 agatgaactc gcgcgcctac accggcgcct tcaacttcaa gggcgccgac cagcagcaga
     1621 aggtcggcaa cctatccggc ggccagcgca accgcgtgca tctcgccaag atgctgaaat
     1681 cgggcgcgaa cgtccttctc ctcgacgagc ccaccaacga cctcgacacc gaaacgctgg
     1741 cggctttgga agaagcgctg gaggaattcg ccggctgcgc cgtgatcatc agccacgacc
     1801 gcatgttcct cgaccgcctc g
//
LOCUS       DATAZA010000534         2143 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1831341, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000534 DATAZA010000000
VERSION     DATAZA010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1831341"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..865
                     /locus_tag="VHZ56_13180"
     CDS             <1..865
                     /locus_tag="VHZ56_13180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019962705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4298967.1"
                     /translation="ASSHVPARRPAASGGPPVMVVDSVVRDYRVPARTPFGPAGSFRA
                     VDNVSFAIARGENVGLVGESGSGKSTLARAMMGLEAVQGGGIAVDGETYDAARGASFA
                     TRRKLQVVFQDPYGSFDPRQRVDVLVAEPFHLLGTAAPGGAERRTRVVKALEEVGLAA
                     ADAGKYIHEFSGGQRQRIAIARALIIEPALIILDEAVSALDVSIRAQILDLLAALSDR
                     LGISYLFISHDLSVVRAITDRVLVMKAGRIVESGRTEEVFRNPQHPYTQELIAATPTL
                     ERPLATGPAEA"
     gene            876..>2143
                     /locus_tag="VHZ56_13185"
     CDS             876..>2143
                     /locus_tag="VHZ56_13185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006931385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX4298968.1"
                     /translation="MTARPDPQLFFDPSRCFIGGRWLAPEGGEYLPVENPSDGTEIAQ
                     IPRGQKADIDAAVVAARAAMAGPWGRMPAAERGRILNRIGLKVLERVEELARIEALDV
                     GKPLKQARADAVALARYMEFYGGAADKVMGETVPYLDGYTVYTLRQPHGVTGHIIPWN
                     YPMQVLGRSVGGALCMGNAAVLKPAEEACLTAIAFAAIAQEAGLPDGVLNVVPGLGEE
                     AGAALTSHPDVNHISFTGSVAVGRMVQTAAAQNIVPVTLELGGKSPQLVFADADLERA
                     LSFLVNAGIQNAGQTCSASSRVLVDRRIHDQVLERMAARYRSLRVGPAIADLDVGPMV
                     SERQKEIVGGFLADLGGAEVAAEGRIEAEAPGGGHYLRPTLLAGVTPDNRLAQDEIFG
                     PVQVVIPFDSEEEAVAIANGTDYGLVAGVWT"
BASE COUNT          324 a          689 c          796 g          334 t
ORIGIN      
        1 ggcgtcctcg catgtgccgg cgcggcgccc tgcggcaagt ggcggccctc cggtcatggt
       61 cgtcgactcc gtggtccgcg actatcgcgt accggcccgc accccgttcg ggccggctgg
      121 ctcgttccgg gcggtcgaca acgtcagttt tgccatcgcc cgcggggaaa atgtggggct
      181 cgtcggcgaa agcggcagcg gcaagtccac tttggcgcgc gccatgatgg ggctcgaagc
      241 cgtgcaaggg gggggcatcg cggtcgacgg cgaaacctac gatgccgcgc gcggagcgag
      301 ctttgcgacg cggcgcaagc tgcaggtggt gttccaggac ccctatgggt cgttcgatcc
      361 acggcaacgg gtggacgtgc tggtggcgga gccgttccac ctgctgggaa ccgcggcgcc
      421 cggcggtgcg gagcggcgga cccgggtggt gaaggcgctg gaggaggtcg ggctcgcggc
      481 cgccgacgcc ggcaaataca tccacgagtt ctcggggggc cagcggcagc ggatcgccat
      541 cgcccgggcg ctgatcatcg agccggcgct gatcatcctc gacgaggcgg tgtcggcgct
      601 ggacgtctcc atccgcgcac agattctcga tctgctcgcg gcgctgtccg atcggctcgg
      661 catctcctat ctcttcatct cgcacgacct gagcgtggtg cgggcgatca ccgatcgcgt
      721 gctggtgatg aaggccggcc gcatcgtcga gagcgggcgc accgaggagg tgtttcgcaa
      781 tccgcagcat ccctacacgc aggagctgat cgcggcgacg ccgacgctcg agcgcccgct
      841 tgcgaccgga ccggccgagg cgtaaggcgc agggcatgac cgctcgaccc gatccgcaac
      901 tcttcttcga tccctccaga tgcttcatcg gcggccgctg gctggcgcct gagggcggcg
      961 agtacctgcc ggtcgagaac ccgtcggatg gaacggaaat cgcgcagatc ccgcgcggac
     1021 agaaggccga catcgacgca gcggtcgtag cggcgcgggc agcgatggcg ggcccctggg
     1081 gccggatgcc ggcggcggaa cggggccgca tcctgaaccg catcgggctg aaggtgctcg
     1141 agcgggtcga ggaactggcg cgcatcgagg cgctggatgt cggcaagccg ctgaagcagg
     1201 cgcgtgccga tgcggtggcg ctggcgcgat acatggaatt ctatggcggc gccgccgaca
     1261 aggtgatggg cgagaccgtt ccgtatctcg acggctacac ggtctatacg ctccggcaac
     1321 cgcacggcgt caccggccac atcattccct ggaactaccc aatgcaggtg ctcggccgct
     1381 ccgtcggcgg cgcgctctgc atgggcaacg ccgccgtgct gaaaccggca gaggaagcct
     1441 gcctcaccgc aattgccttt gcggcgatcg cgcaggaggc ggggttgccc gacggagtgc
     1501 tgaacgtcgt gcccgggctc ggcgaggaag caggcgcggc gctcaccagc catccggatg
     1561 tcaaccatat ctcgttcacc ggctcggtgg cggttggccg gatggtgcag acggcggcgg
     1621 cgcagaacat cgttccggtg acgctggagc tgggcggcaa gtcgccgcag ctggtgtttg
     1681 ccgatgccga cctcgagcgg gcgctgtcgt tcctcgtcaa tgccggtatc cagaacgccg
     1741 gccagacgtg ctcggcgagt tcgcgcgtcc tggtggaccg gcggatccac gaccaggtgc
     1801 tcgagcgcat ggcggcgcgc tatcggtcct tgcgcgtggg gccggcgatt gccgacctcg
     1861 atgtcggccc gatggtatcg gagcgacaga aggagatcgt cggcggcttc ctggccgacc
     1921 tcggtggtgc cgaggttgct gccgaagggc ggatcgaggc ggaggcgccc gggggcggtc
     1981 actatttgcg gccgacactg cttgccggcg tgacgcccga caaccggctg gcgcaggacg
     2041 agatattcgg gccggtgcag gtggtcatcc cgttcgacag cgaggaggag gccgtcgcca
     2101 tcgccaacgg caccgactac ggactggtcg cgggcgtctg gac
//
LOCUS       DATAZA010000535         1874 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_785427, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000535 DATAZA010000000
VERSION     DATAZA010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_785427"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1874)
                     /locus_tag="VHZ56_13190"
     CDS             complement(<1..>1874)
                     /locus_tag="VHZ56_13190"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HEX4298969.1"
                     /translation="ALWRGIPELPDGRRGTSEKTRWIEGHAALVEDRADALLATARAA
                     EIIGELEAAVAEAPLRERRWGQLMLALYRAGRQGDALGAYQRARTLLADELGVDPGPE
                     LRRLEAAIVAQDAALDVVIAQQHPSVMRAVTFLLTDIEGSTAAWEADAQAMAVALARH
                     DELAEQVVTSRGGRLIKTRGEGDATFSVFERPSAAAAAAMELQDAIIHEQWGLREPMR
                     IRIALHTGEVELRDGDYFGRAVNRAARLRSLAIGGQILCSGATAELVIDALPDDVVLA
                     DLGLRELRNLARPEHVFELRLETIEESVQPPTSDAPMERPGLPSVLIGTGPFVGRGSE
                     LERLLSGWQTSLGGGACAALIAGEPGVGKTRLAGEWSRQAYEQGAVVLYGRCDEDLGA
                     PYQPFAEALRSLVPCVGTSRLRGLRGVEALLPLVPGLVDDVPDLAAPTRADPDTERYA
                     LFDAVVALLELASTEAPVVLVLDDLHWAAKPTLLLLRHVLRFGDRARVQIVGTYRSTD
                     LDRSHPLAAMLADLHRDGTASRINLSGLDEDDVSAYVAKAGYDDEELGHALASVTGGN
                     PFFLIEALRHVDESGGVWDPSTLPQGVREAVSRRLSRLPIETNKALAAAAVVGSRFAL
                     "
BASE COUNT          309 a          635 c          623 g          307 t
ORIGIN      
        1 tccagagcaa accggctgcc gacgaccgcg gctgcggcga gggccttatt ggtctcgatc
       61 ggaagccgag aaagtctgcg gctcacggct tctcgcactc cctgtgggag cgtgctcggg
      121 tcccacacgc cgccgctctc atcgacatgg cgcagagcct cgatgaggaa gaacgggttg
      181 ccgcccgtga cggaggccaa tgcgtggccg agctcttcgt cgtcgtaccc ggctttggcg
      241 acgtacgcgc tgacgtcgtc ctcatcgagg ccgctgagat tgatgcggct ggcggtgccg
      301 tcgcggtgaa ggtcggccag catcgccgcc agagggtggg agcggtcgag atcagtgctg
      361 cggtaggtgc cgacgatctg gacgcgcgcg cggtcgccga agcgcagcac atgtcgtaac
      421 aggagcagcg ttggcttggc cgcccagtgc aggtcgtcga gtaccaggac aaccggcgct
      481 tccgtggaag ccaattccaa gagtgcaacg acggcgtcga aaagtgcgta gcgctcggtg
      541 tcggggtcgg cgcgcgtcgg cgcggccaga tcgggcacgt cgtcgacgag cccggggaca
      601 aggggaagca aggcttcgac gccgcgcagt ccgcgcaacc ggctagtgcc tacgcacggc
      661 accagcgaac gcaaggcttc cgcgaagggc tgataaggcg caccgaggtc ctcgtcgcaa
      721 cggccgtaca gcacgaccgc gccttgctca taggcctgcc gggaccactc gccggccagg
      781 cgcgtcttgc cgacacccgg ttccccggcg atcagggcgg cgcacgcacc accgccaagc
      841 gaggtctgcc acccagacag aagccgctcg agttcgctcc cgcgcccgac gaacggcccg
      901 gtaccgatca gaaccgaggg caggcccggc cgctccatcg gcgcatcgct tgtcggcggt
      961 tggacactct cctcaatggt ttccagtcgg agctcgaaga catgctccgg gcgggcgagg
     1021 ttgcgcagtt cgcgcaaacc caggtcggcg aggacaacgt cgtcgggcag tgcatcgatg
     1081 acgagctcgg ccgtcgcgcc agagcacaaa atttgaccac ctatagccag cgatctcagg
     1141 cgggcggccc ggttgaccgc cctaccgaag tagtcgccat cgcggagctc gacttcgccg
     1201 gtgtgcagtg caatccggat acgcatcggc tctcgcaggc cccactgctc gtggatgatt
     1261 gcgtcttgca gctccatagc ggccgcggct gctgccgacg gtcgctcgaa taccgagaac
     1321 gtcgcgtcgc cctcgccgcg tgtcttgatc agccgtcctc cccgcgacgt gaccacctgt
     1381 tccgcgagtt cgtcgtgtcg ggcaagcgcc actgccatag cttgggcgtc tgcctcccag
     1441 gcggccgtcg atccctcaat gtcggtgagt agaaaggtta ctgcgcgcat caccgacgga
     1501 tgttgttgtg ctataacaac atccagtgcc gcatcttgtg cgacgatggc agcctcaagt
     1561 cgtcgaagct ccggcccggg atcgactccc aactcgtcgg ccagcagcgt ccgtgcccgt
     1621 tgatacgcgc cgagagcgtc accttgacgg ccggcgcggt agagggcgag catgagctgg
     1681 ccccatcgcc tttcgcgcag cggcgcctcg gccaccgccg cctcgagctc gccgatgatc
     1741 tccgcggcgc gggccgtcgc gagcagtgcg tcggctcgat cctccacgag cgcggcgtgg
     1801 ccctcgatcc atcgtgtctt ttcggatgtt ccccgcctac cgtcgggcag ttcggggata
     1861 cctcgccaga gggc
//
LOCUS       DATAZA010000536         2908 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1481685, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000536 DATAZA010000000
VERSION     DATAZA010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2908
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1481685"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..875)
                     /locus_tag="VHZ56_13195"
     CDS             complement(<1..875)
                     /locus_tag="VHZ56_13195"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HEX4298970.1"
                     /translation="MLGSLSVLALSGCSGGGIQFPSFGGPSPPADTGSGLPAIEGQSI
                     GSGPVRVALLLPLSGDPSLTTVGQSMANGAQLAMEFIGGNANMHDNITLAIKDSGTTA
                     PSAAAAASQAVQEGASLILGPLKADQVSAAGAVARSAGLPLIGFSNNSGVAAPGVYLL
                     NVLPETEVRRSLSYAKAQGRKALAGVFPNNDFGHIQQSAFQQAAADLGLNIVGVYNFG
                     SQADATSVVAQLAPVLTSGRVDTLFLPDRATAPSFGALLQQANVPAGGILVVGSADWN
                     GDPTILAAPFLQGAI"
     gene            1002..1883
                     /gene="rsmI"
                     /locus_tag="VHZ56_13200"
     CDS             1002..1883
                     /gene="rsmI"
                     /locus_tag="VHZ56_13200"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEX4298971.1"
                     /translation="MHERRYFIAGTAFAAPELPPGLHVVATPIGNLRDITLRALETLA
                     AADVIYCEDTRTSARLCEHYGIDTPRKALHEHNERALIDTIVDDLGRGGRVALISDAG
                     TPLLSDPGFPLVRAAREAGLPVLAAPGASALLAALAIAGLPTDAFSFFGFLPVKAEAR
                     ATALAALAGRRETLVFYESPRRLEETLLAMARAFGGDRPAAVALELTKKFERLNRASL
                     AELAAQFAGAETRGEAVILVGGGSDVVADPAEWQAALAAAMASEPLRAAVDAIAIRFN
                     LRRKEVYDAALALKTEE"
     gene            1852..2247
                     /locus_tag="VHZ56_13205"
     CDS             1852..2247
                     /locus_tag="VHZ56_13205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEX4298972.1"
                     /translation="MPRSPSRPRSSVRRFAESAGRRGELWAALFLAAKRYRVIARRVK
                     TPVGEIDLIARRGAATVFVEVKSRSFSHQEEEALGAVNRRRIVRAAQFWLARHPALAA
                     TDLRFDVIFLAPFAWPRHIVNAFDATGMD"
     gene            2247..>2908
                     /gene="gshB"
                     /locus_tag="VHZ56_13210"
     CDS             2247..>2908
                     /gene="gshB"
                     /locus_tag="VHZ56_13210"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006160391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HEX4298973.1"
                     /translation="MRLKVAVQMDPIASINPVGDSTFAMMLEAQLRGHGLDYYTVASL
                     GLRDNVLTAAVQPIEVFDKPKGEHFRLGETARRNLADYDVVLMRQDPPFDMNYTTITH
                     MLERIHPRTFVVNPPAAVRNAPEKILVTEFPELMPPTLVTRDRALIQAFRKEHGNIIV
                     KPLYGNGGAGVFLIEEGSHNLVSLLELFETAFREPFMVQRYLPEVRQGDKRIILVDGE
                     PVG"
BASE COUNT          433 a         1063 c          971 g          441 t
ORIGIN      
        1 tagatcgccc cctgcaggaa cggcgccgca aggatcgtcg gatcgccgtt ccagtcggcc
       61 gagccgacca ccaggatgcc gcccgccggc acattggcct gctgcagcag cgcgccgaaa
      121 ctcggcgccg tggcgcgatc gggcaggaac agcgtgtcga cgcggccgga ggtcagcacc
      181 ggcgccagct gcgccaccac gctggtcgca tcggcctggc tgccgaaatt gtagacgccg
      241 acgatgttga gcccgagatc ggccgccgcc tgctggaagg cgctctgctg gatgtggccg
      301 aaatcattgt tgggaaaaac cccggccagc gccttgcggc cctgcgcctt ggcatagctc
      361 agcgagcgcc gcacctcggt ctcgggcagc acgttgagca ggtatacgcc aggggcggcg
      421 acgccggaat tgttggaaaa cccgatcagc ggcagcccgg ccgagcgcgc cacggccccg
      481 gcggcgctga cctggtcggc cttcagcggg ccgaggatca ggctcgcgcc ctcctgcacc
      541 gcctggcttg ccgccgccgc cgcgctcggc gccgtcgtgc cgctgtcctt gatggcgagc
      601 gtgatgttgt cgtgcatgtt ggcgttgccg ccgatgaact ccatcgccag ctgcgccccg
      661 ttggccatcg actggccgac cgtcgtcagg ctgggatcgc cgctgagcgg cagcagcagc
      721 gccacccgca ccggcccgct gccgatgctc tggccctcga tcgccggcag gccactgccg
      781 gtgtcggcgg gcggcgaggg tccgccgaag ctcggaaact ggatgccgcc gccgctgcag
      841 cccgacagcg ccagcaccga caggctgccg agcaacgttt gtctccggct gaaccggatg
      901 gtctccactc tgccgaatcc ccgctcccgt ggcttcgagc tatacaaaac cggaacgcct
      961 ccttaaagac aggctttctg caccttgttc aggacttttc ggtgcacgaa cgccgctatt
     1021 tcatcgccgg caccgcattt gcggcgcccg aactgccacc cggcctgcac gtggtggcca
     1081 ccccgatcgg caacctgcgc gacatcaccc tgcgcgccct cgagacgctc gccgccgccg
     1141 acgtcatcta ttgcgaggac acccgcacca gtgcacggct ctgcgagcat tacggcatcg
     1201 acacgccgcg caaggccctg cacgagcaca acgagcgggc gctcatcgac accatcgtcg
     1261 acgatctcgg ccgcggcggg cgggtggcac tgatctccga cgccggcacg ccgctgctct
     1321 ccgatccggg ctttccgctg gtgcgcgcgg cgcgcgaggc ggggctgccg gtgctcgccg
     1381 caccgggcgc ctcggcgctg ctggccgccc tcgccatcgc cggcctgccg accgacgcct
     1441 tcagcttttt cggcttcctg ccggtgaagg ccgaggcgcg ggcgacggcg ctggcggcgc
     1501 tcgccggccg ccgcgaaacg ctggtgttct acgaatcgcc gcgccggctg gaggagaccc
     1561 tgctcgccat ggcccgggcc ttcggcggcg accgcccggc ggcagtggcg ctcgagctca
     1621 ccaagaagtt cgagcggctg aaccgcgcca gcctcgccga actcgcggcg caattcgccg
     1681 gtgccgaaac ccgcggcgag gcggtgatcc tcgtcggcgg cggcagcgac gtggtggccg
     1741 atccggccga gtggcaggcg gcgctcgccg cggcgatggc gtccgagccg ctgcgcgccg
     1801 cggtcgatgc catcgccatc cgcttcaacc tccggcgcaa ggaggtctac gatgccgcgc
     1861 tcgccctcaa gaccgaggag tagcgtccgc cgcttcgccg aaagcgccgg ccgccgcggc
     1921 gagctgtggg cggcgctgtt cctggccgcc aagcgctacc gcgtcatcgc ccgccgggtg
     1981 aagacgccgg tgggcgagat cgacctgatc gcccggcgcg gcgccgccac cgtcttcgtc
     2041 gaggtcaagt cgcgcagctt ctcgcaccag gaggaggagg cgctgggcgc cgtcaaccgc
     2101 cgccgcatcg tgcgggctgc gcagttctgg ctggcgcggc atccggcgct ggcggcgacc
     2161 gacctgcgct tcgacgtgat tttccttgcg ccctttgcct ggccgcggca catcgtcaac
     2221 gccttcgacg ccaccggaat ggactgatgc gcctcaaagt cgccgtgcag atggacccca
     2281 tcgcctctat caatccggtg ggggattcga cctttgccat gatgctcgag gcgcagctgc
     2341 gcgggcatgg gctcgactac tacacggtgg cctcgctcgg gctgcgcgac aacgtgctga
     2401 cggccgccgt gcagcccatc gaggtcttcg acaaacccaa gggcgaacat ttccggctgg
     2461 gcgaaacggc gcgccgcaac ctcgccgatt acgacgtggt gctgatgcgg caggacccgc
     2521 cgttcgacat gaactacacc accatcaccc acatgctgga gcgcatccat ccgcgcacct
     2581 tcgtggtcaa cccgccggcg gcggtgcgca acgcgcccga aaagatcctc gtcaccgaat
     2641 tccccgagct gatgccgccg acgctggtga cgcgcgaccg cgcgctgatc caggctttcc
     2701 gcaaggaaca cggcaacatc atcgtcaagc cgctctacgg caatggcggc gccggcgtgt
     2761 tcctcatcga ggaggggagc cacaatctgg tgtcgctgct cgagctgttc gagacggcgt
     2821 tccgcgagcc gttcatggtg cagcgctacc tgcccgaggt gcgccagggc gacaagcgca
     2881 tcatcctcgt cgacggcgag ccggtggg
//
LOCUS       DATAZA010000537         2857 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_322839, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000537 DATAZA010000000
VERSION     DATAZA010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2857
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_322839"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1435)
                     /locus_tag="VHZ56_13215"
     CDS             complement(<1..1435)
                     /locus_tag="VHZ56_13215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011579772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEX4298974.1"
                     /translation="MNDTLTAAAETDYSATLFLPETAFPMRAGLPEREPHWLRRWEDM
                     DLYGMQRRQMHGKPLFTLHDGPPYANGNIHIGHALNKTLKDLVSRSMNMLGFNSAYVP
                     GWDCHGLPIEWKIEEQYRAKGKDKNEVPVNEFRAECRSFAQHWVDTQREEFKRLGVIG
                     DWANPYLTMSFDAEAQIARELMKIAASGQLYRGSKPVMWSVVERTALAEAEIEYADYE
                     SDTIWVKFPIRSGNGAFGTADFEDLNAAVVIWTTTPWTIPANRAISYSSRIAYGLYEV
                     TGAPDGNWAAVGEKYVLADKLAPDTFAKAKVQSYIRLSDVDCSRIVSCNHPLRGLGGG
                     YNFEVPLLDGEHVTDDAGTGFVHTAPSHGLDDFEVWLKSTRKLQSLGIDPAIPYTVDD
                     AGFFTADAPGFEGGRVLDDSGKKGDANQRVISALAERGMMAARGRLKHQYPHSWRSKK
                     PILFRNTPQWFVYMDRDIGGKPGDTLRA"
     gene            complement(1546..2520)
                     /locus_tag="VHZ56_13220"
     CDS             complement(1546..2520)
                     /locus_tag="VHZ56_13220"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009758907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEX4298975.1"
                     /translation="MTSFYRLDGLDSVPAALRGAVVAIGSFDGVHRGHQAVLDRLKAQ
                     ARARNVPALMLTFEPHPRDVFAPAPFMFRLTPPDAKARLCAALGLDGIVLMPFSRDLS
                     MVQAEDFVSRFLVRALRVSGVVVGADFHFGHNRRGTPDFLRAAGAVHGFSVDILDLLP
                     EGAEAVSSSRIRAALTAGDVATANRLLGYHWFFGGEVVKGDQRGRLLGFPTANIATAS
                     TFALAQGVYAVRARLGERLLDGVASFGKPMFNNELPPFETFLFDFDADIYGRHLEIAL
                     ISHIRGQELFKHLDELIAAIARDSRKAREALGQCEAIGELDRTLGFFE"
     gene            complement(2545..>2857)
                     /locus_tag="VHZ56_13225"
     CDS             complement(2545..>2857)
                     /locus_tag="VHZ56_13225"
                     /inference="COORDINATES: protein motif:HMM:NF024639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HEX4298976.1"
                     /translation="YEARGGMIRMAGKPYRPIYEDALKLAETAAGRTLDRRRLLAIGD
                     SVRTDAIGAANAGIDLLFITGSIHAGELDAFGEADPAAVEALVAPSGARLKGFMPRLA
                     W"
BASE COUNT          436 a          853 c         1094 g          474 t
ORIGIN      
        1 gggcgcggag cgtgtcgcct ggcttgccgc caatgtcgcg gtccatgtag acgaaccatt
       61 gcggggtgtt gcggaagagg atcggcttct tcgaacgcca gctgtgcgga tactggtgct
      121 tcagccggcc gcgggcggcc atcatgccgc gctcggcgag tgcgctgatg acgcgctggt
      181 tggcgtcgcc cttcttgccg ctgtcgtcga ggacacggcc gccctcgaag ccgggtgcgt
      241 ccgccgtgaa gaagccggcg tcatcgacgg tgtaggggat ggcggggtcg atgccgagcg
      301 actgcagctt gcgggtcgac ttgagccaga cctcgaaatc gtcgaggccg tggctgggcg
      361 cggtgtggac gaagccggtg ccggcgtcgt cggtgacgtg ctcgccatca agcagcggga
      421 cttcgaagtt gtagccgccg ccgaggccgc ggagaggatg attgcaggag acgatcctgc
      481 tgcaatccac gtcggacagc cggatgtacg actgcacctt ggccttggcg aaggtgtcgg
      541 gggcgagctt gtcggcgagc acgtatttct cgccgacggc cgcccagttg ccgtcgggcg
      601 ctccagtcac ctcgtagagg ccgtaggcaa tgcggctcga ataggagatg gcgcggttgg
      661 ccgggatggt ccacggggtc gtggtccaga tgaccaccgc agcgttgagg tcctcgaaat
      721 cggcagtgcc gaaggcgccg ttgcccgagc ggatcgggaa cttcacccag atggtgtcgc
      781 tctcgtagtc ggcgtattcg atttcggcct cggccagcgc cgtgcgctcg accaccgacc
      841 acatcaccgg cttgctgccg cgatagagct ggccggaagc ggcgatcttc atcagctcgc
      901 gggcgatctg ggcttcggcg tcgaagctca tggtcagata cgggttggcc cagtcgccga
      961 tgacgccgag gcgcttgaac tcctcgcgct gggtgtcgac ccagtgctgg gcgaagctgc
     1021 ggcactcggc gcggaattcg ttgaccggaa cctcgttctt gtccttgccc ttggcgcggt
     1081 actgttcctc gatcttccat tcgatgggca ggccatggca gtcccagccc ggcacgtagg
     1141 ccgagttgaa gccgagcatg ttcatcgagc gggagacgag gtccttgagg gtcttgttga
     1201 gggcgtgccc gatgtggatg ttgccgttgg cgtagggcgg gccgtcgtgc agcgtgaaca
     1261 gcggcttgcc gtgcatctgc cggcgctgca tgccgtagag gtccatgtcc tcccagcgcc
     1321 tgagccagtg cggctcgcgc tcgggcaggc cggcgcgcat ggggaaagcg gtctcgggca
     1381 ggaacagggt cgcggaatag tcggtctcgg ccgcggccgt cagggtgtcg ttcatcttgg
     1441 gctcgaatgg cggaattgcc gggcttttag caacgatggg cggcgtgggc aaaggctgat
     1501 ttggcggcgg agtccgggcg tgggtggtcc cctcgccggt cgccgttact cgaaaaagcc
     1561 cagcgtgcgg tccagctcgc cgatggcctc gcactggccg agtgcctcgc gggccttgcg
     1621 gctgtcgcgg gcgatggcgg cgatgagctc gtcgaggtgc ttgaacagct cctggccgcg
     1681 gatgtgggag atgagggcga tttcgaggtg gcggccgtag atgtcggcgt cgaaatcgaa
     1741 gaggaaggtc tcgaacggcg gcagctcgtt gttgaacatc ggcttgccga agctggcgac
     1801 gccgtcgagc agcctttcgc ccagccgggc gcggacggcg tagacgccct gggccagcgc
     1861 gaaggtcgag gcggtggcga tgttggcggt gggaaagccg agcagccggc cgcgctggtc
     1921 gcccttcacc acctcgccgc cgaagaacca gtgatagccg agcagccggt tggcggtggc
     1981 gacgtcgccg gcggtgagcg cggcgcggat gcgcgacgac gacaccgcct cggcgccttc
     2041 cggcaagaga tcgaggatat cgacggaaaa gccgtgcacg gcaccggcgg cgcgcaggaa
     2101 atcgggggtg ccgcggcggt tgtggccgaa atggaagtcg gcgccgacga cgacgcccga
     2161 gacgcgcagg gcgcggacga ggaagcggga gacgaaatcc tcggcctgca ccatgctgag
     2221 gtcgcggctg aacggcatca gcacgatgcc gtcgagcccg agcgcggcgc agaggcgcgc
     2281 cttggcgtcg ggcggcgtca gccggaacat gaagggcgcg ggcgcgaaga cgtcgcgcgg
     2341 atgcggctcg aaggtcagca tcagcgccgg gacgttgcgg gcgcgggcct gggccttgag
     2401 ccggtcgagc accgcctggt ggccgcggtg cacgccatcg aacgagccga tggcgacgac
     2461 ggcgccccgg agcgccgcgg gtacgctgtc gaggccgtcg aggcgataga agctggtcat
     2521 ttttttctta tggcaacagg ccgctcacca cgcaaggcgc ggcatgaagc ccttgaggcg
     2581 ggcgccgctg ggggcgacca gcgcttcgac cgcggcggga tcggcctcgc cgaaggcatc
     2641 gagttcgccg gcgtggatgg aaccggtgat gaacagcagg tcgatgccgg cattggcggc
     2701 gccgatggcg tcggtgcgga cgctgtcgcc gatggcgagc agccggcggc gatcgagggt
     2761 acgcccggcg gcggtttctg ccagcttcag ggcgtcctcg tagatcggcc ggtagggctt
     2821 gccggccatg cggatcatgc cgccgcgcgc ttcgtag
//
LOCUS       DATAZA010000538         7144 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4036890, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000538 DATAZA010000000
VERSION     DATAZA010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 7144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7144
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4036890"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..791)
                     /locus_tag="VHZ56_13230"
     CDS             complement(<1..791)
                     /locus_tag="VHZ56_13230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEX4298977.1"
                     /translation="MTNVALTGLARDLARRADENRPIRIGVIGSGEMGTDLVTQGMLM
                     RGIEISAIATRRPHTALEATAIAYGDTSHAVEADTRSKISAAIAGKKLAITSAEMLVQ
                     TPEIDVVIDATGKPGVAADFDLMAMEHGKHLVMMNVEADVTIGPYLKQEADRLGVIYS
                     VGAGDEPSSCMELIEFATALGYRIVSAGKGKNNPLNHDAVPDDYREEATRRNMNPRML
                     VEFVDGSKTMVEMCAIANATGLVPDVPGMHGPKADRDQMVKVLIP"
     gene            1036..2064
                     /locus_tag="VHZ56_13235"
     CDS             1036..2064
                     /locus_tag="VHZ56_13235"
                     /inference="COORDINATES: protein motif:HMM:NF004127.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003860 - 3-hydroxyisobutyryl-CoA
                     hydrolase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyisobutyryl-CoA hydrolase"
                     /protein_id="HEX4298978.1"
                     /translation="MTDELEISTDGALGLIALNRPQAINALSRAMIEGITGALLGWRD
                     DPAIGAAMFSGNGAKGFCAGGDVRAARALVLAGRAAEADAYFAAEYRMNGLIARYPKP
                     LVALSHGITMGGGIGIAGHCRFRITRSGARFAMPESAIGFFADVGVNAILARAPLNRA
                     LLFLLSGLSVGPADALALGLADAVIAEDRIGTLRDRVARAAGEADPTAAIGRLLEAET
                     VEAGDASFALLADQLPSDAPATAAEFVARVADVPALVELSALLASRSPSALSATFCAQ
                     LEARRQMDVAATLGADLRLARLMARGPDFAEGVRAVLVDKDQAPKWQPARLAEVDVAV
                     LRRALEGP"
     gene            2170..2463
                     /locus_tag="VHZ56_13240"
     CDS             2170..2463
                     /locus_tag="VHZ56_13240"
                     /inference="COORDINATES: protein motif:HMM:NF024857.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEX4298979.1"
                     /translation="MAETDDPKIVALPPIVDLDALDTVRDGLIEAVELGPVRVDASGV
                     ERVATNALFMLISAAETSRRNSYGFAVTGASAPLLAAIDRLGLRGSFSALMKG"
     gene            2470..2829
                     /locus_tag="VHZ56_13245"
     CDS             2470..2829
                     /locus_tag="VHZ56_13245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4298980.1"
                     /translation="MRVLTVDDSRTILAMLHHTLSNAGFEVLQAEDGQKGLDVLARES
                     VDVVITDINMPVMDGIEFIKQVRASGEHNSLPILILTTETSQDKRDQGRSAGGTGWIV
                     KPFDPEKLISVIHRVVH"
     gene            2864..5116
                     /locus_tag="VHZ56_13250"
     CDS             2864..5116
                     /locus_tag="VHZ56_13250"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HEX4298981.1"
                     /translation="MSDLDDFKATYFDECSELLLDLEEQFAAIAGGDRTAGRLNAVFR
                     AIHSIKGGAGAFGFGELVGFAHAYETLLDHVRDGRVQMSEPVAALCIRANDIVADFVG
                     AAKAGTSLGAGYGADERSQFDALSSGAPLVAIDEGAADEFDIDFVPVMVNLEPRGEPL
                     TDSFALAPLAVERGHWEIRFAPHSELYARANDPLLLFRELASLGELSVVARLGEIPAL
                     ADFEPMGVYCSWELTLISPTATADSIAEVFEFVEGNCDLLIAELSPRRPKAAKSLAEL
                     AMLVTPPSRPAVMPMAAPAVEAPSLADLADALKQETPRRAAVAAVAASAPSSPHPVEI
                     DPAPSMASEELDDRRVGETDRRGSSVQSIRVDLDKVDRVVNMVGELVITQSMLTQQMD
                     DTLRARYQELVRGLEVLAQTTRGLQDAVMAIRAQPVKSVFSRMPRLVRELAQKTGKKI
                     RLETVGEATEIDKTVIEQLSDPLTHMIRNSADHGIESPEKRRALGKPEIGTIRLSAEQ
                     AGGNILIAVEDDGGGINRERVVQVARDRMVIGPDQQLSEEQIDNLIFAPGFSTAETVS
                     DISGRGVGMDVVLSNIKKIGGSVHVRSKAGQGTRMTLRLPLTLAVLDVMLVKVGPSPY
                     VVPLSSIVETIQCSRADFGRAPSGAKVLRVRGEYVQVVDLAERFELGGAAELANRFVV
                     LCEAEGGAKVALVVDDIIGQQQVVIKSLEENFESIEGIAGGTILGDGNVALIVDVQGL
                     KAQKLHRNAA"
     gene            5140..5628
                     /locus_tag="VHZ56_13255"
     CDS             5140..5628
                     /locus_tag="VHZ56_13255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HEX4298982.1"
                     /translation="MDSLAYKDDYGALTQVNAQNSLQLIAFSIGEQTYGVEITTVREI
                     RAWNGATPLPNTRDYVRGVINLRGTIVPIFDLRARFGEGQTSPTKNHVVVVMSVGDKW
                     VGILVDAVSDILTVSKDDIHNVPEGNSIDTELLNGIVTHESRMVGLIDLHAVVSGAKV
                     DD"
     gene            complement(5707..6060)
                     /locus_tag="VHZ56_13260"
     CDS             complement(5707..6060)
                     /locus_tag="VHZ56_13260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298983.1"
                     /translation="MSLQKLARELDETARQTAAMVEGVTYALEVLGDKTLSCADARRE
                     AMAIIVNALQGQDRIEQRCQNMALAVRQFALLPPTAPDSIYDEIWANLVLDELRVPAL
                     SGIAATPSRGDVDLF"
     gene            6222..6815
                     /locus_tag="VHZ56_13265"
     CDS             6222..6815
                     /locus_tag="VHZ56_13265"
                     /inference="COORDINATES: protein motif:HMM:NF015908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298984.1"
                     /translation="MTSSRAAAPAFERGVVTTIHQGDCLVSGDEDLTYSTILGSCVSA
                     CVRDREAAIGGMNHFLLAEPSSNARDRYGASARYGAFAMEQLINKVLSRGTGRKANLE
                     IKVFGGGLITAALTDIGAKNIDFVQQFLNDEGYVIAGGDVGGNFARRVMFRPHSGRAF
                     VKRLDSVAGASVAREELTIVSSRRIARRPPADDIELF"
     gene            6921..>7144
                     /locus_tag="VHZ56_13270"
     CDS             6921..>7144
                     /locus_tag="VHZ56_13270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298985.1"
                     /translation="MRRTRVALIVNFVWLAAAVVAGLALWLGGGRWPGYVAALIVLAA
                     AFAIGLGLAAAIERRVQRKLAALGRAVGAVG"
BASE COUNT         1145 a         2221 c         2593 g         1185 t
ORIGIN      
        1 ttggggatca gcaccttgac catctggtcg cggtcggcct tcgggccgtg catgccgggg
       61 acgtcgggga cgaggccggt ggcgttggcg atggcgcaca tctcgaccat ggtcttggag
      121 ccatcgacga actcgacgag catgcgcggg ttcatgttcc ggcgggtggc ttcctcgcga
      181 tagtcgtcgg ggacggcgtc gtggttgagg gggttgttct tgcccttgcc ggcggaaacg
      241 atgcggtagc cgagcgcggt ggcaaactcg atgagctcca tgcacgagct cggctcgtcg
      301 ccggcgccga cggaatagat cacgcccagg cggtcggcct cctgcttgag gtagggcccg
      361 atggtgacgt cggcctcgac gttcatcatc accaggtgct tgccgtgctc catcgccatg
      421 aggtcgaaat cggcggcgac gccgggcttg ccggtggcat cgatgacgac gtcgatctcg
      481 ggggtctgca cgagcatctc ggccgaggtg atggcgagtt ttttgccggc gatggcggcc
      541 gaaatcttgc tgcgcgtgtc ggcttcgacg gcgtggctgg tgtcgccgta ggcgatagcg
      601 gtggcctcga gcgcggtgtg cgggcggcgg gtggcgatgg cggaaatctc gatgccgcgc
      661 atcagcatgc cctgggtgac gaggtcggtg cccatctcgc ccgaaccgat gacgccgatg
      721 cggatcgggc ggttctcgtc ggcgcggcgg gcgagatcgc gggcaaggcc ggtgagggcg
      781 acgttggtca gcgaggcgta gggcggcatg gaggttccgt agcaccgcac gtgcagtccg
      841 tcactctcct ccgcgcgtgg agggtaccgc agccagagcc gccaggctgg ttagcggagc
      901 cagggtgggg gtgacatact ctgtgccgac cagcccccct ccgactcgat cacggacttg
      961 gcgacgagcc aagtcctcgt ttcctccccc gcggggggag gtgacccgac tgctcgtgcg
     1021 gggtaggagg atcgcatgac ggacgaactc gaaatctcga ccgatggcgc gcttggcctc
     1081 atcgccctca accggccgca ggcgatcaat gcgctgtcgc gggcgatgat cgaggggatc
     1141 accggggcgc tgctcggctg gcgcgacgat ccggcgatcg gggcggcgat gttcagcggc
     1201 aacggcgcca agggcttctg cgccggcggc gacgtgcggg cggcgcgggc gctggtgctg
     1261 gcgggccggg cggccgaggc ggacgcgtat tttgccgcag aataccggat gaacgggctg
     1321 atcgcgcggt atcccaagcc gctggtggcc ctgagccacg gcatcaccat gggcggcggc
     1381 atcggcatcg ccggccattg ccgtttccgc atcacccggt ccggcgcgcg cttcgccatg
     1441 ccggaatcgg cgatcgggtt ctttgccgat gtcggggtca acgccatcct cgcgcgggcg
     1501 ccgctcaacc gggcgctgct gttcctgctg tcgggcctga gcgtcgggcc ggccgacgcg
     1561 ctggcgctgg gcctcgccga cgcagtgatc gccgaggacc gcatcggcac gttgcgcgac
     1621 agggtggcgc gggcagcggg cgaggccgat ccgacggcag caatcggccg gctgctcgag
     1681 gctgagacag tggaggcggg ggacgcctcg ttcgcgctcc tcgccgatca gctgccgagc
     1741 gacgcgccgg cgacagcggc tgagttcgtc gcgcgggttg ccgacgtgcc ggcgctcgtc
     1801 gagctgtcgg cgctgctggc gagccgcagc ccgagcgccc tcagcgcgac gttttgtgcg
     1861 cagctcgagg cgcgccggca gatggatgtc gcggcgacac tcggcgccga tctcaggctg
     1921 gcgcggctga tggcgcgcgg gcccgatttt gccgagggag tgcgggcggt gctggtcgac
     1981 aaggaccagg caccaaagtg gcagccggca aggcttgccg aagtcgacgt cgcggtcctt
     2041 cgccgggcgc tcgaagggcc ttgagaagcg gcgatttcgc cggcttggcg gcacgtggtt
     2101 agcacttctt aaaccgttcc cccgcagact gccggcgggg cggaatgccc ttttggggac
     2161 cggctcgcaa tggccgaaac ggacgatccg aagatcgtgg cgctgccacc gatcgtcgat
     2221 ctcgatgcgc tcgacaccgt gcgcgacggc ctgatcgagg cggtcgagct cgggccggtc
     2281 cgcgtcgatg cgtcgggcgt cgagcgggtc gcgaccaatg ccctgttcat gctgatcagc
     2341 gccgccgaga cgtcgcggcg caacagctac ggcttcgcgg tgaccggtgc gagtgctccc
     2401 ctgcttgccg ccatcgaccg gctgggattg cgcggcagct tttccgcgtt gatgaaagga
     2461 tagtcgcgca tgcgcgttct gacggttgac gattcccgca ccatcctcgc catgctgcat
     2521 catacgctca gcaatgccgg cttcgaggtg ctgcaggccg aggacgggca gaagggcctc
     2581 gacgtgctcg cccgggaaag cgtcgacgtg gtcatcaccg atatcaacat gccggtgatg
     2641 gacggcatcg agttcatcaa gcaggtgcgc gcctcgggcg agcacaacag cctgccgatc
     2701 ctgatcctca ccaccgagac cagccaggac aagcgcgacc agggccggtc ggccggcggc
     2761 acggggtgga tcgtcaagcc gttcgatccg gaaaagctga tctcggtgat ccaccgcgtc
     2821 gtgcattgaa cggggcagcc acccagaagg ggacgcccct cagatgagcg atctcgacga
     2881 cttcaaggcc acctatttcg acgagtgttc cgagctgctg ctcgacctcg aggagcagtt
     2941 cgcggccatc gccggtggag accgcacggc cggccggctg aacgcggtgt tccgcgcgat
     3001 ccattcgatc aagggcggcg ccggcgcatt cggcttcggc gaactggtgg gatttgccca
     3061 tgcctacgag acactgctcg atcatgtgcg cgacgggcgg gtgcagatgt cggagccggt
     3121 cgcggccctg tgcatccggg ccaacgatat cgtcgccgat ttcgtcgggg cggcaaaggc
     3181 cgggacgagc ctgggtgccg gctatggtgc cgacgagcga tcgcagttcg atgcgctgag
     3241 cagcggcgcg ccgctggtgg cgatagacga gggggcggcg gacgagttcg acatcgactt
     3301 cgtgccggtg atggtcaatc tcgagccgcg aggcgagccg ctgacggaca gctttgcgct
     3361 ggcgccgctg gcggtcgagc gcggccactg ggaaatccgc tttgcgccgc acagcgagct
     3421 ctatgcgcgc gccaacgatc cgctgctgct gttccgcgaa ctcgcgagcc tcggcgagct
     3481 gagcgtggtg gcccggctgg gggaaatccc ggcgctcgcc gatttcgagc cgatgggcgt
     3541 ctattgctcg tgggagctga cgctgatttc gccgaccgcg acggccgatt ccatcgccga
     3601 agtgttcgag ttcgtcgagg gcaattgcga cctgctgatc gccgaactgt cgccgcgccg
     3661 cccgaaggcc gcgaagtcgc tggccgagct ggcgatgctg gtcacgccgc catcccgtcc
     3721 cgccgtgatg cctatggcag cgccagcggt cgaggcgccc agtctggccg atctggccga
     3781 cgcgctgaag caggagacac cccggcgcgc cgctgtggca gcggtcgcgg cgtccgcgcc
     3841 cagttcgccg catccggtgg agatcgatcc ggcgcccagc atggcaagcg aggagctcga
     3901 cgaccgccgg gtcggcgaga ccgaccgccg cgggtcgagc gtgcagtcga tccgggtcga
     3961 cctcgacaag gtcgaccggg tggtcaacat ggtaggcgag ctggtcatca cgcaatcgat
     4021 gctgacgcag cagatggacg acacgctgcg ggcccgctac caagagctgg tgcgcggcct
     4081 cgaggtgctg gcgcagacga cgcgcggact gcaggacgcg gtgatggcga tccgggcgca
     4141 gccggtgaag tcggtgttct ctcggatgcc gcggctggtg cgcgagctgg cgcagaagac
     4201 cggcaagaag atccggctcg aaaccgtcgg cgaagccacc gagatcgaca agacggtgat
     4261 cgagcagctc agcgatccgc tgacccacat gatccgcaac tcggcggacc acggcatcga
     4321 gagccccgag aagcgccggg cgctgggcaa gcccgagatc ggcaccattc ggctttcggc
     4381 ggagcaggcc ggtggcaaca tcctcattgc cgtcgaggac gatggcggcg ggatcaaccg
     4441 cgagcgcgtg gtgcaggtgg cgcgggaccg catggtgatc gggccggacc agcagttgag
     4501 cgaggaacag atcgacaatc tgatcttcgc gcccgggttc tcgaccgccg agacggtgag
     4561 cgacatttcc gggcgcggcg tcggcatgga cgtcgtgctc tccaacatca agaagatcgg
     4621 cggctcggtg catgtccgct cgaaggcggg acaggggacg cggatgacgc tgcggctgcc
     4681 gctgacgctg gcggtgctgg acgtgatgct ggtcaaggtc gggccgtcgc cctacgtggt
     4741 gccgctgagc tcgatcgtcg agaccatcca gtgctcgcgc gccgatttcg gacgggctcc
     4801 gtccggggca aaagtgctgc gggtgcgcgg cgagtacgtg caggtggtcg atctggccga
     4861 gcgcttcgag ctgggcggag cggcggagct ggccaaccgc ttcgtggtgc tgtgcgaggc
     4921 tgagggcggc gcgaaggtcg cgctggtggt cgacgacatc atcggccagc aacaggtcgt
     4981 gatcaaaagc ctcgaagaga atttcgaatc gatcgagggc atcgccggcg gcacgatcct
     5041 gggcgacggc aacgtcgcgc tcatcgtcga cgtgcagggc ctcaaggcgc agaagcttca
     5101 caggaacgcc gcctagaacg ggcggcaaag gatcagaaga tggactcgct tgcctacaag
     5161 gacgactacg gtgccctgac gcaggtcaat gcccagaact cgctgcagct catcgccttt
     5221 tcgatcggcg agcagaccta tggcgtcgag atcacgacgg tgcgcgagat ccgggcctgg
     5281 aatggcgcga cgccgctgcc caatacccgc gactatgtgc gcggcgtgat caacctgcgg
     5341 ggcacgatcg tgccgatctt cgacctgcgg gcgcgcttcg gcgaaggcca gacctcgccc
     5401 accaagaacc atgtggtggt ggtgatgtcg gtcggcgaca aatgggtcgg catcctggtc
     5461 gatgcggtga gcgacatcct caccgtcagc aaggacgata tccacaatgt gccggagggc
     5521 aattcgatcg acaccgagct gctcaacggg atcgtcaccc atgaaagccg gatggtgggc
     5581 ctgatcgacc tgcacgcggt ggtgtcgggc gccaaggtcg acgactagcg tcgctgtcgc
     5641 ttcgagatcg gaagaagcaa ggggcgccgc ggcgcccttt gtcattgagc cgcggtgctc
     5701 gcggactcag aacaggtcga cgtcgccccg ggagggcgtc gcggcaatgc cggaaagcgc
     5761 cggaacgcgc agctcgtcga gcacgaggtt ggcccagatt tcgtcgtaga tcgaatccgg
     5821 tgccgtcggc ggcagcaggg cgaactggcg cacggccaaa gccatgttct ggcagcgctg
     5881 ctcgatccgg tcctgtccct gtagcgcgtt gacgatgatg gccatggcct cgcgccgggc
     5941 gtcggcgcag ctcagcgttt tatcgccgag cacctcgagg gcgtaggtga cgccctcgac
     6001 catcgcggcg gtctggcgcg ccgtttcgtc gagctcacgg gcaagtttct gcagcgacat
     6061 ggacagcctg actcccgagc gcgtgtgcag ctataccccg agaagtctga agcgcttctt
     6121 gccggcatgc tgaagtccct atggttgccg aaactggtta gaagttcact aaggtatccc
     6181 gttctattgt gatgacaacc ttgtcagggg catctgcaga gatgacgagc agccgcgcgg
     6241 ctgcgccagc cttcgagcgc ggcgtggtga cgacgatcca tcagggcgac tgcctcgtca
     6301 gcggcgacga ggacctgacc tattcgacga ttctcggctc gtgcgtatcg gcctgcgtcc
     6361 gcgaccgcga ggcggcaatc ggcggcatga accattttct gctggcggag ccgtcgagca
     6421 atgcgcggga ccgctacggc gcctccgcgc ggtacggcgc gttcgcgatg gagcagctga
     6481 tcaacaaggt gctgagccgt ggcacgggcc ggaaggccaa tctcgagatc aaggtgttcg
     6541 gcggcggact gatcacggcg gcgctcaccg atatcggcgc caagaacatc gacttcgtgc
     6601 agcagttcct gaacgacgaa ggctatgtca tcgccggcgg cgacgtgggc ggcaatttcg
     6661 cccgccgggt gatgttcagg ccgcattcgg gccgggcgtt cgtcaagcgg ctcgacagcg
     6721 tcgccggcgc cagcgtcgcc cgcgaggaac tgacgatagt ctcgagccgc cgcatcgcgc
     6781 ggcggccacc ggcggatgac atcgagttgt tctagcggac tgagcagtaa ccgaaatctt
     6841 acccgccgcg ggcgacatat agatttggtt aaccattcgg aatttagggt cgaccagggc
     6901 tcttttacct gtcggtccgg atgcgccgca ccagagttgc gctcatcgtc aatttcgtct
     6961 ggctcgcggc ggcagtcgtg gccgggctgg cgctatggct cggcggcggg cgctggcccg
     7021 gatacgtggc ggcgctgatc gtgctggccg ctgcctttgc gatcgggctc gggctggccg
     7081 ccgccatcga acgccgggtg cagcggaagc ttgcggcgct cggccgggcg gtgggtgccg
     7141 tcgg
//
LOCUS       DATAZA010000539         2789 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2414768, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000539 DATAZA010000000
VERSION     DATAZA010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2789)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2789)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2789
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2414768"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..761)
                     /locus_tag="VHZ56_13275"
     CDS             complement(45..761)
                     /locus_tag="VHZ56_13275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298986.1"
                     /translation="MKITRVVSAAAITVSVAGCATLPDPVPQPPVKLDEIFNAVDCEV
                     VAGLAAHPDLAKAITPWKAGLADLQVSANDSFSSSPGLTWGATATGGAKLSAKWGAGA
                     SNTLKQSADFQHDVPLRSADPKCLPSGSPMASTGLDIANWLASVDALRETSASDKALD
                     ALTYDRTFTVTRTAGGGLSFQIYGVSVGLDTNSIGRSDIYELTLAIKKPEAKKANPEE
                     HARLETQIYTERLTPPPAAF"
     gene            1099..1368
                     /locus_tag="VHZ56_13280"
     CDS             1099..1368
                     /locus_tag="VHZ56_13280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020086205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase"
                     /protein_id="HEX4298987.1"
                     /translation="MSPLLIVLLVLVIGIVVGVGALRMRRASWLTRQVAGGRRAEVTS
                     ALVGIAGAFIGFHIAALAEADTIILLIAALIGAVLVVWGWREIRF"
     gene            complement(1399..2640)
                     /locus_tag="VHZ56_13285"
     CDS             complement(1399..2640)
                     /locus_tag="VHZ56_13285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008525741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6596 domain-containing protein"
                     /protein_id="HEX4298988.1"
                     /translation="MTEAGEAGRAAERVARESYGRLVAFLAARTRDVAGAEDALSEAF
                     AAALRMWPLDGVPHNPDAWLLTVARRRQTDAARRRRTRAAGKEHVMLIADELEAATAE
                     AGAIPDRRLALMFACAHPAIDKGMRAPLILQAVLGLTAEDISAAFLIPAATMGQRLVR
                     AKTRIRDAGIPFRVPDREELAGRLEAVLDAIYAAYAKGWAEIGDAATPALADEAIWLG
                     RLIVSLLPDEPEARGMLALMLFAEARRPARRSVTGAYVPLEQQDTSLWDDSQIVLAER
                     LLREASAGGPSGRYQIEAAIQSAHIARRVTGAPNWAAVVTLYGHLYSLTRSPVVTLNR
                     AVALAELDGPDAALDSIAALAADKRMLSYQPYWAARGHLLARAGRKAEASEALTLAVG
                     LATDDAVRAYLRQQLAALQDA"
BASE COUNT          412 a          872 c         1047 g          458 t
ORIGIN      
        1 tgggcgctgc ctatagggga aaggcgcccg ccgggcaagg ggagctagaa cgcggccggc
       61 ggaggcgtca gccgttccgt gtagatttgc gtctcgaggc gcgcatgttc ctccgggttc
      121 gccttcttgg cctccggctt cttgattgcg agagtcagtt cgtaaatgtc gctgcggccg
      181 atgctgttgg tatccagacc gacggacacg ccgtaaatct ggaagctcaa tcctcccccc
      241 gccgtccgcg taacggtgaa ggtccgatca tatgtcaacg catccaaggc cttgtcgctg
      301 gccgaggtct cgcggagcgc atcgacgctc gccagccagt tggcgatatc cagcccggta
      361 gatgccatgg gcgacccact cggcagacat ttggggtctg cggatcgcag aggcacgtca
      421 tgctggaaat ccgcgctctg cttcagggta tttgacgcgc cggcgcccca tttcgccgaa
      481 agcttggcgc cgccggttgc cgtggccccc cacgtcagcc ccggcgacga ggagaacgag
      541 tcattggcgc tgacctggag gtcggccagc ccggctttcc agggtgtgat tgccttggct
      601 aggtccggat gcgcagccaa cccggccacc acctcgcagt cgaccgcatt gaatatctca
      661 tcgagcttga ccggtggctg cgggaccgga tcgggaaggg tggcacaccc ggccaccgat
      721 actgtaatcg ccgcagcgct cacgacacga gtgatcttca tggccgagcc cccgctgcca
      781 atgaaatact tatgttaact gttattaacc atatcggcgg cgaggagcga agtaaatcgg
      841 cttggaataa gtagaaaccg aggagctaca tcgtcgccgg cacgtagcct ttcgggggtt
      901 ccatcgtcag gccgatgagg tggccgtcgg ggtcgcgggt gaaggccagc cgcagctcgt
      961 ggtcgggcat cgggccgtgc gatgggggtc aacgattgcg ttgtgcgggg tttcgatgaa
     1021 agcctgacgg agacgggggc ggtcgcgatt ctggcggctc cggatcgtca aatctgaacg
     1081 ggtggaggaa tttcgcgcat gagtccgctt ctcatcgtcc tgctggtcct ggtgatcggc
     1141 atcgtggtcg gcgtcggggc cctcaggatg cggcgcgcat cgtggctgac gcggcaggtc
     1201 gccggcggcc ggcgggccga ggtcaccagc gcgctggtcg ggatcgccgg cgccttcatt
     1261 ggcttccaca tcgccgcgct ggcggaggcc gacacgatca tcctgctgat cgccgcactg
     1321 atcggggcgg tgctcgtcgt ctggggctgg cgcgaaatcc gtttctaggc cggtgggcga
     1381 ccgcagcgcc ggcgcgcgct aggcgtcctg cagggcagcg agctgctgcc gcagataggc
     1441 gcggacggcg tcgtcggtgg cgaggccgac ggcgagggtc agggcttcgc tcgcctccgc
     1501 cttgcggccg gcgcgggcga ggagatggcc gcgcgccgcc cagtagggct ggtagctcag
     1561 catgcgcttg tcggcggcga gcgcggcgat ggagtcgagg gcggcgtcgg ggccgtcgag
     1621 ctcggccagc gccacggcac gattaagggt gacgacgggc gagcgggtga ggctgtagag
     1681 gtggccgtag agagtgacga cggcggccca gttgggggcg ccggtgacac gccgcgcgat
     1741 gtgggccgac tggatggccg cctcgatctg gtagcggccg ctcgggccgc cggcgctggc
     1801 ctcgcgcagc agccgttcgg cgaggacgat ctgcgagtcg tcccagaggc ttgtgtcctg
     1861 ctgctcgagc ggcacatacg caccggtgac gctgcggcgg gcggggcggc gggcttcggc
     1921 aaacagcatc agggccagca tgcccctggc ttcgggctca tccggcagca gcgagacgat
     1981 gagccggccg agccagatcg cctcgtcggc gagcgccggc gtggcggcgt cgccgatctc
     2041 ggcccagccc ttggcgtagg cggcgtagat cgcatcgagc accgcctcga gccggcccgc
     2101 cagttcctcg cggtcgggga cgcggaaggg gatgccggca tcgcggatgc gggtcttggc
     2161 gcggacgagg cgctggccca tggtcgcggc cgggatgaga aacgctgccg aaatgtcctc
     2221 ggcggtgagg ccgagcaccg cctgcaggat cagcggcgcg cgcatgccct tgtcgatggc
     2281 ggggtgggcg caggcgaaca tcagcgccaa acgccggtcg ggtatggctc cggcctcggc
     2341 ggtggcggcc tcgagctcgt cggcgatcag catgacatgc tcctttccgg cggcgcgggt
     2401 gcggcgccgg cgcgccgcgt cggtctgccg tcggcgggcg acggtgagca gccaggcatc
     2461 cgggttgtgc ggcacgccat cgagcggcca catgcgcagg gcggcggcaa aggcttcgga
     2521 cagggcgtcc tcggcgcccg ccacgtcgcg ggtgcgggcg gcaaggaagg cgacgaggcg
     2581 gccgtagctt tcgcgcgcga cgcgctcggc agcacgaccg gcctcgccgg cttcggtcat
     2641 ttccggttcg cctgggcttc gacgacgggg cggatctcga tcgagccgta gcggctcgac
     2701 gggcaccgct tggcccacgc gatcgcctcg tcgagatcgg cgacggtgac gaagaaatag
     2761 ccggcgaact gctccttggt gtcggcgta
//
LOCUS       DATAZA010000540         4379 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_324752, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000540 DATAZA010000000
VERSION     DATAZA010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4379
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_324752"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..471)
                     /locus_tag="VHZ56_13290"
     CDS             complement(<1..471)
                     /locus_tag="VHZ56_13290"
                     /inference="COORDINATES: protein motif:HMM:NF014808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M17 family peptidase N-terminal
                     domain-containing protein"
                     /protein_id="HEX4298989.1"
                     /translation="MPQTITIHTAPLPLVPAGILVLYVAEGAAPRGPSGAAWDATGLD
                     FAEIAAAAGFKGTQGQLLDIAAPRGVDARRLFVLGAGRIDPDHPATAAAWTDRGGSLA
                     AKLMAANAETVSVLLDGHEAMPAAVAELAAGLRLRHYRFDKYKSAKPDDATPSAL"
     gene            654..1745
                     /locus_tag="VHZ56_13295"
     CDS             654..1745
                     /locus_tag="VHZ56_13295"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEX4298990.1"
                     /translation="MARLSRYLLKLFVSEAMALFVIAAFLLFLIQCLRLFDIVENKGQ
                     SLLTLLGQAALGMPGLGIVFLYVCLGIGLGRALRNLQGSSELQIIHVSRLLPALLQAV
                     GVYTVGGALAVLLLAHIVDPVSVRATNDWSASIAADLVSRSMIPHQFTQLVDGVSMVI
                     GSRDAEGNITDFFADDSRDPKVHRTYFAKTALIIRDPQGFVLRMQNGAVQSMNPTQQF
                     SQVSFSRYDLALDNLTGSTADTDPLAQTSSLDLLATGLSTGQWDPDAVKTLAKRSGEA
                     LRVIAMCVFVTGLAAFPSGRRARFEVPLEFAVLGMAFLERAITSYAPGPSLVGVAFGS
                     ILLLGYGIVVLAWRLRLFRRVPRLRRQPA"
     gene            1742..2788
                     /locus_tag="VHZ56_13300"
     CDS             1742..2788
                     /locus_tag="VHZ56_13300"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEX4298991.1"
                     /translation="MTRIDWIVLRRLGGRIGLTIAVFFGLLALVESLDTYRFHALSSI
                     GGPQLAVAAIISNAARNVVGTLEVTVLIGTIIGVLDLQARREMTVIKATGTSIWRILM
                     APLVAAILLGLFAGLVADTLAINFNRTLPVSGTHAGGLWLEQQGRDGPYVLAAQHSRS
                     GGSVLDGVTIYFTTGDHDRIEADSAAIGNGEWVLTNAVRYDSQRPAEALTGYKVATTT
                     TAGDMQVRLTSVRDLTFGELLSAVAERVEDPKLRIAALTSLLRLAAQPAMLGGSVLIG
                     FAFTSGYRRTNKYGGTVLYGIVLGFVVYVVTELANRSGFAGVLDPALAAAGPALVAIV
                     IGLTVLLYREDGRA"
     gene            2788..>4379
                     /gene="lptD"
                     /locus_tag="VHZ56_13305"
     CDS             2788..>4379
                     /gene="lptD"
                     /locus_tag="VHZ56_13305"
                     /inference="COORDINATES: protein motif:HMM:NF016348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0010033 - response to organic substance
                     [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HEX4298992.1"
                     /translation="MAAAPGTRTELLPRRLIRGLAGFAIALALAGPAEASLLPAGFFD
                     MDVKPGQGSAAVEADRMTDDAKAHLIIAEGNATVSYGGSVIKADRIEYDQNTGGVHAI
                     GHVVLRDHAGDIYQMNEVTVTGGMKQAFINSLTLTTHEGSLITADNVNYSSELQTILT
                     DATYSPCGLCIDSKGRHIGWQVKAARMVYDRKSASITMDQPSLAVLGIPVAWLPWFWL
                     PDPTQPRAAGIRLPSVDYDPKRGAIATLPYFQPIGPDIDMLLSPTLMSRQGFLGKVRL
                     DWRLPDYGEVDVRASGIDQLTPSAYAGTVGDRSWRGAIQTSGSFKPLKDWTAGWSYSA
                     FSDGDYLYDYEMDDSESSTNDVHVTYLHQQTWFDARIETFNRLGTDLTAATDNDNQQA
                     VVLPKVSADHVQDLAPGWGRVHVTAEALGVDRGDDDESTFNGVPYDFGYAGAKQHAMV
                     QGNWENQWILPGGVTAVPYVGMRLDAAEYDGASTLPSAPPATFLLSATPIAAMDVRWP
                     LMAVNGSDTHLLEPIAQLVYRGS"
BASE COUNT          678 a         1435 c         1549 g          717 t
ORIGIN      
        1 cagcgccgat ggcgtcgcat cgtcgggctt ggcgcttttg tatttgtcga agcggtagtg
       61 gcggaggcgc aggcccgcgg ccagttcggc aacagcggcc ggcatggcct catggccgtc
      121 gagcagaacg gagacggttt cggcgttggc agccatcagc ttggcggcga gcgagccacc
      181 gcggtcggtc caggcggcgg cggtggcggg atgatcgggg tcgatgcggc cggcgccgag
      241 cacgaacagc cggcgggcgt cgacgccgcg gggcgcggcg atgtccagca actggccctg
      301 cgtgcccttg aagccggcgg cggcggcgat ctcggcaaaa tcgaggccag tggcgtccca
      361 ggccgcgccg gacgggccgc gcggcgcagc gccttcggcg acatagagga cgaggatgcc
      421 ggccggaacg agcggcagcg gggcggtatg gatggtgatc gtctggggca tggccgcgtc
      481 tggctggagg gacgatcagg caatcccggt tcggccggcg cgtcaatccc gcaacacccc
      541 ggcgacgatc ggaggcccgc ggcgggctgc cttgccatcg ccaccgaagc gccccagagt
      601 cccgcccgca tagaacaggg gcggcacatt tcgagtcttg cgcaggacgc cagatggcgc
      661 gcctaagtcg ctatctgctc aagcttttcg tctcggaggc gatggcgctg ttcgtcatcg
      721 ccgcattcct gctgttcctc atccagtgcc tgcggctgtt cgatatcgtc gagaacaagg
      781 ggcagagcct gctcaccctg ctcgggcagg cggcgctggg catgccgggc ctggggatcg
      841 tgttcctcta tgtctgcctc ggcatcgggc tcggccgcgc gctgcgcaac ctgcagggct
      901 cgagcgagct gcagatcatc cacgtcagcc ggctgctgcc ggcgctgctg caggcggtcg
      961 gcgtgtacac ggtcggcggg gcgctggcgg tgctgctgct ggcccacatc gtcgatccgg
     1021 tgagcgtgcg ggcgaccaat gactggtcgg cgagcatcgc ggccgacctc gtgtcgcgca
     1081 gcatgatccc gcatcagttc acacagctgg tggacggggt gtcgatggtg atcgggtcgc
     1141 gcgacgccga gggcaacatc accgacttct tcgccgacga cagccgcgac cccaaggtgc
     1201 accggacgta tttcgccaag accgcgctga tcatccgcga cccgcagggc ttcgtgctgc
     1261 gcatgcagaa cggcgccgtg cagtcgatga accccaccca gcagttctcg caggtgagct
     1321 tttcccgcta cgacctggcg ctggacaatc tgaccggctc gaccgccgac accgacccgc
     1381 tggcgcagac ctcgagcctc gacctgctgg cgaccgggct cagtaccgga caatgggacc
     1441 ccgacgcggt caagacgctg gccaagcgca gcggcgaggc gctgcgggtc attgcgatgt
     1501 gcgtcttcgt caccgggctc gcggcattcc ccagcgggcg gcgcgccagg ttcgaggtgc
     1561 cgctcgagtt cgcggtgctg gggatggcgt tcctcgagcg ggcgatcacc tcctacgccc
     1621 caggaccgag cctcgtcggc gtggccttcg gttcgatcct gctgctgggc tacggcatcg
     1681 tggtgctggc ctggcgactg cggctgttcc gccgggtgcc gcgattgcgg aggcagccgg
     1741 catgacgcgg atcgactgga tcgtgctgcg gcggctgggc gggcggatcg ggctcacgat
     1801 cgcggtgttc ttcggcctgc tggcgctggt cgagtcgctc gacacctacc ggttccacgc
     1861 cctgagcagc atcggcgggc cgcagctggc ggtggcggca atcatttcca acgcggcgcg
     1921 caacgtcgtg ggaacgctgg aggtgacggt gctgatcggc accatcatcg gcgtgctcga
     1981 cctgcaggcg cgccgcgaga tgacggtgat caaggccacc ggcacctcga tctggcggat
     2041 cctcatggcg ccgctcgtcg ccgccatcct gctcgggctg ttcgccggcc tcgtcgccga
     2101 cacgctggcg atcaatttca accgcacgct gccggtttcc gggacgcatg cggggggtct
     2161 gtggctcgag cagcagggcc gcgacgggcc gtatgtgctc gcggcgcagc attcccgcag
     2221 cggcggctcg gtgctcgacg gcgtgacgat ctacttcacg accggcgacc acgaccggat
     2281 cgaggccgat tcggcggcga tcgggaatgg ggaatgggtg ctgaccaatg ccgtgcgcta
     2341 cgattcgcag cggccggcgg aggcgctgac gggctacaag gtggcgacga ccaccaccgc
     2401 aggcgacatg caggtgcggc tgacctcggt gcgcgacctg acgttcgggg agctcctgag
     2461 cgcagtggcc gagcgcgtcg aggatccgaa gctgcgcatt gcggcgctga cgagcctgct
     2521 gcggctggcg gcgcagccag ccatgctggg cggttccgtg ctcatcgggt ttgcatttac
     2581 ttcaggttat cgaaggacaa ataagtatgg cgggacggtc ctttatggca tcgttcttgg
     2641 ttttgtggtt tacgtggtga ccgaattggc gaaccgttcc ggcttcgctg gtgtcctcga
     2701 tcccgcattg gccgccgcag ggccggctct tgtggcaatc gtcattgggc tgacagtgct
     2761 gctctacaga gaagacgggc gagcgtgatg gctgcagccc cgggcacccg taccgagttg
     2821 ctgccgcggc gcctgatccg cgggctcgcg ggattcgcga ttgccctggc gctcgccggc
     2881 ccggccgagg cgagcctgtt gccggcaggc tttttcgaca tggacgtcaa gcccggccag
     2941 ggctcggccg cggtcgaggc cgaccggatg acggacgatg ccaaggccca tttgatcatc
     3001 gccgagggca acgccaccgt ttcgtacggc ggctccgtca tcaaggccga ccggatcgaa
     3061 tacgaccaga acaccggcgg cgtgcatgcc atcggccacg tggtgctgcg cgaccatgcc
     3121 ggcgacatct accagatgaa cgaagtgacc gtgaccggcg gcatgaaaca ggcgttcatc
     3181 aattcgctga cgctgaccac ccacgaaggg tcgctgatca ccgcagacaa cgtcaactac
     3241 tcgtccgagc tgcagacgat actgaccgac gcgacctatt cgccatgcgg gctgtgcatc
     3301 gacagcaagg gccgccacat cggctggcag gtgaaggcgg cgcgcatggt ctatgaccgc
     3361 aagagcgcct cgatcacgat ggaccagccg tcgctcgccg tgctgggcat tccggtggca
     3421 tggctgccgt ggttctggct gccggatccg acgcagccac gggccgcggg aatccgcctg
     3481 ccgtcggtcg actacgatcc gaagcgcggc gccatcgcca ccctgccgta tttccagccg
     3541 atcggtccgg acatcgacat gctgctgtcg ccgacgctga tgtcgcggca gggctttctc
     3601 ggcaaggtca ggctcgactg gcgcctgccg gactatggcg aagtggacgt ccgcgcctcc
     3661 ggcatcgacc agctcacccc gtcggcctat gccgggacgg tgggcgaccg cagctggcgc
     3721 ggcgcgatcc agacgagcgg cagcttcaag ccgctgaagg actggaccgc cggctggtcc
     3781 tactcggcgt tcagcgacgg cgactatctc tacgactacg agatggacga ttccgagagc
     3841 tcgaccaacg acgtgcacgt gacctacctg caccagcaga catggttcga cgcgcgcatc
     3901 gagaccttca accggctggg caccgacctg acggcggcga ccgacaacga caaccagcag
     3961 gccgtcgtgc tgccgaaggt gtcggcggac cacgtgcagg acctggcgcc cggctggggc
     4021 cgggtgcacg tcaccgcgga agcgctgggc gtcgaccgcg gcgatgacga cgagagcacg
     4081 ttcaatggcg tgccgtacga tttcggctat gccggcgcca agcagcacgc gatggtgcag
     4141 ggcaactggg agaaccagtg gatcctgccc ggcggagtga ctgccgtccc ctatgtgggc
     4201 atgcggctcg atgcggcgga gtacgacggc gccagcaccc tgccctcggc gcccccggcg
     4261 acgttcctgc tgagcgcgac gccgatcgcg gcgatggatg tgcgctggcc gctgatggcg
     4321 gtcaacggct cggacacgca cctgctcgag ccgatcgcgc agctggtcta tcgcggctc
//
LOCUS       DATAZA010000541         9916 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3344821, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000541 DATAZA010000000
VERSION     DATAZA010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 9916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9916
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3344821"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..609
                     /locus_tag="VHZ56_13310"
     CDS             <1..609
                     /locus_tag="VHZ56_13310"
                     /inference="COORDINATES: protein motif:HMM:NF018053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1045 domain-containing protein"
                     /protein_id="HEX4298993.1"
                     /translation="RESLLGRAAEKWLDQTELAPATVSARRYGFHATLKAPMGLATGC
                     DRAGVEARLGQFAQAHAAVSLGELAPRVLDGFIALTAEPQPQAVTDFATEVVEEFEPY
                     RAPLTAAERERRLAAPLTPRQVELVDGYGYPYVLEEFLFHMTLTDRLADADRGRVLER
                     ATEWFAPALAEPIALDRLVLFHEAEAGAAFRRLGDHVLEGSR"
     gene            606..1745
                     /locus_tag="VHZ56_13315"
     CDS             606..1745
                     /locus_tag="VHZ56_13315"
                     /EC_number="3.6.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007197970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0019700 - organic phosphonate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate diphosphatase"
                     /protein_id="HEX4298994.1"
                     /translation="MSETVFRNARLVLADEVVEGSLRIADGRIAAIDGGPSQAGEDFE
                     GDYLIPGLVELHTDHLENHYRPRPGVFWNPLGALMAHDVQIAGSGITTVFDAVRIGSD
                     PETPGGMSEHVQVLVDAIATGVADGRLRADHLIHLRCELPAPDVVDDFERFADLPLVR
                     LASVMDHTPGQRQYQTVAKYREYYMERMRLTPAEMDAFIAARHEEQARYSDKHRKAIL
                     KRGLAAGIAFASHDDATPEHVSESVADGVSIAEFPTTMVAAEASHAAGLAVLMGAPNV
                     VRGGSHSGNIAAADLAREGCLDVLSSDYVPGALIHAAFQLPEIAGNISLPAAIRMVSA
                     TPAQAAHLDDRGEIAPGMRADLVRVRLHGDMPVVKGVWRQGRRVS"
     gene            1745..2299
                     /gene="phnN"
                     /locus_tag="VHZ56_13320"
     CDS             1745..2299
                     /gene="phnN"
                     /locus_tag="VHZ56_13320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004685664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism
                     protein/1,5-bisphosphokinase (PRPP-forming) PhnN"
                     /protein_id="HEX4298995.1"
                     /translation="MAHKGVLVLVVGPSGAGKDTLIGAAKAALADDRRFVFPRRVVTR
                     QAVTELEDHDSVNEEDFEREAAAGAFALSWSAHGLRYGLPRSIATDVEAGRVVVCNGS
                     RAMVAEARRSIPQTRVVLVEAAPEVRAQRLGARGRESAGEIAARLGREVAQPMADAIR
                     VDNSGPLAAGVASFLAALAALAEN"
     gene            2361..2609
                     /locus_tag="VHZ56_13325"
     CDS             2361..2609
                     /locus_tag="VHZ56_13325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298996.1"
                     /translation="MREMTDMEADVHETTVIEALLRELAEQGQGGVPGAPPERLKAYP
                     IKGTIDVVALAEAVENALRGMSSDAGKSPAELNAANDG"
     gene            2704..3030
                     /locus_tag="VHZ56_13330"
     CDS             2704..3030
                     /locus_tag="VHZ56_13330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298997.1"
                     /translation="MNRNTWIIIIVAVIVIIGLIWIFNRGTPAPAPVAVTPSSVEAPA
                     SSDTMAPASSDTMAPASSATPMAPASSDTMAPASSDTMAPASSATPMAPASSDTMAPA
                     SSSSAG"
     gene            complement(3106..3321)
                     /locus_tag="VHZ56_13335"
     CDS             complement(3106..3321)
                     /locus_tag="VHZ56_13335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4298998.1"
                     /translation="MQHQTVPPQPAPRPVAIEIDGEPLGVVIPAAEGYRFLAVRFSAF
                     PLDGRTFETVEAAREALGEAVHTDLGP"
     gene            3959..5002
                     /locus_tag="VHZ56_13340"
     CDS             3959..5002
                     /locus_tag="VHZ56_13340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017968017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family transcriptional regulator"
                     /protein_id="HEX4298999.1"
                     /translation="MSEPEPRLKPRSKRGGPRSDKPTLRTIAEMTGLAITTISRALNN
                     APELSRETRERVQKIAAEIGYVPDRTALRLKTGRTHVISLILDPHDEIINFSQSLVSG
                     ISAALGGTPYHLVITPSFRGASPLDPINYVLRNRMADGVIFSRTEPGDARVKLLLDSN
                     FPFVTHGRTDLGAAHPYVDYDNFAFAYAAAMRLHSKGRRHLSMISVNPRFTFGRHLRD
                     GLIKAANETGISYELETGVTLDDNPEDIRVATMRRIAQGKAPDGYICPGDAVALAVIA
                     GIVDSGRQVGRDADIVTKQMSGIFSLVRPKVDVISEDIALAGRQLGELLLKRIAGQPL
                     DSLQILQLPEIMF"
     gene            complement(4999..6822)
                     /locus_tag="VHZ56_13345"
     CDS             complement(4999..6822)
                     /locus_tag="VHZ56_13345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003612414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4299000.1"
                     /translation="MPAAPILALQAIRLTLGSTLLLDGAELSVLPGDKVALVGRNGSG
                     KSTLLRIAAGAIEADGGERFLQPGATIRYLPQEPDLSGFATTLDYAAAGLEAGNDPHR
                     ARYLLEHLGLTGAEDPARLSGGEARRAALARVLAPEPDILLLDEPTNHLDLPAIEWLE
                     AELKGLRSALVIVSHDRRFLSDLTRATVWLDRGTTRRLNRGFGAFESWRDTVLEEEEL
                     ARHKLDRQIVREEHWLTYGVTARRKRNVRRLERLSSLRQDRREQRRAVGDVKLQVAGA
                     DLSGRLVVDAERVAKSFGDRVIVDEFTTRIIRGDRVGIVGANGAGKTTLIKLLTGEIA
                     PDSGRVRLGSNIELATLDQRRARLDPTATLKEALTTGGSDTLVINGQPKHVMGYMKDF
                     LFGPEQARTPVAKLSGGERGRLALARILALPSNVIVLDEPTNDLDLETLDLLEEMLGD
                     YPGTVIVVSHDRDFLDRVATSIVVAEGEGRWTEYAGGYSDMVAQRGYGVTKPEAPRAA
                     RGGRSQPMPAIAASAGKAKLSFKHKHALETLPAEIARLAAEIARLNARLADAGLYARD
                     PRAFADATAKLTAAETARSAAEDQWLELEALREALEGPPAA"
     gene            complement(6856..8520)
                     /locus_tag="VHZ56_13350"
     CDS             complement(6856..8520)
                     /locus_tag="VHZ56_13350"
                     /inference="COORDINATES: protein motif:HMM:NF039722.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6311 domain-containing protein"
                     /protein_id="HEX4299001.1"
                     /translation="MPDRLRDLLGGLAAMALGIAAFFVFAGWWVLIPTNIAFLDVGDR
                     AMHTLGWMFFRDAPWGTPPGASPRLGIELANSIALVDGLPLFAIPFKLLSPWLPRPFQ
                     YWGYWWLLSFTLQALFGYLVARQMGGRRLVALLAAGFVVITPAFLFRTTLHMALSGHW
                     TILAAMYLYARRTPPRLYAWPLLAGLTASIHAYLLAMVLGLWLAAWVQRLWTRRIGWR
                     HAILEPVLIALVAVLVLWLVGFFYTGSLGSYGFGSYRLNLFWPFLTYRDWSQLVPDLP
                     HAKYDYEGLSFLGIGILAILVLSIFSGAVAKLRVLVTARWLPLLLMALLLMVCALSNH
                     IGVLGIELPAIPIGDRLEALGGIFRSSGRFVWPILYLVTIGAVVLLGRRFSPAWAVLV
                     MTACLAAQIVDSQPGWSQFRTYAPPPSAQWSTDLKSGFWQRAADAGYTAVRAIPAAYK
                     GLDWRQLEYYAVLHHMAVDSVYLGRVDQAALDALNASDDQAMDTGNFEPRTIYVLDAD
                     AADRIKDHATSDDLLAVVDNRYVFVPGGARLAAGLDDVTPLPLLGD"
     gene            complement(8585..>9916)
                     /locus_tag="VHZ56_13355"
     CDS             complement(8585..>9916)
                     /locus_tag="VHZ56_13355"
                     /inference="COORDINATES: protein motif:HMM:NF039722.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6311 domain-containing protein"
                     /protein_id="HEX4299002.1"
                     /translation="SLFAWRLARALGARSGLALVASGFALVAPVYLFRFPMHLALSGQ
                     WTLLLALWLYARPLPPRRWMWPLVACLVAMIHAYLLAMVLAIWVADLARRRWAGSLGW
                     SGVAAEIAVVLVPTALVLWAVGFFMTGSLGIGGYGVYRLNLLGFVIPFDWSRLVPPIP
                     AGRGDYEGMAFLGIGVLALLLVAIASGALPRLRRLGSHRWLPLLVVVVLMFGYALSDH
                     IAIGGRELFTVPLPSVFRHFAADFRSSGRFVWPAVYLLTVGAVVALGWRLRPALAVGI
                     AVVALAAQFVDAAPSELRFHKTLPAPSAVWSTPLASPFWDRAAAAGFTRLRAIPYEAI
                     FGDWRALSYFAVTHGMATDAAYLGRTDGRAEHALAAREAGELATGTLEAGTLYEVGHA
                     ATLATAARLRPGDLLAWIDGRFIFARDGAALLDGLNIWARYGAQPPAAAAH"
BASE COUNT         1667 a         3048 c         3848 g         1353 t
ORIGIN      
        1 cgggagtccc tgctgggccg cgcggcagag aagtggctgg atcaaacaga gctggcgccg
       61 gcgacggtgt cggcgcggcg ctatggcttc catgcgacgc tgaaggcgcc gatggggctg
      121 gcaaccggct gcgaccgggc cggcgtcgag gcccggctgg ggcagttcgc gcaggcgcat
      181 gcggcggtgt cgctgggcga gctggcgccg cgggtgctgg acgggttcat cgcgctcacg
      241 gccgagccgc agccgcaggc ggtgacggat ttcgcgacgg aggtggtgga ggagttcgag
      301 ccgtaccggg cgccgctgac ggcggccgag cgggagcggc ggctggcggc gccgctgacg
      361 ccgcggcagg tcgagctggt cgatggctat gggtatccgt acgtgctgga ggagttcctg
      421 ttccacatga cgctgaccga tcggctggct gacgccgacc ggggacgggt gctcgagcgg
      481 gcaaccgagt ggttcgcccc ggcgctggcg gagccgatcg cgcttgaccg gctggtgctt
      541 ttccatgaag cggaagcggg cgcggcgttc cgccggctcg gcgatcatgt gctcgagggg
      601 agccgatgag cgagacggtg ttccgcaatg cccggctggt gctcgccgac gaggtggtcg
      661 agggcagcct gcggattgcc gacggacgga tcgcggcgat cgacggcggc ccgtcgcagg
      721 cgggcgagga tttcgagggc gactacctga ttccggggct ggtcgagctc cacaccgacc
      781 atctcgagaa ccattaccgg ccgcggccgg gggtgttctg gaatccgctc ggggcgctga
      841 tggcgcacga cgtgcagatc gccggatcgg ggatcaccac ggtgttcgac gcggtgcgga
      901 tcggttccga tcccgagacg cccggcggca tgagcgagca cgtgcaggtg ctggtcgacg
      961 ccatcgcgac cggcgtcgcg gacgggcggc tgcgggccga ccacctgatc catttgcgct
     1021 gcgaattgcc ggcgcccgac gtggtcgacg atttcgagcg cttcgccgac ctgccgctgg
     1081 tgcggctggc gtcggtgatg gaccacacgc cggggcagcg gcagtaccag accgtcgcca
     1141 agtaccgcga atactacatg gagcggatgc ggctgacgcc ggcggagatg gacgcgttca
     1201 tcgcggcgcg gcacgaggaa caggcgcgct attcggacaa gcatcgcaag gccatcctca
     1261 agcgcgggct ggccgcagga atcgcgttcg cgagccatga cgacgcgacg ccggagcatg
     1321 tgtcggagtc ggtggcggac ggcgtcagca tcgcggaatt cccgacgacg atggtggcgg
     1381 ccgaggcctc gcacgcggcc gggctcgcgg tgctgatggg ggcgccgaac gtggtgcggg
     1441 gcggctcgca ttcgggcaac atcgcggcgg ccgacctggc gcgcgagggg tgcctcgacg
     1501 tgctgagctc ggactatgtc ccgggggcgc tgatccacgc ggcgttccaa ctgccggaga
     1561 ttgccggcaa tatcagcctg ccggcggcga tccggatggt gtcggcgacc ccggcgcagg
     1621 cggcacacct cgacgaccgg ggcgagatcg cgccgggcat gcgggccgat ctggtgcggg
     1681 tgcggctcca cggcgacatg ccggtggtca agggcgtgtg gcggcagggc cggcgggtca
     1741 gctgatggcg cacaaggggg tgctggtgct cgtcgtcggg ccctcggggg ccggcaagga
     1801 cacgctgatc ggcgctgcaa aggcggcatt ggcggacgat cggcgtttcg tgtttccgcg
     1861 ccgggtggtg acgcggcagg cggtcaccga gctcgaagat cacgactccg tgaacgagga
     1921 ggacttcgag cgggaggccg cggccggggc gtttgcgctg agctggagcg cgcacgggct
     1981 gcgttatggg ctgccgcgca gcatcgcgac ggacgtcgag gcaggccggg tggtggtctg
     2041 caatggttcg cgggcgatgg tggcggaggc gcggcggagc atcccgcaga cgcgggtggt
     2101 gctggtcgag gcggcaccgg aggtgcgcgc gcaacggctg ggggcgcgtg gccgcgagag
     2161 cgccggcgaa atcgcggcgc ggctcgggcg ggaggtggcg caaccgatgg ccgacgcgat
     2221 ccgggtggac aattccgggc cgctggcggc aggagtcgcg agcttcctcg cggcgctcgc
     2281 ggcactggcg gaaaattgaa ccttatccgg gaaacgacgt tcctgtcgcg ggtgcgaggg
     2341 gcgatgcaaa caagggtcaa atgcgagaaa tgaccgatat ggaagcggac gttcacgaga
     2401 ccacggtgat cgaagcgttg ctgcgcgagc ttgcggaaca aggccagggc ggagtgccgg
     2461 gagctcctcc ggagcggctc aaggcctatc caatcaaggg gacgatcgac gtggtagccc
     2521 ttgccgaggc ggtggaaaat gcgctacgcg gcatgtcctc cgatgccgga aaatcgccgg
     2581 ccgaattaaa tgccgccaat gacggatgaa acgatactgg ctgttgaatt cagggaagcg
     2641 gccaagcgtc tggcatgatc gactaatctt cccggtccac tcaaacaaac aagggtccta
     2701 cccatgaatc gcaacacctg gattatcatc atcgtggccg tgatcgtcat catcggcctg
     2761 atctggatct tcaatcgcgg cacgccggcc ccggctccgg tcgcggtgac gccgagctcg
     2821 gtcgaggcac cggcttcgtc cgatacgatg gctccggctt cgtcggacac gatggcgccc
     2881 gcctcgtcgg ccactccgat ggctccggct tcgtcggaca cgatggcccc ggcctcgtcc
     2941 gatacgatgg cgcccgcctc gtctgccacg ccgatggctc cggcctcgtc cgacacgatg
     3001 gcgccggcct cgtcctcgtc cgccggctga tcgaccgaca gtacaatgcg acccccgcca
     3061 gcgatggcgg gggttttttg ttgtcccgga ggcgagaaag cggagctacg ggccgaggtc
     3121 ggtgtggacc gcctcgccca gggcctcgcg cgcggcctcg acggtctcga aggtgcggcc
     3181 gtcgagcggg aaggcgctga agcgcacggc gaggaagcga tagccctcgg cggccgggat
     3241 caccacgccg agcggctcgc cgtcgatctc gatggcgacg ggacgcgggg caggctgcgg
     3301 gggaacggtc tggtgctgca tggaacatgc ctccaacggc gccgaagggc ggcgacttgg
     3361 gtgatacggg aactgtgaga cgcgggcgtg acgggccgga cggccagggt cacattcgcc
     3421 agtttcggag acaccgtttg gaggctacgc gtttggtggc agtccgggtg cgggcagcga
     3481 tcaaagcaag gcggatcatt ctttgtccct ttccggtgtg ggaccgaagc cccggcgcca
     3541 aacactgacc tgcagatagg caccaaggcc ctgcccgcaa gccgctcgct ggcgaaataa
     3601 atcgccatgg ccagtgatgg tccgtttcgt gcgccgcggc aagccagact ttggtgggcc
     3661 ggcgggcgaa gcgatcaaaa caagttgcga cggtcgggag gacgacgcgc ccggcccggc
     3721 gacggggtga tttctggctg ccgaagatgc atcgcggctt cgaaaacccc gcccggtcgg
     3781 ggcagcccgg taagaatatg aaattgcata agactttcgg ccaattgcgc gaaggaccga
     3841 tcggtcttga aatcgattgc acgatctgtt gagttagcag cgcgatgtca catgccacag
     3901 gggccgcaga gccgccgtgg ggccgggagg acggtcggat gttgcgaggg aggcagaggt
     3961 gtccgaaccg gagccgcggc tgaagccgcg gagcaagcgt ggcggaccgc gatccgacaa
     4021 gccgactctg cgcaccatcg cggagatgac cgggcttgcg atcacgacga tttcgcgggc
     4081 cctcaacaac gcccccgaac tcagccgcga gacgcgcgag cgggtgcaga agatcgcggc
     4141 cgagatcggc tacgtgccgg accgcacggc gctgcggctg aagaccgggc ggacgcacgt
     4201 catcagcctg atcctcgacc cgcacgacga gatcatcaat ttcagccagt cgctggtgag
     4261 cggcatcagc gcggcgctgg gcggcacgcc gtaccatttg gtgatcacgc cgagcttccg
     4321 cggcgcgtcg ccgctcgatc cgatcaacta cgtgctgcgc aacaggatgg cggacggggt
     4381 gatcttctcg cgcaccgagc cgggcgacgc gcgggtgaag ctgctgctcg acagcaattt
     4441 cccgttcgtg acgcatgggc ggacggacct gggcgcggcg cacccctatg tcgactacga
     4501 caattttgcc tttgcctatg cagcggccat gcgcctgcac agcaagggac gccggcacct
     4561 gtcgatgatc tcggtcaatc cgcgcttcac cttcgggcgg cacctgcgcg acgggctgat
     4621 caaggcggcg aacgaaaccg gcatcagcta cgaactcgag accggcgtga cgctcgacga
     4681 caaccccgag gacatccggg tggcgacgat gcggcggatc gcccagggca aggcccccga
     4741 tggctatatc tgcccgggcg acgcggtggc gctggcagtg atcgccggga tcgtcgattc
     4801 cggccggcag gtggggcgcg acgccgacat cgtcaccaag cagatgagcg gcattttttc
     4861 gctggtgcgg ccgaaggtcg acgtgatcag cgaggacatc gcgctggcgg ggcggcagct
     4921 gggcgaattg ctgctgaagc ggatcgccgg gcagccgctc gactcgctgc agatcctgca
     4981 gcttcccgag atcatgttct aggcggcggg cgggccttcg agcgcctcgc gcagcgcctc
     5041 gagctccagc cactggtcct cggcggcgga acgggcggtt tccgcggcgg tgagcttggc
     5101 ggtggcgtcg gcgaaggccc tggggtcgcg ggcgtagagg ccggcgtcgg cgagcctggc
     5161 gttgaggcgg gcgatctcgg cggcgaggcg agcgatctcg gcgggcagcg tctcgagcgc
     5221 gtgcttgtgc ttgaaggaga gcttggcttt gccggcggac gcggcgatgg ccggcatcgg
     5281 ctgcgaccgg ccgccccgcg cggcacgcgg cgcctcgggc ttggtgacgc cgtagccgcg
     5341 ctgggcgacc atgtcggaat agccgccggc atattcggtc cagcgcccct cgccttcggc
     5401 gacgacgatc gaggtggcga cgcggtcgag gaaatcgcgg tcgtggctga cgacgatcac
     5461 cgtgcccgga tagtcgccga gcatttcctc gagcaggtcg agggtttcga ggtcgaggtc
     5521 gttggtcggc tcgtcgagga cgatgacgtt ggagggcagc gccaggatgc gggccagagc
     5581 gagccggccg cgctcgccgc ccgagagctt tgcgaccggg gtgcgggcct gctcggggcc
     5641 gaacaggaag tccttcatat agcccatgac gtgcttgggc tggccgttga tgacgagggt
     5701 gtcggagccg ccggtggtca gcgcctcctt cagcgtcgcc gttggatcga ggcgggcgcg
     5761 gcgctggtcg agggttgcca gctcgatgtt ggagccgagc cggacgcggc cggaatcggg
     5821 agcgatctcg ccggtcagca gcttgatcag cgtggtcttg ccggcgccat tggctccgac
     5881 gatgccgacg cggtcgccgc ggatgatgcg ggtggtgaac tcgtcgacga tgacgcggtc
     5941 gccgaagctc ttggcgacgc gctcggcgtc gacgacgagg cggccggaaa gatcggcccc
     6001 ggcgacctgc agcttgacgt cgccgacggc gcggcgctgc tcgcgccggt cctggcgcag
     6061 gctggagaga cgttccaggc gacggacgtt gcgcttgcgg cgggcagtga cgccgtaggt
     6121 cagccagtgt tcctcgcgga cgatctggcg gtcgagcttg tggcgcgcca gctcctcttc
     6181 ctcgagcacg gtgtcgcgcc atgattcgaa ggcgccgaag ccgcggttga ggcggcgggt
     6241 ggtgccgcgg tcgagccaga cggtggcgcg ggtgagatcg gagaggaagc ggcggtcgtg
     6301 gctgacgatg acgagggcgg agcgcaggcc cttcagctcg gcttcgagcc attcgatcgc
     6361 cggcaaatcg aggtgattgg tcggctcgtc gagcagcagg atgtcgggct cgggcgccag
     6421 cacgcgggca agcgcggcac ggcgggcctc gccgccggag agccgcgccg ggtcctcggc
     6481 gccggtcagc ccgagatgct cgagcaggta gcgggcacgg tgcgggtcgt tgccggcctc
     6541 gagcccggcg gcggcatagt cgagcgtcgt ggcaaagccg gagaggtccg gctcctgcgg
     6601 caggtagcgg atggtcgccc ccggctgcag gaagcgctcg ccgccgtcgg cctcgatggc
     6661 gccggcggcg atccgcagca gggtggactt gcccgagcca ttgcggccaa ccagcgcgac
     6721 tttgtcaccg ggcagcacgg agagctcggc gccgtcgagc agcagggtcg agccgagggt
     6781 caggcggatg gcctggaggg cgaggatggg agcggcgggc atggtcgcgc gatagaccac
     6841 ggccggcgcc gcagatcaat cgcccaggag cggaagcggc gttacgtcat cgaggccagc
     6901 cgccaggcgg gcgccgccgg ggacgaaaac gtagcggttg tcgacgacgg cgagcaggtc
     6961 gtcgctggtc gcatggtcct tgatgcggtc ggcggcatcg gcgtcgagga catagatggt
     7021 gcgcggctcg aaattgccgg tgtccatcgc ctggtcgtcg ctggcgttga gggcatcgag
     7081 tgccgcctgg tcgacgcggc cgagatagac cgaatcgacg gccatgtgat gcagcaccgc
     7141 gtagtattcg agctgccgcc agtcgaggcc cttgtaggcc gcggggatgg cgcgcaccgc
     7201 ggtgtagccg gcgtcggcgg cgcgctgcca gaacccggac ttgaggtcgg tgctccattg
     7261 cgccgacggg ggcggtgcgt aggtgcggaa ctgcgaccag ccgggctgcg agtcgacgat
     7321 ctgcgcggcc aggcacgcgg tcatcaccag caccgcccag gcgggcgaga agcggcggcc
     7381 gagcaggacc acggcgccga tggtgacgag atagaggatg ggccagacga agcggccgga
     7441 ggagcggaag atgccgccca gggcttccag ccggtcgccg atcgggatcg ccggcagctc
     7501 gatgccgagg acgccgatgt ggttcgacag cgcgcagacc atcagcagca gcgccatcag
     7561 cagcagcggc agccagcggg cggtgacgag gacgcgcagc tttgccaccg cccccgaaaa
     7621 aatcgacagc acgaggatgg cgaggatgcc gatgccgagg aagctcaggc cttcgtagtc
     7681 gtatttggcg tgcggcaggt cggggacgag ctgcgaccag tcgcggtagg tgaggaacgg
     7741 ccagaacagg ttcagccggt aggagccgaa gccgtagctg ccgagcgagc cggtgtagaa
     7801 gaagccgacg agccacagca cgaggacggc gacgagggcg atcagcaccg gctcgaggat
     7861 ggcatggcgc cagccgatgc ggcgggtcca gaggcgttgc acccatgccg caagccagag
     7921 gccgagcacc atggcgagca ggtaggcgtg gatggatgcg gtcagcccgg cgagcagcgg
     7981 ccaggcgtag aggcgcggcg gggtgcgccg ggcgtagagg tacatggcgg ccaggatcgt
     8041 ccagtggccg gagagcgcca tgtgcagcgt ggtgcggaac aggaaggccg gggtgatgac
     8101 gacgaagccg gcggccagca gcgcgaccag ccggcggcct cccatctggc gcgcgacgag
     8161 gtagccgaac agggcctgca gggtgaagct cagcagccac caatagcccc agtactggaa
     8221 cggccggggc agccagggcg acagcagctt gaaggggatg gcgaagagcg gcaggccatc
     8281 gaccagggcg atcgagttgg cgagctcgat gcccagtcgt gggctggcgc cgggcggcgt
     8341 gccccagggc gcgtcgcgaa agaacatcca gcccagggtg tgcatggcgc gatcgccgac
     8401 gtcgaggaag gcgatgttgg tggggatcag cacccaccag ccggcgaaga cgaaaaaagc
     8461 agcgatcccc agggccattg cggccaagcc gccgaggagg tcgcgcaatc tgtcgggcaa
     8521 ggtgacgtcc gaaggtgggg tggcgctatc tagagagagc ccgcgggttg cgcaagcggt
     8581 gagctcaatg cgccgccgcg gcggggggtt gcgcgccgta gcgggcccag atgttcagcc
     8641 cgtcaagcaa ggcggcgccg tcgcgggcga aaatgaagcg gccgtcgatc caggcgagca
     8701 ggtcgccggg ccgaaggcgg gcggcggtgg cgagggtcgc ggcgtggccg acttcgtaga
     8761 gggtgccggc ctcgagcgtg ccggtggcaa gttcaccggc ttcgcgcgca gcgagcgcgt
     8821 gttcggcccg gccgtcggtg cgaccgagat aggcagcatc ggtcgccatg ccgtgggtga
     8881 cggcaaagta ggagagcgcc cgccagtcgc cgaagatggc ctcgtacggg atggcgcgca
     8941 ggcgggtgaa gccggcggcg gcggcgcggt cccagaacgg cgaggccagc ggcgtcgacc
     9001 acacggcaga cggcgctggc agggttttgt ggaagcgcaa ctcggacggg gccgcatcga
     9061 caaattgcgc ggcgagcgcc accacggcga tgccgacggc gagcgcgggc cgcagccgcc
     9121 agccgagcgc gaccacggcg ccgacggtca gcagatacac cgccggccag acgaagcggc
     9181 cggaggaccg gaagtcggcg gcaaagtgcc ggaagacgct gggcagcggc acggtgaaga
     9241 gctcacgacc gccgatggcg atgtggtcgg aaagcgcata gccaaacatc agcacgacga
     9301 cgaccagcag cggcaaccag cggtgcgagc cgagccggcg gagacgcggc agcgcgccgc
     9361 tggcgatggc gaccagcagc agcgcaagaa caccgatgcc gaggaaggcc atgccctcgt
     9421 agtcgccccg ccccgccgga attggcggaa cgagcctcga ccagtcgaag gggatgacga
     9481 agcccagcag gttcaggcga tagacgccgt agccgccgat gccgagcgag ccggtcatga
     9541 agaagccgac ggcccagagg acgagcgccg tcggcaccag cacgacggcg atctcggctg
     9601 caacgccgct ccagccgagg ctgccggccc agcggcgccg ggcaaggtcg gcgacccaga
     9661 tggccagtac catggcgagg aggtaggcgt ggatcatcgc caccaggcag gcgacgagcg
     9721 gccacatcca gcggcgcggc ggcagcgggc gcgcgtagag ccagagggcg agcagcagcg
     9781 tccactggcc gctcagggcc aggtgcatgg ggaagcgaaa caggtagacc ggcgcaacca
     9841 gcgcgaagcc cgaggcaacc agcgccaggc cggatcgcgc gccgagcgcc cgcgccagcc
     9901 gccaggcgaa cagcga
//
LOCUS       DATAZA010000542         2186 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_210647, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000542 DATAZA010000000
VERSION     DATAZA010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2186
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_210647"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            83..718
                     /locus_tag="VHZ56_13360"
     CDS             83..718
                     /locus_tag="VHZ56_13360"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX4299003.1"
                     /translation="MTKPTETAPDNVKLFPGSGQGTLTTPAGEELPVRTFERGEEVVL
                     VVLINLDDERGSDSVEAAKLEYTSRRGLIKLRGEAVFEDQSLIRFHPDGDAEVLQRRD
                     FVRVHAPHSVTVTDDDEGRQRVHTVDLSGGGMLLADGEELEVDQTIHFAISIVTTELP
                     IEGIARVVRIREDGKRALMFEQIAEHDRQRLIRFVFECMRTARARTRGDWT"
     gene            750..1145
                     /locus_tag="VHZ56_13365"
     CDS             750..1145
                     /locus_tag="VHZ56_13365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299004.1"
                     /translation="MAKNKSDAKGKKGDKKGKKGKGSADGISVAGHPHAAAQVRRAKG
                     FGGVSFFLITAYFSFKAGVPADQVAVRALIAGIGGYLLAWMCAVTVWRQLVLAELRTA
                     LESGRARMEPVAAGAPAGDKATPADGDGK"
     gene            1189..1425
                     /locus_tag="VHZ56_13370"
     CDS             1189..1425
                     /locus_tag="VHZ56_13370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299005.1"
                     /translation="MDPIHPIVPTAPGIPAVAPAPAVAPTDRRVERQRQQEGRERRRR
                     QQQRRDSYNGDESYASDDDDDAGDDGRLHVDVTA"
     gene            1659..>2186
                     /locus_tag="VHZ56_13375"
     CDS             1659..>2186
                     /locus_tag="VHZ56_13375"
                     /inference="COORDINATES: protein motif:HMM:NF012874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEX4299006.1"
                     /translation="MSLSILTNISAMNTQQNLLKSSDAVSQSMARLSSGLRINTAADD
                     AAGYAISQGLTSQVNGLNQASSNTNDAISMVQTASSSLNDVQNMLQRVYELGVQYNNG
                     SNSDTDKSDIQAEVNQLTQEIDRQQSSSNFNGLNLLNGTAGSSGTVTFQVGANSGDTL
                     TATFSNIEGSGGLGGI"
BASE COUNT          409 a          762 c          693 g          322 t
ORIGIN      
        1 tggcctacac attgacggga ttgccccttc aggaggcggt cgcatctgcc gatcctgaac
       61 gcatcgcagc tgagttgctg agatgaccaa gcccaccgaa accgcacccg acaacgtcaa
      121 gctctttccc ggcagcgggc agggcacgct caccacgccc gcgggcgagg agctgcccgt
      181 gcgcaccttt gagcgcggcg aagaggtggt gctggtggtc ctcatcaatc tcgacgacga
      241 gcgcgggagc gactccgtgg aggccgccaa gctcgagtac acctcgcgcc gggggctgat
      301 caagctgcgc ggcgaggccg tgttcgagga tcagagcctt atccgctttc accccgatgg
      361 cgacgcagag gttctccagc ggcgcgactt cgtgcgcgtg cacgcgcccc attcggtcac
      421 ggtgaccgac gacgacgagg gcaggcagcg cgtacacacc gtcgatctca gcggtggcgg
      481 catgctgctc gccgacggtg aagagctcga ggtggaccag accatccatt tcgccatctc
      541 gatcgtcacc acagagcttc cgatcgaggg catcgcccgc gtcgtccgca tccgcgagga
      601 cggcaagcgc gccctgatgt tcgagcagat tgccgagcac gaccgccagc gcctcatccg
      661 gttcgtgttc gagtgcatgc gtaccgcccg ggcccggacc cgcggcgact ggacctgacc
      721 ccgtccccac agcgaccgag gacaccacga tggctaagaa caagagtgac gcgaagggca
      781 agaagggcga caagaagggc aagaagggca aaggctccgc tgacggcatc agcgttgccg
      841 ggcaccctca cgccgccgct caggtgcgtc gcgccaaggg cttcgggggc gtctccttct
      901 tcctcatcac cgcctacttc tcgttcaagg ccggggttcc ggccgatcag gtggccgtgc
      961 gcgcgctcat cgcgggcatc ggcggctacc tcctggcctg gatgtgcgcg gtcaccgtgt
     1021 ggcgccagct ggtgctggcc gaactgcgca cggcccttga gagcggccgt gcccgcatgg
     1081 agccggtcgc ggccggcgct cccgccggtg acaaggccac gcctgctgac ggcgacggca
     1141 agtagcgcgc cgccactgat caccggggac caccactaga agcaggccat ggatccgatc
     1201 cacccgattg ttccgacggc ccccggcatt cctgccgtcg ccccggcgcc ggcagtagcg
     1261 ccgaccgacc ggcgggttga gcgccagcgc cagcaggagg ggcgcgagcg ccgccgccgc
     1321 cagcagcagc gccgggattc ctacaacggc gacgagtcct acgcctctga cgatgatgac
     1381 gacgcgggcg acgacggccg cctgcacgtc gacgtcaccg cctgaccccg ccgcgccgga
     1441 gcccccgacc gcggtacacc gcgccgtgag cgcgcgtggt gcgatggcgc agacgcccgt
     1501 gcctccggga cgaaagcccc cctctcccca aaaatgtcca gacggttctg gacactccta
     1561 aagtcgccac gtagggcgtc gataactcgg gatgtaaccg gccgcaagga gcggccgggg
     1621 gactaacaac ccaaccacac cacggaggtg tactcactat gtccctgtct attctgacga
     1681 acatctcggc gatgaacact cagcagaacc tgctgaagtc gtctgacgcc gtttcgcagt
     1741 cgatggctcg cctttcttca ggcctgcgca tcaacactgc cgcggatgac gccgctggct
     1801 acgcgatctc gcagggcctg acctctcagg tcaacggcct gaaccaggcg agcagcaaca
     1861 ccaacgacgc catttcgatg gtgcagaccg cgtcgagttc tctgaatgac gtgcagaaca
     1921 tgcttcagcg tgtttacgag ctgggcgtcc agtacaacaa cggttccaac tcggacaccg
     1981 acaagtcgga catccaggct gaggtgaacc agctgacgca ggaaatcgac cgccagcaga
     2041 gctcctcgaa cttcaacggg ctcaacctgc tgaacggcac cgccggcagc agcggcacgg
     2101 tcaccttcca ggtcggcgcg aacagcggcg acaccctgac cgccacgttc tcgaacatcg
     2161 agggcagcgg cggcctgggc ggcatt
//
LOCUS       DATAZA010000543         2351 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1373149, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000543 DATAZA010000000
VERSION     DATAZA010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2351
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1373149"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            97..894
                     /locus_tag="VHZ56_13380"
     CDS             97..894
                     /locus_tag="VHZ56_13380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011426020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX4299007.1"
                     /translation="MRIVVIGGTGLIGAKTVAVLRQGGHEVVAASPKSGVNTITGEGL
                     KEVMTRTQVVIDLANSPSFDDKAVLDFFETSGRNLLSAEADAGVRHHVALSIVATDRT
                     DNGYFRAKAAQEKLIVASGIPYTIVRATQFLEFLDGIAASSTDGTTVRLPPSLFQPIA
                     ADDVARIVAEVALAAPRNGIVEIAGPERALFSDIVARYLKAVGDPREVVADPEARYWG
                     GRIQEQSLVPLGEARLGRVGLDEWLRRTRAGRGGRANSDRSISGISA"
     gene            928..2117
                     /locus_tag="VHZ56_13385"
     CDS             join(928..1195,1195..2117)
                     /locus_tag="VHZ56_13385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612008.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HEX4299008.1"
                     /translation="MARRSRRTHSPAFKAKVALAAIKGEKTLAELAQQFDVHPNQITA
                     WKGQLVDAAAGLFGSGGTPAEVTTVVDVKTLHAKIGELTLEVDFLGRCARQSRAAERK
                     AMIDRAHELPLTRQAELLRLGRSSLYYEPRPVPGSELAIMRRIDALHLDYPFAGSRML
                     RDLLRSEGVAIGREMVRTMMRRMCIEALYRRPNTSKAAPGHKIYPYLLRGLAVDRPNQ
                     VWARLAQGSVRRSRMEWQGEGMDITYIPMARGFVYLAAVVDWFTRRVLAWRLSITMEV
                     DFCSEAVEDALARYGRPEIFNTDQGAQFTSAAFTGLLLENKIAISMDGRGSWRDNVFV
                     ERLWRSVKYEEVYLRAYDSVGEARTSLGRYLDFYNALRPHSSLDARTPDQAYFNHKPL
                     SAAA"
BASE COUNT          443 a          729 c          765 g          414 t
ORIGIN      
        1 tgtatgagcc gggctcaatc gactttaatc tgtgcgtcga aggcgcattc ggccccattg
       61 aaaagatctc cagccaggga caagggagtt tagcccatga ggatcgtcgt catcggcggc
      121 accggcctga tcggcgcgaa gaccgtcgct gttctgcgcc agggcgggca cgaggtcgtt
      181 gccgcctcgc ccaaaagcgg tgtgaacacc atcaccggcg aggggctgaa agaagtcatg
      241 actcgcacgc aggtcgtgat cgacctggcc aattcaccgt catttgacga caaagcggtg
      301 ctggacttct tcgagacctc cggccgcaac cttctttccg cggaggccga tgcgggcgtc
      361 cggcaccacg tcgcgctctc catcgtcgcg accgaccgga cggataacgg ctatttccgc
      421 gccaaggccg cccaggagaa actgatcgta gcctcgggca tcccctacac catcgtccgt
      481 gcgactcagt tcctggaatt cctcgacggc atcgccgctt cgagcacgga cgggaccacg
      541 gtcaggctgc cgcccagcct gttccagccc atcgccgcgg acgacgtggc acgcatcgtc
      601 gccgaggtag cgctcgcggc gccgcgcaac ggcatcgtcg agatcgccgg tccggaacga
      661 gcgttgttca gcgacatcgt cgcccgctat ctcaaggcgg tcggcgaccc gcgcgaggtc
      721 gtggccgacc ccgaggcccg atactggggc ggccggatcc aggagcagtc gcttgtgccg
      781 ctaggcgaag cccgcctcgg gcgtgttggt ctggacgaat ggctccgccg cacccgggca
      841 ggaagaggtg gtcgggcaaa ttcggacagg tcgataagtg gaatttctgc ctgagagcgg
      901 cgagtatgcc gcgtatcagg agcaaccatg gcaagacgga gccgccggac gcactcaccg
      961 gctttcaagg caaaagtggc gctggccgcc atcaagggcg agaagacgct ggctgaattg
     1021 gcgcagcagt ttgatgtgca cccgaaccag atcaccgcct ggaaggggca gttggttgac
     1081 gccgctgctg ggctattcgg ctccggcggc acccctgccg aggtgaccac ggtggtcgac
     1141 gtaaagacgc tgcacgccaa gatcggggag ctgacactgg aggtcgattt tttggccggt
     1201 gcgctcggca aagccgggct gctgagcgca aagcgatgat cgatcgggcg cacgagctgc
     1261 ctctgacgcg gcaagcggag ctgctgcggc tcggccggag cagcctttac tacgagccgc
     1321 ggcctgtgcc ggggagcgag cttgcgatca tgcggcggat cgacgcgctg cacctggact
     1381 acccgttcgc gggcagccgg atgctgcgcg atttgctgcg cagcgagggc gttgcgatcg
     1441 gccgggagat ggtgcgcacg atgatgcggc ggatgtgcat cgaggcgctg tatcgccgtc
     1501 cgaacacgtc gaaagccgcg ccaggccaca agatttaccc gtatttgcta cgtggactgg
     1561 cagtcgatcg gcccaaccaa gtgtgggcga gacttgccca aggttccgtc cggcgaagcc
     1621 ggatggaatg gcaaggcgag gggatggata tcacgtacat tccgatggca cgcggcttcg
     1681 tctacctcgc tgccgtcgtg gactggttca cgcggcgggt tctggcgtgg cggctgtcga
     1741 tcaccatgga ggtcgatttc tgctctgaag cggtcgagga tgcgcttgcc aggtacggcc
     1801 gcccggagat tttcaatacc gatcagggcg ctcagttcac gagcgccgcc ttcaccgggc
     1861 tgctgctgga gaacaagatc gccataagca tggacgggcg cggctcctgg cgggacaacg
     1921 tctttgtcga gcggctatgg cggtcggtca aatatgagga ggtctatcta cgggcctacg
     1981 acagtgtggg cgaggcacgc acctcgctcg gcaggtatct ggatttctat aacgcgttac
     2041 gcccacattc gagccttgac gcgcgaacgc cagaccaagc ctacttcaac cacaagccgc
     2101 tatcggcggc agcgtgaatt tcgccgccac gtgggtcgtc gctccggtcg ggctacgccc
     2161 tccctccgca ataaccccac gtggcacact acgaaaccaa ccggcaggag atccacttat
     2221 cgatggcgaa acgctgtcgc gactaggccg accacctctg agaaaggcga caacgccact
     2281 gtcagcgtcg tcgcacacgc ccaggcatcg ctgcttcact ctccaggctg ttaacaaatt
     2341 cttaatgttt g
//
LOCUS       DATAZA010000544         2333 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_444877, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000544 DATAZA010000000
VERSION     DATAZA010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444877"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2..568
                     /locus_tag="VHZ56_13390"
     CDS             2..568
                     /locus_tag="VHZ56_13390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007775821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX4299009.1"
                     /translation="MLIQTFLLYYGVSQFVEVRQSIFWPVLRDPFNSAVISLALCTAG
                     YTAEIFRGGLLAVPAREIEAARAVGMSGLTLFRRIIAPIALRQALPAYSTEIVLMMKA
                     TSLASLVTVWEVTGIAGKIITHSYRTLEVFVCAAAIYLVLNFVVIRLMRYLEYLISPH
                     LRGRPEPDVAATVTGIAHPGQDLPELPT"
     gene            565..1335
                     /locus_tag="VHZ56_13395"
     CDS             565..1335
                     /locus_tag="VHZ56_13395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012092930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4299010.1"
                     /translation="MSGPALSIRDIRKAYGGNEVLKGISLDAQVGDVISILGASGSGK
                     STLLRCINLLEIPDAGIVTVAGETIAMRPKRGGGQEPADRRQVDRIRTELGMVFQSFN
                     LWSHMTVLQNVIEGPVHVLHRPRAECVAEAEALLDKVGIADKRNFYPAHLSGGQQQRA
                     AIARALAMKPKVMLFDEPTSALDPELVGEVLRVLRALAEEGRTMLVVTHEMGFARTVS
                     NRVVFVNQGLIDADGPPEEVFGGQSSERFRQFVSGLHA"
     gene            1328..>2333
                     /gene="solA"
                     /locus_tag="VHZ56_13400"
     CDS             1328..>2333
                     /gene="solA"
                     /locus_tag="VHZ56_13400"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: protein motif:HMM:NF008425.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050131 - N-methyl-L-amino-acid oxidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HEX4299011.1"
                     /translation="MPEAGYDVAVIGLGAMGAHAAAELAARGLSVIGIERFGPLHERG
                     SSHGDSRLIRLAYFEDPAYVPLLRRAYRRWRELERIAGEPLLTITGVLEVGRMDGTVV
                     PGVLASCAQHDLPHEMLDATEVTQRFPAFAMRPGDVAVLEPEGGFLKPERAVAAALKR
                     AGHAGAVLHFNEPVTAIEPGDEGVTIMTAAGRHRAAKVVVAAGSYVAGLVPTLAPYVR
                     PIKQVLGWYPSRDPLATALGRMPGFIVDEGEWSYFGFPDLGEGVKVGRHGHYRQEIDP
                     ELPNPPIDAADRAATEDFMARRMPGVVPTGTRFVSCRYTMLPDEDFLIDALPGEPRII
                     V"
BASE COUNT          355 a          735 c          838 g          405 t
ORIGIN      
        1 gctgctgatc cagacgttcc tgctctacta tggggtcagc cagttcgtgg aggtgcggca
       61 gagcattttc tggccggtgc tgcgcgatcc gttcaattcg gccgtgatct cgctggcgct
      121 ctgcacggcg ggctacaccg ccgaaatctt ccgcggcgga ttgctggcgg taccggcgcg
      181 cgagatcgag gcagcgcggg cggtcggcat gtcggggctg acgctgttcc gccggatcat
      241 cgccccgatc gcgctgcgac aggcgctgcc ggcctattcc accgagatcg tgctgatgat
      301 gaaggcgacc tcgctggcca gcctcgtcac cgtgtgggag gtgaccggca tcgccggcaa
      361 gatcatcacc cacagctatc gcacgctcga agtgttcgtc tgcgcggcgg caatctatct
      421 ggtgctcaat ttcgtggtga tccggctgat gcgctatctc gaatatctga tctcgccgca
      481 cctgcggggg cggccggagc cggacgttgc agcgacggtg accggcattg cgcatccggg
      541 gcaggatttg ccggagctgc cgacgtgagc ggtccggcgc tgtcgatccg cgacatccgc
      601 aaggcttacg gcggaaacga agtgctgaag ggcatctcgc tcgacgcgca ggtcggcgac
      661 gtgatctcga tcctcggcgc ttccgggtcg ggcaagagca cgctgctgcg ctgcatcaac
      721 ctgctcgaaa tccccgatgc cggcatcgtg acggtcgcgg gtgagaccat cgccatgcgg
      781 ccgaagcgcg gcggtggcca ggagccggcc gatcgccggc aggtcgatcg tatccgcacc
      841 gagctcggga tggtgttcca gagcttcaac ctgtggagtc acatgacggt actgcagaac
      901 gtcatcgagg gtcccgtgca cgtcctgcac cggccgcggg cggaatgcgt tgccgaggcg
      961 gaagcgctgc tcgacaaggt gggtatcgcg gacaagcgca atttctatcc ggcgcatctg
     1021 tcgggcggcc agcaacagcg ggcggcgatt gcgcgcgcat tggcgatgaa gcccaaggtc
     1081 atgctgttcg acgagccgac ctcggcgctc gatccggagc tggtgggaga agtcttgcgg
     1141 gtgcttcggg ccctcgccga ggaaggccgc accatgctgg tcgtcaccca cgaaatggga
     1201 tttgcgcgga ccgtctcgaa ccgcgtggtc ttcgtcaacc aggggctgat cgacgccgac
     1261 gggccgccgg aagaggtgtt cggcggccag agctccgagc ggttccggca gttcgtttcg
     1321 ggcctgcatg cctgaggccg gatacgacgt tgccgtcatc ggcctcggtg ccatgggcgc
     1381 ccacgcggcc gccgagctcg cggcgcgcgg gctgagcgtg atcggcatcg agcgcttcgg
     1441 accgctgcac gagcgcgggt catcgcacgg cgacagccgg ctgatccggc tcgcctattt
     1501 cgaggacccg gcgtacgtgc cgctgctccg gcgagcctat cggcgctggc gggagctgga
     1561 gcgcatcgcg ggcgagccgc tgctgacgat caccggcgtg ctcgaggtgg gccggatgga
     1621 cggcacggtg gtgcccggcg tgctcgcctc ctgcgcccag cacgacctgc cgcacgagat
     1681 gttggatgcg acggaggtca cgcagcggtt cccggcgttc gcgatgcgtc ccggggacgt
     1741 cgcagtgctc gaaccagagg gcgggttcct caagccggag cgagctgttg ccgccgccct
     1801 caaacgagcg ggacatgcag gcgccgtgtt gcatttcaat gagcccgtga cggcgatcga
     1861 acctggcgac gagggcgtga caatcatgac cgcggcgggc cgccaccggg cggcgaaagt
     1921 ggtcgtcgca gccggttcgt acgttgcggg gctggtgccg acgctggcgc cgtatgtgcg
     1981 gccgatcaag caggtgctcg gctggtatcc gtcgcgcgat ccgttggcga cggcgctggg
     2041 gcggatgccg ggcttcatcg tcgatgaagg cgagtggagc tatttcggct ttccggatct
     2101 gggcgagggc gtcaaggtcg gccgccatgg ccactatcgc caggagatcg atccggagct
     2161 ccccaatccg ccaatcgatg cggccgatcg cgccgcgacg gaagatttca tggcgcgacg
     2221 gatgcccggc gtggtgccga ctggcacgcg cttcgtcagc tgccgctata ccatgctgcc
     2281 ggacgaggat ttcctgatcg acgcgctacc tggcgagccg cggatcatcg tcg
//
LOCUS       DATAZA010000545         2972 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2996571, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000545 DATAZA010000000
VERSION     DATAZA010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2972
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2996571"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..642
                     /locus_tag="VHZ56_13405"
     CDS             <1..642
                     /locus_tag="VHZ56_13405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4299012.1"
                     /translation="GDIGRMVDEFSSFARMPEAKPVRADLSETVRSAVFLESVRLPDV
                     TINMDLPEASLSAWFDPRLISQVLTNLIKNAVEAIEGAGLEAIKEPVITVAVHEEGAK
                     ARLSVSDNGKGWPKENRHRLLEPYVTTREKGTGLGLAIVARIIEQHGGSVDLIDAEPD
                     ESGRIGACFTFTLPLLSPEAADEAEDAATATANQSAAVADTHGEPPVLAVEKT"
     gene            644..2026
                     /locus_tag="VHZ56_13410"
     CDS             644..2026
                     /locus_tag="VHZ56_13410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004688404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX4299013.1"
                     /translation="MARDILIIDDEDDIRDLIAGILEDEGYETRQAHDADSGLNEIAR
                     RRPSLVYLDIWMQGSRLDGLQLLDVFQTQHPEMPVVMISGHGNIETAVSAIRRGAYDY
                     IEKPFKIDRLLLITQRAMEATRLKSEVEELRGRAQSQSVDMVGASPALQQARGVIEKS
                     APTNSRIFVSGPSGSGKGLAARLIHQRSPRAEAPFVEINCSLYSPDEVQVVLFGRETR
                     EKTGTVRTEVGALERAHGGTLYLSEVAALPAPAQAALLRTLVENKFNRVGGTVGVPID
                     VRIISASSQNVAALIESGQFRSDLFHRLSIVPLQLTPLRERREDVPPLVELFLDQICR
                     MHNLKSLSIGDDAIAVLQAQDWPGNARQLRNSIERLLILIKDTPPENGIIGAQMLPSD
                     IGEVLPTVGDTDESAHLMSLPLREAREVFERQYLMAQIERFGGNISKTAEFVGMERSA
                     LHRKIKSLGL"
     gene            2176..2421
                     /gene="hfq"
                     /locus_tag="VHZ56_13415"
     CDS             2176..2421
                     /gene="hfq"
                     /locus_tag="VHZ56_13415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HEX4299014.1"
                     /translation="MPGEKAQNLQDAFLNHVRKHKVPVTIFLVNGVKLQGVITWFDNF
                     CLLLRRDAQSQLVYKHAISTIMPGAPIQLFDPEHTEE"
     gene            2427..>2972
                     /locus_tag="VHZ56_13420"
     CDS             2427..>2972
                     /locus_tag="VHZ56_13420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEX4299015.1"
                     /translation="MADDPEDEGRSGGPDRFIDQRAAPTRVGLIVPDVRGVASGHSIE
                     MRKAEFEGLAAAIRVEIVFSEVIRVREVKPATFIGGGHVADLKARVADGKVELLLVDG
                     ALAPVQQRNLETETGAKVLDRTGLILEIFGERAVTREGVLQVELAHLNYQRSRLVRSW
                     THLERQRGGFGFLGGPGETQIE"
BASE COUNT          540 a          963 c         1025 g          444 t
ORIGIN      
        1 ggcgacatcg gccggatggt cgacgagttc tcgtcgttcg cccgcatgcc ggaggccaag
       61 ccggtccggg ccgacctcag cgaaacagtg cgctcggcgg tgttcctcga aagcgtccgt
      121 ttgccggacg tcaccatcaa catggatctg ccggaagcgt cgctcagcgc ctggttcgat
      181 ccgcggctca tctcgcaggt gctgaccaac ctcatcaaga atgcggtgga ggcgatcgag
      241 ggcgccgggc tcgaagccat caaggagccg gtgatcaccg tcgcggtgca cgaggagggg
      301 gccaaggccc ggctgtcggt ttcggacaat ggcaagggct ggccgaagga aaaccggcat
      361 cgcctgctcg agccctacgt gacgacgcgc gagaagggca ccggcctcgg cctcgccatc
      421 gtcgcgcgca tcatcgagca gcacggcggc agcgtcgacc tgatcgacgc cgagcctgac
      481 gaaagcggcc gcatcggcgc ctgcttcacc ttcaccctgc cgctgctgtc gccggaagcg
      541 gcagacgagg ccgaggacgc cgccacggcg acagcaaacc agtcggcggc ggttgccgac
      601 acccacgggg agccgccggt actggcggtc gaaaaaacgt agtatggcgc gtgacatcct
      661 gatcatcgac gacgaggacg atatccgcga cctgatcgcg ggcatcctcg aggacgaggg
      721 ctacgagacc cggcaggcgc acgacgccga ttccgggctc aacgaaatcg cgcggcggcg
      781 gccgagcctg gtctatctcg acatctggat gcagggctcg cgcctcgacg ggctgcagct
      841 gctcgacgtg ttccagaccc agcacccgga gatgccggtg gtgatgatct cgggccacgg
      901 caacatcgag acggcggtct ccgcgatccg gcgcggcgcc tacgactaca tcgaaaagcc
      961 gttcaagatc gaccggctgc tgctgatcac gcagcgcgcc atggaggcga cacggctcaa
     1021 atccgaggtc gaggaactgc gcggccgggc gcagtcgcag tcggtggaca tggtgggtgc
     1081 ctcgccggcg ctgcagcagg cgaggggggt gatcgagaaa tcggcgccga ccaattcgcg
     1141 catcttcgtt tccggcccgt cgggcagcgg caaggggctg gcggcgcggc tcatccatca
     1201 gcgcagcccg cgcgccgagg cgccgttcgt cgaaatcaac tgctcgctct attcgcccga
     1261 cgaagtgcag gtggtgctgt tcgggcgcga gacgcgcgaa aagaccggca cggtacgcac
     1321 cgaagtgggc gcgctcgagc gggcgcatgg cggcacgctc tatctcagcg aagtcgcggc
     1381 gctgccggcg ccggcgcagg cggcgctgct gcgcaccctc gtcgagaaca agttcaaccg
     1441 cgtcggcggc acggtcgggg ttccgatcga cgtgcggatc atttcggcca gttcgcagaa
     1501 cgtcgccgcg ctgatcgaga gcgggcagtt ccgctcggac ctgttccacc ggctgtcgat
     1561 cgtgccgctg caactgacgc cgctgcgcga gcggcgcgag gacgtgccgc cgctggtcga
     1621 gctgttcctc gaccagatct gccggatgca caacctcaag agcctcagca tcggcgacga
     1681 cgccatcgcc gtgctgcagg cgcaggattg gccgggcaac gcccggcagc tgcgcaattc
     1741 gatcgagcgg ctgctgatcc tgatcaagga cacgccgccg gaaaacggca tcatcggcgc
     1801 ccagatgctg ccgtcggaca tcggcgaagt gctgccgacg gtgggcgaca ccgacgagtc
     1861 ggcgcacctg atgagcctgc cgctgcgcga ggcgcgcgaa gtgttcgagc ggcaatatct
     1921 gatggcgcag atcgagcggt tcggcggcaa catttccaag actgcggagt tcgtcgggat
     1981 ggagcgcagc gcgctccacc gcaagatcaa atcgcttggg ctgtgatgcg gtcagcgcgg
     2041 gtaggcagtg ccaccccgat gtgccatatt gacttcgtgg ggggcggacc aacaaaacga
     2101 ccggggaagc gcggcgcttt cccggcgatc aaagtcttgg cggcaagaac cgccgtaaat
     2161 gacaagaggc cataaatgcc cggcgaaaag gcacagaatc tacaggacgc gtttctcaat
     2221 catgttcgca agcacaaggt cccggtgacg atcttcctcg tcaacggcgt caaattgcag
     2281 ggcgtgatta cctggttcga caatttctgc ctgttgctgc gccgcgatgc ccagtcgcag
     2341 ctcgtctaca agcacgccat ctcgaccatc atgcccggcg ccccgatcca gctgttcgat
     2401 cccgagcaca cggaagaata ggggccatgg ccgacgatcc ggaagacgag ggccgctccg
     2461 gcggccccga tcgattcatc gaccagcggg cagcaccgac gcgggtgggc ctcatcgtgc
     2521 cagacgtgcg cggggtggcg agcgggcact cgatcgagat gcgcaaggcc gagttcgagg
     2581 gccttgcggc ggcgatccgg gtcgagatcg tgttctcgga agtcatccgt gtccgcgagg
     2641 tcaagccggc gaccttcatc ggcggcggtc atgtcgccga cctcaaggcc agggtcgccg
     2701 acggcaaggt ggaactgctg ctggtcgacg gggcgctggc cccggtgcag cagcgcaacc
     2761 tcgagaccga gaccggcgcc aaggtgctcg accgcaccgg gctgatcctc gaaatcttcg
     2821 gcgagcgggc cgtcacgcgc gaaggcgtgc tgcaggtcga gctggcgcat ctcaactacc
     2881 agcgcagccg gctggtgcgg tcgtggaccc acctcgagcg gcagcgcggc ggcttcggct
     2941 tcctcggcgg ccccggcgag acgcagatcg ag
//
LOCUS       DATAZA010000546         3682 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3464338, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000546 DATAZA010000000
VERSION     DATAZA010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3682
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3464338"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..519
                     /locus_tag="VHZ56_13425"
     CDS             <1..519
                     /locus_tag="VHZ56_13425"
                     /inference="COORDINATES: protein motif:HMM:NF017984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crosslink repair DNA glycosylase YcaQ family
                     protein"
                     /protein_id="HEX4299016.1"
                     /translation="PPIQRGDLVLRYLRAFGPASAADMQAWSGMTRLGETFAGVRERL
                     IGFVDEAGRELFDVPDAPRPDADVPAPVRFLGDFDNVVLGFAERSRIVSAESQKALVA
                     ATRSYRAVLVDGVVGGSWSLARSKGAATLTVTPFALLSRRDRRDVEAEGTAFLRFMAE
                     GTPIQEVIVAAP"
     gene            complement(534..947)
                     /locus_tag="VHZ56_13430"
     CDS             complement(534..947)
                     /locus_tag="VHZ56_13430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX4299017.1"
                     /translation="MARILVAEDDDNVRAFVVRALLHAGHDVTEAEDGGLAAELCAER
                     EGAFDLLLSDIKMPVMDGIALALTVAASWPDLTILLMTGFADQRERAHGLEALIYDVV
                     PKPFTLQLLLEKVADALSGKPLELPSLARAAIAVG"
     gene            complement(947..1846)
                     /locus_tag="VHZ56_13435"
     CDS             complement(947..1846)
                     /locus_tag="VHZ56_13435"
                     /inference="COORDINATES: protein motif:HMM:TIGR02098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MJ0042-type zinc finger domain-containing
                     protein"
                     /protein_id="HEX4299018.1"
                     /translation="MSSLDLATVVIACPNCGTRYQVPYGTLGAAGREVQCAQCSKPWH
                     AIADAPEAAPLPAVVPSPEDAMFSPAEEAVLDAAFESAESSTVPAPGPRPLRDPEHER
                     TLAAIRAAIAPKKDAGPVDPAQFDKSRKDFARRQDRLNQRLPLARMRRTARLAALVAL
                     VAVVALGFSLRVDLVTWFPSLAGVYAAIGLPVNIVGLDFEDSKTLMTYRGGKSVMQIT
                     ARIRSIAASPVAVPPVLVTLLDPKGGVVYEWTVAPQASELDPGEILDFSTELSSPPDG
                     AASVRLSFTTGGASAATTPAKAS"
     gene            1968..2627
                     /gene="ftsE"
                     /locus_tag="VHZ56_13440"
     CDS             1968..2627
                     /gene="ftsE"
                     /locus_tag="VHZ56_13440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HEX4299019.1"
                     /translation="MIEFTNVGLRYGHGPEILRDLSFRIEPGSFHFLTGPSGSGKTSL
                     LRLLLLSLKPSRGTVRMFGRDVSRLEQDSLLDMRRHIGIVFQEFRLLDHLTTFENVAL
                     PLRVLGQPESMYRSNVTELLEWVGLGERMDALPPLLSGGEKQRAAIARAVIGRPDVLL
                     ADEPTGNVDPELSLRLVRLFAELNKLGTTIILATHELPLLDSFDFPHMSLRDGQVSLD
                     G"
     gene            2620..3573
                     /locus_tag="VHZ56_13445"
     CDS             2620..3573
                     /locus_tag="VHZ56_13445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4299020.1"
                     /translation="MAEAMLADAPVESAARPQATKRTAAIVPERSVAGRTLVLLIAIM
                     TFLSGVTLGGVVLVQKSAIAWSSDVGREVTIQIRPIEGEVMDSNIRTAIALAEAVPGV
                     SDAHAISLADSEKLLEPWLGSGLDLSQLEIPRLIVVELGDPKSVDLGQLAKVLTGIKG
                     ATLETHAAWRNQLNTMAGTIVLSGLLVLALIVLATVLAVIFATRGTMASNREIVDVLH
                     FIGASNSFIAGEFQGRFLSLGFRGGLVGGVAAVLFFVLVAWATGSLAPSEANAELGFL
                     FGRFSLGFDGIIGIAAVVPVIAALTAITSRLTTRRFLTQTS"
BASE COUNT          526 a         1166 c         1403 g          587 t
ORIGIN      
        1 ccgccgatcc agcggggcga tctggtgctg cggtacctgc gggcattcgg gccggcgagc
       61 gcggcggaca tgcaggcgtg gtcggggatg acgcggctgg gggagacctt tgccggcgtg
      121 cgggagcggc tgatcggctt cgtcgacgag gcggggcggg agctgttcga tgtgcccgac
      181 gcgccgcggc cggacgctga cgtgccggcg ccggtgcggt tcctcggcga cttcgacaat
      241 gtggtgctgg gctttgccga gcgcagccgg atcgtctcgg ccgagagcca gaaggcgctg
      301 gtggcggcga cgcgctcgta ccgcgcggtg ctggtcgacg gggtggttgg cgggtcgtgg
      361 tcgctcgccc gcagcaaggg agcggcgacg ctgacggtga cgccgttcgc gctgctgtcc
      421 cggcgcgacc ggcgcgacgt ggaggcggaa ggaacggcgt tcctgcggtt catggcggaa
      481 ggcaccccca tacaggaggt gatcgtcgcg gcgccgtagt cgggggcccc aggtcagccg
      541 acggcgatgg cggcgcgggc cagcgagggc agctccagcg gcttgccgct gagggcatcg
      601 gcgaccttct cgagcagcag ctgcagggtg aacggcttgg gcacgacgtc gtagatcaag
      661 gcctcgaggc cgtgcgcccg ctcgcgctgg tcggcaaagc cggtcatcag gaggatcgta
      721 aggtcgggcc agctggcggc aaccgtcaac gccagcgcga tgccgtccat caccggcatc
      781 ttgatgtcgg acagcagcag gtcgaaggcg ccctcgcgct cggcgcagag ttcggcggcg
      841 agcccgccat cctcggcctc ggtgacgtcg tggccggcat gcagcagggc ccgcaccacg
      901 aaggcgcgca cattgtcgtc gtcttccgca accagaatgc gtgccatcac gaagccttcg
      961 ccggagttgt ggcggcgctg gcgccgccgg tggtgaaact gagccggacg ctcgcggcgc
     1021 cgtcgggcgg cgagctgagc tcggttgaaa agtcgaggat ttcgccggga tcgagctcgg
     1081 atgcctgcgg ggccacggtc cactcgtaga cgacgccgcc cttgggatcg agcagggtga
     1141 cgaggaccgg cggcacggcg acggggctgg cggcgatcga acggatacgg gcggtgatct
     1201 gcatcacgga tttgccgccg cggtaggtca tgagggtctt ggagtcctcg aaatcgaggc
     1261 cgacgatgtt caccggcagc ccgatcgccg cgtagacgcc ggcgagcgag gggaaccagg
     1321 tgacgaggtc gacgcggagc gaaaagccca gcgcgacgac ggcgaccagc gcgacgagcg
     1381 ccgccagccg ggccgtgcgg cgcatgcggg ccagcggcag gcgctggttg agacggtcct
     1441 ggcggcgggc gaaatccttg cgggacttgt cgaactgcgc cggatcgacg gggccggcgt
     1501 ccttcttggg cgcgatggca gcgcggatgg cggccagggt gcgctcgtgc tcggggtcgc
     1561 gcagcggccg cggcccgggg gcgggcacgg tgctgctttc cgcgctctcg aaggcggcgt
     1621 cgagcacggc ctcctcagcg ggcgagaaca tcgcatcttc cggcgacggc acgacggccg
     1681 gcaaaggcgc tgcctccggg gcatcggcga tggcgtgcca cggcttgctg cactgggcgc
     1741 attgcacctc gcggccggcg gcgcccagcg tgccgtaggg cacctggtag cgcgtgccac
     1801 aattggggca ggcgatgacg accgtcgcga ggtcgaggga actcatggcc gaccctaggc
     1861 cgggcggggt taagtttcct caaactcgcc catgtttcag gctattggcg ccggtctggg
     1921 gttcggctgc tatgatcgcg ccggcttgat tcggaggcgt cgcccgagtg atcgaattca
     1981 ccaatgtcgg tttgcgctac ggccatggcc cggaaatcct ccgcgacctg agtttccgga
     2041 tcgagccggg ctcgttccat ttcctcaccg gcccgtcggg atcgggcaag acctcgctgc
     2101 tgcgactgct gctgctgtcg ctgaagccga gccgcggcac cgtgcggatg ttcgggcgcg
     2161 acgtcagccg gctggagcag gattcgctgc tcgacatgcg ccggcacatc ggcatcgtgt
     2221 tccaggagtt ccggctgctc gaccatttga cgacgttcga gaacgtggcg ctgccgctgc
     2281 gggtgctcgg ccagccggaa tcgatgtacc gctccaacgt caccgagctg ctcgaatggg
     2341 tggggctggg ggagcggatg gacgcgttgc cgccgctgct gtcgggcggc gaaaagcagc
     2401 gggcggcgat cgcgcgggcg gtcatcggcc ggccggacgt gctgctggcc gacgagccga
     2461 cgggcaatgt cgatccggag ctgtcgctgc ggctggtgcg gctgttcgcc gaactcaaca
     2521 agctgggcac gacgatcatc cttgcgacgc acgaactgcc gctgctcgac agcttcgatt
     2581 ttccgcacat gtcgctgcgc gacggccagg tgagcctcga tggctgaggc gatgctggcg
     2641 gacgcaccgg tcgagagcgc agcgcggccg caggcgacca agcgcaccgc ggcgatcgtc
     2701 ccggagcgca gcgtcgccgg gcggacgctg gtgctgctca tcgccatcat gacgttcctg
     2761 tcgggggtga cgctgggcgg cgtggtgctg gtgcagaaat cggcgatcgc gtggtcgtcg
     2821 gatgtcgggc gcgaggtgac gatccagatc cggccgatcg aaggtgaagt gatggacagc
     2881 aacatccgca ccgcgatcgc gctggcggag gcggtgccgg gggtgagcga cgcccacgcc
     2941 atcagcctcg ccgacagcga gaagctgctc gagccgtggc tcggctccgg cctcgatctc
     3001 agccagctcg agatcccgcg gctgatcgtg gtcgagctcg gcgaccccaa atcggtcgac
     3061 ctcgggcaac tggcgaaggt cctcaccggc atcaaggggg cgacgctcga gacccatgcg
     3121 gcctggcgca accagctcaa caccatggcg ggaacgatcg tgctgtcggg cctgctggtg
     3181 ctggcgctga tcgtcctcgc gacggtgctg gcggtgatct ttgcgacgcg cggaacgatg
     3241 gcatcgaacc gcgagatcgt cgacgtgctg cacttcatcg gcgcctccaa cagcttcatc
     3301 gccggcgaat tccagggccg gttcctgtcg ctggggttcc gcggcgggct ggtcgggggc
     3361 gtcgcggcag tgctgttctt cgtgctcgtc gcctgggcta ccggatcgct ggcgccgagc
     3421 gaggccaatg ccgagctggg gttcctgttc ggccggttct cgctggggtt cgacggcatc
     3481 atcggcatcg cggcagtggt gccggtgatc gcggccctga ccgccatcac ctcgcgactc
     3541 accacgcggc gcttcctgac gcagacctca tgagggcggt gcaggccgtc cgcacggcgg
     3601 tgttctacgc cctgttcctg ggccagacgg tggtgctggc gatcgtggtc gggctgatcg
     3661 ccgtcatctg gcggcggcgc ac
//
LOCUS       DATAZA010000547         2152 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2067600, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000547 DATAZA010000000
VERSION     DATAZA010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2152
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2067600"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..165)
                     /locus_tag="VHZ56_13450"
     CDS             complement(<1..165)
                     /locus_tag="VHZ56_13450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HEX4299021.1"
                     /translation="MAQPVLRFAPSPNGYLHLGHAYSALFTRFWSDRLGGSFLLRLED
                     IDGTRCKPAFA"
     gene            179..841
                     /locus_tag="VHZ56_13455"
     CDS             179..841
                     /locus_tag="VHZ56_13455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012559115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2 family
                     protein"
                     /protein_id="HEX4299022.1"
                     /translation="MSTPVSTERLSSPGALQRQMRALLRRNPALRPIAKAAGAFEIRL
                     TPGGFAGLTRVICGQQLSVASARAIWGRFAVLPGALDPAGYLQLSEAEVRGSGFSAGK
                     FRTVRLVAEAVVEGRLDFATVERLPADAAVAYLTAHKGIGPWTAEIYLMFCSGHPDIF
                     PAGDLALQKAVGHALGMDPAPTAKQLIEIAAPWSPYRHAAALLFWRYYAAVMRKAGGV
                     AL"
     gene            838..1500
                     /locus_tag="VHZ56_13460"
     CDS             838..1500
                     /locus_tag="VHZ56_13460"
                     /inference="COORDINATES: protein motif:HMM:NF014305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX4299023.1"
                     /translation="MTARLSGPMLPPASGGAPRQLMVLLHGYGADGADLIGLARPWQA
                     LWPDMLVVAPNAPDPCALNPAGYQWFPLSGEPIVGRVAGAEAARPVIVQFLEDLWAQS
                     GLGAADTVLGGFSQGAMMALHVGTSLTTRLRAVVAFSGAFPPARDVATGGYAKPPVAL
                     IHGELDRVVDPQLSRDAARELTQLGFDVALHISPGTAHGIAPDGLDFATSFLVAQIPL
                     KA"
     gene            1595..2152
                     /locus_tag="VHZ56_13465"
     CDS             1595..2152
                     /locus_tag="VHZ56_13465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010911702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEX4299024.1"
                     /translation="MTVHVSPESCPALVLNADYRPLSYYPLSLWSWQDAIKAICLDRV
                     QVVSSYDRIVKSPSFEMFLPSVVSLKEYVKPARHPAFTRFNVFLRDRFQCQYCGSRDD
                     LTFDHVIPRSKGGRTTWENVVAACAPCNLKKANRLPREIKMFPSQAPFQPTVHDLHNN
                     GRAFPPNHLHQSWLDYLYWDIELEP"
BASE COUNT          320 a          705 c          770 g          357 t
ORIGIN      
        1 ggcaaaggcg ggtttacagc gggtgccgtc tatgtcttcg agacggagca ggaaactgcc
       61 gccgagccgg tcgctccaga accgggtgaa cagtgccgag tacgcatggc cgagatgcag
      121 atagccattc gggctcgggg caaagcgcag gacaggctgg gccatggggc gctctaacat
      181 gtcaacgccg gtgtcgacag agcggctcag ctcgcccggc gcgctgcagc gccagatgcg
      241 ggcattgctg cggcgcaacc cggccctgcg gccgatcgcg aaagcggcgg gggcattcga
      301 gatccggctg acgccgggcg gctttgccgg cctgacgcgg gtgatctgcg gccagcaatt
      361 gtcggtggcc agcgcccggg cgatctgggg gcgcttcgcg gtgctgccgg gggcgctcga
      421 tccggcgggc tatctgcaat tgagcgaagc cgaggtgcgg ggtagcggct tttcggccgg
      481 caagttccgc accgtgcggc tggtggccga agcggtggtc gaggggcggc tggatttcgc
      541 gacggtggag cggctgccgg ccgacgcggc ggttgcctac ctcacggcgc acaagggcat
      601 cggcccatgg acggcggaga tctacctgat gttctgctcc gggcatccgg acattttccc
      661 ggccggcgac cttgcgttgc agaaggcggt cggccatgcg ttggggatgg accctgcacc
      721 caccgccaag caactgatcg agatcgccgc accatggtcg ccgtatcggc acgccgcggc
      781 gctgctgttc tggcgctact acgccgcggt gatgcgcaag gccggcgggg tggcgctgtg
      841 acggcgcgac tctcgggccc catgctgccg ccggcttccg gcggcgctcc ccggcaactg
      901 atggtgctgc tgcatggcta cggcgccgac ggcgccgacc tcatcggcct cgcccggccg
      961 tggcaggcgc tgtggccgga catgctggtg gtggcgccca acgcgcccga tccgtgcgca
     1021 ctcaacccgg ccgggtacca gtggtttccg ctcagcggcg agccgatcgt ggggcgggtc
     1081 gcgggggccg aggcggcgcg gccggtgatc gtgcagttcc tcgaggacct ctgggcgcag
     1141 agcgggctcg gggccgccga cacggtgctc ggcgggttca gccagggcgc gatgatggcg
     1201 ctgcatgtgg ggacctcgct gaccacgcgg ctgcgggcgg tggtggcgtt ctccggcgct
     1261 tttccaccgg cacgcgatgt cgcgacaggc ggctatgcca agccgccggt ggcgctgatc
     1321 catggcgagc tcgaccgggt cgtcgacccg cagctgagtc gcgacgcggc gcgcgagctg
     1381 acgcagctcg gcttcgatgt ggcgctgcac atctcgccgg gcacggcgca cggcatcgcc
     1441 ccggacgggc tcgatttcgc gacctcgttc ctcgtcgcgc agataccgct caaggcttag
     1501 aattgcaggt gttttggcgc ttcacagcgc cgacacactg catatagtat aagcccgata
     1561 tgcgtaccga cccatcccaa gacgggaggc tcgggtgacc gtccacgtgt cgccggagtc
     1621 gtgtcccgcg ctggtgctga acgccgacta caggccgctc agctactacc cgctgtccct
     1681 ctggtcgtgg caggacgcca tcaaggcgat ctgcctcgac cgggtgcagg tggtgtcgag
     1741 ctatgaccgc atcgtcaagt cgccgagctt cgagatgttc ctgccgagcg tggtgtcgct
     1801 caaggaatat gtgaagccgg cgcggcatcc ggcgttcacc cgcttcaacg tgttcctgcg
     1861 cgaccgcttc cagtgccagt attgcggctc gcgcgacgac ctgacgttcg accacgtaat
     1921 cccgcgctcg aagggcgggc gcacgacgtg ggaaaacgtg gttgcggcct gcgcgccgtg
     1981 caacctcaag aaggccaacc ggctgccgcg cgagatcaag atgtttccct cgcaggcgcc
     2041 gttccagccg accgtgcacg acctgcacaa caatggccgg gcgtttccgc ccaaccacct
     2101 gcaccagagc tggctcgatt atctctactg ggacatcgag ctcgagccgt ag
//
LOCUS       DATAZA010000548         3200 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3348680, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000548 DATAZA010000000
VERSION     DATAZA010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3200
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3348680"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            224..1111
                     /locus_tag="VHZ56_13470"
     CDS             224..1111
                     /locus_tag="VHZ56_13470"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006338488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HEX4299025.1"
                     /translation="MAVPMDQRDGWIWFDGELKAWKDAKVHVLTHGLHYASAVFEGQR
                     AYGGEVFKLREHTDRLINSGKLLDFTIPYSVDEIEAACRLVLEKNNLTDAYMRPIAWR
                     GSEELSVPGRNNKVHLAIASWVWPSYFSVEEKLKGIRLEWSKWKRPSPETIPSHAKAA
                     GLYMICTLSKDAAMANGYADALMLDYRGYVAEATGANVFFVKGDEIHTPDPDCFLNGI
                     TRQTVIGLAKAKGYKVIERHIKPEELANFDECFLTGTAAEITPVSLVGEYSFKPGKAC
                     ETLLNAFNEAVTPKKVAAE"
     gene            complement(1267..1713)
                     /locus_tag="VHZ56_13475"
     CDS             complement(1267..1713)
                     /locus_tag="VHZ56_13475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HEX4299026.1"
                     /translation="MAIRLQAEPFDPGAESNAFLAAAQGAGAAVTFTGLVRSDPRDPI
                     TGLTLECYPELARHQLDDILATAIARFGLLRATIIHRYGTLRPAEPIVQVMTLAPHRR
                     AAFEGAEFLMDYLKTDAPFWKKEATAAGERWVEHRDTDATARARWS"
     gene            complement(1715..1966)
                     /gene="moaD"
                     /locus_tag="VHZ56_13480"
     CDS             complement(1715..1966)
                     /gene="moaD"
                     /locus_tag="VHZ56_13480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin converting factor subunit 1"
                     /protein_id="HEX4299027.1"
                     /translation="MKILYFAWLRERLDRGEEEVSPPSSVATVADLIAWLRERDPAAD
                     LALARPQIIRAAVDARLVPHSASLVGARVVALFPPMTGG"
     gene            complement(1963..2532)
                     /gene="pgsA"
                     /locus_tag="VHZ56_13485"
     CDS             complement(1963..2532)
                     /gene="pgsA"
                     /locus_tag="VHZ56_13485"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003610489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEX4299028.1"
                     /translation="MALPAPLRQLPTQLTVARIVAVPVLCLFIAIDVGWLRWLALLIY
                     VAAAITDWLDGYLARRMNMQSDLGRMLDPIADKLLVGLLIVTFAFTRDFSGLDLVPAL
                     AILFREIFISGLREFMGKREISVPVTFLAKWKTTAQLVALFFTILGGLLPDFWIISSI
                     LLWVAGILTVWTGWQYLVSVWPYFSAPTP"
     gene            2622..2837
                     /locus_tag="VHZ56_13490"
     CDS             2622..2837
                     /locus_tag="VHZ56_13490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299029.1"
                     /translation="MTGTADRPKKPATAPAFKDRQKPGPGDAEVQIRPAGPDGMRDVP
                     KRQWKPEDEASDESFPASDPPAANRFD"
     gene            complement(2834..>3200)
                     /locus_tag="VHZ56_13495"
     CDS             complement(2834..>3200)
                     /locus_tag="VHZ56_13495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015339113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HEX4299030.1"
                     /translation="GQVPNFDAGSVEAAAAEAVRSGIAPAIMIDASHANSSKRPENQP
                     LVVADVAAQVAAGDRRIIGVMIESNLVAGRQDLVPGKPLVYGQSITDGCIGWDTTVEV
                     LEQLADAVAARRQRTAKVA"
BASE COUNT          581 a          948 c         1222 g          449 t
ORIGIN      
        1 aacagcccca tgacgtcgag cggcatgggc ggcatcgaag cccggtccgg atttatgtca
       61 gctatgttga catttatttt gccgggtgcc attgtggtcc catcaagagt gcgtacgaga
      121 cttatcccaa agcggtcccg gtttgccaag gccgggtcgg gggtgcagga tcgacgcagg
      181 gtggcggcct tgcgagggcc ggaaagggat agcggaggcg acgatggcag ttccgatgga
      241 ccagcgcgac ggctggatct ggttcgatgg cgagctcaag gcgtggaaag acgccaaggt
      301 gcacgtgctg acgcacgggc tgcactatgc gagcgcggtg ttcgaggggc agcgcgccta
      361 tggcggcgaa gtcttcaagc tgcgcgagca caccgaccgg ctgatcaatt cgggcaagct
      421 gctcgacttc accatcccgt actccgtcga cgagatcgag gcggcgtgcc ggctggtgct
      481 ggaaaagaac aatctcaccg atgcctatat gcgccccatc gcgtggcgtg gctcggagga
      541 gctcagcgtt ccgggacgca acaacaaggt gcacctggcg atcgcgagct gggtgtggcc
      601 gtcgtatttc tcggtcgagg aaaagctcaa gggcatccgg ctcgagtgga gcaagtggaa
      661 gcgcccgagc cccgagacca tcccgtcgca cgccaaggcg gccggcctct acatgatctg
      721 cacgctcagc aaggatgcgg cgatggccaa tggctatgcc gacgcgctga tgctggacta
      781 tcgcggctac gtggccgagg cgacaggcgc caatgtgttc ttcgtcaagg gcgacgaaat
      841 ccacacgccg gaccccgact gcttcctcaa cggcatcacc cggcagacgg tgatcgggct
      901 ggccaaggcg aagggctaca aagtcatcga gcggcacatc aagccggaag agctggccaa
      961 tttcgacgag tgcttcctga cggggacggc ggcggagatc acgccggtct cgctggtggg
     1021 cgaatattcg ttcaagccgg gcaaggcgtg cgagacactg ctcaatgcgt tcaacgaggc
     1081 ggtgacgccg aagaaggtcg cggcggagta agcgggcgat ccggccggca gtcgagaaac
     1141 cccgccgcga ggcggggttt gcatttgtgg cgatggcttc ggctgccgat cgtcgcaggc
     1201 gcgggtccgg cccaatttgc cgctgttgcg ggcggcgcag accgggcgcc agcgcgctgc
     1261 acgcgatcag ctccagcggg cgcgggccgt ggcgtcggtg tcgcggtgct cgacccagcg
     1321 ctcgccggcg gctgtggctt ccttcttcca gaacggcgca tcggtcttga ggtagtccat
     1381 caggaactcg gcgccctcga aggcggcgcg gcggtgcggc gcgagggtca tcacctggac
     1441 gatgggctcg gcgggccgca gcgtgccgta gcggtggatg atggtggcgc ggaggaggcc
     1501 gaagcgggcg atggcggtgg cgaggatgtc gtcgagctgg tggcgcgcca gctcgggata
     1561 gcattcgagc gtcaggccgg taatgggatc gcgcggatcg gagcgcacga ggccggtgaa
     1621 ggtgacggcg gcgccggcgc cctgcgccgc ggcgaggaag gcgttgctct cggcgcccgg
     1681 atcgaacggc tcggcctgca ggcggatcgc cattctagcc gccggtcatc ggcgggaaga
     1741 gggcgaccac tcgcgcgccg acgagcgaag cggaatgcgg cacgaggcgc gcgtcgacgg
     1801 cggcacggat gatctgcggc ctggcgagcg cgaggtcggc ggcgggatcg cgttcgcgca
     1861 gccaggcgat gaggtcggcg acagtcgcca cggaggaggg cggagacacc tcttcctcgc
     1921 cgcggtcgag gcgttcgcgc agccaggcga aatagaggat cttcacggcg tcggcgcgct
     1981 gaaatacggc cagaccgaga ccaggtattg ccagccggtc cagacggtga ggatgccggc
     2041 gacccacagc aggatggagg agatgatcca gaaatcgggc agcaggccgc cgaggatggt
     2101 gaagaacagg gcgacgagct gcgcggtggt cttccacttg gcgaggaagg tgaccggcac
     2161 gctgatctcg cgcttgccca tgaactcgcg caggccggag atgaaaatct cgcggaagag
     2221 gatggcgagg gcgggcacga gatcgagccc ggagaaatcg cgggtgaagg cgaaggtcac
     2281 gatcagcagg ccgacgagga gcttgtcggc gatgggatcg agcatgcgcc cgaggtcgga
     2341 ctgcatgttc atgcgccggg cgaggtagcc gtcgagccag tcggtgatgg cggcggcgac
     2401 gtagatgagc agcgccagcc agcgcagcca gccgacgtcg atggcgatga acaggcacag
     2461 caccggcacc gcgacgatgc gggcgacggt gagctgggtg ggcaattgcc gaagcggagc
     2521 ggggagggcc atggggcgag ggaacaggaa cggcgccatg gggtcaaggc ggaaccggcg
     2581 gcagcgccag cgggttgaca cccggtcagc ggagggacgc catgaccgga acagccgaca
     2641 gaccgaaaaa gcccgcgacg gcgccggcct tcaaggaccg gcagaagccg ggcccggggg
     2701 acgccgaggt gcagatccgg ccggccggac cggacggcat gcgcgacgtg ccgaagcggc
     2761 aatggaagcc ggaggacgag gcctccgacg agtcctttcc cgccagcgat ccaccggcgg
     2821 ccaaccgctt cgactaggcc acctttgccg tccgctggcg gcgggcggcg acggcgtcgg
     2881 ccagctgctc caacacctcg accgtggtgt cccagccgat gcagccatcg gtgatggact
     2941 ggccgtacac cagcggcttg ccgggcacga ggtcctggcg gccggcgacg agattgctct
     3001 cgatcatgac gccaatgatg cgccgatcgc cggcggcgac ctgggcggcg acgtcggcaa
     3061 cgacgagcgg ctggttttcc gggcgcttgg aggaattggc gtggctcgcg tcgatcatga
     3121 tggcgggggc gatgccggag cgcacggcct cggcggcggc ggcctcgacg ctcccggcgt
     3181 cgaaattggg gacctggccg
//
LOCUS       DATAZA010000549         2130 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1604196, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000549 DATAZA010000000
VERSION     DATAZA010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1604196"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..676)
                     /locus_tag="VHZ56_13500"
     CDS             complement(<1..676)
                     /locus_tag="VHZ56_13500"
                     /inference="COORDINATES: protein motif:HMM:NF017985.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1007 family protein"
                     /protein_id="HEX4299031.1"
                     /translation="MRRLLAAMAAIVLGSLSLPAFAHPHIFVDAQAAVTFDDAGQVVV
                     IHNTWTFDAAYSAWSVQGLDTNNDGKLTRAELQPLADDNMNGLADYEYYTFAGEGKDP
                     NLKFGHGHNATIDMIGDQTTLNFDIPLAQPYGIRKSLELSIDDPEYYVAITFKDASAV
                     KLINAPKNCAVQMQDPKQMPDALADALYALPPDVTKLPPELEQAMRGMQGAIVVNCPG
                     GSLTGKP"
     gene            complement(719..1618)
                     /locus_tag="VHZ56_13505"
     CDS             complement(719..1618)
                     /locus_tag="VHZ56_13505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX4299032.1"
                     /translation="MSQDLARIRAFVQVFDAGGFSAAARQHGRSKALLSKYVTDLEDY
                     LGVRLMNRTTRKLSLTEAGEAYYREASQLLQQLDDLDASILDQTAAPRGLLRVSAARN
                     FGEMILAPAIFAFLAGHPDVTLDLRLEDRFVDLVEEGIDVALRISAAQDSSLIARKIC
                     DMQHAVVASPAYLAAHGTPAVPEELRGHQCIVDTNLQGQANWRFVDRGATVSVHVNGQ
                     VRVNSPLSARDAALAGLGLALLPGYLADPMIASGALVRVLEGYIQTGSSLQAVYPHRR
                     HLAGKVRALIDHLVAWFEAHPVS"
     gene            complement(1669..>2130)
                     /locus_tag="VHZ56_13510"
     CDS             complement(1669..>2130)
                     /locus_tag="VHZ56_13510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX4299033.1"
                     /translation="PGGALASLWGARTLAFSFWGLVIGSIFYSLPFMVQPIRVALEAV
                     GSEPLEAAATLGARRGQIFLRVAAPLARSGFVTGLILTFAHTVGEFGVVLMIGGNIPG
                     QTKVLSISIYDFVERGEWASAHWLSLGMVVFAFIVVTATMLLDRRFGRLTG"
BASE COUNT          375 a          740 c          687 g          328 t
ORIGIN      
        1 cgggcttgcc cgtcaggctg ccgcccgggc aattgaccac gatggcgccc tgcatgccgc
       61 gcatcgcctg ctcgagctcg ggcggcagct tggtcacgtc cggcggcagc gcatacagcg
      121 catcggccag cgcgtcgggc atctgcttgg ggtcctgcat ctgcacggcg caattcttcg
      181 gcgcgttgat cagcttgacc gcgctggcgt ccttgaaggt gatcgccacg tagtactcgg
      241 gatcgtcgat cgacagctcc agcgacttgc ggatgccgta gggctgcgcc agcggaatat
      301 cgaaattcag cgtcgtctgg tcgccgatca tgtcgatcgt ggcgttgtgg ccgtgcccga
      361 acttgaggtt cggatccttc ccctcgccgg caaaggtgta atactcgtag tccgccaggc
      421 cattcatgtt gtcgtcggcg agcggctgca attcggcccg cgtcagcttg ccgtcattgt
      481 tggtgtcgag gccctgcacc gaccacgccg aataagccgc gtcgaacgtc cacgtgttgt
      541 ggatcacgac cacctggccg gcgtcgtcga aggtcaccgc cgcctgcgcg tcgacgaaga
      601 tatgaggatg ggcgaaggcc ggaagcgaaa gcgatccgag aacgatcgcg gccatcgcag
      661 caagcagacg acgcattccg caggccccca tacccgaacc gctcgccaaa accctgttct
      721 agctcacggg gtgggcttcg aaccacgcca ccaggtgatc gatcagggcc ctgaccttgc
      781 cggccagatg tctgcggtgc gggtacacgg cctgcaggct cgagccggtc tggatgtatc
      841 cctccagcac ccggacgagc gctcccgacg caatcatcgg atcggcgagg tagccgggca
      901 ataaggcgag cccaaggccg gccagcgccg cgtcccgcgc cgagagcggc gaattgacgc
      961 gcacctgccc gttcacgtgc accgagactg tcgccccccg gtcgacgaac cgccagttcg
     1021 cctgcccctg cagattggtg tcgacgatgc actggtggcc gcgcagctcc tccggaacgg
     1081 ccggggtgcc gtgcgcggcg agataggcgg gtgacgccac gacggcgtgc tgcatgtcgc
     1141 agatcttgcg cgcgatcagc gacgaatcct gcgccgcgct gatccgcagc gccacgtcga
     1201 tcccctcctc gacgaggtcg acgaagcggt cttcgagccg cagatcgagc gtcacgtcgg
     1261 ggtggcccgc gaggaacgca aagatcgccg gagcgaggat catctcgcca aaattgcgcg
     1321 ccgccgagac ccgcagcagg ccgcgcggcg ccgccgtctg gtcgaggatc gaggcatcga
     1381 ggtcatcgag ctgctgcagc agctggctgg cttcgcgata atacgcctcg ccggcttccg
     1441 tcaggctgag cttgcgggtc gtgcggttca tcagccggac gccgagatag tcctcgagat
     1501 cggtgacgta cttgctcagc agcgccttgg accgcccatg ctgccgcgct gccgcggaga
     1561 acccgcccgc gtcgaacacc tgcacgaagg cgcggatgcg cgccagatcc tgggacatgg
     1621 ccaatcgata caccgatcgc gccccggcga acaatcgccg cccggggttt atcccgtgag
     1681 ccgcccgaac cgccggtcga gcagcatggt cgccgtcacc acgatgaagg cgaacaccac
     1741 catgccgagc gacagccagt gcgcactcgc ccactcgccg cgctcgacga aatcgtagat
     1801 cgagatcgac agcactttcg tctggccggg aatgttgccg ccgatcatca gcactacccc
     1861 gaactcgccg acggtgtggg cgaaggtgag gatcagcccg gtgacgaagc cgctgcgcgc
     1921 cagcggcgcc gctaccctga ggaagatctg gccgcgccgc gcccccagcg tcgccgcggc
     1981 ttcgagcggc tcgctgccca ccgcctcgag cgccacccgg atcggctgca ccatgaatgg
     2041 cagggagtaa aagatcgagc cgatcaccag cccccagaat gaaaacgcca gcgtccgcgc
     2101 gccccacagc gacgccagcg cgccacccgg
//
LOCUS       DATAZA010000550         2001 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3581347, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000550 DATAZA010000000
VERSION     DATAZA010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2001
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3581347"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..236)
                     /locus_tag="VHZ56_13515"
     CDS             complement(<1..236)
                     /locus_tag="VHZ56_13515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003578311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citramalate synthase"
                     /protein_id="HEX4299034.1"
                     /translation="MSKDRLYLFDTTLRDGAQTAGIEFSLEDKIRIAALLEEIGVDYI
                     EGGYPGANPVDDAFFAVPRTSRATFTAFGMGKRSG"
     gene            complement(355..852)
                     /locus_tag="VHZ56_13520"
     CDS             complement(355..852)
                     /locus_tag="VHZ56_13520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020809114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX4299035.1"
                     /translation="MNDNGFTGGCQCGAVRFHAAELRDNPHVCYCRMCQKATGNLFAA
                     LVGVRHEHLTWTRGKAAEFDSSDVAARGFCANCGTSLYYRALGGPHVSISIGAFDEPH
                     RVELLYQMGLEGKHPSLLHLDAVEEVGTTEAAEKPADIARVRASNHQHPDHDTEDWSP
                     QPGTA"
     gene            complement(849..1328)
                     /locus_tag="VHZ56_13525"
     CDS             complement(849..1328)
                     /locus_tag="VHZ56_13525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020086176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX4299036.1"
                     /translation="MTDSFTGGCQCGAVRYRVDGPLRHASICNCRMCQKALGNLFGSW
                     AEFAAPVVWTRGRPSVFRSSGNVQRGFCNLCGTPLTYQWGTRNPSITIGSFDRPNDIV
                     PSGEVARDNRHPLLGHVDELAAEPLGTTDEERDILAILSSFQHPDQDTESWTPGGAR"
     gene            complement(1325..>2001)
                     /gene="pip"
                     /locus_tag="VHZ56_13530"
     CDS             complement(1325..>2001)
                     /gene="pip"
                     /locus_tag="VHZ56_13530"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015318545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HEX4299037.1"
                     /translation="ERLRQMVGVERWLVFGGSWGSALGLAYAEKHPDRVSALVLRGIF
                     TLRRWELEWYYQHGASLVFPDKWERFVAPIPVAERGDMIAAYRRRLTGDDRAEQLRAA
                     KAWAQWEGETITLLPDAAVSGAFYDPDYALAFARIENHYFVHAGWMDEGQLLRDAHRL
                     KAIPAVIVHGRYDMACPASIAWDLHRAWPEAEFHLVEGAGHAYSQPGILHHLVEATDR
                     FAEGGR"
BASE COUNT          318 a          614 c          752 g          317 t
ORIGIN      
        1 ccgctgcgct tgcccatgcc aaaggcggtg aaggtggcgc ggctggtgcg cggcacggcg
       61 aagaacgcgt cgtcgaccgg gttcgcaccg ggatagccgc cctcgatgta gtcgacgccg
      121 atctcttcga gcagcgcggc aatgcggatc ttgtcctcga gcgagaactc gatgccggcc
      181 gtctgagcgc cgtcgcgcaa ggtggtgtcg aagagataga ggcggtcctt gctcatcgat
      241 tggctccaga cccggcgacg gagtcctggt gttgtccgtc ctcgggatgt ccgtcccggc
      301 gggcggacgg gcggcgcagg gtggtgtcga agagatcgac gcggttcttg ctcatcacgc
      361 agtacctggc tggggcgacc agtcttcagt gtcgtggtcg ggatgctggt ggttcgaagc
      421 cctgacgcgg gcgatgtccg ccggcttttc ggcggcctcg gtggtgccga cttcctcgac
      481 ggcatcgaga tgcagcagcg agggatgctt gccctcgagg cccatctggt agagcagctc
      541 gacgcggtgc ggctcgtcga aggcgccgat cgagatcgag acatgcgggc cgccgagcgc
      601 gcgatagtag agcgaggttc cgcaattggc acagaagccg cgcgccgcga cgtcggagct
      661 gtcgaactcg gcggccttgc cgcgggtcca ggtcaggtgc tcgtggcgga cgccgaccag
      721 cgcggcaaag aggttgccgg tagccttctg gcacatgcgg caatagcaga catgcggatt
      781 gtcgcgcagc tcggcggcgt ggaaccgcac cgcgccgcac tggcagccgc cggtgaaacc
      841 attgtcgttc atcgcgcgcc tccgggggtc cagctctcgg tgtcctggtc gggatgctgg
      901 aaggagctga ggatggcgag gatatcgcgc tcctcgtcgg tcgtgccgag cggttcggcg
      961 gcaagctcgt cgacgtggcc gaggagcgga tggcggttgt cacgcgccac ctcgccgctc
     1021 ggcacgatat cgttgggacg atcgaacgag ccgatggtga tcgacggatt gcgggtgccc
     1081 cactggtagg tcaagggcgt gccgcacaga ttgcagaagc cgcgctgcac gttgccggag
     1141 gagcggaaga cgctcgggcg gccgcgcgtc cacaccaccg gcgcggcgaa ttcggcccac
     1201 gagccgaaga ggttgccgag cgccttctgg cacatgcggc aattgcagat ggaggcgtga
     1261 cggagcgggc cgtcgacgcg gtagcgcacg gcgccgcact ggcaaccgcc ggtgaaactg
     1321 tcggtcatcg gccgccctcc gcgaaacggt cggtggcctc gaccaggtgg tgcaggatgc
     1381 cgggttgcga gtaggcgtgg ccggcgccct cgacgagatg gaactcggcc tcgggccagg
     1441 cgcgatgcag gtcccaggcg atcgaggccg ggcaggccat gtcgtagcgg ccatggacga
     1501 tgacggcggg aatggccttc agcctgtggg cgtcgcgcag caactggcct tcgtccatcc
     1561 agccggcgtg gacgaaatag tggttctcga tgcgggcgaa ggcgagcgcg taatcgggat
     1621 cgtagaaggc gccggacacc gcggcgtcgg gcagcagggt gatggtctcg ccttcccact
     1681 gcgcccaggc tttggccgcg cgcagctgct cggcgcggtc gtcgccggtg aggcggcggc
     1741 gataggcggc gatcatgtcg ccgcgctcgg cgacggggat cggcgcgacg aagcgttccc
     1801 atttgtcggg gaagaccagc gaagctccgt gctggtagta ccattcgagt tcccagcggc
     1861 ggagggtgaa gataccgcgc agcaccagag cggagacccg gtcggggtgc ttttcggcgt
     1921 aggcgagccc tagcgccgaa ccccatgagc cgccgaacac cagccagcgc tcgacgccga
     1981 ccatctggcg cagccgctcg a
//
LOCUS       DATAZA010000551         1719 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2882626, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000551 DATAZA010000000
VERSION     DATAZA010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2882626"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..766
                     /locus_tag="VHZ56_13535"
     CDS             <1..766
                     /locus_tag="VHZ56_13535"
                     /EC_number="5.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019856763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047472 - 3-carboxy-cis,cis-muconate
                     cycloisomerase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3-carboxy-cis,cis-muconate cycloisomerase"
                     /protein_id="HEX4299038.1"
                     /translation="HVHFGATSQDVIDTALILRLRPMLAEFQRRIEAMVTALANLDRR
                     FGTNAIMGRTRMQDALPIRAADRIASWRGPLQRDLDRLAELSPRLLVLQFGGAVGTLD
                     KLGDKAQAVAARLADGLDLRLPDHAWHNQRDGLVELAGWLSLVSGSLGKIGADVALMA
                     QNSVNEIALDGTGGSSAMPHKANPVAAEVLVALARYNATLVGGMHGALVHEQERSGAA
                     WTLEWLVLPQMLMTTAAGLRTGLALAGQVTRLGRGG"
     gene            766..>1719
                     /gene="pobA"
                     /locus_tag="VHZ56_13540"
     CDS             766..>1719
                     /gene="pobA"
                     /locus_tag="VHZ56_13540"
                     /EC_number="1.14.13.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016737146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018659 - 4-hydroxybenzoate
                     3-monooxygenase activity [Evidence IEA];
                     GO_process: GO:0018874 - benzoate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate 3-monooxygenase"
                     /protein_id="HEX4299039.1"
                     /translation="MRTQVAIIGAGPAGLLLGQLLTGAGIDNVILERSSAAHVLGRIR
                     AGVLEEGTVRMLEAAGCAGRVHAEGLVHEGIDIAFAGRRHRIDLKAHSGGKVVTVYGQ
                     TEVTRDLMEARAAAGAASIYEASEVTLHEFGGGAPSVTFTAGGTAQRLDCDFIAGCDG
                     FHGASRASLPADALTTFERVYPFGWLGVLADVPPAAEELIYANHPRGFALCSMRSRTR
                     SRYYVQVGADERVEAWSDAAFWDELRRRLPEEAAAQVTTGPAIEKSIAPLRSFVAEPL
                     RFGRLFLCGDAGHIVPPTGAKGLNLAASDAHYLFEGLREHYG"
BASE COUNT          241 a          582 c          650 g          246 t
ORIGIN      
        1 ccatgtgcat ttcggggcca ccagccagga cgtcatcgac accgcgctga tcctgcggct
       61 gcggccgatg ctggcggagt tccagcggcg gatcgaggcc atggtcacgg cgctggccaa
      121 tctcgaccgg cggttcggca cgaacgcgat catggggcgg acgcggatgc aggacgccct
      181 gccgatccgg gccgccgacc gtatcgccag ctggcgtggg ccgctgcagc gcgatctcga
      241 ccggctggcg gagctgtcgc cgcgcctcct ggtgctgcag ttcggtggcg ccgtggggac
      301 gctcgacaag ctcggcgaca aggctcaggc cgtcgcggcg cggcttgcgg acgggctcga
      361 tctccgcctg ccggatcacg cctggcacaa ccagcgcgac ggcctcgtcg agctggccgg
      421 ctggctgtcg ctggtcagcg gcagcctcgg caagatcggt gccgacgtcg cgctgatggc
      481 gcagaacagc gtcaacgaga ttgcactcga cggaacgggc ggctcgtcgg ccatgccgca
      541 caaggccaat ccggttgccg ccgaggtgct ggtggcgctg gcgcgctaca atgccacgct
      601 ggttggcggg atgcatggcg cgctggtgca cgagcaggag cggtccggcg ccgcctggac
      661 gctcgagtgg ctggtgctgc cgcaaatgct gatgaccacc gctgccggac tgcgcacggg
      721 cctggccctc gccgggcagg tcacgcgcct cggacgcggc ggctgatgcg cacgcaggtg
      781 gcgatcatcg gggccggtcc ggcgggcctg ctgctcggac aattgctcac cggcgcgggc
      841 atcgacaatg tgatcctcga acggagctcg gccgcgcacg tcctcggccg catccgcgcc
      901 ggcgtactcg aagaggggac ggtgcggatg ctggaggcgg cgggctgcgc cggccgggtg
      961 cacgccgaag gcctggtgca cgagggcatc gacatcgcgt ttgccggccg ccgccaccgc
     1021 atcgacctca aggcgcattc gggcggcaag gtggtgacgg tctacggcca gaccgaggtc
     1081 acccgcgacc tgatggaggc gcgggcggcc gccggggcgg ccagcatcta cgaggcgagc
     1141 gaggtgacgc tgcacgagtt cggcggcgga gcaccgtcgg tcaccttcac cgccggagga
     1201 acggcgcagc ggctcgattg cgacttcatc gccggctgcg acggctttca cggagcaagc
     1261 cgggccagcc tgcccgcgga cgcgctgacg accttcgagc gggtctatcc gttcggctgg
     1321 ctgggggtgc tggccgacgt gccaccggcg gccgaggagt tgatctacgc caaccatccg
     1381 cgcggcttcg cactctgctc gatgcggtca cggacgcgca gccgctatta cgtgcaggtg
     1441 ggcgcggacg agcgggtcga ggcctggagc gacgccgcct tctgggacga actgcgccgg
     1501 cgcctgcccg aggaggcagc ggcgcaggtg acgaccggcc cggcgatcga gaagtcgatc
     1561 gcgccgctcc gctcgtttgt cgccgagccg ctgcgcttcg gccgattgtt cctctgcggc
     1621 gacgccgggc acatcgtgcc gccgacgggg gccaaggggc tcaacctcgc ggcgagcgac
     1681 gcgcactatc tgttcgaggg gctgcgcgag cactatggc
//
LOCUS       DATAZA010000552         2894 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2651047, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000552 DATAZA010000000
VERSION     DATAZA010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2894)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2894
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2651047"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..550
                     /locus_tag="VHZ56_13545"
     CDS             <1..550
                     /locus_tag="VHZ56_13545"
                     /inference="COORDINATES: protein motif:HMM:NF019844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0070064 - proline-rich region binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEX4299040.1"
                     /translation="TISHNDLLASTFAVLKVDLRSPAAVAAVTTPAVAGADDGTLTTR
                     VVKTTQIRVSPAGDVSVAEATPAQDPGAAPAPLTAGLPIAAAATPKVAAIAVAKPAAA
                     VVAPVKVASVAPVTGGSSAVVRGAGANVRSSPSRQDGSVLFALAGGDKVKVLEDHRGW
                     LHVVDSRGRSGWIYQDFISMHG"
     gene            complement(574..999)
                     /locus_tag="VHZ56_13550"
     CDS             complement(574..999)
                     /locus_tag="VHZ56_13550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX4299041.1"
                     /translation="MRVADYSIGELSAETGVKIPTIRYYEGVGLIDPPPRSAGNQRRY
                     GEAARERLRFIAHARSMGFPMGSLRAMLRIAGHRDAPCADLDALVRGRLAEVDERIAR
                     LTALRAELSSMLADSRHGTVGECRVVEVLSDHAECTHPH"
     gene            1084..1740
                     /locus_tag="VHZ56_13555"
     CDS             1084..1740
                     /locus_tag="VHZ56_13555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009466621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEX4299042.1"
                     /translation="MSAGHDHAHSFDGLNDDYKRRLMVVMAINIAMFCIEMSAGQAAG
                     SQALKADALDFFADGVTYALSFWVIGRAMRVRTGAAVVKGVSLLLMGLWVGLTTLYQF
                     FVQGVPEPEVMGAIGFVALAANLLSVYLLWAYKDGDANIRSVWLCSRNDAIGNVAVMI
                     AAGLVVVLQSGAPDLIVAGVMAALFLSSSYQILTQSWREWRTGGAHDHEHDGHEHEGH
                     "
     gene            1740..2222
                     /locus_tag="VHZ56_13560"
     CDS             1740..2222
                     /locus_tag="VHZ56_13560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299043.1"
                     /translation="MRWMLAALVLAASPALGDDWGHYASARFGYGVDVPPGFVAQGES
                     ANSDGETFRTPTATLSVYGATVGKGDFEAAVKQSEATDKGEGWSITYQAVTPRNASYS
                     GRKGGRVLYVRMIALCGGRQFAAGAIEYGVADLKAFDPVVNRLAKSLQVAGTGTDCSH
                     "
     gene            complement(2219..>2894)
                     /locus_tag="VHZ56_13565"
     CDS             complement(2219..>2894)
                     /locus_tag="VHZ56_13565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HEX4299044.1"
                     /translation="ALRLSQRRDLAGVVDAAAEPAPLSHGARLVAIGLAATAIVLLVA
                     SGLGWPLGLPTFACGVVVAATTLLVSRRAPWPVLRHISWGVLPLVAGLFILVEALDRT
                     GVIGRLGDLLKAAAASSVPWTAAVAGLAVAIGTNLVNNLPLGLVAASASHAAAVPVPV
                     TNALLVGIDLGPNLSVTGSLATILWLIALRREGIDIGAWRFLRVGAVVMLPALVLALG
                     AVLLLA"
BASE COUNT          463 a          903 c         1152 g          376 t
ORIGIN      
        1 gacgatcagc cacaacgatc tgctggcctc gaccttcgcg gtgctgaagg tcgacctcag
       61 gagcccggcg gccgtggccg ccgtcacgac gccggcagtg gccggcgcgg atgacggcac
      121 actgacgaca cgagtggtga agacgacgca gatccgggtg tccccggccg gcgatgtcag
      181 cgtggcggaa gcgacgccgg cacaggaccc gggcgcggcc cctgccccgc tcacggccgg
      241 cctgccgatc gccgcagcgg caaccccgaa ggtggcggcg atcgcggtgg ccaagccggc
      301 cgcagcggtg gtggcaccgg tcaaggtggc gtcggttgcg ccggtgacgg gcggttccag
      361 cgcagtggtg cgcggcgccg gcgccaatgt ccgctcgagc ccatcgcggc aggacggcag
      421 cgtgctgttc gcgctcgccg gcggcgacaa ggtgaaggtg ctcgaggacc atcgcggctg
      481 gctgcacgtg gtcgattccc gcggccggag cggctggatc taccaggact tcatcagcat
      541 gcatggctga gcgcaggcga accgcccggc gactcagtgc gggtgggtgc actcggcgtg
      601 atcggacagc acctcgacga cacgacactc gccaacggtg ccgtgccggg aatcggcgag
      661 catcgaggag agctcggccc gcagcgccgt gaggcgggcg atgcgctcgt cgacctcggc
      721 caggcggccg cgaaccaggg cgtcgaggtc ggcgcagggc gcgtcgcggt ggccggcgat
      781 gcgcaacatg gcgcgcagcg agcccatcgg aaagcccatg gagcgggcgt gggcgatgaa
      841 gcgcagccgc tcgcgggcgg cctcgccgta gcggcgctgg ttgccggcgc tgcgcggcgg
      901 cgggtcgatg agcccgacgc cctcgtagta gcggatggtg gggatcttca ccccggtttc
      961 ggcgctgagt tcaccgatcg aatagtctgc aacgcgcatg gcagcctccc cggcggggcc
     1021 ttgaacctct agtcactaga ggacctatgt aggctgcgac cgaggtgatt cataggctcg
     1081 cggatgagcg ccggacacga ccacgcccac agcttcgacg ggctcaacga cgactacaag
     1141 cgccggctga tggtggtgat ggcgatcaat atcgccatgt tctgcatcga gatgagtgcc
     1201 ggccaggcgg cgggatcgca ggcgctcaag gccgacgcgc tggatttctt cgccgatggg
     1261 gtgacctacg cgctgagctt ctgggtgatc gggcgcgcca tgcgggtgcg caccggcgcg
     1321 gcggtggtca agggcgtaag cctgctgctg atggggctgt gggtggggct gacgacgctc
     1381 taccagttct tcgtccaggg cgtgccggag ccggaggtga tgggcgccat cggcttcgtg
     1441 gcgctggccg ccaacctgct gtcggtctac ctgctgtggg cctacaagga cggcgacgcc
     1501 aacatccgct cggtgtggct gtgctcgcgc aacgacgcga tcggcaatgt ggcggtgatg
     1561 atcgcggcag ggctggtggt ggtgctgcag agcggcgcgc cggacctgat cgtcgccggg
     1621 gtgatggcgg cgctgttcct cagttcgtcc taccagatcc tgacgcagag ctggcgcgag
     1681 tggcggacgg gcggcgcgca cgaccacgag catgacgggc acgagcacga ggggcactga
     1741 tgcggtggat gcttgcagcg ctggtgctgg cggcgagccc ggcgctgggc gacgactggg
     1801 ggcactatgc gagcgcgcgc ttcggctacg gggtcgacgt gccgccgggg ttcgtggcac
     1861 agggcgagag cgcgaacagc gatggcgaga cgttccggac gccgacggcg acgctcagcg
     1921 tctacggcgc gactgtcggc aagggcgact tcgaggcggc ggtgaagcaa agcgaagcca
     1981 ccgacaaggg cgagggctgg tcgatcacct accaggcggt gacgccgcgc aacgcgagct
     2041 attcggggcg caagggcggc cgggtgctgt atgtgcggat gatcgcgctc tgcggcggca
     2101 ggcagttcgc ggccggcgcg atcgagtacg gcgtcgccga tctcaaggcg ttcgacccgg
     2161 tggtcaaccg gctggccaaa tcgctgcagg tcgcgggcac cggcaccgac tgctcgcact
     2221 aggcgaggag caggaccgcg cccagcgcca ggacgagcgc cggcagcatg accacggcgc
     2281 cgaccctgag gaagcgccag gcgccgatgt cgatgccttc gcggcggagt gcgatcagcc
     2341 aaaggatggt ggcgagcgag ccggtgaccg acaggttggg accgagatcg atgccgacca
     2401 gcagcgcatt ggtgacgggg acgggcacgg cggcggcgtg actggccgag gcggcgacga
     2461 ggccgagcgg caagttgttg acgagattgg tgccgatggc gacggcgaga ccggcgaccg
     2521 ccgcggtcca ggggacggag ctggcggcgg cggccttgag cagatcgccg aggcggccga
     2581 tgacaccggt gcggtcgagc gcttcgacga ggatgaagag gccggcgacc agcggcagca
     2641 caccccacga gatgtgccgg agcaccggcc acggggcacg gcgcgagacg aggagcgtcg
     2701 tggcggcgac gacgacgccg caggcgaagg tgggcaggcc gagcggccag ccgaggcccg
     2761 aggcgacgag caggacgatc gccgtggcgg cgaggccgat ggcgacgagg cgggcgccgt
     2821 ggctgagcgg agccggctcc gcagcggcgt cgacgacacc cgcaagatcg cgccgctggc
     2881 tgaggcgcag ggcg
//
LOCUS       DATAZA010000553         5837 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1144167, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000553 DATAZA010000000
VERSION     DATAZA010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5837
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1144167"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(136..2796)
                     /locus_tag="VHZ56_13570"
     CDS             complement(136..2796)
                     /locus_tag="VHZ56_13570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX4299045.1"
                     /translation="MRVDADWIKSATARRILVHWADARPAWLWSHDGSTLLWRNAAAR
                     FFNGKLKKSGLKLSPEAVPIKGQVSRLIRLGAVGRSSLSRVQFLAGDKPVSTTCSCTP
                     LTLADGDTALLLVGIDAVDAELLATAADRPADAMTEALLPPGVDYLVLSGGRVVGGSA
                     PALAARSADPDAALPDGDAVVRIKVGADDSELVLLTAAASPVSAIATIRAEEGVSADE
                     SAHVATDDLADVPEPMLPMGLAPSPAMAAPPAAADQWVEPLPPAEDERALSSLFDRLA
                     EDAELYSPLTEADETFAGPGEVATAPEPEDRPEPSPAPEAAPPLDPDLIATVIEYADD
                     PEHTDAPHHEPSSQWMITGRGFRRYDPPVAAEPPLPAETVDAAPDAEAAERVSRYNFE
                     ELGRILTDRVSGEPGPRIEPEPAIEPRPPEGVINLNAETLVLNRLPLAILVFRDQQVL
                     FANRALTELLGHDSVESLRAAGIASIFPGAEETNAGPVNRLVRRDGQPLPVAARLQSV
                     SWQGRAALMLSAAPGEPVRGHEAAVRAFAEIAAEAREEGFLAADRAGIVTQLSGHGSV
                     LLGRAAADVTGKPLVVLVSKADMEPLRQFLERPARFAETARPSLAAASDDGETEITLF
                     AEGQAGVVTGYFGFLRKRTRPIPRPASEDEVEPSMLARLSRGIRRPLNTIIGFADLIR
                     AAPGPGEAGRHVEYARDIRTAGLEIAVLADELDDFTRLRDGRYAPRPSDVDLQALLES
                     CVLRVRSQAGAARVLVRSAISERLPRIRADGASLGQALLNLLASAIDQTPIGGSVILS
                     AQAEEDGSIAIHVRDGAQTSSDLGERFVVFRDGVDKDGEQLGPVRSSVGLALTRSLLA
                     VNACSLSVDPMAGVGTLFSLLIPADLVAKG"
     gene            3010..3086
                     /locus_tag="VHZ56_13575"
     tRNA            3010..3086
                     /locus_tag="VHZ56_13575"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3044..3046,aa:His,seq:gtg)
     gene            3177..3494
                     /locus_tag="VHZ56_13580"
     CDS             3177..3494
                     /locus_tag="VHZ56_13580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299046.1"
                     /translation="MRRNWRRASVARRMVGAAYNTGMVATLGAGLVVLFTAAALLFDW
                     INTQVFEMPVLWTGAVLTVIIASIGTVLVVPAVIFGWVPAANPEPEVEADDSPVTNWE
                     SEP"
     gene            complement(3491..4420)
                     /gene="pcaQ"
                     /locus_tag="VHZ56_13585"
     CDS             complement(3491..4420)
                     /gene="pcaQ"
                     /locus_tag="VHZ56_13585"
                     /inference="COORDINATES: protein motif:HMM:TIGR02424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001228 - DNA-binding transcription
                     activator activity, RNA polymerase II-specific [Evidence
                     IEA];
                     GO_process: GO:0019619 - 3,4-dihydroxybenzoate catabolic
                     process [Evidence IEA];
                     GO_process: GO:0045893 - positive regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pca operon transcription factor PcaQ"
                     /protein_id="HEX4299047.1"
                     /translation="MSVLLDPRIKLRHLTAFLEVVRQGGVARAGAELGMTQPAVSKSI
                     GELEDILGLALFDRSRRALALTADGEMFARFCQAGLATLRQGLDTLAEAKGGASLVAF
                     GALPTVAAGVVPRALKRFAASPLACRCLVESGPSPYLLELLRTAAIDFVVGRLANPPA
                     MDGLSFEHLYSEQLALVVRPGHPLAAVEPLELRALDGLQLLLPPRQAIIRPAVDALLI
                     AGGLDHSGAEIETVSNSLGRSYVLMSDAVWIISSGVVAADVAAGQLLRLPLDTSASKG
                     AIGITTRSGAELPLATRALLQCVRDAAAGSLAA"
     gene            4511..5359
                     /locus_tag="VHZ56_13590"
     CDS             4511..5359
                     /locus_tag="VHZ56_13590"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEX4299048.1"
                     /translation="MAEFLSLRDAIARNLHDGDTVAFEGFTHLIPHAAAHEAIRQGIK
                     DLTLIRMTPDIIYDQMIGMGLAKKVVFSYAGNPGVGLLRRMRDAIENNYPRPIETVEH
                     SHSAMAQAYEAGASGLPCAIFRGYKGADLPRVNPEIRTVTCPFTGEELAAVPAHRPDV
                     AIIHAQKASGRGDVLVEGIIGVQKEAALAARRVVVTVEEVVPDFRGLHPNLTILPHWT
                     IDAVAVVPGGAHPSYTHGYYQRDNAAYLDWDRISADRELFAGWMEANVLAVGPEVFAQ
                     RVERLR"
     gene            5356..>5837
                     /locus_tag="VHZ56_13595"
     CDS             5356..>5837
                     /locus_tag="VHZ56_13595"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019861934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEX4299049.1"
                     /translation="MTDFTPTEMMTIAAARALKNDDVCFVGIGAPSAACNVARLTHAP
                     GITLIYESGTIGTAPDVLPLSIGDGELCETALCTVSVPEMFRYWLMGGRVSIGFLGAA
                     QLDRFGNINTTVIGDYAHPKVRLPGGGGAPEIATSCGEIFITLKQAQRAMVNKIDFFT
                     S"
BASE COUNT          908 a         2112 c         1956 g          861 t
ORIGIN      
        1 ggccgccggg agcgcccggg cccacgccgg agcgacgaaa catcaacggg ttatcccagg
       61 gtgggagtgc aaccgggaaa ctgtaaaggg gaacggcgag gatgccaatt cgccgggagg
      121 gcttttcggc gccgctcagc cctttgccac aagatcggca gggatcagca gcgaaaacag
      181 cgttccgacc ccggccatcg gatcgaccga cagcgaacag gcgttgaccg ccagcagcga
      241 gcgcgtcagc gccagcccga cgctcgaacg caccggcccc aattgctcgc cgtccttgtc
      301 gacgccgtcg cggaacacca cgaagcgctc gccgaggtcg ctgctggtct gcgccccgtc
      361 gcggacatgg atggcgatgc tgccgtcctc ctcggcctgc gccgacagga tcaccgagcc
      421 gccgatcggc gtctggtcga tggcgctcgc caaaaggttc agcaaggcct gcccgagcga
      481 cgcgccgtcg gcgcggatcc gcggcaggcg ctcggaaatg gcgctccgga ccagcacccg
      541 tgccgcaccg gcctggctgc gcacccgcag cacgcacgat tcgagcagcg cctgcaggtc
      601 gacgtccgac ggccgcgggg cgtagcgccc gtcgcgcagc cgcgtgaagt cgtcgagctc
      661 atcggccagc accgcgattt cgaggcccgc cgtgcggatg tcgcgcgcat attcgacgtg
      721 ccgcccggcc tcgcccggac ccggcgcggc gcggatcagg tcggcgaagc cgatgatggt
      781 gttgagcggc cggcggatgc cgcggctcag ccgggccagc atcgagggct cgacctcgtc
      841 ctcgctggcc gggcgcggga tcggccgggt gcgcttcctg aggaacccga aatagccggt
      901 gaccacgccg gcctgcccct cggcaaacag cgtgatctcg gtctcgccgt cgtcgctggc
      961 ggccgccagg ctcggccggg ccgtctcggc aaagcgcgcc ggccgctcga gaaactgccg
     1021 cagcggttcc atgtcggcct tgctcaccag caccaccagc ggcttgccgg tcacatcggc
     1081 ggcggcccgt cccagcagca cgctgccatg cccggacaac tgggtgacga tcccggcgcg
     1141 gtcggcagcg aggaaaccct cctcgcgcgc ttcagccgcg atctcggcga aggcccgcac
     1201 tgccgcctcg tggccgcgca ccggctcgcc cggcgccgcc gacagcatca gcgctgcgcg
     1261 gccctgccag ctgaccgatt gcagccgcgc cgccaccggc agcggctggc cgtcgcggcg
     1321 gaccagccgg ttgaccggcc cggcattggt ttcctccgcc cccggaaaga tcgaggcgat
     1381 gccggcggcc cggaggcttt cgacgctgtc gtggccgagc agctcggtca gcgcccggtt
     1441 ggcgaacagc acctgctggt cgcgaaacac caggatggcg agcggcaggc ggttgagcac
     1501 cagcgtctcg gcattgaggt tgatgacgcc ctcgggcggt cgcggctcga tcgccggttc
     1561 gggctcgatc cgtggtccgg gctcgcccga gacgcggtcg gtgaggatgc ggcccagctc
     1621 ctcgaaattg tagcgcgaca cccgttcggc ggcctcggcg tcgggtgccg cgtcgaccgt
     1681 ctcggccggc agcggaggtt ccgcagccac cggcggatcg tagcggcgga acccgcgccc
     1741 ggtgatcatc cactgcgagc tgggctcgtg gtgcggcgcg tccgtgtgct ccggatcgtc
     1801 cgcatactcg atcaccgtgg cgatcaggtc gggatcgagc ggcggcgcgg cctcaggcgc
     1861 gggggagggc tccggtcggt cctccggttc cggcgcagtc gcaacctcgc ccgggccggc
     1921 gaatgtctcg tcggcctcgg tcaatggcga atagagctcg gcgtcctccg ccaggcggtc
     1981 gaacagcgac gacagcgccc gctcgtcttc ggccggcggc agcggctcga cccactggtc
     2041 ggcggccgcg ggcggcgccg ccatcgccgg ggatggcgcc agtcccatcg gcagcatggg
     2101 ttcggggaca tcggcaagat cgtcggtggc cacgtgcgcc gactcgtcgg cgctgacgcc
     2161 ttcctcggcc cggattgtgg cgatggccga aaccggcgag gctgcagccg tcaacagcac
     2221 gagctcgctg tcgtcggcgc ccaccttgat ccggaccacc gcgtcaccgt ccggcagcgc
     2281 cgcgtcggga tcggctgagc gtgccgccag agcgggtgcc gaaccgccga ccacgcggcc
     2341 gcccgacagc accaggtagt cgacgccagg cggcagcagc gcctcggtca tcgcgtcggc
     2401 aggccggtcc gccgctgtcg ccagcaattc ggcgtccacc gcatcgatgc cgaccagcag
     2461 cagcgcggtg tcgccgtcgg ccagggtcag cggcgtgcac gagcaggtgg tcgagaccgg
     2521 cttgtcgccg gcgaggaact gcacccggct gaggctcgag cggccgaccg cgccgagccg
     2581 gatcagccgc gacacctggc ccttgatcgg caccgcctcg ggcgacagct tcagcccgct
     2641 tttcttgagc ttgccgttga agaaccgcgc tgcggcgttg cgccagagca gggtcgagcc
     2701 gtcatgcgac cacagccacg ccggacgtgc atcggcccag tgcacgagga tccgtcgcgc
     2761 cgtcgccgat ttgatccagt cagcatccac gcgcacacac gaccccgaaa ttgtgccgga
     2821 acggcacaat ccgcacccag gacttaatct tgtcctaatt atatcgcggc cggccaacgg
     2881 tccatatttg ctggactttc cggccccggc aaacgtccgg atggttaagt ctgcggggtt
     2941 gcgccctccg cccgctgcgg ctaaaccctg cctgtccgcg ccgcccgccc acgctggcgg
     3001 acgccttggg ccgccttagc tcagctggtt agagcactag attgtggatc taggggtccc
     3061 ccgttcaagc cggggaggcg gtaccaaccc tttattgtcc aatgcctcgg tcgacggacg
     3121 aacgccccgg catcagcgct tttgcttccc ggccccgacg gcctatatga tgccccatgc
     3181 gcaggaactg gcgccgggca tcggtggcgc gccgcatggt cggcgcggcc tacaacacgg
     3241 ggatggtcgc aacgctgggc gcggggctgg tggtcctgtt caccgccgcg gcgctgctct
     3301 ttgactggat caacacccag gtgttcgaga tgcccgtgct gtggacgggc gcggtgctga
     3361 cggtgattat cgccagcatc ggcaccgtgc tggtggtgcc ggccgtgatc ttcggctggg
     3421 tcccggccgc caatccggaa cccgaggtcg aagcagacga ctccccggtc accaactggg
     3481 agagcgaacc ctaggccgcg agggatccgg ccgccgcgtc gcgcacgcac tgcaacagcg
     3541 cccgcgtcgc cagcggcagc tcggcgccgc tgcgggtggt gatgccgatg gcgcccttgc
     3601 tcgcgctggt gtcgagcggc agccgcagca gctgtcccgc ggccacgtcg gcggcaacga
     3661 cgccgctcga gatgatccac accgcatcgc tcatcagcac gtagctgcgg cccagcgaat
     3721 tcgacaccgt ctcgatctcg gcgccgctat ggtcgagccc cccggcgatc agcagcgcat
     3781 ccaccgccgg ccggatgatc gcctgccgcg gcggcagcag cagttgcagg ccgtcgagtg
     3841 cccgcagctc cagcggttcg acggcggcga ggggatggcc cggccgcacc accagcgcca
     3901 gctgttccga atagaggtgc tcgaacgaca ggccgtccat ggccggcgga ttggccagcc
     3961 ggccgaccac gaagtcgatg gcggcggtgc gcagcagttc gagcagatac gggctcggcc
     4021 cgctctcgac caggcaacgg caggccagcg ggctggcggc gaagcgcttc agcgcccgcg
     4081 gcactacccc ggcggccacc gtcggcagcg ccccgaaggc gacaaggctg gctccgccct
     4141 tcgcttccgc cagcgtatcg agcccctgtc gcagcgtcgc gagcccggcc tggcaaaaac
     4201 gcgcgaacat ttcaccgtcc gcagtgagcg ccagcgcccg ccggctgcgg tcgaacagcg
     4261 ccagccccag gatgtcctcg agctcgccga tcgacttcga taccgccggc tgcgtcatgc
     4321 cgagctcggc gccggcccgc gccaccccgc cctggcgcac cacttcgagg aaggccgtca
     4381 ggtgccgcag cttgatgcga gggtccagca acaccgacat caattcctcc aggttatgct
     4441 ttgtcaggga tttatcattt ttatccgcca tttcaccatg cttatatgac cgaaatagat
     4501 ggaaataggt atggccgagt tcctgagcct ccgcgacgcg atcgcccgca acctccatga
     4561 cggcgatacc gtcgccttcg agggcttcac ccacctgatt ccgcacgccg ccgcccacga
     4621 ggcgatccgc cagggcatca aggatctgac cctcatccgg atgacgcccg acatcatcta
     4681 cgaccagatg atcggcatgg ggctggcgaa aaaggtggta ttttcctacg ccggcaaccc
     4741 cggcgtcggc ctcctgcgcc gcatgcgcga cgccatcgag aacaactatc cgcgccccat
     4801 cgagaccgtc gagcactcgc attcggcgat ggcgcaggcg tacgaggccg gcgcgagcgg
     4861 gctgccctgc gcgatcttcc gcggctacaa gggtgccgac ctgcccaggg tcaatccgga
     4921 gatcaggacc gtcacctgcc cgtttaccgg cgaggagctg gcggcggtcc ccgcgcaccg
     4981 gccggacgtg gccatcatcc acgcccagaa ggcgagcggc cgcggcgacg tgctggtcga
     5041 aggcatcatc ggcgtgcaga aggaagccgc gctcgccgcg aggcgtgtcg tcgtcaccgt
     5101 cgaagaggtg gtgcccgact tcaggggcct ccaccccaac ctgaccatcc tgccgcactg
     5161 gaccatcgac gccgtcgcgg tggtgccggg cggcgcccat ccctcctaca cccacggcta
     5221 ctaccagcgc gacaacgccg cctatctcga ctgggacagg atttcggccg accgcgagct
     5281 gttcgcgggt tggatggagg ccaatgtcct ggcggtggga ccggaggtgt ttgcgcaacg
     5341 ggtggagcgc ctgcgatgac cgacttcact cccaccgaga tgatgaccat cgccgccgcc
     5401 cgggcgctga agaacgacga cgtctgcttc gtcggcatcg gcgcaccgtc ggccgcctgc
     5461 aatgtcgccc ggctcaccca tgcccccggc atcacgctga tctacgaatc cggcaccatc
     5521 ggcacggcgc ccgacgtgct gcccctgtcg atcggcgacg gcgaattgtg cgagaccgcg
     5581 ctctgcaccg tcagcgtgcc ggagatgttc cgctactggc tgatgggtgg ccgcgtctcg
     5641 atcggcttcc tcggcgccgc gcagctcgac cgcttcggca acatcaacac caccgtcatc
     5701 ggcgattacg cgcacccgaa agtgcggttg cccggcggcg gcggggcgcc ggagatcgcc
     5761 acctcctgcg gcgaaatctt catcaccctc aagcaggcgc agcgcgccat ggtcaacaag
     5821 atcgacttct tcacctc
//
LOCUS       DATAZA010000554         3184 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_560417, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000554 DATAZA010000000
VERSION     DATAZA010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3184
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_560417"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..146
                     /locus_tag="VHZ56_13600"
     CDS             <1..146
                     /locus_tag="VHZ56_13600"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009374358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HEX4299050.1"
                     /translation="PANLFPNGDTTIEPENRWRSHGHLLFQNWINDIYQTTPFDRTRI
                     GEV"
     gene            complement(157..621)
                     /locus_tag="VHZ56_13605"
     CDS             complement(157..621)
                     /locus_tag="VHZ56_13605"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX4299051.1"
                     /translation="MEQPVVEVETQIDAAPGKVWSALTQAQSPMFMGARMETDWKPGS
                     TYTLKGEWNGNAFTDYGAIETAVPGKELSFTHWSKTPEPPKSYNAVRVRIVPDGSGSR
                     VTLAQLARGEPQSFDDKAKAEFRKNWTMMLEGLKTAAEAEAEAEAEAEAEGK"
     gene            720..2162
                     /locus_tag="VHZ56_13610"
     CDS             720..2162
                     /locus_tag="VHZ56_13610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019858323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjX family protein"
                     /protein_id="HEX4299052.1"
                     /translation="MPQSPTTIADEIGIALGNLADAAAGGLTPTLRLGVTGLSRAGKT
                     IFITALVHNLLTGGRLPGFAPLADGRFIGAQLAESPDAGIPRFAYEQHLAALTGASPH
                     WPESTRRISQLRLTLKFRSGAWWSGWAGTSTLHLDIVDYPGEWLLDLPLLSLGFAEWS
                     AQALDRARRPGAPPEAAAFLAAVAALDPAAPATDPAAEALAQSFTAYLRASRADTHAL
                     STLPPGRFLMPGDLDGTPALTFAPLPPPAGPVRGSSLHAMLERRYEAYKDIVVRPFFR
                     DHFARLDRQIVLVDVLRPLNAGPAAIADLETALTDILACFRQGDSNPLLRLVARRIDR
                     ILFAATKADHVHHTSHDRLAAILNRLVARAARRAKFAGATTASVALAAVRATREGRID
                     DLDVIIGTPEAGETLDGTRYDGETEIALFPGDLPAEPDSVFEPGAPVALKFLRFLPPR
                     RLERNAEGSPLLPHIRFDRVLDFLLGDRMR"
     gene            2159..3184
                     /locus_tag="VHZ56_13615"
     CDS             2159..3184
                     /locus_tag="VHZ56_13615"
                     /inference="COORDINATES: protein motif:HMM:TIGR01620.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01620 family protein"
                     /protein_id="HEX4299053.1"
                     /translation="MKPPVAISLPADAAGAAERRAPRAFAATAIGPLPETVDSWSDPP
                     PDPETIPLAAPRRGWLPRLLWTTAGLLVSLGLGLALDSLITGLFAANPWLGWVGLTVL
                     GLFLLALVALIVRETASLWRLRTLDHLKAAAAIAIAADSLPQARPILAELTAIYAPRP
                     DLSRALARLEADRGQFFDGGELLKFGERTLMAPLDARARALTAAAARRVALVTTISPR
                     ALVDIAYVVWESIRLGGAIARLYGARPGLFGTWRLIGAILGHLAVTGGLVLTDGVVEQ
                     LVGQGLAARLSQRLGEGVVNGLMTVRVGIAAMRVVRPLPFTTEPAPLVKDFLPELANV
                     LKSNATS"
BASE COUNT          394 a         1402 c          886 g          502 t
ORIGIN      
        1 cgcccgccaa cctcttcccc aacggcgaca ccaccatcga gcccgagaac cgctggcgca
       61 gccacggcca cctgctgttc cagaactgga tcaacgacat ctaccagacc acccccttcg
      121 accggaccag gatcggcgag gtgtagaccc gcgcccctac ttcccctccg cctccgcctc
      181 cgcctccgcc tccgcctccg cctccgccgc cgtcttcagc ccctccagca tcatcgtcca
      241 gttcttccga aactccgcct tcgccttgtc gtcaaagctc tgcggctcgc cgcgcgccag
      301 ttgcgccagc gtcacccggc tgccgctgcc gtccggcacg atccgcaccc gcacggcgtt
      361 gtagcttttg ggcggctccg gcgtcttcga ccagtgcgta aagctcagct ccttgcccgg
      421 caccgcggtc tcgatcgcgc cgtagtcggt gaacgcgttg ccgttccact cgcccttcag
      481 cgtgtatgtc gagcccggct tccagtccgt ctccatccgc gcgcccatga acatcggcga
      541 ttgtgcctgc gtcagtgccg accacacctt gcccggcgcc gcatcgatct gcgtctccac
      601 ttcgacgact ggctgctcca tcttctcctc catggttcgt gggacaaatg cccgggcgcc
      661 gcgcccggtt gcttgcaatc ggccccacgc atcctacctt ctgcccgaaa cgagcgccca
      721 tgccgcaatc gccgaccacc atcgccgacg aaatcggtat cgccctcggc aatctcgccg
      781 acgccgcggc aggcggcctg acgccgacgc tgcggctcgg cgtcaccggc ctcagccgcg
      841 ccggcaagac catcttcatc accgccctcg tccacaatct gctgaccggc ggccgcctgc
      901 ccggtttcgc gccgctcgcc gacggccgct tcatcggcgc ccagctcgcc gaatcccccg
      961 acgccggcat cccccgcttc gcctacgagc agcatctcgc ggcgctgacc ggcgcttccc
     1021 cgcactggcc ggaatcgacc cgccgcatca gccagctccg gctcaccctg aagttccgct
     1081 ccggggcctg gtggagcggc tgggccggca cctccaccct tcatctcgac atcgtcgact
     1141 atcccggcga atggctgctc gacctgccgc tgctctcgct gggcttcgcc gagtggtcgg
     1201 cgcaggctct cgaccgcgcc cgccgtcccg gtgccccgcc tgaggccgcc gctttcctcg
     1261 ccgccgtcgc cgccctcgac ccggccgccc cggcgaccga tcccgccgcc gaggcgctgg
     1321 cgcaaagctt caccgcctac ctccgcgcca gccgtgccga cacccacgcg ctgtcgaccc
     1381 tgccgcccgg ccgcttcctc atgcccggcg acctcgacgg cacccctgcg ctcaccttcg
     1441 cgccgctccc gccacccgcc ggcccggtgc gcggcagcag tctccacgcc atgctcgagc
     1501 gccgctacga ggcctacaag gacatcgtcg tgcggccgtt cttccgcgac catttcgccc
     1561 gtctcgaccg ccagatcgtc ctcgtcgacg tgctccgccc gctcaacgcc ggccccgccg
     1621 ccatcgccga cctcgagacc gcgctcaccg acatcctcgc ctgcttccgg cagggcgact
     1681 ccaatccgct gctgcggctg gtcgcccgcc gcatcgaccg catcctgttc gccgccacca
     1741 aggccgacca cgtccatcac accagccacg accggctggc ggccatcctc aaccgcctcg
     1801 tcgcccgcgc tgcccgccgc gccaaattcg ccggcgccac caccgcctcc gtcgccctcg
     1861 ccgccgtccg cgccacccgc gagggccgca tcgacgatct cgacgtcatc atcggcacgc
     1921 ccgaagccgg cgaaacactc gacggcacgc gctacgacgg cgagaccgaa atcgcgttgt
     1981 ttcccggcga cttgccggcc gagccggact ccgtctttga acccggtgcc cccgtcgcgc
     2041 tgaaattcct gcgcttcctg ccgccccgcc ggctcgagcg caacgccgag ggatcacccc
     2101 tcctgcccca catccgcttc gaccgggtgc tcgatttcct gctcggagac cgcatgcgat
     2161 gaagccgccc gtcgccattt cgctgcccgc cgacgctgcc ggcgccgccg aacgccgcgc
     2221 cccgcgcgct ttcgcggcaa ccgccatcgg cccgctgccc gaaaccgtgg actcctggtc
     2281 cgatccgccg cccgatccgg aaacgatccc gctggccgcc cccaggcgcg gctggctgcc
     2341 ccgcctgctc tggaccaccg ccggcctgct cgtctcgctc ggcctcgggc tggcgctcga
     2401 cagcctcatc accgggctgt ttgctgccaa tccgtggctc ggctgggtcg gtctcaccgt
     2461 cctcgggctg ttcctgctgg cgctggtcgc gctcatcgtc cgcgagaccg cctcgctctg
     2521 gcggctgcgc accctcgacc acctcaaggc cgcggccgcc atcgccatcg ccgccgacag
     2581 cctgccgcag gcccgcccga tcctcgccga gctcacggca atctatgccc cgcgccccga
     2641 cctgtcccgc gccctcgccc gactcgaggc cgatcgcggc cagttcttcg acggcggcga
     2701 gctgctgaaa ttcggcgagc gcacgctgat ggcgccgctc gacgcccggg cccgcgccct
     2761 caccgccgcc gctgcgcgcc gcgtagcgct ggtcaccacc atctcgccgc gcgccctcgt
     2821 cgacatcgcc tacgtcgtct gggaaagcat ccggctcggc ggcgccatcg cccgcctcta
     2881 cggcgcccgc cccggcctct tcggcacctg gcggctcatc ggcgccatcc tcggccacct
     2941 cgcggtcacc ggcggcctcg tcctcaccga tggcgtcgtc gagcagctgg tcggccaggg
     3001 cctcgccgcc cgcctgtcgc agcgcctcgg cgagggcgtc gtcaacggcc tgatgaccgt
     3061 ccgcgtcggc atcgccgcca tgcgcgtcgt ccggccgctg ccgttcacca ccgagcctgc
     3121 cccgctggtc aaggacttcc tgcccgagct cgccaacgtc ctcaagtcga acgccacctc
     3181 ctga
//
LOCUS       DATAZA010000555        10890 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_680920, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000555 DATAZA010000000
VERSION     DATAZA010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 10890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10890
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_680920"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            369..1100
                     /locus_tag="VHZ56_13620"
     CDS             369..1100
                     /locus_tag="VHZ56_13620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018267009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HEX4299054.1"
                     /translation="MASVELKAKARSGVGKGAARAVRREGLIPAVIYGDKQDPLPISI
                     SYNEAMKSIYGGGFLSHVITLDLDGKTHRVIPRDYQLDVVNDKALHVDFLRVGANTKL
                     NVQVAVHFINQDQSPGIKKGGVLNIVHHTIRLSVPADAIPEQLTVDLTGKDIGDPVHI
                     SSITLPEGATVRSHETDLTIATIAAPSALKSEEASAPAAETAAAAAPAAGAAPAAGAA
                     PAKGAAPAKGAAPAKGAAPAAPAKK"
     gene            1152..1883
                     /gene="pth"
                     /locus_tag="VHZ56_13625"
     CDS             1152..1883
                     /gene="pth"
                     /locus_tag="VHZ56_13625"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018066744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEX4299055.1"
                     /translation="MQLLVGLGNPGDKHSRNRHNIGFMAADAIAAQHGSPPFRDKFKG
                     VIAEAGIDGEKTLILKPKTFMNASGESVAAAMQFYKLAPADVVVVYDELDLAPGKVRI
                     KRGGGNGGHNGLRSIDAHIGTDYRRIRLGIGHPGHKDAVTRWVLGDFTKADHDDWLDP
                     LLAALASNIGLMLKGDDNSLMNKLALAVGGDAAERPQRPPAGPAPRAAQSHIRAARPK
                     APQAELPTKGPMAAMLAKVFGKRPD"
     gene            complement(1923..2204)
                     /locus_tag="VHZ56_13630"
     CDS             complement(1923..2204)
                     /locus_tag="VHZ56_13630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299056.1"
                     /translation="MTESKLSRRDSLRGIVALGAAGAVAAVGATALATAPAEAAQIHM
                     DVALGTLNTALRQLQDAMADKGGYRVKAIALVQQAIADVEAGIQYSRTH"
     gene            2481..3581
                     /gene="ychF"
                     /locus_tag="VHZ56_13635"
                     /pseudo
     CDS             2481..3581
                     /gene="ychF"
                     /locus_tag="VHZ56_13635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648334.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
     gene            3647..4141
                     /locus_tag="VHZ56_13640"
     CDS             3647..4141
                     /locus_tag="VHZ56_13640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018326938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX4299057.1"
                     /translation="MNPVTANRRHYEDLRIGEIVSLGTTTVTRDMIVTFAREFDPFPF
                     HLDEEAAKASLLGGLASSGWQTAALSLRMLGDSFLNTIASMGGLGFSDLKWLKPVMVG
                     DSIGGTATIAGLRRSRHHPERGIVSLDFDIRNQKGEPVMSMRLANLIELRDPSAPLLE
                     GESP"
     gene            4138..4695
                     /locus_tag="VHZ56_13645"
     CDS             4138..4695
                     /locus_tag="VHZ56_13645"
                     /inference="COORDINATES: protein motif:HMM:NF013722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HEX4299058.1"
                     /translation="MTRWYEDIAVDEVFPLGSHSFTADEIIRFGRLYDPQYFHIDPEA
                     AKFSHFGGLVASGWHTVSVGHRHMVDALSAEEARLRGLGQEPGVSGPSPGVNKMQFKS
                     PVRPDDTVSYTLLVTGKRPSNSLPGWGILYNTIDAANQRGELVYHAELVGFSKLRDYR
                     MPLRLRLLAPLTRLPVLGKLLRPQG"
     gene            4699..5088
                     /locus_tag="VHZ56_13650"
     CDS             4699..5088
                     /locus_tag="VHZ56_13650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299059.1"
                     /translation="MRALLFLALLMSASAPALAQDDDSPPSQAPAPVTVSPAEGNWGC
                     IALVDNTKAGLLTVYNGSYGYASATFGSPASGTGNAKMGSDGVEFLDGSITTVGIDKA
                     LVTFDASGNDILTVYTPDKPVLTCTPR"
     gene            5122..5955
                     /locus_tag="VHZ56_13655"
     CDS             5122..5955
                     /locus_tag="VHZ56_13655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX4299060.1"
                     /translation="MSLPVFALVLVAAVLHASWNAIVKAGSDTLLTTVLVASFGGLVG
                     LLALPFLPPVAGAAWTSIAISTVLEIVYYALIAFAYRHADMSHAYPLMRGIPPLLVAV
                     VSALFLGTALSLPEWLGIGLISAGILTMLLGTRGTLHPKGLTFALLNALVIAAYTLND
                     GIGVRLSGAPVTYGMWIFVLTGAPIAAWALARRPQIVAYARRNWLLGLVGGLGTLGSY
                     GLVLFAMSVAPVPLVAALRESSILFATLIAVLVLKEIPTRARIAAALVIAAGVIALRL
                     A"
     gene            complement(5958..6488)
                     /locus_tag="VHZ56_13660"
     CDS             complement(5958..6488)
                     /locus_tag="VHZ56_13660"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013216478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEX4299061.1"
                     /translation="MLDLKALIRTIPDYPRPGILFRDITTLIEHPQGFKESVERLASA
                     HRGMGITHVAGIEARGFIFGAGVAIEMGVGFVPIRKHGKLPGATIGQNYTLEYGVDTI
                     EIHADVLSSVHKVLLIDDLIATGGTALAAAGLLRRTGAVVENAGFVIDLFDLGGADKL
                     RALGIRIESLVQFDGH"
     gene            complement(6488..6682)
                     /locus_tag="VHZ56_13665"
     CDS             complement(6488..6682)
                     /locus_tag="VHZ56_13665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299062.1"
                     /translation="MSPIRTAATVIGVAVAVVRHPVVRAAVRAAPLLVTPRMREAAAE
                     ATLETAFRAGAIARRIVRRG"
     gene            complement(6794..7627)
                     /locus_tag="VHZ56_13670"
     CDS             complement(6794..7627)
                     /locus_tag="VHZ56_13670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007564315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HEX4299063.1"
                     /translation="MTKITTLLAVALIGLGLAGPAVAQDKSTEIVKQHWSFAGPFGTF
                     DQNQLRRGFEVFQQVCSNCHSARLLAFRNLSEPGGPEFTAAQVKALAATYTVLDPDAD
                     GGKRPGLPSDAWPGPPQSPADLKAAFGIVPPDFSVLAKARTVEEQGFNWVFNYFTTYA
                     EGGPDYIHGLLNGYQDPPPAGVKVPDGKFYNAIFPAHFIGMPPPLTDGAVKYTPAADG
                     STVPMTVDQYSRDAAAYMMWMAAPHLDDTKSAGFRVLTFLILFAILMWLVKRRIWRNA
                     H"
     gene            complement(7648..8949)
                     /locus_tag="VHZ56_13675"
     CDS             complement(7648..8949)
                     /locus_tag="VHZ56_13675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b N-terminal domain-containing
                     protein"
                     /protein_id="HEX4299064.1"
                     /translation="MSAHESKYTPTHPVAKWFEDRLPIMGFAKSTLIDYPTPKNLNYW
                     WTFGGILAFMLGVQIITGIVLAMHYTPQATMAFDSVEAIKRDVVGGNLIQAVHATGAS
                     MFFFAVYIHIFRGLYFGSYKAPREILWILGVIIYLLMMATAFFGYVLPWGQMSFWAAS
                     VITNIFAAIPVIGDPILQLLRGGFAVDNPTLNRFFSLHYLFPFIIAAVVVLHIWALHV
                     PGNNNPIGVDVKSERDTVPFHPFYTMKDFFALVVFCIPFAWLAFFAPDILGHADNYVQ
                     ANALVTPPQIVPEWYFLPFYAILRAIDFNFILDSKLLGVIFFGGSILILFFLPWLDTS
                     KVRSGTFRPAFKWFYWLFVVNFILLMWYGAQEPATQVGPFTVADVSKISVVYYFAYFL
                     VILPLLGRFEKPRPLPNSISEAVLKMPRAVSGADPAMPAAH"
     gene            complement(8964..9488)
                     /gene="petA"
                     /locus_tag="VHZ56_13680"
     CDS             complement(8964..9488)
                     /gene="petA"
                     /locus_tag="VHZ56_13680"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEX4299065.1"
                     /translation="MAQDAVPDSGKRDFLFVASAAVGIVGVAAVVWPLINQMNPDASV
                     LALSSTEIDISKIATGSTITIKWRGMPVFIRNRTQKEIDEARAVPMDQLKDPQTDQDR
                     VMKGHDNWLIMIALCTHLGCIPIGQSGDYDGWLCPCHGSQYDSSGRIRRGPAPKNLVI
                     PPYKFLTDAKIQIG"
     gene            9720..10190
                     /locus_tag="VHZ56_13685"
     CDS             9720..10190
                     /locus_tag="VHZ56_13685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HEX4299066.1"
                     /translation="MPVELALYQPEIAQNTGTLLRLGACLGVRVHLIHPAGFTVSPGT
                     LRRGALDYLEHVALEEHDSYSRFANWRRAAGRRLVLLTTHATQSAYATVFGDADLLLL
                     GRESSGVPAEVAADADLRVRIPMRPGLRSINVAVAAALVLGEALRQTRHFETLA"
     gene            10187..>10890
                     /locus_tag="VHZ56_13690"
     CDS             10187..>10890
                     /locus_tag="VHZ56_13690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase"
                     /protein_id="HEX4299067.1"
                     /translation="MTPSDIDLHKTTATAWFRQVRDDLCARLEAIEDEGGATRDAPAG
                     RFDIRPWSRPEGGGGEIGLLHGRVFEKAGVHISVVHGRFTEEFARQMPHTEAGAEFWS
                     AGVSVIVHPRNPHVPAAHLNTRMIVTGRYWFGGGGDLTPVLDRRRTQADPDSVDFHAA
                     FKAACAAHPGVDYDRYKAWCDEYFWLKHRNEPRGIGGIFYDQLHSGDWAADFAFTQDV
                     GRAFLDIYPDLVRRNFT"
BASE COUNT         1827 a         3996 c         3317 g         1750 t
ORIGIN      
        1 ccaggaccag caggacgatg agaagcggac tcatgcgcga aattcctcca cccgttcaga
       61 tttgacgatc cggagccgcc agaatcgcga ccgcccccgt ctccgtcagg ctttcatcga
      121 aaccccgtac aacgcaatcg catcccatcg gtcgcccagg cactagagtc gcccctcgcc
      181 ggcggcccag ccgggcgcgt caaataccct gacgcagagc tgacgcctcc gccggccgcg
      241 ttctagctcc ccttgcccgg cgggcgcctt tcccctatag gcagcgccca tgaagcgcct
      301 gtcacccctg gaggacgggc gcgcagtcgt ttgtgcgcaa acgctgcacc aacccaagga
      361 catgttccat ggcttccgtt gaactgaagg ccaaggcgcg cagcggggtg ggcaaggggg
      421 ccgctcgtgc tgttcgtcgt gaaggtctca tccccgccgt catctacggc gacaagcagg
      481 accccctgcc gatttccatc tcctacaacg aggcgatgaa gtcgatctat ggtggcggct
      541 ttctcagcca cgtcatcacc ctcgatctcg acggcaagac gcaccgcgtg atcccgcgcg
      601 actaccagct cgatgtcgtc aacgacaagg cgctgcacgt cgatttcctg cgggtcggcg
      661 ccaacaccaa gctcaacgtg caggtcgccg ttcacttcat caaccaggac cagagcccgg
      721 gcatcaagaa gggcggcgtg ctcaacatcg tgcaccacac gatccggctg agtgttcccg
      781 ccgacgccat ccccgagcag ctgactgtcg atctcaccgg taaggacatc ggcgatccgg
      841 tgcacatctc gtcgatcacc ctgcccgagg gcgccacggt tcgctcgcac gagaccgacc
      901 tgaccatcgc caccatcgcc gccccctccg ccctgaagtc ggaagaggcc tcagccccgg
      961 ccgccgagac cgccgccgcg gcggctcccg ctgccggcgc cgcgccggct gccggtgccg
     1021 ccccggccaa gggcgcagcc cccgccaagg gcgccgcgcc ggccaagggt gcggctcctg
     1081 ccgcgccggc caagaagtaa acctgcaccc gggatggccc acgggccatc ccgctgtctc
     1141 gggactcggc catgcagttg cttgtcggcc tcggcaatcc cggggataaa cacagccgca
     1201 accggcacaa tatcggcttc atggccgccg acgcgatcgc cgcgcagcac ggctccccgc
     1261 ccttccgcga caagttcaag ggcgtgatcg ccgaagccgg catcgacggc gaaaagaccc
     1321 tcatcctcaa gccgaagacc ttcatgaacg cgtcgggcga aagcgtcgcc gcggccatgc
     1381 agttctacaa gctcgccccg gccgacgtcg tcgtcgtcta cgacgagctc gacctcgctc
     1441 ccggcaaggt gcggatcaag cgcggcggcg gcaatggcgg ccacaatggc ctgcgctcga
     1501 tcgatgccca catcggcacc gactaccgcc gcatccgcct cggcatcggc caccccggcc
     1561 acaaggacgc ggtgacccgc tgggtgctgg gcgatttcac caaagccgac cacgacgact
     1621 ggctcgaccc gctgctcgcg gcactggcct ccaacatcgg cctgatgctg aagggcgacg
     1681 acaattcgct gatgaacaag ctggcgctgg ccgtgggtgg cgatgccgcc gagcgcccgc
     1741 agcgcccgcc ggccggtccg gcgccccgcg ccgcccagag ccacatccgt gccgcccgcc
     1801 ccaaggcgcc gcaggccgaa ttgccgacca agggcccgat ggcggcgatg ctggcaaaag
     1861 tcttcggcaa gcggcccgat taggaggccg gcaccgatct cccggcgccg gcgaaagcga
     1921 tttcagtgcg tccgcgagta ctggatgccg gcttcgacgt cggcaatcgc ctgctgcacc
     1981 agcgcgatcg ccttgacccg gtagccgccc ttgtccgcca tggcgtcctg caactgccgc
     2041 agcgccgtgt tgagcgttcc gagcgccacg tccatgtgga tctgcgccgc ttcggccggg
     2101 gccgtggcga gggcggttgc accgactgcg gcgacggcac cggcggcgcc cagcgccacg
     2161 atgccgcgca ggctgtcacg gcgcgaaagc tttgactcag tcatgggaaa ctccattgta
     2221 agggtgtggg gttgcaccgg ccgatgagcc tctcggcagg tgcgggggac gctagtccgc
     2281 gtcgcgcgcc ttgacgctgt ggccagatac cgctgctccg gggagccttt attcagcctg
     2341 cgttcagtcg tccggctata agcggcgaga cgagcttcgg cccgagtccc cggccggatt
     2401 ccccaccgat ccttgccatt gacacccgct gcgatccgaa ccatctgaag cctcgcaatc
     2461 cgcgcggaga ctttgcatcg atggccttga agatcggcat cgtcggcctg cccaacgtcg
     2521 gcaagtcgac cctcttcaat gccctcaccc gcactgccgc ggcgcaggcc gccaacttcc
     2581 ccttctgcac catcgagccc aacatcggcg aggtcgccat ccccgacgcg cgcctcggct
     2641 cgctcggccg catcgccaaa tcggcgcagc tcattccggc ccgcatgagc ttcgtcgaca
     2701 tcgccggcct ggtcaaaggc gccagcaagg gctaaggcct cggcaaccag ttcctcggca
     2761 acatccgcga atgcgatgcc gtcatctacg tgctgcgctg cttcgatgac cccaacgtca
     2821 tccacgtcgc caaccgcgtc gatccgatct ccgatgccga ggtggtcgag accgagctga
     2881 tgctcgccga tctcgaaagc ctcgaaaagc gcgccaatgg cctcgagaag aaggcgaagc
     2941 agggcgacaa ggacgccaag ctcgccttcg gtctcgtcca gcaggccctc gtgctgctgc
     3001 gcgacggcaa gtcggcgcgg ctcgttacgc gcgccgatgc cgaacaggag aaggccttcc
     3061 agggcctgca actgctgacc gccaagccgg tgctctacgt ctgcaacgtc gacgaagcct
     3121 ccgccgccac cggcaacgcc tactcgcagc aggtcgaggc ctatgcgcgt gagcatgcgg
     3181 ccgggtgcgt cgtcatctcc gccgagatcg aaagccagct cgcccagctc gcggacgacg
     3241 agcaggccga atacctttcg agcctcgagc tcggcgagcc ggccctcaac aagctcatcc
     3301 gcgccggcta cgatctgctt ggtttgcaga cctatttcac cgccggcccg aaggaagcgc
     3361 gggcctggac tatccacaag ggcgatcgcg ccccgcaggc cgccggcgtc atccattcgg
     3421 atttcgagca cggcttcatc cgcgcccaga ccatcggcta cgacgactat gtcgccctcg
     3481 gcggcgaagt cgcggcccgc gaggccggca aggcccgtga tgaaggcaag gactacgtcg
     3541 tcaaggacgg cgacgtgatg ctgttccgct tcagcagctg accctccggc gcctcgtcgg
     3601 gacggcttgc ccctccgccg caggttgacg tatacgtcaa cgcgccatga accccgtcac
     3661 cgccaatcgc cgccactacg aagatctgcg catcggcgaa atcgtcagcc tcggcacgac
     3721 gacggtgacc cgcgacatga tcgtcacctt cgcccgcgag ttcgacccct tccccttcca
     3781 tctcgatgaa gaggcggcga aggcctcgct gctcggcggg ctcgcctcct ccggctggca
     3841 gaccgccgcc ttgtcgctgc gcatgctggg cgacagcttc ctcaacacca tcgcctcgat
     3901 gggcggcctc ggcttctccg acctcaaatg gctgaagccg gtgatggtcg gcgacagcat
     3961 cggcgggacg gcgaccattg ccggcttgcg ccgctcccgc caccatccgg agcgcggcat
     4021 cgtcagcctc gatttcgaca tccgcaacca gaagggcgag ccggtgatgt cgatgcgcct
     4081 cgccaacctc atcgagcttc gcgatccgtc cgcccccctg ctcgagggcg agagcccatg
     4141 acccgctggt acgaggacat tgccgtcgac gaggtcttcc cgctcggcag ccacagcttc
     4201 accgcggacg aaatcatccg cttcggccgg ctttatgatc cgcaatattt ccacatcgat
     4261 ccggaagccg ccaaattcag ccatttcggc ggcctcgtcg cctccggctg gcacaccgtc
     4321 agcgtcggcc atcgccatat ggtcgacgcg ctgtccgccg aagaggcgcg tttgcgcggc
     4381 ctcggccagg agccgggcgt ttccggcccc tcccccggcg tcaacaagat gcagttcaag
     4441 tcgcccgtgc ggcccgacga caccgtgagc tacacgctcc tggtcaccgg caagcggccg
     4501 tcgaactcgc tgcccggctg gggcatcctc tacaacacca tcgacgccgc caaccagcgg
     4561 ggcgagctgg tctatcatgc cgagctcgtc ggcttttcca agctccgcga ctaccggatg
     4621 ccgctgcgcc tgcgcctact ggcgccgttg acccgactcc ccgttttagg gaaactgctg
     4681 cgcccccagg gataaacgat gcgcgctctg ctcttcctcg ctttgctgat gtccgccagt
     4741 gcgccggccc ttgcccagga cgacgattcg ccgccctcgc aggcgcctgc ccccgtgact
     4801 gtcagccccg ccgagggcaa ttggggctgc atcgcgcttg tcgacaacac caaggcaggc
     4861 ttgctcaccg tctacaacgg cagctacggc tacgcctccg ccactttcgg ttcgcccgcc
     4921 tcgggcaccg gcaatgccaa gatgggctcg gacggcgtcg agttcctcga cggcagcatc
     4981 accaccgtcg gcatcgacaa ggcgctggtg accttcgacg ccagcggcaa cgacatcctc
     5041 acggtctata ccccggacaa gccggtactc acctgcacgc cgcgctgaaa ccacgttcca
     5101 gctgaaccag gcgcacccgc catgtcgctt ccggtcttcg cgctcgtcct cgtggccgca
     5161 gttctgcacg ccagctggaa cgccatcgtc aaggccggca gcgacaccct gctgaccacc
     5221 gtcctcgtcg ccagtttcgg cggcctcgtc ggcctcctcg cgctgccctt cctgccgccg
     5281 gtcgccggcg ctgcgtggac cagcatcgcc atctccaccg tgctcgagat cgtctactac
     5341 gcgctcatcg ccttcgccta ccgccacgcc gacatgagcc acgcctatcc gctgatgcgc
     5401 ggcatcccgc cgctgctcgt cgccgtcgtc tccgcgctgt tcctcggcac cgcactctcg
     5461 ctccccgaat ggctgggcat cggcctcatc tcggccggca tcctcaccat gctgctcggc
     5521 acgcgcggca ccctccaccc caaaggcctc accttcgccc tcctcaacgc cctggtgatc
     5581 gccgcctata ccctcaacga cggcatcggc gtccgcctct cgggcgcgcc cgtcacctac
     5641 ggcatgtgga tcttcgttct gaccggcgcg ccgatcgccg cctgggccct ggcacgtcgc
     5701 ccgcagatcg tcgcctacgc ccgccgcaac tggctgctcg ggctcgtcgg cggcctcggc
     5761 acgctcggct cctacggcct cgtgctgttc gccatgagcg tcgcgcccgt gccgctggtt
     5821 gcggcgctgc gggaatcctc gatcctgttc gcgacgctca tcgccgtcct cgtgctcaag
     5881 gaaatcccga cccgcgcccg catcgccgcg gccctcgtca tcgccgccgg cgtcatcgcc
     5941 ctgcgcctcg cctgagttca gtgcccgtcg aactgcacca ggctctcgat ccggatgccc
     6001 agcgccctga gcttgtcggc cccgccgagg tcgaacaggt cgatgacgaa cccggcgttc
     6061 tcgaccaccg ccccggtgcg ccgcagcagt cccgccgccg ctagcgccgt gccgccggtc
     6121 gcgatcaggt cgtcgatcag cagcaccttg tgcactgagc tgagcacgtc ggcatggatc
     6181 tcgatcgtgt cgaccccata ctccagcgtg tagttctgcc cgatcgtcgc ccccggcagc
     6241 ttgccgtgct tgcggatcgg cacgaagccg acgcccatct cgatggcgac gcccgccccg
     6301 aagatgaagc cgcgcgcctc gatccccgcc acatgcgtga tgcccatgcc acgatgcgcg
     6361 ctggccagcc gctcgacgct ctccttgaac ccctgcggat gctcgatcag cgtcgtgatg
     6421 tcgcggaaca ggatgcccgg ccgcggataa tccgggatcg tgcggatcag cgccttgagg
     6481 tcgagcatca gccgcgccgc acgatcctgc gggcaatggc gccggcccgg aacgccgtct
     6541 ccagcgtcgc ttccgccgcg gcctcgcgca tccgcggcgt caccagcagc ggcgccgcgc
     6601 gcacggccgc ccggaccacc gggtggcgga ccacggcgac ggcgaccccg atcacggtag
     6661 cggcggtgcg gatgggcgac atgtgcgaac cctcgcgaag caacccgccg agactaccgc
     6721 agcccgccct ccggcgcaaa gcgacaaaaa agggcgccga agcgcccttt cgatagcctg
     6781 ccgtcgcggc ccgtcagtgc gcgttgcgcc agatccgccg cttcaccagc cacatcagga
     6841 tcgcgaacag gatcaggaag gtcagcaccc ggaaccccgc cgacttggta tcgtcgaggt
     6901 gcggcgccgc catccacatc atgtaggcgg cagcgtccct ggaatactgg tctaccgtca
     6961 tcggcacggt cgagccgtcg gccgccggcg tgtacttcac cgcgccgtcc gtcagcggcg
     7021 gcggcatgcc gatgaagtgc gccggaaaga tcgcgttgta gaacttgccg tccggcactt
     7081 tcacgcccgc cggcggcggg tcctggtagc cgttgagcag cccgtggatg tagtccggcc
     7141 cgccctcggc ataggtcgtg aagtagttga agacccagtt gaagccctgc tcctcgacgg
     7201 tccgcgcctt ggccagcacc gagaagtcgg gcggcacgat gccgaacgcc gccttgaggt
     7261 cggccgggct ctgcggcggc cccggccagg cgtccgacgg cagccccgga cgcttgccgc
     7321 catcggcatc gggatcgagc acggtgtagg tcgcggccag cgccttgacc tgcgccgcgg
     7381 tgaattccgg gccgcccggc tcgctgaggt tgcggaacgc cagcagccgc gccgaatggc
     7441 agttcgagca gacctgctgg aacacctcga agccgcgccg cagctggttc tggtcgaagg
     7501 tgccgaacgg ccccgcaaaa ctccagtgct gcttgacgat ctcggtcgac ttgtcctgcg
     7561 cgaccgccgg accggcgagg cccagcccga tcagggcaac ggcgagaagg gtcgtgatct
     7621 tggtcattcg gcgggtgtcc tggggcatca atgcgcggcc ggcatggcgg gatcggcacc
     7681 gctcaccgcg cgcggcatct tcagcacggc ctccgagatc gagttgggca gcggccgcgg
     7741 cttctcgaag cggccgagca gcggcaggat gacgaggaag taggcgaagt agtagaccac
     7801 cgagatcttg ctcacgtcgg ccaccgtgaa cggccccacc tgcgtcgccg gctcctgcgc
     7861 gccgtaccac atcagcagga tgaagttgac cacgaacagc cagtagaacc acttgaacgc
     7921 cggccggaac gtccctgacc gcaccttcga cgtgtcgagc cagggcagga agaacaggat
     7981 caggatcgag ccgccgaaga agatcacgcc gagcagcttc gaatcgagga tgaagttgaa
     8041 atcgatggcc ctgaggatcg cgtagaacgg caggaagtac cactccggca cgatctgcgg
     8101 cggcgtcacc agcgcgttcg cctgcacgta attgtcggcg tgcccgagga tgtccggtgc
     8161 gaagaaggcc agccacgcga acgggatgca gaacaccacc agcgcgaaga aatccttcat
     8221 cgtgtagaac ggatggaacg gcacggtgtc gcgctccgac ttcacgtcga cgccgatcgg
     8281 gttgttgttg cccggcacgt gcagcgccca gatgtgcagc accaccaccg ccgcgatgat
     8341 gaacgggaac aggtagtgca gcgagaagaa gcggttgagc gtcgggttgt cgaccgcgaa
     8401 gccgccgcgc agcagctgca ggatcggatc gccgatcacc gggatcgccg cgaagatgtt
     8461 ggtgatcacc gaggcggccc agaagctcat ctggccccac ggcagcacgt agccgaagaa
     8521 cgccgtcgcc atcatcagca ggtagatgat gacgccgagg atccacagga tctcgcgcgg
     8581 cgccttgtac gagccgaaat acagcccgcg gaagatgtgg atatagacgg caaagaagaa
     8641 catcgacgcg ccggtcgcat gcactgcctg gatgaggttg ccgccgacca cgtcgcgctt
     8701 gatcgcctcc accgagtcga aggccatcgt cgcctgcggc gtgtagtgca tggccagcac
     8761 gatgccggtg atgatctgca cccccagcat gaaggcgagg ataccgccga acgtccacca
     8821 atagttgagg ttcttgggcg tcggatagtc gatcagggtc gacttggcga agcccatgat
     8881 gggcagccgg tcttcgaacc acttcgcgac ggggtgagtg ggagtgtatt tgctctcgtg
     8941 cgccgacatt gaggtctttc cccttaaccg atctggatct tggcgtcggt caggaacttg
     9001 tagggcggga tcaccaggtt cttgggcgcc ggccccctgc ggatacggcc cgagctgtcg
     9061 tactgcgacc cgtggcacgg gcagagccag ccatcatagt cgcccgactg gccgatcggg
     9121 atgcagccca ggtgcgtgca cagcgcgatc atgatgagcc agttgtcgtg gcccttcatg
     9181 acgcggtcct ggtcggtctg cggatccttg agctgatcca tcggcacggc ccgcgcctcg
     9241 tcgatttcct tctgcgtgcg gttgcggatg aacaccggca tgccgcgcca cttgatggtg
     9301 atcgtcgaac cggtggcgat cttgctgatg tcgatctcgg tggacgacag cgccagcacc
     9361 gaggcgtcgg gattcatctg gttgatgagc ggccacacca cggccgcgac ccccacgatg
     9421 ccgacggccg cgctcgccac gaacaggaaa tcccgcttgc cgctgtccgg caccgcgtcc
     9481 tgtgccaaat tcgattctgt cgccaaggtc agaaacccct gcctgatgcc tgatttcgcg
     9541 ccactttgca gagcccccgc accgccgcgc gacagtgatc cacccgccct cgacagcgcg
     9601 tgatttgggt gtctttttgc actctcctcc gcgcttgtcc agcctgacag gccgcgcgaa
     9661 aacggctctg cgacactata cccactggct tccacaagcc tgtccgccaa ggaccagcca
     9721 tgcccgtcga actcgccctc taccagccgg aaatcgcgca gaacaccggt acgctgctgc
     9781 gcctcggcgc ctgcctcggc gtccgcgtgc atctcatcca tccggccggc ttcacggtct
     9841 cgccgggcac gcttcggcgc ggcgccctcg actacctcga gcatgtcgcg cttgaagagc
     9901 acgattccta ttcgcgcttt gccaactggc gccgcgccgc cggccgtcgc ctcgtgctgc
     9961 tcaccaccca cgccacccag tccgcctacg cgacggtctt cggcgacgcc gacctgctgc
    10021 tgctcggccg cgaaagcagc ggcgtgccag ccgaggtcgc tgccgacgcc gaccttcgcg
    10081 tccgcatccc gatgcgcccc ggcctgcgct cgatcaatgt cgccgtcgcc gcggcgctgg
    10141 tattgggaga agccctgcgc cagacccgcc atttcgagac ccttgcatga cgccctccga
    10201 catcgacctc cacaagacca ccgccactgc atggttcagg caggtacgcg acgatttgtg
    10261 cgcccggctc gaagccatcg aggacgaagg cggcgccacc cgcgatgcac ccgccggccg
    10321 cttcgacatc aggccatggt cgcgccccga gggcggcggt ggcgagatcg gcctgctgca
    10381 cggccgcgtc ttcgagaagg ccggcgtcca catctcggtc gtccatggcc gcttcaccga
    10441 agaattcgcc cggcagatgc cgcacaccga ggctggagcc gaattctgga gcgccggagt
    10501 gtcggtcatc gtccacccgc gcaacccgca cgtgcccgcc gcgcacctga acacccgcat
    10561 gatcgtcacc ggccgctact ggttcggcgg cggtggcgac ctgaccccgg tgctcgacag
    10621 gcggcgcacc caggccgatc cggacagcgt cgactttcat gccgccttca aggcggcctg
    10681 cgccgcccac cccggtgtcg actacgaccg ctacaaggcg tggtgcgacg agtatttctg
    10741 gctcaagcac cgcaacgagc cgcgcggcat cggcggcatc ttctacgacc agctgcactc
    10801 cggcgactgg gccgccgact tcgccttcac ccaggacgtc gggcgtgcct tcctcgacat
    10861 ctatccagac ctggtccgcc gcaatttcac
//
LOCUS       DATAZA010000556         2156 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3932146, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000556 DATAZA010000000
VERSION     DATAZA010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2156
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3932146"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..456
                     /locus_tag="VHZ56_13695"
     CDS             <1..456
                     /locus_tag="VHZ56_13695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_156384673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor-like protein"
                     /protein_id="HEX4299068.1"
                     /translation="DDTIDIQINESDLKFDTYRSSGAGGQHVNTTDSAIRITHIPSGI
                     IVACQAERSQHKNRATAMQMLKARLYEQELEKREAAANAEAASKTDNSWGHQIRSYVL
                     QPYQMVKDLRTSHETSNTGAVLDGDLDGFMEASLAARVTGYADTVKDVD"
     gene            complement(453..1640)
                     /locus_tag="VHZ56_13700"
     CDS             complement(453..1640)
                     /locus_tag="VHZ56_13700"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4299069.1"
                     /translation="MTAITAGAPAGARMGRARVAVSLAFLAFGTQLGLWFAHLPVVAA
                     RLALQPGQIGLALLSIGVIGLVMQPLAGLAIVRFGSRRTAMLLLPAFIVTIGFLINSP
                     TVPLFFVFAALVGLVGTPANIANTTLASEFEKLHGRPIMSMFHGFFSLGGLVGSLLGG
                     LLISQGWGNGQGAIVVDLVLLAVGLWATSRALDIAPQPRLPAQGPRFALPVAALLGIC
                     FLAFVCNLIEGSVGDWGALYLATVKLSGPAVAASGYAMFSVAMTILRFAGGPIVERLG
                     RRTLITGGGVIMAVGLLVVVLAPWALLSAMGFLVVAVGASNISPVLTSASANTPGVAP
                     SVGIGALATSMTLGLLAGPPIIGFVAQAWGLGVGLMLVAAMGVVVAVGAAVRRWDAVA
                     VPA"
     gene            complement(1710..>2156)
                     /locus_tag="VHZ56_13705"
     CDS             complement(1710..>2156)
                     /locus_tag="VHZ56_13705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX4299070.1"
                     /translation="ALLGALASGIGLIALGLAVPQTSIVLLEVLLLVAGFGMGFTFPV
                     TTVSAQNAVDQKHLGVATGVMTFLRSLGSALGVAVLGAIALGYGVPLGAENGMMQVPR
                     IADPGAFAVLDYTMAAMMLGAAAIYALMPHKPLRGRQDAAPAPAVE"
BASE COUNT          413 a          759 c          756 g          228 t
ORIGIN      
        1 gacgacacca tcgacatcca gatcaacgaa tccgacctga agttcgacac ctatcgctcg
       61 tcgggcgccg gcggccagca cgtcaacacc accgactcgg cgatccgcat cacccacatc
      121 ccgagcggca tcatcgtcgc ctgccaggcc gagcgcagcc agcacaagaa ccgcgccacg
      181 gcgatgcaga tgctgaaggc ccgcctctac gagcaggagc tcgaaaagcg cgaagccgcg
      241 gcgaacgccg aagcggcgtc caagaccgac aacagctggg gccaccagat ccgcagctac
      301 gtgctgcagc cctaccagat ggtcaaggac ctgcggacga gccacgagac gtcgaacacc
      361 ggcgcggtac tcgacggcga cctcgacggc ttcatggagg cttcgctggc ggcgcgggtg
      421 accggctacg ccgacaccgt caaggacgtc gactaggccg gcacggccac ggcgtcccag
      481 cggcgcaccg cggcgccgac cgcgaccacc acgcccatcg cggcgaccaa catcagcccg
      541 acgccgagcc cccacgcctg ggccacgaag ccgatgatgg gcggaccggc gagcagcccg
      601 agcgtcatcg aggtcgccag cgccccgatg ccgacgctcg gcgccacgcc cggcgtgttg
      661 gcggaggcgc tggtgaggac cggcgagatg ttcgaggcgc cgaccgcgac gacgaggaag
      721 cccatggcgc tcagcagcgc ccatggtgcc agcacgacga cgaggagccc gacggccatg
      781 atgacgccgc cgccggtaat cagcgtccgc ctgcccagcc gctcgacgat gggcccgccg
      841 gcaaagcgca ggatggtcat ggcgaccgag aacatcgcgt agccgctggc tgcgacggcg
      901 gggccggaga gcttgacggt cgcaaggtag agcgcgcccc agtcgccgac cgagccctcg
      961 atgaggttgc agacgaaggc caaaaagcag atgccgagga gcgccgccac gggcagggcg
     1021 aagcgcggtc cctgcgctgg caggcgcggc tgcggcgcga tgtcgagggc ccgggaggtc
     1081 gcccacagcc cgacggccag cagcaccaga tcgacgacga tggcaccctg gccgttgccc
     1141 cagccctggc tgatgaggag gccgccgagc agcgatccga ccagcccgcc gaggctgaag
     1201 aagccatgga acatcgacat gatcggccgc ccgtggagtt tctcgaactc gctggcgagg
     1261 gtggtgttgg cgatgttggc aggcgtgccg acgagcccga ccagcgcggc gaagacgaag
     1321 aacagcggca cggtcggcga attgatcagg aagccgatgg tgacgatgaa cgccggcagc
     1381 agcagcatcg ccgtgcgccg gctgccgaac cgcacgatgg caaggccggc caatggctgc
     1441 atcacgagcc cgatgacgcc gatgctgagc agggccagtc cgatctggcc cggttgcagg
     1501 gcgagtcggg cggcgaccac cggcaggtgg gcgaaccaca gcccgagttg cgtgccgaag
     1561 gcgaggaagg ccagcgacac ggcaacgcgc gcgcggccca tccgcgcccc ggcaggcgca
     1621 ccggcggtga ttgcggtcac gaggccccca aggcttcctg ttgcccggta gtgctagcgg
     1681 ctggtcacga caacggcaag ttcggcaggc tactccaccg cgggcgccgg cgcggcatcc
     1741 tgccggccgc gcaacggctt gtgcggcatc agcgcgtaga tggcggcagc ccccagcatc
     1801 atcgccgcca tggtgtagtc gagcaccgcg aacgcccccg gatcggcaat gcgcgggacc
     1861 tgcatcatgc cattctcggc accgagcggc acgccgtagc cgagcgcgat ggcgccaagg
     1921 accgccacgc cgagcgcgct gccgagcgag cggaggaagg tcatcacgcc cgtcgccacg
     1981 ccgaggtgct tctggtcgac cgcgttctgc gccgacacgg tggtgacggg gaaggtgaag
     2041 cccatgccga agcccgccac cagcagcagg acctcgagca gcacgatcga ggtctggggc
     2101 acggcaaggc cgagcgcgat cagcccgatg ccgctggcca gcgcgccgag cagcgc
//
LOCUS       DATAZA010000557         5332 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3122265, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000557 DATAZA010000000
VERSION     DATAZA010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5332
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3122265"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..475
                     /locus_tag="VHZ56_13710"
     CDS             <1..475
                     /locus_tag="VHZ56_13710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX4299071.1"
                     /translation="DFVVSESTGTFSIRATFPNPRRLLLPGMFVRATVDLGTEPDGFL
                     VPQRAVTFNASGQATAFFVENGKAASHVLTTTGTNGNDWVVTAGVTDGAQLIVDGLQK
                     VSDGSAVTPVPVTLNDQGVAVDAAASSAPPASGAPPAAPASSSAPAASASSAAAG"
     gene            481..3645
                     /locus_tag="VHZ56_13715"
     CDS             481..3645
                     /locus_tag="VHZ56_13715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018902533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX4299072.1"
                     /translation="MTDTAPRPSRRRSLASFFIARPIFAIVLAIVAVLAGVIGIVSLS
                     ITQYPEIAPTTVRVSASDPGASADAVENSVTTIIENAMTGLEGLLYMESSSSTGSASV
                     TLTFSNAVSGDTAEVQVQNKLSSVERRLPTSVQNAGLSVNRSTSSILMIGNIVSNDDK
                     YATDQLSDIMTNDIQPVVERIDGVGGIQAFGSGYAMRIWLDPLSLDKYQLTPSDVVTA
                     IQQQNVQVSVGSIGASPVVAGQQLRAVVTAQSQLTTVDQFKAIILKSDPTGSTVRLDD
                     VARVEIGLSSYGSSSTFNGHSAAGFGVQLASGANAITVANAVHATLDGLKNTLPQGVS
                     IAYSYETTPFVEQSIEKVVETLVEAIVLVFVVLLLFLQNLRATLIPMIAIPVVLLGTF
                     GILAALGFTINMLTMFAMVLAIGLLVDDAIVVVENVSRIMTDEGLSPREATEKSMQQI
                     TGALIGIALVLTAVFIPMAFFGGSVGVIYRQFSVTIVSAMGLSVLVAIILTPALCAML
                     LRPPKPGRRNWLGWFDRGVRRGTSAYVGAAAILIVRPLRVLAVFVVLGGAAYFIYATL
                     PSSFVPQEDQGVLTTQISLPVGANAARTEAVVKVVEGYFLNQEKANVDSVFTTVGFGY
                     GGGGENNAMAFVRLKDFSQRPSRQQSAAAIAARASAYFQRIRDAQVYALAPPAIQGLG
                     QTSGFSMYLEDTGNQGRDALNDASNKLAQLASQSSKVTNVRGNAGNTQSQLQVNIDQE
                     KAGALGVSLSDANAVLATAFGGTDVNDFDYNGQIRPVYVQGDAPYRMQPDDVERWYAR
                     NGSGEMVPFSAFTTTQWTQGAPSLARFNGAPAIAIQGDAADGVSSGDAMTEMETLVAQ
                     LSGGYSAAWSGLSYEERLSGSQATLLYAISVLVVFLSLAALYESWSIPFAVILSVPVG
                     VFGALLAAKLLGQSDDVYFKVGLLTTIGLAAKNAILMVEFATDMQAEGRTALDAILEA
                     ARLRIRPIVMTSLAFILGVLPLAVASGAGSGAQNAIGITVLGGMLSATLLGVFFVPVF
                     FVLVRRPWWRRRADPALAPPAAQP"
     gene            3802..4083
                     /locus_tag="VHZ56_13720"
     CDS             3802..4083
                     /locus_tag="VHZ56_13720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012590104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEX4299073.1"
                     /translation="MSLEGLLIILLVGLVAGWLASLIVRGGGMGIFGDLLVGLVGALI
                     GSWLVPRLHIALGSGLLAEILDATIGAVILLLILRLIFGLGGGRWRRRF"
     gene            4100..4888
                     /gene="bluB"
                     /locus_tag="VHZ56_13725"
     CDS             4100..4888
                     /gene="bluB"
                     /locus_tag="VHZ56_13725"
                     /EC_number="1.13.11.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008874728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016722 - oxidoreductase activity, acting
                     on metal ions [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0032363 - FMN catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5,6-dimethylbenzimidazole synthase"
                     /protein_id="HEX4299074.1"
                     /translation="MPALEKPYSLSDRLDGRPPLDGAACRRHIPAVRTRAQTTGRLRA
                     TLATEPDASAVPEFGPDFRREFLDLLRWRRDVRRFRTDAIAPETIERLLAIASLAPSV
                     GLSQPWRFVLVDTPGCRAGILENFERCNAEALADYGGDRAALYARLKLSGLREAPCQF
                     AVFADLSTSQGAGLGRRTMPATLEYSAVMAVHTLWLAARAEGIGLGWVSILDPEAVCR
                     LLDAPPDWKLVGYFCMGLPAEASPTPELETRGWETRRLVSILRR"
     gene            5079..>5332
                     /locus_tag="VHZ56_13730"
     CDS             5079..>5332
                     /locus_tag="VHZ56_13730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015315078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEX4299075.1"
                     /translation="MTADRSDALVVFGVTGDLAHKMILPSLYQMVRRGHITQPIIGVA
                     LDDWDVDRLADRARDGIARQFGTVDEAVFAKLKGLLHYVSG"
BASE COUNT          822 a         1905 c         1665 g          940 t
ORIGIN      
        1 cgatttcgtc gtcagcgagt cgacgggcac cttcagcatc cgcgcgacct tccccaatcc
       61 caggcgcctg ctgctgcccg gcatgttcgt ccgcgccacc gtcgacctgg gcaccgagcc
      121 tgacggcttt ctcgttccgc aacgcgccgt gaccttcaac gcctccggcc aggcgacggc
      181 gttcttcgtc gagaacggca aggccgcaag ccacgtgctg acgaccaccg gaaccaacgg
      241 caacgactgg gtggtcaccg ccggagtgac cgatggcgcg cagctgatcg tcgatggcct
      301 gcagaaagtc agcgatggct ccgccgtgac cccggtgccg gtgaccctca acgaccaggg
      361 cgtcgcggtc gatgccgccg caagttcggc acctcccgcc agcggcgcgc ccccggccgc
      421 tcccgcgagc agcagcgcac ctgccgcgtc agcctccagc gccgcggcgg gctgaccccg
      481 atgaccgata ccgcgccccg cccgtcgcgc cgccgctcgc tcgccagctt cttcatcgcc
      541 cggccgatct tcgcgatcgt gctggcgatt gtcgccgtgc tggcgggcgt catcggcatc
      601 gtctcgctgt cgatcaccca gtaccccgag atcgcgccaa ccacggtgcg ggtcagcgcc
      661 agcgatcccg gcgccagcgc cgacgcggtc gagaactcgg tgacgacgat catcgagaac
      721 gccatgaccg ggctcgaggg cctgctctat atggaatcga gttcttcgac cggttcggcc
      781 agcgtcacgc tgaccttttc caacgccgtc agcggcgaca ccgccgaggt gcaggtccag
      841 aacaagctgt ccagcgtcga acgccgcctg cccaccagcg tgcagaatgc cggcctcagc
      901 gtcaaccgct cgacctccag catcctgatg atcggcaaca tcgtctcgaa cgacgacaaa
      961 tacgcgaccg accagctctc cgacatcatg accaacgaca tccagccggt ggtcgagcgc
     1021 atcgacgggg tgggcggcat ccaggccttc ggctcgggct atgccatgcg catctggctc
     1081 gatccgctgt cgctggacaa gtaccagctg acgcccagcg acgtggtgac ggcgatccag
     1141 cagcagaacg tccaggtctc ggtcggctcg atcggcgcct cgccggtcgt tgccggccag
     1201 cagctgcgcg ccgtggtcac cgcgcagagc cagctcacca ccgtcgacca gttcaaggcc
     1261 atcatcctca agtccgaccc gactggctcc acggtgcgtc tcgatgacgt ggcgcgcgtc
     1321 gagatcggcc tcagctccta cggctcgagc tcgaccttca acggccattc ggcggccggc
     1381 ttcggcgtgc agctggcgag cggcgccaac gccatcaccg tcgccaacgc cgtgcatgcg
     1441 acgctggacg gcctcaagaa caccctgccg cagggcgtca gtatcgccta ttcgtacgaa
     1501 accacgccgt tcgtcgagca gtcgatcgag aaggtggtgg agaccctggt cgaagccatc
     1561 gtcctggtct tcgtcgtgct gctgctgttc ctgcagaacc tgcgcgccac gctgatcccg
     1621 atgatcgcca tcccggtggt gctgctgggc accttcggca tcctcgccgc actgggcttc
     1681 accatcaaca tgctgaccat gttcgcgatg gtgctggcga tcgggctgct cgtcgacgat
     1741 gccatcgtcg tcgtcgagaa cgtctcgcgg atcatgaccg acgaaggcct gtcgccgcgg
     1801 gaggcgaccg agaagtcgat gcagcagatc accggcgcgc tgatcggcat cgccctggtg
     1861 ctgaccgcgg tgttcattcc gatggccttc ttcggcggct cggtcggcgt catctaccgg
     1921 cagttttcgg tgaccatcgt ctcggccatg ggcctgtcgg tgctggtcgc catcatcctc
     1981 acgccggcgc tctgcgccat gctgctgcgg ccgccaaagc cgggccggcg caactggctc
     2041 ggctggttcg accgtggcgt caggcgcgga acgtcggcct atgtcggcgc cgcggcgatc
     2101 ctcatcgtgc ggccgctgcg cgtgctcgcc gtcttcgtcg tgctcggcgg cgccgcctat
     2161 ttcatctacg ccacgctccc cagctctttc gtgccgcagg aagaccaggg cgtcctgacc
     2221 acgcagatct ccctgccggt gggcgccaat gccgcccgca ccgaggcggt cgtcaaggtg
     2281 gtcgagggct acttcctcaa tcaggagaag gcgaacgtcg acagcgtctt caccaccgtc
     2341 ggcttcggct atggcggcgg cggcgagaac aacgccatgg ccttcgtgcg gctcaaggat
     2401 ttctcgcagc ggccatcgcg gcagcaatcg gccgccgcca ttgccgcccg cgcctccgcc
     2461 tatttccagc gcattcgcga cgcccaggtc tatgccttgg cgcctcccgc catccagggg
     2521 ctcgggcaga ccagcggctt ctcgatgtat ctggaagaca ccggcaacca gggccgcgac
     2581 gccctgaacg atgccagcaa caagctggcg caactggcca gccagagcag caaggtcacc
     2641 aacgtccgcg gcaatgccgg caacacgcag agccagctgc aggtcaacat cgaccaggag
     2701 aaagccggcg ccctcggcgt cagcctcagt gatgccaacg cggtgctggc cacggcgttt
     2761 ggcggcaccg acgtcaacga tttcgactac aacggccaga tccggccggt ctacgttcag
     2821 ggcgatgccc cctaccgcat gcagccggac gacgtcgagc gctggtacgc gcgcaacggt
     2881 tcgggcgaga tggtgccgtt ctccgccttc accaccacgc aatggaccca gggcgcgccg
     2941 tcgctggccc gcttcaatgg tgcgccggcc attgccatcc agggcgatgc cgccgacggg
     3001 gtcagctcgg gtgacgcgat gaccgaaatg gagaccctcg tcgcgcagct gtcgggcggc
     3061 tactccgctg catggtccgg cctgtcctac gaagagcggc tgtccggatc gcaggcgacg
     3121 ctgctgtatg cgatctccgt cctcgtcgtc ttcctctccc ttgccgccct ctacgaaagc
     3181 tggtcgatcc ccttcgccgt catcctctcg gtgccggtcg gcgtcttcgg cgccctgctt
     3241 gccgccaagc tgctcggaca gtcggacgac gtgtatttca aggtcgggct gctgaccacg
     3301 atcggcctcg ccgccaagaa cgctattctg atggtggagt tcgccaccga catgcaggcc
     3361 gagggcagga cggcgcttga cgccattctc gaagccgcac ggctccgcat ccgccccatc
     3421 gtcatgacct cgctggcctt catcctcggg gtgctgccgc tcgccgtcgc ctccggcgcc
     3481 gggtcgggcg cgcagaacgc catcggcatc accgtgctgg gcggcatgct ttcggcaacc
     3541 ttgctcggcg tcttctttgt cccggtgttc ttcgtcctcg tccggcgtcc ctggtggcgg
     3601 cggcgagccg atccggcgct tgcccctcct gccgcgcagc cgtgaagcgg aaccatcccc
     3661 ggtgcatccg acttgttaga ggcaaccggg agcacctcca tgacttcgcg cctgctggac
     3721 agcatgttca tcgtcgccat cgcgctgagc gtcatcggca tcctggtgag catcgcccaa
     3781 tccttgggct aggaacgcgt catgagcctc gaaggcctcc tcatcatcct gctcgtcggc
     3841 ctcgtggccg gatggctcgc cagcctcatc gtccgcggcg gtggtatggg cattttcggc
     3901 gacctgctcg tcgggctggt cggggcgctg atcggcagtt ggctggtgcc acgactgcac
     3961 atcgcacttg gatccggact gcttgccgaa atcctcgatg cgaccatcgg ggccgtcatc
     4021 ctgctcctca tccttcgcct gatcttcggg cttggcggcg gtcgctggcg tcgccgcttc
     4081 tgaccatcac cctcgatcca tgccggcact ggaaaagccc tacagcctga gcgaccgact
     4141 cgacggccga ccgccgctgg acggcgcggc ttgtcgccga cacatccccg ctgtacgaac
     4201 gcgagcgcag acgacaggtc gattgagagc caccttggcg acggaaccag acgcatccgc
     4261 ggtcccggaa ttcggaccgg atttccggcg ggagtttctc gacctgctgc gctggcgacg
     4321 ggatgtgcgc cgcttccgca ccgacgcaat cgcgcctgaa acgatcgaac ggttgctggc
     4381 catcgccagc cttgctccct cggtgggatt gagccagcca tggcgcttcg tcctcgtcga
     4441 cacccccggc tgccgggccg gcatcctcga gaacttcgaa cgctgcaacg ccgaggcgct
     4501 ggccgactat ggaggcgacc gcgcggcgct ctatgcgcgc ctgaaactgt ccgggctgcg
     4561 ggaggcgccg tgccagttcg ccgtgttcgc cgatctttcg accagccagg gagccgggct
     4621 cggccgccgc accatgccgg caacgctcga atattcggcg gtcatggcgg tgcatacgct
     4681 ctggctcgcc gcccgcgccg agggaatcgg cctcggctgg gtctcgatcc tcgaccccga
     4741 ggccgtttgt cggctcctcg acgcgccgcc tgactggaag cttgtcgggt atttctgcat
     4801 gggcctgccg gccgaagcga gcccgacgcc cgaactcgag acccggggct gggaaacgcg
     4861 ccggctggtt tccatcctcc gccggtaggc accgattatc gagaggaggc tgtcgcagca
     4921 ccaccggtgt tctggatcga ctcctcgaca gcattcggca tcggattcca ttgccggtga
     4981 ccccggtcgg acagcgccac cttgattgac tttccgcgat gcccacccat caatgtgccg
     5041 gctggcggat ggatggatca gcgcgaggga aggacatgat gacggccgac cgatccgatg
     5101 cgctggtggt ctttggcgtc accggcgacc tcgcccacaa gatgatcctg ccgtcgctct
     5161 accagatggt gcggcgcggc catatcaccc agcccatcat cggcgtggcc ctcgacgact
     5221 gggacgtcga tcggctggcc gatcgcgctc gcgacggcat cgccaggcag ttcggcactg
     5281 ttgacgaggc ggtctttgcc aaactcaagg ggctgcttca ctacgtcagc gg
//
LOCUS       DATAZA010000558        18555 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3932956, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000558 DATAZA010000000
VERSION     DATAZA010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 18555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18555
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3932956"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..377)
                     /locus_tag="VHZ56_13735"
     CDS             complement(<1..377)
                     /locus_tag="VHZ56_13735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX4299076.1"
                     /translation="MTVTIHFHGASGTVTGSCYRVVHPKGQFLVDCGMFQGNKSVRDL
                     NYKPLPFDAKTIDFLLLTHAHIDHAGLLPKLSKFGYRKPIWCTAPTAGLLEYLIPDAA
                     GIQESEAEFESRKRGRKGDAPLEA"
     gene            complement(404..955)
                     /locus_tag="VHZ56_13740"
     CDS             complement(404..955)
                     /locus_tag="VHZ56_13740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ActR/PrrA/RegA family redox response regulator
                     transcription factor"
                     /protein_id="HEX4299077.1"
                     /translation="MSTVEELLAGDRTLLLVDDDKAFLTRLERAMEKRGFAVRIADSV
                     ASGLGAVDAAPPAYAVVDLRLEDGNGLEVVEALHKRRPDARAVVLTGYGNIATAVTAV
                     KLGAVDYLSKPADADDVINALLATGAAPPAPPENPMSADRVRWEHIQRVYELCDRNVS
                     ETARRLNMHRRTLQRILAKRAPK"
     gene            complement(998..2293)
                     /locus_tag="VHZ56_13745"
     CDS             complement(998..2293)
                     /locus_tag="VHZ56_13745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020181144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ActS/PrrB/RegB family redox-sensitive histidine
                     kinase"
                     /protein_id="HEX4299078.1"
                     /translation="MSTEIRPRRPGSWRPLRLATLVGLRWLAVIGQTVGVLFVAWGLG
                     YPLPLVECLALIALSVVVNLALILRFGAGGRPTSTVSTIQLAYDLAQLGGLLSLTGGL
                     QNPFSLLLLAPVSVSATTLPQRSTLILAGLAIIIASAISIFHRDLPWDPHASITFDRI
                     YIIGIWVSLVCGVVFVAAYTNRVAHEARQLADALTATELALSRHEQLSALDGLAAAAA
                     HELGTPLSTIALAAKEMKADIPPGPLADDVELIIAQSARCRAILAKLRSLRSGDRGDP
                     FAAVPLSELLEEVARPLEGTGKSIFIESPEGGGEPVFKRNVGLLYGLGNLIENATQFA
                     RDRVEVEASWDRNSVGVTITDDGPGFPDDLVARLGEPYLTTRARNAAADGDGPGGLGL
                     GIFIAKTLLERTGARLSFENAPAGGARVRIDWPRRQVEA"
     gene            2448..2876
                     /locus_tag="VHZ56_13750"
     CDS             2448..2876
                     /locus_tag="VHZ56_13750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007009049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2852 domain-containing protein"
                     /protein_id="HEX4299079.1"
                     /translation="MSTAIIKPQWGPLTIALMVLGFVIFWPLGLAMLAYILWGEMFGG
                     SSEKAEAFVGRSKAWCKGNGNRHQYRGWGPSSGNAAFDEYRAEQLRRLEEERQRLDEE
                     IQQFHEYMRTLRMARDREEFDRFMRERNGNRPNYGGGQNV"
     gene            3034..3771
                     /locus_tag="VHZ56_13755"
     CDS             3034..3771
                     /locus_tag="VHZ56_13755"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HEX4299080.1"
                     /translation="MIPLLQKRWPPAAEVRIDGETVAVEVKVSSRARSYRLSLPHGGQ
                     PLLTVPKFGRWGEAKAFLDRHTPWLATRLERSVKPVAFVRGAIVPLRGVKHRIVPTGR
                     VRGMVEIGEHEGEYALLVPGAPEHRSRRLIDWLKLEAQKDLERRCRIHAATLDVTVKS
                     IVMRSQATRWGSCSTTGKLNFNWRLILAPPFVLDYVAAHEVAHLVEMNHSPDFWKTVE
                     IALPTMARGRDWLKAHGRELMVYGIDG"
     gene            complement(3786..6020)
                     /locus_tag="VHZ56_13760"
     CDS             complement(3786..6020)
                     /locus_tag="VHZ56_13760"
                     /inference="COORDINATES: protein motif:HMM:TIGR02074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HEX4299081.1"
                     /translation="MRKKKAGARFMDFEISPEDRIGGGATGRGRGKAKPAKAKSRKAA
                     RNERVEPGFGGGFFTRDQHDEPPPRRGRAPKGRKQPRQKKERRRLTVGRVFATLAYWL
                     FMIGLWGAVAVGAVVAYFYLQMPAQSTWAVPERPANIRIVAADGQLISNRGKMGGEAI
                     ALKDLPEYVPAAFIAIEDKRFYQHFGIDPIGIIRAAASNLTKGHIAAGGSTLTQQLAK
                     NLFLTRDQTLGRKVQEALLALWLEHNYTKDEILELYLNRVDFGHQMVGIEAASQFYFG
                     HSARNLSLGEAAILAGSVKAPSNLNPKGDSTLVNARQHVVLQAMSDEGYISEAEAKAA
                     AIDPNETIRTKVAGSESYVADWVDTLVQAYVGDVKQDIVVYTTINWDLQKQAEFLVKE
                     AVATEGPKYHFSQGALVAVDTDGAVRAVVGGADYQQSQYNRAVTARRQPGSTFKPFVY
                     MAAMEKGYTPDTIADDDAININGWSPNDADNKFMGKMTLRDALAYSRNTVAAQLAWNV
                     GPDKVVEVAQRMGISSPLQAVPSIALGTQEVSLLELTAAYAPFANGGNGVIANVVTRI
                     ETADGKVLYDAVPAGPGQVIAPAVVGEMNDMLSTALDIGTGKHAKLAGWQIGGKTGTS
                     QKARDALFVGFTARMVCGVWLGNDDDTGTNLAGGTVPTQIWSDFMAKAHEGMTPQNLP
                     DATSAAVPASALVPNDPISALAAGGSLPSDASADASQQPAAPAKRSPKTIGDLLTGLF
                     GGGG"
     gene            complement(6181..8649)
                     /gene="gyrB"
                     /locus_tag="VHZ56_13765"
     CDS             complement(6181..8649)
                     /gene="gyrB"
                     /locus_tag="VHZ56_13765"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020010699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009330 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) complex [Evidence
                     IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HEX4299082.1"
                     /translation="MSTPAANPPASSDPDAYGADSIKVLKGLDAVRKRPGMYIGDTDD
                     GSGLHHMVYEVVDNAIDEALAGHADLVTVTLNPDGSCTVIDNGRGIPTDMHPTEGIST
                     PEVVMTQLHAGGKFDQNSYKVSGGLHGVGVSVVNALSVWLKLKIRRNGKVFEIDFANG
                     DATADLRQTGTYEPSKTAGTYEGRSGTEITFLPAATTFTMVEFDFKTLEHRLRELAFL
                     NSGVRIVLRDLRHPEPVTVELHYEGGLIEFVRYLDSAKTPLIGAPIYLIQEKDGITVE
                     VAMWWNDSYHENVLAFTNNIPQRDGGTHLAGFRGALTRQVATYAEASGILKREKVTLS
                     GEDSREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPVVENVVNEKLAEWFDEHPQEAR
                     LVVGKVAEAAAAREAARKARELTRRKSALDVNFLAGKLKDCSEKDPAKSELFLVEGDS
                     AGGSASQGRDRYTQAVLPLRGKILNVERARFDRMLGSEQIGNLVMALGTSIGREEFNI
                     EKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMRELIDRGHIYIAQPPLYKVKRGSSE
                     QYLKNERALEDYLVEGGVADASFRSAAGSVHAGADLLEIVREARDIVHQIEGFNTRYS
                     RAILEQAAIVGALDPEAVADPARAAEIGRRIATRLDLIADEVERGWQGEPDGQGGLVF
                     SRVVRGVTERHEFDANLLASADARKMRQMIERIGTIFTGSATLVRKDATTEIFGPSSL
                     FATVSAAGRKGVTLQRYKGLGEMNPEQLWETTLDPGIRTLLKVEIKDSDDHDRLFSEL
                     MGDLVEPRRDFIQDNALSVANLDV"
     gene            complement(8776..9120)
                     /locus_tag="VHZ56_13770"
     CDS             complement(8776..9120)
                     /locus_tag="VHZ56_13770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299083.1"
                     /translation="MPSATYGLFLAAMRGRRQVACVYQGHRRELCPILLGRTGLEEKS
                     LVFQFGGDTSDGPIPPSGDWKCLRLADVRDVVLRDGPWHAGASHSAAQSCMKMVEYDV
                     NPDSPYHPAFRL"
     gene            complement(9113..10225)
                     /gene="recF"
                     /locus_tag="VHZ56_13775"
     CDS             complement(9113..10225)
                     /gene="recF"
                     /locus_tag="VHZ56_13775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014330543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HEX4299084.1"
                     /translation="MPTRYLSRLRLSAFRNYQSAALDLDGRHLVLTGPNGAGKTNLLE
                     AISLLSPGRGLRRAPFDSLGNLASDQPWAVATTIETPDGPVDLGTGAAEDGGRRVRIN
                     GANARTVEQLSDYLRLLWLTPAMDGLFTGPATDRRRFLDRLVTTLVPSHSAAVADYDR
                     ATRQRNRLLEENADPLWLDALEAEMATHAAALHFARADAIGHLEARIAESLDDTAFPA
                     AALALTPLFDDRHEPVSSAALEAELVALWAGSRGLDRAAGRTVHGPHRVDLEVSYAQK
                     QLPAALGSTGEQKALLVGLILAHARLVKARTGITPILLLDEIAAHLDPDRRAALFAAL
                     DALDTQCLMTGTDAMLFAALAGRARRVTVREGRLDA"
     gene            complement(10266..11384)
                     /gene="dnaN"
                     /locus_tag="VHZ56_13780"
     CDS             complement(10266..11384)
                     /gene="dnaN"
                     /locus_tag="VHZ56_13780"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010970806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEX4299085.1"
                     /translation="MKVTLERNALLKSLGHVHRVVERRNTYPILANVLLKAADGKLDL
                     RATDLDIEVTESVPAMVATAGTTTVPAHTLYEIVRKLSDGAEVRLETDGAEQLLLTSG
                     RSRFHLACLSPDSFPDLKSGTFSHSFSLPAATLRDLIERTQFAISNEETRYYLNGIYI
                     HTLEVNKKQVLRAVATDGHRMARSETDAPDGARGMPGIIIPKKTVGEVQKLLEGVEGD
                     IGVELSDTKIRFTLEGLVLLSKLIEGTFPDYDRVTPKNNDKQLNVDRASFATAVDRVS
                     TIASDRGGKAVKLSVKDGNLELSVTNPDHGTATEEVAVEFEPESFEIGFNARYLLDII
                     GQIRSDNAVFVFKDSGSPTLVREDGDASALYVLMPMRV"
     gene            complement(11525..11722)
                     /locus_tag="VHZ56_13785"
     CDS             complement(11525..11722)
                     /locus_tag="VHZ56_13785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299086.1"
                     /translation="MPRLVVRVRKAVRRFNWLDGEVEDVSGAENEARWQAMLSGIAER
                     DREAERRLARAERALNRLSLS"
     gene            complement(11788..13215)
                     /gene="dnaA"
                     /locus_tag="VHZ56_13790"
     CDS             complement(11788..13215)
                     /gene="dnaA"
                     /locus_tag="VHZ56_13790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012634292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEX4299087.1"
                     /translation="MSGSGSEGRTERELFQRVRARLRAGFGEDVFNSWFARLELEEVV
                     EDKAHLSVPTRFLCSWIQSNYAEKILETFRSEDPAIARLHFTVRINGQARPRLSPPVE
                     QPSEPEAAPIPAAKPLRELAPPRGDALSGSALDPKMTFDSFVAGPSNEIALGIAKQVA
                     SAALNGTVSFNPVYIHSTVGLGKSHLLNAIAWAAGAAEPGRNIVYLTADHFMYHFITA
                     VQRQSAITLKDWLRRVDLLLIDDMQFLQGKSATEFGHTLGTLLTGAKQVVVAGDAPPR
                     DLEMLDERVRSRLSGGLVVPITGFDLDLRRLIVTRRAETAQARFGVHFPPAVIDYISH
                     IVISHGRDLDGAVNRLVAANQLTQEPISVTLAERTLADLVRAREARRVRIEDILRIVS
                     RHYKVPRNELLSSRRSRDVVRPRQIAMYLAKSLTSRSLPEIGRRFGGRDHTTVLHSVR
                     KVEQMMKDDADLTQEIELLKRMLEE"
     gene            complement(14024..14290)
                     /gene="rpsT"
                     /locus_tag="VHZ56_13795"
     CDS             complement(14024..14290)
                     /gene="rpsT"
                     /locus_tag="VHZ56_13795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002965247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEX4299088.1"
                     /translation="MANSPSAKKSARKIVARAEVNKSRRSRMRTFIRKVEEAIAGGKH
                     DEAMAALKAAEPEIARSASKGIVHANVAARKVSRLNHRVKALKA"
     gene            complement(14613..15497)
                     /gene="mutM"
                     /locus_tag="VHZ56_13800"
     CDS             complement(14613..15497)
                     /gene="mutM"
                     /locus_tag="VHZ56_13800"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012559728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HEX4299089.1"
                     /translation="MPELPEVETVRRGLAPYLEGARIDKVTLNRKDLRFPFPRGFARG
                     LEGQTITSVGRRAKYLLFRLSGGKTWLGHLGMTGAFRFAGFKYKEPSRYYEPAEDGKH
                     DHVVIELTHPRHGRERLIYSDPRRFGFMDLFAREEDSPYLEGLGPEPLGNAFSAAEMA
                     VRFAGKAAPVKAALLDQRVVAGLGNIYVSEALNRAHIRPTVPAKKLVLKSGKPSARLD
                     LLATGVRTVLTEAIEAGGSTLRDFRAADGGPGYFQHRFAVYDREGQPCPTPGCTGTIK
                     RIVQSGRSTFYCPVCQKP"
     gene            15581..16336
                     /gene="ubiE"
                     /locus_tag="VHZ56_13805"
     CDS             15581..16336
                     /gene="ubiE"
                     /locus_tag="VHZ56_13805"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013499930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HEX4299090.1"
                     /translation="MTETTHFGERTVPLQDKQGLVDDVFHAVADRYDLMNDLMSGGVH
                     RLWKDALVARLAPPRTGTLPYRVLDMAGGTGDIAERILNASVGYAELTVADINADMLR
                     VGAARAQKWRFGAQATFVEANAEALPFEDESFDAYTIAFGIRNVPRIEVALGEAFRVL
                     KRGGRFLCLEFSAVDVPGLDRLYKEWSDRAIPPIGRVVTGDAQPYQYLIESIRKFPPP
                     ARFSAMLEKAGFRRVTHTAMTGNVAALHAAWKL"
     gene            16340..17878
                     /gene="ubiB"
                     /locus_tag="VHZ56_13810"
     CDS             16340..17878
                     /gene="ubiB"
                     /locus_tag="VHZ56_13810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016709 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen, NAD(P)H as one donor, and incorporation
                     of one atom of oxygen [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-polyprenylphenol 6-hydroxylase"
                     /protein_id="HEX4299091.1"
                     /translation="MTLGATFRLLRAGFILAREGAFSIVDIAALPPVLRAGVRFGRLF
                     ERGAVRRNGPADRFRAALDRLGPTYVKLGQTFATRPDIVGTAVAENLAQLQDKMAPFD
                     PALVPVLLRQALHEKADALTEISPPIAAASIAQVHKAVLVEDGVRRTVAVKILRPGIK
                     ERFRADLDSYYAGAAMAERWAPSLRRLRPTDVVRTLDRSARLELDLRLEAAAISEMAE
                     NIKDDEGFVIPTVSWDQTAETVLTTSWMDGIPIRETVALDAAGLDRKELSRSLLQSFL
                     RHAIRDGFFHADMHPGNLFADPRSGAIVAVDFGIMGRISRQERRFLADILYGFITRDY
                     RMIAERHFEIGYVPRHQSVDDFALALRSIGEPLQGRTASDISMAKVLGQLFATTELFD
                     MQARPELVLLQKSMVLVEGVSRALDPDLNIWTVAEPVVGDFVRREAGPLGRLEELRDH
                     AGVAIDTIGKLPGLVRRAEAALDDYDAEKRSPARRRAARMMVAGFWVLVVIALALLFA
                     LLFR"
     gene            17950..18408
                     /gene="dut"
                     /locus_tag="VHZ56_13815"
     CDS             17950..18408
                     /gene="dut"
                     /locus_tag="VHZ56_13815"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEX4299092.1"
                     /translation="MPGDIEIALRWLDHGRGLALPQRQSPGAAGLDLCAALGVDETLV
                     LAPGQRASVPCGFAMALPPGHEAQVRPRSGLAARHGVTVLNAPGTIDADYRGEVKVIL
                     INHGQEDFVLRRGDRIAQLVVAPVSNAVFAERQGLDDTSRGSGGFGSTGR"
     gene            18418..>18555
                     /locus_tag="VHZ56_13820"
     CDS             18418..>18555
                     /locus_tag="VHZ56_13820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HEX4299093.1"
                     /translation="MPLTPEETRRYARHLVLRDIGGAGQQALQAARVLVVGAGGLGSP
                     AI"
BASE COUNT         2862 a         5895 c         6752 g         3046 t
ORIGIN      
        1 gcctcgagcg gggcatcgcc cttgcggccg cgcttgcggc tttcgaactc cgcctcgctc
       61 tcctggatgc cggcggcgtc ggggatcaga tattcgagca ggccggcggt cggggcggtg
      121 caccagatcg gcttgcggta gccgaacttg ctgagcttgg gcagcagccc ggcgtggtcg
      181 atatgggcgt gggtgaggag caggaagtcg atggttttcg catcgaaggg cagcggcttg
      241 tagttgaggt cgcggaccga tttgttgccc tggaacatgc cgcaatcgac gaggaactgg
      301 cccttcggat gcacgacccg atagcaggag ccggtcacgg tgccgctcgc gccatggaaa
      361 tggatggtga cggtcatctc aacctcgggg gacgccgcag cgtctatttg ggggcgcgct
      421 tggcgaggat ccgctgcagg gtgcggcggt gcatgttgag ccggcgggcg gtctcggaga
      481 cgttgcggtc gcacagctcg tagacgcgct ggatgtgctc ccagcggacg cggtcggccg
      541 acatcgggtt ctcgggcggc gccggcgggg cggcgccggt ggcgagcagc gcgttgatga
      601 cgtcgtcggc gtcggcgggc ttgctcaggt agtcgacggc gccgagcttc accgcggtca
      661 ccgcggtggc gatattgccg tagccggtca gcaccacggc gcgggcgtcg gggcggcgct
      721 tgtgcagggc ttccacgacc tcgaggccgt tgccgtcctc gaggcgcaaa tcgaccacgg
      781 cgtaggccgg gggcgccgca tcgacggcac ctaggccgga cgcgacgctg tcggcgatgc
      841 ggaccgcaaa gccgcgtttt tccatcgccc gctcgagccg ggtcaggaag gccttgtcgt
      901 catcgacaag cagcagggtg cggtcgcccg ccagaagttc ttcgactgtg ctcattttct
      961 gaccatttag gcgctccggg cgcaaaggtc aaagaactca ggcttctacc tggcggcggg
     1021 gccagtcgat gcgaacccgg gcgccgccgg ccggggcatt ctcgaagctc agccgcgcgc
     1081 cggtgcgctc gagcagggtc ttggcgatga agatgccgag cccgaggccg cccgggccgt
     1141 cgccgtcggc ggcggcgttg cgggcccggg tggtgaggta gggctcgccc agccgggcga
     1201 cgaggtcgtc gggaaacccc ggcccgtcgt cggtgatggt gacgccgacg ctgttgcggt
     1261 cccagctggc ctcgacctcg acgcggtcgc gggcgaactg ggtggcattc tcgatcaggt
     1321 tgccgagccc gtagagcagc ccgacattgc gcttgaatac cggctcgccg ccgccctcgg
     1381 ggctctcgat gaagatcgat ttgccggtgc cctcgagggg gcgggccact tcctcgagga
     1441 gctcgctgag cggcacggcg gcaaacggat cgccgcggtc gccgctgcgc aggctcctga
     1501 gcttggcaag gatcgcccgg cagcgggcgg actgggcgat gatcagctcg acgtcgtcgg
     1561 cgagcgggcc gggcgggatg tcggccttca tctccttggc ggccagcgcg atggtcgaga
     1621 gtggcgtgcc gagttcgtgc gcggcggcgg cggcgaggcc atcgagcgcg ctcagctgct
     1681 cgtggcgcga gagcgccagc tcggtcgccg tgagcgcgtc ggccagctgc cgggcctcgt
     1741 gggcgacgcg gttggtgtag gcggcgacga agacgacgcc gcagacgagg ctgacccaga
     1801 tgccgatgat gtagatgcgg tcgaaggtga tgctggcatg cggatcccac ggcaggtcgc
     1861 ggtggaagat cgagatggcg gaggcaatga tgatcgccag gccggcaagg atcagcgtcg
     1921 agcgttgcgg cagggtcgtg gcggaaaccg acaccggggc gaggagcagc agggaaaacg
     1981 ggttctgcag cccgccggtc agcgacagca ggccgccgag ttgcgccagg tcgtaggcga
     2041 gctggatggt cgagacggtc gacgtcgggc ggccaccggc gccaaagcgc aggatcagcg
     2101 ccagattgac caccaccgac agcgcaatga gggcgaggca ctcgaccagc ggcagcggat
     2161 agccgaggcc ccaggcgacg aacagcacgc cgaccgtctg gccgatcacc gccagccagc
     2221 gcagcccgac cagcgtcgcc agccgcagcg gacgccagct gccgggacgc cgcggccgga
     2281 tttcggtgct cacgctcatg gtctttgcag catgatcacg ctggatccgg gcggttcatg
     2341 ggaatcgttt tcggcgcttt caagaggaga aatcggacac gcatttgctt gatccggcga
     2401 acgagggggc cacatcccat tcgttcgtga ctgggagtac caagacaatg agcaccgcga
     2461 ttatcaaacc gcaatggggc cccctgacca tcgccctgat ggtcctgggg ttcgtgatct
     2521 tctggccgct cgggctggcc atgctcgcct acatcctgtg gggcgagatg ttcggcggct
     2581 cgtcggaaaa ggccgaagcc ttcgtcggca ggtcgaaagc ctggtgcaag ggcaacggca
     2641 accggcacca gtaccggggc tggggcccgt cgagcggcaa tgccgcgttc gacgagtacc
     2701 gcgccgagca gctgcgccgg ctcgaagagg aacgccagcg gctggacgag gaaatccagc
     2761 agttccacga gtacatgcgg accctccgca tggcccggga ccgcgaggag ttcgaccgct
     2821 tcatgcgtga acgaaatggc aaccgtccca attatggcgg cggccagaac gtctgacagc
     2881 cgaggaaaag ggggtccgct gcccatgcgg atccccgcaa atctcccctg acggcaggct
     2941 ttcgggcttg caactggcgt ctcccccgcg gaggcgcctt tttttgttcg cgaggatatt
     3001 ggcggggggc ggattcgggc ctagcgttgt cccatgatcc ccctgctgca gaagcgctgg
     3061 ccgccggccg ccgaagtgcg gatcgatggc gaaaccgtcg cggttgaggt taaagtctca
     3121 agccgcgcaa ggagttaccg gctgtcgctg ccgcatggcg gacagccgct gctgaccgtt
     3181 cccaagttcg ggcggtgggg cgaggccaag gccttcctcg accgccacac gccgtggctg
     3241 gcgacgcgcc tcgagcgctc ggtcaagccg gtggcgttcg tgcgcggcgc catcgtgccg
     3301 ctgcgcggcg tcaagcaccg gatcgtcccc accggccggg tgcgcggcat ggtcgagatc
     3361 ggcgagcacg agggcgaata cgcgctgctg gtgcccggcg cgccggagca ccggtcgcgc
     3421 cggctgatcg actggctgaa gctcgaagcg cagaaggatc tcgagcggcg ctgccgcatc
     3481 cacgccgcga cgctggacgt gaccgtcaag tcgatcgtga tgcgcagcca ggcgacgcgc
     3541 tggggctcat gctcgacgac gggcaagctc aacttcaact ggcggctgat cctcgcgccg
     3601 cctttcgtgc tcgactacgt ggcagcgcac gaagtggcgc acctcgtcga gatgaaccac
     3661 tcgccggact tctggaagac ggtggagatc gcgctgccga ccatggcgcg cggccgcgac
     3721 tggctgaagg cgcacggccg cgaactgatg gtctacggca tcgacggctg aggttcggcg
     3781 acggcctagc cgccaccgcc gaacaggccg gtcagcagat cgccaatggt cttgggcgag
     3841 cgcttggccg gcgcggcggg ctgctgcgag gcatccgccg acgcatcgga gggcagcgag
     3901 ccgccggcgg ccagtgcgga gatcggatcg ttgggaacga gcgcgctggc cggcaccgcg
     3961 gcggaggtcg cgtcgggcag gttctgcggc gtcatcccct catgcgcctt ggccatgaag
     4021 tcgctccaaa tctgcgtcgg cacggtgccg ccggcgaggt tggtgccggt gtcgtcgtcg
     4081 ttgccgagcc agacgccgca gaccatgcgg gcggtgaagc cgacgaacag ggcgtcgcgg
     4141 gccttctggc tggtgccggt cttgccgccg atctgccagc cggcgagctt ggcgtgcttg
     4201 ccggtgccga tgtcgagagc ggtcgagagc atgtcgttca tctcaccgac gacggccggg
     4261 gcgatgacct ggcccgggcc ggccggcacg gcgtcgtaga gcaccttgcc gtcggcggtc
     4321 tcgatgcggg tgacgacgtt ggcgatgaca ccattgccgc cattggcgaa gggcgcgtag
     4381 gcggccgtca gctcgagcag cgacacctcc tgggtgccga gcgcgatcga gggcaccgcc
     4441 tggagcggcg aggagatgcc catgcgctgg gcgacctcga ccaccttgtc ggggccgacg
     4501 ttccaggcca gctgggcggc gacggtgttg cgcgaatagg ccagcgcatc gcgcagcgtc
     4561 atcttgccca tgaacttgtt gtcggcgtcg ttgggcgacc agccattgat attgatcgca
     4621 tcgtcgtcgg cgatggtgtc aggggtgtag cccttctcca tggccgccat gtagacgaag
     4681 ggcttgaagg tcgagcccgg ctggcggcgg gcggtgacgg cgcggttgta ctggctctgc
     4741 tggtagtcgg cgccgccaac cacggcgcgc accgcgccat cggtatcgac ggcgaccagc
     4801 gcgccctggc tgaagtggta tttcggcccc tcggtggcga ccgcctcctt gaccaggaac
     4861 tcggcctgct tctgcaggtc ccagttgatg gtggtgtaga cgacgatgtc ctgcttgacg
     4921 tcgccgacat aggcctggac cagcgtgtcc acccagtcgg cgacatagga ttcggagccg
     4981 gcgaccttgg tccggatggt ctcgttggga tcgatggcgg cggccttggc ctcggcctcg
     5041 gagatgtagc cctcgtcgga catggcctgc agcacgacgt gctggcgggc gttgaccagg
     5101 gtggagtcgc ccttgggatt gaggttggac ggcgccttga ccgagccggc gaggatcgcc
     5161 gcctcgccca gcgacagatt gcgggcggaa tggccgaaat agaactgcga ggccgcctcg
     5221 atgccgacca tctggtggcc gaaatcgacg cggttgagat agagctcgag gatttcgtcc
     5281 ttggtgtagt tgtgctcgag ccagagggcg agcagcgcct cctgcacctt acggccgagg
     5341 gtctggtcgc gggtgaggaa gaggttcttg gcgagctgct gggtgagggt cgagccgccg
     5401 gcggcgatat ggcccttggt gaggttggac gccgcggcgc gaatgatgcc gatcgggtcg
     5461 atgccgaagt gctggtagaa gcgcttgtcc tcgatggcga tgaaggcggc ggggacgtat
     5521 tcgggcaggt ccttgagggc gatcgcctcg ccgcccatct tgccgcggtt ggagatcagc
     5581 tggccgtcgg cggcgacgat gcggatgttg gccggccgct cgggcaccgc ccaggtgctc
     5641 tgggccggca tctgcaggta gaaataggcc acgacggcgc cgacggcgac ggcgccccac
     5701 agcccgatca tgaacagcca gtaggcaagg gtcgcaaaga cccgcccgac ggtcagccgg
     5761 cggcgttcct ttttctggcg cggctgcttg cggcccttcg gcgcgcggcc gcggcggggc
     5821 ggcggctcgt cgtgctggtc gcgggtgaaa aagccgccgc cgaagccggg ttcgacgcgc
     5881 tcgttgcggg cggctttgcg ggatttcgcc ttcgccggtt tcgccttgcc gcggccgcgc
     5941 ccggtggcgc cgccgccgat gcgatcttcc ggcgaaatct cgaaatccat gaagcgggcc
     6001 ccggccttct tcttgcgcat cgcgacccgc tggctccgtg cgaggggtcg aacgcgctcg
     6061 tccaagcgca acagcggcca cgcggccggt acgaacccct gcgttcttga agctaaatgt
     6121 ggccggttta tgtgggctta aaaggctcga tccgccttgt ggcccaccgg tcacaccgga
     6181 ctagacgtcg aggttggcaa cgctgagcgc gttgtcctgg atgaaatcgc ggcgcggttc
     6241 caccaggtcg cccatcagct cgctgaacag ccggtcgtga tcgtcgctgt ccttgatctc
     6301 gaccttgagc agcgtacgga tccccggatc gagcgtggtc tcccacagct gctcggggtt
     6361 catttcgccg aggcccttgt agcgctgcag ggtcacgccc ttgcgtcccg ccgccgagac
     6421 ggtggcgaac agcgaggagg ggccgaagat ttcggtggtc gcgtccttgc ggacgagcgt
     6481 ggcgctgccg gtaaagatcg tgccgatgcg ctcgatcatc tggcgcatct tgcgggcgtc
     6541 ggcgctggcg aggagattgg cgtcgaactc gtggcgttcg gtgacgccgc gcacgacgcg
     6601 gctgaaaacg aggccgccct gcccgtcggg ttcgccctgc cagccccgct cgacctcgtc
     6661 ggcgatgaga tcgaggcggg tggcgatgcg gcggccgatc tccgccgccc gggccgggtc
     6721 ggccaccgct tccggatcga gggcgccgac gatcgccgcc tgctcgagga tggcgcggct
     6781 gtagcgggtg ttgaagcctt cgatctggtg gacgatgtcg cgcgcctcgc ggacgatctc
     6841 gagcaggtcg gcgccggcat ggaccgagcc ggcggccgag cggaacgacg cgtcggcgac
     6901 gccgccctcg accagatagt cctcgagcgc gcgctcgttc ttcagatatt gctcggacga
     6961 gccgcgcttg accttataga gcggcggctg ggcgatgtag atgtggccgc ggtcgatcag
     7021 ctcgcgcatc tgccggtaaa agaaggtgag gagcagcgtt ctgatgtggg cgccgtcgac
     7081 gtcggcgtcg gtcatgatga tgatgcggtg gtagcgcagt ttctcgatgt tgaattcctc
     7141 gcggccgatc gaggtgccga gcgccatcac cagattgccg atctgctcgg agcccagcat
     7201 gcggtcgaag cgcgcccgct cgacgttgag gatcttgccg cgcagcggca gcaccgcctg
     7261 ggtgtagcga tcgcggccct gcgaggcgga gccgccggca ctgtcgccct cgacgaggaa
     7321 cagttcggac ttggccgggt ccttctcgga gcagtccttg agcttgccgg cgaggaaatt
     7381 gacgtcgagc gccgatttgc ggcgggtcag ctcgcgggcc ttgcgcgccg cctcgcgggc
     7441 ggccgcggcc tcggcgacct tgccgacgac cagccgcgcc tcctgcggat gttcgtcgaa
     7501 ccactcggcg agcttctcgt tgacgacgtt ctcgacgacg ggccggacct cggaggagac
     7561 cagcttgtcc ttggtctgcg aggagaattt cggatccggc accttgaccg agagcacgca
     7621 ggtcagcccc tcgcgcgaat cctcgccgga cagggtgacc ttctcgcgct tcaggatgcc
     7681 gctcgcctcg gcataggtcg cgacctgccg ggtcagcgcc ccgcggaagc cggcgaggtg
     7741 ggtgccgccg tcgcgctgcg ggatgttgtt ggtgaaggcg aggacgttct cgtggtagct
     7801 gtcgttccac cacatcgcca cttcgacggt gatgccgtcc ttctcctgga tcaggtagat
     7861 cggcgctcca atgagcgggg tcttggcgct gtcgaggtag cgcacgaact cgatgaggcc
     7921 gccctcgtag tggagctcga cagtgaccgg ctcggggtgg cggaggtcgc gcagcacgat
     7981 gcggacgccg gaattgagga aggccagttc gcgcagccgg tgctcgagcg tcttgaagtc
     8041 gaactcgacc atagtgaagg tcgtggccgc cggcaggaag gtgatttcag tgccgctgcg
     8101 gccttcgtag gtgccggccg tcttgctggg ctcataggtg ccggtctgcc gcaggtcggc
     8161 ggtggcatcg ccgttggcga aatcgatctc gaataccttg ccgttgcggc ggatcttcag
     8221 cttcagccag accgagagcg cgttgaccac ggagacgccg acgccgtgca ggccgcccga
     8281 caccttgtag gaattctggt cgaacttgcc gccggcgtgc agctgcgtca tcaccacttc
     8341 gggcgtcgaa atgccctcgg tggggtgcat gtcggtgggg atgccgcggc cgttgtcgat
     8401 gacggtgcac gagccatccg gattgagcgt caccgtcacc aggtcggcat ggccggccag
     8461 cgcctcgtcg atggcgttgt cgacgacctc gtagaccatg tggtgcaggc ccgagccatc
     8521 gtcggtgtcg ccgatgtaca tgccggggcg cttgcggacg gcgtcgagcc ccttcagcac
     8581 cttgatggaa tcggcgccgt aggcatcggg atcggacgac gcaggcgggt tggctgcggg
     8641 agtgctcaaa aaggctccga atcaggggcg aaagccgctc gcggcgggtt tagcggatca
     8701 gggaaatcta cccaagagaa atggcatttt ctggccagat ttcaagggat ttggaggatt
     8761 ggccggcggc gccgttcaga gtcggaaggc cgggtggtag gggctgtcgg gattgacgtc
     8821 gtattcgacc attttcatgc aactttgtgc tgccgaatgc gaggcgccgg cgtgccaggg
     8881 gccatcgcgc agaaccacgt cgcggacatc ggcgaggcgc aggcatttcc agtcgccgga
     8941 cggcgggatc ggaccgtccg aggtgtcgcc gccgaactga aagaccagcg atttttcctc
     9001 gagaccggtc cgtcccagca ggatcgggca gagctcgcgg cgatggccct ggtagacgca
     9061 ggcgacctgc cgcctgccgc gcatggcggc gaggaacaat ccgtaggtgg cgctaggcat
     9121 cgagccggcc ctcgcgcacc gtcacccgcc gggcgcgccc ggccagcgcc gcgaacagca
     9181 tggcgtcggt gccggtcatc aggcactgcg tgtcgagcgc atcgagggcg gcaaacaggg
     9241 ccgcgcggcg gtcggggtcg agatgggcgg caatctcgtc cagcagcagg atcggggtga
     9301 tgccggtgcg cgccttgacc agccgcgcat gcgccaggat cagcccgacc agcagcgcct
     9361 tctgctcgcc ggtcgagccg agggcggccg gcagctgctt ttgcgcgtag gagacctcga
     9421 ggtcgacgcg gtgcgggccg tggacggtgc ggccggcggc gcggtcgagg ccgcgggagc
     9481 cggcccacag cgccaccagc tcggcctcga gcgcggcgga ggacaccggc tcgtggcggt
     9541 cgtcgaacag cggcgtcagc gccagcgcgg cggccggaaa cgccgtgtca tcgagacttt
     9601 cggcgatgcg cgcctcgaga tggccgatgg cgtcggcacg ggcgaaatgc agcgcggcgg
     9661 cgtgcgtcgc catttcggcc tcgagcgcgt cgagccagag cggatcggcg ttctcctcga
     9721 gcaggcggtt gcgctgccgg gtggccctgt cgtagtcggc aacggcggcc gaatgcgagg
     9781 ggaccagcgt cgtcaccagc cggtcgagga agcgccggcg gtcggtcgcg gggccggtaa
     9841 agagcccgtc catcgccggc gtcagccaga gcaggcgcag atagtcgctc agctgctcga
     9901 cggtgcgggc gttggcgccg ttgatgcgca cccgccgccc gccatcctcg gcggcgccgg
     9961 tgccgaggtc gaccggccca tcgggtgtct cgatcgtcgt cgccaccgcc caaggctggt
    10021 ccgaggcgag gttgccgagg ctgtcgaacg gcgcgcgccg caagccgcga ccgggcgaca
    10081 gcagcgaaat ggcctcgagc aggttggtct tgccggcgcc gttcggcccg gtcagcacca
    10141 ggtggcggcc gtcaaggtcg agggcggcgg actggtagtt gcggaaggcg ctgaggcgga
    10201 gccgcgagag gtatctggtc ggcatgctca acggccctgg cgaagaccgt gcctcgaaat
    10261 gccggtcaca cccgcatcgg catcagcacg tagagggcgc tggcgtcgcc gtcttcccgc
    10321 accagcgtgg gcgagcccga atccttgaac acgaagacgg cgttgtcgga gcggatctgg
    10381 ccgatgatgt cgagcaggta acgggcgttg aagccgatct cgaagctttc gggctcgaat
    10441 tcgacggcga cttcctcggt ggccgtgccg tgatccggat tggtgaccga gagctcgagg
    10501 ttgccgtcct tgaccgagag cttcaccgcc ttgccgccgc ggtcggaggc gatggtcgag
    10561 acgcggtcga cggcggtggc gaagctggcg cggtcgacgt tgagctgctt gtcgttgttc
    10621 ttgggggtca cccggtcgta atcggggaag gtgccttcga tcagcttgct gagcagcacg
    10681 aggccctcga gggtgaagcg gatcttggtg tccgagagct cgacgccgat atcgccctcg
    10741 acgccctcga gcagcttctg cacctcgccg acggtctttt tgggaatgat gatgccgggc
    10801 atgccgcggg cgccgtccgg ggcgtcggtc tcggaccggg ccatgcgatg gccgtcggtg
    10861 gcgacagcgc gcagcacctg cttcttattc acctcgaggg tgtggatgta gatgccgttg
    10921 aggtagtagc gcgtctcctc gttggagatg gcgaactggg tgcgctcgat gaggtcgcgc
    10981 agcgttgccg ccggcagcga gaagctgtgg ctgaaggtgc cggatttgag gtcggggaag
    11041 ctgtcggggc tgaggcacgc gaggtggaag cgcgagcggc ccgaggtcag cagcagctgt
    11101 tcggcgccgt cggtctcgag gcggacttcg gcgccatcgc tgagcttgcg gacgatttcg
    11161 tagagggtat gcgccggcac ggtggtggtg ccggcggtgg cgaccatggc ggggaccgat
    11221 tcggtgacct cgatgtcgag atcggtggcg cgcaggtcga gcttgccgtc ggcggccttg
    11281 agcaggacgt tggcgaggat cggataggtg ttgcggcgct cgacgacccg atggacgtgg
    11341 cccagcgact tgagcagagc gttgcgctcg agagtgactt tcattgcacg cgatcccccg
    11401 cccccgggag gcgaaaattc tcacgaaatc cgggctgcga ccttggcaat tcgggccgca
    11461 aaacgcaagc gcggcgggcc ggttgcggcc cgcgcgtccc cagtcttgtc cccctgcccg
    11521 tccgtcagga caggctgagc cggttgaggg cccgttcggc gcgtgccaaa cggcgctcgg
    11581 cctcgcgatc gcgctcggcg atgccggaca acatcgcctg ccagcgcgcc tcgttttcgg
    11641 cgcccgaaac gtcctcgacc tcgccgtcca gccagttgaa acggcggaca gccttacgca
    11701 cacgcaccac cagacgcggc aacacaccaa cctccgcacg caaaccgcaa cttgaactga
    11761 acgcaaccgc ccgacagggg cgaaaactca ctcctcgagc atgcgcttga gcagctcgat
    11821 ctcctgggtc aggtccgcat cgtccttcat catctgctcg accttgcgga ccgaatggag
    11881 gaccgtcgtg tgatcgcgcc cgccgaagcg ccggccgatc tcgggcagcg accgcgaggt
    11941 cagcgacttg gcgaggtaca tggcgatctg gcgcggccgg accacgtcgc gcgagcggcg
    12001 cgagctcaac agctcgttgc gcggcacctt gtagtggcgc gagacgatcc tgaggatatc
    12061 ctcgatgcgg acgcggcggg cctcgcgggc ccgcaccaga tcggcaaggg tgcgctcggc
    12121 gagggtgacg ctgatcggct cctgcgtcag ctgattggcc gccaccagcc ggttgacggc
    12181 gccatcgagg tcgcggccgt ggctgatgac gatatgcgag atgtagtcga tgacggccgg
    12241 cgggaagtgg acgccgaagc gcgcctgcgc cgtttcggcg cggcgggtga cgatcagccg
    12301 ccgcaaatcg agatcgaagc cggtgatcgg cacgacgagg ccgccggaca gccgcgagcg
    12361 cacccgctcg tcgagcattt ccaggtcgcg cggcggagcg tcgccggcca ccaccacctg
    12421 cttggcaccg gtcaacagag tgccgagcgt gtggccgaac tcggtggccg acttgccctg
    12481 gaggaactgc atatcgtcga tcagcagcag atcgacccgc cgcagccagt ccttcagcgt
    12541 gatcgccgac tgccgctgca cggcggtgat gaaatggtac atgaaatgat cggcggtgag
    12601 atagacgatg ttgcgccccg gctcggccgc gcccgccgcc caggcgatgg cgttgagcag
    12661 atgcgacttg cccagcccga cggtcgaatg gatgtagacc ggattgaaac tgaccgtgcc
    12721 gttgagcgcg gcgctcgcca cctgcttggc gatgccaagc gcaatttcgt tagaggggcc
    12781 ggcgacgaag ctgtcgaacg tcattttagg atcgagtgcg ctgcccgaca gcgcgtcgcc
    12841 gcgcggcggc gccagctcgc gcagcggctt ggctgccgga atcggcgccg cttcgggctc
    12901 gctcggctgc tcgaccgggg gcgaaagccg cggccgggcc tggccgttga tgcgcacggt
    12961 aaagtgcagg cgggcgattg ccgggtcctc ggaacggaac gtctcgagga ttttttcggc
    13021 gtaattggac tggatccagg agcagaggaa ccgcgtcggc acgctcagat gcgccttgtc
    13081 ctcgaccact tcctcgagct cgaggcgggc gaaccaggaa ttgaacacgt cctcgccgaa
    13141 gccggcccgc agccgcgccc ggacgcgctg gaacagttcc cgctcagtgc gtccctcgct
    13201 gccgctgccg ctcatgccgg taccgatccc gcccttgtag ccgttgccgt tcctgcccgt
    13261 ttcatcgcga ccgccgctcg cactaaccgc catcgtccat cgccccgctt tgccggcagg
    13321 agccctgaac gggctctctg aaattatcgt tccgcctgcc gccagggcag acaaattctc
    13381 cgcctgccgc gcaagaacgc acgcggccgg atcgcactct gttttactct gacaccgggg
    13441 acggacgccc cggctcgcct tatctcttgc gtcaacgcaa gacgataaac gcacacgcaa
    13501 agatcaacgc cgtggagtgt tctttcgaac cttccaccca ccacccgaag gtggcagctg
    13561 ctgctcttcg attaccccaa acactccgcc agtcgatggg accacaaaag gaaggaccgc
    13621 gttttcccta tcgacaaaat ttaccttaga ggggcgttcg gggggccgca actgactctt
    13681 tttcgccggg ctcgcttgac aggtccggag gtcggcggcg cggaaaatgc gttttcggga
    13741 ggcaccgcgg aggggccaaa ccaagcgtct gtgactcaat gacgattccg tgaatccggg
    13801 gtgcaccaga agcgtgttcc agaatccggg agaacagggg cacaaggaag attcatccaa
    13861 gggcgccggc gagggacctg agattcaaga cgattcccga aagggcacca gtgtcgcaga
    13921 aacgtcacag tgccgcgcgt cgggctgcgc gcggtgcagc gcgcacaaac aaaaaggctc
    13981 cccgcaggga gccttcgatc gagacgcgat ggccgtgggt ggatcaggcc ttgagggcct
    14041 tcacgcggtg gttgaggcgc gacaccttgc gggccgcgac gttggcgtgg acgatgccct
    14101 tgctcgccga gcgtgcaatc tccggctcgg ctgccttgag cgccgccatg gcctcgtcgt
    14161 gcttgccgcc ggcgatggct tcctcgacct tgcggatgaa ggtgcgcatg cgcgagcggc
    14221 gcgacttgtt gacctcggcg cgggcgacga tcttgcgggc cgacttcttg gcggacgggc
    14281 tgttggccat ttctggtcct cttggtccga cggtcgcggg ccggtggcgc gcgaaaggcc
    14341 ggagatgaaa tgaaatcggc ggcaccgggc cgccaaagct ggcgggtgta tagtcggcaa
    14401 gcccccgccg gtcaactgga ttcaggggtt tgaccggggt gcggggcgca gccttgaaga
    14461 ggctgcgctc tgtccctcgc gtccttcggt cgcgaggccc aaccgagggg gcttggcctg
    14521 ctctgtcccc tcgcgtcctt cggccgcgag cgccaaccga gggggcttgg cctgctctgt
    14581 ccctcgcgtc cttcggtcgc gagggccaac cgttaaggct tctggcagac cgggcagtag
    14641 aaggtcgagc ggccggactg gacgatgcgc ttgatcgtgc cggtgcagcc gggcgtggga
    14701 cagggctggc cctcgcggtc atagacggcg aaacggtgct ggaaatagcc ggggccgcca
    14761 tcggcagcgc ggaaatcccg cagcgtcgag ccgccggcct cgatcgcctc ggtgagcacg
    14821 gtgcggacgc cggtcgcgag cagatcgagc cgggcagagg gttttccgga cttgagcacg
    14881 agctttttgg cgggaacggt ggggcggatg tgggcccggt tcagcgcctc gctgacatag
    14941 atgttgccca gcccggcgac aacgcgctgg tcgagcaggg cggccttgac cggggccgcc
    15001 ttgccggcaa agcgcacggc catctcggcg gcgctgaagg cgttgcccag cggctcgggg
    15061 cccaatccct cgagataggg cgagtcctcc tcgcgggcga acaggtccat gaagccgaag
    15121 cgccggggat cggaatagat cagccgctcc cggccgtggc gtgggtgggt gagctcgatc
    15181 accacatggt cgtgcttgcc gtcctcggcg ggctcgtaat agcgggacgg ctccttgtac
    15241 ttgaagccgg cgaagcggaa ggcgccggtc atgccgaggt gacccagcca ggtcttgccg
    15301 ccgctcagcc ggaacagcag gtatttggca cgccggccga cgctggtgat ggtctggccc
    15361 tcgagccccc gggcgaagcc gcgcgggaac ggaaaccgca ggtccttgcg gttgagcgtc
    15421 accttgtcga tgcgggcgcc ttcgagatag ggggcgaggc cgcggcggac ggtttcgact
    15481 tcgggcagct cgggcatcgc tcaaccatgc gcggctaagg ccaattccaa gccgcgtgcg
    15541 ttctctatat atagccggca ggtcgagcaa aggcaggcgg atgacggaaa ccacgcattt
    15601 cggcgaacga acggtgccgc tgcaggacaa gcagggcctg gtcgacgacg tcttccacgc
    15661 tgtcgccgac cgctacgatc tgatgaacga tttgatgagc gggggcgtcc accggctgtg
    15721 gaaggacgcg ctggtggcgc gcctcgcgcc gccgcgcacc ggcaccctgc cctatcgcgt
    15781 cctcgacatg gccgggggca ccggcgacat cgccgagcgc atcctcaatg cctcggtggg
    15841 ctacgccgag ctgacggtgg ccgacatcaa cgccgacatg ctgcgggtgg gcgcggcgcg
    15901 ggcgcagaaa tggcgcttcg gggcgcaggc gacattcgtc gaagccaacg ccgaggcact
    15961 gccgttcgag gacgagagct tcgacgccta cacgatcgcc ttcggcatcc gcaacgtgcc
    16021 gcggatcgag gtggcgctgg gcgaggcgtt ccgcgtgctg aagcgcggcg gccggttcct
    16081 ctgcctggag ttttcggcgg tcgacgtgcc ggggctcgac cggctgtaca aggagtggtc
    16141 ggaccgggcg atcccgccga tcggccgggt ggtgaccggc gacgcgcagc cctaccagta
    16201 tctcatcgaa tccatccgca agtttccgcc gccggcccgc ttttcggcga tgctcgagaa
    16261 ggccggcttc cggcgcgtga cgcatacggc gatgaccggc aacgtcgcgg cgctgcatgc
    16321 ggcctggaaa ctgtagcgca tgacgctggg cgcgacgttc cggctgctgc gcgccggctt
    16381 catcctggcg cgcgagggcg cgttctcgat cgtcgacatc gcggcgctgc cgccggtgct
    16441 gcgcgccggg gtgcgcttcg gccggctgtt cgagcgcggc gcggtccggc gcaacgggcc
    16501 ggccgaccgc tttcgcgcgg cgctcgaccg gctggggccg acttatgtga agctcggcca
    16561 gacctttgcg acacgccccg acatcgtcgg cacggcagtg gccgagaacc tggcgcaact
    16621 gcaggacaag atggcgccgt tcgatccggc gctggtgccg gtgctgctgc gccaggcgct
    16681 gcacgaaaag gccgacgccc tcaccgaaat ctcgccgccg atcgccgcgg cctcgatcgc
    16741 gcaggtgcac aaggcggtgc tggtcgagga cggggtgcgg cgcacggtcg ccgtcaagat
    16801 cctgcggccg gggatcaagg agcggttccg cgccgatctc gacagctatt acgccggcgc
    16861 cgcgatggcc gagcgctggg cgccgtcgct gcggcggctg cggccgaccg acgtggtcag
    16921 gacgctcgac cggtcggcgc ggctcgagct cgacctgcgg ctcgaggcgg cggcgatctc
    16981 ggagatggcc gagaacatca aggacgacga aggcttcgtc atcccgacgg tgagctggga
    17041 ccagaccgcc gagacggtgc tgacgaccag ctggatggac ggcatcccga tccgcgagac
    17101 ggtggcgctc gacgccgcgg ggctcgaccg caaggagctc agccggagcc tgctgcaatc
    17161 gttcctgcgg cacgccatcc gcgacggctt cttccacgcc gacatgcacc cgggcaatct
    17221 cttcgccgat ccccggagcg gcgcgatcgt ggccgtcgat ttcggcatca tgggccgcat
    17281 ctcgcgccag gagcggcggt tcctcgccga catcctctac ggcttcatca cccgcgacta
    17341 ccggatgatc gccgagcgcc acttcgagat cggctatgtg ccaaggcacc agtcggtcga
    17401 cgatttcgcg ctggcgctgc gctcgatcgg cgagccgctg caggggcgca cggcgagcga
    17461 catctcgatg gcgaaagtgc tcggccagct gttcgccacg acggaactgt tcgacatgca
    17521 ggcgcggccg gagctggtgc tgctgcaaaa atccatggtg ctggtcgagg gggtgagccg
    17581 ggcgctcgat cccgatctca atatctggac ggtggccgag ccggtggtcg gcgatttcgt
    17641 gcggcgcgag gccggtccgc tcgggcggct cgaggaactg cgcgaccatg ccggggtggc
    17701 gatcgatacc atcggcaagc tgccgggcct ggtgcgccgg gccgaggcgg cgctcgacga
    17761 ctacgacgcc gaaaagcgct cgccggcgcg gcgccgtgcc gcccggatga tggttgccgg
    17821 cttctgggtg ctggtggtga tcgcgctggc gctgctgttc gcgctgttgt tccgctaggc
    17881 cggcgcttgc gggcccgatg gcttcgcccc tagattgccg tgacccagac gcagcgaggc
    17941 ctttgcagca tgcccggcga tattgagatc gcgctcagat ggctcgatca cggccgcggg
    18001 ctggcgctgc cacagcggca gagccccggt gccgccggtc tcgacctctg tgcggcgctc
    18061 ggcgtcgacg agacgctggt gctggcgccg ggccagcggg cgagcgtgcc ctgcggcttc
    18121 gccatggcgc tgccgccggg gcacgaagcg caggtgcggc cgcgctcggg tctcgcggcc
    18181 cggcacggtg tcacggtgct caatgcgccc ggcacgatcg acgccgatta tcgcggcgag
    18241 gtgaaggtca tcctcatcaa tcacggccag gaggatttcg tgctgcgccg cggcgaccgt
    18301 atcgcgcagc tggtggtggc gccggtgagc aacgccgtgt tcgccgaacg acagggcctc
    18361 gacgacacca gccgcggcag cggcggcttc ggctcgaccg gccgctaggt gcagcatttg
    18421 ccactgaccc cggaggagac ccgccgctac gcccgccacc tggtgctgcg cgatatcggc
    18481 ggggccgggc agcaggcgct gcaggcggcc cgcgtgctgg tggtgggtgc cggcgggctc
    18541 ggcagtccgg ccatc
//
LOCUS       DATAZA010000559         5837 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1148848, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000559 DATAZA010000000
VERSION     DATAZA010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5837
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1148848"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..416)
                     /locus_tag="VHZ56_13825"
     CDS             complement(<1..416)
                     /locus_tag="VHZ56_13825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299094.1"
                     /translation="MTLPAPWRRALLLVHVTSAVGLVGAVAGFLALALAGAGGDSGVY
                     GAMRVLTVEVIVPLAAASLVVGVASSLLTPWGLLRHYWVIAKLGLTAIAVLVLLLQLP
                     TISGLAEAAARGSLAGDSGDQLAMIGHAAGGLVVLLR"
     gene            complement(413..568)
                     /locus_tag="VHZ56_13830"
     CDS             complement(413..568)
                     /locus_tag="VHZ56_13830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299095.1"
                     /translation="MANRGNRSGTMPGWMKAGLGGAALLVLIALVMVAFGHNPLQHLG
                     GHLGMGG"
     gene            646..1227
                     /locus_tag="VHZ56_13835"
     CDS             646..1227
                     /locus_tag="VHZ56_13835"
                     /inference="COORDINATES: protein motif:HMM:NF044515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HEX4299096.1"
                     /translation="MPKLWTSTIETHHEAVYAAALDAAAALVADGGLPALTMSAVASR
                     AGIGRATLYKYFPDVATLAAAWHARQVAGHLRELQAAAARPGAAAARLHAVLEAYLRH
                     AFGHHGAHAAAPMLDHHRTAARDELRGFLAPLIAEAARAGSVRADVPADELAAYCLAA
                     LDAAAVPASRAATVRLLGLVETGLGLAPRAPRA"
     gene            complement(1295..1489)
                     /locus_tag="VHZ56_13840"
     CDS             complement(1295..1489)
                     /locus_tag="VHZ56_13840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299097.1"
                     /translation="MADRETIIDSGGDGRGNFGAGMLMTAVIVILLLIAGGYLVFNHG
                     GPSSSVTLNLPKVTVTAPKT"
     gene            complement(1562..2377)
                     /locus_tag="VHZ56_13845"
     CDS             complement(1562..2377)
                     /locus_tag="VHZ56_13845"
                     /inference="COORDINATES: protein motif:HMM:NF016296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HEX4299098.1"
                     /translation="MNGSPLQLALREMRGVFTSRLTRFGLIGAIVVLGISGPFGTYQA
                     LPVAQRFLYWAASVGLTYVVGQGVATFCIETLRPVIASRWPRVIVSALLTSLPVTAIV
                     IVLNSIAYWQVAPREWLGIWFYVTLVVLVVIGALVAFGHQLRQEVAAAVAAVPPADAG
                     AVNGAPVPPAILQRVPLPQRGRLLALIVEDHYVDIVTDRGKALVLMRLADAMRETGDV
                     PGLQIHRSHWVARDAVVQVRRSEGKLLLELSNGLCLPVSRGFLPAVKAAGLVA"
     gene            2488..2997
                     /locus_tag="VHZ56_13850"
     CDS             2488..2997
                     /locus_tag="VHZ56_13850"
                     /inference="COORDINATES: protein motif:HMM:NF042671.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6622 family protein"
                     /protein_id="HEX4299099.1"
                     /translation="MHAMPSLLAIITHTPLWVWALFAFVLFMGYQRTRDREVQLWRIL
                     LFPVLMGLLALSGLAGAGLGAVPGILVGLAIGGIAGWLMERDGATRRLAGGRLWLRGE
                     WWSLVQVAVILAFRYATAVIAAVDPALAADPTFHLVATFVSSLLAALVIARTAARLRV
                     YVTSAPVAA"
     gene            complement(3048..4157)
                     /locus_tag="VHZ56_13855"
     CDS             complement(3048..4157)
                     /locus_tag="VHZ56_13855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007538173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX4299100.1"
                     /translation="MAQGQRLGVGIIGAGNISSQYLKAMTAFPVLDIRGIADMRPAAA
                     AARAAEFGVVAKSVDELLADPAVDIIVNLTIPRAHAEVGLRAVAAGKHIYGEKPLGVS
                     FAEGKKLVAAADRRGVRIGSAPDTFLGGGHQTARAVIDSGKLGQIVGGTVFFGVPGHE
                     YWHPDPAFYYDVGGGPVLDMAPYYFTDLVNLLGPVKAVQAMSQTLRKKRPVLSEPKRG
                     QAMPVKVFTHVTGALQFVSGAIVTMTLSFDVPKHGHTPIEIYGLAASMLVPDPNWFGG
                     EVKIGKPRAEQWDDVPVTLPYADANYRSLGVADMAYAILGNRPHRASGALALHVLEVM
                     EAFETASKSGEVVKIRTRVERPAPLKQSIKRGRIS"
     gene            4256..4933
                     /locus_tag="VHZ56_13860"
     CDS             4256..4933
                     /locus_tag="VHZ56_13860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012091217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEX4299101.1"
                     /translation="MPPLPSTFDYRPPTEPWIDIVHEDERLIVCNKPSGLLTVPGKDP
                     SLADCLEARVQARYPWHRATKVVHRLDKDTSGLLLLAFDKPALGALGSQFEHRRVEKY
                     YVARVWGEVAGDSGVIDLPLATDWENKPRQRVDLEHGRAAQTRWEVLAREPGATRLKL
                     TPLTGRTHQLRVHMLALGHPIIGDTFYAEGPARDAAPRLQLHAEMLGFTHPQDHMWHS
                     FLRATPF"
     gene            5039..5221
                     /locus_tag="VHZ56_13865"
     CDS             5039..5221
                     /locus_tag="VHZ56_13865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299102.1"
                     /translation="MKRKTKQNQELEDSLAEGIASVMAATEALDEAPPDSSEMADLFL
                     EELNRLWAEPPAEQAA"
     gene            5267..5343
                     /locus_tag="VHZ56_13870"
     tRNA            5267..5343
                     /locus_tag="VHZ56_13870"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5301..5303,aa:Arg,seq:ccg)
     gene            5488..>5837
                     /locus_tag="VHZ56_13875"
     CDS             5488..>5837
                     /locus_tag="VHZ56_13875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX4299103.1"
                     /translation="MHKERFGELVGGIYDAVIDPALWTDAVDAIRREFRFHIAMMGVS
                     KLPGNEIVVNVSANVPPAFVTSVVHYSSEMLELWGGLAGATRLVEEEPILNSTLLPPG
                     WRDNRYYLEWAKPQG"
BASE COUNT          907 a         2174 c         1900 g          856 t
ORIGIN      
        1 cgcagcagca cgaccagtcc gccggcggcg tggccgatca tcgccagctg gtcgcccgaa
       61 tcgccggcca gcgagccgcg cgccgcggct tcggcgagcc cggaaatcgt cggcagctgc
      121 aacagcagca cgagcaccgc gatcgccgtc agcccgagct tggcgatcac ccagtagtgg
      181 cgcagcaatc cccacggcgt gagcagcgag ctcgcgacgc cgacgaccag cgacgcggcg
      241 gccagcggca cgatcacctc gaccgtcagc acccgcatcg cgccatagac gccgctgtcg
      301 ccgccggcgc ccgccagtgc cagcgccagg aatcctgcca ccgcgccgac gaggcccacc
      361 gcgctcgtca catgcaccag cagcagcgcg cgccgccatg gcgccggcag cgtcatccgc
      421 ccatccccag gtgaccgccc agatgctgca gcgggttgtg gccgaacgcc accatgacca
      481 gcgcgatcag caccagcagc gccgccccac cgagcccggc cttcatccag cccggcatcg
      541 tcccgcttcg gtttccgcga tttgccattt gcccgtcctg cctgcatcat cgccgcagga
      601 tgatcgatac agcgtgtatt tgatcgagtc aatgtgtctg gaaaaatgcc gaagctttgg
      661 accagcacca tcgagaccca ccacgaggcg gtgtacgccg ccgcgctcga cgccgccgcg
      721 gccctcgtcg ccgatggcgg cctgccggcg ctgaccatgt cggcggtcgc ctcccgtgcc
      781 ggcatcgggc gcgccacgct ctacaaatac tttcccgatg tggcgaccct tgccgcggcc
      841 tggcacgccc gccaggtcgc cggacatctg cgcgagctgc aggccgccgc ggcgcgtccc
      901 ggtgccgccg cggcgcggct gcatgccgtt ctcgaggcct atctccgcca cgcctttggc
      961 caccatggcg cccacgccgc cgcgccgatg ctggaccacc accgcaccgc ggcccgcgac
     1021 gagctgcggg gcttcctcgc gccgctgatc gccgaagccg cccgggctgg atcggtgcgc
     1081 gccgacgtgc cggccgatga gctcgccgcc tattgcctcg ccgcgctcga tgccgccgca
     1141 gtgccggcga gccgtgcggc gacggtgcgg ctccttgggc tcgtcgagac cggcctcggc
     1201 ctcgcgccgc gtgccccccg cgcctgacgc tgccgatcgc cacaaaaaaa cggcggccga
     1261 agccgccgtg aaggtgagca gggggtgcgc gctcttatgt cttgggcgcc gtcaccgtga
     1321 ccttgggcag gttcagcgtc accgagctcg acgggccgcc atggttgaac accagatagc
     1381 cgccggcgat cagcagcagg atgacgatca ccgcggtcat cagcatcccg gcgccgaagt
     1441 tgccgcggcc gtccccaccg ctatcgatga tggtttcacg atcggccatg tgcgcgctcc
     1501 ttctattcgg gattgtcgga acgcaacgag ccggggggcg tccgggttcc gcgccccggc
     1561 gtcaggccac gagcccggcc gccttcaccg ccggcaggaa gccgcggctg accggcaggc
     1621 agaggccgtt gctgagctcg agcagcagct tcccctcgct gcggcggacc tgcaccaccg
     1681 cgtcgcgcgc cacccagtgc gagcggtgga tctggagtcc cggcacgtcg cctgtctcgc
     1741 gcatcgcgtc ggcgaggcgc atcagcacca gcgccttgcc gcggtcggtg acgatgtcga
     1801 cgtaatggtc ctcgacgatc agcgccagca gccggccgcg ctgcggcagc ggcacccgct
     1861 gcaggatggc ggggggcacc ggggcgccat tgacggcgcc ggcatcggca ggcggcacgg
     1921 cggcgacggc cgctgccacc tcctgccgca gctggtgccc gaacgccacc agcgcgccga
     1981 tcaccaccag caccaccagc gtcacgtaga accagatgcc gagccattcg cgcggcgcca
     2041 cctgccagta ggcgatggag ttgaggacga tgacgatcgc cgtcaccggc agcgaggtga
     2101 gcagcgccga aacgatcacc cgcggccagc gcgacgcaat caccggccgc agcgtctcga
     2161 tgcagaacgt cgcgacgccc tgcccgacga cataggtcag cccgacgctg gccgcccagt
     2221 agaggaagcg ctgcgccacc ggcagcgcct ggtaggtgcc gaacggaccg ctgattccga
     2281 gcaccacgat ggccccgatc agcccgaacc gcgtcaggcg cgaggtgaac acgccccgca
     2341 tttcgcgaag cgccagttgc agcgggctgc cgttcacgaa gtccccggtc ggttggcgaa
     2401 tttggcgttg cggccctgat ctagggcacg catctcagcc gcacaagccg cgctgcttcc
     2461 ggcgccgcgc ccgcaaaaga gatcaacatg cacgccatgc cgtcgctcct cgccatcatc
     2521 acccacaccc cgctctgggt ctgggcactg ttcgccttcg tcctcttcat gggctaccag
     2581 cgcacccgcg accgcgaggt gcagctctgg cgcatcctgc tgtttccggt gctgatgggc
     2641 ctgctggcgc tgagcggcct cgccggggcg ggccttggcg cggtgcccgg catcctcgtt
     2701 gggctggcca ttggcggcat cgccggctgg ctgatggagc gcgacggcgc cacccggcgc
     2761 ctcgccggcg ggcggctgtg gctgcgcggc gaatggtggt cgctggtgca ggtcgcggtc
     2821 atcctggcgt tccgctacgc caccgcggtc atcgcggcgg tggacccggc gctagccgcc
     2881 gatccgacct tccacctcgt cgcgaccttc gtgtcgagcc tgctggcggc cctcgtgatc
     2941 gcccgcacgg cggcgcggct gcgggtgtac gtcacctcgg cgccggtcgc cgcctgagcg
     3001 tcggcggacg aaagagcgcc ccggcatccc ggccggggcg ccgcaggtca ggaaatcctg
     3061 ccgcgcttga tcgactgctt gagcggcgcc gggcgctcga cgcgggtccg gatcttcacc
     3121 acctcgcccg atttgctggc cgtctcgaac gcttccatca cctcgagcac gtgcagcgcc
     3181 agcgctcccg aggcgcggtg cggccggttg ccgagaatgg cataggccat gtcggcgacc
     3241 cccagcgacc gataattggc atcggcatag ggcagcgtca ccggaacgtc gtcccactgc
     3301 tcggcccgcg gcttgccgat cttcacctcg ccgccgaacc agttgggatc gggcaccagc
     3361 atcgatgccg cgagcccgta gatttcgatc ggcgtgtggc cgtgcttggg cacgtcgaag
     3421 ctgagcgtca tggtgacgat ggcgcccgag acgaactgca gcgccccggt cacgtgcgtg
     3481 aacaccttga ccggcatcgc ctgcccgcgc ttcggctcgc tcagcaccgg ccgcttcttg
     3541 cgcagcgtct ggctcatcgc ctgcaccgcc ttgaccggcc cgagcaggtt gaccaggtcg
     3601 gtgaaataat acggcgccat gtcgagcacc gggccgccgc cgacatcgta gtagaaggcc
     3661 ggatcgggat gccagtattc gtgccccggc accccgaaga acactgttcc accaacgatc
     3721 tgcccgagct tgccgctgtc gatcacggcg cgcgccgtct ggtgcccgcc gccgaggaag
     3781 gtatccggcg ccgagccgat gcgcacgccg cgccggtccg ccgcggccac cagcttcttg
     3841 ccctcggcga agctcacccc gagcggcttt tcgccataga tgtgcttgcc cgcggcgacc
     3901 gcccgcagcc cgacctcggc atgcgcccgc ggaatggtga ggttgacgat gatgtcgacc
     3961 gccgggtcgg ccagcagctc gtccaccgat ttcgccacga cgccgaactc ggccgcccgc
     4021 gccgccgccg ccgccggccg catgtcggcg atgccgcgga tgtccagcac cgggaaggcg
     4081 gtcatcgcct tcaggtactg gctcgagatg tttcctgcgc cgatgatgcc gacgcccaga
     4141 cgctgccctt gggccatgca tggtcctccc cttgctgcag cccttgtagc gaagcggttt
     4201 gaacaggaaa ggccccgcgc cgcgacactc ccgataaaat cggctagagc gggccatgcc
     4261 gccgctgccc tcgaccttcg attaccgccc gccgaccgag ccgtggatcg acatcgtcca
     4321 cgaggacgag cggctgatcg tctgcaacaa gccgagcggc ctgctgaccg tgcccggcaa
     4381 ggatccctcg ctcgccgact gcctcgaggc acgcgtccag gcccgctacc cctggcaccg
     4441 ggcgaccaag gtcgtgcacc ggctcgacaa ggacacctcc ggcctgctgc tgctggcctt
     4501 cgacaagccg gcgctcggcg ccctcggcag ccagttcgag caccgccgcg tcgaaaagta
     4561 ttacgtcgcc cgcgtctggg gcgaggtcgc cggcgacagc ggcgtcatcg acctgccgct
     4621 tgccaccgac tgggagaaca agccgcgcca gcgcgtcgat ctcgagcacg gccgcgccgc
     4681 ccagacccgc tgggaagtcc tcgcccgcga gcccggcgcc acccggctga agctcacccc
     4741 gctcaccggc cgcacccacc agctgcgcgt ccacatgctg gcgctcggcc acccgatcat
     4801 cggcgacacc ttctatgccg agggtccggc gcgcgatgcg gcgccgcggc tgcaattgca
     4861 tgccgaaatg ctcggtttca cgcatccgca agaccatatg tggcacagct ttttgcgcgc
     4921 caccccgttc tgatcgatgg cgccggcccg cccgccacaa tctctccccg aaatctccca
     4981 tccgacgcca cgacccgcgc ctagcgtagt cgtggggccg cagcaggagt agtgcgtgat
     5041 gaagcgtaaa accaagcaga accaggagct tgaggacagc ctcgcggaag gaatcgcgag
     5101 cgtgatggcc gccaccgagg cattggacga ggcgccgccc gacagctccg aaatggccga
     5161 cctgttcctc gaggagctca accgcctgtg ggccgagccg cccgccgaac aggccgcctg
     5221 agcccgtctt gcgctcactg ccggggtcgc gtagacgtga ccccaggcac ccgtagctca
     5281 gctggataga gcgctgccct ccgaaggcag aggtcgcacg ttcgaatcgt gtcgggtgcg
     5341 ccaataaaat caaagcaggg ctcgaggcgt attccgcagg gcgtcgccga cggcggccgg
     5401 gagacggcag ctctcggccg tgaccgggca gttttaattt tccaagctcc gattccggcg
     5461 gctaaggtcc cgggcggagt acgcgggatg cacaaggaac ggttcggcga gctggtgggc
     5521 ggcatctacg atgccgtcat cgacccggcg ctgtggacgg atgccgtcga tgccattcgc
     5581 cgggaatttc gcttccacat cgccatgatg ggcgtgagca agctgccggg caacgagatc
     5641 gtggtcaacg tctccgccaa tgtcccgccg gccttcgtca ccagcgtcgt ccattacagc
     5701 agcgagatgc tcgaactgtg gggcggactc gccggcgcca cgcggctggt ggaggaggag
     5761 cccatcctca acagtacgct gctgcccccc ggctggcgcg acaaccgcta ctacctcgaa
     5821 tgggccaagc cccaggg
//
LOCUS       DATAZA010000560         2490 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3472155, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000560 DATAZA010000000
VERSION     DATAZA010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2490
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3472155"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..204)
                     /locus_tag="VHZ56_13880"
     CDS             complement(<1..204)
                     /locus_tag="VHZ56_13880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX4299104.1"
                     /translation="MRLDGRAIYISGGGHGIGRASALRLAGEGGRIAVADIDRAAAEG
                     VAAEIVAGGGTGFATICDLTSATS"
     gene            complement(233..1204)
                     /locus_tag="VHZ56_13885"
     CDS             complement(233..1204)
                     /locus_tag="VHZ56_13885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015340197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HEX4299105.1"
                     /translation="MTDRIKVLFDTDPGVDDAMALVLLARHPGFELVGVTTVFGNGGI
                     EVVTRNALVLKDRFGFAAPVSRGAAATLTGSATLHAAMVHGENGLGDVPLPAPKGSID
                     PRPAAQFIVDTVRAQPGEITIVAVGRMTNLALALALDPGIAGLVKAVVVMGGAFGRNG
                     HGGNVTPVAEANIFGDAPAADIVFGAGWPLTIVGLDVTQEVIMSRAYLEALRNDAGED
                     GQFVWDITRHYESFHAKAGHVAQGIFTHDPSAVGYVLHPAMFRVLRGQVRVATEGVAR
                     GQTILRPTGSFARATDFDGRPEVAVCVGVDSAAFLDFYRDTLVRKQG"
     gene            complement(1201..2193)
                     /gene="araD1"
                     /locus_tag="VHZ56_13890"
     CDS             complement(1201..2193)
                     /gene="araD1"
                     /locus_tag="VHZ56_13890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013636674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraD1 family protein"
                     /protein_id="HEX4299106.1"
                     /translation="MNLIQFSKDNGKRAVGVVDGGAGHVVSGAKSVYALALEAAERKM
                     KLAALIKEKGLGKAIDAAAILGEGRMLPPIDHPDPAHLYVTGTGLTHLGSASTRDAMH
                     KSDQQAAEAPLTDSMKMFRMGLEGGKPAPGTEGVQPEWFYKGNGAIVANPEGPIPSPA
                     FARDAGEEPEIAGIYVIGKTGTPYRLGFALGNEFSDHVTERVNYLYLAHSKLRSCAFG
                     PELRLGDLPRSVSGMSRIRRGGKVVWEKPFLSGEDNMSHTIANLEHHHFKYHLFRQPG
                     DIHVHMFGTATLSFADGIKTEPGDVFEIEEAQFGLPLRNSVAWDKAETVKVKAL"
BASE COUNT          399 a          901 c          771 g          419 t
ORIGIN      
        1 cgacgtcgcg ctggtcaggt cgcaaatggt cgcaaacccc gtgccgccgc ctgccacgat
       61 ctcggcggca acaccttcgg ccgccgcccg atcgatgtcg gccacggcga tccgtccgcc
      121 ttcgccggcg agccgcaggg cactggcccg gccgatgccg tgtccgccgc cgctgatgta
      181 gatcgcccgg ccgtctaacc gcatgagtat ctccggggtg cgcgcgcccg cgctagcctt
      241 gcttccgcac cagcgtgtcg cggtagaaat cgaggaacgc cgcgctgtcg acgccgacgc
      301 acaccgcgac ttccggccgg ccatcgaaat ccgtcgcccg cgcgaagctg ccggtcggtc
      361 gcaagatcgt ctgcccgcgc gccacgcctt cggtcgcgac ccgcacctgt ccccgcagca
      421 cccggaacat cgccgggtgc agcacatatc ccacggcgct cggatcgtgc gtgaagattc
      481 cctgcgccac atgccccgcc ttggcgtgaa agctctcgta gtgccgcgtg atgtcccaga
      541 cgaactggcc gtcttcgccc gcatcattcc gcagcgcctc gagataggcg cggctcatga
      601 tgacctcctg cgtcacgtcg agcccgacga tggtcagcgg ccagccggcg ccgaacacga
      661 tgtcggcggc cggcgcatcg ccgaagatgt tggcttcggc cactggcgtg acgttgccgc
      721 catggccgtt gcggccgaag gcgccgccca tcaccacgac tgctttgacc agcccggcga
      781 taccgggatc gagcgccagc gccagcgcca gattggtcat ccgcccgacc gcgacgatgg
      841 tgatctcgcc cggctgcgcc cgcacggtat cgacgatgaa ctgcgccgcc ggccgcggat
      901 cgatcgagcc tttcggcgcc ggcagcggca cgtcgcccag cccgttttcg ccatgcacca
      961 tcgccgcgtg cagcgtcgcc gatccggtga gcgtcgcggc cgcgccgcgg gagaccggcg
     1021 cggcgaagcc gaaacggtcc ttgagcacca gcgcgttgcg cgtcaccacc tcgatgccgc
     1081 cattgccgaa caccgtggtg acgccgacca gttcgaaccc cggatgccgc gccagcagca
     1141 ccagcgccat ggcgtcgtcg acacccggat cggtgtcgaa caggaccttg atcctgtcgg
     1201 tcacagcgcc ttgaccttga ccgtctcggc cttgtcccac gccaccgagt tcctgagggg
     1261 cagcccgaac tgcgcctcct cgatctcgaa cacgtcgccc ggctcggtct tgatgccgtc
     1321 ggcaaagctc agcgtcgccg tgccgaacat gtggacgtgg atgtcccccg gctgccggaa
     1381 caggtggtac ttgaagtggt ggtgctcgag gttggcgatg gtgtggctca tattgtcctc
     1441 gccactgagg aacggcttct cccacaccac cttgccgccg cgccggatcc gcgacatgcc
     1501 gctgacgctg cgcggcaagt ctcccagccg cagttccggc ccgaaggcgc aggacctcag
     1561 cttcgagtgg gcgaggtaga gatagttcac ccgctccgtc acgtggtccg agaactcgtt
     1621 gccgagcgca aagcccagcc ggtagggcgt gccggtcttg ccgatcacat agatgccggc
     1681 gatttccggc tcctcgcccg cgtccctggc gaaggccggg gaggggatcg gcccctcggg
     1741 attggcgacg atcgcgccat tgcccttgta gaaccattcg ggctgcacgc cttcggtgcc
     1801 cggcgccggc ttgccgccct cgagccccat gcggaacatc ttcatcgaat cggtgagcgg
     1861 cgcctctgcc gcctgctggt ccgacttgtg catcgcatcg cgcgtcgacg ccgagccgag
     1921 atgcgtcagc cccgtgccgg tgacgtaaag atgcgccgga tcgggatggt cgatcggcgg
     1981 cagcatgcgc ccttcgccga ggatcgccgc ggcgtcgatg gccttcccca gtcccttttc
     2041 cttgatcagc gcggcgagct tcatcttccg ctccgccgcc tcgagcgcca gcgcataaac
     2101 gcttttcgcc ccgctcacga catgccccgc gccgccgtcg accacgccca ccgcgcgctt
     2161 gccattgtcc ttgctgaact ggatcaggtt catcgtgctc gctccctgct gggtcgagca
     2221 ctaaccgcaa accgaggccg gcgagcaagg gcgaaagtac gattcttcct tcgggaaagc
     2281 tcgtcgcaca aactgagaca ctaccctcaa ccgccccttg acactttgga aacaaaatga
     2341 gaacaaagta agcacattcg atggacaggc catcgcgctt tccgggcgtc ttcgggcatg
     2401 gaataagggg agaatcgcaa tggctgcttc ggccgcaccg cttcgcgtca tcgagggttc
     2461 catggacaag gaaaaggcgc ttgccgcggc
//
LOCUS       DATAZA010000561         2201 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_452829, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000561 DATAZA010000000
VERSION     DATAZA010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_452829"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..363
                     /locus_tag="VHZ56_13895"
     CDS             <1..363
                     /locus_tag="VHZ56_13895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299107.1"
                     /translation="GWTIAINAKAADPATAFKVLTAIFDKKNFLDWTVTNHRMAVRSD
                     IATDPAYTADPYLAKATDLAKDTTGRDTVPGYEKVSALVQQATAEILDGKSVDDVVKE
                     YHDALVDEFGADKVVTIQ"
     gene            502..1347
                     /locus_tag="VHZ56_13900"
     CDS             502..1347
                     /locus_tag="VHZ56_13900"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX4299108.1"
                     /translation="MLVAMLPAIVMVAALVYFTGWAVTYSFTNLELTGFNSINWKWIG
                     FDNYVRLFTRQGFLSSLWVTVVFTFFSALVGQSVVGFALAASMRRLQGVGRTAVEVAV
                     MLGWLLPDIVAAFLWQATATRTGFINTLIIQPLGFPAYDFLANNALAVVIIANIWKGT
                     AWSYLLFSAALDSISREILEAARVDGATGLQRIWLVTLPIIRPHIATNMLFITIWTFT
                     YFPLIYALTGGGPGSATEVLSIFMYHQSFGVGKLGYGAAISVAMVLIVGALSIFYLRQ
                     LKEPK"
     gene            1347..2162
                     /locus_tag="VHZ56_13905"
     CDS             1347..2162
                     /locus_tag="VHZ56_13905"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX4299109.1"
                     /translation="MESYSRASPLTALALAFVAVIWVSPFAWLVTTAIDPKTRGILEV
                     PHAIGIDNFVSALSGTAGVQFLNSVWLSIGTATLTVVVAAAAAYPLARLTLPGKNLLL
                     WGLVLLRLLPAAGIIVPLYFSALTLHVLNTFGVMLALTVLNLPFALLLLKNFFDTVPI
                     ELEEAAYVEGASVWQIVTQIVVPLSRSGIAVVWFFSFTSAWNEFLLPLIFARTANSFP
                     MSVGLFAAFGDHGAVDYGFLAAYSLVYAAPAVAVYFLLRRNLNTGFAGVGVKG"
BASE COUNT          329 a          803 c          634 g          435 t
ORIGIN      
        1 ggctggacca tcgccatcaa cgccaaggcc gccgatccgg cgaccgcctt caaggtgctg
       61 accgcgatct tcgacaagaa gaacttcctc gactggacgg tcaccaacca ccgcatggcg
      121 gttcgcagcg acatcgccac cgatcccgcc tatacggccg acccgtatct cgccaaggcc
      181 accgatctcg ccaaggacac caccggccgc gacacggtgc ccggctacga gaaggtctcg
      241 gcgctggtgc agcaggcgac cgcggaaatc ctcgacggca agtcggtcga tgacgtggtc
      301 aaggaatatc acgatgccct cgtcgacgag ttcggcgcag acaaggtcgt gacgatccag
      361 tagaattcct ccctagactc cacccggacg gtgtggcggc ctggcagatt tgccagcgcc
      421 gccacatccg cccgggcttc cttgcaggcg ggtggaatga tggcgcagat gagtccgtgg
      481 ctgaggtcgg cgcgaggtcc gatgctcgta gccatgttgc cggccatcgt gatggtcgcc
      541 gccctcgtct acttcacggg ctgggccgtg acctacagct tcaccaatct cgagctcacc
      601 ggtttcaatt ccatcaactg gaaatggatc ggcttcgaca attacgtgcg cctgttcacc
      661 cgccagggct tcctgtcgtc gctctgggtc acggtggtct tcacgttctt ttcggccctg
      721 gtgggacaaa gcgtcgtcgg cttcgcgctt gccgcctcca tgcggcgcct gcagggcgtg
      781 gggcggaccg cggtcgaagt cgccgtcatg ctcggctggc tgctgcccga catcgtcgcc
      841 gccttcctct ggcaggcgac cgccacccgc accggcttca tcaacaccct gatcatccag
      901 ccgctcggct ttccggccta cgacttcctc gccaacaacg ccctggcggt cgtcatcatc
      961 gccaacatct ggaagggcac ggcctggtcc tacctgctgt tctcggcggc gctcgattcg
     1021 atctcccgcg aaatcctcga ggcggcgcgc gtcgatggcg cgaccggcct gcagcgcatc
     1081 tggctggtga cgctgccgat catccgcccg cacatcgcca ccaacatgct gttcatcacc
     1141 atctggacct tcacctactt cccgctgatc tacgcgctca ccggcggcgg tcccggcagt
     1201 gccaccgagg tcctgtcgat cttcatgtac caccagtcct tcggcgtcgg gaaactcggc
     1261 tacggcgccg ccatttcggt cgccatggtc ctgatcgtcg gggcgctgtc gatcttctac
     1321 ctgcgccagt tgaaggagcc caaataatgg aatcctacag ccgcgccagc ccgctcaccg
     1381 ccctcgccct ggcctttgtc gcggtgatct gggtcagccc cttcgcctgg ctggtcacca
     1441 ccgcgatcga tcccaagacc aggggcatcc tcgaggtccc gcatgccatc ggcatcgaca
     1501 acttcgtcag cgccctgagc ggcaccgccg gcgtgcagtt cctgaactcg gtctggctca
     1561 gcatcggcac cgcaacgctc accgtcgtcg ttgccgcggc cgcggcctat ccgctggcgc
     1621 ggctcaccct gccgggcaag aacctgctgc tctggggcct cgtgctgctg cgcctgctgc
     1681 cggcggccgg catcatcgtg ccgctctact tcagcgccct gaccctgcac gtgctcaata
     1741 ccttcggcgt catgctggcg ctgaccgtgc tcaacctgcc gttcgccctg ctgctgctca
     1801 agaacttctt cgacaccgtg ccgatcgagc tcgaggaggc ggcctacgtc gagggcgcca
     1861 gcgtctggca gatcgtcacc cagatcgtcg tgccgctgtc gcgctccggc attgccgtgg
     1921 tctggttctt ctcctttacc agcgcctgga acgaatttct gctgccgctg atctttgcgc
     1981 gcaccgccaa ctccttcccg atgtcggtcg gcctgttcgc cgccttcggc gatcatggcg
     2041 cggtcgacta cggcttcctt gccgcctatt cgctggtcta cgccgccccc gccgtcgcgg
     2101 tgtatttcct gcttcgccgc aacctcaaca cgggctttgc cggcgtcggc gtcaagggct
     2161 gagcatggcc gaccgcatca ccgccgcccg ggtcatcgtc a
//
LOCUS       DATAZA010000562         3325 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1493986, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000562 DATAZA010000000
VERSION     DATAZA010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3325
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1493986"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..980)
                     /locus_tag="VHZ56_13910"
     CDS             complement(<1..980)
                     /locus_tag="VHZ56_13910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003525733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX4299110.1"
                     /translation="MRLKELASELGLSQTTVSRALNGYPEVSKATRQRVNEAADRLGY
                     RPNASAIRLATGRVGAIGMALPLERSLHFGPHVSEFLSGIGERLAQDEIDILVSPIDA
                     DDEIPVHRRLSASKRVDAVVLSAPTPDDPRIELLTDLGMPFILHGRTDLSVPHAWLDI
                     DNEGAFRRATSHLLDLGHRRIGMINGPADQTFALHREKGYRAALLARGVTPDPRLIAS
                     GRFTDEIGFRHAQNFLEQRPRPTAILAGSMMTALGVFRAIRAAGLVLGKDVSMIAHDD
                     VFPFLNADNMVPSMSTTRSSIRAAGFRVGELLQQLLAGKPRESIHELWPV"
     gene            1394..2653
                     /locus_tag="VHZ56_13915"
     CDS             1394..2653
                     /locus_tag="VHZ56_13915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008129027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4299111.1"
                     /translation="MAGLLSSVALLTAGSLATAASAVELHYTTGSTGNELAFLKSEFD
                     KFTAQTGDTVTIVPMPSSTTDQFAQYKLWLAAGNADVDVYQTDVIWAPQLADQFVDLT
                     AAAADEMKGEFPAIVQSQTVNGKLVALPAYTDAGVLYYRTDLLTKYNLKPPTTWDELT
                     SEAKTVMDGEHAAGNKDLWGFVFQGNAYEGLTCDALEWIKSFGGGQIVEPDGTISVNN
                     PKTVAALTLATSWVNTISPPGVLGYMEEESRGVWQTGNAVFMRNWPYAYALGNAADSP
                     IKGKFAISPLPAGPGGAPTATLGGWNVAVSKYSKNQADSIKLAMFVSSQAFQKDRAIQ
                     LSELPTWPALYDDADVAKAQPIMPGLKTAFANAAPRPSAPAKVKYNEVSSDFWSAVHD
                     TLSGNGSAQDNMDALEAKLTELKGSDW"
     gene            2828..>3325
                     /locus_tag="VHZ56_13920"
     CDS             2828..>3325
                     /locus_tag="VHZ56_13920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002967347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX4299112.1"
                     /translation="MVFLLPMMIALIVVAGWPLYRTIYFSFTDASLQNLPGAKFIGFH
                     NYFSWITLKSGKTFYSGVLADPQWWNAVWNTVRFAFFSVLLETIFGTIVALVLNAEFP
                     GRGIVRAAILIPWAIPTIVSAKMWGWMLNDQFGMINDLFLRMGLIHDKIAWTASNDTS
                     MIAVLV"
BASE COUNT          581 a         1077 c         1092 g          575 t
ORIGIN      
        1 tccaccggcc acaattcgtg gatcgactcg cgcggcttgc cggccagcaa ttgctgcagc
       61 agctcgccga cgcggaagcc ggcggcgcgg atcgaggacc gcgtggtcga catcgacggc
      121 accatgttgt cggcgttgag gaacgggaag acgtcgtcgt gggcgatcat cgatacgtcc
      181 ttgccaagca cgaggccggc ggcccggatg gcgcggaaga cgccgagcgc cgtcatcatc
      241 gagccggcga ggatggcggt cggccgcggc cgctgctcga ggaaattctg cgcgtggcgg
      301 aagccgattt catcggtgaa acggcctgat gcaatgagcc gcgggtcggg ggtgacgccg
      361 cgggccagca gcgccgcgcg atagcctttc tcgcggtgga gggcgaaggt ctggtccgcc
      421 gggccgttga tcatgccgat gcggcggtgg ccgagatcca gcaggtggct ggtggcgcgg
      481 cggaaggctc cctcgttgtc gatgtcgagc cacgcgtgcg gcacgctcag gtcggtgcgg
      541 ccgtgcagga tgaacggcat gcccagatcg gtcagcagtt cgatgcgcgg atcatccggg
      601 gtcggggccg acagcacgac ggcgtcgacg cgcttgctgg cgctcagccg gcgatgcacc
      661 ggaatctcgt cgtcggcgtc gatcggggag actagaatgt cgatctcgtc ctgcgccagg
      721 cgctcgccga tgccggagag gaactcgctg acatgcgggc cgaaatgcag gctccgttcg
      781 agcggcaggg ccatgccgat agccccgacc cggccggtag cgaggcggat ggcgctggcg
      841 ttgggacgat agcccagccg gtcggctgcc tcgttgacgc gctgccgcgt cgccttgctg
      901 acttcggggt agccgttgag cgcgcggctg acggtggtct gcgacaatcc gagttcgctg
      961 gcgagttcct tgaggcgcat cggtggtcgc tggcctccct gccaaagcgg tttcaaatat
     1021 cggccgttcg ggcgcggaca ttagcgcaat ttcggtcgcc gccaaggatg aaattgactt
     1081 acgtacctca cgccacggtc gagaggcgcc agccgatcat tcttctagcc ttttgagtta
     1141 taacgagaat ttgcagtcat cgcgccgctt tccgggcatt ttccgccgcc atgccctctt
     1201 gactcgcctt cgtcgctctg gatagttgcc gttcaaagcg ctttgggaga gcggcggtca
     1261 acgccagtat tccggatcgt ttttgcaggg aggacatcgg cggggaggat agcgctgcga
     1321 agtgctcgtc gacccgcacc tcccgtccaa caacatgctt tcgggaggct atccaatgaa
     1381 gctgaatgtg atgatggcgg ggctgctgag cagcgtcgcg ctgctgacgg cggggtcgct
     1441 ggcgactgcc gcctcggcgg tcgaactgca ctacaccacc ggttcgaccg gtaacgagct
     1501 cgcgttcctg aagagcgagt tcgacaagtt cacggcgcag accggcgaca cggtgacgat
     1561 cgtcccgatg ccgtcctcga ccaccgacca gttcgcccag tacaagctct ggctcgccgc
     1621 cggcaatgcc gacgtcgacg tctaccagac cgacgtcatc tgggcgccgc agctggccga
     1681 ccagttcgtc gacctcacgg cggcggctgc cgacgagatg aagggcgaat tcccggccat
     1741 cgtgcagagc cagacggtga acggcaagct ggttgccctg ccggcctaca ccgatgcggg
     1801 cgtgctctac taccgcaccg acctgctgac caagtacaac ctcaagccgc cgacgacctg
     1861 ggacgagctc accagcgaag ccaagaccgt catggatggc gagcatgccg ccggcaacaa
     1921 ggacctctgg ggcttcgtgt tccagggcaa cgcctatgaa gggctgacct gcgacgcact
     1981 ggagtggatc aagtccttcg gcggcggcca gatcgtcgag cccgatggca ccatctcggt
     2041 caacaacccg aagaccgtcg cggcgctgac gctggcgacc agctgggtca ataccatctc
     2101 cccgccgggc gtgctcggct acatggaaga ggaaagccgc ggcgtctggc agacgggcaa
     2161 tgcggtgttc atgcgcaact ggccgtacgc ctatgcgctc ggcaacgccg ctgactcgcc
     2221 gatcaagggc aagttcgcca tcagcccgct gccggccggc ccgggcggcg cgccgaccgc
     2281 aactctcggc ggctggaacg tcgccgtctc gaagtactcg aagaaccagg ccgattcgat
     2341 caagctggcg atgttcgtca gttcgcaggc cttccagaag gaccgcgcca tccagctctc
     2401 cgagctgccc acctggccgg ccctctatga cgacgccgac gtcgccaagg cgcagccgat
     2461 catgccgggc ctgaagactg cgttcgccaa cgccgcaccg cgcccgtcgg cgccggccaa
     2521 ggtcaagtac aacgaagtct ccagcgactt ctggtcggcc gtgcacgaca cgctgtcggg
     2581 caatggcagt gcgcaggaca acatggatgc gctcgaagcc aagctgaccg agctcaaggg
     2641 ctcggactgg taagaggcct cacgaacagg gccggcggcg cttcgggcgc cgtcggccac
     2701 gccgaatgcg gcattggcga aggggggcga gatgacgact gaaagcacgg cgccggtcat
     2761 cggcacgctg gtcaatccac acaagcagat tcgctcggag ctgttcgtct cccgcgcccg
     2821 cacggcgatg gtgttcctgc tgccgatgat gattgcgctg atcgtcgtgg ccggctggcc
     2881 gctctaccgc accatctact tctcgttcac cgacgcctcg ctgcagaacc ttcccggggc
     2941 gaagttcatc ggcttccaca actacttcag ctggatcacg ctgaagagcg gcaagacctt
     3001 ctactcgggc gtgctggccg acccgcaatg gtggaacgcg gtgtggaaca ccgttcgttt
     3061 tgcgttcttt tccgtgctgc tcgaaaccat cttcggcacc atcgtggcgc tcgtcctcaa
     3121 tgccgagttc cccggccgcg gcatcgtccg cgcggcgatc ctcattccct gggccatccc
     3181 gactatcgtc tccgccaaga tgtgggggtg gatgctcaac gaccagttcg gcatgatcaa
     3241 cgacctcttc ctcaggatgg ggctcatcca cgacaagatc gcctggacgg cgagcaacga
     3301 cacctcgatg atcgccgtgc tcgtc
//
LOCUS       DATAZA010000563         5136 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2656797, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000563 DATAZA010000000
VERSION     DATAZA010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5136
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2656797"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..706
                     /locus_tag="VHZ56_13925"
     CDS             <1..706
                     /locus_tag="VHZ56_13925"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4299113.1"
                     /translation="ALLKTRFNVNETLSSLMMTYVAIHLMNYLVTGPWKNRKGFSYPQ
                     TPTLTPDQQMPTLIPGTVVHYGVLFTVIIAIVMWVVMQRSVFGFQVRVVGAAPNAARH
                     GGFSQKMTVWLVFLLSGALAGLAGIFEVTGPYGQMTLGFPQNYGFTAIIVAFLGRLNP
                     LGVILAGIVMAITYVGGDLAQSAAQLPNASKGIFQAMVLFFLLASDILVRYRVRIVAT
                     APLAPAASPRAARETP"
     gene            703..1635
                     /locus_tag="VHZ56_13930"
     CDS             703..1635
                     /locus_tag="VHZ56_13930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007068678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4299114.1"
                     /translation="MSVDYIIAFIITVVGASTPILLAGLGELVTEKSGVLNLGVEGMM
                     LVGAIAGFATMDLTGNPWLAVLVAAAAGALVSMIFAVLTLSLSANQVATGLALTIFGT
                     GLSSLIGQGFTGHGIPTFDSVFPAALAQDRFGRVLFSYSPLVYFAIIMVFAVGWFLRR
                     TRSGLIVRAVGENDLSAHSIGYSVIGVRYAAVAFGGAMAGIGGAYFPLVLTPQWSEGL
                     TGGRGWIAVALVVFSGWRPGWLLVGAYFFGLLGTLELFAKAAGSGWTSILPSEAWAAF
                     PYLATVIVLAAISVSKSAGGNAPAMLGRPFIPTA"
     gene            1671..2756
                     /locus_tag="VHZ56_13935"
     CDS             1671..2756
                     /locus_tag="VHZ56_13935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019998037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX4299115.1"
                     /translation="MIRLNRRTFIAGAGAAVTLPMLAGRASAADPLKVGYIYVGPIND
                     GGWNTAHEAGRQAMLKALGDKVTSVYVENVAEGPDSERVMRDLVNQGCKLIYATSVGY
                     NDFALKVAQAFPDVKVEMCTGWNHADNLSNYNIRFHQARSIFGTMAAMLSKTGVGGYL
                     ATQAVPEVVSGINSFTIAARKVNPNWKTKVIWINTWYDPGKEADAARALIAQGADVLT
                     QHTDSPAAVQVCEKASIPTFGQGADQSAFGPTMCKSSSLDLWGSFYTTRTQAVLDGTW
                     KPDDTYWGMKEGALDIAPIVNVPADVKAAAEKVKAGWLDGSYNVYAGPIKAQDGTEKA
                     AAGAALDDGAILSMDWLAEGVDGPLPS"
     gene            2843..4066
                     /locus_tag="VHZ56_13940"
     CDS             2843..4066
                     /locus_tag="VHZ56_13940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007533907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urate hydroxylase PuuD"
                     /protein_id="HEX4299116.1"
                     /translation="MPDYAIFWEWLSFAVRWTHVITAIAWIGSSFYFIALDLGLRRTP
                     SLPPLAHGEEWQVHGGGFYHIQKYLVAPDFLPEHLTWFKWESYFTWISGFVLLVIVYY
                     FGADLFLIDKHVLDVPAWAGIVISLGSIVLGWYAYDLLCKSPIGRSTGGLMVALFVVL
                     TAMAYIYTLLFTGRAAMLHMGVFTATIMAANVAMIIIPNQKIVVADLKAGRTPDAKYG
                     KIAKQRSLHNNYLTLPVIFFMLSSHYPLAFATRWNWLIAALIFLEGAIIRHWFNTRHA
                     RKGNPHWTWGAAVVIFLVIAWLSSAGKPEDTVADIASASAMPFLAEPHFAAVKQVVDT
                     RCGECHSATPGYPGVFEAPKGVRLDSAAGIANHAEQIAMEAGFSTAMPPGNVSEITPE
                     ERALIVAWYRGATHS"
     gene            4063..>5136
                     /gene="guaD"
                     /locus_tag="VHZ56_13945"
     CDS             4063..>5136
                     /gene="guaD"
                     /locus_tag="VHZ56_13945"
                     /EC_number="3.5.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004682966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008892 - guanine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0006147 - guanine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanine deaminase"
                     /protein_id="HEX4299117.1"
                     /translation="MSHDPQSVTVLRGRVLTFIEEPQSPDDSASYRYIEDGAVVIRDG
                     KIIMIGPFRPEAAAHHKVVDHRPNLIMAGFIDPHIHFPQMQVIGSYAANLLEWLNTYT
                     FVEEQKFAEPGHARRIASRFFDELIRHGTTTAAAYCSVHPQSVDAFFAEAAQRDMLML
                     GGKVMMDRNAPAAVCDTPQSSYDDSKRLLEAWHGKGRARYVISPRFAITSSPEQLEMA
                     EALAREFPDVHIQTHVDENLAEIELARELYPNLKDYLGIYERYHLLGPKTLLGHCIHL
                     THRECEVLAETRSVAVWCPTSNLFIGSGLFDHDRLAGYGARIAIATDVGGGTSYSMLR
                     TLDEGYKVMQARGQRLNPLRSFYM"
BASE COUNT          868 a         1644 c         1697 g          927 t
ORIGIN      
        1 ggctttgctc aagacacggt tcaacgtcaa tgagacgctg tcgagcctga tgatgactta
       61 tgtcgccatc cacctgatga actatctggt gacggggccg tggaagaacc gcaaggggtt
      121 cagctacccg cagacgccga ccctgacgcc cgaccagcag atgccgacgt tgatcccggg
      181 gaccgtggtc cactacggcg tgctgttcac ggtgatcatc gccatcgtca tgtgggtggt
      241 gatgcagcgc tcggtgttcg ggttccaggt ccgggtggtc ggcgcggcgc cgaacgcggc
      301 ccggcatggc ggcttcagcc agaagatgac ggtgtggctg gtgttcctgc tgtccggcgc
      361 gctggcgggg ctcgcgggca tcttcgaggt cacgggcccc tacgggcaga tgacgctcgg
      421 ttttccgcag aactacgggt tcaccgccat catcgtcgcc ttcctgggac ggctcaatcc
      481 gctgggagtg atccttgcgg gcatcgtcat ggccatcacc tatgtcggcg gtgacctggc
      541 gcaatcggcg gcgcaactgc ccaacgccag caagggcatc ttccaggcca tggtgctgtt
      601 cttcctgctg gcgagcgaca ttctcgtccg ctaccgggtg cggatcgtcg ccacggcgcc
      661 gctggcgcct gccgcttcgc cgcgggcggc gcgggaaacg ccatgagcgt cgactacatc
      721 attgccttca tcatcaccgt cgtgggggca tcgacgccga tcctgctggc cgggctcgga
      781 gagctggtga ctgaaaagag cggtgttctg aatctgggtg tcgagggcat gatgctggtc
      841 ggcgccatcg ccggtttcgc gacgatggac ctgacgggca atccgtggct ggcagtgctg
      901 gtggccgccg cggcgggcgc cctggtgtcg atgattttcg ccgtgctgac gctgtcgctc
      961 tccgccaacc aggtggcaac cggcctggcg ttgacgatct tcggcacggg gctgtcgtcg
     1021 ctgatcgggc agggcttcac cggccacggc atcccgacgt tcgacagcgt gtttcctgcg
     1081 gcgctggcgc aggaccggtt cgggcgggtg ttgttctcgt attcgccgct ggtttatttc
     1141 gccatcatca tggtgtttgc ggtgggctgg ttcctgcgcc gcacgcggag cgggctgatc
     1201 gtcagggcgg tcggcgagaa cgacctcagc gcccattcca tcggctattc agtgattggc
     1261 gtgcgctatg cggcggtggc cttcggtggc gccatggcgg gaatcggggg cgcctatttt
     1321 ccgctggtgc tgacgccgca atggtcggaa ggcctgacgg gcggacgcgg ctggatcgcc
     1381 gtcgccctgg tggtgttctc aggctggcgc ccgggctggc tgctggtcgg cgcctacttc
     1441 ttcgggctgc ttggcacact cgagctcttc gccaaggccg ccgggtcggg ctggacttcg
     1501 atcctcccct cggaggcctg ggcggccttt ccctacctcg caacggtgat cgtcctcgcg
     1561 gcgatctcgg tcagcaaatc cgcgggagga aacgcgccgg ccatgctcgg caggccgttt
     1621 atccccacgg catagaaacg aagcagacaa aagatcaaca ggagcacgtc atgatcagac
     1681 taaatcgacg cactttcatt gccggagcgg gcgccgccgt cacgctgccg atgctggccg
     1741 gccgtgccag cgctgccgac ccgctgaagg tcggttacat ctatgtcggc ccgatcaacg
     1801 atggcggctg gaacacggcc cacgaagccg gccggcaagc catgctcaag gcgctcggcg
     1861 acaaggttac ctcggtctat gtcgagaacg tcgccgaggg cccggacagc gagcgcgtca
     1921 tgcgcgatct cgtcaaccag gggtgcaagc tgatctacgc gacctcggtc ggctacaacg
     1981 acttcgccct caaggtggcg caggcgttcc cggacgtgaa ggtcgagatg tgcacgggct
     2041 ggaaccatgc cgataatctc tcgaactaca acatccgctt ccaccaggcg cggtcgatct
     2101 tcggcaccat ggcggcgatg ctgagcaaga ctggcgtcgg tggctacctc gccacgcagg
     2161 ccgttccgga agtcgtgtcg ggcatcaaca gcttcaccat agcggcgcgc aaggtgaacc
     2221 cgaactggaa gaccaaggtc atctggatca acacctggta cgatccgggc aaggaagccg
     2281 acgccgcccg tgcgctgatc gcgcagggtg ccgacgtgct gacgcagcat accgacagcc
     2341 cggccgccgt gcaggtgtgc gagaaggcca gcatcccgac gttcgggcag ggcgccgacc
     2401 agagtgcgtt cgggccgacc atgtgcaaga gctcttcgct cgacctgtgg ggctcgttct
     2461 acacgacccg gacgcaggcg gtgctcgacg gcacttggaa gcccgacgac acctattggg
     2521 gcatgaagga aggcgcgctc gacatcgccc cgatcgtcaa cgtgcccgcc gacgtcaagg
     2581 cggcggccga gaaggtcaag gccggctggc tcgatggcag ctacaatgtc tatgccggtc
     2641 cgatcaaggc gcaggacggg accgagaaag ccgcggccgg tgcggcgctc gacgacggcg
     2701 cgatcctcag catggactgg ctggccgaag gcgtcgacgg tccgctgccg tcgtaacagg
     2761 ctgggtttcg atcaagaagg ggcgggcgag agcccgcctc tttgtgtgtt aggccggcgc
     2821 ggcctgggag gacggacgac gaatgcccga ctacgcgatc ttctgggagt ggctgagctt
     2881 tgccgtgcgc tggacgcacg tcatcacagc cattgcctgg atcggatcgt cattctattt
     2941 catcgcgctt gatctcggcc tgcgccggac cccgagcctg ccgccgctgg cgcatggcga
     3001 ggaatggcag gtgcacggcg gcggcttcta tcacatccag aaatacctgg tggcccccga
     3061 tttcctgccg gagcatctga cctggttcaa atgggagagc tatttcacgt ggatcagcgg
     3121 cttcgtgctg ctggtgatcg tctattattt cggcgctgac ctcttcctca tcgacaagca
     3181 tgtgctcgac gtgcccgcct gggccggcat cgtcatttcg ctcggttcga tcgtcctcgg
     3241 ctggtacgcc tacgacctgc tctgcaagtc gccaatcggc cgatcgacgg gcggactgat
     3301 ggtggcgctg ttcgtggtgc tcacggcgat ggcgtacatc tacacgctgc tgttcaccgg
     3361 gcgggcggcg atgctgcaca tgggggtgtt caccgccacc atcatggccg ccaacgtcgc
     3421 catgatcatc attcccaacc agaagatcgt ggtcgccgat ctcaaggcgg gccgcacgcc
     3481 ggacgccaag tacggcaaga tcgccaagca gcgcagcctc cacaacaact acctgacgct
     3541 gccggtcatc ttcttcatgc tgtcgagcca ttatccgctg gcattcgcca cgaggtggaa
     3601 ctggctgatc gccgcgctga tcttcctcga gggcgcgatc atccggcact ggttcaacac
     3661 gcggcatgcg cgcaagggca acccgcactg gacctggggc gcggcggtgg tgatcttcct
     3721 cgtcatcgcg tggctgtcga gcgccggcaa gccggaggac acggtcgccg acatcgcctc
     3781 cgcgagcgcc atgccgttcc tcgcggagcc gcacttcgcc gcggtcaagc aggtcgtcga
     3841 cacgcgctgc ggcgagtgcc actcggcgac ccctggctat cccggcgtgt tcgaggctcc
     3901 aaaaggtgta cggctcgatt ctgcggcggg cattgccaac cacgccgagc agatcgcgat
     3961 ggaagcgggc ttctcgaccg ccatgccgcc gggcaatgtc agcgagatca cacccgagga
     4021 gcgagcgctc atcgtcgcgt ggtaccgcgg ggcgacgcac tcgtgagcca cgatccgcag
     4081 agcgtgacgg tgctccgggg gagggtgctg acattcatcg aggagccgca gagccccgat
     4141 gacagcgcca gctaccgcta catcgaggat ggggcggtgg tgatccgcga cggcaagatc
     4201 atcatgatcg gcccgtttcg ccccgaggct gcggcgcacc acaaggtggt cgaccaccgg
     4261 ccgaacctca tcatggcggg gttcatcgat ccgcacatcc atttcccgca gatgcaggtg
     4321 atcggttcgt acgccgcgaa cctgctcgag tggctcaaca cctacacatt cgtcgaagag
     4381 cagaaattcg cggagcccgg acacgcgcgc aggatcgcgt cacgcttctt cgacgaactg
     4441 atccggcacg gcacgacgac tgcggcggcg tactgctcgg tccatccgca gtcggtcgat
     4501 gcattcttcg ccgaggcggc gcagcgcgac atgctgatgc tgggcggcaa ggtgatgatg
     4561 gaccgcaacg cgccggcagc ggtctgcgac acgccgcaat cgagctatga cgacagcaaa
     4621 cggctgctcg aggcgtggca cggcaagggc cgggcgcgct atgtcatctc gccgcgcttc
     4681 gccatcacct ccagcccgga gcaactggag atggccgagg cgctggcgcg cgagtttcca
     4741 gacgtccaca tccagacgca tgtcgacgag aacctcgccg agatcgaact ggcccgcgag
     4801 ctctatccca acctcaagga ctatctcggc atctacgagc gctaccacct gctcgggccg
     4861 aaaacgctgc tcggccattg catccatctg acccaccgcg aatgcgaggt gctggccgaa
     4921 acgcggagcg ttgcggtctg gtgcccgacc agcaacctgt tcatcggctc gggtctgttc
     4981 gatcacgacc ggctcgcggg ctatggcgcg cgcatcgcga tcgccacgga tgtgggtggc
     5041 ggcaccagct attcgatgct gcgcacgctc gacgaaggct acaaggtgat gcaggcgcgg
     5101 ggacagcgtc tcaacccgct gcggtcgttc tacatg
//
LOCUS       DATAZA010000564         2898 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2076477, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000564 DATAZA010000000
VERSION     DATAZA010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2898
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2076477"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1392)
                     /locus_tag="VHZ56_13950"
     CDS             complement(<1..1392)
                     /locus_tag="VHZ56_13950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010911063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299118.1"
                     /translation="MTDLSLPSPAAALRPRLPLFLAVGLLAGAVIALQIAIMRVFAVG
                     SWAHFGSLVVSLAMLGFGLASVVISVGRKWFEAHWRVSATVALVLVGPLAVGANFIAQ
                     MVPFNAIFLVSDPDQKWRLLANFLLYLLPFLSGAFYLGIVFLKAGEGFGKVYFADLTG
                     SGLSSILVLGSMYLLPPEHMLSVPLLLWAAGMLIWVAEGGGRWRFAGATLVALLAVGA
                     YNLLPGLTGVPDIATSQYKGVAYARNFPDGRQIYRNVSPFGDLQIYASSYMHFAPGLS
                     DNAAFNIPEPPANSYVGMYVDGDGPDGIMRELPPADATYYKYLPMYYPYVIKQHPKTF
                     VVQFGGGISTVTALNAGSSSVTVAENNPAVLQAFRDPSLKDVTGNVLADPRVSVVDYD
                     GRLYLAHTDQRYDVVDLSLADSTGLSNPGGFSIVEKYGYTEEAMLSYMHALADGGVLS
                     ITLWDKEEPPKSIL"
     gene            complement(1468..2337)
                     /locus_tag="VHZ56_13955"
     CDS             complement(1468..2337)
                     /locus_tag="VHZ56_13955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019860603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HEX4299119.1"
                     /translation="MQRRDFLISSAGAALAAALPAVARANVPAPYDWTAMPPMDDRQG
                     FIDYMVKNRGEDPLYLGERFDRFQVMVRNKDLTDDKTKRAFLFTPREEFCLKANLARA
                     YDNDFLDINFGVTISGPHLVGRMTQQLDVKKGEKVLEIGTGSGYQSAFLANLTDNVHT
                     IEIIKPLQQRTDATYTDLTGRGYSEYSTITRENADGYYGWGDAGPFDKIIVTCGIDHI
                     PPSLLQQLQPNGVMLIPVGPPGAQHVLKVVKQQMADGTFNVSRSDIYNGRIVPFVPFT
                     KLDGDKIVGTHNG"
     gene            complement(2482..>2898)
                     /locus_tag="VHZ56_13960"
     CDS             complement(2482..>2898)
                     /locus_tag="VHZ56_13960"
                     /inference="COORDINATES: protein motif:HMM:NF014801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY-family carbohydrate kinase"
                     /protein_id="HEX4299120.1"
                     /translation="ARLDGRAGPAEMARSVLEGVAFSVRLAFEALQQSAGLRPQLANI
                     GGGGARSDAWCQIKADALGFGLRRARVADAAAMGAAILAGVGSGAMPSLRQAIGSLVG
                     FDATFEPDPGRRAYYDDKFGKYRELYAALRGFNAGY"
BASE COUNT          504 a          942 c          994 g          458 t
ORIGIN      
        1 caggatcgac ttgggcggct cttccttgtc ccacagcgtg atcgacagca cgccgccatc
       61 ggcgagggcg tgcatgtagc tgagcatcgc ctcttcggtg tagccgtact tctcgacgat
      121 cgagaagccg ccgggattgg acaggccggt ggagtccgcg aggctgaggt cgacgacatc
      181 gtagcgctgg tcggtatgcg ccaggtagag ccggccatcg taatcgacga cgctgacccg
      241 cgggtcggcc agcacgttgc cggtcacgtc cttgagcgag ggatcgcgga aggcctgcag
      301 caccgccgga ttgttctcgg cgaccgtcac cgacgacgat ccggcgttga gcgccgtcac
      361 cgtcgaaatg ccaccgccga actgcaccac gaaggtcttg gggtgctgct tgatgacgta
      421 cggatagtac atcggcaggt atttgtaata ggtcgcgtcg gccggcggca gctcgcgcat
      481 gatgccgtcc ggcccgtcgc catcgacata catgccgaca tagctgttgg ccggcggctc
      541 ggggatgttg aacgccgcat tgtcggacag ccccggcgcg aaatgcatgt aggagctggc
      601 gtagatctgc aggtccccga acggcgacac gttgcggtag atctggcgtc cgtcggggaa
      661 gttgcgggca taggcgacgc ccttgtactg cgaggtcgcg atgtcgggca cgccggtgag
      721 gcccggcagc agattgtagg cgccgaccgc cagcaatgcg accagcgtcg ccccggcgaa
      781 gcgccagcgg ccgccgccct ccgccaccca gatcagcatt ccagccgccc acagcagcag
      841 cggcaccgag agcatgtgct cgggcggcag caaatacatg ctgcccagca ccaggatgct
      901 cgacagcccc gagccggtga ggtcggcgaa atacaccttg ccgaagcctt cgccggcctt
      961 gaggaagacg atgccgagat agaacgcgcc ggacaggaag ggcagcaggt agagcaggaa
     1021 attggccagc agccgccatt tctggtcggg atcggacacc aggaagatgg cgttgaacgg
     1081 caccatctgg gcgatgaaat tggcgcccac cgcgagcggc ccgacgagca ccagcgccac
     1141 cgtcgccgac acccgccaat gcgcctcgaa ccatttgcgc ccgaccgaga tgacgacgct
     1201 cgcaagcccg aagccgagca tcgcgaggct gacgaccagc gagccgaaat gcgcccagct
     1261 gccgacggca aacacccgca tgatggcgat ctgcaatgcg atcacggcgc cggcgagcag
     1321 cccgaccgcg aggaacagcg gcagccgcgg ccgcagcgcg gcagcgggcg acggcaggga
     1381 aagatcggtc acggccatga ggctccggcg ggctgatgcg aggagaaccg gccggctcag
     1441 cctggcccgg ccggtcccgt cgacagttta gccgttgtgg gtgccgacga tcttgtcgcc
     1501 gtcgagcttg gtaaacggca cgaagggcac gatccggccg ttgtagatgt ccgaccggct
     1561 gacgttgaag gtgccgtcgg ccatctgctg cttcaccacc ttcagcacat gctgggcgcc
     1621 cggcggtccg accgggatca gcatcacgcc attgggctgc agctgctgca gcagtgaagg
     1681 cggaatgtgg tcgatgccgc aggtgacgat gatcttgtcg aacggtccgg cgtcgcccca
     1741 gccgtagtag ccgtcggcgt tctcgcgcgt gatcgtcgaa tactcggaat agccgcggcc
     1801 ggtgaggtcg gtgtaggtcg cgtcggtccg ctgctgcagc ggcttgatga tctcgatggt
     1861 gtggacgttg tcggtgaggt tggcgaggaa cgccgactgg tagcccgacc cggtgccgat
     1921 ctcgagcacc ttctcgccct tcttgacgtc gagctgctgg gtcatccggc cgacgaggtg
     1981 cgggccggaa atggtcaccc cgaaattgat gtcgaggaaa tcgttgtcgt aggcgcgcgc
     2041 gaggttggcc ttgaggcaga actcctcgcg cggcgtgaac aggaacgccc gcttggtctt
     2101 gtcgtcggtg aggtccttgt tgcgcaccat cacctggaag cggtcgaacc gctcgccgag
     2161 gtacagcggg tcctcgccgc gattcttgac catgtagtcg atgaacccct gccgatcgtc
     2221 catcggcggc atggcggtcc agtcataggg ggcaggcaca ttggcccggg cgacagcagg
     2281 aagcgccgcg gccaacgcgg ccccggcgga ggagatcagg aagtctcggc gttgcacgtt
     2341 tccctcgtgg aggtctgggg tggagccaag cctgtggcgc gctgctcgac gcgcgcccgc
     2401 actccatagc gtgattccgt ccgtcctgtg gcgccccggt aaagtattga tactgttgcg
     2461 tctgcgccac atgctggcgc ctcagtagcc ggcgttgaag ccgcgcagcg ccgcgtagag
     2521 ctcgcggtat tttccgaact tgtcgtcgta ataggcgcgg cgacccgggt caggctcgaa
     2581 tgtcgcgtcg aacccgacca ggctgccgat cgcctggcgc agcgacggca tggcgccgct
     2641 gccgacaccg gcgaggatcg ccgcccccat ggcggcagca tccgccaccc tcgcccgccg
     2701 cagcccgaag cccagcgcat cggccttgat ctggcaccag gcgtcggagc gcgcgccgcc
     2761 accgccgatg ttcgccagtt gcgggcggag gccggccgat tgctgcagcg cctcgaacgc
     2821 cagccggacg gaaaaggcga cgccctcgag cacgctgcgc gccatctccg ccggccccgc
     2881 ccggccatcg aggcgcgc
//
LOCUS       DATAZA010000565         6555 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2195808, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000565 DATAZA010000000
VERSION     DATAZA010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6555
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2195808"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..989)
                     /locus_tag="VHZ56_13965"
     CDS             complement(<1..989)
                     /locus_tag="VHZ56_13965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018067141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5054 domain-containing protein"
                     /protein_id="HEX4299121.1"
                     /translation="MRPTTIHLVFKTHLDIGFSNLARRVRQEYHEHFMPQAMATAEHF
                     YGEDPQRPRFIWTTGAWLIADYLANADPEGVARLERAIERGLIRWHALPFTTHSELMS
                     PALFRAGLSYSRDLDRRFGRTTTAAKMTDVPGHTRGIVPLLAEAGVRFLHLGVNEASP
                     VPDVPAVFRWRADTGEEVVVMYQDSYGGTYFPEGQAEGLSFAHTNDNAGPQTISQTAE
                     IHRQLQALHPDAEIVASTLDAYGELLWARREQLPVVDFEIGDSWIHGAGSDPGKISRF
                     LALQRLYDDFAGEGLTTQREAFGRTLALVPEHTWGVDIKTFLRDEDAWDRPDF"
     gene            1326..2804
                     /locus_tag="VHZ56_13970"
     CDS             1326..2804
                     /locus_tag="VHZ56_13970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019860457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEX4299122.1"
                     /translation="MKQSFPLDSVSLNRALPVPLHRQLYGRLRGMIEERVLAPGHALP
                     STRSLAEDLGVARNTVVSVYEQLSTEGYISARPGVPPTVVDLPERSTPEDRDRSKGRR
                     RLMSARGQLMLQQPSHHGAAGHLSFHPGMPDPESFPFSTWSRLLARRAKLARSDLFGT
                     YYVSGYPPLQRAIAGYLKVARGVRCRPEQIIITTGAQAALDLLARVLLDAGDTAWVEE
                     PGYYGAQAAFVAAGAQLAPLHVDAQGWRLQPPLNRTPRVIYVTPACQHPLGATMRMDQ
                     RLRLIELAERFDAFVIEDDFDGEYRFVGRPVQAMQGSDRSDRVIYLGTFAKLLFPALR
                     LGFMVVPEFLVPDISAVLSITGQFAPLLLQAALADFIDEGHMSVHLKRMRRIYATRRQ
                     IFRTHAQRELGEWMTLRPADAGIQFVGELRPGLSDVAIAAAARRRGLNISPLSMHYRH
                     VKPAPGLVLGYAAINEANMQAAFRTLRQAFAEAVSTKPAETP"
     gene            complement(2815..4677)
                     /locus_tag="VHZ56_13975"
     CDS             complement(2815..4677)
                     /locus_tag="VHZ56_13975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4299123.1"
                     /translation="MFNAIIDWFDQHYSPVALASDPQPPAGTSAFVMYFVRQFRTAVA
                     VRLVTVAASSLCDAMLPVFVGVVVGLLATTSPGAMFSANWPVLLVMLLVIGVGRPLVF
                     ILDKLMNNHAIEPAFISRIRWQSHFHVVRQSWTFFQNDFAGRVGTKVLQTGDAIEVAV
                     SGILDAVWYAVVFVIVAIVVLAGLDPLLLLPVAAWLALYGVLFAVAMPRIARQSAVVS
                     ESRSVMTGRIVDSYANIQTLKTFSSAAHEDQYVAESVIEQTAQYRRLMREFTYMWSVL
                     YLLNTGLVVAIAWLALAGWNAGTLSTTAVATAVPFALQIMNMSGWLLERGSNIFRQLG
                     NVRDSMETIAQPLALVDAPGAPALVVRQGEIVFDDVSFGYWRGKPGSVIEHFNLRIAP
                     GEKVGLVGRSGAGKSTLVNLTLRLFDVESGAIRIDGQDIREVTQESVRAAIGLVSQDT
                     SLLHRSIRENIKYGRQEATDEAMVAAAEQARIADFVAGQVDQKGRAGYDAHVGERGVK
                     LSGGQRQRIAIARVLLKNSPILILDEATSALDSEVEAAIQEQLATLMRGKTVIAIAHR
                     LSTVAAMDRLVVLDRGQIVEQGTHGELLARGGPYARLWHRQSGGFLTAGASQPE"
     gene            complement(5011..6417)
                     /locus_tag="VHZ56_13980"
     CDS             complement(5011..6417)
                     /locus_tag="VHZ56_13980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018857922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CehA/McbA family metallohydrolase"
                     /protein_id="HEX4299124.1"
                     /translation="MKRTIELRLTRQDKAAGFYHYAPFEVPEGTTRIDVALAFDRSGG
                     CELNFGLFDPTATEFPSAGGIRGWSPDFHETFFTATDDASPGYLWGPIVAGQWQLMIG
                     LGTIPTGGVTLRIEIGLDAAPRPTTPQPVRLEPVRKGAGWYRGDTHCHTFHSDADGSP
                     ETLHAAARQAGLDFLAVADHNTTSQRRYFYPASSPELVFVRAMEVTTHNGHANAFGVE
                     GMIDYRLTRPDDVHRLVEHVHARGGILSVNHDKPTIPWGYELPRVDCMEVWQSTWIEW
                     NWISLARYQHRLAAGLRISAIGGSDYHQPAELRPESPFVLARPTTVLWLEELSEAAII
                     AAMKAGHGYITEDPKGPHLAITADGQPMGSLLTEAREVRAEVRGAAGDRLVWIDASGA
                     LDSVVIGSDDWSTSFDTPARIATFIRAEIIAKASYERLYQIAEAALPEAPMVEQLVPI
                     MRQQAIRRAISNPIYFGH"
BASE COUNT          973 a         2345 c         2223 g         1014 t
ORIGIN      
        1 tcgaaatccg gccggtccca ggcgtcctcg tcccgcagga acgtcttgat gtcgacgccc
       61 caggtgtgct cgggaaccag cgccagcgtg cgcccgaatg cctcgcgctg cgtcgtcagt
      121 ccctcgccgg cgaagtcgtc gtagagtcgc tgcagcgcca agaaccggct gattttgccc
      181 gggtcggagc ccgcgccgtg gatccaggaa tcgccgatct cgaaatcgac caccgggagc
      241 tgctcgcggc gggcccacag cagctcgcca taggcatcga gcgtcgaggc gacgatttcc
      301 gcgtcgggat gcagggcctg cagctggcga tggatttcgg ccgtctgcga gatcgtctgc
      361 ggcccggcat tgtcgttggt gtgggcaaag ctcagcccct ccgcctggcc ttcggggaag
      421 tacgtcccgc cataggagtc ctggtacatg accacgactt cttcgccggt gtcggcgcgc
      481 cagcggaata ccgcgggcac gtcgggcacc ggcgacgcct cgttcacccc caggtgcagg
      541 aagcgcacac ccgcctcggc gagcagcgga acgatgcccc gcgtgtgccc cggaacgtcc
      601 gtcatcttcg ccgccgtcgt cgtccggccg aaccggcggt cgaggtcacg gctgtaggag
      661 agcccggcgc ggaacagggc cggcgacatc agctcggaat gcgtcgtgaa cggcagcgcg
      721 tgccagcgga tcaggccgcg ctcgatggcc cgctcgagcc gcgccacgcc ctccggatcg
      781 gcgttcgcca ggtagtcggc gatcagccag gcgccggtgg tccagatgaa tctcggccgc
      841 tgcgggtcct cgccgtagaa gtgctcggcc gtcgccatcg cctgcggcat gaaatgctcg
      901 tggtattcct gccggacccg ccgcgccaga ttgctgaagc cgatgtcgag atgggtcttg
      961 aacaccaggt ggatggtcgt cgggcgcatg atcgtcctcg ggttcgggct gctcgcatct
     1021 acgcggtctg gcggcgcggg gctacggccc gcggctggca cggcgcgaaa agcccgccgg
     1081 acgcggcgcc gccgacccaa cctccagatt ggttgcccgg caagggccag tcggcgcgcg
     1141 gatcgggggg ccagtggtga gccatggatc gactccggac cccgatcgcg tcccgcgacc
     1201 cggcgggctc gctggatcgt ggcggccgac ggaggcgctg cgtactggct ccttgctcga
     1261 accacaaatc gccccttgcg caaggaccgg caggtcgcga tgatccgggc aatcggggcg
     1321 gtgcgatgaa gcagtctttt cctctcgact ccgtctcgct caaccgcgcc ctgccggtgc
     1381 cgctgcaccg acagctctac ggccgtctcc gcggcatgat cgaggagcgc gtgctggcgc
     1441 cggggcatgc gctgccctcc acccggtcgc tggccgagga tctcggcgtt gcccgcaaca
     1501 ccgtcgtcag cgtctatgag cagctgtcga ccgagggcta catctcggcc cggcccggcg
     1561 tgccgccgac ggtcgtcgac ctgcccgagc ggagcacccc ggaggaccgt gatcgcagca
     1621 agggccggcg ccgcctgatg tcggcgcgcg gccagctgat gctgcagcag cccagccatc
     1681 acggcgccgc gggacacctg tcgttccatc cgggaatgcc ggaccccgag agctttccct
     1741 tcagcacctg gagccggctg ctggcgcggc gggccaagct cgcccgcagc gatctcttcg
     1801 gcacctatta cgtcagcggc tatccgcccc tgcagcgcgc catcgccggc tacctcaagg
     1861 tggcgcgcgg cgtgcgctgc cgccccgagc agatcatcat caccaccggc gcgcaggcgg
     1921 cgctcgacct gctggcgcgg gtgctgctgg atgccggcga caccgcctgg gtcgaggagc
     1981 cgggctatta cggcgcgcag gcggccttcg tcgccgccgg ggcccagctg gcgccgctcc
     2041 acgtcgacgc ccagggctgg cggctgcagc cgccgctgaa ccggacgccg cgggtgatct
     2101 acgtcacccc cgcctgccag cacccgctcg gcgcgacgat gcggatggac cagcgcctgc
     2161 gcctcatcga gctggcggag cgcttcgatg ccttcgtcat cgaggacgat ttcgacggcg
     2221 aataccgctt cgtcggccgc ccggtgcagg ccatgcaggg gtccgaccgg tccgaccggg
     2281 tgatctatct cggcaccttc gcaaaactgc tgttccccgc cctgcggctc ggcttcatgg
     2341 tggtgcccga attcctcgtg cccgacatct cggcggtgct gagcatcacc gggcagttcg
     2401 cgccgctgct gctgcaggcc gccctcgccg atttcatcga cgagggccac atgagcgtgc
     2461 acctgaagcg catgcgccgc atctacgcca cccgccggca gatttttcgc acccacgcgc
     2521 aacgcgagct tggcgaatgg atgacgctgc gcccggccga cgccggaatc cagttcgtcg
     2581 gcgagttgcg gccgggcctg agcgacgtcg cgatcgccgc cgccgcccgc cggcgcggcc
     2641 tgaacatctc gccgctgtcg atgcactacc ggcacgtcaa gccggctccg ggcctggtcc
     2701 tgggctatgc ggcgatcaac gaggccaaca tgcaggcggc gttccgcacg ctccgccagg
     2761 cctttgccga ggcggtctcg accaagccgg ccgaaacccc gtgaccgggc gccgctactc
     2821 cggctggctg gcgccggccg tgaggaagcc gccggactgc cgatgccaga gccgggcata
     2881 gggaccgccg cgcgccagca gttccccgtg cgtgccctgc tcgacgatct ggccgcggtc
     2941 gagcaccacc agccggtcca tcgccgcgac ggtcgacagc cggtgcgcga tggcgatcac
     3001 cgtcttgccc cgcatcagcg tcgccagttg ttcctggatc gccgcttcga cttcgctgtc
     3061 gagtgccgac gtcgcctcgt cgaggatcag gatcggcgag ttcttcagca gcacccgggc
     3121 gatggcgatg cgctggcgct gcccgccgct cagcttcacc ccgcgctcgc cgacatgcgc
     3181 gtcgtagccg gcgcgtccct tctggtccac ctggccggcg acgaagtcgg cgatccgggc
     3241 ctgctcggcg gcggcgacca tcgcttcgtc ggtcgcctcc tggcggccgt atttgatgtt
     3301 ctcgcggatc gagcgatgca gcagcgacgt gtcctggctg acgaggccga tcgccgcccg
     3361 gaccgattcc tgcgtcacct cgcggatgtc ctgcccgtcg atgcggatgg ccccggactc
     3421 gacgtcgaac agccgcagcg tcaggttgac gagggtcgac ttgccggccc cggagcgccc
     3481 gaccagcccg accttctcgc ccggcgcgat gcgcaggttg aagtgctcga tcaccgagcc
     3541 cggcttgccg cgccaatacc cgaagctgac gtcgtcgaag acgatctccc cctgccggac
     3601 gacaagggcc ggcgcgccgg gcgcatcgac cagcgccagc ggctgggcga tcgtctccat
     3661 cgagtcgcgc acattgccga gctgccggaa gatgttggag ccgcgctcga gcagccagcc
     3721 cgacatgttc atgatctgca gcgcaaacgg caccgccgtc gccaccgccg tggtcgacag
     3781 cgtaccggcg ttccagccgg caagcgccag ccaggcgatg gccaccacca gcccggtgtt
     3841 cagcaggtat aggaccgacc acatgtaggt gaactcgcgc atcagccggc gatactgcgc
     3901 cgtctgctcg atcaccgatt cggcgacgta ctggtcctcg tgcgccgccg acgagaacgt
     3961 cttcagcgtc tggatgttgg cgtagctgtc gacgatccgc ccggtcatca ccgaacgcga
     4021 ttccgacacc accgccgatt gccgggcgat gcgcggcatg gcgaccgcga acagcacgcc
     4081 atagagcgcc agccacgccg ccaccggcag cagcagcagc gggtcgagcc cggccagcac
     4141 cacgatcgcg acgatgacga agaccaccgc gtaccacacc gcgtcgagga tgccgctgac
     4201 cgccacctcg atggcatcgc cggtctgcag caccttggtg ccgacccggc cggcgaaatc
     4261 gttctggaag aacgtccagc tctgccgcac cacgtggaag tggctctgcc agcggatgcg
     4321 gctgatgaag gcgggctcga tcgcgtggtt gttcatcagc ttgtcgagga tgaacaccag
     4381 cggccggccg acgccgatga ccagcagcat gaccagcagc accggccagt tggcgctgaa
     4441 catcgccccg ggactggtcg tcgccagcag cccgacgacg acgccgacga acaccggcag
     4501 catggcgtcg cagagcgagc tggccgcgac ggtgaccagg cggacggcca cggccgtgcg
     4561 gaactggcgg acgaaataca tgacgaacgc cgacgtgccc gccggcggct gcgggtcgct
     4621 ggcgagggcc acgggcgaat agtgctggtc gaaccagtcg atgatggcgt tgaacatttt
     4681 ctcacagtcc gggccgcggg ccggaaggct ccgcgaggcc gcgcaaatcg ggatcgggtg
     4741 cgcaccgtgg cgcgcggggg gcgtggcagg cagcggggcc ggcgcaaccg gcaggcgccg
     4801 gtctgctcag gcgcgctgcg acggctgcct tcgacggaat ggccctgcca ggcgcacggg
     4861 gtttcgccgt ccccgcttcg gggtggcaac caggtcggct ccagcgtcgc gtctcatcga
     4921 gggtatccct ctgtatgagg aggcccggat tggctgttcc gcacataccg agcgatcggc
     4981 cgtcgagtca atccggcagg cgcggcgcga tcagtgcccg aaatagatcg gattgctgat
     5041 ggcgcggcgg atcgcctgct gccgcatgat cggcaccagc tgctcgacca tcggcgcctc
     5101 cggcagcgcc gcctcggcga tttggtacag ccgctcgtag cttgccttgg cgatgatctc
     5161 ggcccggatg aacgtcgcga tgcgggccgg cgtgtcgaag ctcgtgctcc agtcgtcgct
     5221 gccgatgacg acgctgtcga gcgccccgct ggcatcgatc cacaccagcc ggtcgccggc
     5281 ggcgccgcgc acttcggcgc gcacctcgcg ggcttccgtc agcaggctgc ccatcggctg
     5341 gccgtcggcg gtgattgcca gatgcgggcc cttgggatcc tcggtgatgt agccgtgccc
     5401 ggccttcatc gccgcgatga tggcggcttc ggacaattcc tcgagccaca gcacggtggt
     5461 tggccgcgcc aggacgaacg ggctttccgg ccgcaattcc gccggctggt gatagtcgct
     5521 gccgccaatc gccgagatgc gcagtcccgc cgccagccgg tgctggtagc gggccagcga
     5581 aatccagttc cactcgatcc atgtcgactg ccacacttcc atgcagtcga cccgcggcag
     5641 ctcgtagccc cacgggatcg tcggcttgtc gtggttgacc gacaggatgc cgccgcgcgc
     5701 atgcacgtgc tcgaccagcc ggtgcacgtc gtccggccgg gtgaggcggt agtcgatcat
     5761 gccctcgacc ccgaaggcgt tggcgtgccc gttgtgcgtg gtcacttcca tcgcccgcac
     5821 gaagaccagc tccggcgacg acgccggata gaaatagcgc cgctggctgg tggtgttgtg
     5881 gtcggccacg gcgaggaaat cgagccccgc ctggcgggcc gccgcgtgca gcgtttcggg
     5941 cgatccgtcg gcgtcggaat ggaaggtgtg gcagtgcgtg tcgccgcgat accagccggc
     6001 acccttgcgc accggctcga gccgcaccgg ctgcggcgtt gtcggccgcg gcgccgcgtc
     6061 gagcccgatc tcgatccgca gcgtcacccc gccggtcggg atggtgccga gcccgatcat
     6121 cagctgccac tggcccgcga cgatcggccc ccacagatag cccggcgacg catcgtcggt
     6181 cgccgtgaag aaggtctcgt ggaaatccgg cgaccagccg cggataccgc cggcgctcgg
     6241 aaactcggtg gccgtcggat cgaacaggcc gaaattcagc tcgcacccac cgctgcggtc
     6301 gaacgccagc gcgacgtcga tgcgcgtcgt cccctccggc acctcgaacg gcgcgtagtg
     6361 gtaaaacccc gccgccttgt cctgccgggt cagcctgagc tcgatggtgc gcttcatgcc
     6421 gcctttatgc atccgccccg gcagccaacc aagggccact ccgccggccg ccgcctggac
     6481 cagtgacgga actgtcatcc gccggcgggc aggccggtcc gtgccgatcg ccggtatctg
     6541 gttcttgttg ccggc
//
LOCUS       DATAZA010000566         1556 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1152539, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000566 DATAZA010000000
VERSION     DATAZA010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1152539"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..693)
                     /locus_tag="VHZ56_13985"
     CDS             complement(<1..693)
                     /locus_tag="VHZ56_13985"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006939321.1"
                     /note="adds enolpyruvyl to UDP-N-acetylglucosamine as a
                     component of cell wall formation; gram-positive bacteria
                     have 2 copies of MurA which are active; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEX4299125.1"
                     /translation="MDRIRLVGGNELRGEIPISGAKNAALPLMIASLLTSEPLTLENV
                     PRLADVKQLEKILENHGVDIAVHGRRPGADELSGQRMTFHAAEIVDTTAPYELVSVMR
                     ASFWVIGPLLARAHEARVSLPGGCAIGTRPVDLFLFGLKELGADIDIDEGYVVARAPR
                     GGLVGATIRFPKVSVGATHTIMMAATLARGTTVIENAAMEPEITNVAECLVAMGARIS
                     GIGTRTLTIEGVP"
     gene            complement(952..>1556)
                     /locus_tag="VHZ56_13990"
     CDS             complement(952..>1556)
                     /locus_tag="VHZ56_13990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299126.1"
                     /translation="HGEWPACMRFDLIVGDRRWRVQTGFVGTLMLTNVLAALSVVHAI
                     GHDLDRAVAELERLAPIRNRQGIVTGRDQHTYFVDTYKAALWSTGLIVADMANWGPAR
                     RILVLGDMSDVGHDQGRKYRRVLRQAAETADLVIATGASASRATGVGMPGKVVAAPTV
                     EDVRAVLATQPPSLVLLKGNNSFRLGGVVPSPVTAPLAAV"
BASE COUNT          247 a          507 c          552 g          250 t
ORIGIN      
        1 cggtacgccc tcgatggtga gggtgcgggt gccgatgccg gaaatcctgg cgcccatcgc
       61 cacgaggcat tccgcgacgt tggtgatttc gggctccatg gcggcgtttt cgatcaccgt
      121 ggtgccgcgg gcgagcgttg ccgccatcat gatggtgtgg gtggcgccaa ccgaaacctt
      181 ggggaagcgg atggtggcgc cgacgaggcc gccgcggggg gcccgggcga cgacatagcc
      241 ctcgtcgatg tcgatatcgg cgcccagttc cttgaggccg aagaggaaca ggtcgaccgg
      301 ccgggtgccg atggcgcagc cgccggggag agaaacgcgg gcttcgtggg cccgggccag
      361 cagcgggccg atgacccaga agctggcgcg catcaccgac accagctcgt agggcgcggt
      421 ggtgtcgacg atctcggcgg cgtggaatgt catgcgctgg ccactgagct cgtcggcgcc
      481 gggccggcgg ccgtgcacgg cgatatcgac gccatggttc tcgaggattt tctccagctg
      541 cttgacgtcg gcgagccgcg gcacgttttc gagggtcagc ggctcggacg tcagcagcga
      601 agcgatcatc agcggcagcg cggcattctt ggcgccggag atcgggatct cgccccgcaa
      661 ctcgttgccc ccgaccagac ggatgcgatc catgcgaatt ccccgaagcg gacgacgtcc
      721 gcgtgtgtgc tagcccgaag cagtccggcg gttcaagcag ggtcagcagc gtaaccgagt
      781 ccggttaaga agccttgccc gctttttcgc cccccgcacc aggcgggggc tgatccggcg
      841 cggtgccggc acgagcccgc gactgcccct tgcgtcgctg cagattctcg cgaagctttg
      901 tggccaatct ctgctcgcgg gccgcctttt cgtcggactt ggacatggcg ctcagaccgc
      961 cgccagtggc gccgtcaccg gcgagggaac gacgccgccg agcctgaagc tgttgttgcc
     1021 cttgagcagc acgagactgg gcggctgggt tgcaagaacc gcgcggacgt cctcgaccgt
     1081 cggggcggca acgacctttc ccggcatgcc aacgcccgtc gcccggctgg cggaggcacc
     1141 tgtggcgatt acaaggtcag cggtctcggc ggcctgccgc aacacgcggc ggtatttccg
     1201 gccctggtcg tggccgacat cggacatgtc acccaagacg aggatgcgcc gggccgggcc
     1261 ccaattggcc atgtccgcga cgatcaggcc cgtgctccac agggccgcct tgtaggtgtc
     1321 gacgaaatag gtgtgctggt cgcggccggt aacgatcccc tgccggttgc ggatgggagc
     1381 gaggcgctcc agctcggcca cggcgcgatc gaggtcgtgg ccgatcgcat ggacgaccga
     1441 gagcgcggca agcacgttgg tcagcatcag cgtgccgaca aatccggtct gcactctcca
     1501 ccgccggtcg ccgacaatca gatcgaaccg catgcaagcg ggccactcgc cgtgga
//
LOCUS       DATAZA010000567        10405 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2077868, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000567 DATAZA010000000
VERSION     DATAZA010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 10405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10405
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2077868"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..645
                     /locus_tag="VHZ56_13995"
     CDS             <1..645
                     /locus_tag="VHZ56_13995"
                     /inference="COORDINATES: protein motif:HMM:NF012402.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin reductase"
                     /protein_id="HEX4299127.1"
                     /translation="IADVTHNVRRYTLERPEGYSFQPGQATDVSLDEEGWRDKKHPFT
                     FTALPDAPTLEFTIKSYFDTGGDGVTERLHGYRPGQSLVIRDVWGTITYKGPGTFIAG
                     GAGVTPFIAILRDLHHNRKMAGHTLIVSNRTEADIILREEFEAMRGLDVLWTVTNEPG
                     SKLLHERIDAAFLKRHVKDWAQNFYLCGPDDMVKQLRGTLKELGASVDNVTWEK"
     gene            complement(662..940)
                     /locus_tag="VHZ56_14000"
     CDS             complement(662..940)
                     /locus_tag="VHZ56_14000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018407264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4242 domain-containing protein"
                     /protein_id="HEX4299128.1"
                     /translation="MLRKFIIEREVPKVGSFDHTQMMGVAKTSNAALEQLGPKIQWVE
                     SYVTDNKTFCVYLAENEELLREHSRLSGFPANIVTEVRTMIDPQTERA"
     gene            1109..2095
                     /locus_tag="VHZ56_14005"
     CDS             1109..2095
                     /locus_tag="VHZ56_14005"
                     /inference="COORDINATES: protein motif:HMM:NF024260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX4299129.1"
                     /translation="MDVLSEVLRAVRLTGAVFFDVSPTAPWAIATPAMRDIRDRVMPE
                     ASHVIAFHVMLAGSCWVETVHPSLGPFLVEAGDVILLPRGDPHVMGSAPGTGVAPDMT
                     LYYRPVDRTLPFAFTKFGGGGTPARFVCGYLGCDATPFNPLLDALPRLTVVRTRDDQG
                     RLISDLIAAALSETGRDRPGTETVLAKLSEVLLVQALRTHLDQLPADASGWLGGLRDP
                     HVGRALQLIHGLPAQDWTLPGLAREVGLSRSALAERFTRLVRETPMHYLGRWRMQLAS
                     HALEQPEQTIAAIAEDVGYQSEAAFNRAFKKYVGAPPGAWRRARAAERTART"
     gene            2120..2323
                     /locus_tag="VHZ56_14010"
     CDS             2120..2323
                     /locus_tag="VHZ56_14010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299130.1"
                     /translation="MPAGPGLSETLRAVLWGNLAIHGIGFVGDCWSAGAGDVPWSGIA
                     VGLVAHLIVLLGAAYYLWRPSAP"
     gene            2446..3069
                     /gene="rimP"
                     /locus_tag="VHZ56_14015"
     CDS             2446..3069
                     /gene="rimP"
                     /locus_tag="VHZ56_14015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEX4299131.1"
                     /translation="MAFDLNEKRYVRESGLETRIARIVEPVANDLGYALVRVKVTQEN
                     GCTLQIMAEDAHGRFAITDCERLSKDLSPVLDVEDPIDREYHLEVSSPGIDRPLVRSR
                     DYQAYIGHEAKVELADALDGRKRFRGEIAAATDDTVTIRLPDVPKGDDPNVVLPLAAV
                     GEAKLVMTDRLLNMAAVDQDENPIDAADDVETIELNSTDAELSEEID"
     gene            3071..4669
                     /gene="nusA"
                     /locus_tag="VHZ56_14020"
     CDS             3071..4669
                     /gene="nusA"
                     /locus_tag="VHZ56_14020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008872230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HEX4299132.1"
                     /translation="MAVSANRLELLQIADAVAREKSIDRMIVIASMQDAIEKAAKTRY
                     GAETEIRAEINPKTGELKLTRLREVVEAVEEPAKHISLVDALQKNAAAKLGDFVGEPL
                     PPIEFGRIAAQSAKQVIVQKVRDAERERMYDEYINRVGEIVNGTVKRVEYGNVIVDLG
                     RGEAIIRRDELIPREMYRYGDRVRAYIYDVRREQRGPQIFLSRTHPQFMAKLFMQEVP
                     EIYDGIITIRSIARDPGSRAKIAVTSNDSSIDPVGACVGMRGSRVQAVVGELQGEKID
                     IIPWTDNIADLVVSALQPADVAKVVLDEQAEKIEVVVPDEQLSLAIGRRGQNVRLASQ
                     LIGWDIDILTEQEESERRQKEFTERSALFMQALDVDETLAQLLASEGFSSVEQLAYID
                     VGEIVSIQGFDDETAAEIQQRAVDYLTAIEKANDEERQALGVADELYEIPGLNAAMLV
                     ALGKEGIKTIEDFAGNAADDLVGWTERKDGETKRFDGTFKDFPVSREEAEEMVLQARL
                     KAGWITEADLAPLAEAPLEEGAPA"
     gene            4689..5306
                     /locus_tag="VHZ56_14025"
     CDS             4689..5306
                     /locus_tag="VHZ56_14025"
                     /inference="COORDINATES: protein motif:HMM:NF006622.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEX4299133.1"
                     /translation="MPGKDEIERRCALTHEVKPAADLIRFVVGPDDVLVPDTDARAEG
                     RGVWISVGETFVAEAVRKKAFAKSLKTAVTVPDDLPALTRLRLEQRFVSSLQMAKKAG
                     QLLTGMTRVKAALESGTALALLTATDAAGDGRKKLLATLTAATRSAEEQGLGGPEVRH
                     FELLDSAQLGLALGIENVIHAAPTQGPAGEAAVKRAEKLARYVAN"
     gene            5330..8053
                     /gene="infB"
                     /locus_tag="VHZ56_14030"
     CDS             5330..8053
                     /gene="infB"
                     /locus_tag="VHZ56_14030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002965227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEX4299134.1"
                     /translation="MADSDDKQQDGTPKKTLTLKPGPAGARPGMSRGPRTVVVEKRTR
                     IVPRGSTGAPAAHAPAAAPSSPRSSSPLQARSDSTRPSSGRTSAPVPRQAGLSATESD
                     ARARVLREAGARQVEDNRRAQEAEARRTEEDARRREIRDAAAREDAARAARAAEAQAT
                     TIEAERPAPATDERAPVRRPGGVETRRPGAPDARRPAGVDARRPAGDTRRPAGDFRRP
                     GGPAPIPNVPPPAPSEADGRRTRTVPPAGGRPMETEADARRGPARAGATPERPARRAD
                     ADAFARSRLTVVNAGTESDRDRGPSLAAMRRRRDKKMGRNQQAAPKLAREVTIPEAIT
                     VQELANRMAERSVVVIKMLMGMDKMVTINDILDADTAELIATELGHTVRRVSDADVET
                     GLYDVASDDKAEDLTSRAPVVTIMGHVDHGKTSLLDAIRQTNVVAGEAGGITQHIGAY
                     QVDWNGQKITFLDTPGHEAFTAMRARGAQATDIAVLVVAADDGVMPQTIESIRHAKAA
                     GVPIIVAINKMDKPSANPLRVRTELLQYDVQVESMGGDTLDVEVSAVKKTGLDKLLQT
                     ILLQAEVLELQVPRDGRAEGLVIEAKLDRGRGAVATVLVQRGTLRVGDIVVAGTEFAR
                     VRALIDDKAEQVKDAGPSTPVEVLGFTGVPSAGDRFSVVESEARAREVTDYRQRQLRE
                     KTAGGGATSLEQMMNQLKQAGISKFPLIIKGDVQGSVEAIVSSLNKLSTEEVSAQILM
                     SAVGGITESDVTLATASHAIIIGFNVRANKQAQDLATRDGIEIRYYNIIYDLVDDVKA
                     AMSGLLKPERRETFIGYAEILEVFNISKVGKVAGCRVTEGIVERGAGVRLLRDNVVVH
                     EGKLKTLKRFKDEVKDVPMGQECGMAFENYEDIRAGDVIECFRVEQVTRTL"
     gene            8193..9113
                     /locus_tag="VHZ56_14035"
     CDS             8193..9113
                     /locus_tag="VHZ56_14035"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEX4299135.1"
                     /translation="MRHFGIGAALLLAGLTATPALATDWTGFYMGFYGGASIRNNDNL
                     KGTFVLGTLNEDGGTERPSSFDNVGGIDPAIFSLLNEGVDLFEYVDGGTGIGYTGGLP
                     VGYAPGSTIGAVAGYRLGNGLRVEVDLSSSTFSADGIGLTDGIRQDVSGAPGDTWVWT
                     LQSQSSATTIPLGDLDPGAALGITSSARFLLANAWYDFDNKSAFTPYIGGGLGVAEVT
                     TDLEDGGLPLQSNNGFTPAAQLGTGLRIDLNDDSVLDFGYRLKVAASGGGSVSAVQQI
                     SNLDFIGYSLSSGGPLVMQTLQAGLTFHMH"
     gene            9155..9709
                     /locus_tag="VHZ56_14040"
     CDS             9155..9709
                     /locus_tag="VHZ56_14040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299136.1"
                     /translation="MPDEPLRTTTFTLTTADALAYEQAGSRITPLGVLSLLCWLGLWG
                     TAALLIPADWAGPRLGWSFSILVSILVAIAYVLALLLIAVRQWLRARRRIRRPVELTL
                     AEWPDRLDIISVGMPRVLLLSAVRRSILTRTHLLLDADEDVLILPRRAFPEEGTVEAL
                     AARIAAPGATGAAAPLVDPTPPNA"
     gene            9719..10135
                     /gene="rbfA"
                     /locus_tag="VHZ56_14045"
     CDS             9719..10135
                     /gene="rbfA"
                     /locus_tag="VHZ56_14045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEX4299137.1"
                     /translation="MPQHHRPAGPTQRMLRVGELVRHALAALFARGEIEDVALGGATI
                     TVPEVRMSPDLKLASAYIMPLGGERAAEIAAALNRHQRFVRGRIAPEVDLKFAPEIRF
                     FVDETFAEFGKIDALLRSDRVQRDLHPGDDEDKDSD"
     gene            10147..>10405
                     /locus_tag="VHZ56_14050"
     CDS             10147..>10405
                     /locus_tag="VHZ56_14050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299138.1"
                     /translation="MTGNVKLDEPIGLAMRGIIFSETGRKAMLAAVANGRPALEAVDP
                     MLAVALGSNYSKENEATIQAGYLVTMRMRELGFEKSRQVPLG"
BASE COUNT         1747 a         3758 c         3344 g         1556 t
ORIGIN      
        1 atcgccgacg tgacccacaa cgtccgccgc tacaccctcg agcggccgga gggctacagc
       61 ttccagccgg ggcaggcgac cgatgtttcg ctcgacgagg agggctggcg cgacaagaag
      121 caccccttca ccttcaccgc gctgcccgac gcgccgaccc tcgaattcac catcaaatcc
      181 tacttcgaca ccggcggcga cggcgtcacc gagcgcctcc acggctaccg gccgggccag
      241 agcctcgtca tccgcgacgt ctggggcacc atcacctaca agggcccggg caccttcatc
      301 gccggcggcg ccggggtcac gccgttcatc gccatcctcc gcgacctcca ccacaaccgg
      361 aagatggcgg gccacacgct gatcgtctcc aaccgcaccg aggccgacat catcctgcgc
      421 gaggaattcg aggcgatgcg cggcctcgac gtgctctgga ccgtgacgaa cgagcccggc
      481 agcaagctgc tgcacgagcg catcgacgcc gcgttcctca agcgccacgt caaggactgg
      541 gcgcagaact tctacctctg cggccccgac gacatggtca agcagctgcg cggcaccctc
      601 aaggagctcg gcgccagcgt tgacaacgtc acctgggaga aataggcgct gcgcccggcc
      661 gtcacgcccg ctcggtctgc gggtcgatca tggtgcgcac ttcggtgacg atgttggccg
      721 gaaagcccga aagccgcgaa tgctcgcgca gcagctcctc gttctcggcc agatagacgc
      781 agaacgtctt gttgtcggtg acgtaggatt ccacccactg gatcttcggc ccgagctgct
      841 cgagcgcggc gttcgacgtc ttcgccacgc ccatcatctg ggtgtggtcg aaactgccca
      901 ccttgggcac ctcgcgttcg atgatgaatt tcctcaacat gtaatttcct cccggatcag
      961 gcaggacgcc cacccgcaca attgaagtta tccgggcccg gcactatgct tgtccggcct
     1021 gttttacttg cagatcgtcc gtattccgaa gattccgaag gaacgcgacc ggctcccggc
     1081 caggcgttgc tcaaccccgg atgtgtcgat ggatgtgctg tcggaggtcc tgcgcgccgt
     1141 tcgcctcacc ggcgcggtgt ttttcgacgt ttcgccgacc gcgccatggg ccattgccac
     1201 ccccgcgatg cgcgacatcc gcgacagggt catgcccgaa gcgagccacg tcattgcctt
     1261 ccacgtcatg ctcgcgggca gctgctgggt ggaaaccgtg caccccagtc tcgggccgtt
     1321 cctggtcgaa gccggcgacg tcatcctgct gccgcgcggc gacccgcacg tcatgggatc
     1381 ggcccccggc accggcgtgg cgcccgacat gaccctctac taccgccccg tcgaccgcac
     1441 gctgccgttc gccttcacca agttcggcgg cggcggcacg ccggcccgct tcgtgtgcgg
     1501 ctatctcggc tgcgatgcga ctcccttcaa cccgctgctc gacgccctgc cgcgcctcac
     1561 tgtcgtgcgg acgcgggacg atcaggggcg gctgatcagc gacctcatcg ccgccgcgct
     1621 gtcggagacg gggcgcgacc ggccgggcac cgaaaccgtg ctcgccaagc tcagcgaggt
     1681 gctgctggtg caggcgctgc ggacccatct cgaccagctg ccggcagacg cctcgggctg
     1741 gctcggcggc ctgcgcgacc cgcatgtcgg ccgcgccctg cagctcatcc acggccttcc
     1801 ggcgcaggac tggacgctgc ccggccttgc ccgcgaggtg ggactgtcgc gttcggcact
     1861 ggccgagcgc ttcacccggc tggtccgcga aacgccgatg cactatctcg gccgctggcg
     1921 catgcagctc gcctcccacg cgctcgagca gccggaacag acgatcgcgg ccattgccga
     1981 agatgtcggc taccagtccg aggccgcgtt caaccgggcg ttcaagaaat atgtcggggc
     2041 gccaccgggt gcctggcgcc gcgcgcgggc ggcggaacgg acggcgcgaa cctgaggatg
     2101 ccggcgatcg agcccttggt tgccggccgg cccgggcctg tcggaaaccc tgcgggccgt
     2161 gctgtggggc aatctcgcca tccacggcat cggctttgtc ggtgattgct ggtcggccgg
     2221 cgccggcgac gtgccctggt ccggcattgc cgtcggcctt gtcgcgcatc tgatcgtgct
     2281 gctcggcgcc gcctactacc tctggcgtcc gagtgcgccc tagcggctct tgcgcgctgc
     2341 cccgcgcggc gctatatggg aacgacattg ttgctctcat tcgagagtgg gtgccctgac
     2401 cggcccccgc tctttttgct ttcacaaggg tccgcagacc gcatcttggc tttcgacctc
     2461 aacgagaaac gctacgtccg ggagtccggc ctcgagacgc gcatcgcgcg catcgtcgag
     2521 ccggtcgcca acgatctggg ctatgcgctg gtccgcgtga aggtcacgca ggagaacggc
     2581 tgcacgctgc agatcatggc cgaggatgcg cacggccgct tcgccatcac cgactgcgag
     2641 cggctgagca aggacctgtc gccggtgctc gatgtcgagg acccgatcga ccgcgagtac
     2701 cacctcgagg tcagctcgcc cggcatcgac cggccgctgg tgcggtcgcg cgactaccag
     2761 gcctatatcg gccacgaggc caaggtcgag ctggccgatg ccctcgacgg ccgcaagcgc
     2821 ttccgcggcg aaatcgccgc cgcgaccgac gacaccgtca ccatccgcct gcccgacgtg
     2881 cccaagggcg acgaccccaa tgtcgtgctg ccgctggccg ccgtcggcga agccaagctg
     2941 gtgatgaccg accggctgct gaacatggcg gccgtcgacc aggacgagaa ccccatcgac
     3001 gccgccgacg acgtcgagac catagaactg aattctaccg acgctgaact ctccgaggag
     3061 atcgactgaa atggccgtta gcgcaaaccg actcgagctg ctgcagatcg cggacgccgt
     3121 ggcgcgggaa aaatccatcg accggatgat cgtcatcgcc tccatgcagg acgccatcga
     3181 gaaggcggcc aagacccgct acggcgccga gaccgagatc cgcgccgaga tcaaccccaa
     3241 gaccggcgag ctcaagctca cccgcctgcg cgaggtggtc gaggcggtgg aggagccggc
     3301 caagcacatt tcgctcgttg acgcgctgca gaagaatgcg gccgccaagc tcggcgattt
     3361 cgtcggcgag ccgctgccgc ccatcgagtt cggccgcatc gccgcgcagt cggccaagca
     3421 ggtgatcgtc cagaaggtcc gcgatgccga gcgcgagcgc atgtacgacg agtacatcaa
     3481 tcgcgtcggc gagatcgtca acggcaccgt caagcgcgtc gagtacggca acgtcatcgt
     3541 cgatctcggc cgcggcgagg cgatcatccg ccgcgacgag ctgatcccgc gcgagatgta
     3601 ccgctacggc gaccgcgtcc gcgcctacat ctacgacgtc cgccgcgagc agcgcggccc
     3661 gcagattttc ctgtcgcgca cgcacccgca gttcatggcc aagctgttca tgcaggaggt
     3721 gccggaaatc tacgacggca tcatcaccat ccgctcgatc gcccgcgacc cgggcagccg
     3781 cgccaagatc gccgtgacca gcaatgacag ctcgatcgat ccggtcggcg cctgcgtcgg
     3841 catgcgcggc tcgcgcgtcc aggcagtggt cggcgaactg cagggcgaaa agatcgacat
     3901 catcccctgg accgacaaca tcgccgacct cgtggtctcg gcgctgcagc ccgccgacgt
     3961 cgccaaggtc gtgctcgacg agcaggctga aaagatcgag gtcgtggtcc ccgacgagca
     4021 gctgtcgctc gccatcggcc gccgcggcca gaacgtgcgg ctcgcctccc agctgatcgg
     4081 ctgggacatc gacatcctga ccgaacagga agagtcggag cgccggcaga aggaattcac
     4141 cgaacggtcg gctttgttca tgcaggccct tgatgtcgac gagacgcttg cccagctatt
     4201 ggcctcggaa ggattctcct cggtcgagca gcttgcctat atcgatgtcg gcgagatcgt
     4261 ctcgatccag ggcttcgacg atgaaaccgc ggccgagatc cagcagcgcg ccgtcgacta
     4321 cctgacggcc atcgagaagg ccaacgacga ggagcgccag gcgctcggcg tcgccgacga
     4381 actctacgag atcccggggc tcaacgccgc catgctggtg gcgctcggca aggaaggcat
     4441 caagaccatc gaggattttg ccggcaatgc cgccgacgac ctcgtcggct ggactgaacg
     4501 caaggacggc gagaccaagc gtttcgacgg caccttcaag gatttcccgg tgtcgcgcga
     4561 ggaagccgaa gaaatggtcc tgcaggcccg cctgaaggcc ggctggatca ccgaagccga
     4621 cctcgccccg ctggccgagg cgccgctcga ggaaggagcg cccgcgtaat gcgggcgatc
     4681 gccacccggt gcccggcaag gacgagatcg aacggcgttg cgcgctcacc catgaggtga
     4741 agccggcggc ggacctcatc cgcttcgtgg tgggccccga cgacgtgctg gtgcccgaca
     4801 ccgatgcccg ggccgagggt cgcggcgtgt ggatcagcgt cggcgagaca ttcgtcgccg
     4861 aggcggtgcg gaagaaggct tttgccaaga gcctcaagac cgccgtcacc gtgccggacg
     4921 acctgccggc actgacccgc ctgcggctcg agcagcgctt cgtttcgagc ctgcagatgg
     4981 ccaagaaagc cggccagctg ctgaccggca tgacgcgggt caaggcggcg ctggagagcg
     5041 gtacggcact ggctctgctg accgccacgg acgccgccgg cgacggtcgg aaaaagctcc
     5101 tcgcgaccct cacggccgcg accagaagtg ccgaggaaca ggggcttggc gggcctgaag
     5161 tgcggcattt tgaattgctc gattccgcgc aattgggttt ggcgctcggg attgaaaatg
     5221 tgatacatgc tgcgccgacc caagggccag caggtgaagc agcggtgaaa cgggccgaga
     5281 aattggcacg ttacgtcgcc aactgacctt tgtaaggaaa cgagttttta tggctgacag
     5341 cgacgacaag cagcaagacg gcacacccaa gaagaccctg accctgaagc cgggtccggc
     5401 gggtgctcgt ccaggcatgt cccgcggacc gcgcaccgtc gtggtcgaaa agcgcacccg
     5461 catcgtgccg cgcggcagca ccggcgcacc cgccgcgcat gcgcccgccg cggcgccgtc
     5521 gagcccgcgt tcgtcctcgc cgctgcaggc gcggtccgac tccacccgtc cgtcatccgg
     5581 ccgcacctcg gcgccggtgc cgcgccaggc cggcctcagc gccaccgaat ccgatgcccg
     5641 tgcccgcgtg ctgcgcgaag ccggcgcccg ccaggtcgaa gacaaccgcc gggcccagga
     5701 agccgaggcg cgccggaccg aggaagacgc ccgccgccgc gaaatccgcg acgccgccgc
     5761 ccgcgaggac gcagcccggg ccgcccgcgc cgccgaggcg caggccacca ccatcgaagc
     5821 cgagcgtccg gcccccgcca ccgatgagcg cgcccctgtg cgccgccccg gcggcgtcga
     5881 gacccgccgc cccggtgcgc ccgacgcgcg ccgtccggcc ggcgtcgatg cccgccgtcc
     5941 ggccggcgac acgcgtcgcc cggctggcga ttttcgccgc cccggcggcc ccgcgccgat
     6001 ccccaatgtc ccgccgccgg cgccgtccga ggccgatggc cgccgtaccc gcaccgtgcc
     6061 gcccgccggc ggccggccga tggaaaccga ggccgacgcc cgtcgcggtc ccgcccgcgc
     6121 tggcgcgacg cccgagcgtc cggcccgccg cgccgacgcc gatgccttcg cccgcagccg
     6181 cctcaccgtc gtcaatgccg gcaccgaatc cgaccgcgac cgcggtccct cgctcgccgc
     6241 catgcgccgc cgccgcgaca agaagatggg ccgcaaccag caggccgcgc ccaagctcgc
     6301 ccgcgaggtg accatccccg aggccatcac cgtccaggag ctcgccaacc gcatggccga
     6361 gcgctccgtc gtcgtcatca agatgctgat gggcatggac aagatggtga ccatcaacga
     6421 catcctcgac gccgataccg cggagctgat cgccaccgag ctcggccaca ccgtcaggcg
     6481 cgtctccgac gccgacgtcg agacgggcct ctacgacgtg gcctccgacg acaaggccga
     6541 ggatctcacc agccgcgctc cggtggtcac catcatgggc cacgtcgacc acggcaagac
     6601 cagcctgctc gacgccatcc gccagaccaa cgtcgtggcg ggcgaggccg gcggcatcac
     6661 ccagcacatc ggcgcctacc aggtcgactg gaacggccag aagatcacct tcctcgacac
     6721 ccccggccac gaggcattca ccgcgatgcg ggcccgcggc gcgcaggcga ccgacatcgc
     6781 cgtgctggtg gtggcggccg acgacggcgt catgccgcag accatcgagt cgatccgcca
     6841 cgccaaggcc gccggggtgc cgatcatcgt cgccatcaac aagatggaca agccgtcggc
     6901 caatccgctg cgcgtccgca ccgagctgct gcaatacgac gtgcaggtcg aatcgatggg
     6961 tggcgacacc ctcgatgtcg aggtctcggc ggtcaagaag accggcctcg acaagctgct
     7021 gcagaccatc ctgctgcagg ccgaggtgct cgagctgcag gtgccgcgcg acggccgcgc
     7081 cgagggtctg gtcatcgagg ccaagctcga tcgcggccgc ggcgccgtgg ccaccgtgct
     7141 ggtacagcgc ggtacgctgc gcgtcggcga catcgtcgtc gctggaacgg agttcgcccg
     7201 cgtccgggcg ctgatcgacg acaaggccga gcaggtcaag gacgccggtc cctcgacgcc
     7261 cgtcgaggtg ctcggcttta ccggcgtgcc gtcggccggc gaccgcttca gcgtcgtcga
     7321 gagcgaggcc cgggcccgcg aggtcaccga ctatcgccag cgccagctgc gcgaaaagac
     7381 cgccggtggc ggtgccacca gcctcgagca gatgatgaac cagctcaagc aggccggcat
     7441 cagcaagttc ccgctgatca tcaagggcga cgtgcagggc tcggtcgagg cgatcgtctc
     7501 ctcgctcaac aagctgtcga ccgaagaggt ctcggcgcag atcctgatgt cggcggtcgg
     7561 cggcatcacc gagagcgacg tgacgctggc caccgcctcg cacgccatca tcatcggctt
     7621 caacgtccgc gccaacaagc aggcgcagga cctggcgacc cgcgacggca tcgagatccg
     7681 ctactacaac atcatctacg acctcgtcga tgacgtgaag gcggcgatgt cgggcctgct
     7741 gaagcccgag cgccgcgaga ccttcatcgg ctacgccgag atcctcgagg tgttcaacat
     7801 cagcaaggtc ggcaaggtcg ccggctgccg tgtcaccgag ggcatcgtcg agcgcggcgc
     7861 cggcgtgcgc ctgttgcgcg acaacgtcgt ggtgcacgag ggcaagctca agacgctcaa
     7921 gcgcttcaag gacgaggtca aggacgtccc catgggccag gaatgcggca tggccttcga
     7981 gaattacgag gacatccgcg ccggcgacgt catcgagtgc ttccgcgtcg agcaggtcac
     8041 ccgcacgctc tagggcgagc ctcggcgatc gaaaccaggg gcgcctttcg gggcgccctt
     8101 ttcattcgtg caatttgccg attgtggccg ttgcgcaaca gccggttcgc cgccgatcgt
     8161 gcataaagtc tctgggttcg ggggaatcga aagtgcgtca tttcgggatt ggagcggccc
     8221 tgctgctcgc gggactgacc gccacgccag cgctggccac cgactggacc ggcttctaca
     8281 tgggctttta cggcggcgcc tccatccgca acaatgacaa cctcaagggc accttcgtgc
     8341 tgggcaccct caacgaggac ggcggcaccg agcggcccag cagcttcgac aatgtcggcg
     8401 gcatcgaccc ggcgattttc tcgctgctca acgagggcgt cgacctgttc gaatacgtcg
     8461 atggcggcac cggcatcggc tacaccggcg gcctgccggt cggctatgcg cccggctcga
     8521 ccatcggcgc agtggccggc taccggctcg gcaacggcct gcgggtcgaa gtcgatctgt
     8581 cgagctcgac cttctcggcc gacggcatcg gcctgaccga cggcattcgc caggacgtca
     8641 gcggcgcgcc gggcgacacc tgggtgtgga cgctgcagtc ccaatcgtcg gccaccacca
     8701 tcccgctcgg cgatctcgac cccggcgcgg cgctcggcat caccagctcg gcccgcttcc
     8761 tgctggccaa cgcctggtac gatttcgaca acaagagcgc cttcacgccc tatatcggcg
     8821 gcggcctcgg cgttgccgaa gtcaccaccg atctcgaaga cggcggcctg ccgctgcaat
     8881 cgaacaatgg cttcaccccg gccgcgcagc tcggcaccgg cctccgcatc gacctcaacg
     8941 acgattccgt gctcgacttc ggctatcggc tgaaggtcgc ggcctccggc ggcggcagcg
     9001 tttcggcggt gcagcagatc agcaacctgg atttcatcgg ctacagcctc tccagcggcg
     9061 gcccgctggt gatgcagacg ctgcaggccg gcctcacctt ccacatgcat tgatcgcggt
     9121 tctggagctc gccggcatgc gctagattgc gcgcatgccc gacgagccgc tgcgcaccac
     9181 caccttcacc ctgaccaccg ccgacgcgct cgcctatgag caggcgggga gccgcatcac
     9241 gccgctcggc gtgctctcgc tgctctgctg gctcgggctc tggggcaccg ccgcgctgct
     9301 cattcccgcc gactgggccg ggccgcgact cggctggagc ttttcgatcc tggtctcgat
     9361 cctggtcgcc atcgcctacg tgctggcctt gctcctcatc gccgtccggc agtggctgcg
     9421 cgcccgccgc cgcatccgcc gtccggtcga gctgacgctc gccgagtggc ccgaccggct
     9481 cgacatcatc agcgtcggca tgccgcgcgt cctgctgctg tccgccgtgc gtcgctccat
     9541 cctgacgcgc acccacctgc tgctcgatgc cgacgaggac gtgctcatcc tgccccgccg
     9601 cgcctttccc gaagaaggca ccgtcgaggc gctggccgct cgcatcgccg ctcccggcgc
     9661 cactggggcg gcagcgccgc tggttgaccc gacgccgccg aacgcctaag tgcggccgat
     9721 gccccagcac caccgccccg ccggcccgac ccagcgcatg ctgcgcgtcg gcgaactcgt
     9781 gcgccacgca ctggcggcgc tgttcgcccg tggcgagatc gaggacgtcg cgctcggcgg
     9841 cgccaccatc acggtgccgg aggtgcgcat gtcgcccgac ctcaagctgg ccagcgccta
     9901 catcatgccg ctcggcggcg agcgcgcggc cgagatcgcc gccgcgctca accgccacca
     9961 gcgcttcgtg cgcggccgca tcgccccgga ggtcgacctc aaattcgccc cggagatccg
    10021 cttcttcgtc gacgaaacct tcgccgaatt cggcaagatc gacgccctgc tgcgctccga
    10081 ccgggtgcag cgcgacctgc atccgggcga cgacgaggac aaggattccg actagggaga
    10141 agcgcgttga ctggcaacgt aaagctcgac gagccgatcg gtctcgccat gcgtggcatc
    10201 attttctcgg agaccggtcg aaaagccatg ctggcagctg tcgccaacgg acgaccagcg
    10261 ttggaggcag ttgatcctat gttggccgtt gcgttgggtt ccaactactc caaagagaat
    10321 gaggccacga tccaagctgg ctatcttgtc accatgcgaa tgcgagagct cggcttcgaa
    10381 aagagtcgac aagttccgct cggca
//
LOCUS       DATAZA010000568         2211 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2429060, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000568 DATAZA010000000
VERSION     DATAZA010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2211
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2429060"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..272)
                     /locus_tag="VHZ56_14055"
     CDS             complement(<1..272)
                     /locus_tag="VHZ56_14055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299139.1"
                     /translation="MDDHMRTMPRQFQRRCQPDAIARPGDERNPAALVRDIRHAPFGH
                     CVEPSRRIAIPDRLVVTARRYRQATSAAIQFLLLSTSAPALIHGIMP"
     gene            156..1058
                     /locus_tag="VHZ56_14060"
     CDS             156..1058
                     /locus_tag="VHZ56_14060"
                     /inference="COORDINATES: protein motif:HMM:NF004846.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HEX4299140.1"
                     /translation="MADITDQRGRVALVTGASNGIGLATALELARHGAHVIVHARDPG
                     RGGAALERIQGEVPDARLELQLADFADLKAVAEMAERMRVTHAGLDLIINNAGTMMAP
                     PRPTAQHHELHFGVNYLAHFALTLPLLPLLAGRPDARVVNVSSIAHRHGRMDFDNLPG
                     AGRWPYQLYARSKLAMTYFGVELDRRLRATGSPILSVLAHPGFAGTNLAEGMAPGVTG
                     WWMRYIFPRFGQSLVDGARPTLFAATQPGVTSGEFYGPDGLGELKGAPRRVKISARAM
                     DGQVGKRLWVESERLTGVTMPAIG"
     gene            complement(1055..1687)
                     /locus_tag="VHZ56_14065"
     CDS             complement(1055..1687)
                     /locus_tag="VHZ56_14065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010684724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HEX4299141.1"
                     /translation="MLSLASLLAFTGVAVAMVMTPGPNMAYLVSRSIAQGPAAGLVSL
                     VGVATGLVSYMLLAAFGITAVLLAVPLAYDAIRFAGAAYLAWMAWNAFRPGGRSPFQV
                     RRLSVDSPRKLYLMGLLTSLLNPKIAALYLSLLPQFIDKTHGSILAQTLELGAVQIVC
                     SVVGNSIWIVTAGSVTRFLTRRPFWAKAQRWLMGTVLGLLALRMATDAGR"
     gene            complement(1810..1983)
                     /locus_tag="VHZ56_14070"
     CDS             complement(1810..1983)
                     /locus_tag="VHZ56_14070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015342520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1127 domain-containing protein"
                     /protein_id="HEX4299142.1"
                     /translation="MNLFSSLFRRSEKRRTYAELMQLDDHLLRDIGLNRSDLHRMMAG
                     QRTPHGRIPRSHE"
BASE COUNT          379 a          667 c          843 g          322 t
ORIGIN      
        1 ggcatgatgc cgtggatcaa ggccggcgcg ctggtcgaca agagcaagaa ctgaatggcg
       61 gccgacgtgg cctgccgata gcggcgggcc gtaacaacga ggcggtcggg gatcgcgatc
      121 cgccgggagg gttcaacgca atgtccaaat ggagcgtggc ggatatcacg gaccagcgcg
      181 gccgggttgc gctcgtcacc ggggcgagca atggcatcgg gctggcaacg gcgctggaac
      241 tggcgaggca tggtgcgcat gtgatcgtcc acgcgcgcga tccgggccgg ggcggggcgg
      301 cgctagagcg tatccagggc gaagtgccgg acgccaggct cgagctgcag ctggctgatt
      361 tcgccgatct caaggcagtg gcggagatgg ccgaacgcat gagggtgacc catgccgggc
      421 tcgatctgat catcaacaat gccgggacga tgatggcgcc gccgcgaccc acggcgcagc
      481 accacgagct gcatttcggg gtcaattatc tcgcgcattt cgcgctgacg ctgccgctgt
      541 tgcccctgct cgcgggccgc ccggatgcgc gggtggtcaa cgtttcctcg atcgcccacc
      601 ggcacgggcg gatggatttc gacaatctgc ccggggcagg gcgctggcct taccaactct
      661 acgcgcgttc gaagctggcg atgacatatt tcggggtcga gctggaccgg cggctgcggg
      721 ccacaggcag cccgatcctg agcgtgctgg cgcatccagg atttgccggc accaacctcg
      781 ccgagggcat ggcgccgggg gtgacgggat ggtggatgcg ctacatcttc ccgcgtttcg
      841 gccagagcct agtcgacggt gcgcgaccga cgctgtttgc ggcgacgcag ccgggcgtaa
      901 cttcgggcga gttctacggc cccgatgggc tcggcgagct caagggggcg ccgaggcggg
      961 tcaagatctc cgcgcgggca atggacgggc aggtcggcaa gcggctgtgg gtcgagtcgg
     1021 aacggctgac cggtgtgacc atgccggcga tcggctagcg gccggcgtcg gtcgccatgc
     1081 gcagcgccag caggccgagg acggtgccca tcagccagcg ctgcgccttc gcccagaacg
     1141 gccggcgggt caggaaccgc gttacggaac ctgccgtgac gatccagatg ctgttgccga
     1201 cgacgctgca gacgatctgg acggcgccca gctccagcgt ctgcgccagg atgctgccat
     1261 gggtcttgtc gatgaactgc ggcagcagcg acaggtagag cgcggcgatc ttgggattga
     1321 ggagactggt gagcaggccc atcaaataga gcttgcgcgg cgaatccacg gaaagcctgc
     1381 gcacctggaa cggcgatcgg ccgccggggc ggaaggcatt ccacgccatc caggcgagat
     1441 aggcggcgcc ggcaaagcgg atggcgtcgt aggccagcgg cacggcgagc aggacggcgg
     1501 tgatgccgaa ggcggcgagc agcatgtagc tgacgaggcc ggtagcgaca ccgaccagcg
     1561 acaccagccc ggcggccggc ccctgcgcaa tcgagcgcga gacgaggtag gccatgttcg
     1621 ggccgggcgt catcaccatg gccacggcga cgccggtgaa cgcgagcagg ctggcgagcg
     1681 agagcattgg atggtccccg actgccgcgt tctggcatgg cggcgggggg aacgccagca
     1741 gccgcagatg cgaagggccc cggcgatgcc ggagcccttc agggcctgcc gcgatgggac
     1801 gaggctgcct cactcatgcg agcgcggtat ccggccgtgc ggggtgcgct gcccggccat
     1861 catgcgatgg aggtcggagc ggttgaggcc gatgtcgcgc agcagatgat catcgagctg
     1921 catcagctcg gcgtaggtcc ggcgcttttc cgaacggcgg aaaagcgaag agaacaggtt
     1981 catttcgcgt cgtccttgct gggggatggg acgccttgcg gcgtccgatg gcgcggcata
     2041 tgcgggcaag ggtgtgaacg ggttatgaac ggcgggccgg gcgagagcgt ccgatgaaac
     2101 tgccggattc ttggccgccg ggccggcagc tcctgtcgca cgggaacgtg gtggaagcgg
     2161 ccagcggctg agccggttgc gggccggacg tgcggcccgc agaacaccct g
//
LOCUS       DATAZA010000569         2947 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1613351, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000569 DATAZA010000000
VERSION     DATAZA010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2947
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1613351"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2067)
                     /gene="gyrA"
                     /locus_tag="VHZ56_14075"
     CDS             complement(<1..2067)
                     /gene="gyrA"
                     /locus_tag="VHZ56_14075"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020184633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEX4299143.1"
                     /translation="MAEPSDDTGALPPSSDILPISITDEMRESYLSYAMSVIVSRALP
                     DVRDGMKPVHRRILYSMHQQNFVWNRPYHKSATVVGDVIGKYHPHGNEAVYMSLVRMA
                     QEFSLRVTLVDGQGNFGSIDGDMPAAMRYTEVRMEKITNSLLDDLENDTVDMKDTYDN
                     SNEEPTVLPARFPNLLVNGGSGIAVGMATNIPSHNLGETIDATLAVLDNPDIAITEIM
                     QHMQGPDFPTAGIILGRSGIRQAYETGRGSILIRGRVATEDMRGNREALIVTEIPYQV
                     NKSLMIEKMAELVRDKRIEGISDIRDESDRHGIRVVIELKRDAVPDVVLNQLYRFTPL
                     QSSFGCNFVALNGGKPELMNVRDMLRAFVDFREEVVTRRARFLLNKARDRAHVLVGLA
                     VAVANIDEVIALIRQAPDPGTARERLMERDWPARDVAPLMALVDDPRHKIRDDGTFKL
                     SDDQARAILALTLSRLTALGRDEIGDELNGLGTDIADYLDILRSRERVQQIVRDELNA
                     IKTEFSTPRLTAIDEAAGDFEDEDLIAREDMVVTVTHGGYIKRVPLSAYRAQKRGGKG
                     RSGMSTRDEDFVTRLFVANTHTPVLFFSSAGQVYKLKVWRLPIAEPQGKGRALINMLP
                     LDQGERITSIMPLPENEAEWKKLDIMFATVRGNVRRNSLADFVDINKNGKIAMKLSEG
                     DHLVDVA"
     gene            2415..2945
                     /locus_tag="VHZ56_14080"
     CDS             2415..2945
                     /locus_tag="VHZ56_14080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299144.1"
                     /translation="MKLFGPLAQAVVLAGVIASAGVVPAFAGPAETAALEKYLGTWNG
                     TGTMTGGQTQSVTCKMALSEGNGGKLNYTGRCNLAGAQLSVTGTIAWIDAKHRYEAVM
                     NSGVGGFKGVAVGEREGDSIVFDLKQRANDDQGNDISIAAAVVLSDKSISVDFHAVFN
                     DSGEKIDAKIPFTKAA"
BASE COUNT          468 a          968 c          963 g          548 t
ORIGIN      
        1 cgcgacgtcg accagatggt cgccctcgct cagcttcatg gcgatcttgc cgttcttgtt
       61 gatatcgacg aaatcggcca gcgagttccg ccgcacattg ccgcgcaccg tcgcgaacat
      121 gatgtcgagc ttcttccact cggcctcgtt ctcgggcagc ggcatgatcg aggtgatgcg
      181 ctcgccctgg tcgagcggca gcatgttgat gagcgccctg cccttgccct gcggctcggc
      241 gatcggcagc cgccagacct tgagcttgta gacctgcccc gccgacgaga agaacagcac
      301 cggcgtgtgc gtattggcga cgaacagccg ggtgacgaag tcctcgtcgc gcgtcgacat
      361 gcccgagcgg cccttgccgc cgcgcttctg cgcccggtag gcgctgagcg gcacccgctt
      421 gatgtagccg ccatgggtga cggtcaccac catgtcctcg cgggcgatca ggtcctcgtc
      481 ctcgaagtcg cccgccgcct cgtcgatggc ggtcagtcgc ggtgtcgaga actcggtctt
      541 gatggcgttg agttcgtcgc ggacgatctg ctgcacccgc tcgcgcgagc gcaggatgtc
      601 gagataatcc gcaatgtcgg tgccgagccc gttgagctcg tcgccgatct cgtcacggcc
      661 cagcgccgtc agccggctga gggtcagcgc caggatggcg cgggcctggt cgtcgctgag
      721 cttgaacgtg ccgtcgtcgc ggatcttgtg ccgcgggtcg tcgaccagcg ccatcagcgg
      781 cgccacgtcg cgtgccggcc agtcgcgctc catcagccgc tcgcgcgccg tccccggatc
      841 gggtgcctgc cggatcagcg cgatgacctc gtcgatattg gcgacagcca cggcgagacc
      901 gaccagcaca tgggcccggt cgcgcgcctt gttgagcagg aaccgcgcgc ggcgggtgac
      961 cacctcctcg cggaagtcga cgaacgcccg cagcatgtcg cggacgttca tcagctccgg
     1021 cttgccgccg ttgagcgcca cgaaattgca gccgaacgag ctctgcagcg gcgtgaagcg
     1081 gtagagctgg ttgagcacca cgtcgggaac cgcgtcgcgc ttgagctcga tcaccacccg
     1141 gatgccgtgt cggtcggatt cgtcgcgaat gtcggagatg ccctcgatcc gcttgtcgcg
     1201 caccaactcg gccatcttct cgatcatcag cgacttgttc acctggtacg ggatctcggt
     1261 gacgatcagc gcctcgcggt tgccgcgcat gtcctcggtc gccacgcggc cgcggatcag
     1321 gatcgagccg cgcccggtct cgtaggcctg ccggatgccg gaacggccga ggatgatgcc
     1381 cgcggtcgga aaatccggcc cctgcatgtg ctgcatgatc tcggtgatgg cgatgtcggg
     1441 attatcgagg accgccagcg tcgcgtcgat cgtctcgccg aggttgtggc tcgggatgtt
     1501 ggtggccatg ccaaccgcga tgccgctgcc gccattgacc agcagattgg ggaaccgcgc
     1561 cggcagcacg gtcggctcct cgttcgaatt gtcgtaggtg tccttcatgt ccaccgtgtc
     1621 gttctcgaga tcgtcgagaa gcgagttggt gatcttttcc atgcgcactt cggtgtagcg
     1681 catggccgcc ggcatatcgc cgtcgatcga gccgaaattg ccctgcccgt cgaccagcgt
     1741 cacccgcagc gagaactcct gcgccatgcg cacgagcgac atgtagaccg cctcgttgcc
     1801 gtgcgggtga tacttgccga tgacgtcgcc gaccaccgtc gccgatttgt ggtacggccg
     1861 gttccagacg aagttctgct ggtgcatcga atagaggatg cgccggtgca ccggcttcat
     1921 gccgtcgcgc acgtcgggca gcgcccggct gacgatcacg ctcatggcgt agctgagata
     1981 cgattcccgc atctcgtcgg tgatcgagat cggcaggatg tcggagctgg gcggcagggc
     2041 gccggtgtcg tctgagggtt cggccaaggg tcggttttcg gtccggtttc gctgtcggcg
     2101 ggtctagtcg attccccgcc gaaagcctaa tccggccggg actttgcggg catttgcggg
     2161 cccgtcttcc accgctatcg gatatgggga ggcaatcggc cgttttcgag gccttccccg
     2221 ggcctcggga ttcgtggcaa cgcttgccgg aaaagcgcgc aaacccccac aaatcggccg
     2281 caggcaaggc tctatcgcct tgtttggacc acggtttatg ataacgctcg cgctcgctta
     2341 cggggtgagc tactcatccc gcccaatttg gtcgccgggg ggcgattcgt aatccgcttg
     2401 gaggcgttaa caaaatgaag ctgttcggac cccttgcgca ggcggtcgtt ctcgccggcg
     2461 tgatcgcgtc ggccggagtg gttccggcgt ttgccggccc cgccgagacc gcggcgctcg
     2521 aaaaatatct cggcacctgg aacggcaccg gcaccatgac cggcggccag acccagtctg
     2581 tcacctgcaa gatggcgctg agcgaaggca atggcggcaa gctcaactac accggccgct
     2641 gcaacctcgc cggggcccag ctctcggtca ccggcaccat cgcctggatc gatgccaagc
     2701 atcgctacga ggcggtgatg aactccggcg tcggcggctt caagggcgtc gccgtgggcg
     2761 agcgcgaggg cgacagcatc gtgttcgacc tcaagcagcg cgccaacgac gaccagggca
     2821 acgacatctc gatcgccgcg gcggtcgtgc tgtccgacaa gtcgatctcg gtcgacttcc
     2881 acgccgtgtt caacgacagc ggcgagaaga tcgacgccaa gatcccgttc accaaggccg
     2941 cctgagc
//
LOCUS       DATAZA010000570         1536 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2078087, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000570 DATAZA010000000
VERSION     DATAZA010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2078087"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1315
                     /locus_tag="VHZ56_14085"
     CDS             <1..1315
                     /locus_tag="VHZ56_14085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     ATP-binding protein/permease"
                     /protein_id="HEX4299145.1"
                     /translation="FAAPFNTAWGFYYLCIAFAAVATWMSANVGHSRYGRALIALRDA
                     EVAAEATGISKPKMLMSIFLLAGALAAVAGGLFASLQTYITPDAFTFDLSVLFFIAIL
                     IGGRGSIMGPLLGTVILTILPEIAAPLAAWSTFLYAVLLLVIVLAMPGGIAALLDFRN
                     RRPLPSNRAIVPRPAALADIVRKSAGGRTLSLRAIALSFGNVRAIDGLDLDVQPGRIH
                     GLIGPNGSGKTTTLNVISGYYASKGGTMRLGEDALPPGMPALRAARGIARTFQTPRVI
                     GEASVLENVMIGGTIEGQASFIEAMLSLPRHHRDERMLATKARGLLGVVGLETLADVR
                     ADRLQHSELRFIEIARALMLDPDFLLLDEPAAGLSGDEIDRLAGLIKAISRRGTGVLL
                     VEHHADLIFEICDEITVLNLGKILAAGTAAEIRTHKEVVSAYLGA"
     gene            1296..>1536
                     /locus_tag="VHZ56_14090"
     CDS             1296..>1536
                     /locus_tag="VHZ56_14090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX4299146.1"
                     /translation="MPTSAPEPLLAVAALESGYGKIRVLHGIDFQVAAGEVVALLGPN
                     GAGKSTMLRAMSGLLPVNAGYVRFGGRDITNATPRE"
BASE COUNT          227 a          560 c          491 g          258 t
ORIGIN      
        1 attcgcagcc cccttcaaca ccgcctgggg gttctactat ctgtgcatcg cgtttgccgc
       61 ggtggcgacc tggatgagcg ccaatgtcgg gcattcgcgc tacggccgcg ccctgatcgc
      121 actgcgcgac gccgaggtcg cggccgaagc caccggcatt tccaagccga agatgctgat
      181 gtcgatcttc ctgctggctg gcgcgctggc ggcagtcgcc ggcgggctgt tcgcgagcct
      241 gcaaacctac atcacgcccg acgccttcac cttcgacctc tcggtgctct tcttcatcgc
      301 catcctgatc ggcggccgcg gctcgatcat gggccccctg ctcggcaccg tcatcctcac
      361 catcctgccg gagatcgcag ccccgctggc ggcgtggtcg acattcctct atgcggtgct
      421 gttgctggtc atcgtgctgg cgatgcccgg cggcattgcg gcgctgctcg acttccgcaa
      481 ccgccgcccg ctccccagca accgcgccat cgtgccgcgg ccggccgcgc ttgccgatat
      541 cgtgcgcaag agtgccggcg gcaggacgct cagcctgcgc gcgatcgcgc tgagcttcgg
      601 caatgtccgc gccatcgacg gcctcgacct cgacgttcag cccggacgga ttcacggcct
      661 gatcggtccc aatggcagcg gcaagaccac gacgctcaac gtgatctccg gctattacgc
      721 ctccaagggc ggcaccatgc ggctcggcga ggatgcgctg ccgcccggca tgccggcgct
      781 gcgcgccgcg cgcggcatcg cccgcacctt ccagaccccg cgcgtgatcg gcgaagcctc
      841 ggtgctggag aacgtgatga tcggcggcac catcgaggga caggcgagtt ttatcgaggc
      901 gatgctgtcg ctgccgcgcc atcaccgcga cgaacgcatg ctggccacca aagcgcgcgg
      961 cctgctcggc gtggtcgggc tggagacgct ggccgatgtc cgcgccgacc ggctgcagca
     1021 cagcgagctg cgcttcatcg agatcgcgcg cgcgctgatg ctcgatccgg atttcctgtt
     1081 gctcgacgaa cccgccgccg gcctctcggg cgacgagatc gaccggctgg ccggactgat
     1141 caaggcgatc agccggcgcg gcaccggcgt gctgctggtc gaacaccacg ccgatctgat
     1201 tttcgagatt tgcgacgaga tcaccgtcct caacctcggc aagatcctcg cggccggcac
     1261 cgcggccgag atccgcaccc acaaggaggt ggtcagtgcc tacctcggcg cctgaaccgc
     1321 tgctggccgt tgccgccctt gaatccggct acggcaagat ccgcgtgctg cacggcatcg
     1381 acttccaggt cgcggccggc gaggtcgtgg cattgctcgg cccgaacggc gccggcaaga
     1441 gcaccatgct gcgcgcgatg tcgggactgc tcccggtcaa cgccggctat gtccgcttcg
     1501 gtggccgcga catcaccaac gccacgccgc gcgaga
//
LOCUS       DATAZA010000571         4135 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1153044, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000571 DATAZA010000000
VERSION     DATAZA010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4135
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1153044"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..366
                     /locus_tag="VHZ56_14095"
     CDS             <1..366
                     /locus_tag="VHZ56_14095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018071428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="feruloyl-CoA synthetase"
                     /protein_id="HEX4299147.1"
                     /translation="ARREPNGFYRIVDRLKDMYVSGGENVYPAEIEAVLAAHPDIADA
                     AVLGVPDTRWGETGVAFVTPLGGAAVDAAALAAHCASRLARYKCPARFIVVEAIPRSA
                     AGKILKPLLRARLNQGDAP"
     gene            363..1181
                     /locus_tag="VHZ56_14100"
     CDS             363..1181
                     /locus_tag="VHZ56_14100"
                     /EC_number="4.1.2.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018246052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="p-hydroxycinnamoyl CoA hydratase/lyase"
                     /protein_id="HEX4299148.1"
                     /translation="MSTDDPVLVTVDNRVATITFNRPQKRNAMNPALNGRMLEVLDAL
                     EADEGVGVVVLTGAGEAWSAGMDLKEYFRDNDGKGRAATLRARRQSGGWWQRLMFFEK
                     PSIAMVNGWCFGGAFTPLVACDLAIAADDAKFGLSEINWGILPGGNVTRAVAEVMRHR
                     DALYYIMTGELFDGRKAAAMGLVNEAVPAAELGARVRAIADVLLEKNPVTLKAAKDTF
                     KRVRNMPWDAADDYIYAKLEQMLLLDPTRGRDEGLRQFLDDKTYKPGLGAYRRK"
     gene            complement(1205..1573)
                     /locus_tag="VHZ56_14105"
     CDS             complement(1205..1573)
                     /locus_tag="VHZ56_14105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299149.1"
                     /translation="MDTLPQNIRVGMTVYDSRHKSIGKIDDFKFSENETEPDVEPADI
                     DGTDRRGREGIIASIAEAFGGETLPEALRDRLLREGYIRLDTKGLLARDRFILPDQIA
                     STAGDEVVLNVDKDALIKRA"
     gene            complement(1633..2184)
                     /locus_tag="VHZ56_14110"
     CDS             complement(1633..2184)
                     /locus_tag="VHZ56_14110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009451062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbE family thiol:disulfide interchange protein"
                     /protein_id="HEX4299150.1"
                     /translation="MSRPLRIALALLPLAALIALLAVFALNIDRDPSLVQSVLIDKPA
                     PQFALPAVAGMTVPGFGTPQLKGRVSIVNVFASWCIPCREEHPVLEALKQETGIPLYG
                     INQKDAAGDAKAFLAALGNPYDAIGADSDGRTSIDWGVYGVPETFVVDAQGVIRFKHT
                     GPLSLDDIDRELVPAIARAHAAG"
     gene            complement(2181..2354)
                     /locus_tag="VHZ56_14115"
     CDS             complement(2181..2354)
                     /locus_tag="VHZ56_14115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HEX4299151.1"
                     /translation="MIAGNQDVVFIVWAYAGVGVATLALVGWVWLQSREVKSRLAALE
                     AQGIRRRSSGPAA"
     gene            complement(2351..3115)
                     /locus_tag="VHZ56_14120"
     CDS             complement(2351..3115)
                     /locus_tag="VHZ56_14120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003609648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease"
                     /protein_id="HEX4299152.1"
                     /translation="MTLDTTVPKPNWFSRLAHPGSFMAWSRPVLWPLGIVTALVFAAG
                     LYYAFFNSPADYQMGETVRIMYIHVPNAWLSQFVYAVMFVASLGTLVWRHPLADVAAR
                     SAAPLGATFTALALFSGSLWGRPTWGTFWEWDGRMTSTLILFFIYLAIIALWRAFDDQ
                     LKAARIVAIVTLVGALDIPVIKFSVDWWNTLHQPDSILTPGGPRMPASILTPLFVMLL
                     AFTLLFVLLHLVSMRTDILRRRAETLSRQAAARSPA"
     gene            complement(3270..3926)
                     /gene="ccmB"
                     /locus_tag="VHZ56_14125"
     CDS             complement(3270..3926)
                     /gene="ccmB"
                     /locus_tag="VHZ56_14125"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HEX4299153.1"
                     /translation="MRAFLALIGRDLRLAARAGGDGLTLVLFFVMVGALLPFAIGPDR
                     VELARLAPGIVWLAAFLALLLGLDRLFRADEEDGSLLLFRHAELPLEAIVAAKVIAHW
                     LLAAVPLLVASPLLAVLLSMDAPTWGRTLLSLLLGTPALAAFGAIGAAVTVSLKRGGL
                     LAPVLMLPLSIPVLIFGVAMGQGGDGSSAAALFLAALSLVSVAFCPFAVALALRVSSE
                     "
     gene            complement(3923..>4135)
                     /locus_tag="VHZ56_14130"
     CDS             complement(3923..>4135)
                     /locus_tag="VHZ56_14130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299154.1"
                     /translation="ARLLVSKRPVWILDEPVASLDAEGEKLVSELLKAHLSAGGAAIV
                     ATHHDIPIYFYSQPTLWMTLRLGPKP"
BASE COUNT          711 a         1296 c         1553 g          575 t
ORIGIN      
        1 gcgcggcgcg agccgaacgg cttttatcgc atcgtcgacc ggctcaagga catgtacgtg
       61 tcgggcggcg agaacgtcta tccggccgaa atcgaggcgg ttctggcggc ccatccggac
      121 atcgccgatg cggcggtgct gggggtgccc gatacgcgct ggggcgagac gggggttgcc
      181 ttcgtgacgc cgctcggcgg ggcggcagtc gacgccgcgg cgcttgccgc gcattgcgcc
      241 agccggctcg cgcgctacaa atgtcccgcc cgcttcatcg tcgtcgaagc gatcccgcgc
      301 agcgccgcgg gcaagatcct gaagccgctg ctgcgggcac ggctcaacca aggagacgcg
      361 ccatgagcac cgacgacccc gtcctcgtca cggtcgacaa ccgggtggcg accatcacct
      421 tcaaccggcc gcagaagcgc aacgccatga acccggcgct caacgggcgc atgctcgagg
      481 tgctcgatgc cctggaggcc gacgaggggg tcggcgtcgt ggtgctgacc ggggccggcg
      541 aggcgtggtc ggccggcatg gacctcaagg aatatttccg cgacaacgac ggcaagggcc
      601 gggccgcgac gctgcgggca cggcggcagt cgggcggctg gtggcaacgg ctgatgttct
      661 tcgaaaagcc cagcatcgcc atggtcaatg gctggtgctt cggcggcgcc ttcacgccgc
      721 tggtcgcctg cgacctggcg atcgcggcgg acgacgccaa attcgggctg agcgagatca
      781 actggggcat cctgccgggc ggcaacgtca cccgggcggt cgccgaggtg atgcggcacc
      841 gcgacgcgct ctactacatc atgaccggcg aactgttcga cgggcgcaag gcagcggcga
      901 tggggctggt caacgaggcg gtgccggcgg cggagctggg ggcgcgggtg cgggcgatcg
      961 ccgatgtgct gctcgaaaag aaccctgtta cactgaaggc ggcgaaggac accttcaagc
     1021 gcgtccgcaa catgccgtgg gatgccgccg acgactacat ctacgccaag ctcgagcaga
     1081 tgctgctgct cgatccgacc cgcggtcgcg acgaaggctt gcggcagttc ctcgacgaca
     1141 agacgtacaa gcccgggctt ggcgcctacc ggcgcaagta agtccgggcc tgtcgtttct
     1201 ggggtcaggc gcgcttgatc agcgcgtcct tgtcgacgtt cagcaccact tcgtcgccgg
     1261 cggtcgaggc gatctggtcg ggcaggatga agcggtcgcg ggccaggagg cccttggtgt
     1321 cgagccggat atagccctcg cgcagcaggc ggtcgcgcag cgcctcgggg agggtctcgc
     1381 cgccgaatgc ctcggcgata ctggcgatga tgccctcgcg gccgcggcgg tcggtgccat
     1441 cgatatcggc gggctcgacg tccggctcgg tctcgttttc ggagaatttg aagtcatcga
     1501 tcttgccgat cgatttgtgc cggctgtcgt agacggtcat gccgacgcgg atattctggg
     1561 gcagggtgtc catggggtcc tcctttggaa tgtggaggac aaacggccga ggcgggccgg
     1621 acgttcccgg gctcagccgg cagcgtgggc gcgggcgatc gccggcacca gttcgcggtc
     1681 gatgtcgtcg aggctgagcg ggccggtgtg cttgaagcgg atcacgccct gggcatcgac
     1741 gacgaaggtc tcgggcacgc catagacgcc ccagtcgatc gaggtgcggc cgtcgctgtc
     1801 ggcgccgatg gcgtcgtagg ggttgccgag cgcggcgagg aacgccttgg cgtcgccggc
     1861 ggcgtccttc tggttgatgc cgtagagcgg gatgccggtt tcctgcttca gtgcctcgag
     1921 caccgggtgc tcctcgcggc aggggatgca ccagctggca aagacgttga cgatgctgac
     1981 ccggcccttg agctgtggcg tgccgaagcc ggggaccgtc attccggcga cggccggcag
     2041 ggcgaattgc ggcgccggct tgtcgatcag caccgactgc accagcgagg ggtcgcggtc
     2101 gatgttgagc gcgaacaccg ccagcagggc gatgagcgcc gcaagcggca gcagggccag
     2161 cgcgatgcgg agcggtcggc tcaagcggcg ggcccggacg agcggcggcg gatgccctgc
     2221 gcctcgagcg cggcgagccg gctcttgacc tcacgcgact gcagccagac ccagccgacc
     2281 agcgccagcg tggcgacgcc gacgccggca taggcccaga cgatgaagac gacgtcctgg
     2341 ttgccggcga tcatgcgggg ctccgcgcgg cggcctgccg gctcagcgtc tcggcgcggc
     2401 ggcggaggat gtcggtgcgc atcgagacga ggtggagcag cacgaacagc agggtgaagg
     2461 cgagcagcat gacgaacagc ggggtgagga tcgaggccgg catcctgggg ccgccggggg
     2521 tgaggatgga gtcgggctgg tgcagagtgt tccaccagtc gacggagaat ttgatgacgg
     2581 gaatatcgag ggcgccaacg agggtgacga tggcgacgat gcgggcggcc ttgagctggt
     2641 cgtcgaaggc gcgccacagg gcgatgatgg cgaggtagat gaagaacagg atgagggtcg
     2701 aggtcatgcg gccgtcccat tcccagaacg tgccccaggt cggccggccc cagagcgaac
     2761 ccgaaaacag cgccagcgcg gtgaaggtgg cgccgagcgg ggcggcggag cgggcggcga
     2821 cgtcagccag cgggtggcgc cagaccaggg tgccgagcga ggcgacgaac atcacggcgt
     2881 agacgaactg gctgagccag gcgttgggca cgtggatgta catgatgcgc acggtctcgc
     2941 ccatctggta gtcggcgggc gaattgaaga aggcgtaata gagcccggcg gcgaagacga
     3001 gggcggtgac gatccccagc ggccagagca ccggccggct ccaggccatg aaactgccgg
     3061 ggtgcgcgag gcgcgagaac cagttgggtt ttgggacggt ggtgtcgagg gtcatggtgc
     3121 ttgtctctga ccctcccacc gggtcgttcc cgcgccggcg ggactctctg ttggctgccc
     3181 cgcttcctgc ttcgaaacgg agatccccgc tttcgcggcg atgaccgcgc ggaaaaacaa
     3241 cagcggcagc ggctgtttca tccggtgatc tattccgaag atacccgcaa ggccagcgcc
     3301 accgcaaacg ggcaaaacgc cacggaaacc aggctcaagg ccgcgaggaa cagggccgcg
     3361 gcgctgctgc cgtcgccgcc ctggcccatc gccaccccga agatcagcac cgggatcgag
     3421 agcggcagca tgagcaccgg ggccagcagg ccgccgcgct tcagcgacac ggtgacggcg
     3481 gcgccgatgg cgccgaaggc ggccagcgcc ggggtgccga gcagcagcga gagcagggta
     3541 cggccccagg tcggggcgtc catcgacagc agcaccgcca gcaatgggct cgcgaccagc
     3601 agcggcacgg ccgccagcag ccagtgggcg atcacttttg cggcaacgat ggcttcgagc
     3661 ggcagttccg catggcgaaa cagcagcagc gagccgtctt cctcgtcggc gcggaacagc
     3721 cggtcgagcc cgagcagcaa ggcgaggaac gccgcaagcc agacgatgcc gggggcgagc
     3781 cgggcgagct cgacgcggtc gggcccgatg gcgaacggca gcagcgcccc gaccatgacg
     3841 aagaacagca ccagcgtcag gccgtcgcca ccggcgcggg cggcgagcct gaggtcgcgg
     3901 ccgatgaggg cgaggaaagc cctcatggct tcggccccag gcgcagtgtc atccacagcg
     3961 tcggctgcga atagaaatag atcggaatgt cgtgatgggt ggcgacgatc gccgcgccgc
     4021 cggccgaaag gtgggccttg agcagctccg agaccagctt ttcgccctcg gcatcgagcg
     4081 aggcgacggg ctcgtcgagg atccagaccg gccgcttgct gaccagcagc cgggc
//
LOCUS       DATAZA010000572         5302 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1497135, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000572 DATAZA010000000
VERSION     DATAZA010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5302
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1497135"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..1340)
                     /locus_tag="VHZ56_14135"
     CDS             complement(126..1340)
                     /locus_tag="VHZ56_14135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007757914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TCR/Tet family MFS transporter"
                     /protein_id="HEX4299155.1"
                     /translation="MNRPLTVIFSAIVLDAVGIGLIFPILPSLLEDVTHAANVAPYIG
                     VMTALYAVMQFIFAPVLGSLSDRLGRRPVLLISLAGAAINYLFLAFAPNLWMLLLGRA
                     IAGLTSANVSVATAYITDISPEDKRARRFGLLNAMFGAGFIIGPVLGGVLGDHWLRLP
                     FIAAAALNGCNLLLAFFVLPESRTPSHEKIDLAALNPLRPLRWAFSMRGLLPIILIFF
                     LFSATGEAYGVCWALWGNDSFQWNGLWIGLSLGAFGICQTLAQALLPGPAVKLLGERA
                     AILTGMAGAAIALIVMAFATRGWMIFAIMPVFALGGIGTPALQSLATRQVDESKQGAF
                     QGVLASVVSLASIVAPLGFSSFYFLVRAQWPGAIWLSVVVLYAMIVPLVLRLRLNGAN
                     AAMASATTAPPG"
     gene            1572..2336
                     /locus_tag="VHZ56_14140"
     CDS             1572..2336
                     /locus_tag="VHZ56_14140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012654568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX4299156.1"
                     /translation="MSDVPAPKGVAWVTGAGSGIGRGLAKRLAEEGWQVAASARTAPD
                     LDSLVGEAPERITAFQLDVTDEAACAATAGRIEAALGPVDLAIFNAGSYFPTTADNFS
                     VTNFRRTVDVNLMGEVNCMGQVAPKMVARRAGHVVLMASLTGYVGLPTAASYGATKAA
                     LISLAQAFQPDFARFGVAITVITPGFVKTPATDKNKFPMPFLIGVDEAVDHIMRGIER
                     RQFEISFPWQMSGLVRLLALLPNRLKFAITRRMLPR"
     gene            complement(2283..3101)
                     /locus_tag="VHZ56_14145"
     CDS             complement(2283..3101)
                     /locus_tag="VHZ56_14145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018859305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1365 domain-containing protein"
                     /protein_id="HEX4299157.1"
                     /translation="MNSALYAGTVMHARLRPKKHRLRYRVFSLLIDLEEADALSQRLK
                     LFGHNRPAVFSLHDRDHGNGDGQLMPWALEQLRAAGIALEVPRIGVLCYPRIFGYVFN
                     PLTVYFCRDGDRLKAILHEVHNTFGERRTYVIAVAGDGQRVQQDCAKELYVSPFVQMN
                     CHYHFRIEPPADRVLVTIDETDADGLLLRASFAGERQPLTDATLWRALFAYPLMTLKV
                     MGAIHWEALKLWLKGVPYVPREPAASRVATSLVGASPLARQHAARDREFEAIGK"
     gene            complement(3098..4459)
                     /locus_tag="VHZ56_14150"
     CDS             complement(3098..4459)
                     /locus_tag="VHZ56_14150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006725284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX4299158.1"
                     /translation="MRTDYRSGEPQASKHVAVIGSGVAGLSAAWLLASRHRVTLYEAE
                     GRLGGHSNTVLAPTGETMTPVDTGFIVYNEKNYPNLTAMLSHLEVETEATDMSFGASL
                     DNGRIEYGSTGIRAMMGSENIGSWRFWQMLRDIYRFYSKAPGVLQRPECAGLTLGQFL
                     DEQGYSRAFIEDHLLPMGAAIWSITAEQMREYPLFAFVRFFMCHGLLDIVTARRPTWR
                     TVTGGSVKYVQKLQQRLADVRTGRGVAQIVRERGGVTVIDVAGERQWFTDVVIATHAD
                     QALRLLGDADAAETALLGAFRYTDNEAVLHSDTRLMPNRRSAWSAWNYIGESAGVGCE
                     RPLCVTYWMNCLQNLDPAHQLFVTLNPTRDIAPERFIRSFHYTHPLFDRAAVDAQQEL
                     WRLQDSRHTFFAGSYFGHGFHEDALQSGLAAAEAVGGVRRPWIVANENSRIAQAPRLE
                     AAE"
     gene            4711..5244
                     /locus_tag="VHZ56_14155"
     CDS             4711..5244
                     /locus_tag="VHZ56_14155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016556283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX4299159.1"
                     /translation="MSELLARIGRTRDVDDFEALFRHFAPRLKAYMARTGSPGPAEEL
                     MQETMVAVWNKAVLYDPGKGAASTWIFAIARNLRIDAYRREKHPEFDENDPALQPQAQ
                     PVADRLLEIEQQAGQIRDAMQVLPPDQVEVLRLAYFEDKSQSAIAAALDLPLGTVKSR
                     MRLALVKLRAALGGETG"
BASE COUNT          940 a         1815 c         1714 g          833 t
ORIGIN      
        1 caccccgcac aggacctcac gggccgcatc gtttcgcctg acgtccgatg atcgccgagc
       61 gccgttgcag ccgaggcatg caggacgaag ccatcgcctt gcccgccggg cgttcgcaca
      121 cattgtcatc caggcggagc agtcgtagcc gaggccatcg ccgcattggc cccgttcagc
      181 cgcagccgca ggaccagcgg cacgatcatc gcgtagagga cgacgaccga cagccagatc
      241 gctcccggcc actgcgcccg cacgaggaag taaaagctcg agaaaccgag cggcgcgacg
      301 atcgatgcga ggctcaccac ggaggcgagg acgccctgga acgcgccctg cttgctctcg
      361 tccacctgcc gggtcgccag cgactgcagg gccggtgtgc cgatgccgcc cagcgcgaac
      421 accggcatga tggcgaagat catccagccg cgggtggcaa acgccatgac gatgagcgcg
      481 attgccgcgc cggccatgcc ggtcaggatg gccgcccgtt cgccgagcag cttgaccgcc
      541 ggccccggaa gcagcgcctg cgcgagggtc tggcagatgc cgaaggcccc gagcgaaagg
      601 ccgatccaaa ggccgttcca ctggaaactg tcgttccccc acagggccca gcagacgcca
      661 taggcctcgc cggtggcgct gaagaggaag aagatgagga tgatcggcaa caggccccgc
      721 attgaaaacg cccagcgcag cggtcgcagc gggttgagcg ccgccaggtc gatcttctcg
      781 tggctcgggg tacgcgactc cggcaggacg aagaacgcca gcagcaaatt gcagccgttc
      841 agcgccgccg ccgcgatgaa gggcagccgc agccagtggt cgccgagcac gccgccgagc
      901 actggtccga tgatgaagcc ggcgccgaac atggcgttca gcagcccgaa gcgccgggcc
      961 cgcttgtcct cgggggagat gtcggtgatg tacgccgtcg ccaccgagac gttggcgctg
     1021 gtcaggccgg caatggcgcg gccgagcagc aacatccaga gattgggcgc gaaggccagg
     1081 aacaggtagt tgatcgcggc gccggcgagc gagatcagca gtaccggccg ccggccgagc
     1141 cgatcgctca gcgagccgag caccggtgcg aagatgaact gcatgaccgc atagagggcg
     1201 gtcatcaccc cgatataggg cgccacgttc gccgcgtggg tcacgtcctc gagcagcgac
     1261 ggcaggatgg gaaagatcag cccgatgccc acggcatcga ggacgatggc agaaaagatg
     1321 acagtcagcg gtctgttcat gagggcgtgc tccggtcgca gggatgcatc gccgctggcg
     1381 gaccgtccca atgaccgtcc gggtatgctc gaccgtcgag gcgacggaag cttttcgcga
     1441 cagcgcccac ttaggccagc ccgccacgcg cgacaaggtc tttttgccgt cgaccggggc
     1501 gcctcctctg aactttctga accggtccct cgtttctgcc gtacacccac cggcatcacg
     1561 gagacgaata gatgagcgac gtgcccgccc ccaagggagt tgcctgggtc accggcgccg
     1621 gcagcggcat cggccgcggt cttgcaaagc ggctggccga ggagggatgg caggtcgctg
     1681 ccagcgcccg cacggcgcct gatctcgact cgctggtggg cgaggcgcca gaacggatca
     1741 ccgccttcca gctggacgtc accgacgagg ccgcctgcgc cgccactgct ggtcgcatcg
     1801 aggcggccct cgggccggtc gacctcgcga tcttcaacgc cggctcgtac tttcccacca
     1861 ccgccgacaa tttttccgtg accaatttcc gccggaccgt cgacgtgaac ctcatgggcg
     1921 aggtcaactg catgggacag gtggcgccaa aaatggtcgc ccgccgcgcc ggccacgtcg
     1981 tgctcatggc ctcgctcacc ggctatgtcg ggctcccgac ggcagcgtcc tatggcgcca
     2041 ccaaggcggc gctgatcagc ctggcgcagg ctttccagcc ggacttcgcg cgcttcggcg
     2101 tcgccatcac ggtcatcact ccgggtttcg tcaagacccc ggcgaccgac aagaacaagt
     2161 ttccaatgcc attcctgatc ggtgtcgacg aagccgtgga tcacatcatg cgcggcatcg
     2221 agcggcggca gttcgagatc agtttcccgt ggcagatgag cggcctcgtc cgcttgctgg
     2281 cgctacttcc caatcgcctc aaattcgcga tcacgcgccg catgctgccg cgctagcgga
     2341 gaggccccga ccaggctcgt agcgacgcgg gaagccgccg gctcgcgtgg cacgtagggc
     2401 acgcctttga gccacagctt cagcgcctcc cagtggatgg cgcccatcac cttgagcgtc
     2461 atcagcgggt aggcgaacaa agcccgccac agcgtcgcgt cggtgagcgg ctgccgttcg
     2521 ccggcaaagc tcgcgcgcaa cagcaatccg tcggcatcgg tctcgtcgat cgtcaccagc
     2581 accctgtcgg ccggcggctc gatccggaag tgatagtggc agttcatctg cacgaagggc
     2641 gacacataga gctccttcgc acagtcctgc tgcactcttt gcccgtctcc ggccacggca
     2701 atgacgtagg tccgccgctc gccgaaggtg ttgtgcacct cgtgcaggat cgccttcagc
     2761 ctgtcgccgt cgcggcagaa ataaaccgtc agcggattga acacgtagcc gaagatccgc
     2821 gggtagcaga gcaccccgat cctcggcacc tccagcgcaa tgcccgcggc gcgcagctgc
     2881 tccagcgccc agggcatcag ctggccgtcg ccattgccgt gatcgcggtc gtgcagcgaa
     2941 aacaccgccg gccggttgtg gccgaacaat ttcagccgct gcgacagcgc gtcggcttcc
     3001 tcgagatcga tcagcagcga gaacacgcga tagcgcaggc ggtgcttttt gggccgcagc
     3061 cgggcgtgca tcaccgttcc cgcatagagc gccgagttca ttcggcggcc tccagccggg
     3121 gcgcctgcgc gatgcggctg ttttcattgg ccacgatcca tggccgccga acgccgccaa
     3181 cggcctctgc cgccgcgagc cccgattgca acgcatcctc gtgaaagcca tggccgaaat
     3241 agctgcctgc aaagaacgtg tggcggctgt cctgcagccg ccagagctcc tgctgggcgt
     3301 cgactgcggc gcgatcgaac aacggatggg tgtagtggaa cgagcgaatg aatctctcgg
     3361 gcgcaatgtc gcgcgtcgga ttgagcgtca cgaacagctg atgcgccggg tcgaggttct
     3421 gcaggcagtt catccagtag gtgacgcaca gcggtcgctc gcagccgacg ccggcactct
     3481 cgccgatata gttccaggcc gaccacgcgc tccggcggtt cggcatcagc cgcgtatccg
     3541 aatgcagcac cgcttcattg tcggtgtagc ggaaggcgcc gaggagcgcg gtctctgctg
     3601 cgtccgcgtc gccgagcagc cgcagggcct gatccgcatg cgtcgcgatc accacgtcgg
     3661 taaaccactg ccgctcgccg gccacatcga tcaccgtcac gccgccgcgt tcgcgcacga
     3721 tttgcgccac gccgcgcccg gtgcgcacat ccgccagccg ctgctgcagt ttctgcacgt
     3781 atttgacact gccgcccgtc accgtccgcc aggtgggccg gcgcgccgtc acgatgtcca
     3841 gcaggccgtg gcacatgaag aagcgcacga acgcgaacag cggatactcg cgcatctgct
     3901 cggctgtgat cgaccagatc gctgcgccca tcggcagcag gtgatcctcg atgaacgccc
     3961 tggaatatcc ctgttcgtcg aggaactgcc ccagcgtcag gccggcgcat tccggccgct
     4021 gcagcacgcc cggcgccttg gaatagaacc gatagatgtc gcgcagcatc tgccagaagc
     4081 gccagctgcc gatattctcg ctgcccatca tcgccctgat gccggtcgag ccgtattcga
     4141 tccggccgtt gtcgagcgat gcaccgaacg acatgtccgt cgcctcggtc tcgacctcca
     4201 ggtgcgacag catggccgtg aggttgggat agttcttctc gttgtagacg atgaagccgg
     4261 tgtcgaccgg ggtcatggtt tcgccggtcg gggcgagaac cgtgttcgaa tgcccgccga
     4321 ggcgcccttc ggcctcgtac agcgtcaccc ggtggcggct cgccagcagc caggccgccg
     4381 acagcccggc gacgccggaa ccgattaccg cgacatgctt gctggcctgc ggctccccgc
     4441 ttcggtagtc ggtgcgcacc gtgacatcct gctctcgtga cagagcagat acgggccgca
     4501 gccaggtttg gatgcagcct cgggtaaatt ctgtcgccgg gtgatccgcg cccggcggcc
     4561 cggcgtaagc gccccatgaa cccggagatg agctcggaga tttccccagc caccgccacg
     4621 tggcacaaga gatttcctcc ggtcgcgcca acgcgtccgg acaggcgaaa acctttgggc
     4681 ggcatggtcg acacccaacc tcaggccaat atgtccgagc tcctggccag gatcggccgg
     4741 acgcgggacg ttgatgattt cgaggcgctg ttccgccact tcgcgccgcg gctgaaagcc
     4801 tacatggcgc gaaccggcag ccccgggccg gctgaggaat tgatgcagga aaccatggtc
     4861 gcggtgtgga acaaggcggt gctttacgat ccgggcaagg gcgcggcctc cacctggatc
     4921 ttcgccatcg cgcgcaatct gcgcatcgac gcctatcgtc gcgaaaaaca cccggagttc
     4981 gacgagaacg atccggcgct ccagccccag gcgcagccgg tcgccgaccg cctgctggag
     5041 atcgagcagc aggcgggcca gattcgcgac gccatgcagg tgctgccgcc cgaccaggtc
     5101 gaggtgctgc gcctcgccta tttcgaggac aagtcgcaga gcgctatcgc cgcggcgctc
     5161 gacctgccgc tcggtacggt caagtcgcgc atgcggctcg ctttggtgaa gctgcgcgcc
     5221 gcgctcgggg gtgagaccgg atgatgcccc gccaccacgt cgccgacgat ctgttgctgg
     5281 gctatgccgc cggcagcctc gc
//
LOCUS       DATAZA010000573         3884 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_456120, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000573 DATAZA010000000
VERSION     DATAZA010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3884
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456120"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(279..608)
                     /locus_tag="VHZ56_14160"
     CDS             complement(279..608)
                     /locus_tag="VHZ56_14160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018244428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEX4299160.1"
                     /translation="MVSGCLSFETGESLAGANQCGGASWYSLPGQRTASGERMNPNAM
                     TAAHKTLPLGTVVKVVNQRTGRSIQVTINDRGPYIRGRIIDLSPAAARQLGIIPQGVG
                     AVCLYHA"
     gene            1011..2354
                     /locus_tag="VHZ56_14165"
     CDS             1011..2354
                     /locus_tag="VHZ56_14165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015340818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX4299161.1"
                     /translation="MGEAALRGGIAPGRLEPEQYDRNFADLHPPLDRHEAFVEADRCY
                     FCYDAPCQTACPTSIDIPLFIREILTDNPLGAAETIFEQNILGGMCARVCPTEQLCEE
                     ACVREAAEGKPVKIGLLQRYATDAAMDRDVQFFERAAPTGRTIAVVGAGPAGLACAHR
                     LSMHGHDVVIFDAREKAGGLNEYGIASYKTPGGFAQAEVDYVTAIGGIRIETGKLLGE
                     HFSLSELTGKYDAVFLGMGLGGVNALRAEGEAADGVDNAIDFIAGLRQASDLRSLPIG
                     RRVVVIGGGMTAVDAAVQSKLLGAEEVTMVYRRGKAQMNASEFEQDLAAARGVTIRHW
                     LAPTRVLAVAGKVSGIELSYMALDAAGTLKPTGETTTIACDQVFKAIGQTLATDGEGV
                     TLAGGKIEVDEEGRTSMPKVWAGGDCATGGDDLTVTAVAEGRDAAESINRFLGRR"
     gene            2354..2737
                     /locus_tag="VHZ56_14170"
     CDS             2354..2737
                     /locus_tag="VHZ56_14170"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase superfamily protein"
                     /protein_id="HEX4299162.1"
                     /translation="MMFTRIHFDTVPAVDVERARDFYRDKLGFTVERDNPYGGTRWVF
                     MRIPGAGTLLHFDKQDAVPPSPTPALVLVTEDVDGTCETLKSRGVPIKRGPEDAPWEP
                     GTRWAMIDDSEGNLVLIQTAPGEGS"
     gene            2737..>3884
                     /gene="preA"
                     /locus_tag="VHZ56_14175"
     CDS             2737..>3884
                     /gene="preA"
                     /locus_tag="VHZ56_14175"
                     /EC_number="1.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006172651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017113 - dihydropyrimidine dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0006210 - thymine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006212 - uracil catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dihydropyrimidine dehydrogenase
                     subunit PreA"
                     /protein_id="HEX4299163.1"
                     /translation="MADLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVW
                     KTLGEAGPPVVNVNGPRYGAIWAGDRRLMGFNNIELITDRDLQKNLREIKEIKMKWPD
                     RAVVASIMVPCEEAPWKAILPLVEETGCDGIELNFGCPHGMSERGMGAAVGQVPEYVA
                     MVVRWCKQYSRMPVITKLTPNVTDIRRPARAAHEAGTDAVSLINTINSITAVDLDLMA
                     PEPTIDGKGSHGGYCGPAAKPIALHMVAEIARDRETLGLPISGIGGITTWRDAAEFMA
                     LGAGNVQVCTAAMVYGFKIVEEMVSGLSNWMDEKGYATLDDFVGRASRNVTDWQYLNL
                     EYITKARIDQDLCIKCGRCHIACEDTSHQAIMKEKNGVRHFEVMDDECV"
BASE COUNT          701 a         1333 c         1253 g          597 t
ORIGIN      
        1 gccttgatgg ccacgtcggt gccggcgatg atctcgcccg aatgcacgtt cacccagcgt
       61 ccgttgcgga ccagcatgtc ggccggcgcc cggcccatcg cgacgtcgac gagctcaggc
      121 gcggtctcgg accagggacg gatgggcatg cgggtttcct cgtggcgcgg cagccgatga
      181 gacggacgcg cggcagcgtc gtcaagggcg gacggtgtgg cccaaaacag aaggggcgcc
      241 ccgccgggcg cccccttgtc tgctgcagga tcgatcgatc aggcgtgata gaggcaaacg
      301 gcgccaacgc cctgcgggat gatgcccagc tggcgggcag ccgccgggct cagatcgata
      361 atgcggcccc tgatgtacgg gcccctgtcg ttgatagtca cctggatgga ccgtccggtc
      421 ctctggttga ccaccttgac cacagtcccc agtggaagcg tcttgtgggc cgcggtcatg
      481 gcgttggggt tcatccgttc cccacttgcg gtccgctgtc cgggcaaaga gtaccaggac
      541 gcaccaccgc attgattggc gcccgctaaa ctctctccgg tctcgaacga caaacaaccc
      601 gagaccagag cagcggcgac aacgatgtac ttaatcaaac aacttactca cgctagttaa
      661 cgacggggta aggctagacg aagggctgtg gccagattgt gggcggaatc cggcggagaa
      721 aaatctggcg ccacatgttg ccggcaggca tcacggaatt ggcattcgac tcggctttac
      781 tgcccagacg aaaaacgccg cgagtcagcg gcttagcggc agagtctcac gcggcgtccc
      841 gacgcctcta acagccgttg cgtcaggtcg ccgcaaccct ggaacgaatg gcgaatgcca
      901 catcccggcg ggcaatcttt gaccgtttga taaaatttcc ggccatgcta gcgtccgtgc
      961 gaaggcgcgg tccgggcgac cgtgccgacc cgctgcaggg aggcgcttgg atgggcgagg
     1021 cggcattgag gggcggcatc gcgcccggac ggctcgagcc tgagcaatac gaccggaact
     1081 ttgccgacct gcatccgccg ctcgaccggc acgaggcctt cgtcgaggcc gaccgctgct
     1141 acttctgcta cgacgccccc tgccagaccg cctgcccgac cagcatcgac atcccgctgt
     1201 tcatccgcga gatcctgacc gacaacccgc tcggcgccgc cgaaaccatc ttcgagcaga
     1261 acatcttggg cggcatgtgc gcccgcgtct gccccaccga gcagctctgc gaggaagcct
     1321 gcgtgcgcga ggcggccgag ggcaagccgg tcaagatcgg cctgctgcag cgctacgcca
     1381 ccgatgccgc gatggaccgg gacgtgcagt tcttcgagcg cgccgccccg accggcagga
     1441 cgatcgccgt cgtcggtgcc ggaccggccg gcctcgcctg tgcccatcgc ctgtcgatgc
     1501 acggccacga cgtggtgatc ttcgacgccc gcgaaaaagc cggcggcctc aacgagtacg
     1561 gcatcgcctc ctacaagacc ccgggcggct tcgcccaggc cgaggtcgac tacgtcaccg
     1621 ccatcggcgg catccgcatc gagaccggca aactgctcgg cgagcacttc tcgctcagcg
     1681 agttgaccgg caaatacgac gcggtattcc tcggcatggg gctgggcggc gtcaacgcgc
     1741 tgcgcgccga gggcgaggcc gccgacggcg tcgacaacgc catcgacttc atcgccgggc
     1801 tgcgccaggc gagcgatttg cgcagcctgc cgatcggccg ccgcgtcgtc gtcatcggcg
     1861 gcggcatgac cgcggtcgat gccgccgtgc aatcgaagct cctcggcgcc gaggaggtga
     1921 ccatggtcta tcgccgcggc aaggcgcaga tgaacgcctc ggaattcgag caggacctcg
     1981 cggccgcccg cggcgtcacc atccgccact ggctcgcccc gacgcgcgtg ctggctgtcg
     2041 ccggcaaggt ctcgggcatc gagctgagct acatggcgct cgacgccgcc ggcaccctca
     2101 agccgaccgg cgagaccacc accatcgcct gcgaccaggt attcaaggcc atcggccaga
     2161 ccctcgccac cgacggcgag ggcgtgacgc tggccggcgg caagatcgaa gtcgacgagg
     2221 aaggccgcac ctcgatgccg aaggtctggg ccggcggcga ctgcgccacc ggcggtgacg
     2281 acctcacggt caccgccgtg gccgagggcc gcgacgccgc cgagagcatc aaccggttcc
     2341 tcgggcgccg ctgatgatgt ttacacgcat ccacttcgac accgttccgg ccgtcgatgt
     2401 cgagcgggcg cgcgatttct accgcgacaa gctcggcttc accgtcgagc gcgataatcc
     2461 ctatggcggc acgcgctggg tgttcatgcg catccccggc gccggcacgc tgctgcattt
     2521 cgacaagcag gacgccgttc caccatcacc gaccccggcg ctggtgctgg tgaccgagga
     2581 cgtcgacggc acttgcgaga ccctgaaatc gcgcggtgtg ccgatcaagc gcggccccga
     2641 ggacgcgcca tgggagcccg gcacccgctg ggcgatgatc gacgacagcg agggcaacct
     2701 cgtgctgatc cagaccgctc ccggggaggg ttcctgatgg ctgacctgcg caacaatttc
     2761 gtcggcatca aatcgcccaa tccgttctgg ctcgcctcgg cgccgccgac cgacaaggcc
     2821 tacaatgtcg agcgcgcctt caaggccgga tggggcggtg tcgtctggaa gaccctcggc
     2881 gaggccggcc cgccggtggt caacgtcaac ggcccgcgct acggcgccat ctgggccggc
     2941 gaccgccggc tgatgggctt caacaacatc gagctgatca ccgatcgcga cctgcagaag
     3001 aacctgcgcg agatcaagga aatcaagatg aagtggcccg accgcgcggt cgtcgcctcc
     3061 atcatggtac cgtgcgagga agcgccatgg aaggccattc taccgctggt cgaggaaacc
     3121 ggctgcgatg gcatcgagct caatttcggc tgcccgcacg gcatgagcga gcgtggcatg
     3181 ggcgccgccg tcggtcaggt gcccgaatat gtcgcgatgg tcgtgcgctg gtgcaagcag
     3241 tatagccgca tgccggtgat caccaagctc acccccaacg tcaccgacat ccgccgcccg
     3301 gcgcgcgccg cccacgaggc gggtaccgac gcggtcagcc tcatcaacac catcaattcg
     3361 attaccgccg tcgatctcga cctgatggcg cccgagccga ccatcgatgg caagggcagc
     3421 catggcggct attgcggccc ggcggccaag ccgatcgcgc tgcacatggt cgccgagatc
     3481 gcccgcgacc gcgagaccct cggcctcccc atctccggca tcggcggcat caccacctgg
     3541 cgcgacgccg ccgagttcat ggcgctcggc gccggcaacg tgcaggtctg caccgccgcc
     3601 atggtctatg gtttcaagat cgtcgaggag atggtctccg gactctccaa ctggatggac
     3661 gagaagggtt acgccacgct cgacgatttc gtcggcaggg cgtcgcgcaa cgtcaccgac
     3721 tggcagtatc tcaatctcga atacatcacc aaggctcgca tcgatcagga tctctgcatc
     3781 aagtgcggcc gctgccacat tgcctgcgag gacacctcgc accaggcgat catgaaggag
     3841 aagaacggcg ttcggcattt cgaggtgatg gacgacgaat gcgt
//
LOCUS       DATAZA010000574         4166 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3476544, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000574 DATAZA010000000
VERSION     DATAZA010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4166
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3476544"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..831
                     /gene="pstS"
                     /locus_tag="VHZ56_14180"
     CDS             <1..831
                     /gene="pstS"
                     /locus_tag="VHZ56_14180"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA];
                     GO_process: GO:0035435 - phosphate ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HEX4299164.1"
                     /translation="GIKQIQAKTVTFGATDAPLKADQLEKDGFAQWPMIMGAIVPVVN
                     IDGVKAGDMVLDGDTLAKIYLGTITKWDDPAIKKLNPKLTLPSAAISVVHRADGSGTT
                     FNFTDYLSKVSADWKSKVGSGTAVEWPAGVGAKGNEGVSGNIGQAKNTIGYVEYAYAK
                     QNKLAYTGLVNKAGKTVQPTNEAFQAAASNADWANAPGYYLILTDQPGDKSWPIVAST
                     FILMHKDATDKAASQEAIKFFTYSFEKGAKMAEDLDYIPMPDAVIKQIEKTWSAEIKS
                     "
     gene            1046..2035
                     /gene="pstC"
                     /locus_tag="VHZ56_14185"
     CDS             1046..2035
                     /gene="pstC"
                     /locus_tag="VHZ56_14185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HEX4299165.1"
                     /translation="MAVQSDLMEAAGPYDRARALNAFKLGDVTFYWITRVCAISVLLI
                     LGGIILSLIVGAWPAMQQYGFAFLWTQRWAPSADPPVLGALGPIYGTLVTSFIAMLIA
                     IPVGLGIAIFLTELCPQWLRRPIGIAIELLAGIPSIIYGMWGFFVLGPFLAYTFQPFM
                     ISVFDGVPLLGSIFGGPPSYLSLFNAALILAIMVLPFITAISVDVFKTVPPVLKEAAY
                     GVGCTTWEVVRNVVIPYTRVGVIGGIMLALGRALGETMAVTFIIGNSFRISSSIFGPG
                     TTISAAIASEFAESDGLHQSGLILLGLLLFVLTFFVLAAARLMLLRLEKKAGN"
     gene            2039..2884
                     /gene="pstA"
                     /locus_tag="VHZ56_14190"
     CDS             2039..2884
                     /gene="pstA"
                     /locus_tag="VHZ56_14190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HEX4299166.1"
                     /translation="MNPIYSKRRRKDIVIRTLCFGAALFGVTWLALILFTLFYNGVAG
                     LSVQLFTQNTPPPGSTEGGLLNAIVGSIIMTVAGVGIGAPLGLFAGTYLAEYGKHDRL
                     TSVIRFINDILLSAPSIIIGLFIYGAVVVPMGSFSAIAGSLALAVIVIPVVLRTTEDM
                     LGLVPNPLREAASALGLPRSLVIKRIAYRAARSGLITGVLLATARVAGETAPLLFTAL
                     SNQFFSLDPTKTMANLPVTINNFVQSPYAYWKELAWSGALIITLTVLALNIGARLIGA
                     ERTAK"
     gene            2881..3723
                     /gene="pstB"
                     /locus_tag="VHZ56_14195"
     CDS             2881..3723
                     /gene="pstB"
                     /locus_tag="VHZ56_14195"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HEX4299167.1"
                     /translation="MNDLSISMSNNTGGNSGNNAGPVPAVLPEAAPKVSVRNLNFYYG
                     EHHALKNINITLGTNRVTAFIGPSGCGKSTLLRIFNRMYDLYPGQRATGQLMLDQTNI
                     LDPKLDLNLLRARVGMVFQKPTPFPMTIYENIAFGIRLYEKISKSEMDGRVEKALRGG
                     ALWNEVKDKLNASGLSLSGGQQQRLCIARTVAVRPEVILFDEPCSALDPISTAKIEEL
                     IQELAEDYTIAIVTHNMQQAARVSDKTAFMYLGELIEFDDTNKIFTSPSDRRTQDYIT
                     GRFG"
     gene            3795..>4166
                     /locus_tag="VHZ56_14200"
     CDS             3795..>4166
                     /locus_tag="VHZ56_14200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoU domain-containing protein"
                     /protein_id="HEX4299168.1"
                     /translation="MASEHTAKAFDSDLQELTRLVAEMGGLAERMIVESVDALIRRDV
                     ALGKRVVAADAEIDSLQHVIEERAVLTIARRQPMAVDLREIVGAMRVATDLERIGDLA
                     KNMGKRVAALESEFQPLKLIRG"
BASE COUNT          749 a         1373 c         1278 g          766 t
ORIGIN      
        1 ggcatcaagc agatccaggc caagaccgtg accttcggcg ccaccgacgc gccgctcaag
       61 gccgaccagc tcgagaagga cggcttcgcg cagtggccga tgatcatggg cgcgatcgtt
      121 ccggtcgtga acatcgacgg cgtcaaggcc ggcgacatgg tgctcgacgg cgacaccctc
      181 gccaagatct atctcggcac catcaccaag tgggatgatc cggcgatcaa gaagctcaat
      241 ccgaagctga cgctgccgtc ggccgcgatc tcggtcgtgc accgcgcgga tggttcgggc
      301 actaccttca acttcaccga ctatctctcc aaggtcagcg ccgactggaa gtcgaaggtc
      361 ggctccggca ccgcggtgga atggccggct ggcgtcggcg ccaagggaaa tgaaggcgtg
      421 tccggcaata tcggccaggc caagaacacc atcggctacg tcgaatacgc ctatgccaag
      481 cagaacaagc tggcttacac cggcctcgtc aacaaggccg gcaagaccgt gcagccgacc
      541 aacgaggctt tccaggcggc cgcttccaac gccgactggg ccaatgcgcc cggctattac
      601 ctgatcctga ccgaccagcc cggcgacaag tcgtggccga tcgtcgcctc gaccttcatc
      661 ctgatgcaca aggatgcgac cgacaaggcg gcgtcgcagg aagccatcaa gttcttcacg
      721 tactcgttcg agaagggcgc caagatggcc gaggacctcg actacatccc gatgccggac
      781 gccgtcatca agcagatcga gaagacctgg tcggccgaga tcaagagctg agacgatcta
      841 tcgctgctct ccacccggcc cggggcaatc cgggccgggc ttcccggatc ggcgaggccg
      901 gacatctccg gcttcgctcg ggaccacaac gcgctgaacg cgcaagtccc tgaacctaca
      961 agtcctcgaa cgtacaagtc ccttatccgg ggaagcgatt ttcaggccat agagtgatat
     1021 cgtacagggg attggcgtgg cagaaatggc cgttcagagc gatctaatgg aagccgccgg
     1081 accttacgat cgcgcgcgcg ccctcaatgc gttcaagctc ggcgacgtca cattttactg
     1141 gatcaccagg gtctgcgcga tctcggtgct gctgatcctc ggcggcatca tcctgtcgtt
     1201 gatcgtgggc gcgtggcccg cgatgcagca atatggtttt gcgttcctgt ggacgcagcg
     1261 ctgggcgccg tccgccgacc cgccggtgct gggcgcgctc gggccgatct acggcacgct
     1321 ggtgacctcg ttcatcgcga tgctgatcgc gattcccgtc ggcctcggca tcgcgatctt
     1381 cctcaccgag ctgtgcccgc aatggctgcg ccgcccgatc ggcatcgcga tcgaactttt
     1441 ggcgggcatt ccctcgatca tctacggcat gtggggcttc ttcgtgctgg ggccgtttct
     1501 ggcctacacg ttccagccct tcatgatctc ggtgttcgac ggcgttccct tgctcggctc
     1561 gatcttcggc ggcccgccgt cctatctcag cctgttcaac gccgcgctga tcctcgccat
     1621 catggtgctg cccttcatca ccgcgatttc ggtcgacgtg ttcaagacgg tgccgccggt
     1681 gctgaaggag gcggcctatg gcgtcggctg caccacctgg gaagtggtgc gcaacgtggt
     1741 gatcccctac acccgggtcg gcgtgatcgg cggcatcatg ctggcgctcg gccgcgcgct
     1801 cggtgagacc atggcggtga ccttcatcat cggcaactcg ttccgcattt cctcttcgat
     1861 tttcgggccg ggcaccacga tctcggcggc gatcgcctcc gagttcgccg aaagcgacgg
     1921 cctgcatcaa tccggcctga tcctgctcgg tctgttgctg ttcgtgttga cgttcttcgt
     1981 gctggccgcc gcgcggctaa tgctgctgcg gctggaaaag aaggcgggga actagaccat
     2041 gaacccgatc tattcgaagc gccgccgcaa ggacatcgtg atccgcacgc tgtgcttcgg
     2101 ggctgccttg ttcggggtca cctggctggc gctgatcctg ttcacgctgt tctataacgg
     2161 cgtcgccggg ttgagcgtgc aactcttcac ccagaacacg ccgccgccgg gctcgaccga
     2221 aggcggcctg ctcaacgcca ttgtcggctc gattatcatg acggtcgccg gcgtcggcat
     2281 cggcgcgccg ctcgggttgt tcgccggcac ctatctcgcc gaatacggca agcacgacag
     2341 gctcacctcg gtgatccgct tcatcaacga catcctgctg agcgccccct cgatcatcat
     2401 cggcctgttc atctacggcg cggtggtggt gccgatgggc agcttctcgg caatcgcggg
     2461 ttcgctggcg ctcgcggtga tcgtcattcc cgtcgtgctg cgcaccaccg aggacatgct
     2521 gggcctggtg cccaatccgc tgcgtgaagc agcgtccgcg ctcggcctgc cgcgctcgct
     2581 ggtgatcaag cggatcgcct accgcgccgc gcgctccggc ctgatcaccg gcgtattgct
     2641 cgccaccgcg cgcgttgccg gcgaaaccgc gcccttgctg ttcaccgcgc tgtcgaacca
     2701 gttcttcagc ctcgatccga ccaagacgat ggcgaacctg ccggtgacca tcaacaattt
     2761 cgtgcagagc ccctacgcct actggaaaga gctcgcctgg agcggcgccc tgatcatcac
     2821 gctcaccgtg cttgccttga atattggcgc ccgcctgatc ggcgccgaga ggaccgcaaa
     2881 atgaacgacc tgtcgatttc catgagtaac aatacgggcg gcaatagcgg taacaatgcc
     2941 ggtccggtgc ccgcggtgct gcccgaggcg gcgccgaaag tcagcgtgcg caacctcaat
     3001 ttctattacg gcgagcacca cgcgctgaag aacatcaaca tcacgctcgg caccaaccgc
     3061 gtcaccgcct tcatcggccc gtccggctgc ggcaagtcga ctctgctgcg gatcttcaac
     3121 cggatgtacg acctctatcc gggccagcgc gccaccgggc aattgatgct ggaccagacc
     3181 aacatcctcg atcccaagct cgacctcaat ctgctgcgcg cccgcgtcgg catggtgttc
     3241 cagaagccga cgccgtttcc gatgacgatc tacgagaaca tcgccttcgg tatccgcctc
     3301 tacgagaaga tctcgaagtc cgagatggac ggccgggtcg agaaggcgtt gcgcggcggc
     3361 gcgctgtgga acgaggtcaa ggacaagctc aacgcctccg gcctcagcct gtccggcggc
     3421 cagcagcagc ggctgtgcat cgcccgcacc gtcgcggtgc ggcccgaggt gatcctgttc
     3481 gacgagccgt gctcggcgct cgatccgatc tcgaccgcca agatcgagga actgatccag
     3541 gaactggcgg aggactacac catcgccatc gtcacccata acatgcagca ggccgcgcgg
     3601 gtctccgaca agaccgcgtt catgtatctt ggcgagctga tcgaattcga cgacaccaac
     3661 aagatattca cctcgccgag cgatcggcgt acccaggact acattactgg tcggttcggc
     3721 tagcgttcag attgctgtcg gcggtctccc ggacagggag gtcgccgagc caccggatcg
     3781 atacggagag aaatatggcc agtgaacata ccgccaaggc gttcgacagc gatttgcagg
     3841 aactgacccg gctggtcgcc gagatgggcg gtcttgccga acgcatgatc gtggagtcgg
     3901 tcgacgcgct gatccgccgc gacgtcgcgc tgggcaagcg cgtggtggcg gccgatgccg
     3961 agatcgacag cctgcagcac gtgatcgagg agcgcgcggt actgaccatc gcccgccgcc
     4021 agccaatggc ggtggatttg cgcgagatcg tcggcgcgat gcgggtggcg accgacctgg
     4081 aacggattgg cgacctcgcc aagaacatgg gcaagcgggt cgcggcgctc gagagcgagt
     4141 tccagccgtt gaagctgatc cgcggc
//
LOCUS       DATAZA010000575         1752 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_805263, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000575 DATAZA010000000
VERSION     DATAZA010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_805263"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..955
                     /locus_tag="VHZ56_14205"
     CDS             <1..955
                     /locus_tag="VHZ56_14205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010915129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEX4299169.1"
                     /translation="GEVLFDVGSMPDYGALSGRDLDSNLAGARVEVDTHKRNPADFVL
                     WKSSSATEPGWDSPWGRGRPGWHIECSAMSERYLGKVFDIHAGGLDLIFPHHENEIAQ
                     SRCAHGTPAMARTWLHNGFLQVEGQKMSKSLGNFITIRELLETGKFGGRQWPGEVLRL
                     AMLMTHYREPIDFTVKRLEEAETKLRGWQRAAQAAAGTGNVDPSVLAALSDDLSFHRA
                     AVAIDVIARKANRGVDTAVECLAATLAFFGFSSDSLLRDAQVFDTSRVDDAVQARLTA
                     LNAKDFKRADEIRAALLAEGIQLMDSKTDAGERVTTWEIKR"
     gene            952..1317
                     /locus_tag="VHZ56_14210"
     CDS             952..1317
                     /locus_tag="VHZ56_14210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013532560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX4299170.1"
                     /translation="MTTTVDHIGVNVGNYDKSKNFYAAALKPLGLTILNDYGTVIGIG
                     ADFPFLWVSEGNAGHVHLAFRADSRKLVDDFYEAAIKAGAKDNGKPGLRTEYHQNYYA
                     AFVLDPDGHNLEAVCHNAP"
     gene            1307..>1752
                     /locus_tag="VHZ56_14215"
     CDS             1307..>1752
                     /locus_tag="VHZ56_14215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018427079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX4299171.1"
                     /translation="MPREPVTALTGGCQCGAVRFRAGDFGRSAICHCRMCQKAFGGFF
                     GPLVTVGELAWTRGAPKFFRSSNIARRGFCGDCGTPLCYVQDGGPFEMAIGAFDDPND
                     VAPAVQFNLRDRLAFFDALSSLPPQPHHDKELEYNSRVSSHQHPDR"
BASE COUNT          301 a          649 c          520 g          282 t
ORIGIN      
        1 cggcgaagtg ctgttcgacg tcggctcgat gcccgactac ggcgcgctct ccggccgcga
       61 cctcgacagc aacctcgccg gcgcccgcgt cgaggtcgac acccacaagc gcaaccccgc
      121 cgatttcgtg ctctggaaga gttcgtccgc caccgagccc ggctgggatt cgccctgggg
      181 ccgcggccgc cccggctggc acatcgagtg ctcggccatg agcgagcgct acctcggcaa
      241 ggtcttcgac atccacgccg gcggcctcga cctgatcttc ccgcaccacg agaacgagat
      301 cgcccagtcg cgctgtgccc atggcacgcc ggccatggcg cgcacctggc tgcacaatgg
      361 gttcctccag gtcgagggcc agaagatgtc gaagtcgctc ggcaacttca tcaccatccg
      421 cgagctgctg gagactggca aattcggcgg ccgccaatgg cccggcgaag tgctgcgcct
      481 cgccatgctg atgacgcact accgcgagcc gatcgatttc accgtcaagc gcctcgagga
      541 agccgagacc aagttgcgcg gctggcagcg cgctgcccag gcggccgccg gcacagggaa
      601 cgtcgacccc tccgtgctcg cagcgctgag cgacgatctg agcttccatc gtgccgccgt
      661 cgccatcgat gtcatcgccc gcaaggccaa ccgcggcgtc gataccgctg tcgaatgcct
      721 cgcggcgacg ctcgcctttt tcgggttcag cagcgacagc ctgctcaggg atgcgcaagt
      781 gttcgacacc tcgcgcgtcg acgatgccgt gcaggctcgt ctcaccgccc tcaacgccaa
      841 agacttcaag cgcgccgacg agatccgcgc cgccctcctg gccgagggca tccagcttat
      901 ggattccaaa accgacgccg gcgagcgcgt caccacatgg gagatcaagc gatgaccacc
      961 accgtcgacc acatcggcgt caacgtcggc aattacgaca agtcgaagaa tttctacgcc
     1021 gcggccctga agccgctcgg tctcaccatc ctcaacgact acggcaccgt catcggcatc
     1081 ggcgccgact tcccgttcct gtgggtgtcg gagggcaatg ccggccacgt ccacctggcg
     1141 ttccgcgccg acagccgcaa gctcgtcgat gacttctacg aggccgcgat caaggccggc
     1201 gccaaggaca acggcaagcc gggcctccgc accgaatacc accagaacta ctacgcggcc
     1261 ttcgtcctcg atcccgacgg ccacaacctc gaggccgttt gccacaatgc cccgtgagcc
     1321 cgtcaccgcg ctgaccggcg gctgccagtg cggcgcggtg cgctttcgcg ccggcgactt
     1381 cggccgctcc gcgatctgcc actgccgcat gtgccagaag gcattcggcg gcttcttcgg
     1441 cccgctggtc accgtcggcg aactggcgtg gacgcgcggc gccccaaaat tcttccgctc
     1501 gtccaacatt gcccggcgcg gcttttgcgg cgattgcgga acgccgctct gctacgtcca
     1561 ggacggtgga ccgttcgaga tggcgatcgg cgccttcgac gatcccaacg acgtcgctcc
     1621 ggccgtccag ttcaatctgc gggaccggct cgcgttcttc gatgcgctgt cctcgttgcc
     1681 gccgcagccc catcacgaca aggaactgga atacaattcc cgcgtcagca gtcaccagca
     1741 tcctgaccgc ga
//
LOCUS       DATAZA010000576         6363 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3360201, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000576 DATAZA010000000
VERSION     DATAZA010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6363
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3360201"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..723)
                     /locus_tag="VHZ56_14220"
     CDS             complement(<1..723)
                     /locus_tag="VHZ56_14220"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003532875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEX4299172.1"
                     /translation="MKLVTGNSNRALAGGVADYLELPLADCTVKRFADKEVYVEVHEN
                     VRGEDVFVLQSTSFPTNDNLMELLIIIDALRRSSARRITAVLPYFGYARQDRKSAPRT
                     PISAKLVANLITIAGANRVLTLDLHAAQIQGFFDIPTDNLTSAPVMVRDIREHYELSN
                     TMIVSPDVGGVVRARNVAQRLGTTLAIVDKRRPRAGVSEVMNIIGEVSGHDCILIDDI
                     VDSGGTLVNAAEALLKAGARNVS"
     gene            complement(814..1587)
                     /gene="pgeF"
                     /locus_tag="VHZ56_14225"
     CDS             complement(814..1587)
                     /gene="pgeF"
                     /locus_tag="VHZ56_14225"
                     /inference="COORDINATES: protein motif:HMM:NF014619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HEX4299173.1"
                     /translation="MSAPHVTSRVLADERLQHAFFGREGGRSQGDLASNNMSIAQGDN
                     PDFVISNRSSAANAMGGHGIRDLVVFRQVHSTRVVTLTDRPDPAVAVEADAMVTNRRD
                     LLLGILTADCSPVLLADPEAGIVAALHAGWKGAVGGIVGNTVAAMTALGADPARIRAA
                     IGPTISGANYEIGPDLAAQIIAENASVKPYVWVPNDATREHFDIPGLLQEQLFAAGVG
                     LVGDLDLCTYAHPAAYFSHRYATHHGTKAGRQIAVIGLR"
     gene            complement(1584..2657)
                     /locus_tag="VHZ56_14230"
     CDS             complement(1584..2657)
                     /locus_tag="VHZ56_14230"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEX4299174.1"
                     /translation="MPSLSLAEQIDAQIRATGPMSLATYMGLCLSHPRYGYYTAGRPI
                     GAAGDFITAPEISQMFGELIGFCLVNLWQQMGQPPSFTLLELGPGRGTLMQDALRAAG
                     KAEGFENALHLQLFEQNAILKGEQEKRLSRFAPYWAGELDALGPDPLLVVANEFFDAL
                     PVKQFVRTDDGWHERLVGLDGETRILGLSPTPIADSAAPPEVRGAYAGEVLELSPAAV
                     DTMQRLARRIAVQGGALLAIDYGYERTQTGETLQAVKSHAFADPLEAPGDADLSAHVN
                     FGVLGDAARAAGLAVAPLARQGEFLMRLGLGERARALARANPAEAANIARAVERLTAP
                     EQMGTLFKAFCAHSPGLKPAGFA"
     gene            complement(2650..3486)
                     /gene="lgt"
                     /locus_tag="VHZ56_14235"
     CDS             complement(2650..3486)
                     /gene="lgt"
                     /locus_tag="VHZ56_14235"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEX4299175.1"
                     /translation="MAPPGDSVPFPDISPIALQLGPFAIRWYALGYLAGVFLGAWYAT
                     TLLKRETLWAHDRPPFPAPAIWDFAFWSVIGIVLGGRTGYVLFYNLPYYMAHPADIIA
                     LWDGGMSFHGGLVGILIAMALFTRSRGGSILSAFDLLGAIGTIGIFLVRIANFINGEL
                     YGAPTTLPWAVVFPTDPEQLPRHPSQLYEAGLEGLLLFVVTFVGTRYLGWLKRPGLTG
                     GVFGVGYALGRILVEFVRLPDVQVGYLLGTGWLTMGQVLSVPVLLAGLGFIVFAMVRP
                     RA"
     gene            3573..3839
                     /locus_tag="VHZ56_14240"
     CDS             3573..3839
                     /locus_tag="VHZ56_14240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HEX4299176.1"
                     /translation="MAQSSRILDNVGRMMNDAAGVADGMRREVETMVRAQAERFVMDM
                     NLVKREDYDALRELVMTQSAELRALKAEVAALKGGGAGDASPKP"
     gene            3836..4558
                     /locus_tag="VHZ56_14245"
     CDS             3836..4558
                     /locus_tag="VHZ56_14245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012707589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HEX4299177.1"
                     /translation="MKLAIISDVHGNRLALEAVLDDIVRHGVDATFNLGDLVSGPLEP
                     NWAAEILMDLDIPTVRGNHERMLVDNPPEQLGPVDRFAQAQMEPRHRLWINDLPATLA
                     LLDDVFLCHGTPTSDDEPWLDAWWEGRTVTAPDEASVAAKAEGFDYPVLLCGHTHIPR
                     AVRLRDGRLIVNPGSVGLQLNHGSPDARYATIERRDGKYYPSFHAVPYDHFAAARQAE
                     ANGFPQWREALVSGWAGAGGLF"
     gene            4819..5322
                     /locus_tag="VHZ56_14250"
     CDS             4819..5322
                     /locus_tag="VHZ56_14250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjN domain-containing protein"
                     /protein_id="HEX4299178.1"
                     /translation="MAHLLELEPDRTIHPVDIIEHIAAINDWSFERQDTDEISISVRG
                     SWSDYHVSFNWMEDLESLHIASAFDLKVPEPRRAEVKQLIALVNEQLWIGHFDMWNHE
                     GVILFRNSHLLTGGADMTPQQCEALLRSATESCDLYYQAFQFVVWAGKPAAEALSSVL
                     FETVGEA"
     gene            5367..6191
                     /gene="proC"
                     /locus_tag="VHZ56_14255"
     CDS             5367..6191
                     /gene="proC"
                     /locus_tag="VHZ56_14255"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018067763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEX4299179.1"
                     /translation="MAERGLAGIGPVVLIGAGKMGLALARGWVAAGLPADRLVLVDPF
                     AGDAARSFASETGVRLVKTAAGILTHVMVMAVKPQTMAEAMRDVRGSVGRQTLVISIA
                     AGIALRTLSGGLGTERVIRAMPNTPAQIGKGITGAVGLNVTDADRALADGLLGAAGEV
                     VWFDVESKLDAVTAVSGSGPAYVFYMVEALAVAGMRQGLDPGQAMQLARQTVVGAAAL
                     MEADSQSVSILRENVTSPKGTTAAALAVLMAPDGLEALLDRAVLAARIRSEELGRG"
BASE COUNT         1037 a         1851 c         2526 g          949 t
ORIGIN      
        1 ggagacgttg cgcgcgccgg ccttgagcag ggcttcggcg gcgttcacca gcgtgccgcc
       61 ggaatcgacg atgtcgtcga tgaggatgca gtcgtggccg gagacctcgc cgatgatgtt
      121 catcacctcg gagacgccgg cccgcgggcg gcgcttgtcg acgatggcga gggtggtgcc
      181 gaggcgctgc gcgacgttgc gggcgcgcac cacgccaccg acatcgggcg agacgatcat
      241 ggtgttggac agttcgtaat gctcgcggat gtcgcgcacc atcaccgggg cggaggtgag
      301 attgtcggtg gggatgtcga agaagccctg gatctgggcg gcatggagat cgagcgtcag
      361 gacgcgattg gcgccggcga tggtgatgag gttggcgacg agcttggcgg agatcggcgt
      421 gcgcggcgcg gatttgcggt cctgccgggc gtagccgaaa tagggcagca cggcggtgat
      481 gcggcgggcc gaagagcggc gcagcgcatc gatgatgatg agcagctcca tcaggttgtc
      541 gttggtcggg aacgaggtcg actggaggac gaagacgtcc tcgccgcgga cgttttcgtg
      601 aacctcgaca tacacttcct tgtcggcgaa gcgcttgacg gtgcagtcgg cgagggggag
      661 ctcgaggtag tcggcgacac cgccggccaa ggcacggttc gagttgccgg tgaccagttt
      721 catggtgcgt gctctcgtgc ccttggactt ggcgggtgtt tatagcgcgg gggtccccgg
      781 cgcaatgcgg cacatgaccg ttgtgtaaac ggttcagcgc aggccgatga cggcgatctg
      841 ccggccggcc ttggtgccgt ggtgggtggc gtagcggtgg gagaaatagg ccgcggggtg
      901 ggcgtaggtg cacaaatcga ggtcgccgac gaggccgacg ccggcggcga acagctgctc
      961 ctggagcagg ccggggatat cgaaatgctc gcgggtcgca tcattgggga cccacacata
     1021 tggctttacg gacgcgtttt ccgcgatgat ctgcgctgcc agatcgggcc cgatctcgta
     1081 gttggcgccg gagatggtcg ggccgatggc ggcgcggatg cgggcggggt cggcgcccag
     1141 tgcggtcatg gcggcgacgg tattgccgac gatgccgccg acggcgccct tccagccggc
     1201 gtggagggcg gcgacgatgc cagcctcagg gtcggcgagc agcaccggcg agcagtcggc
     1261 ggtgaggatg ccgagcagca ggtcgcggcg gttggtgacc atggcgtcgg cctcgacggc
     1321 gacggcgggg tcgggccgat cggtcagggt aacgacgcgg gtcgagtgga cctggcggaa
     1381 gacgacgagg tcgcggatgc cgtggccgcc catggcattg gcggcgctgg agcggttgga
     1441 gatgacgaag tccgggttgt cgccctgggc gatcgacatg ttgttggagg cgaggtcgcc
     1501 ctgcgagcgg ccgccctcgc ggccgaagaa ggcgtgctgc agccgctcgt cggcgaggac
     1561 gcggctggtg acatgcgggg cgctcatgcg aaccccgcgg gcttgaggcc ggggctgtgg
     1621 gcgcagaagg ccttgaagag ggtgcccatc tgctcgggag cagtgaggcg ctcgacggcg
     1681 cgggcaatgt tggcggcttc ggcagggttg gcgcgggcca gggccctggc gcgctcgccg
     1741 agcccgagcc gcatcaggaa ctcgccctgc cgggcgagcg gggcgacggc aagcccggcg
     1801 gcgcgggcgg cgtcgccgag gacgccgaaa ttgacgtggg cggagaggtc ggcgtcgccg
     1861 ggggcttcga gcgggtcggc gaaggcgtgc gacttcaccg cctgcagggt ttcgccggtc
     1921 tgggtgcgct cgtagccata gtcgatggcg aggagggcgc cgccctgcac ggcgatgcgg
     1981 cgggcgaggc gctgcatggt gtcgacggcg gcgggcgaca gctcgagcac ctcgccggca
     2041 taggcgccgc gcacctcggg cggagcggcg gaatcggcga tgggggtggg cgagaggccg
     2101 aggatgcggg tttcgccgtc gaggccgacc aggcgctcgt gccagccgtc gtcggtgcgg
     2161 acgaactgct tgaccggcag ggcgtcgaag aactcgttgg cgacgacgag gaggggatcg
     2221 gggccgagcg cgtcgagttc gccggcccaa tagggggcga agcgggagag gcgtttttcc
     2281 tgctcgccct ttagaattgc gttctgttcg aacagctgca ggtggagggc gttttcgaac
     2341 ccctcggcct tgccggcggc acgcagggca tcctgcatca gggtgccgcg gccggggccg
     2401 agctcgagca gggtgaagct cggcggctgg cccatctgct gccagaggtt gacgaggcag
     2461 aagccgatga gctcgccgaa catctggctg atctcggggg cggtgatgaa gtcgcccgca
     2521 gcgccgatcg gccggcccgc ggtgtaatag ccgtagcgcg ggtgggagag gcagaggccc
     2581 atataggtgg ccagcgacat cggtccggtg gcgcggatct gcgcgtcgat ctgctcggcg
     2641 agcgagaggc taggcacggg ggcgcaccat ggcgaagacg atgaagccga ggccggccag
     2701 cagcaccggc acgctcagca cctggcccat ggtcagccag ccggtgccga gcaggtagcc
     2761 gacctgcacg tcgggcaggc ggacgaactc gacgaggatg cggccaaggg catagccgac
     2821 gccgaagacg ccgccggtga ggccgggacg cttgagccag ccgagatagc gggtgccgac
     2881 gaaggtgacg acaaagagca gcaggccctc gaggccggct tcatagagct ggctcgggtg
     2941 gcgcggcaac tgctcgggat cggtgggaaa gacgacggcc cagggcaggg tggtgggggc
     3001 gccgtagagc tcgccattga tgaagttggc gatgcggacg aggaagatgc cgatggtacc
     3061 gatggcgccc agcaggtcga aggccgaaag gatgctgccg ccgcgcgagc gggtgaacag
     3121 ggccatggcg atgagaatgc cgaccagtcc gccatggaag ctcatgccgc cgtcccacag
     3181 cgcgatgatg tcggcggggt gggccatgta gtagggcagg ttgtaaaaca gcacatagcc
     3241 ggtgcggccg cccaggacga tgccgatgac cgaccagaag gcgaagtccc agatggccgg
     3301 cgccggaaaa ggcggcctgt cgtgggccca cagggtctcg cgtttcagca gggtggtggc
     3361 gtaccaggcg ccgaggaaga cgccggcgag gtagccgagg gcataccagc ggatggcgaa
     3421 ggggccgagc tgcagggcga tcgggctgat gtcggggaac ggcacggagt cacctggcgg
     3481 agcgatgcga ccttgtaggc cacgggacgg actggtcaag ccgggcggcg ggccgtaaag
     3541 agggtcggca cggataccca aggaggccca ggatggccca gagcagccgg attctcgaca
     3601 atgtgggccg catgatgaac gacgcggcgg gcgtcgccga cgggatgcgc cgcgaggtgg
     3661 aaaccatggt gcgggcgcag gcggagcggt tcgtcatgga catgaacctg gtcaagcgcg
     3721 aggactatga cgcgctgcgc gagctggtga tgacgcagag cgccgaactg cgggcgctga
     3781 aggcggaggt cgcggcgctc aagggcggcg gcgccggaga cgcttcgccg aagccgtgaa
     3841 actcgccatc atctcggacg tgcacggcaa ccgcctcgcg ctcgaggcgg tgctggacga
     3901 tatcgtgcgg cacggcgtcg acgcgacgtt caacctcggc gacctggtga gcgggccgct
     3961 cgagcccaac tgggcggccg agatcctgat ggatctcgat atcccgacgg tgcgcggcaa
     4021 ccacgagcgc atgctggtcg acaatccgcc ggaacagctc ggcccggtcg accgcttcgc
     4081 gcaggcgcag atggagccgc ggcaccggct gtggatcaac gacctgccgg cgacgctggc
     4141 gctgctcgac gacgtgttcc tctgccacgg cacgccgacc tcggacgacg agccgtggct
     4201 cgacgcctgg tgggagggcc ggacggtgac ggcgccggac gaggcgagcg tcgcggcgaa
     4261 ggccgagggc ttcgactatc cggtgctgct gtgcgggcac acgcacatcc cgcgcgcggt
     4321 gcggctgagg gacgggcggc tgatcgtcaa tcccggcagc gtggggttgc agctcaacca
     4381 cggctcgccg gacgcgcgct acgccaccat cgagcggcgg gacggcaagt attatccgag
     4441 ctttcatgcc gtgccgtacg accatttcgc ggcggcgcgg caggcggagg ccaacggctt
     4501 tccacaatgg cgcgaggcgc tggtcagcgg ctgggccggg gcgggcgggc tgttctaggg
     4561 cgctgcggca gcggcgccgc caggtgcagg tgtcgcattg tgacactcaa ttcacaggcc
     4621 agcggggtgg cggttaagac cttcttaaca gtcaaggttc gatcatccac agaagaaagc
     4681 cgcgatgagc ccggcggggg attcccctca atcggcgcac tgcctaggtt gatgccaagg
     4741 cacgattcgt aggcgatccg cgtgcggcaa gttcctttga gtgcagcgtt ttccgtccac
     4801 gcttaccgcg ggaattccat ggcccacctt ctcgaactcg agcccgatcg caccatccat
     4861 ccggtcgaca tcatcgagca tattgcggcg atcaacgact ggagcttcga gcgccaggac
     4921 accgacgaga tctcgatctc ggtgcgcggc tcgtggagcg actaccacgt gtcgttcaac
     4981 tggatggagg acctcgagtc gctgcacatt gcgtcggcct tcgacctgaa ggtaccggag
     5041 ccgcggcggg ccgaggtgaa acagctgatc gcgctggtca acgagcagct gtggatcggc
     5101 catttcgaca tgtggaacca cgaaggggtg atcctgttcc gcaactcgca cctgctcacc
     5161 ggcggggcgg acatgacgcc gcaacaatgc gaggcgctgc tgcgctcggc gaccgagagc
     5221 tgcgacctct attaccaggc gttccagttc gtggtctggg cgggcaagcc ggccgccgag
     5281 gcgctgtcca gcgtgctgtt cgagaccgtc ggggaagcct gacttgagcg acagtttcgg
     5341 cccttccggg cgacagggtg gggcgcatgg ctgagcgtgg ccttgccggc atcggcccgg
     5401 tggtgctcat cggcgcgggc aagatggggc tggcgctggc gcgcggctgg gtcgcggcgg
     5461 gattgccggc cgaccggctg gtgctcgtcg atccgttcgc cggcgatgcg gcgcgcagct
     5521 ttgcatcgga gaccggggtg cggctggtca agaccgccgc gggcatcctc acgcatgtga
     5581 tggtgatggc ggtgaagccg cagaccatgg ccgaggcgat gcgcgacgtg cgcggctcgg
     5641 tggggcggca gacgctggtg atctcgatcg cggcggggat tgcgctgagg acgctgagcg
     5701 gcgggctggg caccgaacgg gtgatccggg cgatgccgaa cacgccggcg cagatcggca
     5761 aaggcatcac cggggcggtg gggctcaatg tcacggacgc cgaccgggcg ctggccgacg
     5821 gcctgttggg cgcggcgggc gaggtggtgt ggttcgacgt cgagagcaag ctcgatgcgg
     5881 tgaccgcggt gtccgggtcg ggaccggcct atgtgttcta catggtcgag gcgctggcgg
     5941 tggccgggat gcggcagggg ctcgatccgg gccaggcgat gcagctggca cggcagaccg
     6001 tggtgggggc ggcggcgctg atggaggcgg acagccagtc ggtgtcgatc ctgcgcgaga
     6061 acgtcacctc gcccaagggc acgacggcgg cggcgctggc ggtgctgatg gcgcccgacg
     6121 ggctcgaggc gctgctggac cgggcggtac tggcggcgcg catcaggtcg gaagagctgg
     6181 gacgcggctg aaggcggcgc gccgcgagta gaagggaact ctacttccca atcgccattc
     6241 acttattcgc tagatgtcgt cggtcagctt caggcggtcg agcaggggac ggtcgccggg
     6301 ctcgaccatg ccgacgaaga agttgaggac ggtgcgcttg ccttcggggg gcagcgtggc
     6361 gat
//
LOCUS       DATAZA010000577         2721 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_458037, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000577 DATAZA010000000
VERSION     DATAZA010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 2721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2721
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_458037"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(215..1645)
                     /gene="tig"
                     /locus_tag="VHZ56_14260"
     CDS             complement(215..1645)
                     /gene="tig"
                     /locus_tag="VHZ56_14260"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEX4299180.1"
                     /translation="MQVTETLNDGLKRKLSVVIPSTDLNSRLATRLGQLKDQANIKGF
                     RPGKVPATYLKKVYGKSAMAEVMQDAINSTVSETLTQRSERAAAQPKVDLPEDQGTLN
                     KVLDGEADLAFDVSYEVLPAVDIMEFKGLSLDRPVVEISDEEVEKELQRVFRQNRGYE
                     PKGDDATVGDGDNLGISFEGKIDGKGFSGGSSDHAHLIVGAGEFIPGFEEQLLGMKKG
                     DTRAVTVTFPADYQQASLQGKTAVFDVTVLHIDAPRAGEINDDFAKTLGLEGIDALKT
                     AIREQMGTALASMSRQALKRQILDALDEGHKFAVPEQLVDAEFESIWQRVKHEVEEHG
                     RTFEDEGTTEEEAREQYRRIAERRVRLGLVVAEVGNRNKVEVSEDEHQQALIAEVRRF
                     PGQEQQVYDYYRKNPAALAGLRAPVFENKVVDFIAELATQTDKPMSREALARLIQDEG
                     DELPDEHHHDHDHDHDYDHEGHDHDH"
     gene            complement(1701..1786)
                     /locus_tag="VHZ56_14265"
     tRNA            complement(1701..1786)
                     /locus_tag="VHZ56_14265"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1750..1752),aa:Leu,seq:tag)
     gene            2124..2462
                     /locus_tag="VHZ56_14270"
     CDS             2124..2462
                     /locus_tag="VHZ56_14270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018900556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEX4299181.1"
                     /translation="MKKIEAIVKPFKLDEVKEALQEVGLQGITVTEAKGFGRQKGHTE
                     LYRGAEYVVDFLPKVKIEVVCPDEFAEKAIEAIRTAAQTGRIGDGKIFVYSIEQAIRI
                     RTGEFGDDAL"
     gene            2506..>2721
                     /locus_tag="VHZ56_14275"
     CDS             2506..>2721
                     /locus_tag="VHZ56_14275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase beta-grasp
                     domain-containing protein"
                     /protein_id="HEX4299182.1"
                     /translation="MTTGNDILKKIKDEGIKYVDLRFTDPRGKLQHVTFDQTMIDEDI
                     FEEGTMFDGSSIAGWKAINESDMVLMPD"
BASE COUNT          441 a          890 c          875 g          515 t
ORIGIN      
        1 agttcatcct cgccgctgcg cagccacagg ccgccgcgcg ccgccagcgc cggcggcttg
       61 gtgatctccg gccagcccag caccccgcag tagaacgccc ggcactgcgc ctcgctgccg
      121 ggcgggatgg cgagctggac gtggtgcagg cgcatgctgg tctccagacg acaaggccgc
      181 ccggaggcgg cctttcgaaa cccggtgccc gacctcagtg gtcgtggtcg tggccctcgt
      241 gatcgtaatc atgatcgtgg tcgtgatcat ggtggtgctc gtccggcagt tcgtcgccct
      301 cgtcctggat cagccgggcg agtgcttcgc gcgacatcgg cttgtcggtc tgcgtggcga
      361 gctcggcgat gaagtcgacg accttgttct cgaacaccgg ggcgcgcagc ccggccagtg
      421 ccgccgggtt cttgcggtag tagtcgtaaa cctgctgctc ctgcccgggg aagcggcgga
      481 cctcggcgat cagcgcctgc tgatgctcgt cctcgctgac ctcgaccttg ttgcggttgc
      541 cgacctcggc caccaccagc ccgagccgta cacggcgctc ggcgatgcgg cgatactgct
      601 cgcgcgcctc ttcctcggtc gtgccctcgt cctcgaaggt ccggccgtgc tcttcgacct
      661 cgtgcttgac ccgctgccag atggactcga attcggcatc gaccagctgc tcgggaaccg
      721 cgaatttgtg gccctcgtcg agagcgtcga ggatctggcg cttgagcgcc tgccggctca
      781 tcgaggcgag tgccgtgccc atctgctcgc ggatcgcggt cttcagcgca tcgatcccct
      841 cgagcccgag cgtcttggcg aagtcgtcgt tgatctcgcc ggcgcgcggt gcatcgatgt
      901 gcagcaccgt cacgtcgaac accgccgttt tgccctgcag gctggcctgc tggtagtcgg
      961 ccgggaacgt gacggtcacc gcgcgggtgt cgcccttctt catgccgagc agctgctcct
     1021 cgaaaccggg gatgaattcg ccggccccga cgatcaggtg ggcatggtcc gaactgccgc
     1081 ccgaaaagcc cttgccgtcg atcttgccct cgaacgaaat ccccagattg tcgccgtcgc
     1141 cgaccgtcgc gtcgtcgccc ttgggctcgt agccgcgatt ctggcggaac acgcgctgca
     1201 gttccttttc gacttcctcg tcggaaatct cgaccaccgg ccggtcgagg ctgagcccct
     1261 tgaattccat gatatccacg gccggcagca cttcgtagct gacgtcgaag gccaggtcgg
     1321 cttcgccgtc gagcaccttg ttgagggtgc cctggtcctc gggcaggtcg accttgggct
     1381 gcgccgcggc ccgctcggag cgctgcgtca gcgtctccga caccgtcgag ttgatcgcgt
     1441 cctgcatcac ctcggccatc gccgacttgc catagacctt cttgaggtag gtcgcgggca
     1501 ccttgccggg gcggaagccc ttgatattgg cctggtcctt gagctggccg agccgcgtcg
     1561 cgaggcggct gttgaggtcg gtgctgggaa tgaccacgct cagcttgcgc ttcaggccgt
     1621 cattgagggt ttcggtgacc tgcattcagg gattccatct ctcttgtcgt tggccgtgcg
     1681 gcgcggtgcc ggttcggagc tggtgcgggt gagaggactt gaacctccac gccttttggg
     1741 cgctggaacc taaatccagt gcgtctacca gttccgccac acccgcgaac cgccctacgg
     1801 ccgggctggc gtgcagatat agcaagtgcc gcatggcgtc aaagcctgac tggaaggccg
     1861 gcgccgcggc ggaatcctgg tgagcccggg ggcggtgtcg cccattcctt ttgcagccgc
     1921 tcccgcgatg gctttttgct ttgaccgtcc agtatgcagt atgcacactc tttgtgcagc
     1981 ccagccgggg gccgccttcg atcccgcatc aggaggcgct gataaccggc tggcgaggtt
     2041 gtggttttga tcgtcgacac aacgctggca cgacccgtgc atgctgatcg gcgacacccg
     2101 cgagggcgta agtggaggcc tgaatgaaga agatcgaggc tatcgtaaag ccgttcaagc
     2161 tcgacgaggt caaggaggcg ctgcaggagg ttggcctgca ggggatcacc gtcaccgagg
     2221 ccaaaggctt cggccggcag aagggccaca ccgagctcta ccgcggcgcc gaatacgtgg
     2281 tcgacttcct gccgaaggtg aagatcgagg tggtgtgccc cgacgaattc gccgagaagg
     2341 cgatcgaggc catccgcacc gccgcgcaaa ccggccgcat cggcgacggc aagatcttcg
     2401 tctactcgat cgagcaggcg atccgcatcc gcaccggcga attcggcgac gacgcgctct
     2461 gacgcgccgc gcccaaaatc acacagactt tcaacgggga aaaccatgac gactggaaac
     2521 gacattctca agaagatcaa ggacgaaggg atcaagtacg tcgatctgcg cttcaccgac
     2581 ccgcgcggca agctgcagca cgtcaccttc gaccagacca tgatcgatga ggacatcttc
     2641 gaagaaggca cgatgttcga cggctcctcg atcgccggct ggaaggcgat caacgagtcc
     2701 gacatggtgc tgatgcccga t
//
LOCUS       DATAZA010000578         5283 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_458357, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000578 DATAZA010000000
VERSION     DATAZA010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5283
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_458357"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(366..836)
                     /locus_tag="VHZ56_14280"
     CDS             complement(366..836)
                     /locus_tag="VHZ56_14280"
                     /inference="COORDINATES: protein motif:HMM:NF014825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SEC-C metal-binding domain-containing protein"
                     /protein_id="HEX4299183.1"
                     /translation="MAKIGRNDLCPCNSGKKYKKCCMASDEAAARAARPAPPAAVPAR
                     RPSLPGYVQEHDELDELTEASNAVVDMVQSGNLDAAEQAARDLLARFPDVHDGYDRLG
                     MVCEARGDHRQAADCYRKAINVIRNHPDNYDPEFEAVFQRLVDRLETQAYAAAG"
     gene            868..1443
                     /locus_tag="VHZ56_14285"
     CDS             868..1443
                     /locus_tag="VHZ56_14285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299184.1"
                     /translation="MYQAVLADAKFHEQLLVFDRDLAASARAARCWLCGGALHSASYD
                     RKPRGCPGGLCQEYAKRFSFCCAVDGCRKRTTPPSLRFLGRHIYLATVVTLISALMLG
                     TTPSRLARLSVVPGLDRRTLARWRAWWRSTFSDGPVAAVARAAVATPIDIARLPASLL
                     DRFAGDVSEQLIALLRFLGPLTGGASAMHAF"
     gene            1555..2994
                     /locus_tag="VHZ56_14290"
     CDS             1555..2994
                     /locus_tag="VHZ56_14290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015256992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HEX4299185.1"
                     /translation="MHERWARLRFSIIGALLAAPPAKGALRAALAQLAAREWRHPSSG
                     APVRFSVSTLERWYYRSRNEQHDPLGVLRRKRRQDAGAQASMTPPLRQALLAQYAAHK
                     GWSAQLHHDNLVALAENRSELRPVPSYATVRRFLAAHGLTKHRPMTTRQTDGALAAAA
                     RLEAREVRSYESEYSGGLWHWDCHHGSRKVLTQRGEWRTPILFGVLDDRSRLACHLQW
                     YLSESAENIAHGLSQAMQKRGVPRAAMSDNGAAMTATEITEGLARLGIIHQTTLPYSP
                     YQNGKQEVLWGSVEGRLMAMLEGVDDLNLARLNEATQAWVEQDYNRKRHSEIDDTPLA
                     RFLAGPAVTRPCPDAAALRLAFTRTEQRTLRKSDGTAVIEGRRFEVPSRYRHLSVLEV
                     RFAAWDLTQVQLVDPYTGTVLCRLFPQDKAANASGLRRSVQPISAEPVTSPPPPARGI
                     GPLLARMIDRQAATGLPPAYLPKDEGDDA"
     gene            2991..3836
                     /locus_tag="VHZ56_14295"
     CDS             2991..3836
                     /locus_tag="VHZ56_14295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008651548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX4299186.1"
                     /translation="MNNNMLALYGLKWNPFAPNVPTEALHVTPRLESFCWRVQQLAGE
                     GGFALVTGTPGCGKSGALRILSASLATQRDVTVGVISRPQANIADFYREMGELFGVEL
                     RPHNRYGGAKILRQRWQAHIQSTLSRPVLVVDEAQEMQSAVLAELRLLASADLDSNIL
                     LTTVLAGDGRLAERLRADEFLPLASRMRVRLPIERATPQDLQDCLRHALQQAGAPTLM
                     TPEVIATICDHALGNLRALMIMAGELLAAAAQREARQIDETLFFETCGVPAANETKAA
                     IRRRR"
     gene            3833..4786
                     /locus_tag="VHZ56_14300"
     CDS             3833..4786
                     /locus_tag="VHZ56_14300"
                     /inference="COORDINATES: protein motif:HMM:NF024872.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX4299187.1"
                     /translation="MSQLPVQPAWRLADCPEQQRWLVDGLWSEEAVGIIGGEPKCCKS
                     FLALDLAVAVAAGTPCLRRFAVGRPGRVLLYPAEDALHIVRRRIEGICAAAGIGLAAL
                     DVQVITAPCLRLDLDADRARLDETVARLKPRLLVLDPFVRLHRIDENVSGDVAPLLAF
                     LRDLQRRHAVAVAVVHHARKGAGAIRAGQALRGSSEFHAWGDSNLYLRRDSDDRIVLT
                     VEHRAAAAMPSVTLELAQRDHSLALQPVQADPLPDSRVEPISVDQRITAALADAGKPR
                     PFSELRASCRVRTTTLYERLAAMTAAGLIVKSADGYCLAVP"
     gene            complement(4985..>5283)
                     /locus_tag="VHZ56_14305"
     CDS             complement(4985..>5283)
                     /locus_tag="VHZ56_14305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299188.1"
                     /translation="FEAALASSDREKARDALRRYLFAAQELPCDGSLSDAIVVISRRP
                     AGRGAAAALVLRALSVPGVVHTSAANLTRSVVELVEGALPELSELVGVDAKQQN"
BASE COUNT          817 a         1846 c         1717 g          903 t
ORIGIN      
        1 cagtgtcgcg gccgatcatt cggcagagac agggttcgga ctctcagcgg cagccgcgac
       61 gatcgcgttg cgcttgcgca gactgggtcc tgagcctgag cacggaaggg gatgtgttat
      121 cggcgttttc tgatcaggga atttgagggt ttgcgggtca cgtccctcgc ggatcttggc
      181 gggtccatgg ggtcgttcct tcgggtcatt ccttggtgag actgcaggac cattcctcgg
      241 cgccgacctg cgctcctgac cgccgggagc gcaggcgggg tcaaggaggc tccgcgccgc
      301 aggcgtggat gccttgacgc cgccgcgcac ccggcgaggc tggagcagcg ggcgggccgg
      361 caggctcagc cggcggcggc atacgcctgg gtttcgagcc ggtcgacgag cctttggaag
      421 acggcctcga actcgggatc gtagttgtcg gggtggttgc ggatgacatt gatggctttg
      481 cggtagcagt cggcggcttg gcgatggtcg ccgcgggctt cgcagaccat gccgaggcgg
      541 tcgtagccgt catgaacatc ggggaagcgc gcgagcaagt cgcgggcggc ctgttcggcg
      601 gcatcgagat tgccggactg gaccatgtcg accaccgcat tggacgcctc ggtcagttca
      661 tcgagttcgt cgtgttcctg gacatagccg ggcaaagacg gccggcgcgc cggcaccgcg
      721 gcgggcggag cgggacgtgc ggcgcgggcg gcggcctcgt cactggccat gcagcacttc
      781 ttgtatttct tgccgctgtt gcaggggcag agatcattcc gtccgatttt ggccatctcg
      841 ccaacttcag ttcaaaggac ggacccagtg taccaagccg tgctggccga cgccaagttc
      901 catgagcagt tgctcgtctt cgaccgcgac cttgcggcct ctgcccgggc agcgcggtgc
      961 tggctctgcg gtggcgcgct gcattcggca tcgtatgacc gcaagccgcg cggctgccca
     1021 ggtgggttat gtcaagagta tgccaagcgc ttcagcttct gctgcgcggt ggatggctgc
     1081 cgcaagcgca ccaccccgcc gtcgctgcgc tttctgggtc gtcacatcta cctcgccacc
     1141 gtggtgacgt tgatctcggc gctgatgctc ggcaccacgc cgtcgcgctt ggcgcgtctg
     1201 tcggttgtgc ccggacttga tcggcggacg ttggcgcgtt ggcgcgcctg gtggcggtcc
     1261 accttctccg acggccccgt cgcggcggtc gccagggctg cggtggcgac accaatcgac
     1321 atcgcccgcc tgccagcctc gctgctcgat cgctttgctg gcgacgtgag cgagcaactc
     1381 atcgccttgc tgcgcttcct cggtccgctg accggcggcg catcggcgat gcacgctttc
     1441 tgatgggcgt caccgacccg caaaggatgc gcgtcgccgc ccctcggtga ggacgcttac
     1501 cgtcggttcg ctcattttcg gagggcgggc gtggcggagc gagacggatc gcgggtgcat
     1561 gagcgttggg cgcgactgcg cttctcgatt atcggtgcgc ttctggcggc gccgccggcg
     1621 aagggcgcgt tgcgtgcggc actggcgcaa ctggcggcgc gcgaatggcg ccacccgagc
     1681 agcggcgcgc cggtccgctt cagcgtctcc accttggagc gctggtatta tcgcagtcgg
     1741 aacgagcagc atgatccgct cggcgtgctg cgacgcaagc ggcgccagga tgccggtgcg
     1801 caggcatcga tgaccccacc gctgcgccag gcgctgctgg cccagtatgc cgctcacaaa
     1861 ggctggagtg cccagttgca tcacgacaac ctggtcgcct tggccgagaa caggtccgag
     1921 ttgcggccgg tgccgtccta cgcgacggtc cggcggttcc tggccgccca cggtctgacg
     1981 aagcatcgac cgatgacgac gcgccagacc gatggcgcgc tggccgccgc agcgcggctc
     2041 gaggcacgcg aggtgcgcag ctatgaatct gagtattccg gcgggctctg gcattgggac
     2101 tgtcatcacg gttccagaaa ggtgctgacg caacgcggcg aatggcgaac gccgatcctg
     2161 ttcggcgtgc tcgacgaccg ctcgcggctg gcctgtcatc tgcaatggta cctgtcggaa
     2221 tcagccgaga acatagccca cggcttgtcg caggcgatgc aaaagcgcgg cgtgccgcgc
     2281 gctgccatga gcgacaacgg cgccgcaatg acggcaaccg agatcaccga aggtctcgcc
     2341 aggctcggca tcattcatca aaccacgttg ccgtattcgc cctatcagaa cggcaagcag
     2401 gaggtcctct ggggatcggt cgagggccgg ctgatggcca tgctcgaggg cgtcgacgat
     2461 ctcaacctgg cccggctcaa cgaggcgacg caggcctggg tggagcagga ctataaccgc
     2521 aagcggcaca gcgagatcga cgacaccccg cttgcccgct tcctcgccgg tcccgccgtg
     2581 acgcgacctt gcccggatgc cgcagcgctg cggctggcct tcacccgcac cgagcagcgc
     2641 accctgcgca agagcgatgg caccgccgtc atcgaaggtc gccgcttcga agtccccagc
     2701 cgttatcgac atctttccgt gctggaagtc cgcttcgccg cctgggatct cacgcaggtc
     2761 cagctcgtcg atccgtacac cggcacggtg ctttgccggc tgttcccgca ggacaaggct
     2821 gccaacgcct ccggcctgcg ccgcagcgtg cagccgatct cggccgagcc tgttacgtca
     2881 ccaccaccgc cggcgcgcgg catcggaccg ctgctggcga gaatgatcga ccggcaggca
     2941 gcgaccgggc tgccgcccgc ctacctcccg aaggacgaag gagacgatgc gtgaacaaca
     3001 acatgctggc gttgtacggc ctcaaatgga acccgttcgc ccccaacgtg ccgaccgagg
     3061 cgttgcatgt caccccacgc ctggaatcat tctgctggcg ggtgcagcag ctcgctggtg
     3121 aaggcggctt cgccctggtc accggtacgc ccggctgtgg caaatccggc gccctgcgca
     3181 tcctgtccgc atcactggcg acacagcgcg acgtgacggt cggcgtgatc agtcggccgc
     3241 aggccaacat cgcagacttc tatcgcgaga tgggtgaact cttcggcgtc gaactccgcc
     3301 cgcataaccg ctacggcggt gccaagatcc tgcgccaacg ctggcaggcg catatccaaa
     3361 gcactctgag caggccggtt ctggtggtcg atgaggcaca agagatgcag tccgccgtgc
     3421 tcgccgaatt gcggctgctg gcgtctgccg atctcgactc caacatcctg ctgaccaccg
     3481 tgctggcggg tgacgggcgg ctcgccgagc gtttgcgcgc cgatgagttc ctgcctcttg
     3541 ccagtcgcat gcgggtgcgc ctgccgatcg aacgcgccac gccgcaggac ctccaggact
     3601 gtctccgcca cgccctgcag caggccggcg cgcccaccct gatgaccccg gaggtgatcg
     3661 cgaccatctg cgatcatgcc ctgggcaatc tgcgggcgct gatgatcatg gcgggcgagc
     3721 ttctcgccgc cgccgcccag cgggaggccc gtcagatcga cgagacactg ttcttcgaga
     3781 cctgcggcgt gcccgcggcg aacgagacca aagcggcgat ccggcgccgg cgatgagcca
     3841 gcttccggtc cagccggcct ggcgcctcgc cgactgcccc gagcagcagc gctggctcgt
     3901 cgacgggctg tggtcggaag aggccgtcgg catcatcggc ggcgagccca agtgctgcaa
     3961 atccttcctc gccctcgatc tggccgttgc cgtcgctgcc ggcaccccct gcctgcgccg
     4021 cttcgcggtg ggccgccccg gccgcgtcct gctctatccc gccgaagacg ctctgcacat
     4081 cgtccgtcgc cgcatcgagg gtatctgtgc cgccgccggc attggcctcg ccgcgctcga
     4141 cgtccaggtg atcaccgccc cctgcctgcg cctcgatctc gacgccgacc gcgcccgcct
     4201 cgacgagacc gtcgcccggc tgaagccacg gctgctcgtg ctcgacccgt tcgtgcgcct
     4261 gcaccgcatc gatgaaaacg tcagcggcga tgtcgcgccg ctgctcgcct tcctgcgtga
     4321 cctacagcgc cgccatgccg tcgccgtcgc ggtcgtccac catgccagga agggggctgg
     4381 cgccatccgc gccggccagg ccctgcgcgg atcgtccgaa ttccacgcct ggggtgattc
     4441 caacctctat ctccgccgcg acagtgacga tcgcatcgtg ctgaccgtcg aacatcgcgc
     4501 cgccgccgcc atgcccagtg tgacgctcga actggcccag cgtgatcact ctctcgcctt
     4561 gcagcccgtc caggccgatc ccctacccga cagccgcgtc gagccgatct ccgtggatca
     4621 gcgcatcacc gcggctctcg ccgacgctgg caaaccgcgg ccgttctccg aactgcgcgc
     4681 atcctgccgc gtccgaacca ccactctcta cgagcgcctc gccgcgatga ccgcagccgg
     4741 cctcatcgtc aaatcagccg acggatactg cctcgccgtt ccctgatcgc tcccccagac
     4801 aggccagcct tgcgccctgc cgcggcgatc ctccacatca gatcccatca aacttgtccg
     4861 ggcagcgctg cgcgccggcc acttcccgct tccgcttccc gtaccctcta cagaacgcgg
     4921 gaagcggaag tgggaagtcc atcgaattcc gcgatcagag aaccatcaaa caacgtgatc
     4981 gtgctcagtt ctgctgcttg gcgtcgacgc ctacgagctc cgacagctct ggcagagcgc
     5041 cctcaaccag ttcaaccacc gagcgcgtca ggttggcggc gctggtgtga acaacgcccg
     5101 ggaccgacag cgcccttagt accagggccg cggccgcgcc tcgccccgcg ggacgtctgg
     5161 aaatcacaac gatggcgtca gataacgacc catcgcacgg cagctcttga gcggcgaata
     5221 ggtagcggcg cagcgcgtcg cgcgcttttt cgcgatcgct cgacgcaagc gcggcctcaa
     5281 acg
//
LOCUS       DATAZA010000579         3739 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3593118, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000579 DATAZA010000000
VERSION     DATAZA010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3739
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3593118"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..590
                     /locus_tag="VHZ56_14310"
     CDS             <1..590
                     /locus_tag="VHZ56_14310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX4299189.1"
                     /translation="LIVVFSALLPGERLKWQHVAGCILAFAGAIFVVTGGNGLSLDPQ
                     FIPGYIAALFAAVVWGAYSVLSRRFAHVPSDAITGFCLVTCVLAAIVHVAIEPTVWPT
                     NFGQWAAIVGLGLGPVGLAFYVWDIGVKHGDIQVLGAASYAAPLLSTAILVLTGYAAY
                     STALLFACLLITAGAILAASDLLFRRTAPRALDVP"
     gene            complement(587..1426)
                     /locus_tag="VHZ56_14315"
     CDS             complement(587..1426)
                     /locus_tag="VHZ56_14315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX4299190.1"
                     /translation="MPDVPTLTLNDGKTIPQLGLGVWQVDPEITARVVTDGIRAGYRL
                     IDTAEGYHNEEGVGEAIRTAGVPRSELFITSKLRNGGHDRDSALRSFDDSMKKLGLDQ
                     MDLFLIHWPVPSQGKYVTAWKTLVELREQGRVRSIGVANFNPDHLERIIRETGVTPVV
                     DQIELHPYLQQRGIRDFLTQHGIHIESYSPLGTGTLLKDKTVSAIGQKHGKSAAQTII
                     RWHLQQGLIVIPKSTHAERQQSNFNVFDFTLSDDEMKQLAGLDKGDAGRTGSDPATAS
                     FLF"
     gene            1659..2930
                     /locus_tag="VHZ56_14320"
     CDS             1659..2930
                     /locus_tag="VHZ56_14320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299191.1"
                     /translation="MRIVALAFGILAGLIASLILALGGLDVSAAVATPAGRQVALIRF
                     GLFVIASLGTFGAGLVLASPVAGAVIMLVGAAAWVGASLLFHHTTDLALVTPPVLLLV
                     AAIIAIIAHFRRPRGRDAEFSRDGRDFAPPPRARNEDFDELPSTPVSAGFLGSGAGVA
                     YRAEPERQSQQPARGFDDRAQVRDLPDDEEWEPRRRRQPPPRQKLNFRAPDDDEDESA
                     FSGFARSSSGILSFGLYACLAGAALLIFWNLHNGEAGHPAAAKVEASSAVSSIAVSPP
                     AAARAQLRLQPNTPAAPELPSSSAGVVPTVPMLAAASSAEAVAPGPPPLASPGEFQDM
                     AGVVVADPGAAAPVTSDNAAVAPQQATSADAASEPADTDPASAAAPDLGSTGSTVAPV
                     MPYPMPPAIAAGRSRRAPAAEPPSASADTGL"
     gene            2973..3278
                     /gene="clpS"
                     /locus_tag="VHZ56_14325"
     CDS             2973..3278
                     /gene="clpS"
                     /locus_tag="VHZ56_14325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013893445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HEX4299192.1"
                     /translation="MPDLDTKPRTRTRVQTKRPPLYKVILVNDDFTPRDFVVRILKAE
                     FRMSEDQANRVMITAHTKGVCVVAVFTREIAEDKATRAIDMARNEGFPLLFTTEPES"
     gene            complement(3282..>3739)
                     /locus_tag="VHZ56_14330"
     CDS             complement(3282..>3739)
                     /locus_tag="VHZ56_14330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299193.1"
                     /translation="LQTVYLACYLGDRLFGPDEMRAILQKAAVDTSVSVEQGRLFFRN
                     TPDPEHGKERHPAYRGYRPELLDPVVVAHQIACQWSGADEKARLRMTLVAEDCVKRFV
                     SFAQLEVGRSRTVSADAGRKGEGETLPALMGRLSVGRIEKLKANGRQTL"
BASE COUNT          515 a         1362 c         1182 g          680 t
ORIGIN      
        1 tgctgatcgt ggtgttctcg gccctgctgc cgggcgagcg gctgaaatgg cagcacgtcg
       61 ccggctgcat tctcgctttc gccggggcta tcttcgtggt caccggcggc aacggcctca
      121 gcctcgaccc gcaattcatc cccggctaca tcgccgccct ctttgctgcc gtcgtctggg
      181 gcgcctattc ggtgctgtcg cgccgcttcg cccacgtgcc gagcgacgcc atcaccggtt
      241 tctgcctggt cacctgcgtg ctcgctgcaa tcgtccacgt cgctatcgag ccgacggtgt
      301 ggccgacgaa tttcggccag tgggccgcca tcgtcggcct cgggctggga cctgtcggac
      361 tcgcgttcta cgtgtgggac attggcgtca agcacggcga catccaggtg ctgggcgccg
      421 cttcctatgc cgcgccactg ctgtcgacag ccatcctggt gctgaccggc tacgccgcct
      481 acagcaccgc gctgctcttc gcctgcctgc tgatcacggc tggggcaatc ctcgccgcca
      541 gcgacctgct gttccggcga accgcgccgc gcgccctgga tgttccctag aacaggaagc
      601 tggcggttgc cgggtccgac ccggtccgcc ccgcgtcgcc cttgtcgagt ccggcgagct
      661 gcttcatctc gtcgtcgctg agcgtgaaat cgaagacgtt gaaattgctc tgctgccgct
      721 cggcatgggt actcttggga atgacgatca ggccctgctg caggtgccag cggatgatcg
      781 tctgcgccgc cgatttcccg tgcttttggc cgatcgccga gacggttttg tccttcagca
      841 gcgtgccggt gccgagcggg ctgtagcttt cgatgtggat cccatgctgc gtaaggaagt
      901 cgcggatgcc gcgctgctgc aaatagggat gcagctcgat ctggtcgacg accggggtca
      961 cgcccgtctc gcgaatgatc cgctccagat ggtcgggatt gaaattggcc acgccgatcg
     1021 agcgcacccg gccctgctcc cggagctcga cgagcgtctt ccaggccgtg acgtacttgc
     1081 cctggctggg caccggccaa tggatcagga agaggtccat ctggtcgagc ccgagcttct
     1141 tcatgctgtc gtcgaaactg cgcagtgccg agtcgcggtc gtggccgccg ttccgcagct
     1201 tgctggtgat gaagagctcg ctgcgcggca cccccgccgt ccggatcgcc tcgcccacgc
     1261 cttcttcgtt gtgatagccc tcggcggtgt cgatcagccg gtagccggcc cggatgccgt
     1321 ccgtgaccac ccgcgcggtg atctcgggat cgacctgcca gacccccagg ccaagctgtg
     1381 gaatcgtctt gccgtcattg agggtgaggg tcggcacgtc cggcatgagc tgttcctttt
     1441 cgcagggctg ttcatcgctg ccgggcagaa cctccgggag ggcaggaagg ttcattttct
     1501 tcccggccgc cctcatcatg tcagggcttc tccttgtttt ccccggctcg gctgctattt
     1561 tgcgccagat tttgccgcta attgcatgat agcggagaac aaattcggtg cggagcttgg
     1621 ggctccgcgg acgggtttgg cacagccgga gcgaattctt gcgcattgtc gccctagcct
     1681 tcggtatcct ggccggactc atcgcctcgc tcatcctggc gctgggcggc ctcgacgtca
     1741 gcgccgcggt ggcaacgccg gccggccgcc aggtggcact catccgcttc gggctgttcg
     1801 tgatcgccag cctcggcacg ttcggcgccg gcctcgtgct ggcctcgccc gtcgccggag
     1861 ccgtgatcat gctggtgggg gcggcagcat gggtcggcgc ctcgctgctg ttccaccaca
     1921 ccaccgacct tgccctggtg acgccgccgg tcctgctgct cgtcgccgcc atcatcgcga
     1981 tcatcgccca ttttcgccgt ccccgcggcc gcgacgccga gttctcgcgc gacggccgcg
     2041 acttcgctcc gccgccgcgc gcccgcaacg aggatttcga cgaactcccc tcgaccccgg
     2101 tgagcgccgg cttcctggga tcgggcgcgg gcgtcgctta ccgtgccgaa cccgagcgcc
     2161 agagccagca gccggcgcgt ggcttcgacg accgcgccca ggtgcgcgat ctcccggacg
     2221 atgaggaatg ggaaccgcgg cggcgccggc agccgccacc ccgccagaag ctcaattttc
     2281 gcgccccgga cgacgacgag gacgagtcgg ccttttccgg ctttgcccgc tcctccagcg
     2341 gcatcctgag cttcgggctt tatgcctgcc tcgcgggcgc ggcgctgctg atcttctgga
     2401 acctgcataa tggcgaggcc ggccacccgg ccgcggccaa agtcgaggcg tcgtccgccg
     2461 tttccagcat tgccgtatcg ccgcctgccg ctgcccgggc gcaactccgg ctgcaaccca
     2521 acacgccggc ggcgcccgag ctgccctcgt catcggccgg ggtcgtgccc acggttccca
     2581 tgctcgccgc ggcgagttcg gccgaagcgg tcgcgccggg accgcccccg ctggcctccc
     2641 cgggggaatt ccaggacatg gccggcgtcg tcgtcgccga tccgggtgca gcggcgcccg
     2701 tcacctcgga caatgccgcg gtcgccccgc agcaggcgac gtccgccgac gccgcctccg
     2761 agccggccga taccgacccg gcttcggccg cagctcccga tttagggtca accggctcga
     2821 ccgttgcccc cgtgatgccc tatccgatgc ctccggcgat cgccgccgga cgcagccgcc
     2881 gggcccccgc cgccgagcca ccttccgctt ccgccgacac cgggctctga gccagcggcc
     2941 ggacgtgcta tgctggcgcc ggagacattt cgatgccgga tctcgatacc aagccgcgaa
     3001 cacgcacccg cgtccagacc aagcgcccgc cgctctacaa ggtcatcctc gtcaacgacg
     3061 acttcacgcc gcgcgacttc gtcgtgcgca tcctcaaggc cgagttccgc atgagcgagg
     3121 accaggccaa tcgtgtcatg atcaccgctc acaccaaggg cgtctgcgtt gtcgccgtgt
     3181 tcacccgcga gatcgccgaa gacaaggcca cccgggcgat cgacatggcg cgcaacgaag
     3241 gctttccgct gctttttacc accgagcccg aaagctgagc ctcagagcgt ctgccggccg
     3301 ttggccttga gtttctcgat gcggccgacg ctgagccggc ccatcagcgc cggcagcgtc
     3361 tcgccctcgc ccttgcgccc ggcatcggcg gaaaccgtcc ggctgcgccc gacttcgagc
     3421 tgcgcgaacg acacgaaccg cttcacgcag tcctcggcga ccagcgtcat ccgcagccgc
     3481 gctttctcgt cggcaccgga ccactggcag gcgatctggt gcgccaccac gaccgggtcc
     3541 agcagctccg gccggtagcc gcgataggcc gggtgccgct ccttgccatg ctcggggtcc
     3601 ggcgtgttgc ggaaaaacag gcggccctgc tccaccgaca ccgaggtatc cacggccgcc
     3661 ttctgcagga tcgcgcgcat ttcgtcgggc ccgaacagcc ggtcgccaag atagcaggcg
     3721 agatacaccg tctgcagga
//
LOCUS       DATAZA010000580         5081 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_4056270, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000580 DATAZA010000000
VERSION     DATAZA010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5081
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4056270"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(100..1284)
                     /locus_tag="VHZ56_14335"
     CDS             complement(100..1284)
                     /locus_tag="VHZ56_14335"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX4299194.1"
                     /translation="MASQSTGVQPIVVPQSLAYVLNNAGDKSGVDFNYLVNTAMRESS
                     MNPDAKAPSSSAVGLFQFLDTTWLQVMKEEGPRLGYQQYADAITQNADGTYTIADKKL
                     RTQVLALRENPQVAADMAAAFTASNGAYLQSKFGRMPSPGELYIAHFLGPQGAEKMFD
                     AGLQDPDQVAAKLFPAAAKANPEIFYANGQPRTIRQVYKALVAQHDGIVAAPLPADPD
                     PKFVTQQIAAGPAAKWTDQELPSRFTKADMSFTALFATQAPTGTPQPLIADTVQPSPL
                     VIDTPPPGLAPAATSGLAAVTALQSPAATPAPLAAIDAATAPSGSIVPLPAPAPLSAP
                     LALMDPPPDAGAPEAAAQPVQLLPPDDGPPATPGVPRARVLMTPGVTPNNAFFTQLVG
                     NQ"
     gene            complement(1339..1917)
                     /locus_tag="VHZ56_14340"
     CDS             complement(1339..1917)
                     /locus_tag="VHZ56_14340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HEX4299195.1"
                     /translation="MPAIPALRDYLKTRRSVGIGFLRDPGPSPAELDEILTIGTRVPD
                     HGKVVPWRLVVIEGEARQQAGDRLAAIQKSRRPDLDEASLELERRQFLPAPVTVGVIV
                     SPRPNPKSPEIEQLLSAGNVCFNLSHAAFALGYAASWTNRWYGFDPEAQQMLGARGGE
                     RFVGFVHIGTPVSLPEDRDRPDLNKVVTRWQG"
     gene            2016..3032
                     /locus_tag="VHZ56_14345"
     CDS             2016..3032
                     /locus_tag="VHZ56_14345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299196.1"
                     /translation="MKFWRFLVVLAAAMALPALAQDDSAPSPAPLPAFQSPVASGEDG
                     AVPPANDSTQPAPASADDAGAAPASPPPATAKATAKAATTVPQPVLLTASITDGGQPI
                     GGGLVWRVFGTKPDHSGQLPLEARSTDAAAQLSLAPGDYVVDVAYGHAQASDTLSVKE
                     GKNDMAMVLNAGALRLNASVSGDVPIPINLLHFDIFTSGASDADRAVVAQNLGANDII
                     TLNAGTYHVVSYFGDVNAIVRADLKVEPGQLTDATLYHKAAQVSFKLVSETGGEAIAD
                     VDWTVKTADGTTVFTNTGTFPSTVLEAGDYLILGKRGDKVYNRNFEVQAGQPKEIEVL
                     TTVY"
     gene            3122..4882
                     /locus_tag="VHZ56_14350"
     CDS             3122..4882
                     /locus_tag="VHZ56_14350"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX4299197.1"
                     /translation="MAQPDRKLVPIVSLDVVGYSRLAEINERQTLRLVQRVYDRLVAR
                     TIGRHGGKVFKTMGDGLLAEFQSVVAAVEWVAEVQQELNQRRLKVPGGGHFQVRAGIV
                     LADVLIAGDDLYGSGVNLSVRVQAMSPPGGMAITKWMHQYLDGRSDLQFTDLGPLELK
                     NVSKTVRIHVWHPDGVVHRPPGEAPAAPPSTRPSVVVLPFDNLSGEADQSYFADAVVE
                     EITATLSRIRDFFVIARNSAFSYKGRSPDVRQVGRELGVRYAVEGSVRRVGERVRITA
                     QLVETESGNHIWSTRVDGLVTDLFDLQDKVAAEVASALHPSIRRAEVERARSKRPETL
                     AAYDFVMRALPHLWAHRMAENPQAISYLTKALALEPGYGLAAALAGWAHGQQVVYNWS
                     TDIAADRREGERLVEIATQTVGDDPTALTALASAIMQLGGDVRHALGLADKALALDPN
                     HAWGWMRRGFGLVYVGRPEEALPAFDKSARLSPLDPFGFNVHLGMGLACFAAGRLEAA
                     IELAQQSLAERPGLTWPYRDLAAYYAAAGRMDEARDALAKFVYLRPAMTAASIRDGLR
                     FMEPGLLDRYIGGLQAAGLD"
BASE COUNT          748 a         1714 c         1793 g          826 t
ORIGIN      
        1 gaagtcctga taggcgacca ttccgctctc cggcagaccc gcagagaccc tagccagcaa
       61 ggcttaagga acggttcacc ctgttcgttg aggaggcgtt tactggttgc cgaccagctg
      121 ggtgaagaac gcattgttgg gggtgacgcc gggcgtcatc agcacgcgtg cccgcggcac
      181 tccgggtgtg gcaggaggcc cgtcgtcggg cggcagcaac tgcaccggct gcgccgccgc
      241 ttcgggggcg ccggcgtcgg gcggcgggtc catcagcgcc agcggcgcgc tgaggggtgc
      301 cggcgccggc agcggcacga tcgacccgga tggcgccgtc gcggcgtcga tcgcagcgag
      361 cggcgccggc gtcgctgccg ggctctgcaa cgccgtcact gcggcaaggc cggacgtcgc
      421 cgccggcgcg agtccggggg gcggcgtgtc gatcaccagc ggcgagggct gcacggtatc
      481 cgcaatcagc ggctgcggcg taccggtggg cgcctgcgtc gcgaacagcg cggtgaacga
      541 catgtcggcc ttggtgaagc gcgacggcag ttcctggtcg gtccatttcg cggccgggcc
      601 ggcggcgatc tgctgggtca cgaatttcgg atctgggtcg gccggcaatg gcgccgcgac
      661 gataccgtca tgctgggcga cgagcgcctt gtagacctgc cggatcgtcc gcggctggcc
      721 gttcgcgtag aagatctcgg ggttggcctt ggccgcggcc ggaaacagct tggcggcgac
      781 ctggtcgggg tcctgcagcc ccgcgtcgaa catcttttcg gcgccctgcg gcccgaggaa
      841 gtgggcgatg tagagttcgc ccgggctcgg catgcggccg aacttcgatt gcaggtaggc
      901 gccattcgag gcggtgaacg cggccgccat gtcggcggcg acctgcgggt tctcgcgcag
      961 cgccagcacc tgggtgcgca gcttcttgtc ggcgatggtg taggtgccgt cggcgttctg
     1021 ggtgatggcg tcggcgtatt gctggtagcc cagccgcggg ccctcctcct tcatcacctg
     1081 cagccaggtg gtgtcgagga actggaacag ccccaccgcc gacgaactcg gcgccttggc
     1141 gtcggggttc atgctcgatt cgcgcatcgc cgtgttgacg agataattga agtcgacgcc
     1201 gctcttgtcg ccggcgttgt tgagcacgta ggcgaggctt tgtggaacga cgatcggctg
     1261 gacgcctgtg ctctgcgatg ccatggcgat tccgggagcg gtccggttaa ccacgcgcta
     1321 acactggtta acggatggtt aaccctgcca gcgtgtcacc accttgttga ggtccggacg
     1381 gtcgcggtcc tccggcagcg acaccggcgt gccgatgtgg acgaagccga cgaaccgctc
     1441 gccgccccgg gcgcccagca tctgctgcgc ttccgggtcg aagccgtacc agcggttggt
     1501 ccagctcgcc gcatagccga gggcaaaggc ggcatggctg aggttgaagc agacattgcc
     1561 ggccgacagc aattgctcga tctcgggcga tttcggattg ggtcggggcg agacgatgac
     1621 gcccacggtc accggcgcgg gcaggaactg ccgccgctcc agctcgagcg aagcctcgtc
     1681 gaggtccggc cggcgcgatt tctggatcgc cgcaagcctg tcgccggcct gctgccgcgc
     1741 ctcgccctcg atcaccacca gccgccacgg cacgaccttg ccgtggtccg ggacgcgggt
     1801 gccgatggtc aggatttcgt cgagctccgc cgggctcgga ccggggtcgc ggagaaagcc
     1861 gatgccgacg gaacggcggg tcttgagata gtcgcggaga gcgggaatgg caggcatggt
     1921 cggtccttgc gggtggggag tccttatgac acagcttttc cccaatccaa gggtagccgt
     1981 gcgggctcgc tacggattgg gttgagggcg gcagcttgaa gttctggcgg ttcctggtgg
     2041 tgctcgcggc ggccatggcc ttgcccgctt tggcgcagga cgacagcgcg ccgagccccg
     2101 cgccgctgcc ggccttccag tcgccggtcg cctcgggcga ggacggcgcg gtgccgccgg
     2161 ccaacgattc cacgcagccg gctcccgcct cggcggacga tgccggagcc gccccggcct
     2221 ccccgccgcc agcaaccgcg aaggctacgg ccaaggccgc gaccaccgtg ccgcagccgg
     2281 tgctgctcac tgcctcgatc accgatggcg gccagccgat cggcggcggg ctggtctggc
     2341 gggtgttcgg caccaagccc gaccacagcg gccagctgcc gctcgaggcc cgctcgaccg
     2401 atgcagccgc ccagctcagc ctcgcgccgg gcgactacgt ggtcgacgtc gcctacggcc
     2461 atgcgcaggc gagcgacacc ctcagcgtca aggagggcaa gaacgacatg gcgatggtgc
     2521 tcaatgccgg cgcgctgcgg ctcaacgcct cggtcagcgg cgacgtgccg atcccgatca
     2581 acctgctgca tttcgacatc ttcacgtccg gggcgtccga cgccgaccgc gccgtggtgg
     2641 cgcagaacct cggcgccaac gacatcatca cgctcaacgc cggcacctac cacgtggtgt
     2701 cgtatttcgg cgacgtgaac gccatcgtcc gcgccgacct caaggtcgag ccgggccagc
     2761 tcaccgacgc cacgctctac cacaaggcag cgcaggtctc gttcaagctg gtgagcgaga
     2821 ccggcggcga ggcgatcgcc gatgtcgact ggacggtcaa gactgccgac ggcacgacgg
     2881 tgttcaccaa caccggcacc ttcccctcga cggtgctgga ggcgggcgac tacctcatcc
     2941 tcggcaagcg cggcgacaag gtctacaatc gcaacttcga agttcaggcc ggccagccga
     3001 aggaaatcga agtcctgacg acggtttact agcgccggcg ccgctgcatt tttccggccg
     3061 tgttgatggc gtcggccgca atgctataag cggccgaatt ccggccgggg ggcggacatc
     3121 gatggcgcaa ccggaccgca agctggtccc gatcgtctcg ctggatgtgg tcggttactc
     3181 gcgtctggcc gagatcaacg aacggcagac cctgcggctg gtgcagcggg tctacgaccg
     3241 gctggttgcg cgcaccatcg gccggcacgg cggcaaggtg ttcaagacca tgggcgatgg
     3301 cctcctggcc gagttccaga gcgtcgtggc ggcggtcgag tgggtggcgg aagtccagca
     3361 ggagctcaac cagcgccggc tgaaggtgcc cgggggtggc catttccagg ttcgcgccgg
     3421 gatcgtgctc gccgacgttt tgatcgccgg cgacgacctc tacggttcgg gtgtcaatct
     3481 ctcggtgcgg gtgcaggcga tgtcgccgcc gggcggcatg gcgatcacca aatggatgca
     3541 ccagtatctc gacggccgct ccgacctgca gttcaccgat ctgggcccgc tcgaactcaa
     3601 gaacgtctcc aagaccgtcc gaatccatgt ctggcatccg gacggcgtcg tgcaccggcc
     3661 gccgggcgag gcgccggcgg cgccgccctc gacccgcccg tcggtggtgg tgctgccgtt
     3721 cgacaatctg tcgggcgagg cggaccagag ctatttcgcc gatgcggtgg tcgaggagat
     3781 cacggccacc ctgtcgcgca tccgcgactt cttcgtcatc gcccgcaact cggcgttttc
     3841 ctacaagggc cgctcgcccg acgtgcggca ggtgggtcgc gagctcggcg tgcgctacgc
     3901 cgtcgagggc agcgtccggc gcgtcggcga gcgggtccgc atcaccgcgc agctggtcga
     3961 gaccgagagc ggcaaccaca tctggtcgac ccgcgtcgac ggcctcgtta ccgatctctt
     4021 cgacctccag gacaaggtcg cggccgaggt cgcgagcgcc ctccatccct cgatccggcg
     4081 cgccgaggtc gagcgcgccc gctcgaagcg cccggagacg ctcgccgcct acgacttcgt
     4141 gatgcgcgcc ctgccccacc tctgggcgca caggatggcg gaaaatccgc aggccatctc
     4201 ctatctcacc aaggccctgg cgctcgagcc gggctacggc ctcgctgcag cgctggcggg
     4261 ctgggcgcac ggccagcagg tcgtctataa ctggtcgacc gacatcgcgg ccgaccggcg
     4321 cgagggcgag cggctggtcg agatcgcgac gcagacggtg ggcgacgatc ccaccgcgct
     4381 caccgccctc gcctccgcca tcatgcagct gggcggcgac gtgcggcatg cgctggggct
     4441 ggccgacaag gcgctggcgc tcgaccccaa ccatgcctgg ggctggatgc gccgcggctt
     4501 cgggctggtc tatgtcggtc gcccggaaga ggcgcttccg gcgttcgata agtcggcgcg
     4561 gctgtcgccg ctcgatccgt tcggcttcaa cgtgcatctt gggatggggc ttgcctgctt
     4621 tgccgcgggc cggctggagg ccgccatcga gctggcgcag cagtcgctgg ccgagcggcc
     4681 cgggctgacc tggccgtatc gcgaccttgc ggcttattac gccgccgccg gccggatgga
     4741 cgaggcccgc gacgcgctgg cgaaattcgt ctacctgcgg ccggcgatga ccgcggcctc
     4801 gatccgcgac gggctgcgct tcatggagcc cggcctgctc gaccgctaca tcgggggact
     4861 gcaggcggcc ggcctcgact gagggttaac cgccggttgt cggcgcgcgc gcgatttgca
     4921 ccctggtctt gccggctttt caagccggcc tgccgatgat cgaaagattg tcgatcgcga
     4981 ggatttgcct tggacctccg gctggaaaag cggctttcgc cgcgccgcca caccatgatc
     5041 atcgcgacca tcgtgttcga cgccggccag agccgcgtcg a
//
LOCUS       DATAZA010000581         6443 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_3941926, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000581 DATAZA010000000
VERSION     DATAZA010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 6443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6443
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3941926"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(11..1015)
                     /locus_tag="VHZ56_14355"
     CDS             complement(11..1015)
                     /locus_tag="VHZ56_14355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="nutrient deprivation-induced protein"
                     /protein_id="HEX4299198.1"
                     /translation="MSNLNGKTSADLEREVDEQRGRVEARIGAIKERLSPGQLIDEAL
                     SYTKSGGAQFASTLGQQISANPLPAALVGVGLAWLISTSVGSSGTPQPRAVEDDTDYP
                     YGRASSLRRTSHAADESGQWWSEFETDSGDTFRAKATEQGQRAGHFVDATGRKFGGFI
                     DDTGQRVRRFQDEAGNMLDSASGWANHGWSEARRGVGEQFRNAADTASQIGDSVVSGT
                     RDLGGTMQTQADRLTSQLTTLFDRQPLIAGALAFAAGAALGAALPHTEQEDALLGEEA
                     DKIRDQTAEAAGSLYGQGKEQIADAYAKVSDAAAEVYDTARDQASRAVDGREARPSNT
                     "
     gene            complement(1015..1434)
                     /locus_tag="VHZ56_14360"
     CDS             complement(1015..1434)
                     /locus_tag="VHZ56_14360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018517755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HEX4299199.1"
                     /translation="MASSTDHAGGLADLLGGLASDISGLFRKEIQLAKTEASEKLDTV
                     MQAGRALAIGGVLAIGAIGVFLAALVAGLAALLVHMGMGPATANFVAAIVITVIVGGI
                     AWAMIARGLAQIKTSNLNMNRTAQSLQMDAAAVRENI"
     gene            complement(1434..2039)
                     /locus_tag="VHZ56_14365"
     CDS             complement(1434..2039)
                     /locus_tag="VHZ56_14365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299200.1"
                     /translation="MPTSRSTSGLSTPRTDAPAVPDAQTLRTDASAALGEAQDVAGKI
                     AGEASQQLSDLTGKAREQVQATTEKVKGMAGEQKDLLVTQVDGVANAASRVAGDLEQQ
                     HNPGAVYARYVADNAGKLRDQIRDKDVDELLAVAQDFGRKQPAAFVGVAALAGFAASR
                     FLMASARRTSSSTTSSTGSSPDASAAPGQWSGNTSLGSGRN"
     gene            2460..3716
                     /gene="urtA"
                     /locus_tag="VHZ56_14370"
     CDS             2460..3716
                     /gene="urtA"
                     /locus_tag="VHZ56_14370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033219 - urea binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter substrate-binding protein"
                     /protein_id="HEX4299201.1"
                     /translation="MTMGALAPAIADDTIKVGILHSLSGTMAGSETILKDTMLFLIDQ
                     QNKKGGLLGKKLEPVVVDPASDWPTFAEKARELISQDHVAAVFGCWTSSSRKSVLPVF
                     KELNSILFYPVQWEGEESEKNVIYTGASPNQQAIPAVDYLMSDDGGAVKRWVLEGTDY
                     VYPRTTNKILEQYLLDHGVSKDDIMINYTPFGFSDWQTEVSKIKAFGSAGKKTAVVST
                     INGDANTPFYKELANQGIKAEDIPVVAFSVGEEELSGLDTGPLVGHLAAWNYFESVDT
                     PENKQFIADWKAYMKNDKVVTNDPMEAAYLGFNLWVKAVEKAGTTDTDTVLKDIVGLS
                     VPNLSGGTATVLPDHELTKPVLIGEVQANGQFDVVWKTDKDVPGDAWSDALPEDKGIT
                     ADWTDPIKGCGHFDTATNTCTTAPSP"
     gene            3783..5399
                     /gene="urtB"
                     /locus_tag="VHZ56_14375"
     CDS             3783..5399
                     /gene="urtB"
                     /locus_tag="VHZ56_14375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009449911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtB"
                     /protein_id="HEX4299202.1"
                     /translation="MATRLLRLIAFLLACFVLAGPALAQTADFQKLVDALGPGSFAQH
                     EKAIDALVATGDQRVAAILQALSDGNLYTRKSDSRVVLADKAGDGFALTDPVDGAKLG
                     QATDDDIDKIKVNNALRGKLRTAVGQLTLMSTDRAARLSAAQSVLRTADPATLDLLKK
                     ALAAETDPQVKSVMELAEAVIVLKTDASLDEKRAAVATVTAHGDRDALSVLTGALDAA
                     PAELKPAIQAGIESINRQLELWDIAQNLVYGVSLASVLLLAAIGLAITFGVMGVINMA
                     HGEMVMLGAYVTYVVQQLFGAYAPDLMDWSLAVAIPAAFLFTGLVGICIERSIIRWLY
                     GRPLETLLATWGLSLILQQAVRALFTANNRPIINPSWMSGEIDFGGLAITLNRLWIIV
                     FGILVFAALQLVLNRTPLGLQMRAVTQNRRMASAMGIRTPFVDAMTFGLGSGVAGLAG
                     VALSQIDNVAPGMGQNYIVDSFMVVVFGGVGNLWGTLIGAVTLGVGNKFLEPFSGAVL
                     AKIIILVLIILFIQRRPRGLFALKGRAVEQ"
     gene            5410..>6443
                     /gene="urtC"
                     /locus_tag="VHZ56_14380"
     CDS             5410..>6443
                     /gene="urtC"
                     /locus_tag="VHZ56_14380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010976303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtC"
                     /protein_id="HEX4299203.1"
                     /translation="MITQLVLRAMDGRSAWVVSILLLLALAVPFSSLMLPETSPLHMP
                     DYMVPLFGKYLTYAMLALALDLVWGYCGILSLGHSAFFALGGYAMGMYLMRQIGARGI
                     YGNPILPDFMVFLNYKSLPWFWYGFDNFWFAMLMVVLVPGALAFVFGFLAFRSRVTGV
                     YLSIITQAMTYALLLAFFRNDLGFGGNNGLTDYKDILGFSISALSTRSALFAATAIAL
                     ALAVLVCSAIVNSKLGKVMIATRDAESRTRFLGYRVDNVKLFAFVVSAVIAGIAGALF
                     VPQVGIINPGEFAPANSIEVVIWTAVGGRGTLVGPIIGGLLVNLGKTVFTSLLPDYWL
                     YALGALFILVT"
BASE COUNT         1015 a         2285 c         1996 g         1147 t
ORIGIN      
        1 cggatgacga tcaggtgttc gatggtcttg cctcccggcc atcgacggcg cgcgaggcct
       61 ggtccctcgc tgtgtcgtag acctcggccg ctgcgtccga gactttcgcg taggcgtcgg
      121 cgatctgctc cttgccctgc ccgtaaagcg agccggcggc ctcggccgtc tggtcgcgga
      181 tcttgtccgc ttcttcgccc agcagcgcat cttcctgctc ggtgtgcggc agtgccgcgc
      241 ccagcgctgc cccggccgcg aacgccagcg cgccggcgat cagcggttgc cggtcgaaga
      301 gcgtcgtcag ctgcgacgtc agccggtcgg cctgcgtctg catggtaccg ccgaggtccc
      361 gtgtccccga gacgacgctg tcgccgatct gtgacgctgt gtcggccgca ttgcggaact
      421 gctctcccac gccgcggcgc gcctcgctcc agccgtggtt tgcccagccg gaggcgctgt
      481 ccagcatgtt gcccgcttcg tcctggaagc ggcgcacgcg ctggccggtg tcgtcgatga
      541 agccgccgaa cttcctgccg gtggcgtcga cgaaatgtcc ggcgcgctgg ccctgctctg
      601 tcgccttggc acggaacgtg tcgccgctgt cggtctcgaa ctcgctccac cactggccgg
      661 actcgtcggc cgcgtgcgag gtgcgccgca acgacgacgc ccggccatag ggatagtcgg
      721 tgtcatcctc caccgcccgc ggctgcggcg tgccggacga tccgacgctg gtgctgatca
      781 gccatgccag ccccacgccg accagcgccg ccggcagcgg attggccgaa atctgctggc
      841 cgagagtgct ggcaaactgc gcgccgccac tcttggtata gctcagcgct tcgtcgatga
      901 gctggccggg ggacagccgc tccttgatgg ccccgatgcg ggcctcgacg cgaccacgct
      961 gctcgtcgac ctcgcgctcg agatccgccg aggtcttgcc attgagattg ctcatcagat
     1021 gttctcccga acggccgccg catccatctg gagcgactgc gcggttctgt tcatgttgag
     1081 attgctggtt ttgatctgcg cgaggccgcg cgcgatcatc gcccaggcga tgccgccgac
     1141 gatcaccgtg atgacgatcg cggcgacgaa attcgccgtc gccggcccca tgcccatgtg
     1201 cacgaggagc gccgccaggc cggcgacgag ggcggcgagg aagaccccga tcgctccgat
     1261 cgccagcacc ccgccgatgg cgagcgcgcg gcccgcctgc atcacggtgt cgagcttttc
     1321 ggaggcctcg gttttggcca gctggatttc cttgcggaac agcccggaga tgtcggaggc
     1381 gaggccgccg agcagatcgg caagcccgcc cgcgtggtcg gttgagctgg ccatcagttc
     1441 ctcccagagc ccagggacgt attgccggac cactggccgg gcgccgcact ggcgtccggg
     1501 ctgctgccgg tgctgctcgt ggtgctgctg ctggtgcggc gggccgaggc catcaggaac
     1561 cggctggcag cgaatccggc cagggctgca accccgacga aggccgccgg ctgcttgcgg
     1621 ccaaaatcct gggccacggc aagcagttca tccacgtcct tgtcgcggat ctgatcgcgc
     1681 agcttgccgg cgttgtcggc gacataccgg gcgtacacgg ctccgggatt gtgctgctgc
     1741 tcgagatcgc ccgccacgcg cgacgcggcg ttcgccacgc cgtccacctg cgtgaccagc
     1801 aggtccttct gctcgccggc catgcccttg accttctcgg tcgtcgcctg cacctgctcc
     1861 ctcgccttcc cggtgagatc ggacagctgc tggctggctt cgccggcaat cttgccggcc
     1921 acgtcctgtg cctcaccgag cgcggcgctg gcgtcggtgc gcagcgtttg cgcgtcgggc
     1981 accgccgggg cgtcggtccg cggtgtgctc aaacctgatg ttgatcgtga tgtcggcatc
     2041 tgttcctccg cctgtgcaat gtggagaagg aaagtgccgg cagggcgaac agttccgcgc
     2101 cgtcggcccg catctgcgtc gcacatgtca aagtataatc cgatgcgcga agccgccgcc
     2161 gccatccgac gcgaccgccc gaaacgcgcc tccgcctaat taatgcgcag acatgcggaa
     2221 agccgaatct ttcatcacat tgctccggga gatgccgcgg aatccggcag ggcgccgccg
     2281 agcctttgcc ttccaacgct gtcccgatgc tgataacgca gcatccccaa tagcttaacg
     2341 aaaagtaaag ggtctggcac gtggtttgca ccaccccctc cggtgcaaac aaccaactgt
     2401 cggaggcaca attgacagga gtaaaccgct tggtagcggg gctcgcgctc ggcgcggcca
     2461 tgaccatggg agcgctcgcg cccgcgatcg cagacgacac catcaaggtg ggcattcttc
     2521 attcgctgtc gggaacgatg gccgggtccg agaccatcct caaggacacc atgctgttcc
     2581 tcatcgacca gcagaacaag aagggcggcc tcctcggcaa gaagctcgaa ccggtggtgg
     2641 tcgatccggc ctccgactgg ccgaccttcg ccgaaaaggc ccgcgaactg atcagccagg
     2701 accacgtggc tgcagtgttc ggctgctgga cctcgtcgtc acgcaaatcc gtgctgccgg
     2761 tgttcaagga actcaactcg atcctgttct atcccgtgca gtgggaaggc gaggaatccg
     2821 agaagaacgt gatctatacc ggcgcctcgc ccaaccagca ggccattccc gccgtcgact
     2881 acctgatgag cgatgacggc ggcgcggtga agcgctgggt gctggaaggc accgactacg
     2941 tctatccgcg cacgaccaac aagatcctcg agcaatacct gctcgatcat ggcgtctcca
     3001 aggacgacat catgatcaac tacaccccgt tcggcttctc cgactggcag accgaagtct
     3061 ccaagatcaa ggccttcggg tccgccggca agaagaccgc ggtggtctcg accatcaacg
     3121 gtgacgccaa tacgccgttc tacaaggaac tcgccaacca gggcatcaag gccgaggaca
     3181 tcccggtcgt tgcgttctcg gtgggcgaag aggagctgag cggcctcgac accggcccgc
     3241 tcgtcggcca cctcgccgcc tggaactact tcgagtcggt cgatacgccc gagaacaagc
     3301 agttcatcgc cgactggaag gcgtacatga agaacgacaa ggtggtgacc aacgacccga
     3361 tggaagccgc ctatctcggc ttcaacctgt gggtgaaggc ggtcgagaag gccggcacca
     3421 ccgataccga cacggttctc aaggacatcg tcggcctgtc ggttccgaac ctctcgggcg
     3481 gtaccgccac ggtgcttccc gatcacgagc tgaccaagcc ggtgctgatc ggcgaagtcc
     3541 aggccaacgg ccagttcgac gtcgtctgga agaccgacaa ggacgtcccc ggcgacgcct
     3601 ggtcggacgc gcttcccgag gacaagggca tcaccgccga ctggaccgat ccgatcaagg
     3661 gctgcggcca cttcgacacg gccaccaaca cctgcaccac ggcgccctcg ccgtaacggc
     3721 aagacaatcc ctgcgggggc gcgacggcgc ccccgcttct ccccgaccac tgagcgagca
     3781 cgatggccac ccgcctgctt cgactgatcg ctttcctgct cgcttgcttc gtcctcgccg
     3841 ggccggccct ggcgcagacc gccgacttcc agaagctggt ggacgcgctc ggtccgggca
     3901 gctttgccca gcacgaaaaa gccatcgacg cgctcgtggc aaccggcgac cagcgggtcg
     3961 cggcgatcct ccaggcgctc tccgacggca acctctacac ccgcaaatcc gactcccggg
     4021 tcgtcctcgc cgacaaggcc ggcgacggct tcgcgctcac cgatccggtc gacggcgcca
     4081 agctcggcca ggccaccgac gacgacatcg acaagatcaa ggtcaacaat gccctgcgcg
     4141 gcaagctcag gaccgccgtc ggccagctga cgctgatgag caccgaccgc gccgcgcgcc
     4201 tctccgccgc ccagtcggtc ctcaggaccg ccgatccggc gaccctcgat ctcctgaaga
     4261 aggcgctcgc cgccgagacc gatccgcagg tcaagtcggt gatggagctg gccgaggccg
     4321 tcatcgtcct caagaccgat gcctcgctcg acgaaaagcg cgcggcggtg gccaccgtca
     4381 ccgcgcatgg cgaccgcgac gcgctcagcg tcctcaccgg cgcgctcgat gccgcaccgg
     4441 ccgagctgaa gcccgccatc caggcgggca tcgaatcgat caaccgccag ctcgagctct
     4501 gggacatcgc gcagaacctc gtctacggcg tctcccttgc ttcggtgctg ctgctggcgg
     4561 ccatcggcct cgccatcacc ttcggggtga tgggcgtcat caacatggcg cacggcgaaa
     4621 tggtgatgct gggcgcctac gtgacctatg tcgtccagca actgttcggc gcctatgccc
     4681 ccgacctgat ggactggtcg ctggccgtgg cgatcccggc cgccttcctc tttaccggcc
     4741 tcgtcggcat ctgcatcgag cgcagcatca tccgctggct ctacggccgg ccgcttgaga
     4801 cgctgctcgc cacctggggc ctgtcgctga tcctgcagca ggcggtgcgc gccctcttca
     4861 ccgccaacaa ccggccgatc atcaacccga gctggatgtc gggcgagatc gatttcggcg
     4921 gcctcgccat caccctcaac cggctgtgga tcatcgtctt cggcatcctc gtcttcgcgg
     4981 cgctgcaact ggtgctcaac cgcacgccgc tcggcctgca gatgcgggcc gtcacgcaga
     5041 accgccgcat ggcctcggcg atgggcatcc gcacgccgtt cgtcgacgcc atgaccttcg
     5101 gcctcggttc gggcgtcgcc ggcctcgccg gagtggcgct gagccagatc gacaatgtcg
     5161 ctcccggcat gggccagaac tacatcgtcg acagcttcat ggtcgtggtg ttcggcggcg
     5221 tcggcaacct ctggggcacg ctcatcggcg ccgtcacgct gggcgtcggt aacaagttcc
     5281 tcgagccgtt ctccggcgcc gtgctcgcca agatcatcat cctggtgctg atcatcctgt
     5341 tcatccagcg gcgcccgcgc ggcctgttcg cgctcaaggg ccgggcggtc gagcaatgag
     5401 gatacggtct tgatcaccca gctcgtgctt cgcgccatgg acggccgctc cgcctgggtg
     5461 gtctcgatcc tcctgctgct ggcgctggcg gtgccgttca gcagcctcat gctgcccgag
     5521 accagcccgc tgcacatgcc cgactacatg gtaccgctgt tcggcaagta tctgacctac
     5581 gccatgctgg cgctcgcgct cgacctggtg tggggctatt gcggcatcct gtcgctcggg
     5641 cactcggcct tcttcgcgct cggcggctat gccatgggca tgtacctgat gcgccagatc
     5701 ggcgcccgcg gcatctacgg caacccgatc ctccctgact tcatggtgtt cctcaactac
     5761 aagtcactgc cctggttctg gtacggcttc gacaatttct ggttcgccat gctgatggtc
     5821 gtgctggtgc ccggcgcgct ggccttcgtc ttcggcttcc tggcgttccg cagccgcgtc
     5881 accggcgtct atctgtcgat catcacccag gcgatgacct acgccctgct gctcgccttc
     5941 ttccgcaacg atctcggctt cggcggcaac aacggcctca ccgactacaa ggacatcctc
     6001 ggcttttcga tctcggcgct gtcgacccgc tcggcgctgt tcgcggccac cgccatcgcc
     6061 ctcgcgctcg ccgtgctggt ctgctcggcg atcgtcaatt ccaagctcgg caaggtgatg
     6121 atcgccaccc gcgacgccga aagccgcacg cgcttcctcg gttatcgcgt cgacaatgtg
     6181 aagctcttcg ccttcgtcgt ctcggcggtg atcgccggca tcgccggggc gctgttcgtg
     6241 ccgcaggtcg gcatcatcaa ccccggcgag ttcgcgccgg ccaattcgat cgaggtggtg
     6301 atctggacgg ccgtcggcgg ccgcggcacc ctcgtcgggc cgatcatcgg cgggctgctg
     6361 gtcaacctcg gcaagacggt cttcaccagc ctcctccccg actactggct ctacgcgctc
     6421 ggggcgctgt tcatcctcgt gac
//
LOCUS       DATAZA010000582         3693 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_1737818, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000582 DATAZA010000000
VERSION     DATAZA010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3693
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1737818"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..864)
                     /locus_tag="VHZ56_14385"
     CDS             complement(61..864)
                     /locus_tag="VHZ56_14385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299204.1"
                     /translation="MGRRAAKFWHAMSSVAAGVLYFFFVLPRWPELMGDTSHALGTAA
                     RIIVGVVIALAALPVVFTLLELRKPEFGTPALALTLRTWSVVAHVVAGVLIVGTAISE
                     IWLNLDSVGQWLFGIYGAAAAIAVLGIFTFYLSFVAELPPPPPKPLKAKKEKKQRRRG
                     NTDDEAADSADADEEDYDEAADADDEAEIAEDGDDPKDDDAEDSPEVESAAVEAESTA
                     EEAPATAPAVEDADDTVADDSAGGLRNRRPTGKVSHRRRRSRRGVAVDE"
     gene            complement(939..1024)
                     /locus_tag="VHZ56_14390"
     tRNA            complement(939..1024)
                     /locus_tag="VHZ56_14390"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(988..990),aa:Ser,seq:gga)
     gene            1140..1234
                     /gene="ffs"
                     /locus_tag="VHZ56_14395"
     ncRNA           1140..1234
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VHZ56_14395"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            1272..2561
                     /locus_tag="VHZ56_14400"
     CDS             1272..2561
                     /locus_tag="VHZ56_14400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX4299205.1"
                     /translation="MVSYGSFSSLGRTDLEALHARHQQDYAELQSKKLALDLTRGKPC
                     REQLDLSNALLSLPGSDYRDGEGTDTRNYGGQHGLPELRAIFGELLGIPVQNLIAGNN
                     ASLELMHDVIMFSMLHGGVDSPRPWKDEPEVKFLCPVPGYDRHFAITETLGIEMIPIP
                     MREDGPDVDLIEELAAVDPAIKGLWAVPVFANPTGLSYSWESVRRLVQMQTAANDFRL
                     FWDNAYAVHTLTLDFPRPIDVLGLAAAAGNPNRPYVFASTSKITFAGAGVSFFGGSLG
                     NIAWYLQYAGKKSIGPDKINQLRHLRFFGDADGVRLQMLRHQQLLAPKFALALEILDK
                     RLSESKIASWNEPEGGYFISLDVLPGTARRTVALAKDAGIAVTEAGASFPYRKDPDDK
                     NIRIAPTFPPASDLNNAIDGLATCALLAASESLLNRD"
     gene            2594..>3693
                     /locus_tag="VHZ56_14405"
     CDS             2594..>3693
                     /locus_tag="VHZ56_14405"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF005846.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunits gamma/tau"
                     /protein_id="HEX4299206.1"
                     /translation="MALYRKYRPATFAEVVGQEHVTEPLSTALTAGRINHAYLFSGPR
                     GCGKTSSARILARSLNCEQGPTATPCGVCDSCIGLAPNGPGSIDVVELDAASHGGVDD
                     TRELRDRAFYAPAQSRYRVFIVDEAHMVTTAGFNALLKIVEEPPDHLIFIFATTEPEK
                     VLPTIRSRTHHYPFRLLPPRTMRGLIERICAQEDVVVDDAVYPLVIRAGGGSPRDTLS
                     VLDQLLAGAEGNRVTYQRALGLLGATDVALIDEAVDALGAGDAAALFGAVESVIDAGH
                     DPRRFATDLLERFRDLLVLQAIPDATSRGVVDAPEDVLERMREQATRIGRATLTRYAE
                     VVHAGLTEMRGATAPRLLLEVICARLLLPSAS"
BASE COUNT          618 a         1248 c         1202 g          625 t
ORIGIN      
        1 ctcggcaaca tcggcgcggt cagccggctg atcgacagct ggctggattc gaccgccggc
       61 tcattcgtcg acggcgacgc cgcggcgcga acgccgacgc cgatgtgaca cttttccggt
      121 cggccgccga ttgcgtaggc ctcccgccga atcgtcggca acggtgtcgt ctgcgtcctc
      181 gacggcgggc gcggtggcag gggcctcttc ggccgtcgac tcggcttcca cggcagccga
      241 ctcgacctcg ggactgtctt cggcgtcgtc gtctttaggg tcgtcgccat cttcggcgat
      301 ctcggcttcg tcgtcagcgt cagcggcctc gtcgtagtct tcttcgtcag catccgcgct
      361 gtctgcggct tcgtcgtccg tgttgccgcg gcgccgttgc ttcttctctt tcttggcctt
      421 cagcggtttc ggcggaggcg gcggcagctc ggcgacgaac gataagtaga aggtgaagat
      481 gccgagcacc gcgatcgcgg ccgcggcacc gtaaatgccg aacagccact ggccgacgct
      541 gtccaggttc agccagattt cgctgatcgc cgtgccgaca atcagcacgc cggctaccac
      601 gtgggccacc accgaccagg tgcgcaacgt caacgcgagg gccggtgtgc cgaactccgg
      661 cttgcgcaac tccaacagcg tgaacaccac cggcagcgct gccagcgcga tcaccacgcc
      721 gacgatgatc cgcgccgcgg tccccagagc gtgtgaggtg tcgcccatca actcgggcca
      781 ccgcggcaac acgaagaaga agtagaggac gccggctgcg accgaagaca tcgcgtgcca
      841 gaacttggcg gccctgcgtc ccatgctcct cctcgagctg atgatccgga agtgaccaga
      901 ccctaccaat caggcctggt cacatcccgg actaagtgcg gaggatgcgg gatttgaacc
      961 cgcgagggct attaacccaa cccgcgttcc aggcgagcgc cataggccac taggcgaatc
     1021 ctccgtcggc catggtagcc gagcgcaggt cagggtcttc gggcaatcga accgggcgcg
     1081 gtgacgatgc aggccggaac ggcctgaggt ggcgaaccgg agccgggtac tagactctcg
     1141 gtggaccccg cgcggcgtct atcctgtgaa ctcccccagg gccggaaggc agcaagggtc
     1201 aatgggctct ggcgggtgcg cggggtcccc taatgtcgat ctggtagcca ggttggaacg
     1261 atgaaaggcg gatggtgtcg tacggctcgt tcagctccct aggccgtacc gacctcgagg
     1321 cattgcatgc ccgccatcag caggactacg ccgagctgca gtccaagaag ctcgctctcg
     1381 acctcacccg cggaaagccc tgccgcgagc agcttgatct gtccaacgct ctgctgagcc
     1441 tgcccgggtc tgactaccgc gacggagagg gcaccgacac ccgcaactac ggcgggcagc
     1501 atggcctacc cgaactgcgt gccatcttcg gcgaactcct cggcattccg gtgcaaaacc
     1561 tgatcgccgg caacaacgcc agcctcgaac tgatgcacga cgtcatcatg ttctcgatgc
     1621 tgcacggcgg ggtggattcg ccgcggccat ggaaagacga acccgaggtc aagttcctct
     1681 gcccggtgcc aggctacgac cggcacttcg ccatcaccga aaccctcggc atcgagatga
     1741 tcccgatccc gatgcgcgag gacggcccag acgtcgacct gatcgaagag ctggccgccg
     1801 tcgatccggc gatcaaaggc ttgtgggcgg tcccggtctt cgccaacccc accggcctga
     1861 gctactcgtg ggagtcggtg cgtcggctcg tccaaatgca gacggccgca aacgatttcc
     1921 ggcttttctg ggacaacgcc tatgcggtgc acacgctgac gctggatttc ccccgtccga
     1981 tcgatgtgct cggcctggcc gccgctgcgg gcaaccccaa ccggccgtat gtcttcgcgt
     2041 cgacgtcgaa gatcaccttc gccggtgcag gcgtcagctt cttcggcgga tcgctgggca
     2101 acatcgcctg gtacctgcag tacgccggca agaagtcgat cgggcccgac aagatcaacc
     2161 agcttcggca cctgcgcttc ttcggcgacg ccgatggtgt ccggctgcag atgctgcggc
     2221 accagcaact gctggctccc aagttcgcgc tggcgctgga gattctggac aagcggctga
     2281 gcgaatccaa gatcgcctcc tggaacgagc ccgaaggcgg ctacttcatc agcctcgatg
     2341 tgctgcccgg cacggcgcgg cgcacggtcg cgctggccaa ggatgcgggt atcgccgtca
     2401 ccgaggcggg cgcgtcgttc ccgtaccgga aagacccgga cgacaagaac atccggatcg
     2461 cgccgacgtt cccgccggcg tccgatctga acaacgcgat cgacgggctg gcgacgtgcg
     2521 cgttgctggc cgccagcgag tcactactga accgcgacta ggcggcgtcg gcgaccgtcg
     2581 gtagcctctg accgtggctc tctaccgcaa ataccgcccc gcgaccttcg ccgaagtggt
     2641 ggggcaggag cacgtcaccg agccactgtc gaccgcgttg accgcgggcc gaatcaatca
     2701 cgcgtacctg ttctccggtc cgcgtggctg cggcaagacc tcgtcggcgc gcatcctggc
     2761 ccgctcgttg aactgcgagc aggggccgac ggccacgcca tgcggcgtct gcgattcctg
     2821 catcggcctg gcgcccaacg ggcccggcag catcgatgtc gtcgaactcg acgcagccag
     2881 ccacggtggt gtggacgaca cccgtgagct gagagaccgc gcgttctacg cgccggccca
     2941 gtcgcgctat cgggtgttca tcgtcgacga ggcacacatg gtcaccactg cgggtttcaa
     3001 cgcgctgctc aagatcgtcg aggagccgcc cgaccatctg atcttcatct tcgccaccac
     3061 cgagccggag aaggtgctgc cgaccatccg ctcgcgcacc caccactacc cgttccggct
     3121 gctgccgccg cggaccatgc gagggctgat cgagcggatc tgcgcccagg aggatgtggt
     3181 cgtcgacgac gccgtgtacc cgctggtgat ccgggccggt ggcggttctc cccgtgacac
     3241 gttgtcggtg ctcgaccagc tgctggccgg tgccgaagga aatcgagtga cctaccagcg
     3301 cgcactgggc ttgctgggtg ccaccgatgt ggcgttgatc gacgaggccg tcgatgcgct
     3361 gggcgccggg gatgcggcgg cgctgtttgg ggcggtggaa tcggtgatcg acgcgggtca
     3421 cgacccccgc cgattcgcca ccgacctgtt ggagcgattc cgcgatttgc ttgtgctgca
     3481 agcgattccc gacgccacgt cgcgtggtgt ggttgatgcg cccgaagacg tgctggagcg
     3541 gatgcgcgag caagcgaccc ggatcggtcg cgcaacgctg acccgctacg ccgaggtggt
     3601 acacgccggc ctgaccgaga tgcggggcgc gacggcgccg cgtctgctgc tcgaagtgat
     3661 ctgcgcgcgg ctgctgctgc cgtcggcgag cga
//
LOCUS       DATAZA010000583         5643 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_926051, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000583 DATAZA010000000
VERSION     DATAZA010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5643
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_926051"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            145..2064
                     /locus_tag="VHZ56_14410"
     CDS             145..2064
                     /locus_tag="VHZ56_14410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018114642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX4299207.1"
                     /translation="MGNWKALLASALVASLGIATAVSAQDAAAPPLTDLPRNQTLIIN
                     NPENPEASPDNFNMWVAGNGSGWSNGLHQLALDTLWFIDPEAGLKANKGSFYNELAAS
                     PAEYNADFTEMTAHLRKGIMWSDGVEFTCDDVKYTVDTQIATPGMVWSAPFQASVASV
                     DCPDPYTVHFKLKAANARFHALFSVRWNGAWIMPKHVFEKQADIKSFKFNPPVSLGPY
                     TLKSFDPNGAWYIWQRRDDWDKTAMASFGKPAPTYVIYRSIPSNDKRLIEMVNGNLDV
                     IHDLSPEGMFSLAKQDSNARGWFPGFPYAHPDPTLPMVIFNNQNPMFQDKRVRWALAL
                     LLDPVEMSMASYRGAATMSAIAMPPTGTHLDDYFVPMQDYLNNYTLDTGKEKIKPYDP
                     TVGDQIAAQVRPTFGSAIPTDETAIKKSFGFGWWKKNPQAAGELLEAAGFTQQGGKWM
                     MPNGQPFKFTLNTFTDGVINRLGTDIAQQWTQAGIDVTAFADPNIYTQNLPNGTYEAA
                     TAWSIETWGGNPDLSFFLDSWHSQFLAKPGEVQTARNWQRWSNPDLDKIIETVRKTDF
                     NDHDANVALGIQFLKLMIDEMPVIPVMSFNVFTAYDQRYWTGFPSAEADPYTDPVPNW
                     ANSKFMLTQLKPTGK"
     gene            2130..3134
                     /locus_tag="VHZ56_14415"
     CDS             2130..3134
                     /locus_tag="VHZ56_14415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018448475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4299208.1"
                     /translation="MKAYLVFALKRLIQFVAVVVCGCSIAFVIAHLSPLSPVDSIIMQ
                     VTGRSASNPEAIKALRAVLTQEFGLDVPLWQQYLNFIQHLFVLDFGPALIAFPTPAMD
                     LVELALPWTVGLLLVAILITWIVGNVAGGLAGYFQNSRLLKAFGIVAIGIQPIPYYIV
                     AFMLVIIFGFLWPVLPISGGFAMDVTPGWSFQFALSVIYYSILPAAALVIVGIGTWFL
                     GMRALVSNIITEDYVTYAELAGVRQSRIVGSYVIRNALVPQLTALALTLGSVFSGTVI
                     TEQVFTYPGLGSLLVRAVNGGDTGVVLAISCISIISVAGAIFIIDLLHPLIDPRVRSE
                     "
     gene            3139..3996
                     /locus_tag="VHZ56_14420"
     CDS             3139..3996
                     /locus_tag="VHZ56_14420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020053049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX4299209.1"
                     /translation="MFSVVRDLIRYNTEFTIGLVLVGLVIIFSLLSFVSPVDPTAVYR
                     VAPDLPPSLAYVFGTNSRGQDMFWQLTFAFRDTLTFGLTVAFLSRIIAITIGLLAGYL
                     GGWVDRASMFVTDIFVAIPIFPILILFYFVMKTSANGFALALLMACFGWPYDARLIRS
                     VALGLRYREFSRQAVFAGMPPLKIMFEEHLPYVMPVIFSTALANMIWSIGLEVTLAVL
                     GFTNLNIPTVGTTLYWANNHSALLVGVWWWIAIPVAIVVMLFVGLFLLAVSLNEYIDP
                     RSRLRRMGA"
     gene            3999..5021
                     /locus_tag="VHZ56_14425"
     CDS             3999..5021
                     /locus_tag="VHZ56_14425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012555260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX4299210.1"
                     /translation="MADILTVDRLKAYYLMNYFGVRREVRAVDDITMSVGRSEVYGIA
                     GESSSGKTSFIKVLAAAIRPPLRVVAGSATYHFKAGDIDVTAATPDEIAAVRWRSLSY
                     IMQGSMSVLNPLRKVGRIFEDFASRPMGLSGSAFRHRVVEHLERLKLNPNILNAYPHE
                     LSGGMRQRVTIGLATVCQPEFMIADEPTTALDVVVQKDVLALIKDLQRQMDSSIVFVT
                     HDMAVHANIADRIGIIYAGRLVEEAPTRQIFTTPKHPYTAHLVASLPRIGDTTQRPAL
                     EGRPPNLADPPPGCRFHPRCPLAIDKCRTDVPPLETVAPGHRSACWRAADVVPLAPAH
                     LAELVR"
     gene            5018..>5643
                     /locus_tag="VHZ56_14430"
     CDS             5018..>5643
                     /locus_tag="VHZ56_14430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015917793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/oligopeptide/nickel ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX4299211.1"
                     /translation="MTALLDVRNVSKRFPIGGVLSGREIVAVEDATLSVGETGPEIFT
                     IIGESGSGKTTLARMILGLERPSSGEIAFRGKPVVHRSRAERLAFMASVQPVFQNPFE
                     AFNPLKKVDRYLASTAHQFLRLRDRAAIDAAMDGALQKVGLSLVEIRGRFPHELSGGQ
                     LQRVAIARALIPNPPLLIADEPVSMVDASLRMSIVNLLKQLRDDTGVSV"
BASE COUNT          955 a         1961 c         1667 g         1060 t
ORIGIN      
        1 cgtttgggcg gagaacgggt gcgaaccata ttgtatattg gcacttctgg tttgtatcac
       61 aaagcgcgtt gacaatggat ggtcctaagg tatcgtccgc ggcgtagggt cgctggaggg
      121 cgtccctcgt cagggaggat atcaatggga aactggaagg cgcttctagc gtcggctctg
      181 gttgcgtcgc tgggcattgc caccgcagtg tccgcgcagg acgctgccgc accaccgctt
      241 accgatctgc ctcgcaatca aactctgatc atcaacaacc cggaaaaccc ggaagcctcg
      301 cccgacaact tcaatatgtg ggtggcaggc aacggctcgg gctggtcgaa cggcctgcat
      361 caactggcgc tcgacacact ctggttcatc gatccggaag ccggcctgaa ggcgaacaag
      421 ggctcgttct acaacgagct ggcggcaagc cccgccgaat acaatgccga cttcaccgag
      481 atgaccgcgc acctgcgcaa gggcatcatg tggagcgacg gcgtcgagtt cacctgcgac
      541 gacgtgaaat acaccgtcga tacccagatc gcgacgccgg gtatggtgtg gagcgctccg
      601 ttccaggcct cggtcgccag cgtcgactgc ccagacccct acaccgtgca cttcaagctg
      661 aaggcagcga acgcccgctt ccacgcgctg ttctcggtgc gctggaacgg tgcctggatc
      721 atgcccaagc acgtcttcga aaagcaggcc gacatcaagt cgttcaagtt caatccgccg
      781 gtcagccttg ggccctacac gctgaaatcg ttcgacccca atggcgcctg gtacatctgg
      841 cagcgccgcg acgactggga caagaccgcc atggcctcgt tcggcaagcc ggcgccgacc
      901 tacgtgatct accggtccat tccgtccaac gacaagcgcc tcatcgagat ggtcaatggc
      961 aatctcgacg tgatccacga tttgtcgccg gaaggcatgt tcagcctcgc caagcaggac
     1021 tccaacgccc gcggctggtt cccgggcttc ccctatgccc atccggatcc gacgctgccg
     1081 atggtgatct tcaacaacca gaacccgatg ttccaggaca agcgcgtccg ctgggccctg
     1141 gcgctgttgc ttgatccggt cgagatgtcg atggcgtcct atcgtggcgc cgcgaccatg
     1201 tcggcgatcg ccatgccgcc caccggcacg cacctcgacg actacttcgt gccgatgcag
     1261 gactacctca acaactacac gctcgacacg ggcaaggaga agatcaagcc gtacgacccg
     1321 accgtcggcg atcagattgc tgcccaggtc cggccgacgt tcggcagtgc catcccgacg
     1381 gatgaaacgg caatcaagaa gtcgttcggc ttcggctggt ggaagaagaa cccgcaggcc
     1441 gcaggcgaac tgctcgaagc cgccggcttc acccagcagg gtggcaagtg gatgatgccg
     1501 aatggccagc cgttcaagtt cacgctcaac accttcaccg atggcgtgat caaccgcctg
     1561 ggcaccgata tcgcccagca gtggacgcag gcgggtatcg atgtgacggc ctttgctgac
     1621 ccgaacatct atacgcagaa cctgcccaac ggcacctacg aggctgcaac ggcctggtcg
     1681 atcgagacct ggggcggcaa ccccgacctc agcttcttcc tcgacagctg gcacagccag
     1741 ttcctcgcca agcccggcga ggtgcagacg gcccgcaact ggcagcgctg gagcaacccg
     1801 gatctcgaca agatcatcga aacggtccgc aagaccgatt tcaacgatca cgacgcgaac
     1861 gtcgccctgg gcatccagtt cctgaagctg atgatcgacg agatgccggt gatcccggtc
     1921 atgtcgttca acgtcttcac ggcatacgac cagcggtact ggaccggctt cccgtcggcc
     1981 gaggccgatc cctacaccga tcccgttccc aactgggcga actccaagtt catgctcacc
     2041 cagttgaagc cgacgggcaa atagcttccg acagacttgg cgcccggctt cccggccggg
     2101 cgcatctctt ctcaaggctt gagcggtgga tgaaggctta cctcgtattc gcccttaagc
     2161 ggctcatcca gtttgtcgcc gtcgtcgtct gcggctgctc gatcgccttc gtgatcgcgc
     2221 atctgtcccc gctcagtccg gtcgacagca tcatcatgca ggtgaccggg cgttccgcgt
     2281 ccaatcccga ggcgatcaag gcgctgcgcg ccgtgctgac ccaggaattc gggctcgacg
     2341 tgccgctctg gcagcaatac ctcaacttca tccagcacct gttcgtgctg gatttcggcc
     2401 cggcgctgat cgcctttccg acccccgcga tggacctcgt ggaactggcg ctgccctgga
     2461 ccgtgggcct gctgctggtc gccatcctga tcacctggat cgtcggcaac gtcgccggcg
     2521 gccttgccgg ctacttccag aactcgcggc tgctcaaggc cttcggcatc gtcgccatcg
     2581 gtattcagcc gatcccctac tacatcgtcg ccttcatgct ggtgatcatc ttcggcttcc
     2641 tctggcccgt gctgccgatc tcgggcggct tcgccatgga tgtgacgccc ggctggagct
     2701 tccagttcgc cctgtcggtg atctactatt ccatccttcc cgcggcggcc ctcgtgatcg
     2761 tcggcattgg aacgtggttc ctcggcatgc gggcgctcgt ctccaacatc atcaccgagg
     2821 actacgtcac ttacgccgag ctcgccggcg tccggcagag ccggatcgtc ggttcctacg
     2881 tcatccgcaa cgcgctggtg ccgcagctca cggcgctggc gctgaccctg ggcagcgtgt
     2941 tttcgggtac cgtcatcacc gaacaggtat tcacctaccc gggtctgggc tcgctcctcg
     3001 tgcgcgccgt caatggcggc gacaccggcg tcgtgctcgc gatttcctgc atctcgatca
     3061 tctccgttgc cggggcgatc ttcatcatcg atctgctgca cccgctgatc gatccccgcg
     3121 tgcggtccga gtagcccgat gttttccgtt gtccgcgacc tcatccgcta caacaccgag
     3181 tttacgatcg ggctcgtgct cgtcgggctc gtcatcatct tttcgctgct gagcttcgtc
     3241 tcgccggtcg atcccaccgc ggtctaccgc gtcgctcctg acctgccgcc gagcctggcc
     3301 tatgtcttcg gcacgaattc gcgcggccag gacatgttct ggcagctgac cttcgcgttc
     3361 cgcgacaccc tgaccttcgg cctgacggtc gcgttcctct cgcgcatcat cgccatcacc
     3421 atcgggctgc tcgccggcta tctgggcggc tgggtcgacc gcgcgtcgat gttcgtcacc
     3481 gacatcttcg tcgccatccc gatctttccg atcctcatcc tgttctattt cgtcatgaag
     3541 accagcgcca acggcttcgc cctggcgctg ctgatggcct gcttcggctg gccttacgac
     3601 gcgcggctga tccgctctgt cgcgctcggc ctgcgctacc gcgaattcag ccggcaggcg
     3661 gtgttcgccg gcatgccgcc gctcaagatc atgttcgagg agcatctgcc ctacgtcatg
     3721 ccggtgatct tttcgaccgc gcttgccaat atgatctggt cgatcggcct cgaggtgacg
     3781 ctggcggtgc tcggcttcac caacctcaac atccccacag tcggaacgac gctctactgg
     3841 gccaacaacc actcggcgct gctggtcggc gtctggtggt ggatcgccat ccccgtcgcc
     3901 atcgtggtga tgctgttcgt cgggctgttc ctgctggccg tgtccctcaa cgaatatatc
     3961 gatccgcgta gccggctacg gcgaatggga gcctgaggat ggccgatatc ctgaccgtcg
     4021 atcggctcaa ggcctattac ctgatgaact atttcggcgt ccggcgcgag gtgcgcgccg
     4081 tcgacgacat caccatgtcg gtcggccgca gcgaggtcta cggcatcgcc ggcgagagct
     4141 cgagcggcaa gaccagcttc atcaaggtgc tggccgccgc catccggccg ccgctgcgcg
     4201 tcgtcgccgg cagcgccacc taccacttca aggctggcga tatcgacgtg acggcggcga
     4261 cgccggacga gatcgcggcg gtccgctggc gcagcctcag ctacatcatg cagggctcga
     4321 tgagcgtgct caacccgctg cgcaaggtgg gccgcatctt cgaggatttt gccagccggc
     4381 cgatgggcct gagcggcagc gcgttccgcc accgggtcgt cgaacatctc gagcgcctga
     4441 agctcaatcc gaacatcctc aatgcctatc cgcacgaatt gtccggcggc atgcggcagc
     4501 gcgtcaccat cgggctggcg accgtgtgcc agcccgagtt catgatcgcc gacgagccga
     4561 ccacggcgct cgacgtggtg gtgcaaaagg acgtgctggc cctgatcaag gacctgcagc
     4621 gccagatgga ctcttccatc gtcttcgtca cccacgacat ggcggtgcat gccaacatcg
     4681 ccgaccgcat cggcatcatc tatgccggcc gcctggtcga ggaggcaccg acgcgccaga
     4741 tcttcaccac gcccaaacac ccgtacacgg cccatctggt ggccagcctg ccgcgcatcg
     4801 gcgacaccac gcagcggccg gcgctcgagg gccgcccgcc caatctggcg gacccgcccc
     4861 cgggctgccg gttccatccg cgctgtccgc tggccatcga caaatgccgc accgacgtgc
     4921 cgccgctcga gaccgtcgca cccggccatc gctcggcgtg ctggcgcgcc gccgacgtcg
     4981 tgccgctggc gccggcgcac ctcgcggagc tcgtccggtg accgcgctgc tcgacgtccg
     5041 caatgtcagc aagcgcttcc cgatcggcgg cgtgctctcc ggccgcgaga tcgtggcggt
     5101 cgaggacgcc actctctcgg tcggcgaaac cggcccggaa atcttcacga tcatcggcga
     5161 gtccggttcg ggcaaaacca cgctggcgcg catgatcctc gggctcgagc gaccgagcag
     5221 cggcgaaatc gcatttcgcg gcaagccggt ggtgcaccgc agccgcgccg agcggctggc
     5281 cttcatggcg agcgtccagc cggtgttcca gaacccgttc gaggcgttca acccgctgaa
     5341 gaaggtcgac cgctacctgg cctccaccgc ccaccagttc ctgcgcctcc gcgaccgcgc
     5401 ggcgatcgat gcggcgatgg acggggcgct gcagaaggtc gggctgagcc tcgtcgaaat
     5461 ccgcggccgc tttccgcacg agctgtccgg cggccaattg cagcgcgtcg ccatcgcccg
     5521 cgccctgatc cccaacccgc cgctgctgat cgccgacgaa cccgtttcga tggtcgacgc
     5581 ctcgctgcgc atgtcgatcg tcaacctgct gaagcagctc agggacgaca ccggcgtgtc
     5641 ggt
//
LOCUS       DATAZA010000584         4982 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2204381, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000584 DATAZA010000000
VERSION     DATAZA010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 4982)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4982)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4982
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2204381"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..745
                     /locus_tag="VHZ56_14435"
     CDS             <1..745
                     /locus_tag="VHZ56_14435"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HEX4299212.1"
                     /translation="RALGLTPDNTQQLRETRFYTSHEALLLGYEEALTRRDSITGDWY
                     ATSGHMLWIGDRTRQPDAAHTEYFAGIRNPIGIKCGPTLSGDDLLKLLDRLNPTDEAG
                     RVTLICRFGSDKIKEHLPRLIETVRKAGRTVVWCSDPMHGNTVKATNGYKTRPFDKVL
                     SEVHSFFQVHRQMGTYAGGIHVEMTGDDVTECVGGAAAAVTEASLKDRYHTYCDPRLN
                     ASQSLEMAFLVAEEIRAQRPARQALSIGM"
     regulatory      795..936
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            968..1177
                     /locus_tag="VHZ56_14440"
     CDS             968..1177
                     /locus_tag="VHZ56_14440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020051492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbtB-domain containing protein"
                     /protein_id="HEX4299213.1"
                     /translation="MSDIALAPEALPHPIPVRELLPWLVFGGLIALIALYFVGAEQGA
                     TSVISGMYVHEWVHDSRHLLGFPCH"
     gene            1189..1929
                     /locus_tag="VHZ56_14445"
     CDS             1189..1929
                     /locus_tag="VHZ56_14445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016557247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbtA family protein"
                     /protein_id="HEX4299214.1"
                     /translation="MARSFLVRGMLVGLVAGLLVFLYARYFGEPAVDGAIGVEEELAK
                     AAGEMPGPDLVPRDLQSSWGLFTGVMLYSVAIGGIFSLLNAYAWGRVGRLGPRATAAL
                     LAGAAFVAVYLVPFLKYPANPPSVGNPDTIQYRTALYFGMIVVSVAAMVACLNLGRAL
                     LGRLERWHAVLAAGATYIVIVLVAYAVLPSINEVPQAFPAVLLWQFRTVSLGMQAILW
                     TALALLFGELTERSLRAVAMPARPLRRA"
     gene            2043..3143
                     /locus_tag="VHZ56_14450"
     CDS             2043..3143
                     /locus_tag="VHZ56_14450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299215.1"
                     /translation="MLRPIPSLIALLAAIAVAGPAIAADIGDNSGDDGSSGLRDGYPV
                     EPGDWAGLGDKDDPLTFETGIRYWYSVGSDSFSSGGSSLSSTDAAHSGELHLRIEDHA
                     TNVYASALAGYSVKMDGSYSAPSTSGSFTDGHIGYIGADIGWNMVGDHNGSGFGPLVG
                     YMYWQEAPDTGRFNYTTATTGSDVTYNPTTGQTDVQGDSSPNEIDTNLLRLGVQGKAK
                     LGDFIDISGEVAAVPYAKVSGTVGEDDTTFDTSVYSGPAQPPYGGENGNISSMRSSPT
                     TVDGWGYGAQAEAWLGIHPTDNLAVRLGGRLWYLQGSADETYSKATISNPGGTPGNYN
                     TDPTVTNTNLINTSNPFSMLRYGLLAELDYTF"
     gene            3219..4934
                     /locus_tag="VHZ56_14455"
     CDS             3219..4934
                     /locus_tag="VHZ56_14455"
                     /EC_number="6.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014130070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003952 - NAD+ synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HEX4299216.1"
                     /translation="MADRLRIALAQLNPKVGDLAGNLALAKGALADAQAAHADILLLS
                     ELFLTGYFPEDLFFKPRFVEDALATAGELVRATRGTGVSLLLPTVWREGYRLYNAVLL
                     AEDGAVVCRRYKRELPNDDVFYERRYFTPGPLPEPMTIRGVCIGVPVCEDIWHRPVCE
                     YLVERGAELLICPNGSPYWKNKQHVRRDLARQRTEEDGVPLLYLNQVGGQDELVFDGA
                     SFGVEPGNRLVVQGKSFESDFIVSDWQRGPAGWRCVKGDVTPLASTAEAPWQAMLRGL
                     RDYVRKNGFNRVVLGLSGGIDSALVAAIAADALGPDNVHCLMLPYRYTSGDSLRDAED
                     CARRLHLRYDTVPIGRPVDAALEELAPVFGNAPPDLTEENIQSRMRGLVLMAVSNKSG
                     AMLLTTGNKSEMAVGYATIYGDMNGGFNPIKDLFKMEVYKLARWRNAHIPQGSLCPRG
                     DVIPEAIIDKAPTAELRPDQTDQDSLPPYAILDEVLTGMIEDELSIAEIVARGEGRFD
                     RALVQRIERLVLLAEYKRRQAAPGVKMTPKAFGIGRKYPITNGYRDNSEIVAREPAPM
                     RQGVE"
BASE COUNT          814 a         1846 c         1535 g          787 t
ORIGIN      
        1 gcgcgccctc gggctcacgc ccgacaacac ccagcagctg cgcgagacgc ggttctacac
       61 cagccacgag gcgctgctgc tcggctacga ggaggcgctc acccgccgcg actcgatcac
      121 cggcgactgg tacgccacct cgggccacat gctgtggatc ggcgaccgca cccgccagcc
      181 cgacgccgcg cacaccgaat acttcgccgg catccgcaat cccatcggca tcaaatgcgg
      241 cccgacgctg tccggcgacg acctgctgaa gctgctcgat cgcctcaatc cgacggacga
      301 agccggccgc gtcacgctga tctgccgctt cggctcggac aagatcaagg agcacctgcc
      361 gcggctgatc gagaccgtgc gcaaggccgg ccgcaccgtc gtctggtgct ccgatccgat
      421 gcacggcaac accgtcaagg cgaccaacgg ctacaagacc cggcccttcg acaaggtgct
      481 gagcgaggtc cactcgttct tccaggtgca ccggcagatg ggcacctatg cgggcggcat
      541 ccacgtcgag atgaccggcg acgacgtcac cgaatgcgtc ggcggcgccg ctgcggcggt
      601 cacggaggcc agcctcaagg atcgctacca cacctactgc gatccccgcc tcaacgcctc
      661 gcagtcgctg gagatggcct tcctcgtcgc cgaggaaatc cgcgcccagc gcccggcgcg
      721 gcaggcgctc agcatcggca tgtgactgaa aatgacgtcc atccaggcgg tgggcggcaa
      781 cgctgttgac gcccgcgcca cgtgacgggc atagttgcgc tcgcacgtcg tggactcgga
      841 agcgggtgga attcccgcac ggtcgcgcca ctgtaaccga tgaacgcccg caaggcgtgt
      901 tggaagccag acccggccac ggcatcgcga gaaacctcaa cgggacgcga aatcccaagg
      961 agcaacgatg tccgatatcg ctttggcgcc cgaggcgctg ccccacccca ttcccgtccg
     1021 cgaactgctg ccctggctgg tcttcggcgg cctgatcgca ctgatcgcgc tgtacttcgt
     1081 cggcgccgag cagggggcga cctccgtgat ttccggcatg tatgtgcacg aatgggtaca
     1141 cgacagccgg cacctcctcg gcttcccctg ccactgaggg gaattgccat ggccagaagt
     1201 ttcctcgttc gcggtatgct cgtcgggctc gtcgcgggtc tcctggtgtt cctctatgcc
     1261 cgctatttcg gcgagccggc cgtcgatggc gccatcggcg tcgaggagga actcgccaag
     1321 gcggcgggcg aaatgcccgg gccggacctc gtcccgcgcg acctgcagtc gagctggggc
     1381 ctgttcaccg gcgtcatgct ctattccgtg gccatcggcg gtatcttctc gctgctcaac
     1441 gcctatgcct ggggccgcgt cggccgcctc ggcccgcggg ccactgcggc gttgctggcg
     1501 ggcgccgcgt tcgtcgccgt ctatctcgtg ccattcctca aataccctgc caatccgccc
     1561 tccgtcggca accccgacac catccagtat cgaacggcgc tctacttcgg catgatcgtc
     1621 gtctctgtgg cggcaatggt cgcctgcctc aacctcggcc gggcgctgct cggccggctc
     1681 gagcgctggc acgcggtact ggccgccggc gccacctaca tcgtgatcgt gctcgtcgcc
     1741 tatgccgtgc tgccctcgat caacgaggtg ccgcaggcgt tcccggccgt gctcctctgg
     1801 cagttccgca ccgtgtcgct gggcatgcag gcgatcctgt ggactgcgct ggcgctgctc
     1861 ttcggcgagc tgaccgagcg cagcctccgc gccgtcgcca tgccggctcg gccgctgcgc
     1921 cgtgcctagt cctgccgtgg ccggcccggc ttgcaatctg caatcggccc ggccgcaatt
     1981 agcggagcat taaccctaac aaggcataaa cgaagcgtcg cgttcgttgt gccgggggtc
     2041 tcatgcttcg tcccattcca agcctcatcg ccctgcttgc cgccatcgcc gtggccggcc
     2101 ccgccatcgc tgccgatatc ggcgataact ccggcgacga cggctcgagc ggcctccgcg
     2161 acggctatcc cgtcgagccc ggcgactggg ccgggctggg cgacaaggac gatccgctga
     2221 ccttcgagac cggcatccgc tactggtact cggtcggctc ggacagtttc agctccggcg
     2281 gcagttcgct gagctccacc gacgcggcgc attcgggcga gttgcacctg cgcatcgaag
     2341 accatgccac caacgtctat gccagcgcgc tcgccggcta ttcggtgaag atggatggca
     2401 gctactccgc gccctcgacc tcgggaagct tcaccgacgg ccacatcggc tacatcggcg
     2461 ccgacatcgg ctggaacatg gtgggcgacc acaacggttc cggcttcggt ccgctcgtcg
     2521 gctacatgta ctggcaggaa gcccccgaca ccggccgctt caactacacc acggcgacca
     2581 ccggatcgga tgtcacctac aatccgacca ccggccagac cgacgtccag ggcgacagct
     2641 cgcccaacga gatcgatacc aacctgctgc gcctcggcgt gcagggcaaa gccaagctcg
     2701 gcgatttcat cgacatctca ggcgaggtcg cggccgtccc ctacgccaag gtcagcggta
     2761 ccgtcgggga agacgacacc accttcgaca ccagcgtcta cagtggcccc gcacagccgc
     2821 cctacggcgg ggaaaacggc aacatctcct cgatgcgctc gtcgccgacc accgtcgacg
     2881 gctggggcta tggcgcccag gccgaagcct ggctcggcat ccacccgacc gacaatctcg
     2941 ccgtccgcct cggcggccgc ctctggtacc tgcagggcag cgccgacgaa acctacagca
     3001 aggcgacgat ttccaatccg ggcggcacgc cgggcaacta caacacggac ccgaccgtca
     3061 ccaacacgaa cctcatcaac acctccaatc ctttcagcat gctgcgctac ggcctcctgg
     3121 ccgagctcga ctacactttc tagccgccgt gccgcggcgc ttgccccacc gggggtgagc
     3181 ggataaggct tgccgcgatt tcggcaaggt gttttcacgt ggcagaccgg ctgcgcatcg
     3241 cgctcgccca gctcaatccc aaggtcggcg acctcgccgg caatctggcg ctggccaagg
     3301 gcgcgctcgc cgatgcacag gcggcccacg ccgacatcct gctgctctcc gagctgttcc
     3361 tcaccggcta cttccccgag gatctgttct tcaagccgcg cttcgtcgag gacgcgctgg
     3421 cgaccgccgg cgagctggtg cgcgccaccc gcggcaccgg cgtcagcctg ctgctcccca
     3481 ccgtctggcg cgagggctac cggctctaca atgccgttct tctggccgag gacggcgcgg
     3541 tcgtctgccg ccgctacaag cgcgagctgc ccaacgacga cgtgttctac gagcgccgct
     3601 acttcacccc cgggccgctg cccgagccga tgaccatccg cggcgtctgc atcggcgtgc
     3661 cggtctgcga ggacatctgg caccggccgg tctgcgagta tctggtagag cggggcgccg
     3721 agctgctgat ctgtcccaac ggctcgccct actggaagaa caagcagcat gtccgccgcg
     3781 acttggcgcg acagcgcacc gaggaagacg gggtgccgct actctatctc aaccaggtcg
     3841 gcggccagga cgagctggtg ttcgatggcg cctccttcgg cgtcgagccc ggcaaccggt
     3901 tggtggtcca gggcaagagc ttcgagagcg atttcatcgt ctccgactgg cagcgcggcc
     3961 cggccggctg gcgctgcgtc aagggcgacg tcaccccgct cgcctcgacc gccgaggccc
     4021 cgtggcaggc gatgctgcgc ggcctgcgcg actacgtccg caagaacggc ttcaaccgcg
     4081 tcgtcctggg tctctccggc ggcatcgata gcgcgctggt cgccgccatc gccgccgacg
     4141 ccctcggtcc cgacaacgtc cactgcctca tgctgcccta ccgctacacc tcgggcgaca
     4201 gcctgcgcga cgccgaggac tgcgcccggc gcctgcacct gcgctacgac accgtgccga
     4261 tcggccgccc cgtcgatgcc gcgctcgagg agctcgcccc ggtcttcggc aacgccccgc
     4321 ccgacctcac cgaggagaac atccagtcgc gcatgcgcgg cctcgtgctg atggcggtct
     4381 ccaacaaatc cggcgccatg ctgctcacca ccggcaacaa gtccgagatg gcggtgggct
     4441 acgccaccat ctatggcgac atgaacggcg gcttcaatcc gatcaaggac ctcttcaaga
     4501 tggaggtcta caaattggcc cgctggcgca acgcccacat cccgcagggc agcctctgcc
     4561 ccaggggcga cgtcatcccc gaggcgatca tcgacaaggc gcccaccgcc gagctgcgcc
     4621 cggaccagac cgaccaggat tcgctgccgc cctacgccat cctcgacgaa gtgctgaccg
     4681 gcatgatcga ggacgaactc tcgatcgccg agatcgttgc gcgcggcgag ggccgcttcg
     4741 accgcgcgct ggtgcagcgc atcgagcggc tggtgctgct ggccgaatac aagcggcggc
     4801 aggcggcgcc cggcgtcaag atgaccccga aagccttcgg catcggtcgc aaatacccca
     4861 tcaccaacgg ctaccgcgac aacagcgaga tcgtcgcccg cgagccggcc ccgatgcggc
     4921 agggcgtcga gtgaccgtcg tccgctacgc gccgtcgccg accggccgcc tgcacctggg
     4981 ca
//
LOCUS       DATAZA010000585         5852 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2320117, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000585 DATAZA010000000
VERSION     DATAZA010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 5852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5852
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2320117"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1618
                     /locus_tag="VHZ56_14460"
     CDS             <1..1618
                     /locus_tag="VHZ56_14460"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HEX4299217.1"
                     /translation="PAPRPVADHPVVATSSRNTFIEAARRAAQRQTPGRAEVAPNSLI
                     GRALSRFQTSPAEAAPNAERPIAAKPAAKPLRTMQPEPAPAPVVATPTIEPPAGADGP
                     VARPRPTDGFLGRNRKVILLGAAVVALAFLTMNLIVQRLAQNAAAPAPVASAPATTGD
                     IDGDGTPAADATDPSTGMPPVVSATDPLATGAIDPSAAQGFSPSAAQQVMPSAFSPTA
                     AATDGDDETTTSLAALDTPSSVEPLAAPVADSGPVKVDLPPEGVGPMDLRQAAADGDA
                     RAQFEVGAIYTEGRAVTQDYKLAAVWYERGAAQGFAPAEYRLGSLYENGQGVDKNLDT
                     ARLWYEKAAEAGNRMSMHNLAALYAGGQLGKQQFDSAAKWFEEAANRGLVDSQFNLGM
                     LYARGLGVPQSLQDSFKWFGIAALSGDKDATKARDDIARSLDADTVAKLTVEVNAFKP
                     EPIDLAANFAPIGTWSKSFDPGETITTKDIVSSVQKALQRLGYDVGTPDGVAGAKTAT
                     AIKSFEAATGMSQVGMVNPRLLAVLGSQPT"
     gene            1746..2678
                     /locus_tag="VHZ56_14465"
     CDS             1746..2678
                     /locus_tag="VHZ56_14465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019996577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX4299218.1"
                     /translation="MQIYLPIAALSMNLFFLVGIGGAVGFLSGLFGVGGGFLLTPLLI
                     FAGVPSPVAIASVTPQVAASSTSGALSYYRRNAIDLHLALYLILSSTIGSMIGVTIFS
                     LLRSAGQLDLFISVAYLLLLGFLGSLMLIEAVRTIVRRRRGMMVREKLPSQHTWMHGL
                     PLRIRFKKSRLYISVLPVLGIGLFVGVVGALLGIGGGFILVPALVYLLRVPGNVVIGT
                     SLLQVVAMMCVTTILQALTSQSVDVLLAFCLMVGGTVGAQFGASAGKYLRGDQLRALL
                     ALLVLAVAIRFGLALLLRPGDVFSMAVLGPGGTG"
     gene            2675..3427
                     /locus_tag="VHZ56_14470"
     CDS             2675..3427
                     /locus_tag="VHZ56_14470"
                     /inference="COORDINATES: protein motif:HMM:NF021148.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02186 family protein"
                     /protein_id="HEX4299219.1"
                     /translation="MRRVLLALVLLLAATPAGAEKLIATVSSSSVEITSSFDGAVLSL
                     FGTIEPDTPGIALSGPYNVIVIVTGPLQDRVARLKTNNWGIWTNTDQVVFRQFPSFYE
                     VLSSGRLDQIATAQFIAERNVLPDSQAVAAAQSTGIRSVQFGTELVRLMTSEGHFSLQ
                     QNGVRFLSDTAYIAQVTLPSDVANGPFLARTLVLKDHELVAEGTSGFSVRKNGFENFV
                     FVASRQQPLLYGLVCVALALGTGWFAGVAFKR"
     gene            complement(3424..4095)
                     /gene="pdeM"
                     /locus_tag="VHZ56_14475"
     CDS             complement(3424..4095)
                     /gene="pdeM"
                     /locus_tag="VHZ56_14475"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR04123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     endonuclease PdeM"
                     /protein_id="HEX4299220.1"
                     /translation="MLLNFAGHVFEPLLSGALFWRAESMLLVADLHLEKFSSFARRGH
                     MLPPYDTGLTLKRLERDVEATRAERVVSLGDSFHRDEGVETLLDADRLRLATLLGKSH
                     WTWLSGNHDPSPHALGGVCVSYLEHRGVTLVHEPPRNGRAAIAGHLHPAATVVANGHG
                     TRRPCFVHDGKLLLLPAYGAGAGSMNILGPIFHGLFSYETLEVTMLGRSRLYPVSTRR
                     LVAGV"
     gene            complement(4208..5852)
                     /locus_tag="VHZ56_14480"
                     /pseudo
     CDS             complement(4208..5852)
                     /locus_tag="VHZ56_14480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017958881.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="helicase-related protein"
BASE COUNT          899 a         1935 c         2110 g          908 t
ORIGIN      
        1 tcctgccccc cggccggtag cggaccaccc ggtcgtcgcg acatcgagcc gcaacacctt
       61 catcgaggcc gcccgccgcg cggcgcaacg gcagactccg ggtcgtgccg aggtcgcccc
      121 caattcgctg atcggacgcg cgctgtcccg gttccagacc agcccggctg aggccgctcc
      181 caacgccgaa cggccgatag cggcgaagcc ggcagccaag ccgctgcgga ccatgcagcc
      241 cgaaccggcg ccggcgcctg tcgtggccac gcccacgatc gaaccgccgg ccggcgcgga
      301 cgggcctgtc gccaggcccc ggccaacgga cggcttcctc ggccgcaacc gcaaggtcat
      361 cctgctcggt gcggccgtcg tggcgctggc cttcctgacg atgaacctca tcgtgcaacg
      421 gttggcgcag aatgcggcgg cacctgcccc cgtggcctcg gcaccggcga ccaccggcga
      481 catcgacggc gacggcacgc cggcggccga cgcaaccgat ccttcaaccg gcatgccgcc
      541 tgtggtgtcg gcgaccgatc cgctggcgac cggggccatc gacccatccg ccgcgcaggg
      601 cttcagcccc agtgcggcgc agcaggtgat gccgagcgcg ttctcgccga cggcggcggc
      661 gaccgacggc gacgacgaga cgaccaccag cctcgcggcg ctcgacacgc cgtcctcggt
      721 cgagccgctg gcggcgccag tggcggacag cggcccggtc aaggtcgatc tgccgcccga
      781 aggcgtcggg ccgatggatc tgcggcaggc ggccgcggac ggcgacgcgc gggcgcagtt
      841 cgaggtcggc gcgatctata ccgagggccg ggccgtcacc caggactaca agctggccgc
      901 ggtctggtac gagcgcggcg cggcgcaggg atttgcgccg gcggaatatc gcctcggcag
      961 cctctacgag aacggccagg gggtggacaa gaacctcgat acggcgcggc tctggtacga
     1021 gaaggccgcc gaagccggca accgcatgtc gatgcacaat ctcgccgcgc tctacgccgg
     1081 cggccagctc ggcaagcagc agttcgattc cgccgccaag tggttcgagg aagcggccaa
     1141 tcgcgggctg gtcgacagcc agttcaacct cggcatgctc tatgcccgcg ggctgggcgt
     1201 gccgcagagc ctgcaggact cgttcaagtg gttcgggatc gcggcgctgt cgggcgacaa
     1261 ggacgcgacc aaggcgcgcg acgacatcgc ccgctcgctc gatgccgaca cggtggccaa
     1321 gctgacggtc gaggtcaacg cgttcaagcc cgagccgatc gatctcgccg ccaatttcgc
     1381 gccgatcggc acgtggtcga agagcttcga tccgggcgag acgatcacca ccaaggacat
     1441 cgtcagcagc gtgcagaagg cgctgcagcg gctcggctac gacgtcggca cgccggacgg
     1501 ggtggccggg gcgaagacgg cgaccgcgat caaatcgttc gaggcggcga cgggcatgag
     1561 ccaggtcggc atggtcaatc cgcgcctgct ggccgtgctg ggcagccagc cgacatgatg
     1621 gcggcgccgg cgtccggcgg aaccggataa atgtctcatt gtcgtcgaaa ccagagacga
     1681 aggtgagacg ctcaatgtag gggacgcggg ccgctcgcgt ccctcgctgc tatctagagt
     1741 tccctttgca gatctacctg ccgatcgccg cgctttcgat gaacctcttc ttcctcgtcg
     1801 ggatcggagg agcggtggga ttcctttccg gcctgttcgg ggtgggcggc ggtttcctgc
     1861 tgacgccgct gctgatcttt gccggggtgc cctcgcccgt cgccatcgcc tcggtgacgc
     1921 cgcaggtcgc cgcgtcctcg acgtcggggg cgctcagcta ctaccggcgg aacgccatcg
     1981 acctgcatct ggcgctctat ctcatcttgt cgagcaccat cggttcgatg atcggggtca
     2041 cgatcttctc gctgctgcgc tcggccgggc agctcgacct cttcatctcg gtggcctacc
     2101 tgctgctgct ggggttcctc ggctcactga tgctgatcga ggcggtgcgc accatcgtgc
     2161 ggcggcggcg cggcatgatg gtgcgcgaga aactgccgag ccagcacacc tggatgcacg
     2221 ggctgccgct gcgcatccgg ttcaagaagt cgcggctcta tatcagcgtg ctgccggtgc
     2281 tgggcatcgg cctgttcgtc ggcgtggtcg gggccctgct ggggatcggc ggcggcttca
     2341 tcctggtgcc ggcgctggtc tacctgctgc gggtgccggg caacgtggtg atcggcacgt
     2401 cgctgctgca ggtggtcgcc atgatgtgcg tcaccaccat cctgcaggcg ctgaccagcc
     2461 agagcgtcga cgtgctgctg gcgttctgcc tgatggtggg cggcacggtc ggggcgcagt
     2521 tcggcgcatc ggccgggaag tatctgcgcg gcgaccagct gcgcgcgctg ctggcgctgc
     2581 tggtgctggc cgtcgcgatc cgcttcgggc tggccctcct gctcaggccc ggcgatgtgt
     2641 tctcgatggc ggtcctcggc ccgggaggca caggatgagg cgcgtcctgc tggcgctggt
     2701 cctgctgctc gcggcgacgc ccgccggcgc ggaaaagctc atcgccaccg tctccagcag
     2761 cagcgtcgag atcacctcga gcttcgacgg cgcggtgctg agcctgttcg gcacgatcga
     2821 gccggacacg ccgggcatcg cgctcagcgg accctacaac gtcatcgtga tcgtcaccgg
     2881 cccgctgcag gaccgggtgg cgcggctgaa gaccaacaac tggggcatct ggaccaacac
     2941 cgaccaggtc gtgttccggc aattcccatc gttctacgaa gtgctgtcga gcgggcggct
     3001 ggaccagatc gcgaccgccc agttcatcgc cgagcgcaac gtgctgccgg acagccaggc
     3061 ggtcgcggcg gcgcagagca ccggcatccg cagcgtgcag ttcggcaccg agctggtgcg
     3121 gctgatgacg agcgaggggc atttctcgct gcagcagaac ggcgtccgct tcctctccga
     3181 caccgcctac atcgcgcagg tgacgttgcc gagcgacgtc gccaacggcc cgttcctggc
     3241 gcgaacgctg gtgctcaagg accatgagct ggtggcggag ggcacctcgg gcttttcggt
     3301 gcgcaagaac gggttcgaga acttcgtgtt cgtcgccagc cggcagcagc cgctgctcta
     3361 cgggctggtg tgcgtggcgc tggcgctcgg gacggggtgg ttcgccgggg tggcgttcaa
     3421 gcgctagacg cccgccacca gccgcctggt gctcaccgga taaagccgcg agcggccgag
     3481 catggtgacc tccagcgtct cgtagctgaa gaggccgtgg aagatcggtc caaggatatt
     3541 catgctgccg gcgccggcac cgtaggcagg gagcagcagc agcttgccat cgtgcacgaa
     3601 gcagggacgg cgcgtgccgt ggccattggc gacgacggtg gccgcggggt gcaggtggcc
     3661 ggcgatcgcg gcacgcccgt tgcgcggcgg ctcgtgcaca agcgtgacgc cacggtgctc
     3721 gaggtagctg acgcagacgc cacccagcgc gtgcggcgac ggatcgtggt tgccgctgag
     3781 ccaggtccag tgcgacttgc cgagcagcgt cgcgagccgc aggcggtcgg catcgagcag
     3841 cgtttcgacg ccctcgtcgc ggtgaaaact gtcgcccagc gagacgacgc gctcggcgcg
     3901 ggtggcctcg acgtcgcgct cgaggcgctt gagggtcagc ccggtgtcgt agggcggcag
     3961 catgtggccg cggcgcgcga aggaggagaa tttctcgaga tgcaggtcgg cgacgagcag
     4021 catggattcg gcgcgccaga acagcgcgcc cgacagcagc ggctcgaaga catggccggc
     4081 aaagttgagg agcacgaccg cgtcctcagc cggccaggcg gcgcttgccg cgctgctcca
     4141 caggcttgtc atgttctaca ggcgctgccc tgcccgaata ccggcttgcg gttttcgggg
     4201 cggcgcccag agcctcccgc atcaactcgt cggcggcatc ggccatcgca ccttcgcggg
     4261 cctcgccgaa gatcggcgtc cggccgatgt ccaggaggat gggtaccgcg agcggggaga
     4321 ttcggtcgag gggcttgtgc acgatgccgt cgcggatgcg gcgcagcagc acgccgagcc
     4381 gctcgatatc gagcaggccg cgggcggcgt cgcgccgggt cgcctggatc aggatgtggt
     4441 cgggctcgtg ctcgtacagc acgtcgtaga tgatgtcgga ggagacggtg acctggcggc
     4501 cggtcttttc cttgcccggg tggcggcgct cgatgaggcc ggcgatgatg gcggcgttgc
     4561 ggaaggtgcg gcgcatcagc tggctctcgt gcagccagga ttcgaggtcg tcgccgagca
     4621 tgtcctcatc gaagagctcg gcgagcgaca gccggccggt gcggatcagg ccgccgaaat
     4681 cgcccagccc ccagatggcg agcgaatagt cggaggcgac gaagccgagc ggacgggcgc
     4741 gggcgcgttc gagccggcgg gtcagcagca tgccgagggt ctggtgcgcg aggcggccct
     4801 cgaacggata gcagacgaga tagttgagcg tgccgcgcgg aaacgtctcc accagcatcg
     4861 aatcggcggg cggcagcacc gacgcttcat gttgcaggcg cagccagtcg ctgacctggt
     4921 cgggcagcgc cgaccagttg ccgggatcgc tgaggatgcg gcgcacgccg tcggcgaggt
     4981 aggtcgacag cgggaacttg ccgcccatgt aggagggaat cttgggatcg gcggcgttgg
     5041 aacgcgagac gtaggcctcg gtctcgaaca tcccttcata ggccacgatc tcggagccga
     5101 agacgaaggt gtcgccgcgc accagctggt cgatgaaata ttcctcgagc tcgcccagca
     5161 cgcggccgta ccggccgatg ggcccggtgg ccgagccggt cttgacgcct ttgcccttga
     5221 ccagccggac cttcaccatc gggtcctcga tgatggtgcc gacattgagc cggtactgct
     5281 gcgcgatgcc gggattggcg atgcggaact tcccgtcggc ggtcttcttc agcttggcgt
     5341 agcgctcata ggcacgcagc gcgtagccgc cggtggcgac gaaatcgatg acgcgctcga
     5401 agctttccca gctcagctcg cgatacggcc aggcgcggcg cacctcgtcg tagaaggcca
     5461 gcggatcgag cggcgcggcg caggccatgc caagggtgtg ctgggccagc acgtcgaggc
     5521 cgccgagcga gggatcctcg ctgtcctggg cattgcggcc gacggcctcg agcgcggcct
     5581 cgcattcgag cacctcgaag cggttggagg gcacgaagat cgccttgctc ggctcgtcca
     5641 tgcggtgatt ggagcggccg atgcgctgca gcatgcggga ggcacccttg ggggcgccga
     5701 cctgcacgac gagatcgacg tcgccccagt cgatgccgag atcgagggtc gaggtggcga
     5761 ccacggcctg gagcttgccg gccaccatgg cgctttcgac cctgcggcgc tgttcgaccg
     5821 cgagcgagcc gtgatgcagc gcgatggcga gg
//
LOCUS       DATAZA010000586         3185 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2320582, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000586 DATAZA010000000
VERSION     DATAZA010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 3185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3185
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2320582"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..354)
                     /locus_tag="VHZ56_14485"
     CDS             complement(<1..354)
                     /locus_tag="VHZ56_14485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX4299221.1"
                     /translation="MLPAIDYLRGAGLVPDPAAIGHPLTAIRIIDGTRRLVRAPETLF
                     DSAAAGLPAFGWNFSNVRLAESFAAAHAGLDNLRTIETTLDDLEVNEDGARLTLGNGD
                     VLQAGLVVGADGKKSR"
     gene            complement(486..959)
                     /locus_tag="VHZ56_14490"
     CDS             complement(486..959)
                     /locus_tag="VHZ56_14490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6691 family protein"
                     /protein_id="HEX4299222.1"
                     /translation="MRKPLNLPSLAVAAVAGAIFGVGLYISGMVNPLKVLDFLNFKAI
                     ASGGWDPSLAFVMIPAVVVMFIAVRIGRRREKPAFDTAFHEPEYTRIDTRLVGGAALF
                     GVGWGMSGICPGPAISLIAFWPQYLPIYLLALFVGSYGGSIIIPSGREKRLALAR"
     gene            complement(959..1402)
                     /locus_tag="VHZ56_14495"
     CDS             complement(959..1402)
                     /locus_tag="VHZ56_14495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012752379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HEX4299223.1"
                     /translation="MDNFTPVPAAIGGALIGLSAAILWLGNGRIAGISGIFGQLLPPA
                     RTVIWRLVFLVCLVGGTFLAAYLLPGLGNRPATLVAAPAWFPAGTTVWIAVAGLLTGF
                     GTKIGNGCTSGHGVCGLARLSKRSFVAVGVFFVVAILTVTVTGIV"
     gene            1592..2437
                     /locus_tag="VHZ56_14500"
     CDS             1592..2437
                     /locus_tag="VHZ56_14500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEX4299224.1"
                     /translation="MLDLLLDPGTWIAFATLTVMEVVLGVDNVIFISVLVSKLPKEQS
                     DRARRIGLSLALVFRIALLLVLSAIIALAAPVFSAFGHDFSWRDIILFAGGAFLIYKA
                     VHEMHAEIEEPHAPGLQQRAKAALSAIIAQIILLDLVFSIDSIVTAIGMAQHVEVMIA
                     AVVVAVGLMFIASGPIAGFVSRHPTTKMLALAFLLLIGVSLCADGIGFHIDKGYIYAA
                     MGFAVLVEAINIFSRRRRGATAVAERTEPTRAAVVVPAETVTAPARRRHQAQSGPKSA
                     PRKKA"
     gene            2434..>3185
                     /locus_tag="VHZ56_14505"
     CDS             2434..>3185
                     /locus_tag="VHZ56_14505"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HEX4299225.1"
                     /translation="MSKAVVIHALGGPEVLTYEDHEVGRPGPGELRVRNGAIGINFID
                     VYQRTGTYKLALPFVAGSEGAGEVVEIGPGVTEFKVGDHVGYTGPVGAYAEKRLLPAA
                     RAVRLPPGISDEVAAAVLLKGGTAQYLLFDTYAVQAGQTILVHAAAGGVGSILTQWAT
                     ALGVRVLAAAGSDEKVAMAKASGAEFAFNYGTPDWVKAVREATDGKGVDAVYDGVGKA
                     TFEGSLDCLKPRGMMVSYGSASGAVSIANLGIL"
BASE COUNT          547 a         1067 c         1089 g          482 t
ORIGIN      
        1 gcgggatttc ttgccgtcgg cccccacgac gagcccggcc tgaaggacgt cgccgttacc
       61 gagggtcagc cgtgcgccat cctcgttcac ctcgaggtcg tcgagcgtgg tctcgatggt
      121 gcgaaggttg tcgaggccgg cgtgtgctgc cgcgaaggac tcggccagcc ggacgttgga
      181 gaaattccag ccgaaggcgg gaaggccggc agccgcgctg tcgaacagcg tttcgggggc
      241 gcggaccagt cgccgcgtgc cgtcgatgat ccggatagcg gtgagcgggt gaccgatcgc
      301 cgcgggatct ggaacgaggc cggcgccccg cagataatcg atggccggca gcatgagcgc
      361 cgaggtccgg cggtccggcg gcgccttggg gacaagatgg accgtcgaaa gccccgcctg
      421 cgccaccgcc accgcggcag cgagccctgc gaggccgccg ccgacgacga ccgcggttgg
      481 agtttctatc gtgccagtgc cagccgtttt tcccgcccgc ttggaatgat gatcgagcct
      541 ccatacgacc cgacgaacag ggcgagcaag tagatcggca gatattgcgg ccagaacgcg
      601 atcagcgaga tcgccggacc ggggcagatg cccgacatgc cccagcccac gccgaacagc
      661 gccgcgccgc ccaccagccg ggtatcgatg cgggtgtatt ccggctcgtg gaaggcggtg
      721 tcgaatgccg gcttttcccg ccggcggccg atccgcaccg cgatgaacat caccaccacg
      781 gccgggatca tgacgaacgc caggctcgga tcccagccgc cgctggcgat cgccttgaaa
      841 ttgaggaaat ccagcacctt gagcggattg accatgcccg agatgtagag accgacgccg
      901 aagatcgcgc cggcgacagc ggctacggcg agggagggga ggttcagcgg cttgcgcatc
      961 agacgatccc ggtgacggtg acggtgagga tggcgacgac gaagaacacg ccgaccgcga
     1021 cgaacgagcg cttcgacagc cgcgccagcc cgcacacgcc gtggcccgag gtgcagccat
     1081 tgccgatctt ggtgccgaat ccggtgagca agcccgcaac cgcgatccag accgtcgttc
     1141 cggcggggaa ccaggccggc gccgcgacca gcgtcgcggg acgattgccg aggccgggca
     1201 gcaggtacgc cgcgaggaat gttccgccga cgaggcagac caggaagacc agccgccaga
     1261 tcacggtgcg ggcaggcggc agcaactggc cgaagatccc ggaaatgccg gcgatccggc
     1321 cattgccgag ccacaggatg gcggctgaaa gcccgatcag cgcgccgccg atcgcggccg
     1381 gcaccggggt gaaattgtcc atgacggact ccatcagact gaggccgaag tttatcaccc
     1441 gcgaatctcc ctaaccagcg gaggcgtaag gcaaatattc tgcgcggaag ccggctggcg
     1501 aaaagctcga ctgccgaatt cgtcggccgc gagacttcca accccggccg gccgcaccta
     1561 gattgaccgc accgtcccgc cggagacccc gatgctcgac ctgctgctcg accccggcac
     1621 ctggatcgca ttcgccaccc tgaccgtgat ggaggtggtg ctcggcgtcg acaacgtcat
     1681 cttcatctcg gtgctggttt ctaaactgcc caaggagcag tcggaccgcg cccgtcgcat
     1741 cggcctcagc ctcgcgctcg tcttccgcat cgcgctgctg ctggtgctga gcgccatcat
     1801 cgccctggcg gcaccggtgt tcagcgcctt cggccacgat ttctcctggc gcgacatcat
     1861 cctgttcgct ggcggtgctt tcctcatcta caaggcggtg cacgagatgc atgccgagat
     1921 cgaggagccg catgcccccg gcctgcagca gcgggcgaaa gccgcgctct cggcgatcat
     1981 cgcccagatc atcctgctcg acctggtgtt ctcgatcgac tcgatcgtca ccgccatcgg
     2041 catggcgcag catgtcgagg tgatgatcgc ggccgtggtg gtggcggtgg ggctgatgtt
     2101 catcgcctcg ggcccgattg ccgggttcgt gtcgcgccat ccgaccacca agatgctggc
     2161 gctggcgttc ctgctgctga tcggcgtgtc gctatgcgcc gacggcatcg gcttccatat
     2221 cgacaagggc tacatctatg ccgcgatggg ctttgcggtg ctggtcgagg ctatcaatat
     2281 cttctcgcgc cggcggcgcg gggcgacggc cgtcgctgaa cgcacggaac ccacgcgggc
     2341 agcggtggtt gtgcccgccg agaccgtgac ggcaccggcc cggcgcagac accaggcgca
     2401 gtctggccca aaatcggcac caaggaagaa agcatgagca aggccgttgt catccacgcg
     2461 ctcggcgggc ccgaggtgtt gacctatgag gaccacgagg tcggccggcc cggccccggc
     2521 gagctgcggg ttcgcaacgg cgccatcggc atcaacttca tcgacgtcta ccagcgcacc
     2581 ggcacctaca agctcgccct gccgttcgtc gccggcagcg agggggcagg ggaggtggtc
     2641 gaaatcggcc ccggcgtcac cgagttcaag gtcggcgacc acgtcggcta caccggcccg
     2701 gtcggtgcct atgccgagaa gcggctgctg ccggcggcac gcgcggtccg gctgccaccg
     2761 gggatcagcg acgaggtcgc cgcagcggtg ctgctcaagg ggggcaccgc gcagtacctg
     2821 ctgttcgaca cttacgcggt gcaggccggg cagaccattc tcgtccacgc ggccgcgggc
     2881 ggcgtcggtt ccatcctgac gcaatgggcg accgcgctcg gcgtgcgcgt cctcgccgcg
     2941 gccggttcgg acgagaaggt cgcgatggcg aaagcctccg gcgccgagtt cgcgttcaac
     3001 tacggcactc ccgactgggt caaggcggtg cgcgaggcga ccgacggcaa gggggtcgac
     3061 gcggtctatg acggcgtcgg caaggcgacg ttcgaaggct cgctcgattg cctcaagccg
     3121 cgcggcatga tggtgagcta tggcagcgcc tcgggcgccg tcagcatcgc caatctcggc
     3181 atcct
//
LOCUS       DATAZA010000587         1580 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_812290, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000587 DATAZA010000000
VERSION     DATAZA010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_812290"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            35..1519
                     /gene="gatA"
                     /locus_tag="VHZ56_14510"
     CDS             35..1519
                     /gene="gatA"
                     /locus_tag="VHZ56_14510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018010735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEX4299226.1"
                     /translation="MTDLTTLSLAVARKGLTGKSFSSLELTDAYLGAIEAANPKLNAY
                     VAVTADRARAMAMASDEKLKAGQGGALEGIPLGIKDLFATQGAHTQAASHVLDGFKPE
                     YESTVTSRLWRDGAVMLGKLNMDEFAMGSSNETSFYGPVINPWRSAGSNAQLVPGGSS
                     GGSAAAVSARLCVAATATDTGGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQA
                     GPIARTVEDAAILLGSMAGFDPRDSTSVELAVPDFAAAVERGVKGLTIGIPKEYRMDG
                     MPAEIEALWQQGIAWLTAEGATVRNISLPHTRYALPAYYIVAPAEASSNLARYDGVKY
                     GLRVSGKDITDMYELTRARGFGPEVRRRLMIGTYVLSAGYYDAYYVRAQQVRTLIKRD
                     FETAFADGVDAILTPATPSAAFGVGDEDMQADPVKMYLNDVFTVTVNMAGLPGIAVPA
                     GKDASGLPLGLQLIGKPFDEETLFAAARVIERSAATDFSPAKWW"
BASE COUNT          252 a          560 c          522 g          246 t
ORIGIN      
        1 gacccttcct gccacatccc gtgagccgcc ttccttgacc gacctcacca cgctgtcact
       61 tgccgttgcc cgcaagggac tgaccggcaa gagcttttca tccctcgagc tgaccgacgc
      121 ctatctcggg gcgatcgagg cggccaatcc caagctcaac gcctacgtgg cggtcactgc
      181 cgaccgggcg cgggcgatgg ccatggcgtc cgacgagaag ctcaaggccg ggcagggcgg
      241 ggcgctggaa ggcattccgc tcggcatcaa ggacctgttc gcgacccagg gtgcccatac
      301 ccaggcggcg agccacgtcc tcgacggctt caagcccgag tacgagtcca ccgtgaccag
      361 ccggctctgg cgcgacggcg cggtaatgct cggcaagctc aacatggacg agttcgccat
      421 gggctcgtcc aacgagacgt cgttttacgg cccggtgatc aatccctggc gctcggccgg
      481 cagcaatgcg cagctggtgc cgggcggctc ctccggcggc tcggcggcag cggtcagcgc
      541 ccggctgtgc gtcgccgcca ccgccaccga caccggcggc tcgatccgcc agccggcggc
      601 cttcacgggc accgtcggca tcaagccgac ctacggccgc tgctcgcgct ggggcatcgt
      661 cgccttcgcc tcctcgctcg accaggccgg gccgatcgcc cgcaccgtcg aggatgcggc
      721 gatcctgctc ggctcgatgg ccgggttcga ccccagggat tcgaccagcg tcgagctcgc
      781 cgtgcccgac ttcgccgcgg ccgtcgaacg cggcgtcaag gggctgacga tcggcattcc
      841 gaaggaatac cggatggacg gcatgccggc cgagatcgag gcgctgtggc agcagggcat
      901 cgcctggctg acggcggagg gcgccacggt gcgcaacatc tcgctgccac acaccagata
      961 cgcgctgccg gcctattata tcgtggcgcc ggccgaggcc tcgtccaacc tggcccgtta
     1021 tgacggcgtc aagtacggcc tgcgcgtctc cggcaaggac atcaccgaca tgtacgagct
     1081 gacccgcgcc agggggttcg gccccgaggt ccggcgtcga ttgatgatcg gcacatatgt
     1141 gctttcggcc ggctattacg acgcctatta cgtgcgcgcg cagcaggttc gcacgctgat
     1201 caagcgcgac ttcgagacgg cgttcgcgga cggcgtcgac gccatcctga cgccggcgac
     1261 gccatcggcg gcattcggcg tcggcgacga ggacatgcag gccgacccgg tgaagatgta
     1321 tctcaacgac gtcttcaccg tgaccgtcaa catggccggg ctgccgggta tcgccgtgcc
     1381 ggccggcaag gacgcgtcgg gcctgccgct cggcctgcag ctcatcggca agccgttcga
     1441 cgaggagacg ctgttcgccg ccgcccgcgt catcgagcgc tccgccgcga ccgatttctc
     1501 gccggcgaaa tggtggtgac gatggccgac gacatctttt cgaccgccga ctggcgcgac
     1561 gtgcccaagg acatgtcgaa
//
LOCUS       DATAZA010000588         1624 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Devosia sp. isolate SMAG_U5693 k141_2901188, whole
            genome shotgun sequence.
ACCESSION   DATAZA010000588 DATAZA010000000
VERSION     DATAZA010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956514
            Sequence Read Archive: SRR11836440
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Devosia sp. (soil metagenome)
  ORGANISM  Devosia sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Devosiaceae; Devosia.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,861
            Genes (coding)                    :: 2,849
            CDSs (with protein)               :: 2,849
            Genes (RNA)                       :: 43
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 2 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Devosia sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2901188"
                     /isolate="SMAG_U5693"
                     /isolation_source="soil"
                     /db_xref="taxon:1871048"
                     /environmental_sample
                     /country="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..661)
                     /gene="ccmA"
                     /locus_tag="VHZ56_14515"
     CDS             complement(26..661)
                     /gene="ccmA"
                     /locus_tag="VHZ56_14515"
                     /EC_number="7.6.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015439 - ABC-type heme transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC exporter ATP-binding protein CcmA"
                     /protein_id="HEX4299227.1"
                     /translation="MIPPNQRPPPLLRVEGLALTRGGRLLFEAVGFHLSNGEMMLVRG
                     PNGAGKSSLLLVVAGLLRPDSGLIEWLGGEPPGMHLFGHAPGIKPRLTLAENLGFWRN
                     LYGPTGVAPKIALATVGLGGLDGIEAGHLSAGQLRRLGLARLLVSKRPVWILDEPVAS
                     LDAEGEKLVSELLKAHLSAGGAAIVATHHDIPIYFYSQPTLWMTLRLGPKP"
     gene            827..>1624
                     /locus_tag="VHZ56_14520"
     CDS             827..>1624
                     /locus_tag="VHZ56_14520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008528124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HEX4299228.1"
                     /translation="MTQSLDSFKSKTTLAVGDKTYSYFSIPLAEKNGLPGVSKLPHSM
                     KVVLENLLRFEDGVTVTRADILAIADWLKTRTSEHEISYRPARVLMQDFTGVPAVVDL
                     AAMRDATAKLGADPQKINPLVPVDLVIDHSVMVDSFGSPLSFHQNVELEYERNGERYE
                     FLRWGQNAFDNFRVVPPGTGICHQVNLEYLAQTVWTRKDAESGEMIAYPDTLVGTDSH
                     TTMINGLAVLGWGVGGIEAEAAMLGQPITMLIPEVVGFKMTGRINEGI"
BASE COUNT          293 a          532 c          542 g          257 t
ORIGIN      
        1 cggccgatca gggcgaggaa agccctcatg gcttcggtcc caggcgcagc gtcatccaga
       61 gcgtcggctg cgaatagaaa tagatcggaa tgtcgtgatg ggtggcaacg atcgccgcgc
      121 cgccggccga aaggtgggcc ttgagcagtt ccgacaccag cttttcgccc tcggcatcga
      181 gcgaggcgac gggttcgtcg aggatccaga ccggccgctt gctgaccagc agccgggcga
      241 ggccgagccg gcgcagctgg ccggccgaca gatggccggc ctcgatgccg tcgagcccgc
      301 caaggccgac cgttgccagc gcgatcttgg gcgcgactcc tgtcgggcca tagaggttgc
      361 gccagaatcc gaggttttcg gcgagcgtca gccggggctt gatgccgggg gcatggccga
      421 acaggtgcat ccctggcggt tcgccgccaa gccactcgat gaggccggaa tccggacgca
      481 aaagcccggc gacgaccagc agcaggctcg atttgccggc gccgttgggg ccccggacca
      541 gcatcatctc gccgttggag agatggaagc ccacagcctc gaacagcagg cggccgccac
      601 gggtcagcgc cagtccttcg acgcgcagca ggggaggtgg gcgttggttc ggcgggatca
      661 tgcggacatg cctattcatc cgttgtccgc actggcaagc ggcatgttga ttgactataa
      721 gccggtcaaa gtctggagcg cttccagact gagcgccccc ggtccccctt ggccctcaag
      781 cgtcgggact gccgaggtgc ccctgaacct tttgacaggc ggaccggtga cccaatcgct
      841 cgacagcttc aagtccaaga ccacgcttgc ggtcggggac aagacctaca gctatttctc
      901 catcccgctg gccgaaaaga acggcctgcc gggggtgtcg aagctgccgc actcgatgaa
      961 ggtggtgctg gagaatttgc tgcgcttcga ggacggggtc accgtcaccc gggccgacat
     1021 cctcgccatc gccgactggc tgaagacccg cacctccgag cacgagattt cgtaccggcc
     1081 ggcgcgcgtg ctgatgcagg atttcaccgg cgtccccgcc gtggtcgacc tcgcggcgat
     1141 gcgcgacgcc accgccaagc tcggcgccga tccgcagaag atcaacccgc tggtgccggt
     1201 cgacctggtc atcgaccact cggtgatggt ggattcgttc ggctcgccgc tgagcttcca
     1261 ccagaacgtc gagctcgaat acgagcgcaa tggcgagcgc tacgaattcc tgcgctgggg
     1321 ccagaacgcc ttcgacaatt tccgcgtcgt gccgcccggc accggcatct gccaccaggt
     1381 caacctcgag tacctggcgc agacggtgtg gacccgcaag gacgccgaga gcggcgagat
     1441 gatcgcctat cccgatacgc tggtgggcac cgacagccac accacgatga tcaacggcct
     1501 cgcggtgctg ggctggggcg tcggcggcat cgaggccgag gcggcgatgc tgggccagcc
     1561 gatcaccatg ctgatcccgg aagtcgtcgg cttcaagatg accggccgga tcaacgaggg
     1621 catc
//
